BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 214197
         (1342 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g02420.1                                                           480   e-136
At1g59560.1                                                            35   0.13 
At2g06430.1                                                            31   1.9  
At2g15190.1                                                            30   3.2  
At5g55120.1                                                            30   4.2  
At1g44850.1                                                            29   5.4  

>At3g02420.1
          Length = 349

 Score =  480 bits (1236), Expect = e-136
 Identities = 226/342 (66%), Positives = 255/342 (74%), Gaps = 2/342 (0%)
 Frame = +3

Query: 42   DQQKLKNTAAAAYDYENDPRWADYWSNILIPPHMASRSDVVDHFKRKFYQRYIDPGLVVE 221
            D Q+LK  AAAA+DYEND RWADYWSNILIPPHMASR +VVDHFKRKFYQRYIDP LVVE
Sbjct: 7    DSQRLKKIAAAAFDYENDARWADYWSNILIPPHMASRPEVVDHFKRKFYQRYIDPDLVVE 66

Query: 222  PMXXXXXXXXXXX-XXXXXXXXXXXXXXXXXRQRNSGQASRXXXXXXXXXXXXXXLRWDR 398
            PM                             R RNSG   R              +RWD 
Sbjct: 67   PMSTSSSSSQSARPTATSASSTASSNANEQVRSRNSGSVPRTSGPSATTGATPSSMRWDE 126

Query: 399  NTIQFSVNAWVFVVAVLSIFPLTPANLSNRAYRLSFLGTACSSLYSLYSVYGKPRAWNLQ 578
             TIQFSVNAWVFV+AVL++ PL P NLSNRAYRLSF+GTACSSLYSLYS+YG+PRAWN+Q
Sbjct: 127  QTIQFSVNAWVFVIAVLAVLPLIPKNLSNRAYRLSFMGTACSSLYSLYSLYGRPRAWNMQ 186

Query: 579  AVQVWFQSVIVTKDFISFIYCLTFVTSHLYLKFSLIPVLCRSLEHVGKFLRRNFGRSSLY 758
             +QV+FQS++  KDFI FIYCLTFVTSHL LKF+LIP+LCR+LE V KFLRRNFGRS++Y
Sbjct: 187  GLQVYFQSIVAAKDFIYFIYCLTFVTSHLCLKFALIPILCRALEQVAKFLRRNFGRSTIY 246

Query: 759  RKYLEEACVWVESNVTTLNILSSQAEIXXXXXXXXXXXXWQRNIIQTFMYWQILKLMYHA 938
            RKYLE+ CVWVESN TTLNILSSQAEI            WQRNIIQTFMYWQ+LKLMY A
Sbjct: 247  RKYLEDPCVWVESNTTTLNILSSQAEIAIGFLLIISLLSWQRNIIQTFMYWQLLKLMYQA 306

Query: 939  PATAGYHQNVWAKIGGLVNPVVQR-APFLNTPISTIQRWWFR 1061
            P TAGYHQ+ W++IG  V P++QR APFLNTP+S +QRWWFR
Sbjct: 307  PVTAGYHQSTWSRIGRTVTPIIQRYAPFLNTPVSAVQRWWFR 348


>At1g59560.1
          Length = 339

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +2

Query: 380 ITSLGPKYYTIFSECLGFCCCSSLNISAYTCKSVEQSISTVL 505
           +  L  KY T F EC   CCC+  ++   TC    + I  VL
Sbjct: 292 VVCLDQKYNTAFVECGHMCCCTPCSLQLRTCPLCRERIQQVL 333


>At2g06430.1
          Length = 796

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 432 FVVAVLSIFPLTPANLSNRAYRLSFLGTACSSLYSLYS 545
           F + VL+ FP  P N  +R Y L F+   C S+Y+ +S
Sbjct: 733 FSIKVLTTFPQAPRNEESRIYMLKFM--ECYSMYTSHS 768


