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Solanum lycopersicum mRNA Solyc05g047460.2.1

mRNA details  
Name
Solyc05g047460.2.1
Type
mRNA
Length
3,602
Organism
Solanum lycopersicum
Description
Auxin response factor 19 (AHRD V1 ***- D9IA29_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor
Location(s)
SL2.50ch05:58904394..58910449
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0046983
  • GO:0006355
Length
6056
Nb exon
13
Sifter term
GO:0046983
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g047460.2.1 Auxin response factor 19 (AHRD V1 ***- D9IA29_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor

ATGAAGACGCCGGGAAATGGTGCCGGTGGTGGCAATGTTAATCCAGCTGAAGGAGAGAAGAAGAACTTAAATCCAGAGCTATGGCAAGCTTGCGCCGGACCTCTGGTGAACTTGCCTGTTGCTGGAACACATGTTGTCTACTTTCCTCAAGGCCACAGTGAACAGGTTGCTGCATCTATCAAGAAGGATGTGGAAGCCCAAATTCCAAACTATCCAAACCTGCCGGCAAAGTTAATTTGTCTTCTGCACAATGTTACCCTTCATGCTGATCCTGAAACAGATGAAGTGTATGCTCAAATGACACTACAACCAGTTCCTTCATTTGACAAGGAGGCATTATTGAGGTCAGATTTGTCTATGAAAGCAAATAAACCACAACCAGAATTTTTTTGCAAAACCTTGACGGCAAGTGATACTAGCACTCATGGTGGTTTCTCTGTACCTCGGCGTGCAGCTGAGAAAATATTCCCTCCTTTGGATTACTCTCTGCAGCCACCTGCTCAAGAACTTGTGGCTAGAGACTTGCATGATAACATATGGACTTTCCGACATGTTTATCGAGGGCAACCGAAACGACACTTATTAACAACCGGGTGGAGCCTAGTTGTGAGTGGAAAAAGGCTTTTTGCAGGTGACTCGGTCTTGTTTATTAGGGATGAAAAACATCAGTTTCTACTAGGAATTAGAAAGGCTAATAGGCAGCCTACCAACTTATCGTCATCAGTGTTATCAAGTGATAGCATGCATATTGGTATCCTAGCAGCAGCAGCACATGCAGCTGCAAACAACAGTCCTTTCACTGTCTTCTATAACCCAAGGGCTGGTCCTTCTGAATTTGTAATTCCTTTAGCAAAGTACTACAAAGCAACTTATAGCAGTCAAATATCTCTTGGCATGAGGTTTCGCATGATGTTTGAGACTGAAGAATCTGGAACTAGAAGGTATATGGGCACAATTACTGGCATTAGTGATCTGGATCCAGTGAGGTGGAAGAACTCTCAATGGCGGAATTTGCAGGTTGGTTGGGATGAGTCGACTGCTGGAGAGAGGATCAACCGAGTCTCTATTTGGGAGATTGAACCGATAACAGCACCATTTTTGATCTGTTCTAGTCCATTCTTCAGTTCCAAGCGTCCAAGGCAACCCGGAATGCCAGATGGTGATTATTCTGATATGGATGGCATGTTCAAGAGGACAATGCCATGGCTTGGTGATGATTTTGGCATGGCAGATCCTCAAGGTCTGCCTGGTCTTAGCTTAATCCAATGGATGAACATGCAGAAGAATCCTTCTTTGGCTAACCCGATGATCCCCAACTATATGAATTCCCTATCTGGTTCTGCTCTACAAAACCTTGCTGGAGCAGACCTATCACGCCAGTTAGGTATGGCAGCACCGCAATTTCAGCAGCAGCAGCAAATGCAGCACAACTTGCAGTTCAATAATGCCCATAGGCCAAACCAGCAGCTTGACCAGCTCCAGAAGTTACCAGCAGCAGCGCTGAACTCGTTAGACTCTATTATGCAATCACAGCAACAGTTATCTGATGTCAGTCAGCAACCAAGACAAAATCTAACTACTCAGTCACTGCCTACAACCCAAGTTCACACACAGCATATACAAGCGCAGAGTCTTGGGCAATCTCAGAACGTTCTTCCGCCGCAACAATCAGTTCAAAATCAAAACCAACTGCAAAGAAACCTCCCCCAGAGCCTATCACAGCAACATCCACAACAACAGATTCTGGGTCAGACTCAGCAGCAAAGTTTCATGTCATCCCAGGCCCCAGATCCAGTTAACCAACAACAGCATTTCTCTGATAACCAAGCACAGCTTCAAATGCTACAAAAACTACATCAACAACAAAAATCACTTCTAGCACAACAATCTGGATTACAGCAACCTTCACAACTTGGGTCAATCCAGGATCACCAGAAGCAGCTCATGGATGCATCACAGAACTTTTCCAGGTCACTTGCGACAAACCAAATGTTGGATGCGTCTCAAACCACGTCCACTTCACTTCCTCACTCGCAAGTTGTTCAGCAGCAAATGACGAGAATAAATAGTCCGTCCAATCTTCGGTTTTCCCAGCCAACTCAGCAACCAAAGCTTCAGCAGCAGCAATCTGGTAACCTGTCAGACCTATCTGGACCAGTTAACTACCCTCTACCCCGAACGTCTTATCAGCTTTCCGCAAATGGCAGTAATTTAACAGGAACTGCAGGGGGAGGGCAGTCTGTGGTAATTGATGATGTCCCATCATGGTCCACCTCGGTTTCCACTAATAACTGTCATAGTGTAGTTCAGCCAAATATGAATGGTCGAATCACAGGTGCACGGGATGAAATGACCCACTGTTCTGGACCCTTAGAAGTTATGTCTGCAAATAACAACCTGCAGCCAAAGTCTGATGTTAAACCTTCAGTAAACGTCGTCTCCAAGAGCCAGAACCATGGGTTTTTGGCACCTCAAACTCTTAACACTTCAGGAATACAGTTTGATTATTTGGATAGTTCATCTTCAGCAACTTCAGCTTGCCTTTCCCAAAATGATGTTCAATTGCAGCAGACTGCTACAGACCCATTATCTGGCAGTTCTCAGCCATTGATATTCAGAGATAGTCCAGATGGAGGAGAAGTTCAGGGTGACCCGAGAAACAATGTAGCTTTTGGAGCAGCAAACATGGAAAATAATCAGTTAGGACTGCCTATGATACCTGATCCTTTGATCACTAAAAGCTCAATGGGATCAAGGAAGGATTTCTCAGACAATCTCTCATCAGGAGGCGGCATGCTCTCCAGCTATGAGAACCCCAAGGAAGCACAGCCTGAACTCTTGGCCTCAATGGCTTCCGATTATGTCACCTTTAATTCAATTGATTCTACTATCAATGATGGTAGCTTCATGGATAGAGGCGCCTGGGAGCCACCACCTCAACTGCCTCGTTTGCGGACATATACCAAGGTGTACAAGCGTGGTGCAGTAGGAAGATCAATTGATATTGCACGGTACTCAGGCTATGAGGAACTTAAACTAGATTTGGCTCGTAGATTCGGTATAGAGGGACAACTGGAGGACAGACAAAGAATAGGATGGAAGCTTGTGTATGTTGATCACGAAAACGATGTTCTCCTGGTTGGTGATGACCCCTGGGAGGAATTCGTGAGCTGTGTCCGCTGCATCAAGATTCTTTCTCCACAAGAAGTTCAACAAATGAGCTTGGATGGAGATTTTGGAGGTAGTGTCCTTCAAAACCAAGATTGTAGCAGTTCAGACGCGGGAGATGTGTAATTATAGCAAGGCTAAAGTTGTTAACAATTCTTTTGAAGCTGGAAACTTACACAAATATAGCTTCTAGGTAATCAGTTGCTCCATCAAAGTGATTCCTTCTAGTATACACCACAGTACAGTAAGCAAGCCAGCTGCTAGCTCTTCATGGGATCTTGGTATATTTAATGATCCCTTGATGTAACAAAGCTGATGCTAATCTTTGATAAGAGAAAAAAGTTAGTAAGGGAAGTCATCACCATTGCTGCTAGAGGGTAATGTGCTCTAGCATAGTTGTTAAGGCAATAGAAGTATGGTGGATCCCAACTTCT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g047460.2.1SL2.50ch05:58904701..589104491,098-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g047460.2SL2.50ch05:58904394..589104496,056-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g047460.2.1.1SL2.50ch05:58910398..5891044952-2
exonexon:Solyc05g047460.2.1.10SL2.50ch05:58907257..58907395139-2
exonexon:Solyc05g047460.2.1.11SL2.50ch05:58905233..589070431,811-n/a
exonexon:Solyc05g047460.2.1.12SL2.50ch05:58904956..58905146191-1
exonexon:Solyc05g047460.2.1.13SL2.50ch05:58904394..58904837444-n/a
exonexon:Solyc05g047460.2.1.2SL2.50ch05:58909568..58909680113-n/a
exonexon:Solyc05g047460.2.1.3SL2.50ch05:58908925..5890902399-n/a
exonexon:Solyc05g047460.2.1.4SL2.50ch05:58908771..5890882757-n/a
exonexon:Solyc05g047460.2.1.5SL2.50ch05:58908487..58908642156-n/a
exonexon:Solyc05g047460.2.1.6SL2.50ch05:58908317..5890840185-2
exonexon:Solyc05g047460.2.1.7SL2.50ch05:58908127..5890821791-1
exonexon:Solyc05g047460.2.1.8SL2.50ch05:58907800..58907964165-1
exonexon:Solyc05g047460.2.1.9SL2.50ch05:58907479..58907677199-n/a
intronintron:Solyc05g047460.2.1.10SL2.50ch05:58907396..58907478n/a-n/a
intronintron:Solyc05g047460.2.1.11SL2.50ch05:58907044..58907256n/a-n/a
intronintron:Solyc05g047460.2.1.12SL2.50ch05:58905147..58905232n/a-n/a
intronintron:Solyc05g047460.2.1.13SL2.50ch05:58904838..58904955n/a-n/a
intronintron:Solyc05g047460.2.1.2SL2.50ch05:58909681..58910397n/a-n/a
intronintron:Solyc05g047460.2.1.3SL2.50ch05:58909024..58909567n/a-n/a
intronintron:Solyc05g047460.2.1.4SL2.50ch05:58908828..58908924n/a-n/a
intronintron:Solyc05g047460.2.1.5SL2.50ch05:58908643..58908770n/a-n/a
intronintron:Solyc05g047460.2.1.6SL2.50ch05:58908402..58908486n/a-n/a
intronintron:Solyc05g047460.2.1.7SL2.50ch05:58908218..58908316n/a-n/a
intronintron:Solyc05g047460.2.1.8SL2.50ch05:58907965..58908126n/a-n/a
intronintron:Solyc05g047460.2.1.9SL2.50ch05:58907678..58907799n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17827995%2Fdetails feature 17827995
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