##gff-version 3
##sequence-region C04HBa0239P14.1 1 19701
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match	1536	2352	0.989	+	0	ID=SGN-E326799_alignment_1;Target=SGN-E326799 1 737 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	1536	1950	0.993	+	0	ID=GTH_SGN_E_tom_potato_match_part_1;Target=SGN-E326799 1 415 +;Parent=SGN-E326799_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	2031	2352	0.984	+	0	ID=GTH_SGN_E_tom_potato_match_part_2;Target=SGN-E326799 416 737 +;Parent=SGN-E326799_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match	1558	2329	0.997	+	0	ID=SGN-E258370_alignment_1;Target=SGN-E258370 1 692 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	1558	1950	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_3;Target=SGN-E258370 1 393 +;Parent=SGN-E258370_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	2031	2329	0.993	+	0	ID=GTH_SGN_E_tom_potato_match_part_4;Target=SGN-E258370 394 692 +;Parent=SGN-E258370_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match	1558	2326	0.983	+	0	ID=SGN-E262128_alignment_1;Target=SGN-E262128 1 684 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	1558	1950	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_5;Target=SGN-E262128 1 393 +;Parent=SGN-E262128_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	2031	2326	0.959	+	0	ID=GTH_SGN_E_tom_potato_match_part_6;Target=SGN-E262128 394 684 +;Parent=SGN-E262128_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match	1611	2465	0.961	+	0	ID=SGN-E402577_alignment_1;Target=SGN-E402577 1 775 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	1611	1950	0.971	+	0	ID=GTH_SGN_E_tom_potato_match_part_7;Target=SGN-E402577 1 340 +;Parent=SGN-E402577_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	2031	2465	0.954	+	0	ID=GTH_SGN_E_tom_potato_match_part_8;Target=SGN-E402577 341 775 +;Parent=SGN-E402577_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match	1611	2327	0.964	+	0	ID=SGN-E432951_alignment_1;Target=SGN-E432951 1 637 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	1611	1950	0.968	+	0	ID=GTH_SGN_E_tom_potato_match_part_9;Target=SGN-E432951 1 340 +;Parent=SGN-E432951_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	2031	2327	0.960	+	0	ID=GTH_SGN_E_tom_potato_match_part_10;Target=SGN-E432951 341 637 +;Parent=SGN-E432951_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match	1667	2485	0.961	+	0	ID=SGN-E455434_alignment_1;Target=SGN-E455434 1 739 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	1667	1950	0.968	+	0	ID=GTH_SGN_E_tom_potato_match_part_11;Target=SGN-E455434 1 284 +;Parent=SGN-E455434_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	2031	2485	0.956	+	0	ID=GTH_SGN_E_tom_potato_match_part_12;Target=SGN-E455434 285 739 +;Parent=SGN-E455434_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match	1943	2710	0.994	+	0	ID=SGN-E328236_alignment_1;Target=SGN-E328236 1 686 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	1943	1950	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_13;Target=SGN-E328236 1 8 +;Parent=SGN-E328236_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	2031	2710	0.994	+	0	ID=GTH_SGN_E_tom_potato_match_part_14;Target=SGN-E328236 9 686 +;Parent=SGN-E328236_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match	2033	2550	0.998	+	0	ID=SGN-E207633_alignment_1;Target=SGN-E207633 1 518 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	2033	2550	0.998	+	0	ID=GTH_SGN_E_tom_potato_match_part_15;Target=SGN-E207633 1 518 +;Parent=SGN-E207633_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match	2056	2590	1.000	+	0	ID=SGN-E260325_alignment_1;Target=SGN-E260325 1 535 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	2056	2590	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_16;Target=SGN-E260325 1 535 +;Parent=SGN-E260325_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match	2059	2292	1.000	+	0	ID=SGN-E261153_alignment_1;Target=SGN-E261153 1 234 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	2059	2292	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_17;Target=SGN-E261153 1 234 +;Parent=SGN-E261153_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match	2071	2682	0.946	+	0	ID=SGN-E486697_alignment_1;Target=SGN-E486697 1 612 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	2071	2682	0.946	+	0	ID=GTH_SGN_E_tom_potato_match_part_18;Target=SGN-E486697 1 612 +;Parent=SGN-E486697_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match	2407	2727	0.994	+	0	ID=SGN-E365268_alignment_1;Target=SGN-E365268 1 321 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	2407	2727	0.994	+	0	ID=GTH_SGN_E_tom_potato_match_part_19;Target=SGN-E365268 1 321 +;Parent=SGN-E365268_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match	2409	2826	0.988	+	0	ID=SGN-E365269_alignment_1;Target=SGN-E365269 1 418 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	