##gff-version 3
##sequence-region C04HBa0053A08.1 1 28707
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	875	2828	0.905	+	0	ID=SGN-E542858_alignment_1;Target=SGN-E542858 1 757 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	875	1070	0.888	+	0	ID=GTH_SGN_E_tom_potato_match_part_1;Target=SGN-E542858 1 187 +;Parent=SGN-E542858_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	1499	2068	0.911	+	0	ID=GTH_SGN_E_tom_potato_match_part_2;Target=SGN-E542858 188 739 +;Parent=SGN-E542858_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	2811	2828	0.556	+	0	ID=GTH_SGN_E_tom_potato_match_part_3;Target=SGN-E542858 740 757 +;Parent=SGN-E542858_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	893	1505	0.948	+	0	ID=SGN-E262710_alignment_1;Target=SGN-E262710 1 606 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	893	1505	0.948	+	0	ID=GTH_SGN_E_tom_potato_match_part_4;Target=SGN-E262710 1 606 +;Parent=SGN-E262710_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	893	1476	0.949	+	0	ID=SGN-E369760_alignment_1;Target=SGN-E369760 1 577 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	893	1476	0.949	+	0	ID=GTH_SGN_E_tom_potato_match_part_5;Target=SGN-E369760 1 577 +;Parent=SGN-E369760_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	893	1413	0.944	+	0	ID=SGN-E255327_alignment_1;Target=SGN-E255327 1 514 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	893	1413	0.944	+	0	ID=GTH_SGN_E_tom_potato_match_part_6;Target=SGN-E255327 1 514 +;Parent=SGN-E255327_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	903	1305	0.945	+	0	ID=SGN-E262800_alignment_1;Target=SGN-E262800 1 397 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	903	1305	0.945	+	0	ID=GTH_SGN_E_tom_potato_match_part_7;Target=SGN-E262800 1 397 +;Parent=SGN-E262800_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	924	1523	0.932	+	0	ID=SGN-E254845_alignment_1;Target=SGN-E254845 1 591 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	924	1523	0.932	+	0	ID=GTH_SGN_E_tom_potato_match_part_8;Target=SGN-E254845 1 591 +;Parent=SGN-E254845_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	925	1587	0.947	+	0	ID=SGN-E273518_alignment_1;Target=SGN-E273518 1 653 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	925	1587	0.947	+	0	ID=GTH_SGN_E_tom_potato_match_part_9;Target=SGN-E273518 1 653 +;Parent=SGN-E273518_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	958	1292	0.946	+	0	ID=SGN-E258205_alignment_1;Target=SGN-E258205 1 329 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	958	1292	0.946	+	0	ID=GTH_SGN_E_tom_potato_match_part_10;Target=SGN-E258205 1 329 +;Parent=SGN-E258205_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	1025	1739	0.948	+	0	ID=SGN-E263584_alignment_1;Target=SGN-E263584 1 707 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	1025	1739	0.948	+	0	ID=GTH_SGN_E_tom_potato_match_part_11;Target=SGN-E263584 1 707 +;Parent=SGN-E263584_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	1065	1778	0.947	+	0	ID=SGN-E261066_alignment_1;Target=SGN-E261066 1 706 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	1065	1778	0.947	+	0	ID=GTH_SGN_E_tom_potato_match_part_12;Target=SGN-E261066 1 706 +;Parent=SGN-E261066_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	1066	1708	0.946	+	0	ID=SGN-E276669_alignment_1;Target=SGN-E276669 1 635 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	1066	1708	0.946	+	0	ID=GTH_SGN_E_tom_potato_match_part_13;Target=SGN-E276669 1 635 +;Parent=SGN-E276669_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	1182	1800	0.950	+	0	ID=SGN-E253427_alignment_1;Target=SGN-E253427 1 611 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	1182	1800	0.950	+	0	ID=GTH_SGN_E_tom_potato_match_part_14;Target=SGN-E253427 1 611 +;Parent=SGN-E253427_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	1182	1377	0.918	+	0	ID=SGN-E375521_alignment_1;Target=SGN-E375521 1 191 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	1182	1377	0.918	+	0	ID=GTH_SGN_E_tom_potato_match_part_15;Target=SGN-E375521 1 191 +;Parent=SGN-E375521_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	1301	2106	0.944	+	0	ID=SGN-E262550_alignment_1;Target=SGN-E262550 1 727 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	1301	2012	0.944	+	0	ID=GTH_SGN_E_tom_potato_match_part_16;Target=SGN-E262550 1 705 +;Parent=SGN-E262550_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	2085	2106	0.909	+	0	ID=GTH_SGN_E_tom_potato_match_part_17;Target=SGN-E262550 706 727 +;Parent=SGN-E262550_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	1301	1746	0.955	+	0	ID=SGN-E258047_alignment_1;Target=SGN-E258047 1 443 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	1301	1746	0.955	+	0	ID=GTH_SGN_E_tom_potato_match_part_18;Target=SGN-E258047 1 443 +;Parent=SGN-E258047_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	1335	2181	0.969	+	0	ID=SGN-E261540_alignment_1;Target=SGN-E261540 1 772 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	1335	2012	0.968	+	0	ID=GTH_SGN_E_tom_potato_match_part_19;Target=SGN-E261540 1 674 +;Parent=SGN-E261540_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	2085	2181	0.979	+	0	ID=GTH_SGN_E_tom_potato_match_part_20;Target=SGN-E261540 675 772 +;Parent=SGN-E261540_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	1517	2196	0.975	+	0	ID=SGN-E251204_alignment_1;Target=SGN-E251204 1 608 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	1517	2012	0.976	+	0	ID=GTH_SGN_E_tom_potato_match_part_21;Target=SGN-E251204 1 496 +;Parent=SGN-E251204_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	2085	2196	0.973	+	0	ID=GTH_SGN_E_tom_potato_match_part_22;Target=SGN-E251204 497 608 +;Parent=SGN-E251204_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	1632	2320	0.917	+	0	ID=SGN-E419244_alignment_1;Target=SGN-E419244 1 616 -
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	1632	2012	0.919	+	0	ID=GTH_SGN_E_tom_potato_match_part_23;Target=SGN-E419244 1 381 -;Parent=SGN-E419244_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	2085	2320	0.915	+	0	ID=GTH_SGN_E_tom_potato_match_part_24;Target=SGN-E419244 382 616 -;Parent=SGN-E419244_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	2208	2916	0.976	+	0	ID=SGN-E369759_alignment_1;Target=SGN-E369759 1 709 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	2208	2916	0.976	+	0	ID=GTH_SGN_E_tom_potato_match_part_25;Target=SGN-E369759 1 709 +;Parent=SGN-E369759_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	2357	2916	0.971	+	0	ID=SGN-E395006_alignment_1;Target=SGN-E395006 1 560 -
