##gff-version 3
##sequence-region C04HBa0114G11.1 1 28696
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	7780	8420	0.998	-	0	ID=SGN-E266423_alignment_1;Target=SGN-E266423 1 492 -
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	7945	8420	0.998	-	0	ID=GTH_SGN_E_tom_potato_match_part_1;Target=SGN-E266423 1 476 -;Parent=SGN-E266423_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	7780	7795	0.500	-	0	ID=GTH_SGN_E_tom_potato_match_part_2;Target=SGN-E266423 477 492 -;Parent=SGN-E266423_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	7785	8511	0.995	-	0	ID=SGN-E377683_alignment_1;Target=SGN-E377683 1 586 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	7938	8511	0.995	-	0	ID=GTH_SGN_E_tom_potato_match_part_3;Target=SGN-E377683 1 575 +;Parent=SGN-E377683_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	7785	7795	0.545	-	0	ID=GTH_SGN_E_tom_potato_match_part_4;Target=SGN-E377683 576 586 +;Parent=SGN-E377683_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	7903	8517	0.912	-	0	ID=SGN-E428945_alignment_1;Target=SGN-E428945 1 615 -
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	7903	8517	0.912	-	0	ID=GTH_SGN_E_tom_potato_match_part_5;Target=SGN-E428945 1 615 -;Parent=SGN-E428945_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	7931	8607	0.904	+	0	ID=SGN-E457409_alignment_1;Target=SGN-E457409 1 677 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	7931	8607	0.904	+	0	ID=GTH_SGN_E_tom_potato_match_part_6;Target=SGN-E457409 1 677 +;Parent=SGN-E457409_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	7931	8559	0.906	+	0	ID=SGN-E429518_alignment_1;Target=SGN-E429518 1 629 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	7931	8559	0.906	+	0	ID=GTH_SGN_E_tom_potato_match_part_7;Target=SGN-E429518 1 629 +;Parent=SGN-E429518_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	7938	8686	0.919	+	0	ID=SGN-E416239_alignment_1;Target=SGN-E416239 14 762 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	7938	8686	0.919	+	0	ID=GTH_SGN_E_tom_potato_match_part_8;Target=SGN-E416239 14 762 +;Parent=SGN-E416239_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	8287	9375	1.000	-	0	ID=SGN-E238482_alignment_1;Target=SGN-E238482 1 529 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	9316	9375	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_9;Target=SGN-E238482 1 60 +;Parent=SGN-E238482_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	8775	8845	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_10;Target=SGN-E238482 61 131 +;Parent=SGN-E238482_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	8287	8684	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_11;Target=SGN-E238482 132 529 +;Parent=SGN-E238482_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	8395	9711	0.993	-	0	ID=SGN-E233038_alignment_1;Target=SGN-E233038 1 587 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	9648	9711	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_12;Target=SGN-E233038 1 64 +;Parent=SGN-E233038_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	9491	9558	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_13;Target=SGN-E233038 65 132 +;Parent=SGN-E233038_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	9316	9409	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_14;Target=SGN-E233038 133 226 +;Parent=SGN-E233038_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	8775	8845	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_15;Target=SGN-E233038 227 297 +;Parent=SGN-E233038_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	8395	8684	0.986	-	0	ID=GTH_SGN_E_tom_potato_match_part_16;Target=SGN-E233038 298 587 +;Parent=SGN-E233038_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	8464	9711	1.000	-	0	ID=SGN-E235703_alignment_1;Target=SGN-E235703 1 518 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	9648	9711	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_17;Target=SGN-E235703 1 64 +;Parent=SGN-E235703_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	9491	9558	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_18;Target=SGN-E235703 65 132 +;Parent=SGN-E235703_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	9316	9409	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_19;Target=SGN-E235703 133 226 +;Parent=SGN-E235703_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	8775	8845	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_20;Target=SGN-E235703 227 297 +;Parent=SGN-E235703_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	8464	8684	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_21;Target=SGN-E235703 298 518 +;Parent=SGN-E235703_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	8485	9980	0.948	-	0	ID=SGN-E429519_alignment_1;Target=SGN-E429519 1 614 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	9866	9980	0.878	-	0	ID=GTH_SGN_E_tom_potato_match_part_22;Target=SGN-E429519 1 114 +;Parent=SGN-E429519_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	9648	9714	0.970	-	0	ID=GTH_SGN_E_tom_potato_match_part_23;Target=SGN-E429519 115 181 +;Parent=SGN-E429519_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	9491	9558	0.971	-	0	ID=GTH_SGN_E_tom_potato_match_part_24;Target=SGN-E429519 182 249 +;Parent=SGN-E429519_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	9316	9409	0.968	-	0	ID=GTH_SGN_E_tom_potato_match_part_25;Target=SGN-E429519 250 343 +;Parent=SGN-E429519_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	8775	8845	0.972	-	0	ID=GTH_SGN_E_tom_potato_match_part_26;Target=SGN-E429519 344 414 +;Parent=SGN-E429519_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	8485	8684	0.955	-	0	ID=GTH_SGN_E_tom_potato_match_part_27;Target=SGN-E429519 415 614 +;Parent=SGN-E429519_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	8490	9711	0.992	-	0	ID=SGN-E377684_alignment_1;Target=SGN-E377684 1 492 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	9648	9711	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_28;Target=SGN-E377684 1 64 +;Parent=SGN-E377684_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	9491	9558	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_29;Target=SGN-E377684 65 132 +;Parent=SGN-E377684_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	9316	9409	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_30;Target=SGN-E377684 133 226 +;Parent=SGN-E377684_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	8775	8845	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_31;Target=SGN-E377684 227 297 +;Parent=SGN-E377684_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	8490	8684	0.979	-	0	ID=GTH_SGN_E_tom_potato_match_part_32;Target=SGN-E377684 298 492 +;Parent=SGN-E377684_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	8532	9945	1.000	-	0	ID=SGN-E241392_alignment_1;Target=SGN-E241392 1 536 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	9866	9945	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_33;Target=SGN-E241392 1 80 +;Parent=SGN-E241392_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	9648	9714	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_34;Target=SGN-E241392 81 147 +;Parent=SGN-E241392_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	9491	9558	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_35;Target=SGN-E241392 148 215 +;Parent=SGN-E241392_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	9316	9412	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_36;Target=SGN-E241392 216 312 +;Parent=SGN-E241392_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	8775	8845	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_37;Target=SGN-E241392 313 383 +;Parent=SGN-E241392_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	8532	8684	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_38;Target=SGN-E241392 384 536 +;Parent=SGN-E241392_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	9389	9945	1.000	-	0	ID=SGN-E239957_alignment_1;Target=SGN-E239957 1 239 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	9866	9945	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_39;Target=SGN-E239957 1 80 +;Parent=SGN-E239957_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	9648	9714	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_40;Target=SGN-E239957 81 147 +;Parent=SGN-E239957_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	9491	9558	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_41;Target=SGN-E239957 148 215 +;Parent=SGN-E239957_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	9389	9412	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_42;Target=SGN-E239957 216 239 +;Parent=SGN-E239957_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	10168	16776	1.000	-	0	ID=SGN-E257906_alignment_1;Target=SGN-E257906 1 532 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	16752	16776	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_43;Target=SGN-E257906 1 25 +;Parent=SGN-E257906_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	15764	15875	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_44;Target=SGN-E257906 26 137 +;Parent=SGN-E257906_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	14351	14461	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_45;Target=SGN-E257906 138 248 +;Parent=SGN-E257906_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	13391	13467	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_46;Target=SGN-E257906 249 325 +;Parent=SGN-E257906_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	11966	12032	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_47;Target=SGN-E257906 326 392 +;Parent=SGN-E257906_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	11542	11607	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_48;Target=SGN-E257906 393 458 +;Parent=SGN-E257906_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	10168	10241	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_49;Target=SGN-E257906 459 532 +;Parent=SGN-E257906_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	14373	18985	1.000	-	0	ID=SGN-E273124_alignment_1;Target=SGN-E273124 1 595 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	18912	18985	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_50;Target=SGN-E273124 1 74 +;Parent=SGN-E273124_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	17575	17670	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_51;Target=SGN-E273124 75 170 +;Parent=SGN-E273124_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	17169	17221	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_52;Target=SGN-E273124 171 223 +;Parent=SGN-E273124_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	16917	17013	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_53;Target=SGN-E273124 224 320 +;Parent=SGN-E273124_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	16752	16825	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_54;Target=SGN-E273124 321 394 +;Parent=SGN-E273124_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	15764	15875	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_55;Target=SGN-E273124 395 506 +;Parent=SGN-E273124_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	14373	14461	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_56;Target=SGN-E273124 507 595 +;Parent=SGN-E273124_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	14428	18960	0.956	-	0	ID=SGN-E441168_alignment_1;Target=SGN-E441168 1 515 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	18912	18960	0.918	-	0	ID=GTH_SGN_E_tom_potato_match_part_57;Target=SGN-E441168 1 49 +;Parent=SGN-E441168_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	17575	17670	0.927	-	0	ID=GTH_SGN_E_tom_potato_match_part_58;Target=SGN-E441168 50 145 +;Parent=SGN-E441168_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	17169	17221	0.981	-	0	ID=GTH_SGN_E_tom_potato_match_part_59;Target=SGN-E441168 146 198 +;Parent=SGN-E441168_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	16917	17013	0.948	-	0	ID=GTH_SGN_E_tom_potato_match_part_60;Target=SGN-E441168 199 295 +;Parent=SGN-E441168_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	16752	16825	0.946	-	0	ID=GTH_SGN_E_tom_potato_match_part_61;Target=SGN-E441168 296 369 +;Parent=SGN-E441168_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	15764	15875	0.982	-	0	ID=GTH_SGN_E_tom_potato_match_part_62;Target=SGN-E441168 370 481 +;Parent=SGN-E441168_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	14428	14461	0.912	-	0	ID=GTH_SGN_E_tom_potato_match_part_63;Target=SGN-E441168 482 515 +;Parent=SGN-E441168_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	16752	20111	0.998	-	0	ID=SGN-E252501_alignment_1;Target=SGN-E252501 1 553 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	20089	20111	0.957	-	0	ID=GTH_SGN_E_tom_potato_match_part_64;Target=SGN-E252501 1 23 +;Parent=SGN-E252501_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	18912	19121	0.995	-	0	ID=GTH_SGN_E_tom_potato_match_part_65;Target=SGN-E252501 24 233 +;Parent=SGN-E252501_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	17575	17670	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_66;Target=SGN-E252501 234 329 +;Parent=SGN-E252501_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	17169	17221	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_67;Target=SGN-E252501 330 382 +;Parent=SGN-E252501_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	16917	17013	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_68;Target=SGN-E252501 383 479 +;Parent=SGN-E252501_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	16752	16825	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_69;Target=SGN-E252501 480 553 +;Parent=SGN-E252501_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	16932	19121	1.000	-	0	ID=SGN-E245103_alignment_1;Target=SGN-E245103 8 448 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	18912	19121	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_70;Target=SGN-E245103 8 217 +;Parent=SGN-E245103_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	17575	17670	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_71;Target=SGN-E245103 218 313 +;Parent=SGN-E245103_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	17169	17221	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_72;Target=SGN-E245103 314 366 +;Parent=SGN-E245103_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	16932	17013	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_73;Target=SGN-E245103 367 448 +;Parent=SGN-E245103_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	16939	20325	0.940	-	0	ID=SGN-E487533_alignment_1;Target=SGN-E487533 57 727 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	20089	20325	0.945	-	0	ID=GTH_SGN_E_tom_potato_match_part_74;Target=SGN-E487533 57 292 +;Parent=SGN-E487533_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	18912	19121	0.962	-	0	ID=GTH_SGN_E_tom_potato_match_part_75;Target=SGN-E487533 293 503 +;Parent=SGN-E487533_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	17575	17670	0.948	-	0	ID=GTH_SGN_E_tom_potato_match_part_76;Target=SGN-E487533 504 599 +;Parent=SGN-E487533_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	17169	17221	0.887	-	0	ID=GTH_SGN_E_tom_potato_match_part_77;Target=SGN-E487533 600 652 +;Parent=SGN-E487533_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	16939	17013	0.893	-	0	ID=GTH_SGN_E_tom_potato_match_part_78;Target=SGN-E487533 653 727 +;Parent=SGN-E487533_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	16962	20409	0.925	-	0	ID=SGN-E416238_alignment_1;Target=SGN-E416238 1 717 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	20089	20409	0.885	-	0	ID=GTH_SGN_E_tom_potato_match_part_79;Target=SGN-E416238 1 309 +;Parent=SGN-E416238_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	18912	19121	0.971	-	0	ID=GTH_SGN_E_tom_potato_match_part_80;Target=SGN-E416238 310 519 +;Parent=SGN-E416238_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	17575	17670	0.948	-	0	ID=GTH_SGN_E_tom_potato_match_part_81;Target=SGN-E416238 520 615 +;Parent=SGN-E416238_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	17169	17221	0.943	-	0	ID=GTH_SGN_E_tom_potato_match_part_82;Target=SGN-E416238 616 665 +;Parent=SGN-E416238_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	16962	17013	0.923	-	0	ID=GTH_SGN_E_tom_potato_match_part_83;Target=SGN-E416238 666 717 +;Parent=SGN-E416238_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	17005	20394	1.000	-	0	ID=SGN-E325762_alignment_1;Target=SGN-E325762 1 674 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	20089	20394	