##gff-version 3
##sequence-region C04HBa0051O09.1 1 9135
C04HBa0051O09.1	RepeatMasker	nucleotide_motif	963	1098	433	-	0	ID=SONATA2_alignment_1;Target=SONATA2 1 138 -
C04HBa0051O09.1	RepeatMasker	nucleotide_motif	3638	3775	561	-	0	ID=Unknown00020_alignment_1;Target=Unknown00020 233 372 -
C04HBa0051O09.1	RepeatMasker	nucleotide_motif	3655	3952	1213	+	0	ID=Unknown00040_alignment_1;Target=Unknown00040 4370 4593 +
C04HBa0051O09.1	BLAST_tomato_bac_ends	match	1	176	349	+	0	ID=C04HBa0051O09.1-SL_FOS0142J05_pIBF_471839_1;blast_gaps=0;Target=SL_FOS0142J05_pIBF_471839 203 378 -;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=2e-93
C04HBa0051O09.1	BLAST_tomato_bac_ends	match	1313	1483	339	+	0	ID=C04HBa0051O09.1-SL_FOS0018D21_pIBR_416434_1;blast_gaps=0;Target=SL_FOS0018D21_pIBR_416434 214 384 -;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=1e-90
C04HBa0051O09.1	BLAST_tomato_bac_ends	match	1563	1978	680	+	0	ID=C04HBa0051O09.1-LE_HBa0077O05_T7_18729_1;blast_gaps=0;Target=LE_HBa0077O05_T7_18729 21 436 -;is_problematic=0;blast_percent_identity=99.76;blast_mismatches=1;blast_evalue=0.0
C04HBa0051O09.1	BLAST_tomato_bac_ends	match	1563	1962	618	+	0	ID=C04HBa0051O09.1-LE_HBa0103M19_SP6_33252_1;blast_gaps=1;Target=LE_HBa0103M19_SP6_33252 1 401 -;is_problematic=0;blast_percent_identity=98.75;blast_mismatches=4;blast_evalue=1e-174
C04HBa0051O09.1	BLAST_tomato_bac_ends	match	1563	1690	254	+	0	ID=C04HBa0051O09.1-SL_FOS0018D21_pIBR_416434_2;blast_gaps=0;Target=SL_FOS0018D21_pIBR_416434 7 134 -;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=7e-65
C04HBa0051O09.1	BLAST_tomato_bac_ends	match	2130	2436	549	+	0	ID=C04HBa0051O09.1-LE_HBa0063L22_T7_48571_1;blast_gaps=0;Target=LE_HBa0063L22_T7_48571 135 441 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=8e-154
C04HBa0051O09.1	BLAST_tomato_bac_ends	match	2649	2821	335	+	0	ID=C04HBa0051O09.1-LE_HBa0063L22_T7_48571_2;blast_gaps=0;Target=LE_HBa0063L22_T7_48571 654 826 +;is_problematic=0;blast_percent_identity=99.42;blast_mismatches=1;blast_evalue=2e-89
C04HBa0051O09.1	BLAST_tomato_bac_ends	match	3139	3750	1213	+	0	ID=C04HBa0051O09.1-SL_FOS0032M20_pIBF_429815_1;blast_gaps=0;Target=SL_FOS0032M20_pIBF_429815 2 613 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0051O09.1	BLAST_tomato_bac_ends	match	4105	4426	638	+	0	ID=C04HBa0051O09.1-SL_MboI0056B24_T7_156230_1;blast_gaps=0;Target=SL_MboI0056B24_T7_156230 1 322 -;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=1e-180
