<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 06:52:46"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C00HBa0030F21-A8fDs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C00HBa0030F21-A8fDs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0030F21-A8fDs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E356265" ref_strand="+" ref_description="SGN-E356265 [cTOS-20-L22]">
      <seq>aaaggtggagtgtctagtaacaacctcaatattccttagaccgttacaatggatgaatgataatttgggataagtattcttccatgagtagaagtcgagtacttagtagtgataccttaacctatagttaattggtgtaatgaaagtctaataccccgtgagaattgatacttagcaccgaaaggatatgaattggggtggatattcttcgcgagtagaggtgtcgtgtctagtatcgacctcttgagatgggtactctctgtgagtagaggtgtagtatttagaagccatctccctattccttaactatatgcccatatagcattagctagtggttcgccacgtaaagtctaaaagaataaccctatcttaagcaagaggggatccctcatccagtaggggttaatatcgggagtccatgtcaagctctcatagtaaatgtctattaaatcttacccataaaataaagtaatgaactaggtcttcctaagggtgagctacttttggtaggtgttggaatgggactgatgcttcaatatgcgtatcttttatatttcgtgatcaattactctaacccaaaatttgagtgtctacgaatcgaagttagtaaagtaaccaaacaaacggttggggtcatgtcccaagaaagttgttgtacaagtaatagctacttagaatttcattatacatagtgatagctncagacatttttgagaattaaacaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0030F21-A8fDs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C00HBa0030F21.1" temp_strand="+" temp_description="C00HBa0030F21.1  AC232688.1 htgs_phase:1 submitted_to_sgn_as:gi|206597340|gb|AC232688.1| upload_account_name:france Solanum lycopersicum chromosome 0 clone C00HBa0030F21, *** SEQUENCING IN PROGRESS ***, 17 unordered pieces">
        <position start="107366" stop="108694"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107666" g_stop="108394" g_length="729"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="728" r_length="728" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0030F21.1" gen_strand="+" ref_id="SGN-E356265" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>729</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0030F21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356265" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107666" e_stop="108394"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGGTGGAGTGTCTAGTAACAACCTCAATATTCCTTAGACCGTTACAATGGATGAATGATAATTTGGGATAAGTATTCTTCCATGAGTAGAAGTCGAGTACTTAGTAGTGATACCTTAACCTATAGTTAATTGGTGTAATGAAAGTCTAATACCCCGTGAGAATTGATACTTAGCACCGAAAGGATATGAATTGGGGTGGATATTCTTCGCGAGTAGAGGTGTCGTGTCTAGTATCGACCTCTTGAGATGGGTACTCTCTGTGAGTAGAGGTGTAGTATTTAGAAGCCATCTCCCTATTCCTTAACTATATGCCCATATAGCATTAGCTAGTGGTTCGCCACGTAAAGTCTAAAAGAATAACCCTATCTTAAGCAAGAGGGGATCCCTCATCCAGTAGGGGTTAATATCGGGAGTCCATGTCAAGCTCTCATAGTAAATGTCTATTAAATCTTACCCATAAAATAAAGTAATGAACTAGGTCTTCCTAAGGGTGAGCTACTTTTGGTAGGTGTTGGAATGGGACTGATGCTTCAATATGCGTATCTTTTATATTTCGTGATCAATTACTCTAACCCAAAATTTGAGTGTCTACGAATCGAAGTTAGTAAAGTAACCAAACAAACGGTTGGGGTCATGTCCCAAGAAAGTTGTTGTACAAGTAATAGCTACTTAGAATTTCATTATACATAGTGATAGCTCAAGACATTTTTGAGAATTAAAACAAAAT</genome_strand>