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_84;Target=SGN-E325762 1 306 +;Parent=SGN-E325762_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	18912	19121	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_85;Target=SGN-E325762 307 516 +;Parent=SGN-E325762_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	17575	17670	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_86;Target=SGN-E325762 517 612 +;Parent=SGN-E325762_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	17169	17221	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_87;Target=SGN-E325762 613 665 +;Parent=SGN-E325762_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	17005	17013	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_88;Target=SGN-E325762 666 674 +;Parent=SGN-E325762_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	17283	20110	0.901	-	0	ID=SGN-E428944_alignment_1;Target=SGN-E428944 1 637 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	20089	20110	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_89;Target=SGN-E428944 1 22 +;Parent=SGN-E428944_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	18912	19121	0.986	-	0	ID=GTH_SGN_E_tom_potato_match_part_90;Target=SGN-E428944 23 232 +;Parent=SGN-E428944_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	17283	17670	0.856	-	0	ID=GTH_SGN_E_tom_potato_match_part_91;Target=SGN-E428944 233 637 +;Parent=SGN-E428944_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	17386	20110	0.905	-	0	ID=SGN-E481479_alignment_1;Target=SGN-E481479 1 532 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	20089	20110	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_92;Target=SGN-E481479 1 22 +;Parent=SGN-E481479_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	18912	19121	0.986	-	0	ID=GTH_SGN_E_tom_potato_match_part_93;Target=SGN-E481479 23 232 +;Parent=SGN-E481479_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	17386	17670	0.846	-	0	ID=GTH_SGN_E_tom_potato_match_part_94;Target=SGN-E481479 233 532 +;Parent=SGN-E481479_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	17615	20257	1.000	-	0	ID=SGN-E338484_alignment_1;Target=SGN-E338484 1 435 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	20089	20257	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_95;Target=SGN-E338484 1 169 +;Parent=SGN-E338484_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	18912	19121	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_96;Target=SGN-E338484 170 379 +;Parent=SGN-E338484_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	17615	17670	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_97;Target=SGN-E338484 380 435 +;Parent=SGN-E338484_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	19058	20379	0.989	-	0	ID=SGN-E330105_alignment_1;Target=SGN-E330105 1 355 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	20089	20379	0.997	-	0	ID=GTH_SGN_E_tom_potato_match_part_98;Target=SGN-E330105 1 291 +;Parent=SGN-E330105_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	19058	19121	0.953	-	0	ID=GTH_SGN_E_tom_potato_match_part_99;Target=SGN-E330105 292 355 +;Parent=SGN-E330105_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	20091	20379	1.000	-	0	ID=SGN-E330104_alignment_1;Target=SGN-E330104 1 289 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	20091	20379	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_100;Target=SGN-E330104 1 289 +;Parent=SGN-E330104_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match	20147	20391	1.000	-	0	ID=SGN-E305372_alignment_1;Target=SGN-E305372 1 245 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	match_part	20147	20391	1.000	-	0	ID=GTH_SGN_E_tom_potato_match_part_101;Target=SGN-E305372 1 245 +;Parent=SGN-E305372_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	gene	7780	9980	.	-	0	ID=GTH_SGN_E_tom_potato_gene_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	mRNA	7903	9980	.	-	0	ID=GTH_SGN_E_tom_potato_gene_1_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	9866	9980	0.878	-	0	ID=GTH_SGN_E_tom_potato_exon_1;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	9648	9714	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_2;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	9491	9558	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_3;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	9316	9409	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_4;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	8775	8845	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_5;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	7903	8684	0.912	-	0	ID=GTH_SGN_E_tom_potato_exon_6;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	mRNA	7780	9980	.	-	0	ID=GTH_SGN_E_tom_potato_gene_1_AGS_2;Parent=GTH_SGN_E_tom_potato_gene_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	9866	9980	0.878	-	0	ID=GTH_SGN_E_tom_potato_exon_7;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	9648	9714	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_8;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	9491	9558	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_9;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	9316	9409	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_10;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	8775	8845	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_11;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	7945	8684	0.998	-	0	ID=GTH_SGN_E_tom_potato_exon_12;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	7780	7795	0.500	-	0	ID=GTH_SGN_E_tom_potato_exon_13;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	mRNA	7785	9980	.	-	0	ID=GTH_SGN_E_tom_potato_gene_1_AGS_3;Parent=GTH_SGN_E_tom_potato_gene_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	9866	9980	0.878	-	0	ID=GTH_SGN_E_tom_potato_exon_14;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_3
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	9648	9714	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_15;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_3
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	9491	9558	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_16;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_3
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	9316	9409	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_17;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_3
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	8775	8845	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_18;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_3
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	7938	8684	0.995	-	0	ID=GTH_SGN_E_tom_potato_exon_19;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_3
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	7785	7795	0.545	-	0	ID=GTH_SGN_E_tom_potato_exon_20;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_3
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	mRNA	7903	9945	.	-	0	ID=GTH_SGN_E_tom_potato_gene_1_AGS_4;Parent=GTH_SGN_E_tom_potato_gene_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	9866	9945	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_21;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_4
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	9648	9714	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_22;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_4
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	9491	9558	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_23;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_4
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	9316	9412	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_24;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_4
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	8775	8845	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_25;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_4
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	7903	8684	0.912	-	0	ID=GTH_SGN_E_tom_potato_exon_26;Parent=GTH_SGN_E_tom_potato_gene_1_AGS_4