2409	2826	0.988	+	0	ID=GTH_SGN_E_tom_potato_match_part_20;Target=SGN-E365269 1 418 +;Parent=SGN-E365269_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match	2446	4296	1.000	+	0	ID=SGN-E318548_alignment_1;Target=SGN-E318548 1 534 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	2446	2829	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_21;Target=SGN-E318548 1 384 +;Parent=SGN-E318548_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	4147	4296	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_22;Target=SGN-E318548 385 534 +;Parent=SGN-E318548_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match	2459	4521	1.000	+	0	ID=SGN-E372223_alignment_1;Target=SGN-E372223 1 746 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	2459	2829	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_23;Target=SGN-E372223 1 371 +;Parent=SGN-E372223_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	4147	4521	1.000	+	0	ID=GTH_SGN_E_tom_potato_match_part_24;Target=SGN-E372223 372 746 +;Parent=SGN-E372223_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match	2564	4508	0.992	+	0	ID=SGN-E299242_alignment_1;Target=SGN-E299242 1 628 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	2564	2829	0.996	+	0	ID=GTH_SGN_E_tom_potato_match_part_25;Target=SGN-E299242 1 266 +;Parent=SGN-E299242_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	4147	4508	0.989	+	0	ID=GTH_SGN_E_tom_potato_match_part_26;Target=SGN-E299242 267 628 +;Parent=SGN-E299242_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match	2613	4515	0.928	+	0	ID=SGN-E577055_alignment_1;Target=SGN-E577055 1 597 -
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	2613	2829	0.848	+	0	ID=GTH_SGN_E_tom_potato_match_part_27;Target=SGN-E577055 1 229 -;Parent=SGN-E577055_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	4147	4515	0.976	+	0	ID=GTH_SGN_E_tom_potato_match_part_28;Target=SGN-E577055 230 597 -;Parent=SGN-E577055_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match	14842	15316	0.926	-	0	ID=SGN-E246710_alignment_1;Target=SGN-E246710 1 481 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	14842	15316	0.926	-	0	ID=GTH_SGN_E_tom_potato_match_part_29;Target=SGN-E246710 1 481 +;Parent=SGN-E246710_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match	15080	15317	0.945	-	0	ID=SGN-E391780_alignment_1;Target=SGN-E391780 1 239 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	15080	15317	0.945	-	0	ID=GTH_SGN_E_tom_potato_match_part_30;Target=SGN-E391780 1 239 +;Parent=SGN-E391780_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match	15444	15847	0.911	-	0	ID=SGN-E357559_alignment_1;Target=SGN-E357559 1 402 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	match_part	15444	15847	0.911	-	0	ID=GTH_SGN_E_tom_potato_match_part_31;Target=SGN-E357559 1 402 +;Parent=SGN-E357559_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	gene	1536	4521	.	+	0	ID=GTH_SGN_E_tom_potato_gene_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	mRNA	1536	4521	.	+	0	ID=GTH_SGN_E_tom_potato_gene_1_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	exon	1536	1950	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_1;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	exon	2031	2829	0.994	+	0	ID=GTH_SGN_E_tom_potato_exon_2;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	exon	4147	4521	1.000	+	0	ID=GTH_SGN_E_tom_potato_exon_3;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	gene	14842	15317	.	-	0	ID=GTH_SGN_E_tom_potato_gene_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	mRNA	14842	15317	.	-	0	ID=GTH_SGN_E_tom_potato_gene_2_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	exon	14842	15317	0.926	-	0	ID=GTH_SGN_E_tom_potato_exon_4;Parent=GTH_SGN_E_tom_potato_gene_2_AGS_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	gene	15444	15847	.	-	0	ID=GTH_SGN_E_tom_potato_gene_3
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	mRNA	15444	15847	.	-	0	ID=GTH_SGN_E_tom_potato_gene_3_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_3
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato_potato	exon	15444	15847	0.911	-	0	ID=GTH_SGN_E_tom_potato_exon_5;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04HBa0239P14.1	RepeatMasker	nucleotide_motif	7195	7812	2444	+	0	ID=Gypsy00205_alignment_1;Target=Gypsy00205 6190 6788 +
C04HBa0239P14.1	RepeatMasker	nucleotide_motif	9616	9701	397	-	0	ID=Gypsy00046_alignment_1;Target=Gypsy00046 4098 4178 -
C04HBa0239P14.1	RepeatMasker	nucleotide_motif	9631	9710	401	+	0	ID=HELITRON7_OS_alignment_1;Target=HELITRON7_OS 1607 1685 +
C04HBa0239P14.1	RepeatMasker	nucleotide_motif	10058	10153	487	-	0	ID=Copia00110_alignment_1;Target=Copia00110 2732 2827 -
C04HBa0239P14.1	RepeatMasker	nucleotide_motif	10068	10196	579	+	0	ID=Unknown00040_alignment_1;Target=Unknown00040 4371 4503 +