C04HBa0051O09.1	BLAST_tomato_bac_ends	match	5406	5866	860	+	0	ID=C04HBa0051O09.1-SL_EcoRI0087F08_T7_353139_1;blast_gaps=0;Target=SL_EcoRI0087F08_T7_353139 1 461 +;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0051O09.1	BLAST_tomato_bac_ends	match	5651	6290	1215	+	0	ID=C04HBa0051O09.1-SL_FOS0114N08_pIBR_482425_1;blast_gaps=0;Target=SL_FOS0114N08_pIBR_482425 3 642 -;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0051O09.1	BLAST_tomato_bac_ends	match	6374	7121	1409	+	0	ID=C04HBa0051O09.1-SL_MboI0146H15_SP6_366688_1;blast_gaps=1;Target=SL_MboI0146H15_SP6_366688 1 747 -;is_problematic=0;blast_percent_identity=99.60;blast_mismatches=2;blast_evalue=0.0
C04HBa0051O09.1	BLAST_tomato_bac_ends	match	6926	7607	1310	+	0	ID=C04HBa0051O09.1-SL_FOS0255H09_pIBF_596056_1;blast_gaps=0;Target=SL_FOS0255H09_pIBF_596056 2 683 -;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0051O09.1	BLAST_tomato_bac_ends	match	8508	9056	1025	+	0	ID=C04HBa0051O09.1-SL_EcoRI0005A05_T7_391772_1;blast_gaps=1;Target=SL_EcoRI0005A05_T7_391772 1 550 +;is_problematic=0;blast_percent_identity=99.64;blast_mismatches=1;blast_evalue=0.0
C04HBa0051O09.1	AUGUSTUS_tom_cdna	gene	4832	5722	1	+	.	ID=g1_1
C04HBa0051O09.1	AUGUSTUS_tom_cdna	transcript	4832	5722	.	+	.	ID=g1.t1_1;Parent=g1_1
C04HBa0051O09.1	AUGUSTUS_tom_cdna	start_codon	4832	4834	.	+	0	Parent=g1.t1_1
C04HBa0051O09.1	AUGUSTUS_tom_cdna	CDS	4832	5722	.	+	0	ID=g1.t1.cds_1;Parent=g1.t1_1
C04HBa0051O09.1	AUGUSTUS_tom_cdna	stop_codon	5720	5722	.	+	0	Parent=g1.t1_1
C04HBa0051O09.1	AUGUSTUS_ab_initio	gene	4832	5722	1	+	.	ID=g1_2
C04HBa0051O09.1	AUGUSTUS_ab_initio	transcript	4832	5722	.	+	.	ID=g1.t1_2;Parent=g1_2
C04HBa0051O09.1	AUGUSTUS_ab_initio	start_codon	4832	4834	.	+	0	Parent=g1.t1_2
C04HBa0051O09.1	AUGUSTUS_ab_initio	CDS	4832	5722	.	+	0	ID=g1.t1.cds_2;Parent=g1.t1_2
C04HBa0051O09.1	AUGUSTUS_ab_initio	stop_codon	5720	5722	.	+	0	Parent=g1.t1_2
C04HBa0051O09.1	AUGUSTUS_tom_ugs	gene	4832	5722	1	+	.	ID=g1_3
C04HBa0051O09.1	AUGUSTUS_tom_ugs	transcript	4832	5722	.	+	.	ID=g1.t1_3;Parent=g1_3
C04HBa0051O09.1	AUGUSTUS_tom_ugs	start_codon	4832	4834	.	+	0	Parent=g1.t1_3
C04HBa0051O09.1	AUGUSTUS_tom_ugs	CDS	4832	5722	.	+	0	ID=g1.t1.cds_3;Parent=g1.t1_3
C04HBa0051O09.1	AUGUSTUS_tom_ugs	stop_codon	5720	5722	.	+	0	Parent=g1.t1_3
C04HBa0051O09.1	AUGUSTUS_tom_pot_cdna	gene	4832	5722	1	+	.	ID=g1_4
C04HBa0051O09.1	AUGUSTUS_tom_pot_cdna	transcript	4832	5722	.	+	.	ID=g1.t1_4;Parent=g1_4
C04HBa0051O09.1	AUGUSTUS_tom_pot_cdna	start_codon	4832	4834	.	+	0	Parent=g1.t1_4
C04HBa0051O09.1	AUGUSTUS_tom_pot_cdna	CDS	4832	5722	.	+	0	ID=g1.t1.cds_4;Parent=g1.t1_4
C04HBa0051O09.1	AUGUSTUS_tom_pot_cdna	stop_codon	5720	5722	.	+	0	Parent=g1.t1_4