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	gene	7931	8686	.	+	0	ID=GTH_SGN_E_tom_potato_gene_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	mRNA	7931	8686	.	+	0	ID=GTH_SGN_E_tom_potato_gene_2_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	7931	8686	0.919	+	0	ID=GTH_SGN_E_tom_potato_exon_27;Parent=GTH_SGN_E_tom_potato_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	gene	10168	20409	.	-	0	ID=GTH_SGN_E_tom_potato_gene_3
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	mRNA	10168	20409	.	-	0	ID=GTH_SGN_E_tom_potato_gene_3_AGS_1;Parent=GTH_SGN_E_tom_potato_gene_3
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	20089	20409	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_28;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	18912	19121	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_29;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	17575	17670	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_30;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	17169	17221	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_31;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	16917	17013	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_32;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	16752	16825	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_33;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	15764	15875	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_34;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	14351	14461	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_35;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	13391	13467	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_36;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	11966	12032	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_37;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	11542	11607	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_38;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	10168	10241	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_39;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	mRNA	17283	20391	.	-	0	ID=GTH_SGN_E_tom_potato_gene_3_AGS_2;Parent=GTH_SGN_E_tom_potato_gene_3
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	20089	20391	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_40;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	18912	19121	1.000	-	0	ID=GTH_SGN_E_tom_potato_exon_41;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato_potato	exon	17283	17670	0.856	-	0	ID=GTH_SGN_E_tom_potato_exon_42;Parent=GTH_SGN_E_tom_potato_gene_3_AGS_2
C04HBa0114G11.1	RepeatMasker	nucleotide_motif	995	1222	1231	+	0	ID=SONATA2_alignment_1;Target=SONATA2 8 238 +
C04HBa0114G11.1	RepeatMasker	nucleotide_motif	2343	2650	2289	+	0	ID=Unknown00034_alignment_1;Target=Unknown00034 3705 4017 +
C04HBa0114G11.1	RepeatMasker	nucleotide_motif	7703	7771	370	-	0	ID=TS_alignment_1;Target=TS 62 128 -
C04HBa0114G11.1	RepeatMasker	nucleotide_motif	11229	11240	381	-	0	ID=Copia00151_alignment_1;Target=Copia00151 10116 10172 -
C04HBa0114G11.1	RepeatMasker	nucleotide_motif	11241	11344	465	-	0	ID=TS_alignment_2;Target=TS 58 159 -
C04HBa0114G11.1	RepeatMasker	nucleotide_motif	11345	11356	381	-	0	ID=Copia00151_alignment_2;Target=Copia00151 10059 10115 -
C04HBa0114G11.1	RepeatMasker	nucleotide_motif	21108	23551	11424	-	0	ID=Gypsy00049_alignment_1;Target=Gypsy00049 5118 7657 -
C04HBa0114G11.1	RepeatMasker	nucleotide_motif	23546	24603	5477	-	0	ID=Unknown00019_alignment_1;Target=Unknown00019 3244 4304 -
C04HBa0114G11.1	RepeatMasker	nucleotide_motif	24740	24821	421	+	0	ID=HELITRON7_OS_alignment_1;Target=HELITRON7_OS 1598 1679 +
C04HBa0114G11.1	RepeatMasker	nucleotide_motif	24757	24843	307	-	0	ID=HELMET3_alignment_1;Target=HELMET3 3685 3772 -
C04HBa0114G11.1	RepeatMasker	nucleotide_motif	25158	25300	225	-	0	ID=Copia00149_alignment_1;Target=Copia00149 5089 5229 -
C04HBa0114G11.1	RepeatMasker	nucleotide_motif	28120	28206	306	+	0	ID=HELITRON7_OS_alignment_2;Target=HELITRON7_OS 1609 3772 +
C04HBa0114G11.1	RepeatMasker	nucleotide_motif	28129	28224	297	-	0	ID=Gypsy00046_alignment_1;Target=Gypsy00046 4079 4169 -
C04HBa0114G11.1	BLAST_tomato_bacs	match	26833	27892	2018	+	0	ID=C04HBa0050I18.1_fwd_alignment_1;blast_gaps=0;Target=clone-C04HBa0050I18.1 137 1196 +;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0114G11.1	BLAST_tomato_bac_ends	match	19134	19844	1312	+	0	ID=LE_HBa0016J13_SP6_79176_fwd_alignment_1;blast_gaps=1;Target=LE_HBa0016J13_SP6_79176 1 712 +;blast_percent_identity=99.86;blast_mismatches=0;blast_evalue=0.0
C04HBa0114G11.1	BLAST_tomato_bac_ends	match	26833	27486	1255	+	0	ID=LE_HBa0050I18_SP6_10786_fwd_alignment_1;blast_gaps=0;Target=LE_HBa0050I18_SP6_10786 57 710 +;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0114G11.1	BLAST_tomato_bac_ends	match	1	203	379	+	0	ID=LE_HBa0107F03_T7_121841_fwd_alignment_1;blast_gaps=0;Target=LE_HBa0107F03_T7_121841 358 560 +;blast_percent_identity=98.52;blast_mismatches=3;blast_evalue=5e-102
C04HBa0114G11.1	BLAST_tomato_bac_ends	match	47	552	963	+	0	ID=LE_HBa0114G11_SP6_38324_fwd_alignment_1;blast_gaps=0;Target=LE_HBa0114G11_SP6_38324 1 506 +;blast_percent_identity=99.01;blast_mismatches=5;blast_evalue=0.0
C04HBa0114G11.1	BLAST_tomato_bac_ends	match	19099	19793	1287	+	0	ID=LE_HBa0122M01_SP6_57792_fwd_alignment_1;blast_gaps=0;Target=LE_HBa0122M01_SP6_57792 7 701 +;blast_percent_identity=99.86;blast_mismatches=1;blast_evalue=0.0
C04HBa0114G11.1	BLAST_tomato_bac_ends	match	26833	27321	928	+	0	ID=LE_HBa0151H14_SP6_123052_fwd_alignment_1;blast_gaps=0;Target=LE_HBa0151H14_SP6_123052 117 605 +;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0114G11.1	BLAST_tomato_bac_ends	match	1	330	654	+	0	ID=LE_HBa0231N24_T7_406777_fwd_alignment_1;blast_gaps=0;Target=LE_HBa0231N24_T7_406777 371 700 +;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0114G11.1	BLAST_tomato_bac_ends	match	2493	2650	289	+	0	ID=SL_EcoRI0057N01_SP6_257028_fwd_alignment_1;blast_gaps=0;Target=SL_EcoRI0057N01_SP6_257028 248 405 +;blast_percent_identity=98.10;blast_mismatches=3;blast_evalue=4e-75
C04HBa0114G11.1	BLAST_tomato_bac_ends	match	14025	14601	1055	+	0	ID=SL_FOS0210F19_pIBR_561421_fwd_alignment_1;blast_gaps=0;Target=SL_FOS0210F19_pIBR_561421 3 579 +;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0114G11.1	BLAST_tomato_bac_ends	match	14363	14824	916	+	0	ID=SL_MboI0015F19_T7_264827_fwd_alignment_1;blast_gaps=0;Target=SL_MboI0015F19_T7_264827 1 462 +;blast_percent_identity=100.00;blast_mismatches=0;blast_evalue=0.0
C04HBa0114G11.1	BLAST_tomato_bac_ends	match	15051	15463	684	+	0	ID=SL_MboI0052A02_SP6_157381_fwd_alignment_1;blast_gaps=0;Target=SL_MboI0052A02_SP6_157381 1 413 +;blast_percent_identity=98.06;blast_mismatches=8;blast_evalue=0.0
C04HBa0114G11.1	BLAST_tomato_bac_ends	match	23734	24283	1033	+	0	ID=SL_MboI0105L08_SP6_304764_fwd_alignment_1;blast_gaps=0;Target=SL_MboI0105L08_SP6_304764 1 550 +;blast_percent_identity=99.64;blast_mismatches=2;blast_evalue=0.0
C04HBa0114G11.1	BLAST_tomato_bac_ends	match	12474	13088	1166	+	0	ID=SL_MboI0136L04_SP6_361098_fwd_alignment_1;blast_gaps=0;Target=SL_MboI0136L04_SP6_361098 1 615 +;blast_percent_identity=99.35;blast_mismatches=4;blast_evalue=0.0
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match	7780	8420	0.998	-	0	ID=SGN-E266423_alignment_2;Target=SGN-E266423 1 492 -