C04HBa0239P14.1	RepeatMasker	nucleotide_motif	10144	10514	1108	-	0	ID=Unknown00020_alignment_1;Target=Unknown00020 1 373 -
C04HBa0239P14.1	RepeatMasker	nucleotide_motif	10392	10574	669	+	0	ID=TONT1_LE_LTR_alignment_1;Target=TONT1_LE_LTR 650 836 +
C04HBa0239P14.1	RepeatMasker	nucleotide_motif	11715	11959	1367	-	0	ID=SONATA2_alignment_1;Target=SONATA2 1 253 -
C04HBa0239P14.1	RepeatMasker	nucleotide_motif	12490	12659	293	+	0	ID=SINE_SO_alignment_1;Target=SINE_SO 9 188 +
C04HBa0239P14.1	RepeatMasker	nucleotide_motif	13293	13420	376	+	0	ID=Copia00005_alignment_1;Target=Copia00005 15 148 +
C04HBa0239P14.1	RepeatMasker	nucleotide_motif	13446	13782	1426	-	0	ID=Copia00198_alignment_1;Target=Copia00198 388 778 -
C04HBa0239P14.1	RepeatMasker	nucleotide_motif	13865	14556	1877	+	0	ID=Unknown00029_alignment_1;Target=Unknown00029 3372 4075 +
C04HBa0239P14.1	RepeatMasker	nucleotide_motif	14556	16433	10895	+	0	ID=Copia00042_alignment_1;Target=Copia00042 1 1776 +
C04HBa0239P14.1	RepeatMasker	nucleotide_motif	16410	18079	5188	+	0	ID=Unknown00029_alignment_2;Target=Unknown00029 4040 5684 +
C04HBa0239P14.1	RepeatMasker	nucleotide_motif	18091	18189	356	-	0	ID=Gypsy00077_alignment_1;Target=Gypsy00077 5249 5347 -
C04HBa0239P14.1	RepeatMasker	nucleotide_motif	18300	18445	609	-	0	ID=Gypsy00107_alignment_1;Target=Gypsy00107 10732 10876 -
C04HBa0239P14.1	RepeatMasker	nucleotide_motif	18683	19701	3131	-	0	ID=Unknown00029_alignment_3;Target=Unknown00029 3556 4569 -
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15646	1009	+	0	ID=C00HBa0075M11.1_rev_alignment_1;blast_gaps=24;Target=clone-C00HBa0075M11.1 144912 146009 -;blast_percent_identity=88.32;blast_mismatches=94;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15547	1364	+	0	ID=C00HBa0242B17.1_rev_alignment_1;blast_gaps=9;Target=clone-C00HBa0242B17.1 97641 98641 -;blast_percent_identity=92.84;blast_mismatches=56;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15547	1455	+	0	ID=C00HBa0305L18.1_fwd_alignment_1;blast_gaps=7;Target=clone-C00HBa0305L18.1 75390 76391 +;blast_percent_identity=93.82;blast_mismatches=49;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14550	15542	1352	+	0	ID=C01HBa0032H01.1_fwd_alignment_1;blast_gaps=8;Target=clone-C01HBa0032H01.1 14069 15072 +;blast_percent_identity=92.64;blast_mismatches=61;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14787	15871	1554	+	0	ID=C01HBa0130I12.1_fwd_alignment_1;blast_gaps=8;Target=clone-C01HBa0130I12.1 24593 25683 +;blast_percent_identity=93.68;blast_mismatches=61;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14554	15844	1602	+	0	ID=C01HBa0329A12.1_rev_alignment_1;blast_gaps=20;Target=clone-C01HBa0329A12.1 82025 83324 -;blast_percent_identity=91.83;blast_mismatches=80;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14575	15880	1859	+	0	ID=C02HBa0122C10.1_rev_alignment_1;blast_gaps=12;Target=clone-C02HBa0122C10.1 74887 76199 -;blast_percent_identity=93.56;blast_mismatches=66;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15542	1189	+	0	ID=C02HBa0185P07.1_rev_alignment_1;blast_gaps=17;Target=clone-C02HBa0185P07.1 55635 56628 -;blast_percent_identity=91.34;blast_mismatches=59;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15542	1243	+	0	ID=C02HBa0204D01.2_rev_alignment_1;blast_gaps=14;Target=clone-C02HBa0204D01.2 53175 54169 -;blast_percent_identity=91.73;blast_mismatches=58;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14575	15879	2087	+	0	ID=C02HBa0323C04.2_fwd_alignment_1;blast_gaps=8;Target=clone-C02HBa0323C04.2 93972 95285 +;blast_percent_identity=95.52;blast_mismatches=46;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15542	1189	+	0	ID=C02SLe0104N06.1_fwd_alignment_1;blast_gaps=17;Target=clone-C02SLe0104N06.1 63676 64669 +;blast_percent_identity=91.34;blast_mismatches=59;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15542	1148	+	0	ID=C04HBa0002B09.1_fwd_alignment_1;blast_gaps=15;Target=clone-C04HBa0002B09.1 60747 61740 +;blast_percent_identity=90.64;blast_mismatches=68;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15547	1197	+	0	ID=C04HBa0002B09.1_fwd_alignment_2;blast_gaps=15;Target=clone-C04HBa0002B09.1 53909 54907 +;blast_percent_identity=91.18;blast_mismatches=63;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	17702	19459	3384	+	0	ID=C04HBa0002G01.1_fwd_alignment_1;blast_gaps=0;Target=clone-C04HBa0002G01.1 1 1758 +;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	1	1431	2795	+	0	ID=C04HBa0029F16.1_fwd_alignment_1;blast_gaps=0;Target=clone-C04HBa0029F16.1 116289 117719 +;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15542	1191	+	0	ID=C04HBa0111L05.1_fwd_alignment_1;blast_gaps=11;Target=clone-C04HBa0111L05.1 51466 52466 +;blast_percent_identity=90.93;blast_mismatches=74;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14557	15542	1298	+	0	ID=C04HBa0111L05.1_fwd_alignment_2;blast_gaps=11;Target=clone-C04HBa0111L05.1 