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Solanum lycopersicum mRNA Solyc09g092470.2.1

mRNA details  
Name
Solyc09g092470.2.1
Type
mRNA
Length
1,874
Organism
Solanum lycopersicum
Description
Alpha-humulene/(-)-(E)-beta-caryophyllene synthase (AHRD V1 **** HUMS_ARATH); contains Interpro domain(s) IPR005630 Terpene synthase, metal-binding domain
Location(s)
SL2.50ch09:71554973..71557833
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0016829
  • GO:0008152
Length
2861
Nb exon
7
Sifter term
  • GO:0080017
  • GO:0080016
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc09g092470.2.1 Alpha-humulene/(-)-(E)-beta-caryophyllene synthase (AHRD V1 **** HUMS_ARATH); contains Interpro domain(s) IPR005630 Terpene synthase, metal-binding domain

ATGGCAACAAATCTCACATTAGAGACAGATAAAGAAATTAAAAATATGAATCAATTATCAATGATTGATACTACTATTACACGTCCATTGGCAAATTATCACTCAAGTGTATGGAAAAACTATTTTCTCTCCTACACTCCTCAACTCACAGAAATTAGTAGCCAAGAAAAACTTGAACTTGAAGAGTTGAAAGAAAAAGTAAGGCAAATGTTAGTGGAAACTTCTGATAAAAGTACACAAAAACTTGTCTTGATTGACACAATTCAACGATTGGGAGTGGCATATCATTTCGATAATGAGATCAAAATATCTATTCAGAATATTTTTGATGAGTTTGAGCAGAATAAAAATGAAGATGATAACGATCTTTACATTGTTGCTCTTCGTTTTCGACTAGTGAGAGGACAAAGGCATTACATGTCTTCTGATGTGTTCAAAAAGTTCACAAACGATGATGGAAAATTCAAGGAAACTCTTACTAAAGATGTTCAAGGCTTATTAAATCTATATGAAGCAACACATCTAAGAGTACACGGAGAACAAATTCTTGAAGAAGCTCTATCTTTTACCGTTACTCATCTCAAGTCCATGAGCCCTAAATTGGACAGTTCACTCAAGGCCCAAGTTAGTGAAGCCTTGATCCAGCCCATTTACACAAATGTACCAAGAGTGGTAGCTCCTAAATACATACGTATTTACGAGAACATTGAATCACACGATGATTTACTTTTGAAATTTGTAAAGTTGGATTTCCACATTTTGCAAAAGATGCACCAAAGAGAGCTTAGTGAACTTACAAGGTGGTGGAAAGATCTAGATCATTCAAACAAATATCCATATGCAAGAGACAAACTAGTGGAATGTTATTTTTGGGCAACAGGGGTGTATTTTGGGCCACAATACAAACGTGCAAGAAGAATGATAACAAAATTAATCGTTATCATTACAATTACTGATGATCTATATGATGCTTATGCAACTTATGACGAACTTGTGCCCTACACTAATGCAGTCGAAAGATGTGAAATTAGTGCTATGGATTCGATATCGCCCTATATGAGACCTCTTTATCAAGTATTTTTAGATTATTTTGACGAAATGGAAGAAGAATTGACCAAAGATGGTAAAGCACACTATGTCTACTATGCAAAAGTTGAGATGAATAAGTTGATCAAAAGCTATCTTAAGGAAGCAGAATGGTTGAAAAATGACATTATACCAAAATGTGAGGAATATAAGAGAAATGCTACTATAACGGTAGCCAATCAAATGATTTTGATTACTTGTTTGATTGTTGCGGGCGAATTTATATCCAAGGAGACTTTTGAATGGATGATAAATGAGTCTTTGATCGCTCCAGCTTCATCACTAATCAATCGACTAAAAGACGATATTATTGGACATGAACACGAACAACAAAGAGAGCATGGAGCTTCATTCGTTGAATGTTACGTGAAAGAATATAGAGCTTCAAAACAAGAGGCATATGTTGAGGCTCGTAGGCAAATAGCAAATGCATGGAAAGATATAAACACAGATTATTTACATGCTACTCAAGTACCAACGTTTGTACTACAACCTGCATTGAATCTTTCACGTCTCGTAGATATTCTCCAAGAGGATGATTTTACAGATTCACAAAACTTCCTTAAAGACACAATCAAATTGTTGTTTGTTGACTCTGTCAATAGTACATCATGTGGATAATCGAACTATTCATCAAGTGTACGTTTTAAGCAAACAATGTGTGTGTTTGAGGTGGATGGGTAGGGGGTGTGACATGTTGTGTTTGTTTGCACTCATATTTTCTTTTAATAAAATGTAATAATAATAAATGAAGTTGTATTGAAGCTGGTTCATTTTCATTTTGAAAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc09g092470.2.1SL2.50ch09:71555139..71557833569-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc09g092470.2SL2.50ch09:71554973..715578332,861-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc09g092470.2.1.1SL2.50ch09:71557684..71557833150-n/a
exonexon:Solyc09g092470.2.1.2SL2.50ch09:71557036..71557312277-2
exonexon:Solyc09g092470.2.1.3SL2.50ch09:71556461..71556833373-1
exonexon:Solyc09g092470.2.1.4SL2.50ch09:71556146..71556364219-1
exonexon:Solyc09g092470.2.1.5SL2.50ch09:71555912..71556050139-n/a
exonexon:Solyc09g092470.2.1.6SL2.50ch09:71555538..71555786249-n/a
exonexon:Solyc09g092470.2.1.7SL2.50ch09:71554973..71555439467-n/a
intronintron:Solyc09g092470.2.1.2SL2.50ch09:71557313..71557683n/a-n/a
intronintron:Solyc09g092470.2.1.3SL2.50ch09:71556834..71557035n/a-n/a
intronintron:Solyc09g092470.2.1.4SL2.50ch09:71556365..71556460n/a-n/a
intronintron:Solyc09g092470.2.1.5SL2.50ch09:71556051..71556145n/a-n/a
intronintron:Solyc09g092470.2.1.6SL2.50ch09:71555787..71555911n/a-n/a
intronintron:Solyc09g092470.2.1.7SL2.50ch09:71555440..71555537n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17941457%2Fdetails feature 17941457
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