BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= lgn_170095 (484 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g78620.1 144 1e-63 At5g19930.1 35 0.001 At1g08080.1 28 3.3 At3g11150.1 28 3.3 At3g45040.1 27 5.5 At4g05505.1 27 5.5 At3g51580.1 27 5.5 At1g27210.1 27 7.2 At1g35530.1 26 9.5 At2g47600.1 26 9.5 >At1g78620.1 Length = 334 Score = 144 bits (363), Expect(2) = 1e-63 Identities = 73/92 (79%), Positives = 79/92 (85%) Frame = +3 Query: 3 LGTLTWRAFGSSGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAG 182 LGTLTWRA+GS+GFLLVA YFVIGTAATKVKM QKEAQGVAEKRKGRRGP SVIGSSAAG Sbjct: 119 LGTLTWRAYGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAAG 178 Query: 183 CVCAFLSITTVGGEAFTRLWELAICSQFLYQV 278 CVCAFLSI VGG AF++L+ L S F +V Sbjct: 179 CVCAFLSIYQVGGAAFSQLFRLGFVSSFCTKV 210 Score = 115 bits (289), Expect(2) = 1e-63 Identities = 58/77 (75%), Positives = 65/77 (84%) Frame = +1 Query: 253 FVASFCTKLSDTVSSEIGKAYGKTTYLVTSFKVVPRGTERAVSAEGTLAGLLASVLLAFV 432 FV+SFCTK+SDTVSSEIGKAYGKTTYL T+FK+VPRGTE A+S EGTLAGLLAS LA V Sbjct: 202 FVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTEGAMSLEGTLAGLLASFFLASV 261 Query: 433 GYLKGQINVPGAAICVV 483 G GQI P AA+CV+ Sbjct: 262 GCFLGQITPPEAAVCVL 278 >At5g19930.1 Length = 289 Score = 34.7 bits (78), Expect(2) = 0.001 Identities = 20/55 (36%), Positives = 27/55 (49%) Frame = +1 Query: 283 DTVSSEIGKAYGKTTYLVTSFKVVPRGTERAVSAEGTLAGLLASVLLAFVGYLKG 447 DT SSE+G L+T+FK V +GT V+ G LA L A + + G Sbjct: 141 DTWSSELGVLSDAQPRLITTFKPVKKGTNGGVTKAGLLAALAAGTTVGLTFLIFG 195 Score = 23.9 bits (50), Expect(2) = 0.001 Identities = 15/57 (26%), Positives = 25/57 (43%) Frame = +3 Query: 48 LVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSITTVG 218 L+ +F+ + TKV +K V K G+R V+ +S V ++ T G Sbjct: 54 LLLVFFLTSSKLTKVGEDKKRRVDVEFKEGGQRNWVQVLCNSGIASVLVVIACTLTG 110 >At1g08080.1 Length = 276 Score = 27.7 bits (60), Expect = 3.3 Identities = 11/38 (28%), Positives = 21/38 (55%) Frame = +3 Query: 48 LVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSV 161 +V + IG A T ++ +KE +G+AE + + G + Sbjct: 161 VVTVLYKIGRADTFIRSLEKELEGIAEMEEAEKNVGMI 198 >At3g11150.1 Length = 372 Score = 27.7 bits (60), Expect = 3.3 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -2 Query: 321 FTICLSYLARDSITQLGTETGYKSLVPTVE 232 F +CL Y R+ L TE+G+ S++P V+ Sbjct: 222 FVVCLQYQIREQKYCLLTESGWVSVLPRVD 251 >At3g45040.1 Length = 570 Score = 26.9 bits (58), Expect = 5.5 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = +1 Query: 277 LSDTVSSEIGKAYGKTTYLVTSFKVVPRGTERAVSAEGTLAGLLASVLLAFV 432 + DT++S +G YG + T K V EGT AG+ + + + FV Sbjct: 477 IGDTMASMVGHKYGVLRWSKTGKKTV----------EGTAAGITSMMAVCFV 