BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= stgn_178004
         (788 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g39600.1                                                           209   2e-54
At2g46240.1                                                            29   2.6  
At4g08300.1                                                            29   2.6  
At1g32380.1                                                            28   5.9  
At3g49260.1                                                            28   7.7  
At1g11310.1                                                            28   7.7  

>At5g39600.1
          Length = 128

 Score =  209 bits (531), Expect = 2e-54
 Identities = 100/127 (78%), Positives = 114/127 (89%)
 Frame = +1

Query: 43  MLKFLSKVKIEFNALDPRIASCMEFLAQCNAPKAKESNPSCQVQVKRRTDDHPPQISVTF 222
           MLKFLSKV+IEFN LDPR+ASC+EFLAQCNA KAKESNP+CQV VKRRTD+ PPQI+VTF
Sbjct: 1   MLKFLSKVRIEFNTLDPRLASCVEFLAQCNARKAKESNPNCQVLVKRRTDEQPPQITVTF 60

Query: 223 VNGVEQTYDATTTPAQNIRTMILEKGQYLETEQMFREAGEKWPVIIPDEELKQPFLGIKP 402
           VNGVE+ +DA  T AQ+IR MIL+KGQYLETEQMFREAGE+WPVIIPDEEL Q   G+KP
Sbjct: 61  VNGVEEAFDAAATSAQSIRKMILDKGQYLETEQMFREAGEQWPVIIPDEELLQEAPGVKP 120

Query: 403 KKAEEKK 423
           +KAE+KK
Sbjct: 121 RKAEDKK 127


>At2g46240.1
          Length = 1044

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
 Frame = +1

Query: 193  DHPPQISVTFVNGV-EQTYDATTTPAQNIRTMILEKGQYLETEQMFREAGEKWPVIIPDE 369
            DH P  S     G+ +QT +      Q+  T ++ K Q LETE +  E         P+ 
Sbjct: 917  DHSPNNS----KGIGQQTSEPQDEKEQSPETEVIVKEQPLETEVILNEQA-------PEP 965

Query: 370  ELKQPFLGIKPKKAEEKKQ 426
            E+ +P +  + KK  E+ Q
Sbjct: 966  EITEPGISKETKKLMEENQ 984


>At4g08300.1
          Length = 374

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 16/63 (25%), Positives = 27/63 (42%)
 Frame = -3

Query: 306 VLTLFKNHGTDILCRCSSCIIGLLDSIDESDRDLRWMVIRAALDLNLATWV*FFGFRSIT 127
           V+TL+K    ++     S + G          D  W+    A+  ++ TW  FF  +S T
Sbjct: 150 VMTLYKGPAIELFKTAHSSLHGGSSGTSSETTDQNWVTGTLAVMGSITTWAGFFILQSFT 209

Query: 126 LSQ 118
           L +
Sbjct: 210 LKK 212


>At1g32380.1
          Length = 401

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
 Frame = +1

Query: 58  SKVKIEFNALDPRIASCMEFLAQCNAPKAKESNPSC----QVQVKRRTDDHPPQISVTFV 225
           S+  I F   + R   C+   A+CN PKA   N       +  + +  D    + SV+  
Sbjct: 27  SRSSISFRTTESRSRICVSGYAKCNLPKALNGNARVPIINETTIPKFFDSSRLEKSVSRN 86

Query: 226 NGVEQTYDATTTPA 267
           N   + +  T  PA
Sbjct: 87  NTKLKLFSGTANPA 100


>At3g49260.1
          Length = 472

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -1

Query: 461 PDEKLGVSSFDYCFFSSAFFGFIPRNGCLSSSSG--MITGHFSPASRNICSVSRY*PFS 291
           P  KL  +SF   + SS   G +  +GC SSSSG  + TG+  P S N  S  R  P S
Sbjct: 396 PTVKLQGTSFMPYWNSSTKNGSVNGSGCDSSSSGGAITTGYPGPRSPNPKSDIRRKPVS 454