55100 56098 +;blast_percent_identity=92.31;blast_mismatches=60;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15540	1247	+	0	ID=C04HBa0114C15.1_rev_alignment_1;blast_gaps=16;Target=clone-C04HBa0114C15.1 96255 97245 -;blast_percent_identity=92.02;blast_mismatches=53;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15547	1269	+	0	ID=C04HBa0114C15.1_rev_alignment_2;blast_gaps=16;Target=clone-C04HBa0114C15.1 103417 104414 -;blast_percent_identity=92.17;blast_mismatches=52;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14711	15886	1403	+	0	ID=C04HBa0230N10.1_fwd_alignment_1;blast_gaps=16;Target=clone-C04HBa0230N10.1 31433 32616 +;blast_percent_identity=91.02;blast_mismatches=83;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14554	15542	1235	+	0	ID=C04HBa0304N09.1_fwd_alignment_1;blast_gaps=12;Target=clone-C04HBa0304N09.1 42558 43553 +;blast_percent_identity=91.43;blast_mismatches=63;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15542	1360	+	0	ID=C04SLm0096N24.1_rev_alignment_1;blast_gaps=13;Target=clone-C04SLm0096N24.1 32628 33621 -;blast_percent_identity=93.12;blast_mismatches=45;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15542	1140	+	0	ID=C04SLm0105F02.1_rev_alignment_1;blast_gaps=14;Target=clone-C04SLm0105F02.1 92240 93234 -;blast_percent_identity=90.44;blast_mismatches=71;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	15399	16432	1616	+	0	ID=C04SLm0143K21.1_fwd_alignment_1;blast_gaps=5;Target=clone-C04SLm0143K21.1 15792 16827 +;blast_percent_identity=95.09;blast_mismatches=45;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	16212	2611	+	0	ID=C04SLm0143K21.1_fwd_alignment_2;blast_gaps=11;Target=clone-C04SLm0143K21.1 21960 23624 +;blast_percent_identity=95.16;blast_mismatches=58;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14692	15886	1429	+	0	ID=C06HBa0040F08.1_fwd_alignment_1;blast_gaps=18;Target=clone-C06HBa0040F08.1 75169 76371 +;blast_percent_identity=91.25;blast_mismatches=82;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14711	15803	1372	+	0	ID=C06HBa0040F08.1_fwd_alignment_2;blast_gaps=15;Target=clone-C06HBa0040F08.1 33030 34133 +;blast_percent_identity=91.88;blast_mismatches=71;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15860	1883	+	0	ID=C06HBa0040F08.1_fwd_alignment_3;blast_gaps=13;Target=clone-C06HBa0040F08.1 95091 96401 +;blast_percent_identity=93.79;blast_mismatches=59;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14554	15595	1447	+	0	ID=C06HBa0119L20.1_rev_alignment_1;blast_gaps=10;Target=clone-C06HBa0119L20.1 106631 107679 -;blast_percent_identity=93.16;blast_mismatches=57;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14692	15866	1392	+	0	ID=C06HBa0153O03.2_rev_alignment_1;blast_gaps=15;Target=clone-C06HBa0153O03.2 58253 59432 -;blast_percent_identity=90.91;blast_mismatches=87;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14562	15595	1249	+	0	ID=C06HBa0208D24.1_fwd_alignment_1;blast_gaps=16;Target=clone-C06HBa0208D24.1 26214 27251 +;blast_percent_identity=91.24;blast_mismatches=64;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14557	15595	1275	+	0	ID=C07HBa0284C08.2_rev_alignment_1;blast_gaps=14;Target=clone-C07HBa0284C08.2 99516 100560 -;blast_percent_identity=91.28;blast_mismatches=66;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14552	15595	1308	+	0	ID=C07HBa0284C08.2_rev_alignment_2;blast_gaps=14;Target=clone-C07HBa0284C08.2 105354 106403 -;blast_percent_identity=91.60;blast_mismatches=63;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14554	15547	1409	+	0	ID=C07HBa0284C08.2_fwd_alignment_1;blast_gaps=10;Target=clone-C07HBa0284C08.2 65246 66248 +;blast_percent_identity=93.54;blast_mismatches=50;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15547	1447	+	0	ID=C07HBa0284C08.2_fwd_alignment_2;blast_gaps=10;Target=clone-C07HBa0284C08.2 72354 73355 +;blast_percent_identity=94.03;blast_mismatches=45;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14778	15854	1271	+	0	ID=C07SLe0007L14.1_fwd_alignment_1;blast_gaps=11;Target=clone-C07SLe0007L14.1 54927 56002 +;blast_percent_identity=90.77;blast_mismatches=87;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14552	15542	1324	+	0	ID=C07SLm0047K21.1_fwd_alignment_1;blast_gaps=13;Target=clone-C07SLm0047K21.1 82518 83521 +;blast_percent_identity=92.66;blast_mismatches=53;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15886	1802	+	0	ID=C07SLm0111C06.1_fwd_alignment_1;blast_gaps=17;Target=clone-C07SLm0111C06.1 102989 104332 +;blast_percent_identity=92.96;blast_mismatches=71;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15542	1231	+	0	ID=C07SLm0141H03.2_fwd_alignment_1;blast_gaps=13;Target=clone-C07SLm0141H03.2 41628 42624 +;blast_percent_identity=91.44;blast_mismatches=61;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15643	1671	+	0	