518 >At4g05505.1 Length = 451 Score = 26.9 bits (58), Expect = 5.5 Identities = 31/104 (29%), Positives = 39/104 (37%), Gaps = 1/104 (0%) Frame = -1 Query: 445 PLDNQQKQGELKQEAQLRFPQ-HSQPFQYPEALP*MR*QDT*FYHMPFLSRSRQYHSTWY 269 P +Q + E K A R P H +++ + QD F H P S ST Sbjct: 22 PTSSQPVRVEPKTRASNRRPSGHPSHYEFTLVIRPAPLQD--FEHHPTAQPSTASGSTQP 79 Query: 268 RNWLQIASSHSRVNASPPTVVIDKNAQTQPAALEPITLPGPLLP 137 R+ + S SP V KNA Q AL PLLP Sbjct: 80 RSGGSVHRLASTARQSPAAV--HKNASNQSIALVQREASNPLLP 121 >At3g51580.1 Length = 391 Score = 26.9 bits (58), Expect = 5.5 Identities = 12/39 (30%), Positives = 19/39 (48%) Frame = -1 Query: 253 IASSHSRVNASPPTVVIDKNAQTQPAALEPITLPGPLLP 137 I S V +S PT+ + T P + ++ P PL+P Sbjct: 54 IGDGKSNVTSSEPTLPTSNSTNTNPKEPDSMSPPPPLIP 92 >At1g27210.1 Length = 626 Score = 26.6 bits (57), Expect = 7.2 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = -1 Query: 247 SSHSRVNASPPTVVIDKNAQTQPAALEPITLP 152 S H R ASPP + ++ T P++ P T P Sbjct: 2 SVHGRFPASPPISLSPSSSSTSPSSQSPSTPP 33 >At1g35530.1 Length = 1325 Score = 26.2 bits (56), Expect = 9.5 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -1 Query: 424 QGELKQEAQLRFPQHSQPFQYPEAL 350 QGE +E L FPQ S P ++ L Sbjct: 896 QGEANREEDLEFPQLSSPMRFSNEL 920 >At2g47600.1 Length = 540 Score = 26.2 bits (56), Expect = 9.5 Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 1/36 (2%) Frame = +3 Query: 72 GTAATKVKMAQKEA-QGVAEKRKGRRGPGSVIGSSA 176 GT+ ++ +A +A + + E+ G GPG+++GS+A Sbjct: 107 GTSFPQISLATIDAIRNMGERYAGGLGPGTLVGSAA 142 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,156,808 Number of Sequences: 28581 Number of extensions: 161742 Number of successful extensions: 488 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 473 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 488 length of database: 12,141,370 effective HSP length: 92 effective length of database: 9,511,918 effective search space used: 646810424 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= cangn_204435 (520 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g78620.1 270 3e-73 At5g19930.1 42 1e-04 At5g12860.1 31 0.44 At2g25050.1 30 0.58 At1g08080.1 28 2.9 At2g28050.1 28 2.9 At3g26990.1 28 3.8 At1g27210.1 27 4.9 At4g27520.1 27 4.9 At1g63450.1 27 6.4 At2g02515.1 27 6.4 At5g08520.1 27 8.4 At3g16140.1 27 8.4 At3g45040.1 27 8.4 >At1g78620.1 Length = 334 Score = 270 bits (690), Expect = 3e-73 Identities = 137/172 (79%), Positives = 151/172 (87%) Frame = +1 Query: 1 LTWRAFGSSGFLLVAMYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVC 180 LTWRA+GS+GFLLVA YFVIGTAATKVKM QKEAQGVAEKRKGRRGP SVIGSSAAGCVC Sbjct: 122 LTWRAYGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAAGCVC 181 Query: 181 AFLSINGVGGEAFTRLWELAFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEG 360 AFLSI VGG AF++L+ L FV+SFCTK+SDTVSSEIGKAYGKTTYL TTFK+VPRGTEG Sbjct: 182 AFLSIYQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTEG 241 Query: 361 AVSAEGTFAGFLASVLLASFGFLTGQISIPGAAICVIAAQIANFGESLIGAS 516 A+S EGT AG LAS LAS G GQI+ P AA+CV+A+QIAN GES+IGAS Sbjct: 242 AMSLEGTLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGAS 293 >At5g19930.1 Length = 289 Score = 42.4 bits (98), Expect = 1e-04 Identities = 44/182 (24%), Positives = 71/182 (39%), Gaps = 21/182 (11%) Frame = +1 Query: 37 LVAMYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSINGVG--- 207 L+ ++F+ + TKV +K V K G+R V+ +S V ++ G Sbjct: 54 LLLVFFLTSSKLTKVGEDKKRRVDVEFKEGGQRNWVQVLCNSGIASVLVVIACTLTGWKD 113 Query: 208 -------GEAFTRLWELAFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAV 366 E T L + + DT SSE+G L+TTFK V +GT G V Sbjct: 114 KCLDSKQSEIVTALIG-GIIGHYACCNGDTWSSELGVLSDAQPRLITTFKPVKKGTNGGV 172 Query: 367 SAEGTFAGFLASVLLA----SFGFLTGQISIPGA-------AICVIAAQIANFGESLIGA 513 + G A A + FG T + A + +A + +S++GA Sbjct: 173 TKAGLLAALAAGTTVGLTFLIFGLFTASCASDVALKQLLVIPLSALAGLCGSLIDSILGA 232 Query: 514 SL 519 ++ Sbjct: 233 TI 234 >At5g12860.1 Length = 558 Score = 30.8 bits (68), Expect = 0.44 Identities = 19/58 (32%), Positives = 32/58 (55%) Frame = -3 Query: 323 TRYVVLPYAFPISLETVSLNLVQKLATNASSHKRVNASPPTPLIDKNAQTQPAALEPI 150 +R+ +L P+SL S LV+ +T AS+ ++SP PL+ Q AA++P+ Sbjct: 42 SRFSLLKSPLPVSLRRRSSTLVKASSTVASA----SSSPTPPLVPAPVPWQGAAIKPL 95 >At2g25050.1 Length = 1111 Score = 30.4 bits (67), Expect = 0.58 Identities = 26/105 (24%), Positives = 43/105 (40%) Frame = -3 Query: 422 PKEARRTEARNPAKVPSALTAPSVPRGTTLNVVTRYVVLPYAFPISLETVSLNLVQKLAT 243 P+ + P +A+T+ +P L +++R P PIS +L + Sbjct: 536 PQSPTPVHSNGPPSAEAAVTSSPLPPLKPLRILSRPPPPPPPPPIS------SLRSTPSP 589 Query: 242 NASSHKRVNASPPTPLIDKNAQTQPAALEPITLPGPLLPFLFSAT 108 +++S+ PP P Q+ +AL LP PL P AT Sbjct: 590 SSTSNSIATQGPPPPPPPPPLQSHRSALSSSPLPPPLPPKKLLAT 634 >At1g08080.1 Length = 276 Score = 28.1 bits (61), Expect = 2.9 Identities = 11/38 (28%), Positives = 22/38 (57%) Frame = +1 Query: 37 LVAMYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSV 150 +V + + IG A T ++ +KE +G+AE + + G + Sbjct: 161 VVTVLYKIGRADTFIRSLEKELEGIAEMEEAEKNVGMI 198 >At2g28050.1 Length = 463 Score = 28.1 bits (61), Expect = 2.9 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = -3 Query: 260 VQKLATNASSHKRVNASPPTPLIDKNAQT 174 + KL N+SS + ASP TPL D N T Sbjct: 21 IYKLLLNSSSINQTLASPETPLSDLNLST 49 >At3g26990.1 Length = 514 Score = 27.7 bits (60), Expect = 3.8 