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	2357	2916	0.971	+	0	ID=GTH_SGN_E_tom_potato_match_part_26;Target=SGN-E395006 1 560 -;Parent=SGN-E395006_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	2381	2916	0.957	+	0	ID=SGN-E250407_alignment_1;Target=SGN-E250407 1 536 -
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	2381	2916	0.957	+	0	ID=GTH_SGN_E_tom_potato_match_part_27;Target=SGN-E250407 1 536 -;Parent=SGN-E250407_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	2413	2916	0.960	+	0	ID=SGN-E375520_alignment_1;Target=SGN-E375520 1 504 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	2413	2916	0.960	+	0	ID=GTH_SGN_E_tom_potato_match_part_28;Target=SGN-E375520 1 504 +;Parent=SGN-E375520_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	6495	6722	0.974	+	0	ID=SGN-E261310_alignment_1;Target=SGN-E261310 1 227 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	6495	6722	0.974	+	0	ID=GTH_SGN_E_tom_potato_match_part_29;Target=SGN-E261310 1 227 +;Parent=SGN-E261310_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	16199	17115	0.998	-	0	ID=SGN-E702785_alignment_1;Target=SGN-E702785 1 916 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	16199	17115	0.998	-	0	ID=GTH_SGN_E_tom_potato_match_part_30;Target=SGN-E702785 1 916 +;Parent=SGN-E702785_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	16820	17430	1.000	-	0	ID=SGN-E269665_alignment_1;Target=SGN-E269665 1 611 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	16820	17430	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_31;Target=SGN-E269665 1 611 +;Parent=SGN-E269665_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	16847	17414	1.000	-	0	ID=SGN-E304656_alignment_1;Target=SGN-E304656 1 568 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	16847	17414	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_32;Target=SGN-E304656 1 568 +;Parent=SGN-E304656_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	16946	17544	1.000	-	0	ID=SGN-E248580_alignment_1;Target=SGN-E248580 1 599 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	16946	17544	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_33;Target=SGN-E248580 1 599 +;Parent=SGN-E248580_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	16966	17628	0.900	-	0	ID=SGN-E475028_alignment_1;Target=SGN-E475028 1 660 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	16966	17628	0.900	-	0	ID=GTH_SGN_E_tom_potato_match_part_34;Target=SGN-E475028 1 660 +;Parent=SGN-E475028_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	17016	17619	0.998	-	0	ID=SGN-E205330_alignment_1;Target=SGN-E205330 1 604 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	17016	17619	0.998	-	0	ID=GTH_SGN_E_tom_potato_match_part_35;Target=SGN-E205330 1 604 +;Parent=SGN-E205330_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	17016	17529	1.000	-	0	ID=SGN-E269573_alignment_1;Target=SGN-E269573 1 514 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	17016	17529	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_36;Target=SGN-E269573 1 514 +;Parent=SGN-E269573_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	17041	17606	1.000	-	0	ID=SGN-E330646_alignment_1;Target=SGN-E330646 1 566 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	17041	17606	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_37;Target=SGN-E330646 1 566 +;Parent=SGN-E330646_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	17045	17545	1.000	-	0	ID=SGN-E214288_alignment_1;Target=SGN-E214288 1 501 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	17045	17545	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_38;Target=SGN-E214288 1 501 +;Parent=SGN-E214288_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	17061	17639	0.993	-	0	ID=SGN-E271538_alignment_1;Target=SGN-E271538 1 579 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	17061	17639	0.993	-	0	ID=GTH_SGN_E_tom_potato_match_part_39;Target=SGN-E271538 1 579 +;Parent=SGN-E271538_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	17207	17546	0.991	-	0	ID=SGN-E330949_alignment_1;Target=SGN-E330949 1 340 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	17207	17546	0.991	-	0	ID=GTH_SGN_E_tom_potato_match_part_40;Target=SGN-E330949 1 340 +;Parent=SGN-E330949_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match	17244	17691	0.980	+	0	ID=SGN-E287918_alignment_1;Target=SGN-E287918 1 448 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	match_part	17244	17691	0.980	+	0	ID=GTH_SGN_E_tom_potato_match_part_41;Target=SGN-E287918 1 448 +;Parent=SGN-E287918_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	gene	875	2916	.	+	0	ID=GTH_SGN_E_tom_potato_gene_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	mRNA	893	2916	.	+	0	ID=GTH_SGN_E_tom_potato_gene_1_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	exon	893	2012	0.948	+	0	ID=GTH_SGN_E_tom_potato_exon_1;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	exon	2085	2916	0.976	+	0	ID=GTH_SGN_E_tom_potato_exon_2;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	mRNA	875	2828	.	+	0	ID=GTH_SGN_E_tom_potato_gene_1_AGS_2;Parent=GTH_SGN_E_tom_potato_gene_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	exon	875	1070	0.888	+	0	ID=GTH_SGN_E_tom_potato_exon_3;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	exon	1499	2068	0.911	+	0	ID=GTH_SGN_E_tom_potato_exon_4;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	exon	2811	2828	0.556	+	0	ID=GTH_SGN_E_tom_potato_exon_5;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	gene	6495	6722	.	+	0	ID=GTH_SGN_E_tom_potato_gene_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	mRNA	6495	6722	.	+	0	ID=GTH_SGN_E_tom_potato_gene_2_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	exon	6495	6722	0.974	+	0	ID=GTH_SGN_E_tom_potato_exon_6;Parent=GTH_SGN_E_tom_potato_gene_2_AGS_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	gene	16199	17639	.	-	0	ID=GTH_SGN_E_tom_potato_gene_3
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	mRNA	16199	17639	.	-	0	ID=GTH_SGN_E_tom_potato_gene_3_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_3
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	exon	16199	17639	0.998	-	0	ID=GTH_SGN_E_tom_potato_exon_7;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	gene	17244	17691	.	+	0	ID=GTH_SGN_E_tom_potato_gene_4
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	mRNA	17244	17691	.	+	0	ID=GTH_SGN_E_tom_potato_gene_4_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_4
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato_potato	exon	17244	17691	0.980	+	0	ID=GTH_SGN_E_tom_potato_exon_8;Parent=GTH_SGN_E_tom_potato_gene_4_AGS_1
C04HBa0053A08.1	RepeatMasker	nucleotide_motif	491	616	962	-	0	ID=Copia00033_alignment_1;Target=Copia00033 250 376 -
