#Draft Tomato chromosome 3
#autogenerated-by SGN mummer/phrap AGP generator (bsub_generate_agp.pl)
S.lycopersicum-chr3	1	54000000	1	N	54000000	contig	no	
S.lycopersicum-chr3	54000001	54134937	2	F	C03HBa0007J09.1	1	134937	+
S.lycopersicum-chr3	54134938	56100000	3	N	1965063	contig	no	
S.lycopersicum-chr3	56100001	56226965	4	F	C03HBa0127K18.1	1	126965	+
S.lycopersicum-chr3	56226966	69000000	5	N	12773035	contig	no	
S.lycopersicum-chr3	69000001	69082956	6	F	C03HBa0040F22.1	1	82956	+
S.lycopersicum-chr3	69082957	72000000	7	N	2917044	contig	no	
S.lycopersicum-chr3	72000001	72165849	8	F	C03HBa0054O21.1	1	165849	+
S.lycopersicum-chr3	72165850	78750000	9	N	6584151	contig	no	
S.lycopersicum-chr3	78750001	78867727	10	F	C03HBa0233O20.1	1	117727	+
S.lycopersicum-chr3	78867728	92250000	11	N	13382273	contig	no	
S.lycopersicum-chr3	92250001	92352153	12	F	C03HBa0323D22.1	1	102153	+
S.lycopersicum-chr3	92352154	99750000	13	N	7397847	contig	no	
S.lycopersicum-chr3	99750001	99863681	14	F	C03HBa0012D06.1	1	113681	+
S.lycopersicum-chr3	99863682	102750000	15	N	2886319	contig	no	
S.lycopersicum-chr3	102750001	102876477	16	F	C03HBa0034B23.2	1	126477	+
S.lycopersicum-chr3	102876478	103500000	17	N	623523	contig	no	
S.lycopersicum-chr3	103500001	103623316	18	F	C03HBa0033A22.1	1	123316	+
S.lycopersicum-chr3	103623317	120000000	19	N	16376684	contig	no	
S.lycopersicum-chr3	120000001	120119102	20	F	C03HBa0001E24.1	1	119102	+
S.lycopersicum-chr3	120119103	123000000	21	N	2880898	contig	no	
S.lycopersicum-chr3	123000001	123031852	22	F	C03HBa0295I12.1	1	31852	+
S.lycopersicum-chr3	123031853	126750000	23	N	3718148	contig	no	
S.lycopersicum-chr3	126750001	126940913	24	F	C03HBa0143N09.1	1	190913	+
S.lycopersicum-chr3	126940914	128250000	25	N	1309087	contig	no	
S.lycopersicum-chr3	128250001	128369955	26	F	C03HBa0030O03.1	1	119955	+
# END OF DRAFT CHROMOSOME BUILD.  THE LINES BELOW CONTAIN SEQUENCES THAT COULD NOT BE LOCATED ON THE PHYSICAL MAP
S.lycopersicum-chr3	128369956	750000000000	27	N	749871630045	contig	no	
S.lycopersicum-chr3	750000000001	750000120802	28	F	C03HBa0030F10.1	1	120802	+