SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 38156 15.0 2.9 2.1 C01HBa0017L24.2 6 6986 (132243) C Gypsy00093 Gypsy (1610) 7037 1 1 30780 13.3 3.4 2.9 C01HBa0017L24.2 2770 8281 (130948) + Gypsy00074 Gypsy 8442 13981 (110) 2 * 24964 9.0 0.6 1.6 C01HBa0017L24.2 8259 12166 (127063) + Gypsy00057 Gypsy 3 6106 (2) 3 * 9755 8.0 0.3 1.3 C01HBa0017L24.2 12181 13679 (125550) C Gypsy00183 Gypsy (1) 6821 4 4 1859 13.4 0.0 0.0 C01HBa0017L24.2 13676 13965 (125264) + Gypsy00154 Gypsy 1141 1430 (7920) 5 * 1269 11.1 1.0 1.0 C01HBa0017L24.2 15602 15801 (123428) C Gypsy00011 Gypsy (2897) 5115 4916 6 * 14568 16.6 2.4 1.0 C01HBa0017L24.2 15799 18607 (120622) + Gypsy00125 Gypsy 7231 10080 (0) 7 * 22163 22.5 5.1 4.6 C01HBa0017L24.2 16177 25382 (113847) C Gypsy00057 Gypsy (2) 9198 1259 8 23583 14.7 1.0 1.1 C01HBa0017L24.2 18826 22954 (116275) + Gypsy00012 Gypsy 1717 5842 (3004) 9 14592 10.4 1.2 0.8 C01HBa0017L24.2 25483 27768 (111461) + Gypsy00183 Gypsy 4528 6822 (0) 10 9675 10.8 1.1 1.5 C01HBa0017L24.2 26356 27942 (111287) + GYPSOL2_LTR Unknown 1 1580 (0) 11 * 237 31.7 4.3 0.6 C01HBa0017L24.2 27958 28119 (111110) C OSMUD1 Unknown (2962) 2066 1899 12 7182 16.9 2.8 4.2 C01HBa0017L24.2 33403 34981 (104248) + Copia00105 Copia 3 1558 (7299) 13 3057 17.7 2.3 4.6 C01HBa0017L24.2 35098 35794 (103435) + Copia00105 Copia 1546 2226 (6631) 13 9429 17.9 2.3 1.7 C01HBa0017L24.2 35800 37772 (101457) + Copia00105 Copia 2106 8571 (286) 13 426 21.4 1.6 5.7 C01HBa0017L24.2 41174 41297 (97932) + Copia00106 Copia 3446 3564 (892) 14 551 24.7 1.6 0.6 C01HBa0017L24.2 51685 51867 (87362) C ALIEN1_CA Unknown (85) 186 2 15 12984 5.9 7.2 0.9 C01HBa0017L24.2 52922 54703 (84526) C Gypsy00073 Gypsy (7295) 4789 2896 16 487 34.1 4.9 4.3 C01HBa0017L24.2 55733 56159 (83070) C Copia00144 Copia (1110) 5114 4173 17 608 31.9 3.2 2.7 C01HBa0017L24.2 55823 55867 (83362) + Copia00010 Copia 415 754 (3444) 18 656 30.9 3.4 2.7 C01HBa0017L24.2 55868 56160 (83069) C TNT1_I Unknown (458) 3656 3362 19 534 32.7 4.0 1.9 C01HBa0017L24.2 56531 56954 (82275) C SC-1 Unknown (1853) 5034 4602 20 487 34.1 4.9 4.3 C01HBa0017L24.2 56532 56954 (82275) C Copia00144 Copia (2052) 4172 3239 17 * 252 31.7 4.1 3.5 C01HBa0017L24.2 57484 57563 (81666) C Copia00046 Copia (3139) 2040 1889 21 298 26.8 0.0 0.0 C01HBa0017L24.2 57564 57645 (81584) C SHACOP8_I_MT Unknown (2095) 2044 1963 22 285 22.7 1.8 2.6 C01HBa0017L24.2 57567 57679 (81550) + Copia00186 Copia 2407 2518 (2189) 23 324 24.3 3.3 2.6 C01HBa0017L24.2 57684 57835 (81394) + Copia00033 Copia 3172 3324 (1113) 24 307 23.8 8.3 2.8 C01HBa0017L24.2 57787 57894 (81335) C Copia00003 Copia (3149) 1665 1552 25 * 670 23.5 3.7 0.8 C01HBa0017L24.2 60495 60739 (78490) + HATSOD1 Unknown 1 252 (4540) 26 360 4.2 0.0 0.0 C01HBa0017L24.2 60719 60789 (78440) + Gypsy00046 Gypsy 4080 4150 (6921) 27 * 329 6.0 4.8 0.0 C01HBa0017L24.2 60723 60805 (78424) + GYCUME1_LTR Unknown 373 459 (2187) 28 * 3128 18.1 2.6 1.1 C01HBa0017L24.2 61347 62003 (77226) C GYPSOL2_LTR Unknown (0) 1580 914 29 5044 4.8 7.5 4.3 C01HBa0017L24.2 62004 62751 (76478) + Gypsy00178 Gypsy 2724 