C04HBa0053A08.1	RepeatMasker	nucleotide_motif	608	958	2317	+	0	ID=Copia00094_alignment_1;Target=Copia00094 5277 5605 +
C04HBa0053A08.1	RepeatMasker	nucleotide_motif	817	6209	41709	-	0	ID=Copia00006_alignment_1;Target=Copia00006 138 5500 -
C04HBa0053A08.1	RepeatMasker	nucleotide_motif	6208	6890	4935	-	0	ID=Copia00112_alignment_1;Target=Copia00112 4469 5141 -
C04HBa0053A08.1	RepeatMasker	nucleotide_motif	10151	10225	286	-	0	ID=STOWAWAY50_OS_alignment_1;Target=STOWAWAY50_OS 83 157 -
C04HBa0053A08.1	RepeatMasker	nucleotide_motif	10186	10249	277	-	0	ID=Copia00181_alignment_1;Target=Copia00181 1796 1857 -
C04HBa0053A08.1	RepeatMasker	nucleotide_motif	10360	12303	11576	-	0	ID=Gypsy00073_alignment_1;Target=Gypsy00073 2894 4788 -
C04HBa0053A08.1	RepeatMasker	nucleotide_motif	13481	13800	1179	-	0	ID=Unknown00034_alignment_1;Target=Unknown00034 3730 4054 -
C04HBa0053A08.1	RepeatMasker	nucleotide_motif	19780	20421	3764	+	0	ID=Gypsy00080_alignment_1;Target=Gypsy00080 7294 7944 +
C04HBa0053A08.1	RepeatMasker	nucleotide_motif	25779	25994	255	+	0	ID=Gypsy00016_alignment_1;Target=Gypsy00016 5208 5423 +
C04HBa0053A08.1	RepeatMasker	nucleotide_motif	26256	26347	336	+	0	ID=Gypsy00042_alignment_1;Target=Gypsy00042 6024 6113 +
C04HBa0053A08.1	RepeatMasker	nucleotide_motif	26394	26555	731	+	0	ID=Gypsy00019_alignment_1;Target=Gypsy00019 1268 1426 +
C04HBa0053A08.1	RepeatMasker	nucleotide_motif	26554	27912	8296	+	0	ID=Gypsy00096_alignment_1;Target=Gypsy00096 4220 5508 +
C04HBa0053A08.1	RepeatMasker	nucleotide_motif	26714	28348	8554	+	0	ID=Unknown00034_alignment_2;Target=Unknown00034 2000 3659 +
C04HBa0053A08.1	RepeatMasker	nucleotide_motif	28350	28431	388	+	0	ID=Gypsy00088_alignment_1;Target=Gypsy00088 183 264 +
C04HBa0053A08.1	BLAST_tomato_bacs	match	1537	4582	2418	+	0	ID=C00HBa0027M11.1_rev_alignment_1;blast_gaps=9;Target=clone-C00HBa0027M11.1 102733 105774 -;blast_percent_identity=85.17;blast_mismatches=431;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10521	11704	1221	+	0	ID=C01HBa0032H01.1_rev_alignment_1;blast_gaps=20;Target=clone-C01HBa0032H01.1 67826 69006 -;blast_percent_identity=89.46;blast_mismatches=101;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10529	11707	1292	+	0	ID=C02HBa0122C10.1_rev_alignment_1;blast_gaps=15;Target=clone-C02HBa0122C10.1 5 1183 -;blast_percent_identity=89.97;blast_mismatches=103;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10357	11424	1195	+	0	ID=C02SLe0101H16.1_fwd_alignment_1;blast_gaps=15;Target=clone-C02SLe0101H16.1 81112 82181 +;blast_percent_identity=90.63;blast_mismatches=83;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	2805	6209	5311	+	0	ID=C04HBa0027G19.1_rev_alignment_1;blast_gaps=6;Target=clone-C04HBa0027G19.1 72763 76168 -;blast_percent_identity=94.81;blast_mismatches=162;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	1580	5209	3881	+	0	ID=C04HBa0027O01.1_fwd_alignment_1;blast_gaps=13;Target=clone-C04HBa0027O01.1 111183 114818 +;blast_percent_identity=88.75;blast_mismatches=390;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10360	11374	1019	+	0	ID=C04HBa0077O05.2_fwd_alignment_1;blast_gaps=18;Target=clone-C04HBa0077O05.2 95187 96202 +;blast_percent_identity=89.48;blast_mismatches=85;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10535	11688	971	+	0	ID=C04HBa0080C13.1_fwd_alignment_1;blast_gaps=25;Target=clone-C04HBa0080C13.1 72699 73844 +;blast_percent_identity=87.34;blast_mismatches=110;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10614	11685	965	+	0	ID=C04HBa0080C13.1_fwd_alignment_2;blast_gaps=24;Target=clone-C04HBa0080C13.1 69256 70321 +;blast_percent_identity=88.13;blast_mismatches=93;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	1003	4474	5400	+	0	ID=C04HBa0128G23.1_rev_alignment_1;blast_gaps=9;Target=clone-C04HBa0128G23.1 98710 102174 -;blast_percent_identity=94.83;blast_mismatches=153;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	4844	6210	2155	+	0	ID=C04HBa0128G23.1_rev_alignment_2;blast_gaps=2;Target=clone-C04HBa0128G23.1 152265 153634 -;blast_percent_identity=95.26;blast_mismatches=62;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	4873	6210	2171	+	0	ID=C04HBa0128G23.1_rev_alignment_3;blast_gaps=2;Target=clone-C04HBa0128G23.1 88066 89405 -;blast_percent_identity=95.90;blast_mismatches=51;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	1513	3458	1820	+	0	ID=C04HBa0147F16.1_rev_alignment_1;blast_gaps=11;Target=clone-C04HBa0147F16.1 58266 60206 -;blast_percent_identity=87.12;blast_mismatches=227;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	27237	28346	1080	+	0	ID=C04SLm0130G07.1_fwd_alignment_1;blast_gaps=15;Target=clone-C04SLm0130G07.1 60562 61662 +;blast_percent_identity=88.59;blast_mismatches=112;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	2279	6210	6215	+	0	ID=C04SLm0134J13.1_rev_alignment_1;blast_gaps=9;Target=clone-C04SLm0134J13.1 631 4566 -;blast_percent_identity=95.13;blast_mismatches=172;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10521	11688	801	+	0	ID=C06HBa0049I02.1_rev_alignment_1;blast_gaps=27;Target=clone-C06HBa0049I02.1 71312 72475 -;blast_percent_identity=85.57;blast_mismatches=133;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	2742	3759	1608	+	0	ID=C06HBa0066P09.1_fwd_alignment_1;blast_gaps=4;Target=clone-C06HBa0066P09.1 31467 32499 +;blast_percent_identity=94.68;blast_mismatches=38;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	4007	6209	3586	+	0	ID=C06HBa0066P09.1_fwd_alignment_2;blast_gaps=5;Target=clone-C06HBa0066P09.1 1 2197 +;blast_percent_identity=95.87;blast_mismatches=79;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	1545	3287	2686	+	0	ID=C06HBa0153O03.2_fwd_alignment_1;blast_gaps=4;Target=clone-C06HBa0153O03.2 67001 68741 +;blast_percent_identity=94.61;blast_mismatches=88;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	1849	5520	6389	+	0	ID=C06HBa0225A15.1_fwd_alignment_1;blast_gaps=6;Target=clone-C06HBa0225A15.1 30357 34034 +;blast_percent_identity=97.01;blast_mismatches=98;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	4519	6209	2698	+	0	ID=C06HBa0288L16.1_rev_alignment_1;blast_gaps=4;Target=clone-C06HBa0288L16.1 72416 74101 -;blast_percent_identity=95.51;blast_mismatches=65;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10371	11712	1568	+	0	ID=C06SLm0005H10.1_rev_alignment_1;blast_gaps=21;Target=clone-C06SLm0005H10.1 38375 39713 -;blast_percent_identity=91.35;blast_mismatches=92;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10360	11704	2141	+	0	ID=C06SLm0009E16.1_fwd_alignment_1;blast_gaps=6;Target=clone-C06SLm0009E16.1 109611 110953 +;blast_percent_identity=95.70;blast_mismatches=48;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10520	11704	1943	+	0	ID=C06SLm0009E16.1_rev_alignment_1;blast_gaps=4;Target=clone-C06SLm0009E16.1 9343 10523 -;blast_percent_identity=95.95;blast_mismatches=42;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10360	11704	2141	+	0	ID=C06SLm0115P13.1_rev_alignment_1;blast_gaps=6;Target=clone-C06SLm0115P13.1 158731 160073 -;blast_percent_identity=95.70;blast_mismatches=48;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10520	11704	1943	+	0	ID=C06SLm0115P13.1_rev_alignment_2;blast_gaps=4;Target=clone-C06SLm0115P13.1 13339 14519 -;blast_percent_identity=95.95;blast_mismatches=42;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10360	11426	1213	+	0	ID=C07HBa0003E13.2_rev_alignment_1;blast_gaps=13;Target=clone-C07HBa0003E13.2 111396 112463 -;blast_percent_identity=90.53;blast_mismatches=83;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10360	11426	1245	+	0	ID=C07HBa0003E13.2_rev_alignment_2;blast_gaps=12;Target=clone-C07HBa0003E13.2 118514 119580 -;blast_percent_identity=90.88;blast_mismatches=82;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	3958	5593	2934	+	0	ID=C07HBa0003E13.2_rev_alignment_3;blast_gaps=0;Target=clone-C07HBa0003E13.2 96894 98529 -;blast_percent_identity=97.62;blast_mismatches=39;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	3701	5591	2135	+	0	ID=C07HBa0038A02.1_rev_alignment_1;blast_gaps=6;Target=clone-C07HBa0038A02.1 55074 56955 -;blast_percent_identity=89.48;blast_mismatches=188;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	27237	28349	1344	+	0	ID=C07SLe0008H22.2_fwd_alignment_1;blast_gaps=9;Target=clone-C07SLe0008H22.2 50610 51712 +;blast_percent_identity=90.78;blast_mismatches=85;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	1513	5325	6528	+	0	ID=C07SLe0011A19.1_rev_alignment_1;blast_gaps=7;Target=clone-C07SLe0011A19.1 121668 125487 -;blast_percent_identity=96.68;blast_mismatches=114;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10521	11685	1126	+	0	ID=C07SLe0098F01.1_rev_alignment_1;blast_gaps=20;Target=clone-C07SLe0098F01.1 24141 25312 -;blast_percent_identity=88.50;blast_mismatches=107;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10358	11707	1380	+	0	ID=C07SLm0031B19.1_fwd_alignment_1;blast_gaps=16;Target=clone-C07SLm0031B19.1 43967 45309 +;blast_percent_identity=89.17;blast_mismatches=126;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	1510	5591	6175	+	0	ID=C07SLm0121E18.2_rev_alignment_1;blast_gaps=13;Target=clone-C07SLm0121E18.2 63547 67625 -;blast_percent_identity=94.30;blast_mismatches=212;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	1513	5325	6528	+	0	ID=C07SLm0121F21.2_fwd_alignment_1;blast_gaps=7;Target=clone-C07SLm0121F21.2 128598 132417 +;blast_percent_identity=96.68;blast_mismatches=114;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	1003	5593	7785	+	0	ID=C08HBa0014G04.1_rev_alignment_1;blast_gaps=10;Target=clone-C08HBa0014G04.1 29734 34334 -;blast_percent_identity=96.59;blast_mismatches=135;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	27241	28348	1471	+	0	ID=C08HBa0027D09.1_rev_alignment_1;blast_gaps=6;Target=clone-C08HBa0027D09.1 46001 47102 -;blast_percent_identity=92.16;blast_mismatches=77;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	2095	5593	6110	+	0	ID=C08HBa0034F03.1_rev_alignment_1;blast_gaps=3;Target=clone-C08HBa0034F03.1 35348 38855 -;blast_percent_identity=97.01;blast_mismatches=96;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	1439	4843	5697	+	0	ID=C08HBa0054I14.1_fwd_alignment_1;blast_gaps=7;Target=clone-C08HBa0054I14.1 31260 34669 +;blast_percent_identity=96.34;blast_mismatches=110;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	4850	6209	2242	+	0	ID=C08HBa0054I14.1_fwd_alignment_2;blast_gaps=5;Target=clone-C08HBa0054I14.1 34687 36046 +;blast_percent_identity=96.41;blast_mismatches=41;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	1003	5593	7783	+	0	ID=C08HBa0054I14.1_rev_alignment_1;blast_gaps=12;Target=clone-C08HBa0054I14.1 2699 7293 -;blast_percent_identity=96.66;blast_mismatches=130;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10360	11707	2038	+	0	ID=C08HBa0058M16.1_rev_alignment_1;blast_gaps=9;Target=clone-C08HBa0058M16.1 24973 26320 -;blast_percent_identity=94.83;blast_mismatches=60;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10537	11704	1530	+	0	ID=C08HBa0069E09.1_fwd_alignment_1;blast_gaps=8;Target=clone-C08HBa0069E09.1 31438 32610 +;blast_percent_identity=92.09;blast_mismatches=84;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10360	11374	1211	+	0	ID=C08HBa0101G12.1_rev_alignment_1;blast_gaps=12;Target=clone-C08HBa0101G12.1 103884 104900 -;blast_percent_identity=91.40;blast_mismatches=74;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10360	11374	1235	+	0	ID=C08HBa0101G12.1_rev_alignment_2;blast_gaps=12;Target=clone-C08HBa0101G12.1 96850 97866 -;blast_percent_identity=91.69;blast_mismatches=71;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	1003	5593	7783	+	0	ID=C08HBa0129D03.1_fwd_alignment_1;blast_gaps=12;Target=clone-C08HBa0129D03.1 2818 7412 +;blast_percent_identity=96.66;blast_mismatches=130;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10360	11379	644	+	0	ID=C08HBa0139J15.1_fwd_alignment_1;blast_gaps=24;Target=clone-C08HBa0139J15.1 55612 56634 +;blast_percent_identity=85.26;blast_mismatches=120;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10465	11707	1144	+	0	ID=C08HBa0216M19.1_rev_alignment_1;blast_gaps=26;Target=clone-C08HBa0216M19.1 38458 39692 -;blast_percent_identity=88.62;blast_mismatches=107;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	4844	6209	2216	+	0	ID=C08HBa0295M05.1_fwd_alignment_1;blast_gaps=2;Target=clone-C08HBa0295M05.1 1 1375 +;blast_percent_identity=95.64;blast_mismatches=51;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	1534	2840	783	+	0	ID=C08HBa0298D02.1_fwd_alignment_1;blast_gaps=11;Target=clone-C08HBa0298D02.1 75818 77119 +;blast_percent_identity=83.07;blast_mismatches=198;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10520	11685	1473	+	0	ID=C08SLe0009O08.1_rev_alignment_1;blast_gaps=16;Target=clone-C08SLe0009O08.1 57762 58928 -;blast_percent_identity=92.09;blast_mismatches=74;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10537	11701	809	+	0	ID=C08SLe0028E18.2_fwd_alignment_1;blast_gaps=24;Target=clone-C08SLe0028E18.2 33771 34936 +;blast_percent_identity=85.52;blast_mismatches=140;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10537	11701	825	+	0	ID=C08SLe0028E18.2_rev_alignment_1;blast_gaps=25;Target=clone-C08SLe0028E18.2 98403 99567 -;blast_percent_identity=85.77;blast_mismatches=136;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10360	11349	910	+	0	ID=C08SLe0129C18.1_fwd_alignment_1;blast_gaps=15;Target=clone-C08SLe0129C18.1 18641 19634 +;blast_percent_identity=88.30;blast_mismatches=101;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10359	11349	936	+	0	ID=C08SLe0129C18.1_fwd_alignment_2;blast_gaps=15;Target=clone-C08SLe0129C18.1 11656 12650 +;blast_percent_identity=88.61;blast_mismatches=98;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10521	11701	1027	+	0	ID=C08SLm0026F15.1_rev_alignment_1;blast_gaps=22;Target=clone-C08SLm0026F15.1 74750 75927 -;blast_percent_identity=87.59;blast_mismatches=121;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10521	11701	1051	+	0	ID=C08SLm0026F15.1_rev_alignment_2;blast_gaps=21;Target=clone-C08SLm0026F15.1 67951 69129 -;blast_percent_identity=87.76;blast_mismatches=120;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	27246	28348	1495	+	0	ID=C08SLm0108O09.1_fwd_alignment_1;blast_gaps=6;Target=clone-C08SLm0108O09.1 53712 54807 +;blast_percent_identity=92.49;blast_mismatches=72;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	3404	5545	2101	+	0	ID=C08SLm0114A09.1_fwd_alignment_1;blast_gaps=11;Target=clone-C08SLm0114A09.1 19005 21140 +;blast_percent_identity=87.80;blast_mismatches=246;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	2086	3391	1366	+	0	ID=C08SLm0114A09.1_fwd_alignment_2;blast_gaps=6;Target=clone-C08SLm0114A09.1 17686 18985 +;blast_percent_identity=88.60;blast_mismatches=141;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	1003	6534	9781	+	0	ID=C09HBa0099F14.1_rev_alignment_1;blast_gaps=9;Target=clone-C09HBa0099F14.1 59165 64701 -;blast_percent_identity=97.55;blast_mismatches=119;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10360	11686	1633	+	0	ID=C09HBa0130D14.1_rev_alignment_1;blast_gaps=12;Target=clone-C09HBa0130D14.1 41682 43004 -;blast_percent_identity=91.59;blast_mismatches=98;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	1283	5593	7559	+	0	ID=C10HBa0041K23.1_fwd_alignment_1;blast_gaps=8;Target=clone-C10HBa0041K23.1 66858 71168 +;blast_percent_identity=97.29;blast_mismatches=99;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	1003	2553	2512	+	0	ID=C10HBa0111D09.2_rev_alignment_1;blast_gaps=9;Target=clone-C10HBa0111D09.2 98028 99567 -;blast_percent_identity=96.20;blast_mismatches=44;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	2570	6210	6441	+	0	ID=C10HBa0111D09.2_rev_alignment_2;blast_gaps=6;Target=clone-C10HBa0111D09.2 94353 97998 -;blast_percent_identity=97.53;blast_mismatches=77;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10521	11688	890	+	0	ID=C11HBa0072I13.1_fwd_alignment_1;blast_gaps=27;Target=clone-C11HBa0072I13.1 105890 107053 +;blast_percent_identity=86.57;blast_mismatches=123;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	1309	4545	5386	+	0	ID=C11HBa0119D16.2_fwd_alignment_1;blast_gaps=10;Target=clone-C11HBa0119D16.2 57376 60609 +;blast_percent_identity=96.21;blast_mismatches=96;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	4541	6209	2817	+	0	ID=C11HBa0119D16.2_fwd_alignment_2;blast_gaps=3;Target=clone-C11HBa0119D16.2 80882 82545 +;blast_percent_identity=96.64;blast_mismatches=51;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	1004	2072	1431	+	0	ID=C11HBa0245M17.2_rev_alignment_1;blast_gaps=7;Target=clone-C11HBa0245M17.2 43201 44258 -;blast_percent_identity=92.72;blast_mismatches=63;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	2076	6207	6490	+	0	ID=C11HBa0245M17.2_rev_alignment_2;blast_gaps=9;Target=clone-C11HBa0245M17.2 21394 25533 -;blast_percent_identity=95.03;blast_mismatches=188;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	1003	2013	1588	+	0	ID=C11SLm0052K14.1_fwd_alignment_1;blast_gaps=8;Target=clone-C11SLm0052K14.1 76998 77994 +;blast_percent_identity=95.95;blast_mismatches=25;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	2083	5592	6058	+	0	ID=C11SLm0052K14.1_fwd_alignment_2;blast_gaps=5;Target=clone-C11SLm0052K14.1 77992 81506 +;blast_percent_identity=96.82;blast_mismatches=101;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10535	11714	1215	+	0	ID=C12HBa0009J11.1_fwd_alignment_1;blast_gaps=16;Target=clone-C12HBa0009J11.1 44386 45566 +;blast_percent_identity=89.16;blast_mismatches=110;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	10535	11714	1215	+	0	ID=C12HBa0009J11.1_fwd_alignment_2;blast_gaps=17;Target=clone-C12HBa0009J11.1 37299 38478 +;blast_percent_identity=89.24;blast_mismatches=108;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	1003	5593	8092	+	0	ID=C12HBa0161H10.1_fwd_alignment_1;blast_gaps=11;Target=clone-C12HBa0161H10.1 44939 49525 +;blast_percent_identity=97.46;blast_mismatches=93;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	1003	2013	1731	+	0	ID=C12HBa0211M21.1_rev_alignment_1;blast_gaps=4;Target=clone-C12HBa0211M21.1 43848 44855 -;blast_percent_identity=97.53;blast_mismatches=20;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bacs	match	3088	5593	4557	+	0	ID=C12HBa0211M21.1_rev_alignment_2;blast_gaps=1;Target=clone-C12HBa0211M21.1 41060 43572 -;blast_percent_identity=97.85;blast_mismatches=47;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bac_ends	clone_start	3094	3831	1439	+	0	ID=C04HBa0053A08.1-SL_EcoRI0131O02_SP6_335510_1;blast_gaps=0;Target=SL_EcoRI0131O02_SP6_335510 2 739 +;is_problematic=0;blast_percent_identity=99.59;blast_mismatches=3;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bac_ends	clone_start	4824	5484	1247	+	0	ID=C04HBa0053A08.1-SL_FOS0187D17_pIBF_543656_1;blast_gaps=0;Target=SL_FOS0187D17_pIBF_543656 2 662 +;is_problematic=0;blast_percent_identity=98.79;blast_mismatches=8;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bac_ends	clone_start	4845	5486	1265	+	0	ID=C04HBa0053A08.1-LE_HBa0041H18_T7_42995_1;blast_gaps=0;Target=LE_HBa0041H18_T7_42995 1 642 +;is_problematic=0;blast_percent_identity=99.84;blast_mismatches=1;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bac_ends	clone_start	5537	6073	993	+	0	ID=C04HBa0053A08.1-SL_MboI0014D13_SP6_212893_1;blast_gaps=1;Target=SL_MboI0014D13_SP6_212893 3 538 +;is_problematic=0;blast_percent_identity=99.63;blast_mismatches=1;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bac_ends	clone_start	8204	8811	1092	+	0	ID=C04HBa0053A08.1-LE_HBa0173D05_SP6_104984_1;blast_gaps=1;Target=LE_HBa0173D05_SP6_104984 1 609 -;is_problematic=0;blast_percent_identity=99.51;blast_mismatches=2;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bac_ends	clone_start	11809	12331	1037	+	0	ID=C04HBa0053A08.1-SL_EcoRI0096O22_T7_359359_1;blast_gaps=0;Target=SL_EcoRI0096O22_T7_359359 119 641 -;is_problematic=0;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bac_ends	clone_start	12515	13103	1120	+	0	ID=C04HBa0053A08.1-SL_EcoRI0120P08_SP6_327506_1;blast_gaps=0;Target=SL_EcoRI0120P08_SP6_327506 41 629 +;is_problematic=0;blast_percent_identity=98.98;blast_mismatches=6;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bac_ends	clone_start	27962	28689	1435	+	0	ID=C04HBa0053A08.1-LE_HBa0077M17_SP6_18656_1;blast_gaps=0;Target=LE_HBa0077M17_SP6_18656 1 728 -;is_problematic=0;blast_percent_identity=99.86;blast_mismatches=1;blast_evalue=0.0