>At1g11310.1
          Length = 574

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = -1

Query: 452 KLGVSSFDYCFFSSAFFGFIPRNGCLSSSSGMITGHFSPASRNICSVSRY 303
           K  V+ +  CFF   FFG + +   L+   G I  HF+P + +     +Y
Sbjct: 231 KTRVTLWIVCFFRQ-FFGSVTKVDYLALRHGFIMAHFAPGNESRFDFRKY 279


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,208,807
Number of Sequences: 28581
Number of extensions: 329229
Number of successful extensions: 847
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,141,370
effective HSP length: 98
effective length of database: 9,340,432
effective search space used: 1531830848
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cangn_204820
         (376 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g39600.1                                                           197   1e-51
At1g32380.1                                                            27   2.3  
At4g15730.1                                                            27   2.3  
At3g42806.2                                                            27   3.1  
At3g42806.1                                                            27   3.1  
At5g63770.1                                                            26   6.8  
At5g45500.1                                                            26   6.8  
At4g08300.1                                                            26   6.8  
At4g26190.1                                                            25   8.9  
At4g36390.1                                                            25   8.9  
At1g32030.1                                                            25   8.9  

>At5g39600.1
          Length = 128

 Score =  197 bits (501), Expect = 1e-51
 Identities = 94/121 (77%), Positives = 107/121 (88%)
 Frame = +3

Query: 12  MLKFLSKVKIEFNALDPRIASCMEFLAQCNAPKAKESNPSCQVQVKRRTDDHPPQITVTF 191
           MLKFLSKV+IEFN LDPR+ASC+EFLAQCNA KAKESNP+CQV VKRRTD+ PPQITVTF
Sbjct: 1   MLKFLSKVRIEFNTLDPRLASCVEFLAQCNARKAKESNPNCQVLVKRRTDEQPPQITVTF 60

Query: 192 VNGVEQTYDATTTPAQNIRSMILEKGQYLETEQMFRDAGEKWPVIIPDSELEQPFLGIKP 371
           VNGVE+ +DA  T AQ+IR MIL+KGQYLETEQMFR+AGE+WPVIIPD EL Q   G+KP
Sbjct: 61  VNGVEEAFDAAATSAQSIRKMILDKGQYLETEQMFREAGEQWPVIIPDEELLQEAPGVKP 120

Query: 372 K 374
           +
Sbjct: 121 R 121


>At1g32380.1
          Length = 401

 Score = 27.3 bits (59), Expect = 2.3
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 27  SKVKIEFNALDPRIASCMEFLAQCNAPKAKESN 125
           S+  I F   + R   C+   A+CN PKA   N
Sbjct: 27  SRSSISFRTTESRSRICVSGYAKCNLPKALNGN 59


>At4g15730.1
          Length = 1060

 Score = 27.3 bits (59), Expect = 2.3
 Identities = 15/68 (22%), Positives = 31/68 (45%)
 Frame = +3

Query: 117 ESNPSCQVQVKRRTDDHPPQITVTFVNGVEQTYDATTTPAQNIRSMILEKGQYLETEQMF 296
           E +P  ++ V ++  DH PQ+     +   +      +  + IR M  ++G+  +  ++F
Sbjct: 650 ERDPKKRLLVSKKKPDHKPQLITASGSLCTKAQGNINSTVRKIRLMGYKQGKDGKNSKLF 709

Query: 297 RDAGEKWP 320
            D  E  P
Sbjct: 710 ADGEENEP 717


>At3g42806.2
          Length = 807

 Score = 26.9 bits (58), Expect = 3.1
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 19/69 (27%)
 Frame = +3

Query: 39  IEFNALDPRIAS----CMEFLAQCNAP-----------KAKESNPSCQVQV----KRRTD 161
           I+FN +   I +    C ++LA CN P            A + NPS  + +    KRRT 
Sbjct: 684 IDFNKIFAEIKAKHGPCTDYLASCNTPILQLDHEAQVQPANDLNPSENLMIPHDYKRRTQ 743

Query: 162 DHPPQITVT 188
             P Q+T T
Sbjct: 744 T-PNQVTKT 751


>At3g42806.1
          Length = 807

 Score = 26.9 bits (58), Expect = 3.1
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 19/69 (27%)
 Frame = +3