>At2g15190.1
          Length = 776

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 432 FVVAVLSIFPLTPANLSNRAYRLSFLGTACSSLYSLYS 545
           F + VL+ FP TP N  +  Y L F+   C S+Y+ +S
Sbjct: 713 FSIKVLTTFPQTPRNEESGIYMLKFM--ECYSMYTSHS 748


>At5g55120.1
          Length = 432

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 422 CLGFCCCSSLNISAYTCKSVEQSI 493
           CL  CC +   +  YTCK++++S+
Sbjct: 30  CLSKCCINGARLPLYTCKNLDKSV 53


>At1g44850.1
          Length = 267

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
 Frame = -2

Query: 792 RPIRKPLLSTSCTKKICRSYVEE-----IYQHVQVIGIKQESKKI-SGKDGK 655
           +P+R+PL+  +  +KI R Y+ E     I  HV   GI+     I SG +GK
Sbjct: 41  QPLRQPLVHFNLQRKIARLYIPEPILALIVSHVSEEGIEALKNWIKSGHEGK 92


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,919,630
Number of Sequences: 28581
Number of extensions: 575217
Number of successful extensions: 1508
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1505
length of database: 12,141,370
effective HSP length: 103
effective length of database: 9,197,527
effective search space used: 3154751761
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= stgn_176386
         (1289 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g02420.1                                                           484   e-137
At2g06430.1                                                            31   1.8  
At1g59560.1                                                            31   1.8  
At2g15190.1                                                            30   3.0  
At5g23980.1                                                            30   4.0  
At5g13760.1                                                            29   5.2  
At1g51260.1                                                            29   6.8  
At4g22310.1                                                            28   8.8  
At5g55120.1                                                            28   8.8  

>At3g02420.1
          Length = 349

 Score =  484 bits (1246), Expect = e-137
 Identities = 226/348 (64%), Positives = 257/348 (73%)
 Frame = -3

Query: 1284 MGGGEEDQQKLKNTAAAAYDYENDPRWADYWSNILIPPHMASRSDVVDHFKRKFYQRYID 1105
            M  G ED Q+LK  AAAA+DYEND RWADYWSNILIPPHMASR +VVDHFKRKFYQRYID
Sbjct: 1    MAEGGEDSQRLKKIAAAAFDYENDARWADYWSNILIPPHMASRPEVVDHFKRKFYQRYID 60

Query: 1104 PGLVVEPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRNSGQAXXXXXXXXXXXXXXX 925
            P LVVEPM                               RNSG                 
Sbjct: 61   PDLVVEPMSTSSSSSQSARPTATSASSTASSNANEQVRSRNSGSVPRTSGPSATTGATPS 120

Query: 924  SLRWDRKTIQFSVNAWVFVVAVLSIFPLTPANLSNRAYRLSFLGTACSSLYSLYSVYGKP 745
            S+RWD +TIQFSVNAWVFV+AVL++ PL P NLSNRAYRLSF+GTACSSLYSLYS+YG+P
Sbjct: 121  SMRWDEQTIQFSVNAWVFVIAVLAVLPLIPKNLSNRAYRLSFMGTACSSLYSLYSLYGRP 180

Query: 744  RAWNLQAVQVWLQSVIVTKDFISFIYCLTFVTSHLYLKFSLIPVICRSLDHVGKFLRRNF 565
            RAWN+Q +QV+ QS++  KDFI FIYCLTFVTSHL LKF+LIP++CR+L+ V KFLRRNF
Sbjct: 181  RAWNMQGLQVYFQSIVAAKDFIYFIYCLTFVTSHLCLKFALIPILCRALEQVAKFLRRNF 240

Query: 564  SRSSLYRKYLEEACVWVESNVTTLNILSSQAEIXXXXXXXXXXXSWQRNIIQTFMYWQIL 385
             RS++YRKYLE+ CVWVESN TTLNILSSQAEI           SWQRNIIQTFMYWQ+L
Sbjct: 241  GRSTIYRKYLEDPCVWVESNTTTLNILSSQAEIAIGFLLIISLLSWQRNIIQTFMYWQLL 300