C04HBa0053A08.1	BLAST_tomato_bac_ends	clone_start	27990	28707	1400	+	0	ID=C04HBa0053A08.1-LE_HBa0053A08_T7_43407_1;blast_gaps=0;Target=LE_HBa0053A08_T7_43407 23 740 -;is_problematic=0;blast_percent_identity=99.58;blast_mismatches=3;blast_evalue=0.0
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	875	2828	0.905	+	0	ID=SGN-E542858_alignment_2;Target=SGN-E542858 1 757 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	875	1070	0.888	+	0	ID=GTH_SGN_E_tom_match_part_1;Target=SGN-E542858 1 187 +;Parent=SGN-E542858_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	1499	2068	0.911	+	0	ID=GTH_SGN_E_tom_match_part_2;Target=SGN-E542858 188 739 +;Parent=SGN-E542858_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	2811	2828	0.556	+	0	ID=GTH_SGN_E_tom_match_part_3;Target=SGN-E542858 740 757 +;Parent=SGN-E542858_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	893	1505	0.948	+	0	ID=SGN-E262710_alignment_2;Target=SGN-E262710 1 606 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	893	1505	0.948	+	0	ID=GTH_SGN_E_tom_match_part_4;Target=SGN-E262710 1 606 +;Parent=SGN-E262710_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	893	1476	0.949	+	0	ID=SGN-E369760_alignment_2;Target=SGN-E369760 1 577 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	893	1476	0.949	+	0	ID=GTH_SGN_E_tom_match_part_5;Target=SGN-E369760 1 577 +;Parent=SGN-E369760_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	893	1413	0.944	+	0	ID=SGN-E255327_alignment_2;Target=SGN-E255327 1 514 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	893	1413	0.944	+	0	ID=GTH_SGN_E_tom_match_part_6;Target=SGN-E255327 1 514 +;Parent=SGN-E255327_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	903	1305	0.945	+	0	ID=SGN-E262800_alignment_2;Target=SGN-E262800 1 397 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	903	1305	0.945	+	0	ID=GTH_SGN_E_tom_match_part_7;Target=SGN-E262800 1 397 +;Parent=SGN-E262800_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	924	1523	0.932	+	0	ID=SGN-E254845_alignment_2;Target=SGN-E254845 1 591 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	924	1523	0.932	+	0	ID=GTH_SGN_E_tom_match_part_8;Target=SGN-E254845 1 591 +;Parent=SGN-E254845_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	925	1587	0.947	+	0	ID=SGN-E273518_alignment_2;Target=SGN-E273518 1 653 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	925	1587	0.947	+	0	ID=GTH_SGN_E_tom_match_part_9;Target=SGN-E273518 1 653 +;Parent=SGN-E273518_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	958	1292	0.946	+	0	ID=SGN-E258205_alignment_2;Target=SGN-E258205 1 329 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	958	1292	0.946	+	0	ID=GTH_SGN_E_tom_match_part_10;Target=SGN-E258205 1 329 +;Parent=SGN-E258205_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	1025	1739	0.948	+	0	ID=SGN-E263584_alignment_2;Target=SGN-E263584 1 707 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	1025	1739	0.948	+	0	ID=GTH_SGN_E_tom_match_part_11;Target=SGN-E263584 1 707 +;Parent=SGN-E263584_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	1065	1778	0.947	+	0	ID=SGN-E261066_alignment_2;Target=SGN-E261066 1 706 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	1065	1778	0.947	+	0	ID=GTH_SGN_E_tom_match_part_12;Target=SGN-E261066 1 706 +;Parent=SGN-E261066_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	1066	1708	0.946	+	0	ID=SGN-E276669_alignment_2;Target=SGN-E276669 1 635 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	1066	1708	0.946	+	0	ID=GTH_SGN_E_tom_match_part_13;Target=SGN-E276669 1 635 +;Parent=SGN-E276669_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	1182	1800	0.950	+	0	ID=SGN-E253427_alignment_2;Target=SGN-E253427 1 611 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	1182	1800	0.950	+	0	ID=GTH_SGN_E_tom_match_part_14;Target=SGN-E253427 1 611 +;Parent=SGN-E253427_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	1182	1377	0.918	+	0	ID=SGN-E375521_alignment_2;Target=SGN-E375521 1 191 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	1182	1377	0.918	+	0	ID=GTH_SGN_E_tom_match_part_15;Target=SGN-E375521 1 191 +;Parent=SGN-E375521_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	1301	2106	0.944	+	0	ID=SGN-E262550_alignment_2;Target=SGN-E262550 1 727 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	1301	2012	0.944	+	0	ID=GTH_SGN_E_tom_match_part_16;Target=SGN-E262550 1 705 +;Parent=SGN-E262550_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	2085	2106	0.909	+	0	ID=GTH_SGN_E_tom_match_part_17;Target=SGN-E262550 706 727 +;Parent=SGN-E262550_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	1301	1746	0.955	+	0	ID=SGN-E258047_alignment_2;Target=SGN-E258047 1 443 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	1301	1746	0.955	+	0	ID=GTH_SGN_E_tom_match_part_18;Target=SGN-E258047 1 443 +;Parent=SGN-E258047_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	1335	2181	0.969	+	0	ID=SGN-E261540_alignment_2;Target=SGN-E261540 1 772 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	1335	2012	0.968	+	0	ID=GTH_SGN_E_tom_match_part_19;Target=SGN-E261540 1 674 +;Parent=SGN-E261540_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	2085	2181	0.979	+	0	ID=GTH_SGN_E_tom_match_part_20;Target=SGN-E261540 675 772 +;Parent=SGN-E261540_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	1517	2196	0.975	+	0	ID=SGN-E251204_alignment_2;Target=SGN-E251204 1 608 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	1517	2012	0.976	+	0	ID=GTH_SGN_E_tom_match_part_21;Target=SGN-E251204 1 496 +;Parent=SGN-E251204_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	2085	2196	0.973	+	0	ID=GTH_SGN_E_tom_match_part_22;Target=SGN-E251204 497 608 +;Parent=SGN-E251204_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	2208	2916	0.976	+	0	ID=SGN-E369759_alignment_2;Target=SGN-E369759 1 709 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	2208	2916	0.976	+	0	ID=GTH_SGN_E_tom_match_part_23;Target=SGN-E369759 1 709 +;Parent=SGN-E369759_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	2357	2916	0.971	+	0	ID=SGN-E395006_alignment_2;Target=SGN-E395006 1 560 -