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	7945	8420	0.998	-	0	ID=GTH_SGN_E_tom_match_part_1;Target=SGN-E266423 1 476 -;Parent=SGN-E266423_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	7780	7795	0.500	-	0	ID=GTH_SGN_E_tom_match_part_2;Target=SGN-E266423 477 492 -;Parent=SGN-E266423_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match	7785	8511	0.995	-	0	ID=SGN-E377683_alignment_2;Target=SGN-E377683 1 586 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	7938	8511	0.995	-	0	ID=GTH_SGN_E_tom_match_part_3;Target=SGN-E377683 1 575 +;Parent=SGN-E377683_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	7785	7795	0.545	-	0	ID=GTH_SGN_E_tom_match_part_4;Target=SGN-E377683 576 586 +;Parent=SGN-E377683_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match	8287	9375	1.000	-	0	ID=SGN-E238482_alignment_2;Target=SGN-E238482 1 529 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	9316	9375	1.000	-	0	ID=GTH_SGN_E_tom_match_part_5;Target=SGN-E238482 1 60 +;Parent=SGN-E238482_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	8775	8845	1.000	-	0	ID=GTH_SGN_E_tom_match_part_6;Target=SGN-E238482 61 131 +;Parent=SGN-E238482_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	8287	8684	1.000	-	0	ID=GTH_SGN_E_tom_match_part_7;Target=SGN-E238482 132 529 +;Parent=SGN-E238482_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match	8395	9711	0.993	-	0	ID=SGN-E233038_alignment_2;Target=SGN-E233038 1 587 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	9648	9711	1.000	-	0	ID=GTH_SGN_E_tom_match_part_8;Target=SGN-E233038 1 64 +;Parent=SGN-E233038_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	9491	9558	1.000	-	0	ID=GTH_SGN_E_tom_match_part_9;Target=SGN-E233038 65 132 +;Parent=SGN-E233038_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	9316	9409	1.000	-	0	ID=GTH_SGN_E_tom_match_part_10;Target=SGN-E233038 133 226 +;Parent=SGN-E233038_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	8775	8845	1.000	-	0	ID=GTH_SGN_E_tom_match_part_11;Target=SGN-E233038 227 297 +;Parent=SGN-E233038_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	8395	8684	0.986	-	0	ID=GTH_SGN_E_tom_match_part_12;Target=SGN-E233038 298 587 +;Parent=SGN-E233038_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match	8464	9711	1.000	-	0	ID=SGN-E235703_alignment_2;Target=SGN-E235703 1 518 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	9648	9711	1.000	-	0	ID=GTH_SGN_E_tom_match_part_13;Target=SGN-E235703 1 64 +;Parent=SGN-E235703_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	9491	9558	1.000	-	0	ID=GTH_SGN_E_tom_match_part_14;Target=SGN-E235703 65 132 +;Parent=SGN-E235703_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	9316	9409	1.000	-	0	ID=GTH_SGN_E_tom_match_part_15;Target=SGN-E235703 133 226 +;Parent=SGN-E235703_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	8775	8845	1.000	-	0	ID=GTH_SGN_E_tom_match_part_16;Target=SGN-E235703 227 297 +;Parent=SGN-E235703_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	8464	8684	1.000	-	0	ID=GTH_SGN_E_tom_match_part_17;Target=SGN-E235703 298 518 +;Parent=SGN-E235703_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match	8490	9711	0.992	-	0	ID=SGN-E377684_alignment_2;Target=SGN-E377684 1 492 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	9648	9711	1.000	-	0	ID=GTH_SGN_E_tom_match_part_18;Target=SGN-E377684 1 64 +;Parent=SGN-E377684_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	9491	9558	1.000	-	0	ID=GTH_SGN_E_tom_match_part_19;Target=SGN-E377684 65 132 +;Parent=SGN-E377684_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	9316	9409	1.000	-	0	ID=GTH_SGN_E_tom_match_part_20;Target=SGN-E377684 133 226 +;Parent=SGN-E377684_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	8775	8845	1.000	-	0	ID=GTH_SGN_E_tom_match_part_21;Target=SGN-E377684 227 297 +;Parent=SGN-E377684_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	8490	8684	0.979	-	0	ID=GTH_SGN_E_tom_match_part_22;Target=SGN-E377684 298 492 +;Parent=SGN-E377684_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match	8532	9945	1.000	-	0	ID=SGN-E241392_alignment_2;Target=SGN-E241392 1 536 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	9866	9945	1.000	-	0	ID=GTH_SGN_E_tom_match_part_23;Target=SGN-E241392 1 80 +;Parent=SGN-E241392_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	9648	9714	1.000	-	0	ID=GTH_SGN_E_tom_match_part_24;Target=SGN-E241392 81 147 +;Parent=SGN-E241392_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	9491	9558	1.000	-	0	ID=GTH_SGN_E_tom_match_part_25;Target=SGN-E241392 148 215 +;Parent=SGN-E241392_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	9316	9412	1.000	-	0	ID=GTH_SGN_E_tom_match_part_26;Target=SGN-E241392 216 312 +;Parent=SGN-E241392_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	8775	8845	1.000	-	0	ID=GTH_SGN_E_tom_match_part_27;Target=SGN-E241392 313 383 +;Parent=SGN-E241392_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	8532	8684	1.000	-	0	ID=GTH_SGN_E_tom_match_part_28;Target=SGN-E241392 384 536 +;Parent=SGN-E241392_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match	9389	9945	1.000	-	0	ID=SGN-E239957_alignment_2;Target=SGN-E239957 1 239 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	9866	9945	1.000	-	0	ID=GTH_SGN_E_tom_match_part_29;Target=SGN-E239957 1 80 +;Parent=SGN-E239957_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	9648	9714	1.000	-	0	ID=GTH_SGN_E_tom_match_part_30;Target=SGN-E239957 81 147 +;Parent=SGN-E239957_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	9491	9558	1.000	-	0	ID=GTH_SGN_E_tom_match_part_31;Target=SGN-E239957 148 215 +;Parent=SGN-E239957_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	9389	9412	1.000	-	0	ID=GTH_SGN_E_tom_match_part_32;Target=SGN-E239957 216 239 +;Parent=SGN-E239957_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match	10168	16776	1.000	-	0	ID=SGN-E257906_alignment_2;Target=SGN-E257906 1 532 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	16752	16776	1.000	-	0	ID=GTH_SGN_E_tom_match_part_33;Target=SGN-E257906 1 25 +;Parent=SGN-E257906_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	15764	15875	1.000	-	0	ID=GTH_SGN_E_tom_match_part_34;Target=SGN-E257906 26 137 +;Parent=SGN-E257906_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	14351	14461	1.000	-	0	ID=GTH_SGN_E_tom_match_part_35;Target=SGN-E257906 138 248 +;Parent=SGN-E257906_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	13391	13467	1.000	-	0	ID=GTH_SGN_E_tom_match_part_36;Target=SGN-E257906 249 325 +;Parent=SGN-E257906_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	11966	12032	1.000	-	0	ID=GTH_SGN_E_tom_match_part_37;Target=SGN-E257906 326 392 +;Parent=SGN-E257906_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	11542	11607	1.000	-	0	ID=GTH_SGN_E_tom_match_part_38;Target=SGN-E257906 393 458 +;Parent=SGN-E257906_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	10168	10241	1.000	-	0	ID=GTH_SGN_E_tom_match_part_39;Target=SGN-E257906 459 532 +;Parent=SGN-E257906_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match	14373	18985	1.000	-	0	ID=SGN-E273124_alignment_2;Target=SGN-E273124 1 595 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	18912	18985	1.000	-	0	ID=GTH_SGN_E_tom_match_part_40;Target=SGN-E273124 1 74 +;Parent=SGN-E273124_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	17575	17670	1.000	-	0	ID=GTH_SGN_E_tom_match_part_41;Target=SGN-E273124 75 170 +;Parent=SGN-E273124_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	17169	17221	1.000	-	0	ID=GTH_SGN_E_tom_match_part_42;Target=SGN-E273124 171 223 +;Parent=SGN-E273124_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	16917	17013	1.000	-	0	ID=GTH_SGN_E_tom_match_part_43;Target=SGN-E273124 224 320 +;Parent=SGN-E273124_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	16752	16825	1.000	-	0	ID=GTH_SGN_E_tom_match_part_44;Target=SGN-E273124 321 394 +;Parent=SGN-E273124_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	15764	15875	1.000	-	0	ID=GTH_SGN_E_tom_match_part_45;Target=SGN-E273124 395 506 +;Parent=SGN-E273124_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	14373	14461	1.000	-	0	ID=GTH_SGN_E_tom_match_part_46;Target=SGN-E273124 507 595 +;Parent=SGN-E273124_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match	16752	20111	0.998	-	0	ID=SGN-E252501_alignment_2;Target=SGN-E252501 1 553 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	20089	20111	0.957	-	0	ID=GTH_SGN_E_tom_match_part_47;Target=SGN-E252501 1 23 +;Parent=SGN-E252501_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	18912	19121	0.995	-	0	ID=GTH_SGN_E_tom_match_part_48;Target=SGN-E252501 24 233 +;Parent=SGN-E252501_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	17575	17670	1.000	-	0	ID=GTH_SGN_E_tom_match_part_49;Target=SGN-E252501 234 329 +;Parent=SGN-E252501_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	17169	17221	1.000	-	0	ID=GTH_SGN_E_tom_match_part_50;Target=SGN-E252501 330 382 +;Parent=SGN-E252501_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	16917	17013	1.000	-	0	ID=GTH_SGN_E_tom_match_part_51;Target=SGN-E252501 383 479 +;Parent=SGN-E252501_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	16752	16825	1.000	-	0	ID=GTH_SGN_E_tom_match_part_52;Target=SGN-E252501 480 553 +;Parent=SGN-E252501_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match	16932	19121	1.000	-	0	ID=SGN-E245103_alignment_2;Target=SGN-E245103 