        <mrna_strand>AAAGGTGGAGTGTCTAGTAACAACCTCAATATTCCTTAGACCGTTACAATGGATGAATGATAATTTGGGATAAGTATTCTTCCATGAGTAGAAGTCGAGTACTTAGTAGTGATACCTTAACCTATAGTTAATTGGTGTAATGAAAGTCTAATACCCCGTGAGAATTGATACTTAGCACCGAAAGGATATGAATTGGGGTGGATATTCTTCGCGAGTAGAGGTGTCGTGTCTAGTATCGACCTCTTGAGATGGGTACTCTCTGTGAGTAGAGGTGTAGTATTTAGAAGCCATCTCCCTATTCCTTAACTATATGCCCATATAGCATTAGCTAGTGGTTCGCCACGTAAAGTCTAAAAGAATAACCCTATCTTAAGCAAGAGGGGATCCCTCATCCAGTAGGGGTTAATATCGGGAGTCCATGTCAAGCTCTCATAGTAAATGTCTATTAAATCTTACCCATAAAATAAAGTAATGAACTAGGTCTTCCTAAGGGTGAGCTACTTTTGGTAGGTGTTGGAATGGGACTGATGCTTCAATATGCGTATCTTTTATATTTCGTGATCAATTACTCTAACCCAAAATTTGAGTGTCTACGAATCGAAGTTAGTAAAGTAACCAAACAAACGGTTGGGGTCATGTCCCAAGAAAGTTGTTGTACAAGTAATAGCTACTTAGAATTTCATTATACATAGTGATAGCTNCAGACATTTTTGAGAATT-AAACAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C00HBa0030F21-A8fDs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E356905" ref_strand="+" ref_description="SGN-E356905 [cTOS-22-B19]">
      <seq>aggtggagtgtctagtaacaacctcaatattccttagaccgttacaatggatgattgataatttgggataagtattcttccatgagtagaagtcgagtacttagtagtgataccttaacctatagttaattggtgtaatgaaagtctaataccccgtgagaattgatacttagcaccgaaaggatatgaattggggtggatattcttcgcgagtagaggtgtcgtgtctagtatcgacctcttgagatgggtactctctgtgagtagaggtgtagtatttagaagccatctccctattccttaactatatgcccatatagcattagctagtggttcgccacgtaaagtctaaaagaataaccctatcttaagcaagaggggatccctcatccagtaggggttaatatcgggagtccatgtcaagctctcatagtaaatgtctattaaatcttacccataaaataaagtaatgaactaggtcttcctaagggtgagctacttttggtaggtgttggaatgggactgatgcttcaatatgcgtatcttttatatttcgtgatcaattactctaacccaaaatttgagtgtctacgaatcgaagttagtaaagtaaccaaacaaacggttggggtcatgtcccaagaaagttgttgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C00HBa0030F21-A8fDs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C00HBa0030F21.1" temp_strand="+" temp_description="C00HBa0030F21.1  AC232688.1 htgs_phase:1 submitted_to_sgn_as:gi|206597340|gb|AC232688.1| upload_account_name:france Solanum lycopersicum chromosome 0 clone C00HBa0030F21, *** SEQUENCING IN PROGRESS ***, 17 unordered pieces">
        <position start="107368" stop="108622"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107668" g_stop="108322" g_length="655"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="655" r_length="655" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C00HBa0030F21.1" gen_strand="+" ref_id="SGN-E356905" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>655</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C00HBa0030F21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356905" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107668" e_stop="108322"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTGGAGTGTCTAGTAACAACCTCAATATTCCTTAGACCGTTACAATGGATGAATGATAATTTGGGATAAGTATTCTTCCATGAGTAGAAGTCGAGTACTTAGTAGTGATACCTTAACCTATAGTTAATTGGTGTAATGAAAGTCTAATACCCCGTGAGAATTGATACTTAGCACCGAAAGGATATGAATTGGGGTGGATATTCTTCGCGAGTAGAGGTGTCGTGTCTAGTATCGACCTCTTGAGATGGGTACTCTCTGTGAGTAGAGGTGTAGTATTTAGAAGCCATCTCCCTATTCCTTAACTATATGCCCATATAGCATTAGCTAGTGGTTCGCCACGTAAAGTCTAAAAGAATAACCCTATCTTAAGCAAGAGGGGATCCCTCATCCAGTAGGGGTTAATATCGGGAGTCCATGTCAAGCTCTCATAGTAAATGTCTATTAAATCTTACCCATAAAATAAAGTAATGAACTAGGTCTTCCTAAGGGTGAGCTACTTTTGGTAGGTGTTGGAATGGGACTGATGCTTCAATATGCGTATCTTTTATATTTCGTGATCAATTACTCTAACCCAAAATTTGAGTGTCTACGAATCGAAGTTAGTAAAGTAACCAAACAAACGGTTGGGGTCATGTCCCAAGAAAGTTGTTGTA</genome_strand>
        <mrna_strand>AGGTGGAGTGTCTAGTAACAACCTCAATATTCCTTAGACCGTTACAATGGATGATTGATAATTTGGGATAAGTATTCTTCCATGAGTAGAAGTCGAGTACTTAGTAGTGATACCTTAACCTATAGTTAATTGGTGTAATGAAAGTCTAATACCCCGTGAGAATTGATACTTAGCACCGAAAGGATATGAATTGGGGTGGATATTCTTCGCGAGTAGAGGTGTCGTGTCTAGTATCGACCTCTTGAGATGGGTACTCTCTGTGAGTAGAGGTGTAGTATTTAGAAGCCATCTCCCTATTCCTTAACTATATGCCCATATAGCATTAGCTAGTGGTTCGCCACGTAAAGTCTAAAAGAATAACCCTATCTTAAGCAAGAGGGGATCCCTCATCCAGTAGGGGTTAATATCGGGAGTCCATGTCAAGCTCTCATAGTAAATGTCTATTAAATCTTACCCATAAAATAAAGTAATGAACTAGGTCTTCCTAAGGGTGAGCTACTTTTGGTAGGTGTTGGAATGGGACTGATGCTTCAATATGCGTATCTTTTATATTTCGTGATCAATTACTCTAACCCAAAATTTGAGTGTCTACGAATCGAAGTTAGTAAAGTAACCAAACAAACGGTTGGGGTCATGTCCCAAGAAAGTTGTTGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>2</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="107666" PGL_stop="108394"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="107666" e_stop="108394"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="107666" e_stop="108394" e_length="729"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107666" stop="108394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356265" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107668" stop="108322"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356905" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAGGTGGAGTGTCTAGTAACAACCTCAATATTCCTTAGACCGTTACAATGGATGAATGATAATTTGGGATAAGTATTCTTCCATGAGTAGAAGTCGAGTACTTAGTAGTGATACCTTAACCTATAGTTAATTGGTGTAATGAAAGTCTAATACCCCGTGAGAATTGATACTTAGCACCGAAAGGATATGAATTGGGGTGGATATTCTTCGCGAGTAGAGGTGTCGTGTCTAGTATCGACCTCTTGAGATGGGTACTCTCTGTGAGTAGAGGTGTAGTATTTAGAAGCCATCTCCCTATTCCTTAACTATATGCCCATATAGCATTAGCTAGTGGTTCGCCACGTAAAGTCTAAAAGAATAACCCTATCTTAAGCAAGAGGGGATCCCTCATCCAGTAGGGGTTAATATCGGGAGTCCATGTCAAGCTCTCATAGTAAATGTCTATTAAATCTTACCCATAAAATAAAGTAATGAACTAGGTCTTCCTAAGGGTGAGCTACTTTTGGTAGGTGTTGGAATGGGACTGATGCTTCAATATGCGTATCTTTTATATTTCGTGATCAATTACTCTAACCCAAAATTTGAGTGTCTACGAATCGAAGTTAGTAAAGTAACCAAACAAACGGTTGGGGTCATGTCCCAAGAAAGTTGTTGTACAAGTAATAGCTACTTAGAATTTCATTATACATAGTGATAGCTCAAGACATTTTTGAGAATTAAAACAAAAT</gDNA_template>
            <first_frame> K  G  G  V  S  S  N  N  L  N  I  P  *  T  V  T  M  D  E  *  *  F  G  I  S  I  L  P  *  V  E  V  E  Y  L  V  V  I  P  *  P  I  V  N  W  C  N  E  S  L  I  P  R  E  N  *  Y  L  A  P  K  G  Y  E  L  G  W  I  F  F  A  S  R  G  V  V  S  S  I  D  L  L  R  W  V  L  S  V  S  R  G  V  V  F  R  S  H  L  P  I  P  *  L  Y  A  H  I  A  L  A  S  G  S  P  R  K  V  *  K  N  N  P  I  L  S  K  R  G  S  L  I  Q  *  G  L  I  S  G  V  H  V  K  L  S  *  *  M  S  I  K  S  Y  P  *  N  K  V  M  N  *  V  F  L  R  V  S  Y  F  W  *  V  L  E  W  D  *  C  F  N  M  R  I  F  Y  I  S  *  S  I  T  L  T  Q  N  L  S  V  Y  E  S  K  L  V  K  *  P  N  K  R  L  G  S  C  P  K  K  V  V  V  Q  V  I  A  T  *  N  F  I  I  H  S  D  S  S  R  H  F  *  E  L  K  Q  N </first_frame>
            <second_frame>  K  V  E  C  L  V  T  T  S  I  F  L  R  P  L  Q  W  M  N  D  N  L  G  *  V  F  F  H  E  *  K  S  S  T  *  *  *  Y  L  N  L  *  L  I  G  V  M  K  V  *  Y  P  V  R  I  D  T  *  H  R  K  D  M  N  W  G  G  Y  S  S  R  V  E  V  S  C  L  V  S  T  S  *  D  G  Y  S  L  *  V  E  V  *  Y  L  E  A  I  S  L  F  L  N  Y  M  P  I  *  H  *  L  V  V  R  H  V  K  S  K  R  I  T  L  S  *  A  R  G  D  P  S  S  S  R  G  *  Y  R  E  S  M  S  S  S  H  S  K  C  L  L  N  L  T  H  K  I  K  *  *  T  R  S  S  *  G  *  A  T  F  G  R  C  W  N  G  T  D  A  S  I  C  V  S  F  I  F  R  D  Q  L  L  *  P  K  I  *  V  S  T  N  R  S  *  *  S  N  Q  T  N  G  W  G  H  V  P  R  K  L  L  Y  K  *  *  L  L  R  I  S  L  Y  I  V  I  A  Q  D  I  F  E  N  *  N  K   </second_frame>
            <third_frame>   R  W  S  V  *  *  Q  P  Q  Y  S  L  D  R  Y  N  G  *  M  I  I  W  D  K  Y  S  S  M  S  R  S  R  V  L  S  S  D  T  L  T  Y  S  *  L  V  *  *  K  S  N  T  P  *  E  L  I  L  S  T  E  R  I  *  I  G  V  D  I  L  R  E  *  R  C  R  V  *  Y  R  P  L  E  M  G  T  L  C  E  *  R  C  S  I  *  K  P  S  P  Y  S  L  T  I  C  P  Y  S  I  S  *  W  F  A  T  *  S  L  K  E  *  P  Y  L  K  Q  E  G  I  P  H  P  V  G  V  N  I  G  S  P  C  Q  A  L  I  V  N  V  Y  *  I  L  P  I  K  *  S  N  E  L  G  L  P  K  G  E  L  L  L  V  G  V  G  M  G  L  M  L  Q  Y  A  Y  L  L  Y  F  V  I  N  Y  S  N  P  K  F  E  C  L  R  I  E  V  S  K  V  T  K  Q  T  V  G  V  M  S  Q  E  S  C  C  T  S  N  S  Y  L  E  F  H  Y  T  *  *  *  L  K  T  F  L  R  I  K  T  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C00HBa0030F21.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108133" stop="108357"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SNELGLPKGELLLVGVGMGLMLQYAYLLYFVINYSNPKFECLRIEVSKVTKQTVGVMSQESCCTSNSYLEFHYT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 17 chains have been computed
$ 
$ memory statistics:
$ 4080 bytes spliced alignments in total
$ 2 spliced alignments have been stored
$ 2040 bytes was the average size of a spliced alignment
$ 5528 bytes predicted gene locations in total
$ 1 predicted gene locations have been stored
$ 5528 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 20 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 06:54:53
-->