ID=C08HBa0037O01.1_fwd_alignment_1;blast_gaps=10;Target=clone-C08HBa0037O01.1 15456 16555 +;blast_percent_identity=94.92;blast_mismatches=41;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14692	15844	1558	+	0	ID=C08HBa0086F08.1_rev_alignment_1;blast_gaps=12;Target=clone-C08HBa0086F08.1 51978 53144 -;blast_percent_identity=92.65;blast_mismatches=66;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15643	1671	+	0	ID=C08HBa0123M03.1_rev_alignment_1;blast_gaps=10;Target=clone-C08HBa0123M03.1 17015 18114 -;blast_percent_identity=94.92;blast_mismatches=41;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15542	1251	+	0	ID=C08HBa0139J15.1_fwd_alignment_1;blast_gaps=14;Target=clone-C08HBa0139J15.1 30756 31756 +;blast_percent_identity=91.85;blast_mismatches=59;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15542	1259	+	0	ID=C08HBa0139J15.1_fwd_alignment_2;blast_gaps=14;Target=clone-C08HBa0139J15.1 23561 24561 +;blast_percent_identity=91.95;blast_mismatches=58;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14711	15871	1352	+	0	ID=C08HBa0323O07.1_rev_alignment_1;blast_gaps=18;Target=clone-C08HBa0323O07.1 147641 148807 -;blast_percent_identity=90.90;blast_mismatches=83;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15879	2099	+	0	ID=C08SLe0002C23.1_fwd_alignment_1;blast_gaps=8;Target=clone-C08SLe0002C23.1 91639 92976 +;blast_percent_identity=95.29;blast_mismatches=50;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15547	1394	+	0	ID=C08SLe0005E20.1_fwd_alignment_1;blast_gaps=13;Target=clone-C08SLe0005E20.1 90192 91190 +;blast_percent_identity=93.45;blast_mismatches=42;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14554	15705	1711	+	0	ID=C08SLe0026N05.1_rev_alignment_1;blast_gaps=10;Target=clone-C08SLe0026N05.1 36043 37207 -;blast_percent_identity=94.25;blast_mismatches=52;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15879	1901	+	0	ID=C08SLe0028K16.1_fwd_alignment_1;blast_gaps=14;Target=clone-C08SLe0028K16.1 69309 70638 +;blast_percent_identity=93.73;blast_mismatches=59;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15879	1972	+	0	ID=C08SLe0028K16.1_fwd_alignment_2;blast_gaps=14;Target=clone-C08SLe0028K16.1 76341 77670 +;blast_percent_identity=94.40;blast_mismatches=50;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15866	1855	+	0	ID=C08SLe0050O01.1_fwd_alignment_1;blast_gaps=15;Target=clone-C08SLe0050O01.1 17205 18524 +;blast_percent_identity=93.53;blast_mismatches=60;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14711	15866	1342	+	0	ID=C08SLe0117L03.1_fwd_alignment_1;blast_gaps=19;Target=clone-C08SLe0117L03.1 53695 54855 +;blast_percent_identity=90.95;blast_mismatches=81;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14553	15646	1203	+	0	ID=C08SLm0019C20.1_fwd_alignment_1;blast_gaps=21;Target=clone-C08SLm0019C20.1 17766 18868 +;blast_percent_identity=90.22;blast_mismatches=76;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14711	15866	1342	+	0	ID=C08SLm0026K22.1_fwd_alignment_1;blast_gaps=19;Target=clone-C08SLm0026K22.1 13617 14777 +;blast_percent_identity=90.95;blast_mismatches=81;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15866	1409	+	0	ID=C08SLm0108O09.1_fwd_alignment_1;blast_gaps=21;Target=clone-C08SLm0108O09.1 119728 121041 +;blast_percent_identity=89.70;blast_mismatches=103;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15542	1122	+	0	ID=C08SLm0108O09.1_fwd_alignment_2;blast_gaps=16;Target=clone-C08SLm0108O09.1 113979 114969 +;blast_percent_identity=90.43;blast_mismatches=69;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	16430	2413	+	0	ID=C08SLm0108O09.1_fwd_alignment_3;blast_gaps=16;Target=clone-C08SLm0108O09.1 39275 41160 +;blast_percent_identity=91.81;blast_mismatches=131;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14557	15871	1911	+	0	ID=C08SLm0108O09.1_rev_alignment_1;blast_gaps=8;Target=clone-C08SLm0108O09.1 5978 7303 -;blast_percent_identity=93.67;blast_mismatches=71;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15879	1457	+	0	ID=C08SLm0114A09.1_rev_alignment_1;blast_gaps=21;Target=clone-C08SLm0114A09.1 50705 52032 -;blast_percent_identity=90.02;blast_mismatches=101;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14787	15879	1376	+	0	ID=C08SLm0114A09.1_rev_alignment_2;blast_gaps=13;Target=clone-C08SLm0114A09.1 57782 58873 -;blast_percent_identity=91.91;blast_mismatches=74;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15547	1433	+	0	ID=C09HBa0130D14.1_rev_alignment_1;blast_gaps=10;Target=clone-C09HBa0130D14.1 21516 22519 -;blast_percent_identity=93.84;blast_mismatches=47;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15877	2070	+	0	ID=C09HBa0278J12.2_fwd_alignment_1;blast_gaps=10;Target=clone-C09HBa0278J12.2 11274 12610 +;blast_percent_identity=95.14;blast_mismatches=49;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15547	