8 448 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	18912	19121	1.000	-	0	ID=GTH_SGN_E_tom_match_part_53;Target=SGN-E245103 8 217 +;Parent=SGN-E245103_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	17575	17670	1.000	-	0	ID=GTH_SGN_E_tom_match_part_54;Target=SGN-E245103 218 313 +;Parent=SGN-E245103_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	17169	17221	1.000	-	0	ID=GTH_SGN_E_tom_match_part_55;Target=SGN-E245103 314 366 +;Parent=SGN-E245103_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	16932	17013	1.000	-	0	ID=GTH_SGN_E_tom_match_part_56;Target=SGN-E245103 367 448 +;Parent=SGN-E245103_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match	17005	20394	1.000	-	0	ID=SGN-E325762_alignment_2;Target=SGN-E325762 1 674 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	20089	20394	1.000	-	0	ID=GTH_SGN_E_tom_match_part_57;Target=SGN-E325762 1 306 +;Parent=SGN-E325762_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	18912	19121	1.000	-	0	ID=GTH_SGN_E_tom_match_part_58;Target=SGN-E325762 307 516 +;Parent=SGN-E325762_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	17575	17670	1.000	-	0	ID=GTH_SGN_E_tom_match_part_59;Target=SGN-E325762 517 612 +;Parent=SGN-E325762_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	17169	17221	1.000	-	0	ID=GTH_SGN_E_tom_match_part_60;Target=SGN-E325762 613 665 +;Parent=SGN-E325762_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	17005	17013	1.000	-	0	ID=GTH_SGN_E_tom_match_part_61;Target=SGN-E325762 666 674 +;Parent=SGN-E325762_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match	17615	20257	1.000	-	0	ID=SGN-E338484_alignment_2;Target=SGN-E338484 1 435 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	20089	20257	1.000	-	0	ID=GTH_SGN_E_tom_match_part_62;Target=SGN-E338484 1 169 +;Parent=SGN-E338484_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	18912	19121	1.000	-	0	ID=GTH_SGN_E_tom_match_part_63;Target=SGN-E338484 170 379 +;Parent=SGN-E338484_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	17615	17670	1.000	-	0	ID=GTH_SGN_E_tom_match_part_64;Target=SGN-E338484 380 435 +;Parent=SGN-E338484_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match	19058	20379	0.989	-	0	ID=SGN-E330105_alignment_2;Target=SGN-E330105 1 355 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	20089	20379	0.997	-	0	ID=GTH_SGN_E_tom_match_part_65;Target=SGN-E330105 1 291 +;Parent=SGN-E330105_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	19058	19121	0.953	-	0	ID=GTH_SGN_E_tom_match_part_66;Target=SGN-E330105 292 355 +;Parent=SGN-E330105_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match	20091	20379	1.000	-	0	ID=SGN-E330104_alignment_2;Target=SGN-E330104 1 289 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	20091	20379	1.000	-	0	ID=GTH_SGN_E_tom_match_part_67;Target=SGN-E330104 1 289 +;Parent=SGN-E330104_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match	20147	20391	1.000	-	0	ID=SGN-E305372_alignment_2;Target=SGN-E305372 1 245 +
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	match_part	20147	20391	1.000	-	0	ID=GTH_SGN_E_tom_match_part_68;Target=SGN-E305372 1 245 +;Parent=SGN-E305372_alignment_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	gene	7780	9945	.	-	0	ID=GTH_SGN_E_tom_gene_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	mRNA	7785	9711	.	-	0	ID=GTH_SGN_E_tom_gene_1_AGS_1;Parent=GTH_SGN_E_tom_gene_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	9648	9711	1.000	-	0	ID=GTH_SGN_E_tom_exon_1;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	9491	9558	1.000	-	0	ID=GTH_SGN_E_tom_exon_2;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	9316	9409	1.000	-	0	ID=GTH_SGN_E_tom_exon_3;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	8775	8845	1.000	-	0	ID=GTH_SGN_E_tom_exon_4;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	7938	8684	0.995	-	0	ID=GTH_SGN_E_tom_exon_5;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	7785	7795	0.545	-	0	ID=GTH_SGN_E_tom_exon_6;Parent=GTH_SGN_E_tom_gene_1_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	mRNA	7780	9711	.	-	0	ID=GTH_SGN_E_tom_gene_1_AGS_2;Parent=GTH_SGN_E_tom_gene_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	9648	9711	1.000	-	0	ID=GTH_SGN_E_tom_exon_7;Parent=GTH_SGN_E_tom_gene_1_AGS_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	9491	9558	1.000	-	0	ID=GTH_SGN_E_tom_exon_8;Parent=GTH_SGN_E_tom_gene_1_AGS_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	9316	9409	1.000	-	0	ID=GTH_SGN_E_tom_exon_9;Parent=GTH_SGN_E_tom_gene_1_AGS_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	8775	8845	1.000	-	0	ID=GTH_SGN_E_tom_exon_10;Parent=GTH_SGN_E_tom_gene_1_AGS_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	7945	8684	0.998	-	0	ID=GTH_SGN_E_tom_exon_11;Parent=GTH_SGN_E_tom_gene_1_AGS_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	7780	7795	0.500	-	0	ID=GTH_SGN_E_tom_exon_12;Parent=GTH_SGN_E_tom_gene_1_AGS_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	mRNA	7785	9945	.	-	0	ID=GTH_SGN_E_tom_gene_1_AGS_3;Parent=GTH_SGN_E_tom_gene_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	9866	9945	1.000	-	0	ID=GTH_SGN_E_tom_exon_13;Parent=GTH_SGN_E_tom_gene_1_AGS_3
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	9648	9714	1.000	-	0	ID=GTH_SGN_E_tom_exon_14;Parent=GTH_SGN_E_tom_gene_1_AGS_3
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	9491	9558	1.000	-	0	ID=GTH_SGN_E_tom_exon_15;Parent=GTH_SGN_E_tom_gene_1_AGS_3
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	9316	9412	1.000	-	0	ID=GTH_SGN_E_tom_exon_16;Parent=GTH_SGN_E_tom_gene_1_AGS_3
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	8775	8845	1.000	-	0	ID=GTH_SGN_E_tom_exon_17;Parent=GTH_SGN_E_tom_gene_1_AGS_3
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	7938	8684	0.995	-	0	ID=GTH_SGN_E_tom_exon_18;Parent=GTH_SGN_E_tom_gene_1_AGS_3
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	7785	7795	0.545	-	0	ID=GTH_SGN_E_tom_exon_19;Parent=GTH_SGN_E_tom_gene_1_AGS_3
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	gene	10168	20394	.	-	0	ID=GTH_SGN_E_tom_gene_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	mRNA	10168	20394	.	-	0	ID=GTH_SGN_E_tom_gene_2_AGS_1;Parent=GTH_SGN_E_tom_gene_2
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	20089	20394	1.000	-	0	ID=GTH_SGN_E_tom_exon_20;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	18912	19121	1.000	-	0	ID=GTH_SGN_E_tom_exon_21;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	17575	17670	1.000	-	0	ID=GTH_SGN_E_tom_exon_22;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	17169	17221	1.000	-	0	ID=GTH_SGN_E_tom_exon_23;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	16917	17013	1.000	-	0	ID=GTH_SGN_E_tom_exon_24;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	16752	16825	1.000	-	0	ID=GTH_SGN_E_tom_exon_25;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	15764	15875	1.000	-	0	ID=GTH_SGN_E_tom_exon_26;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	14351	14461	1.000	-	0	ID=GTH_SGN_E_tom_exon_27;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	13391	13467	1.000	-	0	ID=GTH_SGN_E_tom_exon_28;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	11966	12032	1.000	-	0	ID=GTH_SGN_E_tom_exon_29;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	11542	11607	1.000	-	0	ID=GTH_SGN_E_tom_exon_30;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_E_tomato	exon	10168	10241	1.000	-	0	ID=GTH_SGN_E_tom_exon_31;Parent=GTH_SGN_E_tom_gene_2_AGS_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	gene	8174	20223	2	-	.	ID=g1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	transcript	8174	20223	.	-	.	ID=g1.t1_1;Parent=g1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	stop_codon	8174	8176	.	-	0	Parent=g1.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	8174	8684	.	-	1	ID=g1.t1.cds_1;Parent=g1.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	8775	8845	.	-	0	ID=g1.t1.cds_2;Parent=g1.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	9316	9412	.	-	1	ID=g1.t1.cds_3;Parent=g1.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	9491	9558	.	-	0	ID=g1.t1.cds_4;Parent=g1.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	9648	9714	.	-	1	ID=g1.t1.cds_5;Parent=g1.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	9866	9996	.	