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Solanum lycopersicum mRNA Solyc01g079750.2.1

mRNA details  
Name
Solyc01g079750.2.1
Type
mRNA
Length
2,472
Organism
Solanum lycopersicum
Description
Protein serine/threonine kinase (AHRD V1 *-** D3BP85_POLPA); contains Interpro domain(s) IPR015748 Mitogen activated protein kinase kinase kinase 3
Location(s)
SL2.50ch01:78896270..78903626
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0006468
Length
7357
Nb exon
17
Sifter term
GO:0004711
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g079750.2.1 Protein serine/threonine kinase (AHRD V1 *-** D3BP85_POLPA); contains Interpro domain(s) IPR015748 Mitogen activated protein kinase kinase kinase 3

CACAAACTCCAAGAACAGTAAGGCACAAATTCAAAAAAAAGCTTTATTTTATTTTTGAAAACAAATCCCCCCATTACTTCTCAACGATCAAATGCGAATCACTGAACCCTAATCCACAACTCTCCCTCTCTTTGCTCCCTCAAAATGCAGGATTTCATCGGCTCCGTTCGCCGATCTCTAGTTTTCAAACCCTCAGGCGACTCGGAAATCGGTGCCGGCAGTGCATTTGGAGGTTTCGTTGAGAAAATCGGTTCCAGTATACGTAAATCGAGTATAGGGATCTTCTCCAAGTCTCAAGTTCCTGCTCTTCCGGCTATTTCTAAAGCCGAGTCTTTACCGGTGAAGGCGGATAAGAAAGATGATAATACGCCAATCCGCTGGAGGAAAGGTGAAATGATTGGATGTGGTGCTTTTGGTAGGGTGTATATGGGGATGAATGTTGATTCTGGAGAGCTTCTAGCTATAAAGGAGGTTTCCATTGCGATGAATGGTGCTTCAAGAGAGCGAGCTCAAGCTCATGTTAGAGAGCTCGAGGAAGAAGTGAATCTATTGAAGAATCTCTCCCATCCCAACATAGTGAGATACTTGGGAACTGCAAGAGAGGTGGGATCACTAAATATATTGTTGGAATTTGTTCCTGGTGGCTCAATCTCATCACTTTTGGGAAAATTTGGATCCTTCCCTGAATCTGTTATAAGAATGTACACCAAACAATTGTTATTGGGTCTGGAATACTTGCATAAGAATGGAATTATGCACAGAGATATTAAGGGAGCAAACATACTTGTCGATAATAAAGGTTGCATTAAACTTGCTGATTTTGGTGCATCCAAGAAGGTTGTTGAATTGGCTACTATGACTGGTGCCAAGTCCATGAAGGGTACTCCATACTGGATGGCTCCTGAAGTTATTCTGCAGACTGGCCATAGCTTCTCTGCTGACATATGGAGTGTCGGATGTACTATTATTGAAATGGCTACTGGAAAGCCTCCTTGGAGCCAGCAGTATCAGGAGGTTGCTGCTCTTTTTCATATAGGGACAACTAAATCCCATCCTCCCATCCCAGAGCATCTGTCTGCTGAAGCAAAGGACTTCCTATTAAAATGTTTGCAGAAGGAACCACACCTGAGGACTTCTGCATCAAATTTGTTACAGCATCCATTTGTTACGGGAGAGCATCAGGAAGCACACACTTTTCTTCGTTCTTCCTTTCTGGGAAATTCCGAAAACATGGCAGCACAAAGGATGGATGTTAGAACCTCAACCAATCCTGATATCAGAGCTACCTGCAATGGTTTGAAAGATGTTTGCGACGTGAGCACTGTGAGGTGCTCCACTGTATATCCTGAGAATTCATTCGGAAACGAGTCACTTTGGAAACTAGGGAATTCAGACGATGACATGTGCCAGATGGATAATGATGATTTTATGTTTGGTGCATCTGTGAAATGCAGTTCAGATTTGCATTCCCATGCTAATTATAAGAGTTTTAACCCGATGTCTGAACCTGATAATGATTGGCCTTGCAAATTCGATGAAAGTCCTGTGTTAACGAAAAGTCAAGCTAACCTTGATTTTGGTCAAGCAACTATTAAGCCCACAAATAGCCTCATCATGTCATACAAGGAGGATGCTTTTGCATTTTCAGGTGGGCAATCTGCAGCCGAGGATGATGATGAATTGACGGAGTCTAAAATTAGAGCATTCCTTGATGAAAAGGCAATGGATTTGAAGAAGCTGCAATCGCCACTATATGAAGAATTCCTTAATTCTATGAATGTTTCCAGCACCCCAAGTCTAGCTGGCATTGGGAACAAGGAAAATTTTCCAAGTAATGTTAACTTACCACCAAAAAGTAGGTCCCCAAAACGTTTTATTAGCAGAAGACTTTCTACTGCCACTGAGGGTGCTTGTGCTCCCAGCCCAGTTACTCACTCCAAGAGAATATCAAATATTGGTGGCTTAGGTAATGAAGCTATTCAGGAACTTCAATCACCAAGGAACAATGAATGGAAAGATCCTCTTGGTTCTCAACGTGACGCTGTCAATTCAAGCTTCTCTGAGAGGCAAAGAAAGTGGAAAGAAGAGCTTGATGAAGAGTTGCAAAGGAAACGAGAGATTATGCGTCAGGCTGTCAACTTGTCTCCCCCAATGGATCCGGTTTTAAATCGATGTAGAAGTAAATCAAGGTTTGCATCTCCTGGGAGATAAATGTATGTACCCTTGACTCTAAATTAAAGTCAGCTTGAAGAATATATTCGTGATCCTGCAATCACAGAACAGAGACTTAGATGTCTTGGCCAGGTAGACAAATGTGTGGTTTTCTTAGAGGATTAGAGGTTCTCATCAAATGACGAAATGAGCTGTTACTACAGGATCATCAGCGCTCATCAGGTTGAGTGAGCTGTTACTGCAGAAATATATCTCCAAATCTTGTGATAAAATATCAATAATTTGTTGTGTACATTTTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g079750.2.1SL2.50ch01:78896530..78903482689-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g079750.2SL2.50ch01:78896270..789036267,357-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g079750.2.1.1SL2.50ch01:78903156..78903626471-n/a
exonexon:Solyc01g079750.2.1.10SL2.50ch01:78900042..7890008140-n/a
exonexon:Solyc01g079750.2.1.11SL2.50ch01:78899793..7889985260-n/a
exonexon:Solyc01g079750.2.1.12SL2.50ch01:78899665..7889971147-1
exonexon:Solyc01g079750.2.1.13SL2.50ch01:78899347..78899569223-n/a
exonexon:Solyc01g079750.2.1.14SL2.50ch01:78899032..78899265234-n/a
exonexon:Solyc01g079750.2.1.15SL2.50ch01:78898412..78898746335-1
exonexon:Solyc01g079750.2.1.16SL2.50ch01:78898269..7889833062-2
exonexon:Solyc01g079750.2.1.17SL2.50ch01:78896270..78896625356-n/a
exonexon:Solyc01g079750.2.1.2SL2.50ch01:78902975..7890301642-n/a
exonexon:Solyc01g079750.2.1.3SL2.50ch01:78902584..7890264966-n/a
exonexon:Solyc01g079750.2.1.4SL2.50ch01:78902398..78902508111-n/a
exonexon:Solyc01g079750.2.1.5SL2.50ch01:78901898..7890197881-n/a
exonexon:Solyc01g079750.2.1.6SL2.50ch01:78901722..7890179978-n/a
exonexon:Solyc01g079750.2.1.7SL2.50ch01:78901554..7890163683-1
exonexon:Solyc01g079750.2.1.8SL2.50ch01:78900494..7890057582-n/a
exonexon:Solyc01g079750.2.1.9SL2.50ch01:78900292..78900392101-1
intronintron:Solyc01g079750.2.1.10SL2.50ch01:78900082..78900291n/a-n/a
intronintron:Solyc01g079750.2.1.11SL2.50ch01:78899853..78900041n/a-n/a
intronintron:Solyc01g079750.2.1.12SL2.50ch01:78899712..78899792n/a-n/a
intronintron:Solyc01g079750.2.1.13SL2.50ch01:78899570..78899664n/a-n/a
intronintron:Solyc01g079750.2.1.14SL2.50ch01:78899266..78899346n/a-n/a
intronintron:Solyc01g079750.2.1.15SL2.50ch01:78898747..78899031n/a-n/a
intronintron:Solyc01g079750.2.1.16SL2.50ch01:78898331..78898411n/a-n/a
intronintron:Solyc01g079750.2.1.17SL2.50ch01:78896626..78898268n/a-n/a
intronintron:Solyc01g079750.2.1.2SL2.50ch01:78903017..78903155n/a-n/a
intronintron:Solyc01g079750.2.1.3SL2.50ch01:78902650..78902974n/a-n/a
intronintron:Solyc01g079750.2.1.4SL2.50ch01:78902509..78902583n/a-n/a
intronintron:Solyc01g079750.2.1.5SL2.50ch01:78901979..78902397n/a-n/a
intronintron:Solyc01g079750.2.1.6SL2.50ch01:78901800..78901897n/a-n/a
intronintron:Solyc01g079750.2.1.7SL2.50ch01:78901637..78901721n/a-n/a
intronintron:Solyc01g079750.2.1.8SL2.50ch01:78900576..78901553n/a-n/a
intronintron:Solyc01g079750.2.1.9SL2.50ch01:78900393..78900493n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17683614%2Fdetails feature 17683614
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