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	2357	2916	0.971	+	0	ID=GTH_SGN_E_tom_match_part_24;Target=SGN-E395006 1 560 -;Parent=SGN-E395006_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	2381	2916	0.957	+	0	ID=SGN-E250407_alignment_2;Target=SGN-E250407 1 536 -
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	2381	2916	0.957	+	0	ID=GTH_SGN_E_tom_match_part_25;Target=SGN-E250407 1 536 -;Parent=SGN-E250407_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	2413	2916	0.960	+	0	ID=SGN-E375520_alignment_2;Target=SGN-E375520 1 504 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	2413	2916	0.960	+	0	ID=GTH_SGN_E_tom_match_part_26;Target=SGN-E375520 1 504 +;Parent=SGN-E375520_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	6495	6722	0.974	+	0	ID=SGN-E261310_alignment_2;Target=SGN-E261310 1 227 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	6495	6722	0.974	+	0	ID=GTH_SGN_E_tom_match_part_27;Target=SGN-E261310 1 227 +;Parent=SGN-E261310_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	16199	17115	0.998	-	0	ID=SGN-E702785_alignment_2;Target=SGN-E702785 1 916 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	16199	17115	0.998	-	0	ID=GTH_SGN_E_tom_match_part_28;Target=SGN-E702785 1 916 +;Parent=SGN-E702785_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	16820	17430	1.000	-	0	ID=SGN-E269665_alignment_2;Target=SGN-E269665 1 611 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	16820	17430	1.000	-	0	ID=GTH_SGN_E_tom_match_part_29;Target=SGN-E269665 1 611 +;Parent=SGN-E269665_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	16847	17414	1.000	-	0	ID=SGN-E304656_alignment_2;Target=SGN-E304656 1 568 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	16847	17414	1.000	-	0	ID=GTH_SGN_E_tom_match_part_30;Target=SGN-E304656 1 568 +;Parent=SGN-E304656_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	16946	17544	1.000	-	0	ID=SGN-E248580_alignment_2;Target=SGN-E248580 1 599 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	16946	17544	1.000	-	0	ID=GTH_SGN_E_tom_match_part_31;Target=SGN-E248580 1 599 +;Parent=SGN-E248580_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	17016	17619	0.998	-	0	ID=SGN-E205330_alignment_2;Target=SGN-E205330 1 604 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	17016	17619	0.998	-	0	ID=GTH_SGN_E_tom_match_part_32;Target=SGN-E205330 1 604 +;Parent=SGN-E205330_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	17016	17529	1.000	-	0	ID=SGN-E269573_alignment_2;Target=SGN-E269573 1 514 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	17016	17529	1.000	-	0	ID=GTH_SGN_E_tom_match_part_33;Target=SGN-E269573 1 514 +;Parent=SGN-E269573_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	17041	17606	1.000	-	0	ID=SGN-E330646_alignment_2;Target=SGN-E330646 1 566 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	17041	17606	1.000	-	0	ID=GTH_SGN_E_tom_match_part_34;Target=SGN-E330646 1 566 +;Parent=SGN-E330646_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	17045	17545	1.000	-	0	ID=SGN-E214288_alignment_2;Target=SGN-E214288 1 501 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	17045	17545	1.000	-	0	ID=GTH_SGN_E_tom_match_part_35;Target=SGN-E214288 1 501 +;Parent=SGN-E214288_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	17061	17639	0.993	-	0	ID=SGN-E271538_alignment_2;Target=SGN-E271538 1 579 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	17061	17639	0.993	-	0	ID=GTH_SGN_E_tom_match_part_36;Target=SGN-E271538 1 579 +;Parent=SGN-E271538_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	17207	17546	0.991	-	0	ID=SGN-E330949_alignment_2;Target=SGN-E330949 1 340 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	17207	17546	0.991	-	0	ID=GTH_SGN_E_tom_match_part_37;Target=SGN-E330949 1 340 +;Parent=SGN-E330949_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match	17244	17691	0.980	+	0	ID=SGN-E287918_alignment_2;Target=SGN-E287918 1 448 +
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	match_part	17244	17691	0.980	+	0	ID=GTH_SGN_E_tom_match_part_38;Target=SGN-E287918 1 448 +;Parent=SGN-E287918_alignment_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	gene	875	2916	.	+	0	ID=GTH_SGN_E_tom_gene_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	mRNA	893	2196	.	+	0	ID=GTH_SGN_E_tom_gene_1_AGS_1;Parent=GTH_SGN_E_tom_gene_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	exon	893	2012	0.948	+	0	ID=GTH_SGN_E_tom_exon_1;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	exon	2085	2196	0.979	+	0	ID=GTH_SGN_E_tom_exon_2;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	mRNA	2208	2916	.	+	0	ID=GTH_SGN_E_tom_gene_1_AGS_2;Parent=GTH_SGN_E_tom_gene_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	exon	2208	2916	0.976	+	0	ID=GTH_SGN_E_tom_exon_3;Parent=GTH_SGN_E_tom_gene_1_AGS_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	mRNA	875	2828	.	+	0	ID=GTH_SGN_E_tom_gene_1_AGS_3;Parent=GTH_SGN_E_tom_gene_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	exon	875	1070	0.888	+	0	ID=GTH_SGN_E_tom_exon_4;Parent=GTH_SGN_E_tom_gene_1_AGS_3
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	exon	1499	2068	0.911	+	0	ID=GTH_SGN_E_tom_exon_5;Parent=GTH_SGN_E_tom_gene_1_AGS_3
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	exon	2811	2828	0.556	+	0	ID=GTH_SGN_E_tom_exon_6;Parent=GTH_SGN_E_tom_gene_1_AGS_3
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	gene	6495	6722	.	+	0	ID=GTH_SGN_E_tom_gene_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	mRNA	6495	6722	.	+	0	ID=GTH_SGN_E_tom_gene_2_AGS_1;Parent=GTH_SGN_E_tom_gene_2
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	exon	6495	6722	0.974	+	0	ID=GTH_SGN_E_tom_exon_7;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	gene	16199	17639	.	-	0	ID=GTH_SGN_E_tom_gene_3
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	mRNA	16199	17639	.	-	0	ID=GTH_SGN_E_tom_gene_3_AGS_1;Parent=GTH_SGN_E_tom_gene_3
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	exon	16199	17639	0.998	-	0	ID=GTH_SGN_E_tom_exon_8;Parent=GTH_SGN_E_tom_gene_3_AGS_1
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	gene	17244	17691	.	+	0	ID=GTH_SGN_E_tom_gene_4
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	mRNA	17244	17691	.	+	0	ID=GTH_SGN_E_tom_gene_4_AGS_1;Parent=GTH_SGN_E_tom_gene_4
C04HBa0053A08.1	GenomeThreader_SGN_E_tomato	exon	17244	17691	0.980	+	0	ID=GTH_SGN_E_tom_exon_9;Parent=GTH_SGN_E_tom_gene_4_AGS_1
C04HBa0053A08.1	AUGUSTUS_tom_cdna	gene	16143	17600	1	-	.	ID=g1_1
C04HBa0053A08.1	AUGUSTUS_tom_cdna	transcript	16143	17600	.	-	.	ID=g1.t1_1;Parent=g1_1