Query: 384  KLMYHAPATAGYHQSVWAKIGGFVNPVVQRYVPFLNTPISTIQRWWFR 241
            KLMY AP TAGYHQS W++IG  V P++QRY PFLNTP+S +QRWWFR
Sbjct: 301  KLMYQAPVTAGYHQSTWSRIGRTVTPIIQRYAPFLNTPVSAVQRWWFR 348


>At2g06430.1
          Length = 796

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -3

Query: 873 FVVAVLSIFPLTPANLSNRAYRLSFLGTACSSLYSLYS 760
           F + VL+ FP  P N  +R Y L F+   C S+Y+ +S
Sbjct: 733 FSIKVLTTFPQAPRNEESRIYMLKFM--ECYSMYTSHS 768


>At1g59560.1
          Length = 339

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -2

Query: 925 ITSMGPKNYTIFSECLGFCCCSSLNISAYTCKSVKQSIPTVL 800
           +  +  K  T F EC   CCC+  ++   TC   ++ I  VL
Sbjct: 292 VVCLDQKYNTAFVECGHMCCCTPCSLQLRTCPLCRERIQQVL 333


>At2g15190.1
          Length = 776

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -3

Query: 873 FVVAVLSIFPLTPANLSNRAYRLSFLGTACSSLYSLYS 760
           F + VL+ FP TP N  +  Y L F+   C S+Y+ +S
Sbjct: 713 FSIKVLTTFPQTPRNEESGIYMLKFM--ECYSMYTSHS 748


>At5g23980.1
          Length = 700

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
 Frame = -3

Query: 717 VWLQSVIVTKDFISFIYCLTFVTSHLYLKFSLIPVICRSLDH-VGKFLRRNFSRSSLYRK 541
           +WL  V++   F+ F+  +  VT     ++ + PV     DH  G     NFS   L+  
Sbjct: 527 LWL-GVVILSSFVMFLLLIGIVT-----RYYIYPV-----DHNTGSIY--NFSYRGLWDM 573

Query: 540 YLEEACVWVESNVTTL 493
           +L  AC+++ S+V  L
Sbjct: 574 FLGSACIFISSSVVFL 589


>At5g13760.1
          Length = 570

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
 Frame = -2

Query: 463 TGISSGCLSIIVAA--------*YYTNIHVLADIEAYVSCSCYCWLPSECVG*DRRVCKS 308
           TGI SGC+ +IVAA         +   I +LA    Y+       LP  CVG     C  
Sbjct: 472 TGICSGCVCLIVAAAWTHTVYKPFTATISLLAFFIGYLMTRISMALPHACVG-----CYY 526

Query: 307 SCSTLCPVPEYSYFNYSEMVVQVEDLLK 224
           +C      PE  +F   +++   +D++K
Sbjct: 527 TC--YAENPESRFFE-DKVIKTRQDMIK 551


>At1g51260.1
          Length = 377

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +2

Query: 818 LFDRFAGVSGNIERTATTKTQAFTENCIVFRSHRSDVGFEVGFV 949
           LFD +A +  N+   A T      E+ +V  +HRSD+ + +G+V
Sbjct: 60  LFDWWACIKINLYVDAETLELIGKEHALVLSNHRSDIDWLIGWV 103


>At4g22310.1
          Length = 109

 Score = 28.5 bits (62), Expect = 8.8
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
 Frame = -3

Query: 906 KTIQFSVNA--WVFVVAVLSIFPLTPANLSNRAYRLSFLGTACSSLYSLYSVYGKPRAWN 733
           KTI F      W   +A ++ F   P  LS   Y      T    ++S YS+   P+ WN
Sbjct: 17  KTIHFWAPTFKWGISIANIADFAKPPEKLS---YPQQIAVTCTGVIWSRYSMVINPKNWN 73

