Solanum lycopersicum mRNA Solyc02g085610.2.1

mRNA details  
Name
Solyc02g085610.2.1
Type
mRNA
Length
1,176
Organism
Solanum lycopersicum
Description
G-box binding factor (AHRD V1 **** Q43449_SOYBN); contains Interpro domain(s) IPR011616 bZIP transcription factor, bZIP-1
Location(s)
SL2.50ch02:48432269..48437597
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0006355
Length
5329
Nb exon
9
Sifter term
GO:0043565
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g085610.2.1 G-box binding factor (AHRD V1 **** Q43449_SOYBN); contains Interpro domain(s) IPR011616 bZIP transcription factor, bZIP-1

TTTAGGCTTATTATAGTGCTGGAGCTACTCCTCCTTTTTTTGCCTCACCTGTTGCTTCTCCTGCTCCCCACCCATACATGTGGGGAGGTCAGCATCCTCTTATGCCTCCTTATGGGACTCCAGTTCCATATCCAGCTTTATATCCTCCTGCCGGAGTTTATGCTCATCCTAACATTGCCACGCCGGCTCCAAATTCTGTGCCGGCAAATCCTGAAGCAGATGGGAAGGGGCCTGAAGGAAAGGATCGGAATTCAAGTAAAAAGTTAAAGGTCTGTTCTGGTGGTAAGGCAGGCGACAATGGGAAAGTTACTTCAGGTTCCGGAAATGATGGTGCCACACAAAGTGATGAAAGCAGAAGTGAAGGTACATCAGATACAAATGATGAAAATGATAACAATGAATTTGCTGCAAACAAGAAGGGAAGCTTTGATCAAATGCTTGCAGATGGAGCCAGTGCACAGAATAATCCTGCGAAAGAGAATCACCCGACTTCTATACATGGAAATCCTGTCACCATGCCTGCAACTAACCTAAATATTGGAATGGACGTGTGGAATGCATCAGCTGCCGGTCCTGGAGCGATCAAAATACAGCAAAATGCAACTGGTCCAGTTATAGGACATGAAGGAAGGATGAATGATCAGTGGATTCAGGAGGAACGTGAACTTAAAAGGCAAAAGAGAAAGCAATCTAATAGGGAGTCAGCTAGGAGGTCGAGGCTCCGCAAGCAGGCAGAGTGTGAAGAGCTACAACGTAGAGTAGAAGCTTTGAGCCATGAGAATCATTCACTCAAAGATGAGCTCCAACGGCTCTCTGAGGAATGTGAGAAGCTTACCTCGGAGAATAATTTAATTAAGGAAGAGTTAACGCTACTTTGTGGACCAGACGTTGTGTCTAAGCTGGAGAGAAACGATAATGTCACACGTATTCAATCTAATGTTGAAGAAGCTAGTTAAGGAGAAGTGGAAAAGCCAGGACTGAGTAGGTGATTTTTGTTACAAAGTGCTCACAGATCATTGCCTTTTTGGTGCAGTGTTTGTTGTCCTACTAACCTATACCCTCCTTTAACTCCCTTTCTGAGTATGACTGTAACATATATTTCTTATGATTCTAACCCCAGTGTTAAAAGAGTCTTGAGTCTGTTTAACTTAGTCTTTAAATTAACTTCAGTAGCTC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g085610.2.1SL2.50ch02:48432488..48437381285-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g085610.2SL2.50ch02:48432269..484375975,329-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g085610.2.1.1SL2.50ch02:48437506..4843759792-n/a
exonexon:Solyc02g085610.2.1.2SL2.50ch02:48437301..4843739090-n/a
exonexon:Solyc02g085610.2.1.3SL2.50ch02:48437013..48437173161-1
exonexon:Solyc02g085610.2.1.4SL2.50ch02:48436874..4843692855-n/a
exonexon:Solyc02g085610.2.1.5SL2.50ch02:48436692..4843674049-2
exonexon:Solyc02g085610.2.1.6SL2.50ch02:48436404..48436609206-n/a
exonexon:Solyc02g085610.2.1.7SL2.50ch02:48435516..4843559378-n/a
exonexon:Solyc02g085610.2.1.8SL2.50ch02:48432870..48432995126-n/a
exonexon:Solyc02g085610.2.1.9SL2.50ch02:48432269..48432587319-n/a
intronintron:Solyc02g085610.2.1.2SL2.50ch02:48437391..48437505n/a-n/a
intronintron:Solyc02g085610.2.1.3SL2.50ch02:48437174..48437300n/a-n/a
intronintron:Solyc02g085610.2.1.4SL2.50ch02:48436929..48437012n/a-n/a
intronintron:Solyc02g085610.2.1.5SL2.50ch02:48436741..48436873n/a-n/a
intronintron:Solyc02g085610.2.1.6SL2.50ch02:48436610..48436691n/a-n/a
intronintron:Solyc02g085610.2.1.7SL2.50ch02:48435594..48436403n/a-n/a
intronintron:Solyc02g085610.2.1.8SL2.50ch02:48432996..48435515n/a-n/a
intronintron:Solyc02g085610.2.1.9SL2.50ch02:48432588..48432869n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17737357%2Fdetails feature 17737357
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)