Query: 39  IEFNALDPRIAS----CMEFLAQCNAP-----------KAKESNPSCQVQV----KRRTD 161
           I+FN +   I +    C ++LA CN P            A + NPS  + +    KRRT 
Sbjct: 684 IDFNKIFAEIKAKHGPCTDYLASCNTPILQLDHEAQVQPANDLNPSENLMIPHDYKRRTQ 743

Query: 162 DHPPQITVT 188
             P Q+T T
Sbjct: 744 T-PNQVTKT 751


>At5g63770.1
          Length = 713

 Score = 25.8 bits (55), Expect = 6.8
 Identities = 14/58 (24%), Positives = 24/58 (41%)
 Frame = +3

Query: 93  QCNAPKAKESNPSCQVQVKRRTDDHPPQITVTFVNGVEQTYDATTTPAQNIRSMILEK 266
           +C+   +KES  +C +   RR    P  + +   NGV+           +IR  +  K
Sbjct: 195 KCHMIMSKESGDACDLGSLRRVILSPVHVKLNEANGVDGVLTTIKNELASIRGHVRRK 252


>At5g45500.1
          Length = 490

 Score = 25.8 bits (55), Expect = 6.8
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 15  LKFLSKVKIEFNALDPRIASCMEFLAQCNAPK 110
           LKFL K+K+E+  L  R    ++FL +   P+
Sbjct: 438 LKFLPKLKVEWRDLSKRYFPELKFLEKYQCPQ 469


>At4g08300.1
          Length = 374

 Score = 25.8 bits (55), Expect = 6.8
 Identities = 14/61 (22%), Positives = 24/61 (39%)
 Frame = -3

Query: 275 ILTLFKNHAPNXXXXXXXXXXXLFNTINESNSDLRWMVICAALNLYLTTWV*FFRFRCIT 96
           ++TL+K  A               +  +   +D  W+    A+   +TTW  FF  +  T
Sbjct: 150 VMTLYKGPAIELFKTAHSSLHGGSSGTSSETTDQNWVTGTLAVMGSITTWAGFFILQSFT 209

Query: 95  L 93
           L
Sbjct: 210 L 210


>At4g26190.1
          Length = 1068

 Score = 25.4 bits (54), Expect = 8.9
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
 Frame = +3

Query: 57  DPRIASCMEFLAQCNAPKAKESNPSCQVQVKRRTDDHPPQ---ITVTFVNGVEQTYDATT 227
           DP +++C + L     P A     S + +  +R D +  +   + +   N      D TT
Sbjct: 203 DPNLSTCKDSL-----PDATNMTSSSKRKRNKRRDRNVLKESGVDIGSTNAEVAVTDNTT 257

Query: 228 TPAQNIRSMILEK 266
           T A+  RSM +E+
Sbjct: 258 TEAEGSRSMSIEE 270


>At4g36390.1
          Length = 641

 Score = 25.4 bits (54), Expect = 8.9
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 231 PAQNIRSMILEKGQYLETEQMFRDAGEKWPVIIPDSELEQPFL 359
           PAQ+  S ILE+ +   T + + D  +K   IIPD  +   F+
Sbjct: 424 PAQSGNSRILEQMRRGYTREAYLDLVKKIRSIIPDVAITSDFI 466


>At1g32030.1
          Length = 334

 Score = 25.4 bits (54), Expect = 8.9
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 69  ASCMEFLAQCNAPKAKESNPSCQVQVKRRTDDHPPQ 176
           +S    LA+ N   A   NP+ +  +KR+  D  P+
Sbjct: 138 SSSSTLLAEYNTEMANPPNPNSETSLKRKHSDSEPK 173


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,072,457
Number of Sequences: 28581
Number of extensions: 143125
Number of successful extensions: 376
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 376
length of database: 12,141,370
effective HSP length: 87
effective length of database: 9,654,823
effective search space used: 357228451
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cgn_121381
         (614 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g39600.1                                                           218   2e-57
At2g29210.1                                                            32   0.21 
At2g21500.2                                                            31   0.47 
At2g21500.1                                                            31   0.47 
At5g37270.1                                                            28   5.2  
At2g21840.1                                                            27   6.7  
At5g63770.1                                                            27   8.8  
At4g16250.1                                                            27   8.8  
At5g37230.1                                                            27   8.8  

