Forum Topic: Nomenclature conversion: SGN-U111111 VS. Solyc01g111111.1.1 (please help!!)

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Nomenclature conversion: SGN-U111111 VS. Solyc01g111111.1.1 (please help!!)

Hi, I would like to know if there is a straightforward way to translate the one nomenclature to the other. Both refer to genes/loci/protein, right... but if I have to compare to see coincidences from one list in one format and one list in the other (having hundreds of proteins/genes in each list), I can die doing searches and endless alignments, and still not accomplishing the job... Please help. Thank you very much.

This topic was started by Karel De Pourcq.
Posted by Jan Wahmes on 2013-11-07 08:11:59
 
Hey, same problem here. Can't compare my results to previous work where the old nomenclature was used and would greatly appreciate any help on this.
Posted by Lukas Mueller (curator) on 2014-01-19 23:03:39
 
You can use the new converter at [url]http://solgenomics.net/tools/bulk?mode=converter[/url].
Let me know if you have any problems.
cheers
Lukas
Posted by Lewis Watt on 2014-03-27 04:44:15
 
I have had a similar problem to the other users, I have tried using the ID converter. However, it is only able to convert SGN IDs to Solyc IDs, and not the otherway around. I can not find any application to convert Solyc IDs into any other format. Please help me!
Lewis
Posted by on 2021-11-12 06:42:39
 
Solyc01g111111.1.1 is a gene that encodes for an enzyme called NAD(P)H-dependent malic enzyme, which has an important role in the metabolism of glucose and synthesis of amino acids. This gene was found to have high expression https://www.superiorpapers.com/case-study-writing-service.php levels in young leaves compared to mature leaves, which suggests that Solyc01g111111.1.1 may be involved early on in photosynthesis or starch storage during seedling development (Li et al., 2014).
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