3495 (5596) 30 * 16487 24.4 4.4 4.3 C01HBa0017L24.2 62750 68324 (70905) + Gypsy00056 Gypsy 347 5924 (6226) 31 5688 24.4 3.5 3.9 C01HBa0017L24.2 67272 69058 (70171) C Gypsy00118 Gypsy (3418) 2989 1210 32 * 278 28.8 2.7 0.0 C01HBa0017L24.2 69665 69775 (69454) C Gypsy00177 Gypsy (54) 10251 10138 33 * 2149 16.9 2.0 3.1 C01HBa0017L24.2 69732 70823 (68406) C Unknown00002 Unknown (3000) 6981 5737 34 * 10097 23.0 2.4 3.9 C01HBa0017L24.2 70822 73820 (65409) + Unknown00025 Unknown 2309 5262 (1046) 35 * 17048 18.9 2.9 2.0 C01HBa0017L24.2 72280 75990 (63239) C Gypsy00046 Gypsy (0) 11071 7329 36 374 28.4 8.2 4.5 C01HBa0017L24.2 75995 76285 (62944) + Gypsy00033 Gypsy 5072 5373 (5622) 37 * 466 28.2 4.9 4.9 C01HBa0017L24.2 76089 76312 (62917) C Unknown00002 Unknown (6681) 3300 3077 38 417 27.1 1.1 2.9 C01HBa0017L24.2 76166 76340 (62889) C Gypsy00177 Gypsy (9594) 711 540 39 * 303 21.7 7.9 11.8 C01HBa0017L24.2 76613 76978 (62251) C Unknown00052 Unknown (4405) 2737 36 40 * 2995 24.4 5.4 5.7 C01HBa0017L24.2 76750 78160 (61069) + Gypsy00033 Gypsy 5872 7277 (3718) 37 * 3272 25.0 5.0 6.6 C01HBa0017L24.2 77594 79264 (59965) + Unknown00045 Unknown 403 2046 (2478) 41 18540 23.6 2.9 2.2 C01HBa0017L24.2 79268 84304 (54925) C Gypsy00027 Gypsy (2442) 5490 422 42 669 23.0 4.7 2.2 C01HBa0017L24.2 84312 84624 (54605) C Unknown00002 Unknown (1775) 8206 2785 43 446 19.2 1.0 2.9 C01HBa0017L24.2 84592 84693 (54536) C Unknown00002 Unknown (1905) 8076 7977 43 * 230 18.0 2.0 2.0 C01HBa0017L24.2 84731 84781 (54448) C Unknown00002 Unknown (2087) 7894 7844 43 262 26.0 3.2 7.4 C01HBa0017L24.2 84803 85018 (54211) + Gypsy00115 Gypsy 6129 6335 (1648) 44 * 5601 20.5 5.0 2.4 C01HBa0017L24.2 84837 86297 (52932) + Unknown00002 Unknown 4391 6045 (3936) 45 321 26.2 4.2 3.2 C01HBa0017L24.2 86298 86486 (52743) + Gypsy00026 Gypsy 6455 6645 (98) 46 5601 20.5 5.0 2.4 C01HBa0017L24.2 86487 87313 (51916) + Unknown00002 Unknown 6046 6982 (2999) 45 926 23.1 4.1 2.7 C01HBa0017L24.2 88419 88783 (50446) + Unknown00002 Unknown 7040 7409 (2572) 45 624 21.5 7.9 1.5 C01HBa0017L24.2 89126 89432 (49797) + Unknown00056 Unknown 2779 8209 (1772) 47 * 2545 22.4 4.6 3.4 C01HBa0017L24.2 89424 90184 (49045) C Unknown00002 Unknown (2172) 7809 7040 48 602 20.3 0.7 1.3 C01HBa0017L24.2 90254 90403 (48826) C Unknown00002 Unknown (2852) 7129 6981 49 9416 17.2 5.7 4.9 C01HBa0017L24.2 91144 93485 (45744) C Unknown00002 Unknown (3238) 6743 4383 49 4633 24.6 3.7 4.1 C01HBa0017L24.2 93481 95210 (44019) + Gypsy00177 Gypsy 6681 8403 (1902) 50 * 6101 18.7 3.9 1.5 C01HBa0017L24.2 93812 95214 (44015) C Gypsy00080 Gypsy (7225) 2721 1286 51 4505 19.2 6.2 3.5 C01HBa0017L24.2 95207 96534 (42695) C Unknown00002 Unknown (4235) 5746 4383 49 * 1430 24.8 2.1 2.1 C01HBa0017L24.2 96542 96965 (42264) + Unknown00002 Unknown 7201 7624 (2357) 52 232 10.5 0.0 0.0 C01HBa0017L24.2 97197 97234 (41995) C Gypsy00038 Gypsy (2437) 5281 5244 53 832 22.5 5.5 1.9 C01HBa0017L24.2 97249 97559 (41670) + Unknown00002 Unknown 796 8204 (1777) 54 250 14.3 5.1 10.3 C01HBa0017L24.2 97499 97576 (41653) + Gypsy00121 Gypsy 1501 1574 (6752) 