Query: 732 LQAVQV 715
           L +V V
Sbjct: 74  LFSVNV 79


>At5g55120.1
          Length = 432

 Score = 28.5 bits (62), Expect = 8.8
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 883 CLGFCCCSSLNISAYTCKSVKQSI 812
           CL  CC +   +  YTCK++ +S+
Sbjct: 30  CLSKCCINGARLPLYTCKNLDKSV 53


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,531,355
Number of Sequences: 28581
Number of extensions: 555393
Number of successful extensions: 1463
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1462
length of database: 12,141,370
effective HSP length: 103
effective length of database: 9,197,527
effective search space used: 2998393802
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cangn_198297
         (481 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g02420.1                                                           164   3e-41
At3g49600.1                                                            31   0.38 
At4g04350.1                                                            30   0.84 
At1g07250.1                                                            28   1.9  
At4g08596.1                                                            28   2.5  
At3g50340.1                                                            28   2.5  
At2g01570.1                                                            28   3.2  
At4g18820.1                                                            28   3.2  
At5g06905.1                                                            26   9.3  

>At3g02420.1
          Length = 349

 Score =  164 bits (414), Expect = 3e-41
 Identities = 78/138 (56%), Positives = 88/138 (63%)
 Frame = +2

Query: 68  MGGGDEDQQKLKSVAAAAYDYENDPRWADYWSNILIPPHMASRPDVVDHSKRKFYQRYID 247
           M  G ED Q+LK +AAAA+DYEND RWADYWSNILIPPHMASRP+VVDH KRKFYQRYID
Sbjct: 1   MAEGGEDSQRLKKIAAAAFDYENDARWADYWSNILIPPHMASRPEVVDHFKRKFYQRYID 60

Query: 248 PGLVVEPMXXXXXXXXXXXXXXXXXXXXXXXXXXXNHPRQRNSGQASRTSGTSTSPASNP 427
           P LVVEPM                              R RNSG   RTSG S +  + P
Sbjct: 61  PDLVVEPM-STSSSSSQSARPTATSASSTASSNANEQVRSRNSGSVPRTSGPSATTGATP 119

Query: 428 T*LRWDRKSIQFQVNAWV 481
           + +RWD ++IQF VNAWV
Sbjct: 120 SSMRWDEQTIQFSVNAWV 137


>At3g49600.1
          Length = 1068

 Score = 30.8 bits (68), Expect = 0.38
 Identities = 15/70 (21%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
 Frame = +2

Query: 32  SCDKLRVLKEREMGGGDEDQQKLKSVAAAAYDYENDPR-------WADYWSNILIPPHMA 190
           SC +  + KE+E+    E +Q+++++ + A     + +       W   W++  +PP + 
Sbjct: 490 SCKQYNLRKEKELNALTERRQEVRTILSEAAVQSLEEQYFWISTDWLRLWADTTLPPALD 549

Query: 191 SRPDVVDHSK 220
           + P +  H K
Sbjct: 550 NTPLLCSHGK 559


>At4g04350.1
          Length = 974

 Score = 29.6 bits (65), Expect = 0.84
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +2

Query: 128 YENDPRWADYWSNILIPPHMASRPDVVDHSKRKFY 232
           +E +P+W  YW +  I       PD VD SK KFY
Sbjct: 88  HEIEPKWQRYWEDNRI----FRTPDDVDTSKPKFY 118


>At1g07250.1
          Length = 480

 Score = 28.5 bits (62), Expect = 1.9
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 14  SDGSEYSCDKLRVLKEREMGGGDEDQQKLKSVAAAA 121
           S G   +CD++       M GGDE ++K+K +A AA
Sbjct: 416 SRGGLVTCDEIARAVRSLMDGGDEKRKKVKEMADAA 451