>At5g39600.1
          Length = 128

 Score =  218 bits (556), Expect = 2e-57
 Identities = 106/127 (83%), Positives = 116/127 (91%)
 Frame = +2

Query: 47  MLKFLSKVRIEFNALDPRTAACMEFLAQCNARKAKESNPACQVQVKRRTDDQPPQITVTF 226
           MLKFLSKVRIEFN LDPR A+C+EFLAQCNARKAKESNP CQV VKRRTD+QPPQITVTF
Sbjct: 1   MLKFLSKVRIEFNTLDPRLASCVEFLAQCNARKAKESNPNCQVLVKRRTDEQPPQITVTF 60

Query: 227 VNGVEEKFDATATPAQTIRNMILEKGQYLETEQMFREAGERWPVIIPEEELNQPFPGIKP 406
           VNGVEE FDA AT AQ+IR MIL+KGQYLETEQMFREAGE+WPVIIP+EEL Q  PG+KP
Sbjct: 61  VNGVEEAFDAAATSAQSIRKMILDKGQYLETEQMFREAGEQWPVIIPDEELLQEAPGVKP 120

Query: 407 KKAEEKK 427
           +KAE+KK
Sbjct: 121 RKAEDKK 127


>At2g29210.1
          Length = 879

 Score = 32.3 bits (72), Expect = 0.21
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
 Frame = +3

Query: 138 PARLRNRTQLARSKLSAGPTINRLKSPSPSSTE-------LRRNLTPPPLQRR 275
           PAR       AR + S  P   R +SPSP +          RRN +P PL RR
Sbjct: 356 PARRHRSPPPARRRRSPSPPARRRRSPSPPARRRRSPSPLYRRNRSPSPLYRR 408



 Score = 29.6 bits (65), Expect = 1.4
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = +3

Query: 138 PARLRNRTQLARSKLSAGPTINRLKSPSPSSTELRRNLTPPPLQRRPSGT*FWRR 302
           PAR R        +  + P   R +SPSP +   RR    PP +RR S +  +RR
Sbjct: 346 PARQRRSPSPPARRHRSPPPARRRRSPSPPAR--RRRSPSPPARRRRSPSPLYRR 398



 Score = 27.7 bits (60), Expect = 5.2
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = +3

Query: 177 KLSAGPTINRLKSPSPSSTE---LRRNLTPPPLQRRPSGT*FWRRVS 308
           ++      N L+SPSPSS      ++ L  PP++RR S T    RVS
Sbjct: 494 RIGGSHAANHLESPSPSSLSPPGRKKVLPSPPVRRRRSLTPDEERVS 540


>At2g21500.2
          Length = 422

 Score = 31.2 bits (69), Expect = 0.47
 Identities = 26/107 (24%), Positives = 41/107 (38%), Gaps = 1/107 (0%)
 Frame = +3

Query: 135 TPARLRNRTQLARSKLSAGPTINRLKSPSPSSTELRRNLTPPP-LQRRPSGT*FWRRVST 311
           +PA+L        S  S  P  ++   P P ++  +  LTPPP L ++ S    +   S 
Sbjct: 128 SPAKLSLSLASQPSSFSVSPLSSQSHLPMPPASSSQLKLTPPPRLSKQVSYGQIFGFTSP 187

Query: 312 WRPSKCSERXXXXXXXXXXXXXXTNHSLVLSRRKQKRRSSDCSQQRR 452
            R S   ER               +  +  SRR+     ++C   RR
Sbjct: 188 SRSSATEERLGNESQSDGWSMQAFSEMMAYSRRESCSYDNECFGLRR 234


>At2g21500.1
          Length = 422

 Score = 31.2 bits (69), Expect = 0.47
 Identities = 26/107 (24%), Positives = 41/107 (38%), Gaps = 1/107 (0%)
 Frame = +3