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = -3 Query: 257 QKLATNASSHKRVNASPPTPLIDKNAQTQPAALEPITLPGPL 132 Q AT +SS PP P Q QP L+P+ PGP+ Sbjct: 409 QNTATTSSSTPPQPLPPPPPF-----QLQPQFLQPLQPPGPV 445 >At1g27210.1 Length = 626 Score = 27.3 bits (59), Expect = 4.9 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -3 Query: 236 SSHKRVNASPPTPLIDKNAQTQPAALEPITLP 141 S H R ASPP L ++ T P++ P T P Sbjct: 2 SVHGRFPASPPISLSPSSSSTSPSSQSPSTPP 33 >At4g27520.1 Length = 350 Score = 27.3 bits (59), Expect = 4.9 Identities = 31/137 (22%), Positives = 49/137 (35%), Gaps = 12/137 (8%) Frame = -3 Query: 500 LSPKFAICAAITHIAAPGILI*-PVRKPKEARRTEARNPAKVPSALTAPSVPRGTTLNVV 324 +S + A H AAPG + P A ++ +P ++ + P G + Sbjct: 129 ISARIPSTAQSPHAAAPGSSTPGSMTPPGGAHSPKSSSPVSPTTSPPGSTTPPGGAHSPK 188 Query: 323 TRYVVLPYAFPISL----------ETVSLNLVQKLATNASSHKRVNASPPTPLIDKNAQT 174 + V P P T S K + S SPP P+ K++ T Sbjct: 189 SSSAVSPATSPPGSMAPKSGSPVSPTTSPPAPPKSTSPVSPSSAPMTSPPAPMAPKSSST 248 Query: 173 QPAALEPITL-PGPLLP 126 P + P+T PG + P Sbjct: 249 IPPSSAPMTSPPGSMAP 265 >At1g63450.1 Length = 642 Score = 26.9 bits (58), Expect = 6.4 Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 6/100 (6%) Frame = -3 Query: 431 VRKPKEARRTEARNPAKVPSALTAPSVPRGTTLNVVTRYVVLPYAFPISLETVSLNLVQK 252 +R+P+ +++TE NP K PR N+ + + + + + L + L L+ Sbjct: 8 LRRPRTSKKTETGNPEKTLKD------PRTCCNNLFSIFSARSFLYRVPLTILFLFLIYL 61 Query: 251 LATNAS------SHKRVNASPPTPLIDKNAQTQPAALEPI 150 +T+ + H +++ T L A +QPA P+ Sbjct: 62 WSTSTTVISGNVVHICISSRKLTDLYCLTAGSQPALRAPV 101 >At2g02515.1 Length = 92 Score = 26.9 bits (58), Expect = 6.4 Identities = 14/48 (29%), Positives = 22/48 (45%) Frame = -3 Query: 434 PVRKPKEARRTEARNPAKVPSALTAPSVPRGTTLNVVTRYVVLPYAFP 291 P KPK ++ NP +P+ P P + V ++ V+PY P Sbjct: 33 PTLKPKFQIDSKPFNPPVIPTEPFPPPPPNHDAMISVQQFPVIPYCPP 80 >At5g08520.1 Length = 299 Score = 26.6 bits (57), Expect = 8.4 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Frame = -3 Query: 242 NASSHKRVNASPP-TPLIDKNAQTQPAALEPITLPGP 135 N S+ + V+ +PP P+ A QPA P+ LP P Sbjct: 223 NKSAKQAVSQAPPGPPMYGTPAIGQPAVGTPVNLPAP 259 >At3g16140.1 Length = 146 Score = 26.6 bits (57), Expect = 8.4 Identities = 22/68 (32%), Positives = 30/68 (44%) Frame = -3 Query: 212 SPPTPLIDKNAQTQPAALEPITLPGPLLPFLFSATP*ASF*AIFTLVAAVPITKYIATRR 33 SP PL K +T A P T G LL FL ++ T V+A + + +R Sbjct: 80 SPYNPLQSKFFETFAA---PFTKRGLLLKFLILGGG-----SLLTYVSATSTGEVLPIKR 131 Query: 32 NPEEPKAL 9 P+EP L Sbjct: 132 GPQEPPKL 139 >At3g45040.1 Length = 570 Score = 26.6 bits (57), Expect = 8.4 Identities = 22/90 (24%), Positives = 33/90 (36%) Frame = +1 Query: 169 GCVCAFLSINGVGGEAFTRLWELAFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPR 348 GC +G A + F + DT++S +G YG + T K V Sbjct: 450 GCALPIWMSSGFNDRALS-----PFAGILSLGIGDTMASMVGHKYGVLRWSKTGKKTVEG 504 Query: 349 GTEGAVSAEGTFAGFLASVLLASFGFLTGQ 438 G S F+ +LAS G++ Q Sbjct: 505 TAAGITSMMAVC--FVLVPILASMGYILSQ 532 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,267,523 Number of Sequences: 28581 Number of extensions: 163473 Number of successful extensions: 628 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 601 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 626 length of database: 12,141,370 effective HSP length: 93 effective length of database: 9,483,337 effective search space used: 749183623 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= cgn_128161 (567 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g78620.1 140 6e-34 At5g61130.1 28 3.4 At5g40380.1 28 3.4 At1g49890.1 28 4.5 At4g00700.1 27 5.8 At4g12470.1 27 5.8 At3g09620.1 27 7.6 At3g46080.1 27 7.6 At1g08080.1 27 7.6 At1g48500.1 27 7.6 At4g39750.1 27 9.9 At3g03710.1 27 9.9 At3g20920.1 27 9.9 >At1g78620.1 Length = 334 Score = 140 bits (352), Expect = 6e-34 Identities = 72/109 (66%), Positives = 84/109 (77%) Frame = +2 Query: 239 AAATDLSLVQQAMKLVQSSPPTWQXXXXXXXXXXXXXXEILVSGLSLSGIAAAFLLGTLT 418 AAA+ ++ +AMKL+QS+ PTW+ +LV+GLS SGIAAAFLLGTLT Sbjct: 64 AAASMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLGTLT 123 Query: 419 WRAFGPSGFFLVASYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVI 565 WRA+G +GF LVA+YFVIGTAATKVKM QKEAQGVAEKRKGRRGP SVI Sbjct: 124 WRAYGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRGPRSVI 172 >At5g61130.1 Length = 202 Score = 28.1 bits (61), Expect = 3.4 Identities = 24/78 (30%), Positives = 31/78 (39%) Frame = +1 Query: 106 STVPSPSKTQNHSMPNSSPNTL*TLYFLPESQTKNAQKNAYQGVSCGHRSKPSTTGNEIG 285 ST +P T P SP T LP S T + G S TTG I Sbjct: 114 STTVTPGTTN----PKGSPTTT----TLPGSGTNSPYSGNPTNGVFGGNSTGGTTGTGIN 165 Query: 286 PIFTTNMAIFSAE*SPNL 339 P +TT+ + F+ + S L Sbjct: 166 PDYTTDSSAFALKNSSKL 183 >At5g40380.1 Length = 630 Score = 28.1 bits (61), Expect = 3.4 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = +1 Query: 175 TLYFLPE-SQTKNAQKNAYQGVSCGHRSKPSTTGNEIGPIFTTNM 306 + +FLP S + + Q+ G+ CG RSK S N I P F +M Sbjct: 18 SFFFLPFLSSSSDDQRTTVSGLFCGGRSKSSADPNYI-PTFVEDM 61 >At1g49890.1 Length = 660 Score = 27.7 bits (60), Expect = 4.5 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = +1 Query: 91 IITTISTVPSPSKTQNHSMPNSSPNTL*TLYFLPE-SQTKNAQKNAYQGVSCGHRSKPST 267 I+ T PSPS + S NS+ N++ T LP+ SQ+ + ++ + V+ G +T Sbjct: 74 ILRTSKRYPSPSPLLSRSTTNSASNSIKTPSLLPKRSQSVDRRRPSAVSVTVGTEMSAAT 133 >At4g00700.1 Length = 1007 Score = 27.3 bits (59), Expect = 5.8 