1572	+	0	ID=C09SLe0066M20.2_fwd_alignment_1;blast_gaps=6;Target=clone-C09SLe0066M20.2 112163 113166 +;blast_percent_identity=95.22;blast_mismatches=37;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15547	1675	+	0	ID=C09SLe0066M20.2_fwd_alignment_2;blast_gaps=6;Target=clone-C09SLe0066M20.2 105016 106019 +;blast_percent_identity=96.51;blast_mismatches=24;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14559	15642	1176	+	0	ID=C11HBa0249E07.1_fwd_alignment_1;blast_gaps=20;Target=clone-C11HBa0249E07.1 101896 102990 +;blast_percent_identity=90.04;blast_mismatches=81;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15642	1197	+	0	ID=C11HBa0249E07.1_fwd_alignment_2;blast_gaps=21;Target=clone-C11HBa0249E07.1 109009 110107 +;blast_percent_identity=90.34;blast_mismatches=78;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14550	15884	1784	+	0	ID=C11HBa0249E07.1_rev_alignment_1;blast_gaps=18;Target=clone-C11HBa0249E07.1 46812 48153 -;blast_percent_identity=92.76;blast_mismatches=69;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15646	1043	+	0	ID=C11HBa0323C14.1_fwd_alignment_1;blast_gaps=23;Target=clone-C11HBa0323C14.1 57448 58549 +;blast_percent_identity=88.68;blast_mismatches=94;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15905	1740	+	0	ID=C12HBa0009J11.1_rev_alignment_1;blast_gaps=19;Target=clone-C12HBa0009J11.1 113407 114761 -;blast_percent_identity=92.18;blast_mismatches=75;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bacs	match	14555	15905	1740	+	0	ID=C12SLe0038P06.1_rev_alignment_1;blast_gaps=19;Target=clone-C12SLe0038P06.1 33488 34842 -;blast_percent_identity=92.18;blast_mismatches=75;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bac_ends	clone_end	916	1424	1009	-	0	ID=C04HBa0239P14.1-SL_MboI0004K14_SP6_145502_1;blast_gaps=0;Target=SL_MboI0004K14_SP6_145502 1 509 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bac_ends	clone_end	1493	1979	957	-	0	ID=C04HBa0239P14.1-LE_HBa0029F16_SP6_92046_1;blast_gaps=0;Target=LE_HBa0029F16_SP6_92046 1 487 +;is_problematic=0;blast_percent_identity=99.79;blast_mismatches=1;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bac_ends	clone_start	1996	2415	817	+	0	ID=C04HBa0239P14.1-LE_HBa0011E07_T7_5478_1;blast_gaps=0;Target=LE_HBa0011E07_T7_5478 1 420 +;is_problematic=0;blast_percent_identity=99.52;blast_mismatches=2;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bac_ends	clone_end	2452	3000	1088	-	0	ID=C04HBa0239P14.1-SL_MboI0005N20_SP6_225344_1;blast_gaps=0;Target=SL_MboI0005N20_SP6_225344 1 549 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bac_ends	clone_start	2452	2822	712	+	0	ID=C04HBa0239P14.1-LE_HBa0011E07_T7_5478_2;blast_gaps=0;Target=LE_HBa0011E07_T7_5478 457 827 +;is_problematic=0;blast_percent_identity=99.19;blast_mismatches=3;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bac_ends	clone_start	4300	5050	1489	+	0	ID=C04HBa0239P14.1-LE_HBa0066H10_T7_50659_1;blast_gaps=0;Target=LE_HBa0066H10_T7_50659 1 751 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bac_ends	clone_end	13136	13282	291	-	0	ID=C04HBa0239P14.1-SL_MboI0083G02_SP6_172550_1;blast_gaps=0;Target=SL_MboI0083G02_SP6_172550 529 675 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=7e-76
C04HBa0239P14.1	BLAST_tomato_bac_ends	clone_end	13327	13801	942	-	0	ID=C04HBa0239P14.1-SL_MboI0083G02_SP6_172550_2;blast_gaps=0;Target=SL_MboI0083G02_SP6_172550 10 484 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bac_ends	clone_start	13327	13729	783	-	0	ID=C04HBa0239P14.1-SL_EcoRI0029F10_T7_233942_1;blast_gaps=1;Target=SL_EcoRI0029F10_T7_233942 1 402 +;is_problematic=0;blast_percent_identity=99.75;blast_mismatches=0;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bac_ends	clone_start	13755	14366	1213	-	0	ID=C04HBa0239P14.1-SL_EcoRI0131C15_T7_334961_1;blast_gaps=0;Target=SL_EcoRI0131C15_T7_334961 1 612 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bac_ends	clone_end	14066	14665	1189	-	0	ID=C04HBa0239P14.1-SL_FOS0002I21_pIBR_415867_1;blast_gaps=0;Target=SL_FOS0002I21_pIBR_415867 3 602 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bac_ends	clone_end	14462	14979	1027	-	0	ID=C04HBa0239P14.1-SL_FOS0124J10_pIBR_481057_1;blast_gaps=0;Target=SL_FOS0124J10_pIBR_481057 3 520 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bac_ends	clone_end	15054	15491	868	+	0	ID=C04HBa0239P14.1-SL_FOS0278P05_pIBR_614097_1;blast_gaps=0;Target=SL_FOS0278P05_pIBR_614097 1 438 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0239P14.1	BLAST_tomato_bac_ends	clone_start	17703	18433	1435	+	0	ID=C04HBa0239P14.1-LE_HBa0002G01_T7_52897_1;blast_gaps=1;Target=LE_HBa0002G01_T7_52897 1 732 +;is_problematic=0;blast_percent_identity=99.86;blast_mismatches=0;blast_evalue=0.0