Query: 135 TPARLRNRTQLARSKLSAGPTINRLKSPSPSSTELRRNLTPPP-LQRRPSGT*FWRRVST 311
           +PA+L        S  S  P  ++   P P ++  +  LTPPP L ++ S    +   S 
Sbjct: 128 SPAKLSLSLASQPSSFSVSPLSSQSHLPMPPASSSQLKLTPPPRLSKQVSYGQIFGFTSP 187

Query: 312 WRPSKCSERXXXXXXXXXXXXXXTNHSLVLSRRKQKRRSSDCSQQRR 452
            R S   ER               +  +  SRR+     ++C   RR
Sbjct: 188 SRSSATEERLGNESQSDGWSMQAFSEMMAYSRRESCSYDNECFGLRR 234


>At5g37270.1
          Length = 209

 Score = 27.7 bits (60), Expect = 5.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 522 TICLQD*DSSHN*KTRPYCSNNILDVADCSHCFFSSAFF 406
           +ICL+D   SH+        +NI+ + DC H F  S  F
Sbjct: 154 SICLEDFSESHD--------DNIILLPDCFHLFHQSCIF 184


>At2g21840.1
          Length = 747

 Score = 27.3 bits (59), Expect = 6.7
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +3

Query: 384 NHSLVL---SRRKQKRRSSDCSQQRRGYYLSNRAESFSCDLNLNLEDK 518
           NHSL L   + R  +R+   C     G+ L  R  +F  D+N  L+DK
Sbjct: 451 NHSLTLLPNTPRWFRRKCESCKDDIGGFNLFCRICNFIIDINCALKDK 498


>At5g63770.1
          Length = 713

 Score = 26.9 bits (58), Expect = 8.8
 Identities = 15/58 (25%), Positives = 24/58 (41%)
 Frame = +2

Query: 128 QCNARKAKESNPACQVQVKRRTDDQPPQITVTFVNGVEEKFDATATPAQTIRNMILEK 301
           +C+   +KES  AC +   RR    P  + +   NGV+           +IR  +  K
Sbjct: 195 KCHMIMSKESGDACDLGSLRRVILSPVHVKLNEANGVDGVLTTIKNELASIRGHVRRK 252


>At4g16250.1
          Length = 1165

 Score = 26.9 bits (58), Expect = 8.8
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 289 DSGEGSVPGDRANVPRGWGAVACHYT*GRAQP 384
           + G G   G R N  R WG V CH+T  R  P
Sbjct: 385 EDGNGVNTGGR-NSMRLWGLVVCHHTSARCIP 415


>At5g37230.1
          Length = 209

 Score = 26.9 bits (58), Expect = 8.8
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -3

Query: 522 TICLQD*DSSHN*KTRPYCSNNILDVADCSHCFFSSAFF 406
           +IC++D   SH+        +NI+ + DC H F  S  F
Sbjct: 154 SICMEDFSESHD--------DNIILLPDCFHLFHQSCIF 184


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,757,192
Number of Sequences: 28581
Number of extensions: 264294
Number of successful extensions: 908
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 12,141,370
effective HSP length: 95
effective length of database: 9,426,175
effective search space used: 1027453075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
BLASTX 2.2.6 [Apr-09-2003]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= At5g39600.1
         (384 letters)

Database: ../database/ATH1_pep_20030417 
           28,581 sequences; 12,141,370 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g39600.1                                                           254   7e-69
At1g32380.1                                                            27   2.5  
At4g25440.1                                                            27   3.2  
At2g34780.1                                                            27   3.2  
At5g51980.1                                                            27   4.2  
At4g05540.1                                                            27   4.2  
At1g10890.1                                                            26   5.5  
At3g03680.1                                                            26   5.5  
At2g44830.1                                                            26   5.5  
At5g46600.1                                                            26   7.2  
At5g43190.1                                                            26   7.2  
At2g30930.1                                                            25   9.4  
At3g25010.1                                                            25   9.4  
At1g32030.1                                                            25   9.4  
At1g59500.1                                                            25   9.4  

>At5g39600.1
          Length = 128

 Score =  254 bits (650), Expect = 7e-69
 Identities = 127/127 (100%), Positives = 127/127 (100%)
 Frame = +1