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = +2 Query: 131 PKIT-ACPTHLPIPFKPSTFSLNPKPKTPKKMLTRGLAAATD 253 P +T + PT P+P P +S +P+ + K ++T + ATD Sbjct: 133 PSVTPSVPT--PVPESPQAYSPSPRKEHVKSLITADASMATD 172 >At4g12470.1 Length = 162 Score = 27.3 bits (59), Expect = 5.8 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +2 Query: 128 KPKITACPTHLPIPFKPSTFSLNPKPKTPKK 220 KPK CP P +PS S NP+P TP + Sbjct: 43 KPKPVQCPP----PPRPSVPSPNPRPVTPPR 69 >At3g09620.1 Length = 990 Score = 26.9 bits (58), Expect = 7.6 Identities = 15/57 (26%), Positives = 26/57 (45%) Frame = -1 Query: 459 EATRKNPDGPKARHVRVPSKKAAAMPDRDKPETRISMPRMKIRRLLSREDCHVGGED 289 ++ R+ D + R R + DR++ E R K ++ SREDC+ +D Sbjct: 65 DSKRRGEDKGRGRRERDRDRGKYLKRDRERREREKEKGRKKQKKERSREDCNEESDD 121 >At3g46080.1 Length = 165 Score = 26.9 bits (58), Expect = 7.6 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = +1 Query: 133 QNHSMPNSSPNTL*TLYFLPESQTKNAQKNAYQG--VSC 243 + H +SP TL T FLPE+ T K + G V+C Sbjct: 105 RRHRSEKASPGTLVTRSFLPETTTVTTLKKSSSGKRVAC 143 >At1g08080.1 Length = 276 Score = 26.9 bits (58), Expect = 7.6 Identities = 11/38 (28%), Positives = 21/38 (55%) Frame = +2 Query: 449 LVASYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSV 562 +V + IG A T ++ +KE +G+AE + + G + Sbjct: 161 VVTVLYKIGRADTFIRSLEKELEGIAEMEEAEKNVGMI 198 >At1g48500.1 Length = 286 Score = 26.9 bits (58), Expect = 7.6 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Frame = +1 Query: 115 PSPSKTQNHSMPNSSPNTL*TLYFLPE-----SQTKNAQKNAYQGV 237 P P K +HS+P + P T+ FLP S+T+++ N G+ Sbjct: 161 PKPQKLVHHSLPTTDPPTM-PPSFLPSISYIVSETRSSGSNGVTGL 205 >At4g39750.1 Length = 147 Score = 26.6 bits (57), Expect = 9.9 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 14/76 (18%) Frame = +2 Query: 122 PQKPK--------ITACPTHLPIPFKP------STFSLNPKPKTPKKMLTRGLAAATDLS 259 PQK K + C H+ + P S F+L+ PK+ K R +A+ T+ Sbjct: 8 PQKKKQPWLPDYIVENCLAHISRSYYPKLSLVSSPFALSSYPKSSTK---RDIASTTEEY 64 Query: 260 LVQQAMKLVQSSPPTW 307 ++L +S PTW Sbjct: 65 FFHVCLQLPKSPLPTW 80 >At3g03710.1 Length = 923 Score = 26.6 bits (57), Expect = 9.9 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%) Frame = +1 Query: 403 AWHSHMARFWPIRVLPCCFI--FCYWHCCNKGENGSKGGSRSC 525 A HS +FWP+R C F +H GE S GG + C Sbjct: 8 ALHSSTPQFWPLRRSKLCRSRNFPRFH---SGERSSGGGGKLC 47 >At3g20920.1 Length = 366 Score = 26.6 bits (57), Expect = 9.9 Identities = 9/26 (34%), Positives = 13/26 (50%) Frame = +1 Query: 406 WHSHMARFWPIRVLPCCFIFCYWHCC 483 W + ++ FWP+ L C Y H C Sbjct: 161 WQTLLSFFWPVLTLAICLFPVYPHRC 186 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,829,111 Number of Sequences: 28581 Number of extensions: 247859 Number