C04HBa0053A08.1	AUGUSTUS_tom_cdna	stop_codon	16143	16145	.	-	0	Parent=g1.t1_1
C04HBa0053A08.1	AUGUSTUS_tom_cdna	CDS	16143	17600	.	-	0	ID=g1.t1.cds_1;Parent=g1.t1_1
C04HBa0053A08.1	AUGUSTUS_tom_cdna	start_codon	17598	17600	.	-	0	Parent=g1.t1_1
C04HBa0053A08.1	AUGUSTUS_ab_initio	gene	13871	17201	1	-	.	ID=g1_2
C04HBa0053A08.1	AUGUSTUS_ab_initio	transcript	13871	17201	.	-	.	ID=g1.t1_2;Parent=g1_2
C04HBa0053A08.1	AUGUSTUS_ab_initio	stop_codon	13871	13873	.	-	0	Parent=g1.t1_2
C04HBa0053A08.1	AUGUSTUS_ab_initio	CDS	13871	13884	.	-	2	ID=g1.t1.cds_2;Parent=g1.t1_2
C04HBa0053A08.1	AUGUSTUS_ab_initio	CDS	16334	17201	.	-	0	ID=g1.t1.cds_3;Parent=g1.t1_2
C04HBa0053A08.1	AUGUSTUS_ab_initio	start_codon	17199	17201	.	-	0	Parent=g1.t1_2
C04HBa0053A08.1	AUGUSTUS_tom_ugs	gene	13871	17201	1	-	.	ID=g1_3
C04HBa0053A08.1	AUGUSTUS_tom_ugs	transcript	13871	17201	.	-	.	ID=g1.t1_3;Parent=g1_3
C04HBa0053A08.1	AUGUSTUS_tom_ugs	stop_codon	13871	13873	.	-	0	Parent=g1.t1_3
C04HBa0053A08.1	AUGUSTUS_tom_ugs	CDS	13871	13884	.	-	2	ID=g1.t1.cds_4;Parent=g1.t1_3
C04HBa0053A08.1	AUGUSTUS_tom_ugs	CDS	16334	17201	.	-	0	ID=g1.t1.cds_5;Parent=g1.t1_3
C04HBa0053A08.1	AUGUSTUS_tom_ugs	start_codon	17199	17201	.	-	0	Parent=g1.t1_3
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	match	875	2828	0.905	+	0	ID=SGN-U333723_alignment_1;Target=SGN-U333723 1 757 -
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	match_part	875	1070	0.888	+	0	ID=GTH_SGN_U_tom_match_part_1;Target=SGN-U333723 1 187 -;Parent=SGN-U333723_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	match_part	1499	2068	0.911	+	0	ID=GTH_SGN_U_tom_match_part_2;Target=SGN-U333723 188 739 -;Parent=SGN-U333723_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	match_part	2811	2828	0.556	+	0	ID=GTH_SGN_U_tom_match_part_3;Target=SGN-U333723 740 757 -;Parent=SGN-U333723_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	match	893	2196	0.960	+	0	ID=SGN-U312594_alignment_1;Target=SGN-U312594 1 1222 +
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	match_part	893	2012	0.959	+	0	ID=GTH_SGN_U_tom_match_part_4;Target=SGN-U312594 1 1110 +;Parent=SGN-U312594_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	match_part	2085	2196	0.973	+	0	ID=GTH_SGN_U_tom_match_part_5;Target=SGN-U312594 1111 1222 +;Parent=SGN-U312594_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	match	2208	2916	0.973	+	0	ID=SGN-U324842_alignment_1;Target=SGN-U324842 1 709 +
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	match_part	2208	2916	0.973	+	0	ID=GTH_SGN_U_tom_match_part_6;Target=SGN-U324842 1 709 +;Parent=SGN-U324842_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	match	16199	17691	0.999	-	0	ID=SGN-U320469_alignment_1;Target=SGN-U320469 1 1492 +
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	match_part	16199	17691	0.999	-	0	ID=GTH_SGN_U_tom_match_part_7;Target=SGN-U320469 1 1492 +;Parent=SGN-U320469_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	gene	875	2916	.	+	0	ID=GTH_SGN_U_tom_gene_1
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	mRNA	875	2828	.	+	0	ID=GTH_SGN_U_tom_gene_1_AGS_1;Parent=GTH_SGN_U_tom_gene_1
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	exon	875	1070	0.888	+	0	ID=GTH_SGN_U_tom_exon_1;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	exon	1499	2068	0.911	+	0	ID=GTH_SGN_U_tom_exon_2;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	exon	2811	2828	0.556	+	0	ID=GTH_SGN_U_tom_exon_3;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	mRNA	2208	2916	.	+	0	ID=GTH_SGN_U_tom_gene_1_AGS_2;Parent=GTH_SGN_U_tom_gene_1
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	exon	2208	2916	0.973	+	0	ID=GTH_SGN_U_tom_exon_4;Parent=GTH_SGN_U_tom_gene_1_AGS_2
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	mRNA	893	2196	.	+	0	ID=GTH_SGN_U_tom_gene_1_AGS_3;Parent=GTH_SGN_U_tom_gene_1
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	exon	893	2012	0.959	+	0	ID=GTH_SGN_U_tom_exon_5;Parent=GTH_SGN_U_tom_gene_1_AGS_3
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	exon	2085	2196	0.973	+	0	ID=GTH_SGN_U_tom_exon_6;Parent=GTH_SGN_U_tom_gene_1_AGS_3
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	gene	16199	17691	.	-	0	ID=GTH_SGN_U_tom_gene_2
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	mRNA	16199	17691	.	-	0	ID=GTH_SGN_U_tom_gene_2_AGS_1;Parent=GTH_SGN_U_tom_gene_2
C04HBa0053A08.1	GenomeThreader_SGN_U_tomato	exon	16199	17691	0.999	-	0	ID=GTH_SGN_U_tom_exon_7;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0053A08.1	GenomeThreader_SGN_markers	match	16947	17620	0.999	-	0	ID=SGN-M812_alignment_1;Target=SGN-M812 1 674 +
C04HBa0053A08.1	GenomeThreader_SGN_markers	match_part	16947	17620	0.999	-	0	ID=GTH_SGN_markers_match_part_1;Target=SGN-M812 1 674 +;Parent=SGN-M812_alignment_1
C04HBa0053A08.1	GenomeThreader_SGN_markers	match	17016	17619	0.998	-	0	ID=SGN-M812-2_alignment_1;Target=SGN-M812-2 1 604 +
C04HBa0053A08.1	GenomeThreader_SGN_markers	match_part	17016	17619	0.998	-	0	ID=GTH_SGN_markers_match_part_2;Target=SGN-M812-2 1 604 +;Parent=SGN-M812-2_alignment_1
C04HBa0053A08.1	AUGUSTUS_tom_pot_cdna	gene	16143	17600	1	-	.	ID=g1_4
C04HBa0053A08.1	AUGUSTUS_tom_pot_cdna	transcript	16143	17600	.	-	.	ID=g1.t1_4;Parent=g1_4
C04HBa0053A08.1	AUGUSTUS_tom_pot_cdna	stop_codon	16143	16145	.	-	0	Parent=g1.t1_4
C04HBa0053A08.1	AUGUSTUS_tom_pot_cdna	CDS	16143	17600	.	-	0	ID=g1.t1.cds_6;Parent=g1.t1_4
C04HBa0053A08.1	AUGUSTUS_tom_pot_cdna	start_codon	17598	17600	.	-	0	Parent=g1.t1_4
C04HBa0053A08.1	BLAST_ath_pep	match	1657	1923	103	+	0	ID=AT2G10090.1_fwd_alignment_1;blast_gaps=0;Target=AT2G10090.1 5 93 +;blast_percent_identity=51.69;blast_mismatches=43;blast_evalue=5e-26
C04HBa0053A08.1	BLAST_ath_pep	match	1922	2002	37.7	+	0	ID=AT2G10090.1_fwd_alignment_2;blast_gaps=0;Target=AT2G10090.1 93 119 +;blast_percent_identity=51.85;blast_mismatches=13;blast_evalue=5e-26
C04HBa0053A08.1	BLAST_ath_pep	match	16146	17390	282	-	0	ID=AT3G57400.1_fwd_alignment_1;blast_gaps=15;Target=AT3G57400.1 48 474 +;blast_percent_identity=48.31;blast_mismatches=201;blast_evalue=7e-75
C04HBa0053A08.1	BLAST_ath_pep	match	3900	5360	301	+	0	ID=AT4G23160.1_fwd_alignment_1;blast_gaps=6;Target=AT4G23160.1 67 553 +;blast_percent_identity=35.09;blast_mismatches=314;blast_evalue=2e-80
C04HBa0053A08.1	BLAST_ath_pep	match	16338	17396	242	-	0	ID=AT5G52500.1_fwd_alignment_1;blast_gaps=7;Target=AT5G52500.1 28 354 +;blast_percent_identity=45.83;blast_mismatches=188;blast_evalue=1e-62
C04HBa0053A08.1	BLAST_ath_pep	match	4536	5204	117	+	0	ID=ATMG00810.1_fwd_alignment_1;blast_gaps=2;Target=ATMG00810.1 3 225 +;blast_percent_identity=30.80;blast_mismatches=154;blast_evalue=3e-25