Query: 1   MLKFLSKVRIEFNTLDPRLASCVEFLAQCNARKAKESNPNCQVLVKRRTDEQPPQITVTF 180
           MLKFLSKVRIEFNTLDPRLASCVEFLAQCNARKAKESNPNCQVLVKRRTDEQPPQITVTF
Sbjct: 1   MLKFLSKVRIEFNTLDPRLASCVEFLAQCNARKAKESNPNCQVLVKRRTDEQPPQITVTF 60

Query: 181 VNGVEEAFDAAATSAQSIRKMILDKGQYLETEQMFREAGEQWPVIIPDEELLQEAPGVKP 360
           VNGVEEAFDAAATSAQSIRKMILDKGQYLETEQMFREAGEQWPVIIPDEELLQEAPGVKP
Sbjct: 61  VNGVEEAFDAAATSAQSIRKMILDKGQYLETEQMFREAGEQWPVIIPDEELLQEAPGVKP 120

Query: 361 RKAEDKK 381
           RKAEDKK
Sbjct: 121 RKAEDKK 127


>At1g32380.1
          Length = 401

 Score = 27.3 bits (59), Expect = 2.5
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 16  SKVRIEFNTLDPRLASCVEFLAQCNARKAKESNPNCQVL 132
           S+  I F T + R   CV   A+CN  KA   N    ++
Sbjct: 27  SRSSISFRTTESRSRICVSGYAKCNLPKALNGNARVPII 65


>At4g25440.1
          Length = 431

 Score = 26.9 bits (58), Expect = 3.2
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 97  SLHCIELRIQHKTQVLDLMC*TQFLL 20
           +L CI+   +H + V+ L+C  QFLL
Sbjct: 296 NLQCIQTLTEHTSVVMSLICWDQFLL 321


>At2g34780.1
          Length = 1298

 Score = 26.9 bits (58), Expect = 3.2
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 268 ETEQMFREAGEQWPVIIPDEELLQEAPGVK 357
           E E  F+E  +   +I+ DEE+ Q+ P VK
Sbjct: 142 EREHAFKELNKAKALIVKDEEIEQDIPEVK 171


>At5g51980.1
          Length = 438

 Score = 26.6 bits (57), Expect = 4.2
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -3

Query: 97  SLHCIELRIQHKTQVLDLMC*TQFLL 20
           +L CI+    H + V+ L+C  QFLL
Sbjct: 303 NLQCIQTLTDHSSVVMSLICWDQFLL 328


>At4g05540.1
          Length = 661

 Score = 26.6 bits (57), Expect = 4.2
 Identities = 18/70 (25%), Positives = 34/70 (48%)
 Frame = +1

Query: 130 LVKRRTDEQPPQITVTFVNGVEEAFDAAATSAQSIRKMILDKGQYLETEQMFREAGEQWP 309
           L  + T E+  +I +TF   V E FD  + + + I+K ++D   Y    + F  + +   
Sbjct: 259 LGSKETPEKEEEIILTFGEFVMEKFDGLSETMKKIQKDMVD--LYTHLPKSFLSSNDVKN 316

Query: 310 VIIPDEELLQ 339
           +I+  + L Q
Sbjct: 317 MIVARQALRQ 326


>At1g10890.1
          Length = 593

 Score = 26.2 bits (56), Expect = 5.5
 Identities = 16/42 (38%), Positives = 26/42 (61%)
 Frame = +2

Query: 254 KVSILRQSKCFVKLENNGL*LSLMKNFSKRLLVLSREKQKTR 379
           +VSIL Q +      ++GL L ++KN + RLLV +   ++TR
Sbjct: 313 QVSILDQIEVSKIFHSDGLLLCIIKNDTTRLLVWNPYLEQTR 354


>At3g03680.1
          Length = 1018

 Score = 26.2 bits (56), Expect = 5.5
 Identities = 22/89 (24%), Positives = 42/89 (47%)
 Frame = +1