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match	1536	2352	0.989	+	0	ID=SGN-E326799_alignment_2;Target=SGN-E326799 1 737 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match_part	1536	1950	0.993	+	0	ID=GTH_SGN_E_tom_match_part_1;Target=SGN-E326799 1 415 +;Parent=SGN-E326799_alignment_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match_part	2031	2352	0.984	+	0	ID=GTH_SGN_E_tom_match_part_2;Target=SGN-E326799 416 737 +;Parent=SGN-E326799_alignment_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match	1558	2329	0.997	+	0	ID=SGN-E258370_alignment_2;Target=SGN-E258370 1 692 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match_part	1558	1950	1.000	+	0	ID=GTH_SGN_E_tom_match_part_3;Target=SGN-E258370 1 393 +;Parent=SGN-E258370_alignment_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match_part	2031	2329	0.993	+	0	ID=GTH_SGN_E_tom_match_part_4;Target=SGN-E258370 394 692 +;Parent=SGN-E258370_alignment_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match	1558	2326	0.983	+	0	ID=SGN-E262128_alignment_2;Target=SGN-E262128 1 684 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match_part	1558	1950	1.000	+	0	ID=GTH_SGN_E_tom_match_part_5;Target=SGN-E262128 1 393 +;Parent=SGN-E262128_alignment_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match_part	2031	2326	0.959	+	0	ID=GTH_SGN_E_tom_match_part_6;Target=SGN-E262128 394 684 +;Parent=SGN-E262128_alignment_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match	1943	2710	0.994	+	0	ID=SGN-E328236_alignment_2;Target=SGN-E328236 1 686 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match_part	1943	1950	1.000	+	0	ID=GTH_SGN_E_tom_match_part_7;Target=SGN-E328236 1 8 +;Parent=SGN-E328236_alignment_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match_part	2031	2710	0.994	+	0	ID=GTH_SGN_E_tom_match_part_8;Target=SGN-E328236 9 686 +;Parent=SGN-E328236_alignment_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match	2033	2550	0.998	+	0	ID=SGN-E207633_alignment_2;Target=SGN-E207633 1 518 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match_part	2033	2550	0.998	+	0	ID=GTH_SGN_E_tom_match_part_9;Target=SGN-E207633 1 518 +;Parent=SGN-E207633_alignment_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match	2056	2590	1.000	+	0	ID=SGN-E260325_alignment_2;Target=SGN-E260325 1 535 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match_part	2056	2590	1.000	+	0	ID=GTH_SGN_E_tom_match_part_10;Target=SGN-E260325 1 535 +;Parent=SGN-E260325_alignment_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match	2059	2292	1.000	+	0	ID=SGN-E261153_alignment_2;Target=SGN-E261153 1 234 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match_part	2059	2292	1.000	+	0	ID=GTH_SGN_E_tom_match_part_11;Target=SGN-E261153 1 234 +;Parent=SGN-E261153_alignment_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match	2407	2727	0.994	+	0	ID=SGN-E365268_alignment_2;Target=SGN-E365268 1 321 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match_part	2407	2727	0.994	+	0	ID=GTH_SGN_E_tom_match_part_12;Target=SGN-E365268 1 321 +;Parent=SGN-E365268_alignment_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match	2409	2826	0.988	+	0	ID=SGN-E365269_alignment_2;Target=SGN-E365269 1 418 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match_part	2409	2826	0.988	+	0	ID=GTH_SGN_E_tom_match_part_13;Target=SGN-E365269 1 418 +;Parent=SGN-E365269_alignment_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match	2446	4296	1.000	+	0	ID=SGN-E318548_alignment_2;Target=SGN-E318548 1 534 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match_part	2446	2829	1.000	+	0	ID=GTH_SGN_E_tom_match_part_14;Target=SGN-E318548 1 384 +;Parent=SGN-E318548_alignment_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match_part	4147	4296	1.000	+	0	ID=GTH_SGN_E_tom_match_part_15;Target=SGN-E318548 385 534 +;Parent=SGN-E318548_alignment_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match	2459	4521	1.000	+	0	ID=SGN-E372223_alignment_2;Target=SGN-E372223 1 746 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match_part	2459	2829	1.000	+	0	ID=GTH_SGN_E_tom_match_part_16;Target=SGN-E372223 1 371 +;Parent=SGN-E372223_alignment_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match_part	4147	4521	1.000	+	0	ID=GTH_SGN_E_tom_match_part_17;Target=SGN-E372223 372 746 +;Parent=SGN-E372223_alignment_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match	2564	4508	0.992	+	0	ID=SGN-E299242_alignment_2;Target=SGN-E299242 1 628 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match_part	2564	2829	0.996	+	0	ID=GTH_SGN_E_tom_match_part_18;Target=SGN-E299242 1 266 +;Parent=SGN-E299242_alignment_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match_part	4147	4508	0.989	+	0	ID=GTH_SGN_E_tom_match_part_19;Target=SGN-E299242 267 628 +;Parent=SGN-E299242_alignment_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match	14842	15316	0.926	-	0	ID=SGN-E246710_alignment_2;Target=SGN-E246710 1 481 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match_part	14842	15316	0.926	-	0	ID=GTH_SGN_E_tom_match_part_20;Target=SGN-E246710 1 481 +;Parent=SGN-E246710_alignment_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match	15080	15317	0.945	-	0	ID=SGN-E391780_alignment_2;Target=SGN-E391780 1 239 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match_part	15080	15317	0.945	-	0	ID=GTH_SGN_E_tom_match_part_21;Target=SGN-E391780 1 239 +;Parent=SGN-E391780_alignment_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match	15444	15847	0.911	-	0	ID=SGN-E357559_alignment_2;Target=SGN-E357559 1 402 +
