The gene models have been created with the Maker software using as gene 
predictors Augustus and SNAP.

  Input: 
  + Genome: Niben.genome.v0.4.4.scaffold.nrcontigs.fasta
  + Transcriptome: Niben.mRNA.v0.1.fasta (RNAseq experiments assembly)
  + Proteome: Protein sequences from Tomato ITAG2.3 and Solanaceae SwissProt
  + RepeatSet: Repeat produced previously by RepeatModeler.

  Results:
  + 52,972 Maker gene models supported by two gene predictors.
  + 48,342 Non overlap gene model set of which:
    * 9,545 Augustus predicted proteins.
    * 38,797 SNAP predicted proteins.

  To create a masterset, Maker overlap gene models were complemented with
  the non overlapping gene models with a length > 99 Aa or with a blast
  match with the ITAG2.3 tomato gene models.

  Please, read DATA_AGREEMENT file before use the annotation data. For any
  questions please contact with Prof. Greg Martin (gbm7@cornell.edu) or 
  Dr. Lukas Mueller (lam87@cornell.edu)


                                               Ithaca, NY, October 5th. 2012