of successful extensions: 863 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 824 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 863 length of database: 12,141,370 effective HSP length: 94 effective length of database: 9,454,756 effective search space used: 888747064 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) BLASTX 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= At1g78620.1 (1002 letters) Database: ../database/ATH1_pep_20030417 28,581 sequences; 12,141,370 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g78620.1 542 e-154 At5g19930.1 49 6e-06 At2g39870.1 30 2.9 At3g53570.1 28 6.4 At1g11040.1 28 6.4 At1g19940.1 28 6.4 At3g53570.2 28 6.4 At3g55890.1 28 8.3 >At1g78620.1 Length = 334 Score = 542 bits (1397), Expect = e-154 Identities = 286/333 (85%), Positives = 286/333 (85%) Frame = +1 Query: 1 MATISSTLLLNSSRSALPLXXXXXXXXXXXXXXXXXXXXGRRNLEPLSNGMLXXXXXXXX 180 MATISSTLLLNSSRSALPL GRRNLEPLSNGML Sbjct: 1 MATISSTLLLNSSRSALPLRFPKFSGFSSSSPFARSYRFGRRNLEPLSNGMLSSGSRADG 60 Query: 181 XXXXXXXMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLG 360 MEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLG Sbjct: 61 ATAAAASMEGVMTEAMKLIQSASPTWKSAVANNLLIFVLGSPLLVTGLSASGIAAAFLLG 120 Query: 361 TLTWRAYGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAAGCV 540 TLTWRAYGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAAGCV Sbjct: 121 TLTWRAYGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRGPRSVIGSSAAGCV 180 Query: 541 CAFLSIYQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTE 720 CAFLSIYQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTE Sbjct: 181 CAFLSIYQVGGAAFSQLFRLGFVSSFCTKVSDTVSSEIGKAYGKTTYLATTFKIVPRGTE 240 Query: 721 GAMSLEGTXXXXXXXXXXXXVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQDKEGF 900 GAMSLEGT VGCFLGQITPPEAAVCVLASQIANLGESIIGASFQDKEGF Sbjct: 241 GAMSLEGTLAGLLASFFLASVGCFLGQITPPEAAVCVLASQIANLGESIIGASFQDKEGF 300 Query: 901 KWLNNDVVNVINISLGSIVAILMQQFILQNWVK 999 KWLNNDVVNVINISLGSIVAILMQQFILQNWVK Sbjct: 301 KWLNNDVVNVINISLGSIVAILMQQFILQNWVK 333 >At5g19930.1 Length = 289 Score = 48.5 bits (114), Expect = 6e-06 Identities = 58/221 (26%), Positives = 87/221 (39%), Gaps = 20/221 (9%) Frame = +1 Query: 322 LSASGIAAAFLLGTLTWRAYGSAGFLLVAAYFVIGTAATKVKMTQKEAQGVAEKRKGRRG 501 L SG A FL+ T+ + A G LL+ +F+ + TKV +K V K G+R Sbjct: 29 LDLSGGIAGFLVMTIHFTAGFRYGALLLV-FFLTSSKLTKVGEDKKRRVDVEFKEGGQRN 87 Query: 502 PRSVIGSSAAGCVCAFLSIYQVG------GAAFSQLFRL---GFVSSFCTKVSDTVSSEI 654 V+ +S V ++ G + S++ G + + DT SSE+ Sbjct: 88 WVQVLCNSGIASVLVVIACTLTGWKDKCLDSKQSEIVTALIGGIIGHYACCNGDTWSSEL 147 Query: 655 GKAYGKTTYLATTFKIVPRGTEGAMSLEGTXXXXXXXXXXXXVGCFLGQITPPEAA---- 