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	match_part	15444	15847	0.911	-	0	ID=GTH_SGN_E_tom_match_part_22;Target=SGN-E357559 1 402 +;Parent=SGN-E357559_alignment_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	gene	1536	4521	.	+	0	ID=GTH_SGN_E_tom_gene_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	mRNA	1536	4521	.	+	0	ID=GTH_SGN_E_tom_gene_1_AGS_1;Parent=GTH_SGN_E_tom_gene_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	exon	1536	1950	1.000	+	0	ID=GTH_SGN_E_tom_exon_1;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	exon	2031	2829	0.994	+	0	ID=GTH_SGN_E_tom_exon_2;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	exon	4147	4521	1.000	+	0	ID=GTH_SGN_E_tom_exon_3;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	gene	14842	15317	.	-	0	ID=GTH_SGN_E_tom_gene_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	mRNA	14842	15317	.	-	0	ID=GTH_SGN_E_tom_gene_2_AGS_1;Parent=GTH_SGN_E_tom_gene_2
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	exon	14842	15317	0.926	-	0	ID=GTH_SGN_E_tom_exon_4;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	gene	15444	15847	.	-	0	ID=GTH_SGN_E_tom_gene_3
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	mRNA	15444	15847	.	-	0	ID=GTH_SGN_E_tom_gene_3_AGS_1;Parent=GTH_SGN_E_tom_gene_3
C04HBa0239P14.1	GenomeThreader_SGN_E_tomato	exon	15444	15847	0.911	-	0	ID=GTH_SGN_E_tom_exon_5;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C04HBa0239P14.1	AUGUSTUS_tom_cdna	gene	1201	4254	1	+	.	ID=g1_1
C04HBa0239P14.1	AUGUSTUS_tom_cdna	transcript	1201	4254	.	+	.	ID=g1.t1_1;Parent=g1_1
C04HBa0239P14.1	AUGUSTUS_tom_cdna	CDS	1201	1384	.	+	0	ID=g1.t1.cds_1;Parent=g1.t1_1
C04HBa0239P14.1	AUGUSTUS_tom_cdna	CDS	1512	1950	.	+	2	ID=g1.t1.cds_2;Parent=g1.t1_1
C04HBa0239P14.1	AUGUSTUS_tom_cdna	CDS	2031	2829	.	+	1	ID=g1.t1.cds_3;Parent=g1.t1_1
C04HBa0239P14.1	AUGUSTUS_tom_cdna	CDS	4147	4254	.	+	0	ID=g1.t1.cds_4;Parent=g1.t1_1
C04HBa0239P14.1	AUGUSTUS_tom_cdna	stop_codon	4252	4254	.	+	0	Parent=g1.t1_1
C04HBa0239P14.1	AUGUSTUS_ab_initio	gene	1201	4291	1	+	.	ID=g1_2
C04HBa0239P14.1	AUGUSTUS_ab_initio	transcript	1201	4291	.	+	.	ID=g1.t1_2;Parent=g1_2
C04HBa0239P14.1	AUGUSTUS_ab_initio	CDS	1201	1384	.	+	0	ID=g1.t1.cds_5;Parent=g1.t1_2
C04HBa0239P14.1	AUGUSTUS_ab_initio	CDS	1512	1935	.	+	2	ID=g1.t1.cds_6;Parent=g1.t1_2
C04HBa0239P14.1	AUGUSTUS_ab_initio	CDS	2031	2829	.	+	1	ID=g1.t1.cds_7;Parent=g1.t1_2
C04HBa0239P14.1	AUGUSTUS_ab_initio	CDS	3091	3137	.	+	0	ID=g1.t1.cds_8;Parent=g1.t1_2
C04HBa0239P14.1	AUGUSTUS_ab_initio	CDS	4147	4291	.	+	1	ID=g1.t1.cds_9;Parent=g1.t1_2
C04HBa0239P14.1	AUGUSTUS_ab_initio	stop_codon	4289	4291	.	+	0	Parent=g1.t1_2
C04HBa0239P14.1	AUGUSTUS_tom_ugs	gene	1201	4254	1	+	.	ID=g1_3
C04HBa0239P14.1	AUGUSTUS_tom_ugs	transcript	1201	4254	.	+	.	ID=g1.t1_3;Parent=g1_3
C04HBa0239P14.1	AUGUSTUS_tom_ugs	CDS	1201	1384	.	+	0	ID=g1.t1.cds_10;Parent=g1.t1_3
C04HBa0239P14.1	AUGUSTUS_tom_ugs	CDS	1512	1950	.	+	2	ID=g1.t1.cds_11;Parent=g1.t1_3
C04HBa0239P14.1	AUGUSTUS_tom_ugs	CDS	2031	2829	.	+	1	ID=g1.t1.cds_12;Parent=g1.t1_3
C04HBa0239P14.1	AUGUSTUS_tom_ugs	CDS	4147	4254	.	+	0	ID=g1.t1.cds_13;Parent=g1.t1_3
C04HBa0239P14.1	AUGUSTUS_tom_ugs	stop_codon	4252	4254	.	+	0	Parent=g1.t1_3
C04HBa0239P14.1	GenomeThreader_SGN_markers	match	1332	1862	1.000	+	0	ID=SGN-M165-R_alignment_1;Target=SGN-M165-R 43 446 +
C04HBa0239P14.1	GenomeThreader_SGN_markers	match_part	1332	1384	1.000	+	0	ID=GTH_SGN_markers_match_part_1;Target=SGN-M165-R 43 95 +;Parent=SGN-M165-R_alignment_1
C04HBa0239P14.1	GenomeThreader_SGN_markers	match_part	1512	1862	1.000	+	0	ID=GTH_SGN_markers_match_part_2;Target=SGN-M165-R 96 446 +;Parent=SGN-M165-R_alignment_1
C04HBa0239P14.1	AUGUSTUS_tom_pot_cdna	gene	1201	4254	1	+	.	ID=g1_4
C04HBa0239P14.1	AUGUSTUS_tom_pot_cdna	transcript	1201	4254	.	+	.	ID=g1.t1_4;Parent=g1_4
C04HBa0239P14.1	AUGUSTUS_tom_pot_cdna	CDS	1201	1384	.	+	0	ID=g1.t1.cds_14;Parent=g1.t1_4
C04HBa0239P14.1	AUGUSTUS_tom_pot_cdna	CDS	1512	1950	.	+	2	ID=g1.t1.cds_15;Parent=g1.t1_4
C04HBa0239P14.1	AUGUSTUS_tom_pot_cdna	CDS	2031	2829	.	+	1	ID=g1.t1.cds_16;Parent=g1.t1_4
C04HBa0239P14.1	AUGUSTUS_tom_pot_cdna	CDS	4147	4254	.	+	0	ID=g1.t1.cds_17;Parent=g1.t1_4
C04HBa0239P14.1	AUGUSTUS_tom_pot_cdna	stop_codon	4252	4254	.	+	0	Parent=g1.t1_4