>At4g08596.1
          Length = 394

 Score = 28.1 bits (61), Expect = 2.5
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 71  GGGDEDQQKLKSVAAAAYDYENDPRWADYWSNIL 172
           G  D  +Q     +   YDYE +  W   WSN+L
Sbjct: 231 GECDSKEQFAMDFSKCVYDYEEEEDWLLAWSNML 264


>At3g50340.1
          Length = 404

 Score = 28.1 bits (61), Expect = 2.5
 Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 2/80 (2%)
 Frame = +2

Query: 14  SDGSEYSCDKLRVLKEREMGGGDEDQQKLK--SVAAAAYDYENDPRWADYWSNILIPPHM 187
           SD       K R + E+  G            S+ +      + PRW ++WS+  +    
Sbjct: 206 SDTCPVVLTKQRSVSEKSAGSSSSSSSNFSRMSLDSGRVHGSSTPRWVEFWSDAAVDRRR 265

Query: 188 ASRPDVVDHSKRKFYQRYID 247
            +    +  S     +RY+D
Sbjct: 266 RNSASSMSSSHSSSPERYLD 285


>At2g01570.1
          Length = 588

 Score = 27.7 bits (60), Expect = 3.2
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 8   TLSDGSEYSCDKLRVLKEREMGGGDEDQQKL 100
           T S  S  S DK+ ++K+ E GGG+ D + L
Sbjct: 17  TSSSSSSISKDKMMMVKKEEDGGGNMDDELL 47


>At4g18820.1
          Length = 1112

 Score = 27.7 bits (60), Expect = 3.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 254  GQGRCSVGRICAWNGQRRRDEKPCEEE 174
            G GR  +  +   NGQRR+ +K  EEE
Sbjct: 961  GSGRSEIVEVTESNGQRRQQQKQQEEE 987


>At5g06905.1
          Length = 522

 Score = 26.2 bits (56), Expect = 9.3
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 47  RVLKEREMGGGDEDQQKLKSVAAAAYDYENDPR 145
           ++LKE E    +E+++K K +     D  NDP+
Sbjct: 249 KILKEYENDKSNEEEEKDKDIVDILLDTYNDPK 281


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,400,694
Number of Sequences: 28581
Number of extensions: 141049
Number of successful extensions: 413
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of database: 12,141,370
effective HSP length: 92
effective length of database: 9,511,918
effective search space used: 637298506
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cgn_122836
         (1014 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g02420.1                                                           431   e-121
At3g11950.1                                                            29   5.0  
At1g35380.1                                                            28   8.5  

>At3g02420.1
          Length = 349

 Score =  431 bits (1108), Expect = e-121
 Identities = 206/314 (65%), Positives = 235/314 (74%), Gaps = 1/314 (0%)
 Frame = +3

Query: 75   DPQKLKRIAAAAYDYDNDPRWADYWSNVLIPPHMASRPDVVEHFKRKFYQRYIDPDLVVE 254
            D Q+LK+IAAAA+DY+ND RWADYWSN+LIPPHMASRP+VV+HFKRKFYQRYIDPDLVVE
Sbjct: 7    DSQRLKKIAAAAFDYENDARWADYWSNILIPPHMASRPEVVDHFKRKFYQRYIDPDLVVE 66

Query: 255  PMXXXXXXXXXXX-XXXXXXXXXXXXXXXXXRPRNAGSTGRASGASTTQTPSSTSLRWDR 431
            PM                             R RN+GS  R SG S T   + +S+RWD 
Sbjct: 67   PMSTSSSSSQSARPTATSASSTASSNANEQVRSRNSGSVPRTSGPSATTGATPSSMRWDE 126