822 G L TTFK V +GT G ++ G G T A+ Sbjct: 148 GVLSDAQPRLITTFKPVKKGTNGGVTKAGLLAALAAGTTVGLTFLIFGLFTASCASDVAL 207 Query: 823 -------VCVLASQIANLGESIIGASFQDKEGFKWLNNDVV 924 + LA +L +SI+GA+ Q GF + N VV Sbjct: 208 KQLLVIPLSALAGLCGSLIDSILGATIQ-FSGFCSVRNKVV 247 >At2g39870.1 Length = 331 Score = 29.6 bits (65), Expect = 2.9 Identities = 18/57 (31%), Positives = 27/57 (47%) Frame = -2 Query: 899 NPSLS*KEAPIMLSPRLAIWEASTHTAASGGVI*PRKQPTDARKNDAKSPANVPSRL 729 NP + P L P+ A +A +G V PR+ P+ A + K+P N P+ L Sbjct: 218 NPRYVRRNNPTWLPPQQAAAPLKRPSAGTG-VFLPRRYPSAAPSDSLKTPVNTPAML 273 >At3g53570.1 Length = 454 Score = 28.5 bits (62), Expect = 6.4 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = -3 Query: 565 LDILKEKHRHNQQHLNQSHCVVLFYPFSFRPHLVLPFASF*PSLPLFL*RSKQR 404 +D+L+ RH+ + S CV + F +R H+ + F PSL FL ++ R Sbjct: 146 IDVLQRLTRHD---VGGSRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYR 196 >At1g11040.1 Length = 439 Score = 28.5 bits (62), Expect = 6.4 Identities = 12/45 (26%), Positives = 27/45 (60%) Frame = -3 Query: 880 KKHLLCSLQDWQSGKLVHIQLLLEELSDPGSSQQMQEKMMLKVQP 746 +K L C+L++ G + +I++ + ++D G Q +E + + +QP Sbjct: 260 EKKLECTLEELCHGGVKNIKIKRDIITDEGLIMQQEEMLRVNIQP 304 >At1g19940.1 Length = 516 Score = 28.5 bits (62), Expect = 6.4 Identities = 12/23 (52%), Positives = 18/23 (78%) Frame = +1 Query: 889 KEGFKWLNNDVVNVINISLGSIV 957 K+GFKWLN+D N N++ G++V Sbjct: 448 KDGFKWLNSDEPNP-NVAYGALV 469 >At3g53570.2 Length = 468 Score = 28.5 bits (62), Expect = 6.4 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = -3 Query: 565 LDILKEKHRHNQQHLNQSHCVVLFYPFSFRPHLVLPFASF*PSLPLFL*RSKQR 404 +D+L+ RH+ + S CV + F +R H+ + F PSL FL ++ R Sbjct: 160 IDVLQRLTRHD---VGGSRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYR 210 >At3g55890.1 Length = 122 Score = 28.1 bits (61), Expect = 8.3 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +1 Query: 823 VCVLASQIANLGESIIGASFQDKEGFKWLNNDVVNV 930 +C L + + I+ SFQ K G +L N+VVNV Sbjct: 15 ICKLCKTHLSTDQDIMSKSFQCKNGRAYLFNNVVNV 50 Database: ../database/ATH1_pep_20030417 Posted date: Feb 16, 2004 1:44 PM Number of letters in database: 12,141,370 Number of sequences in database: 28,581 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,553,242 Number of Sequences: 28581 Number of extensions: 407495 Number of successful extensions: 1226 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1186 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1225 length of database: 12,141,370 effective HSP length: 100 effective length of database: 9,283,270 effective search space used: 2163001910 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)