55 * 2854 23.5 8.1 7.6 C01HBa0017L24.2 100015 102715 (36514) + Unknown00002 Unknown 1500 9542 (439) 56 1510 25.9 3.3 3.4 C01HBa0017L24.2 103087 103726 (35503) + Unknown00002 Unknown 6986 7624 (2357) 57 838 26.1 8.3 2.3 C01HBa0017L24.2 104025 104373 (34856) + Unknown00002 Unknown 7844 8213 (1768) 57 511 29.4 2.4 5.4 C01HBa0017L24.2 104979 105273 (33956) + Unknown00052 Unknown 436 721 (3948) 58 259 26.6 8.9 8.3 C01HBa0017L24.2 106907 107074 (32155) + Gypsy00202 Gypsy 732 900 (13535) 59 315 18.2 11.4 7.6 C01HBa0017L24.2 106941 107071 (32158) C Gypsy00142 Gypsy (7104) 961 826 60 10219 15.1 1.2 2.1 C01HBa0017L24.2 107081 109014 (30215) C Unknown00045 Unknown (2480) 2044 127 61 * 13112 16.9 3.1 2.0 C01HBa0017L24.2 107630 110339 (28890) C Gypsy00033 Gypsy (3182) 7813 5074 62 230 14.6 5.4 1.8 C01HBa0017L24.2 110299 110354 (28875) + Unknown00052 Unknown 967 1024 (3645) 63 * 371 10.4 2.1 0.3 C01HBa0017L24.2 111159 111345 (27884) C TREP60 Unknown (0) 3319 38 64 343 19.5 3.5 2.2 C01HBa0017L24.2 111789 111914 (27315) C Gypsy00018 Gypsy (1332) 6617 4682 65 371 17.4 3.4 2.3 C01HBa0017L24.2 111810 111897 (27332) + Gypsy00046 Gypsy 1264 1352 (9719) 66 2302 29.9 3.0 2.1 C01HBa0017L24.2 112224 113308 (25921) + Gypsy00197 Gypsy 3478 4572 (4369) 67 440 28.4 1.7 2.2 C01HBa0017L24.2 113295 113474 (25755) + Gypsy00197 Gypsy 4756 4934 (4007) 67 * 4146 21.8 5.7 6.4 C01HBa0017L24.2 113502 115088 (24141) + GYPSOL2_LTR Unknown 4 1580 (0) 68 * 30658 19.6 4.0 3.4 C01HBa0017L24.2 115051 121973 (17256) C Gypsy00056 Gypsy (7) 12143 5175 69 18320 21.0 2.0 1.9 C01HBa0017L24.2 121973 126157 (13072) C Gypsy00056 Gypsy (7960) 4190 3 69 * 5553 25.0 2.5 4.1 C01HBa0017L24.2 124258 126403 (12826) + Gypsy00139 Gypsy 4988 7099 (2992) 70 * 2622 30.3 0.8 2.3 C01HBa0017L24.2 126412 127500 (11729) C Gypsy00142 Gypsy (2521) 5544 4472 71 2530 23.2 9.2 9.6 C01HBa0017L24.2 127591 129852 (9377) + Unknown00002 Unknown 4377 6718 (3263) 72 325 15.2 3.4 0.0 C01HBa0017L24.2 129886 129944 (9285) + Unknown00002 Unknown 6821 6881 (3100) 72 266 22.5 3.8 0.0 C01HBa0017L24.2 130362 130441 (8788) + Unknown00002 Unknown 1367 1449 (8532) 73 820 28.4 2.8 2.4 C01HBa0017L24.2 130451 130872 (8357) + Unknown00002 Unknown 7002 7425 (2556) 74 693 23.7 3.7 5.7 C01HBa0017L24.2 130880 131125 (8104) C Unknown00016 Unknown (2588) 2393 2153 75 967 26.8 4.8 4.1 C01HBa0017L24.2 133156 133856 (5373) + Unknown00002 Unknown 663 3410 (2204) 76 270 25.5 4.6 6.9 C01HBa0017L24.2 133739 133911 (5318) + Gypsy00117 Gypsy 182 350 (5310) 77 * 344 33.7 6.2 3.1 C01HBa0017L24.2 134123 134447 (4782) C Gypsy00042 Gypsy (5685) 1813 1479 78 266 23.4 1.3 2.5 C01HBa0017L24.2 135445 135523 (3706) + Unknown00002 Unknown 7553 7630 (2351) 79 736 29.6 2.4 2.4 C01HBa0017L24.2 135635 135970 (3259) + Unknown00002 Unknown 3062 3397 (6584) 80 425 17.4 3.2 1.1 C01HBa0017L24.2 135981 136073 (3156) + Gypsy00177 Gypsy 160 254 (10051) 81 * 1218 29.1 6.2 3.5 C01HBa0017L24.2 135996 136708 (2521) + Unknown00002 Unknown 7438 8169 (1812) 82 10323 21.8 2.0 0.9 C01HBa0017L24.2 136812 139228 (1) + Gypsy00172 Gypsy 636 2955 (2958) 83