Query: 432  QTIQFSVNAWXXXXXXXXIFPLVPRDLSMRAFRLAFVGTACXXXXXXXXXXGKPRAWNMQ 611
            QTIQFSVNAW        + PL+P++LS RA+RL+F+GTAC          G+PRAWNMQ
Sbjct: 127  QTIQFSVNAWVFVIAVLAVLPLIPKNLSNRAYRLSFMGTACSSLYSLYSLYGRPRAWNMQ 186

Query: 612  AVQVWFQSVFVGKDFIYFIYCLTFVTSNLYLKFALIPVLSRALEHVAKFLRRNFSRSTLY 791
             +QV+FQS+   KDFIYFIYCLTFVTS+L LKFALIP+L RALE VAKFLRRNF RST+Y
Sbjct: 187  GLQVYFQSIVAAKDFIYFIYCLTFVTSHLCLKFALIPILCRALEQVAKFLRRNFGRSTIY 246

Query: 792  RKYLEDACVWVESNTTTLNILSSQAEIGNGFLLIISLISWQRNIIQAFMYWQLLKLMYHA 971
            RKYLED CVWVESNTTTLNILSSQAEI  GFLLIISL+SWQRNIIQ FMYWQLLKLMY A
Sbjct: 247  RKYLEDPCVWVESNTTTLNILSSQAEIAIGFLLIISLLSWQRNIIQTFMYWQLLKLMYQA 306

Query: 972  PATGNYHRSAWAKI 1013
            P T  YH+S W++I
Sbjct: 307  PVTAGYHQSTWSRI 320


>At3g11950.1
          Length = 955

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
 Frame = +3

Query: 675  LTFVTSNLYLKFALIPVLSRALEHVAKFLRRNFSRSTLYRKYLEDACVWVESNTTTLNIL 854
            + F+TS + L FAL+  +++ L  V     R F  STL  K       ++ S    +N +
Sbjct: 831  VAFITSFVTL-FALVIAITKDLPDVEG--DRKFQISTLATKLGVRNIAFLGSGLLLVNYV 887

Query: 855  SS------QAEIGNGFLLIISLISWQRNIIQAFMYWQLLKLMYHAPATGNYHRSAW 1004
            S+        ++  G L+I + +     +I  F  W L K  Y   A   Y+R  W
Sbjct: 888  SAISLAFYMPQVFRGSLMIPAHVILASGLI--FQTWVLEKANYTKEAISGYYRFIW 941


>At1g35380.1
          Length = 509

 Score = 28.1 bits (61), Expect = 8.5
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = +3

Query: 744 HVAKFLRRNFSRSTLYRKYLEDACV--WVESNTTTLNILSSQAEIGNGFLLIISL 902
           H    L R + ++   +  L + CV  W E+N+ +  ILSS+ E  +  +L+ S+
Sbjct: 214 HQCLMLGRGYEKAHPKKNSLNNCCVAKWSENNSQSKGILSSKPEHVHNTVLLTSM 268


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,183,571
Number of Sequences: 28581
Number of extensions: 383571
Number of successful extensions: 1033
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 12,141,370
effective HSP length: 100
effective length of database: 9,283,270
effective search space used: 2200134990
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= At3g02420.1
         (1047 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g02420.1                                                           642   0.0  
At3g32200.1                                                            30   3.0  
At3g50400.1                                                            30   3.0  
At4g29310.1                                                            28   6.7  
At4g38180.1                                                            28   8.8  

>At3g02420.1
          Length = 349

 Score =  642 bits (1655), Expect = 0.0
 Identities = 315/348 (90%), Positives = 315/348 (90%)
 Frame = +1

Query: 1    MAEGGEDSQRLKKIAAAAFDYENDARWADYWSNILIPPHMASRPEVVDHFKRKFYQRYID 180
            MAEGGEDSQRLKKIAAAAFDYENDARWADYWSNILIPPHMASRPEVVDHFKRKFYQRYID
Sbjct: 1    MAEGGEDSQRLKKIAAAAFDYENDARWADYWSNILIPPHMASRPEVVDHFKRKFYQRYID 60