-	0	ID=g1.t1.cds_6;Parent=g1.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	10134	10241	.	-	0	ID=g1.t1.cds_7;Parent=g1.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	11542	11607	.	-	0	ID=g1.t1.cds_8;Parent=g1.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	11966	12032	.	-	1	ID=g1.t1.cds_9;Parent=g1.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	13391	13467	.	-	0	ID=g1.t1.cds_10;Parent=g1.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	14351	14461	.	-	0	ID=g1.t1.cds_11;Parent=g1.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	15764	15875	.	-	1	ID=g1.t1.cds_12;Parent=g1.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	16752	16825	.	-	0	ID=g1.t1.cds_13;Parent=g1.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	16917	17013	.	-	1	ID=g1.t1.cds_14;Parent=g1.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	17169	17221	.	-	0	ID=g1.t1.cds_15;Parent=g1.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	17575	17670	.	-	0	ID=g1.t1.cds_16;Parent=g1.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	18912	19121	.	-	0	ID=g1.t1.cds_17;Parent=g1.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	20089	20223	.	-	0	ID=g1.t1.cds_18;Parent=g1.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	start_codon	20221	20223	.	-	0	Parent=g1.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	transcript	8174	20223	.	-	.	ID=g1.t2_1;Parent=g1_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	stop_codon	8174	8176	.	-	0	Parent=g1.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	8174	8684	.	-	1	ID=g1.t2.cds_1;Parent=g1.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	8775	8845	.	-	0	ID=g1.t2.cds_2;Parent=g1.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	9316	9409	.	-	1	ID=g1.t2.cds_3;Parent=g1.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	9491	9558	.	-	0	ID=g1.t2.cds_4;Parent=g1.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	9648	9714	.	-	1	ID=g1.t2.cds_5;Parent=g1.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	9866	9996	.	-	0	ID=g1.t2.cds_6;Parent=g1.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	10134	10241	.	-	0	ID=g1.t2.cds_7;Parent=g1.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	11542	11607	.	-	0	ID=g1.t2.cds_8;Parent=g1.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	11966	12032	.	-	1	ID=g1.t2.cds_9;Parent=g1.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	13391	13467	.	-	0	ID=g1.t2.cds_10;Parent=g1.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	14351	14461	.	-	0	ID=g1.t2.cds_11;Parent=g1.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	15764	15875	.	-	1	ID=g1.t2.cds_12;Parent=g1.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	16752	16825	.	-	0	ID=g1.t2.cds_13;Parent=g1.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	16917	17013	.	-	1	ID=g1.t2.cds_14;Parent=g1.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	17169	17221	.	-	0	ID=g1.t2.cds_15;Parent=g1.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	17575	17670	.	-	0	ID=g1.t2.cds_16;Parent=g1.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	18912	19121	.	-	0	ID=g1.t2.cds_17;Parent=g1.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	CDS	20089	20223	.	-	0	ID=g1.t2.cds_18;Parent=g1.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_cdna	start_codon	20221	20223	.	-	0	Parent=g1.t2_1
C04HBa0114G11.1	AUGUSTUS_ab_initio	gene	8174	18992	1	-	.	ID=g1_2
C04HBa0114G11.1	AUGUSTUS_ab_initio	transcript	8174	18992	.	-	.	ID=g1.t1_2;Parent=g1_2
C04HBa0114G11.1	AUGUSTUS_ab_initio	stop_codon	8174	8176	.	-	0	Parent=g1.t1_2
C04HBa0114G11.1	AUGUSTUS_ab_initio	CDS	8174	8743	.	-	0	ID=g1.t1.cds_19;Parent=g1.t1_2
C04HBa0114G11.1	AUGUSTUS_ab_initio	CDS	9316	9412	.	-	1	ID=g1.t1.cds_20;Parent=g1.t1_2
C04HBa0114G11.1	AUGUSTUS_ab_initio	CDS	9491	9558	.	-	0	ID=g1.t1.cds_21;Parent=g1.t1_2
C04HBa0114G11.1	AUGUSTUS_ab_initio	CDS	9648	9714	.	-	1	ID=g1.t1.cds_22;Parent=g1.t1_2
C04HBa0114G11.1	AUGUSTUS_ab_initio	CDS	9866	9996	.	-	0	ID=g1.t1.cds_23;Parent=g1.t1_2
C04HBa0114G11.1	AUGUSTUS_ab_initio	CDS	11542	11607	.	-	0	ID=g1.t1.cds_24;Parent=g1.t1_2
C04HBa0114G11.1	AUGUSTUS_ab_initio	CDS	18912	18992	.	-	0	ID=g1.t1.cds_25;Parent=g1.t1_2
C04HBa0114G11.1	AUGUSTUS_ab_initio	start_codon	18990	18992	.	-	0	Parent=g1.t1_2
C04HBa0114G11.1	AUGUSTUS_tom_ugs	gene	8174	20223	1	-	.	ID=g1_3
C04HBa0114G11.1	AUGUSTUS_tom_ugs	transcript	8174	20223	.	-	.	ID=g1.t1_3;Parent=g1_3
C04HBa0114G11.1	AUGUSTUS_tom_ugs	stop_codon	8174	8176	.	-	0	Parent=g1.t1_3
C04HBa0114G11.1	AUGUSTUS_tom_ugs	CDS	8174	8684	.	-	1	ID=g1.t1.cds_26;Parent=g1.t1_3
C04HBa0114G11.1	AUGUSTUS_tom_ugs	CDS	8775	8845	.	-	0	ID=g1.t1.cds_27;Parent=g1.t1_3
C04HBa0114G11.1	AUGUSTUS_tom_ugs	CDS	9316	9409	.	-	1	ID=g1.t1.cds_28;Parent=g1.t1_3
C04HBa0114G11.1	AUGUSTUS_tom_ugs	CDS	9491	9558	.	-	0	ID=g1.t1.cds_29;Parent=g1.t1_3
C04HBa0114G11.1	AUGUSTUS_tom_ugs	CDS	9648	9714	.	-	1	ID=g1.t1.cds_30;Parent=g1.t1_3
C04HBa0114G11.1	AUGUSTUS_tom_ugs	CDS	9866	9996	.	-	0	ID=g1.t1.cds_31;Parent=g1.t1_3
C04HBa0114G11.1	AUGUSTUS_tom_ugs	CDS	10134	10241	.	-	0	ID=g1.t1.cds_32;Parent=g1.t1_3
C04HBa0114G11.1	AUGUSTUS_tom_ugs	CDS	11542	11607	.	-	0	ID=g1.t1.cds_33;Parent=g1.t1_3
C04HBa0114G11.1	AUGUSTUS_tom_ugs	CDS	11966	12032	.	-	1	ID=g1.t1.cds_34;Parent=g1.t1_3
C04HBa0114G11.1	AUGUSTUS_tom_ugs	CDS	13391	13467	.	-	0	ID=g1.t1.cds_35;Parent=g1.t1_3
C04HBa0114G11.1	AUGUSTUS_tom_ugs	CDS	14351	14461	.	-	0	ID=g1.t1.cds_36;Parent=g1.t1_3
C04HBa0114G11.1	AUGUSTUS_tom_ugs	CDS	15764	15875	.	-	1	ID=g1.t1.cds_37;Parent=g1.t1_3
C04HBa0114G11.1	AUGUSTUS_tom_ugs	CDS	16752	16825	.	-	0	ID=g1.t1.cds_38;Parent=g1.t1_3
C04HBa0114G11.1	AUGUSTUS_tom_ugs	CDS	16917	17013	.	-	1	ID=g1.t1.cds_39;Parent=g1.t1_3
C04HBa0114G11.1	AUGUSTUS_tom_ugs	CDS	17169	17221	.	-	0	ID=g1.t1.cds_40;Parent=g1.t1_3
C04HBa0114G11.1	AUGUSTUS_tom_ugs	CDS	17575	17670	.	-	0	ID=g1.t1.cds_41;Parent=g1.t1_3
C04HBa0114G11.1	AUGUSTUS_tom_ugs	CDS	18912	19121	.	-	0	ID=g1.t1.cds_42;Parent=g1.t1_3
C04HBa0114G11.1	AUGUSTUS_tom_ugs	CDS	20089	20223	.	-	0	ID=g1.t1.cds_43;Parent=g1.t1_3
C04HBa0114G11.1	AUGUSTUS_tom_ugs	start_codon	20221	20223	.	-	0	Parent=g1.t1_3
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	match	7780	9945	0.999	-	0	ID=SGN-U321903_alignment_1;Target=SGN-U321903 1 1136 +
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	match_part	9866	9945	1.000	-	0	ID=GTH_SGN_U_tom_match_part_1;Target=SGN-U321903 1 80 +;Parent=SGN-U321903_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	match_part	9648	9714	1.000	-	0	ID=GTH_SGN_U_tom_match_part_2;Target=SGN-U321903 81 147 +;Parent=SGN-U321903_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	match_part	9491	9558	1.000	-	0	ID=GTH_SGN_U_tom_match_part_3;Target=SGN-U321903 148 215 +;Parent=SGN-U321903_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	match_part	9316	9409	1.000	-	0	ID=GTH_SGN_U_tom_match_part_4;Target=SGN-U321903 216 309 +;Parent=SGN-U321903_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	match_part	8775	8845	1.000	-	0	ID=GTH_SGN_U_tom_match_part_5;Target=SGN-U321903 310 380 +;Parent=SGN-U321903_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	match_part	7945	8684	0.999	-	0	ID=GTH_SGN_U_tom_match_part_6;Target=SGN-U321903 381 1120 +;Parent=SGN-U321903_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	match_part	7780	7795	0.500	-	0	ID=GTH_SGN_U_tom_match_part_7;Target=SGN-U321903 1121 1136 +;Parent=SGN-U321903_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	match	10168	20394	1.000	-	0	ID=SGN-U321574_alignment_1;Target=SGN-U321574 1 1343 +