Query: 4    LKFLSKVRIEFNTLDPRLASCVEFLAQCNARKAKESNPNCQVLVKRRTDEQPPQITVTFV 183
            L+F  + R++ N++DPRL SCV+ +A     +  +  P         T  QP  + + + 
Sbjct: 874  LRFRYRGRVKVNSVDPRL-SCVDSVAPDELDEEFDGFP---------TTRQPEVVRIRY- 922

Query: 184  NGVEEAFDAAATSAQSIRKMILDKGQYLE 270
                +   A A  AQ++   +  +G+ +E
Sbjct: 923  ----DRLRALAGRAQTLLGDVAAQGERVE 947


>At2g44830.1
          Length = 766

 Score = 26.2 bits (56), Expect = 5.5
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = -1

Query: 336 EKFFIRDNHRPLFSSFTKHLLCLKILTFIKNHLSNRLSRGCSCIK 202
           E   +RD+   + S F   L C    T IK   S+   RG  C++
Sbjct: 492 ENVLVRDDGHIMLSDFDLSLRCAVSPTLIKTFDSDPSRRGAFCVQ 536


>At5g46600.1
          Length = 540

 Score = 25.8 bits (55), Expect = 7.2
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
 Frame = -1

Query: 267 KILTFIKNHLSNRLSRGCSC------IKSFLNTINKSDSDLRRLLIGSTFHQNLT 121
           K+L+ +   + NR  R CS       +++ L  +N +     +L +GS  H N+T
Sbjct: 348 KVLSELSESIQNR--RHCSSEILSDSLEAALKDLNSTIKSQPKLFLGSNLHSNIT 400


>At5g43190.1
          Length = 404

 Score = 25.8 bits (55), Expect = 7.2
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = -2

Query: 362 LGLTPGASWRSSSSGIITGHCSPASRNICSVSRY*PLSR 246
           L LT  +S  SSS+G++    SP+S  + S+S + PL+R
Sbjct: 129 LSLTCASSLLSSSNGLLCFSLSPSS--VSSLSIFNPLTR 165


>At2g30930.1
          Length = 165

 Score = 25.4 bits (54), Expect = 9.4
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -1

Query: 264 ILTFIKNHLSNRLSRGCSCIKSFLNTINKSDSDLRRLLIG 145
           + T  K+ +    SRG    KS L T     SD+   L+G
Sbjct: 73  VSTQAKDAVDKAFSRGIEGAKSLLQTFEAKSSDISSKLVG 112


>At3g25010.1
          Length = 882

 Score = 25.4 bits (54), Expect = 9.4
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = -1

Query: 372 FCFSRLNTRSLLEKFFIRDNHRPLFSSFTKHLLCLKILTFIKNHLSNRLSRGCS 211
           F FS L+  S L+   + DN      SF ++L  L++L    NH S  L+   S
Sbjct: 141 FSFSNLSMLSALD---LSDNELTGSLSFVRNLRKLRVLDVSYNHFSGILNPNSS 191


>At1g32030.1
          Length = 334

 Score = 25.4 bits (54), Expect = 9.4
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 58  ASCVEFLAQCNARKAKESNPNCQVLVKRRTDEQPPQ 165
           +S    LA+ N   A   NPN +  +KR+  +  P+
Sbjct: 138 SSSSTLLAEYNTEMANPPNPNSETSLKRKHSDSEPK 173


>At1g59500.1
          Length = 598

 Score = 25.4 bits (54), Expect = 9.4
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 11/59 (18%)
 Frame = -1

Query: 270 LKILTFIKNH---LSNRLSRGCSCIKSF--------LNTINKSDSDLRRLLIGSTFHQN 127
           L+ ++F++N+   LS  +S G    K F         N +NK D +L   LIG    +N
Sbjct: 234 LRAISFLQNNWKELSQDISTGTLSSKIFDHAIKTRMSNILNKPDQELAEFLIGVCSQEN 292


  Database: ../database/ATH1_pep_20030417
    Posted date:  Feb 16, 2004  1:44 PM
  Number of letters in database: 12,141,370
  Number of sequences in database:  28,581
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,715,074
Number of Sequences: 28581
Number of extensions: 136085
Number of successful extensions: 435
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 12,141,370
effective HSP length: 88
effective length of database: 9,626,242
effective search space used: 375423438
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)