Query: 181  PDLVVEPMXXXXXXXXXXXXXXXXXXXXXXXNANEQVRSRNSGSVPRTSGPSATTGATPS 360
            PDLVVEPM                       NANEQVRSRNSGSVPRTSGPSATTGATPS
Sbjct: 61   PDLVVEPMSTSSSSSQSARPTATSASSTASSNANEQVRSRNSGSVPRTSGPSATTGATPS 120

Query: 361  SMRWDEQTIQFSVNAWVFVIAVLAVLPLIPKNLSNRAYRLSFMGTACXXXXXXXXXXGRP 540
            SMRWDEQTIQFSVNAWVFVIAVLAVLPLIPKNLSNRAYRLSFMGTAC          GRP
Sbjct: 121  SMRWDEQTIQFSVNAWVFVIAVLAVLPLIPKNLSNRAYRLSFMGTACSSLYSLYSLYGRP 180

Query: 541  RAWNMQGLQVYFQSIVAAKDFIYFIYCLTFVTSHLCLKFALIPILCRALEQVAKFLRRNF 720
            RAWNMQGLQVYFQSIVAAKDFIYFIYCLTFVTSHLCLKFALIPILCRALEQVAKFLRRNF
Sbjct: 181  RAWNMQGLQVYFQSIVAAKDFIYFIYCLTFVTSHLCLKFALIPILCRALEQVAKFLRRNF 240

Query: 721  GRSTIYRKYLEDPCVWVESNTTTLNILSSQAEIAIGFLLIISLLSWQRNIIQTFMYWQLL 900
            GRSTIYRKYLEDPCVWVESNTTTLNILSSQAEIAIGFLLIISLLSWQRNIIQTFMYWQLL
Sbjct: 241  GRSTIYRKYLEDPCVWVESNTTTLNILSSQAEIAIGFLLIISLLSWQRNIIQTFMYWQLL 300

Query: 901  KLMYQAPVTAGYHQSTWSRIGRTVTPIIQRYAPFLNTPVSAVQRWWFR 1044
            KLMYQAPVTAGYHQSTWSRIGRTVTPIIQRYAPFLNTPVSAVQRWWFR
Sbjct: 301  KLMYQAPVTAGYHQSTWSRIGRTVTPIIQRYAPFLNTPVSAVQRWWFR 348


>At3g32200.1
          Length = 149

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 292 RSRNSGSVPRTSGPSATTGATPSSMRWDEQTI 387
           RS  S  +PR+ GP     A+PSS  W E+ +
Sbjct: 108 RSPRSSPLPRSMGPPPPVIASPSSRSWGERPV 139


>At3g50400.1
          Length = 375

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +3

Query: 525 LIREAKGMEYARAASLFSINCGSKGFHLLHLLPYIRHFTSLSQ 653
           L+ + K  +Y R  SLFS+  GS  F   +L+P++     L+Q
Sbjct: 154 LLGQDKARDYIRKRSLFSVVIGSNDFLNNYLVPFVAAQARLTQ 196


>At4g29310.1
          Length = 425

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -3

Query: 760 KGLPSTFCI*WTDQSYASRTWLLVQVPGTRWESKQT*DR 644
           + LPS F       +Y+SR W+   + G +WE KQ  +R
Sbjct: 201 RSLPSGF-------TYSSRGWITRTLSGDQWEKKQARER 232


>At4g38180.1
          Length = 789

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = +2

Query: 512 IPYTPYTGGQGHG--ICKGCKFIFNQ 583
           +P+ P+TG   HG  I  GC FI N+
Sbjct: 313 LPFAPFTGVNHHGQPILFGCAFIINE 338


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,259,976
Number of Sequences: 28581
Number of extensions: 486412
Number of successful extensions: 1379
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1379
length of database: 12,141,370
effective HSP length: 101
effective length of database: 9,254,689
effective search space used: 2285908183
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)