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	match_part	20089	20394	1.000	-	0	ID=GTH_SGN_U_tom_match_part_8;Target=SGN-U321574 1 306 +;Parent=SGN-U321574_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	match_part	18912	19121	1.000	-	0	ID=GTH_SGN_U_tom_match_part_9;Target=SGN-U321574 307 516 +;Parent=SGN-U321574_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	match_part	17575	17670	1.000	-	0	ID=GTH_SGN_U_tom_match_part_10;Target=SGN-U321574 517 612 +;Parent=SGN-U321574_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	match_part	17169	17221	1.000	-	0	ID=GTH_SGN_U_tom_match_part_11;Target=SGN-U321574 613 665 +;Parent=SGN-U321574_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	match_part	16917	17013	1.000	-	0	ID=GTH_SGN_U_tom_match_part_12;Target=SGN-U321574 666 762 +;Parent=SGN-U321574_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	match_part	16752	16825	1.000	-	0	ID=GTH_SGN_U_tom_match_part_13;Target=SGN-U321574 763 836 +;Parent=SGN-U321574_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	match_part	15764	15875	1.000	-	0	ID=GTH_SGN_U_tom_match_part_14;Target=SGN-U321574 837 948 +;Parent=SGN-U321574_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	match_part	14351	14461	1.000	-	0	ID=GTH_SGN_U_tom_match_part_15;Target=SGN-U321574 949 1059 +;Parent=SGN-U321574_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	match_part	13391	13467	1.000	-	0	ID=GTH_SGN_U_tom_match_part_16;Target=SGN-U321574 1060 1136 +;Parent=SGN-U321574_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	match_part	11966	12032	1.000	-	0	ID=GTH_SGN_U_tom_match_part_17;Target=SGN-U321574 1137 1203 +;Parent=SGN-U321574_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	match_part	11542	11607	1.000	-	0	ID=GTH_SGN_U_tom_match_part_18;Target=SGN-U321574 1204 1269 +;Parent=SGN-U321574_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	match_part	10168	10241	1.000	-	0	ID=GTH_SGN_U_tom_match_part_19;Target=SGN-U321574 1270 1343 +;Parent=SGN-U321574_alignment_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	gene	7780	9945	.	-	0	ID=GTH_SGN_U_tom_gene_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	mRNA	7780	9945	.	-	0	ID=GTH_SGN_U_tom_gene_1_AGS_1;Parent=GTH_SGN_U_tom_gene_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	exon	9866	9945	1.000	-	0	ID=GTH_SGN_U_tom_exon_1;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	exon	9648	9714	1.000	-	0	ID=GTH_SGN_U_tom_exon_2;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	exon	9491	9558	1.000	-	0	ID=GTH_SGN_U_tom_exon_3;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	exon	9316	9409	1.000	-	0	ID=GTH_SGN_U_tom_exon_4;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	exon	8775	8845	1.000	-	0	ID=GTH_SGN_U_tom_exon_5;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	exon	7945	8684	0.999	-	0	ID=GTH_SGN_U_tom_exon_6;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	exon	7780	7795	0.500	-	0	ID=GTH_SGN_U_tom_exon_7;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	gene	10168	20394	.	-	0	ID=GTH_SGN_U_tom_gene_2
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	mRNA	10168	20394	.	-	0	ID=GTH_SGN_U_tom_gene_2_AGS_1;Parent=GTH_SGN_U_tom_gene_2
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	exon	20089	20394	1.000	-	0	ID=GTH_SGN_U_tom_exon_8;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	exon	18912	19121	1.000	-	0	ID=GTH_SGN_U_tom_exon_9;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	exon	17575	17670	1.000	-	0	ID=GTH_SGN_U_tom_exon_10;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	exon	17169	17221	1.000	-	0	ID=GTH_SGN_U_tom_exon_11;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	exon	16917	17013	1.000	-	0	ID=GTH_SGN_U_tom_exon_12;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	exon	16752	16825	1.000	-	0	ID=GTH_SGN_U_tom_exon_13;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	exon	15764	15875	1.000	-	0	ID=GTH_SGN_U_tom_exon_14;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	exon	14351	14461	1.000	-	0	ID=GTH_SGN_U_tom_exon_15;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	exon	13391	13467	1.000	-	0	ID=GTH_SGN_U_tom_exon_16;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	exon	11966	12032	1.000	-	0	ID=GTH_SGN_U_tom_exon_17;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	exon	11542	11607	1.000	-	0	ID=GTH_SGN_U_tom_exon_18;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0114G11.1	GenomeThreader_SGN_U_tomato	exon	10168	10241	1.000	-	0	ID=GTH_SGN_U_tom_exon_19;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	gene	287	413	1	-	.	ID=g1_4
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	transcript	287	413	.	-	.	ID=g1.t1_4;Parent=g1_4
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	287	413	.	-	0	ID=g1.t1.cds_44;Parent=g1.t1_4
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	start_codon	411	413	.	-	0	Parent=g1.t1_4
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	gene	8174	20223	2	-	.	ID=g2_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	transcript	8174	20223	.	-	.	ID=g2.t1_1;Parent=g2_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	stop_codon	8174	8176	.	-	0	Parent=g2.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	8174	8684	.	-	1	ID=g2.t1.cds_1;Parent=g2.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	8775	8845	.	-	0	ID=g2.t1.cds_2;Parent=g2.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	9316	9412	.	-	1	ID=g2.t1.cds_3;Parent=g2.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	9491	9558	.	-	0	ID=g2.t1.cds_4;Parent=g2.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	9648	9714	.	-	1	ID=g2.t1.cds_5;Parent=g2.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	9866	9996	.	-	0	ID=g2.t1.cds_6;Parent=g2.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	10134	10241	.	-	0	ID=g2.t1.cds_7;Parent=g2.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	11542	11607	.	-	0	ID=g2.t1.cds_8;Parent=g2.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	11966	12032	.	-	1	ID=g2.t1.cds_9;Parent=g2.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	13391	13467	.	-	0	ID=g2.t1.cds_10;Parent=g2.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	14351	14461	.	-	0	ID=g2.t1.cds_11;Parent=g2.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	15764	15875	.	-	1	ID=g2.t1.cds_12;Parent=g2.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	16752	16825	.	-	0	ID=g2.t1.cds_13;Parent=g2.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	16917	17013	.	-	1	ID=g2.t1.cds_14;Parent=g2.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	17169	17221	.	-	0	ID=g2.t1.cds_15;Parent=g2.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	17575	17670	.	-	0	ID=g2.t1.cds_16;Parent=g2.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	18912	19121	.	-	0	ID=g2.t1.cds_17;Parent=g2.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	20089	20223	.	-	0	ID=g2.t1.cds_18;Parent=g2.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	start_codon	20221	20223	.	-	0	Parent=g2.t1_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	transcript	8174	20223	.	-	.	ID=g2.t2_1;Parent=g2_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	stop_codon	8174	8176	.	-	0	Parent=g2.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	8174	8684	.	-	1	ID=g2.t2.cds_1;Parent=g2.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	8775	8845	.	-	0	ID=g2.t2.cds_2;Parent=g2.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	9316	9409	.	-	1	ID=g2.t2.cds_3;Parent=g2.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	9491	9558	.	-	0	ID=g2.t2.cds_4;Parent=g2.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	9648	9714	.	-	1	ID=g2.t2.cds_5;Parent=g2.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	9866	9996	.	-	0	ID=g2.t2.cds_6;Parent=g2.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	10134	10241	.	-	0	ID=g2.t2.cds_7;Parent=g2.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	11542	11607	.	-	0	ID=g2.t2.cds_8;Parent=g2.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	11966	12032	.	-	1	ID=g2.t2.cds_9;Parent=g2.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	13391	13467	.	-	0	ID=g2.t2.cds_10;Parent=g2.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	14351	14461	.	-	0	ID=g2.t2.cds_11;Parent=g2.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	15764	15875	.	-	1	ID=g2.t2.cds_12;Parent=g2.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	16752	16825	.	-	0	ID=g2.t2.cds_13;Parent=g2.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	16917	17013	.	-	1	ID=g2.t2.cds_14;Parent=g2.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	17169	17221	.	-	0	ID=g2.t2.cds_15;Parent=g2.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	17575	17670	.	-	0	ID=g2.t2.cds_16;Parent=g2.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	18912	19121	.	-	0	ID=g2.t2.cds_17;Parent=g2.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	CDS	20089	20223	.	-	0	ID=g2.t2.cds_18;Parent=g2.t2_1
C04HBa0114G11.1	AUGUSTUS_tom_pot_cdna	start_codon	20221	20223	.	-	0	Parent=g2.t2_1