<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 08:45:56"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06HBa0021K07-fziac/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06HBa0021K07-fziac/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U320534" ref_strand="+" ref_description="SGN-U320534        Tomato 200607 #1 [11 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr3:23345327-23347732 FORWARD | Aliases: F16M2.20(evalue: 1e-69, score=260) genbank/nr: gi|18412649|ref|NP_567140.1| expressed protein [Arabidopsis thaliana] gi|11283433|pir||T48106 hypothetical protein F16M2.20 - Arabidopsis thaliana gi|7523399|emb|CAB86418.1| hypothetical protein [Arabidopsis thaliana] gi|17473780|gb|AAL38325.1| unknown protein [Arabidopsis thaliana] gi|20148595|gb|AAM10188.1| unknown protein [Arabidopsis thaliana] gi|21593803|gb|AAM65770.1| unknown [Arabidopsis thaliana](evalue: 1e-67, score=260)">
      <seq>ggacgctcaaaccatagtaaataaaaaataaaaaatggcttctcttcgttttccattcttgtttcctcagccccacaagactccgtcttccgccacttcagatgctccatctcgctccttctccaccgtcgctgtcgccgtcgcgtccggaggttcagccctcgctgccgccggagcgatcattgccatatctcaaagccccaaaaatccgtttctggaaaatgctatgaattttctactttccaatttctcacctaacaaaaatcattcatcccctttgtggggttctgtttctctagcagataactcagctccggtcactgaatcgaggaccggaatggcattcccctcaattctgaaagatactcagcgactccttggaattgggctgcgtaaaaaggcggtttttggattgaaaaacattgatgtctatgcttatggtgtgtatgctgatgatgttgatgtaaagaggtatctggctgagaagcatggacggcgctctgtttctgaactgcagcaaaaggaagagttgagaaatcatctcatggaaaacaatatacgcatgactatcaggcttcaaatagtctatggcaggctaagcattaattctgtgcgcagtgctttcgaagaatctgttggcagcagattacataagtttgggggatgtgataataaggaattgcttcaaaggttcacttcccagtttaaggatgaaattaaattacctcggggatctatcattgaactctccagagatcatgactacatactccacacaacaattgatggaaaggaagtgggaagcatacaaagcaaactcttatgcagatcaatcctagacctatatattggtgatgagtcatttgatcacaaagccaatgaagatgtcgagtcgaacttggcttctctacttcacaagtagctacttctttagcataaagagaattttatcaacacgaggaatcaagttgtggtgatttatacttaacgcatgttagcttctattggttggatgattctctttaaatagttgaactagagaattaatctcttgcaaactgaacttagatctatgttttatatgctgatgagtggttttctctactcctgtaatattttgctttgcaatttttatagcatgattgaaataagtatgttggcttggttaccaaattttttttatttacctcattgaaatgcatcttggagtgtttcctgctaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0021K07.1" temp_strand="-" temp_description="C06HBa0021K07.1  AC209507.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0021K07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="6609" stop="863"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6311" g_stop="5872" g_length="440"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="440" r_length="440" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5871" i_stop="4764" i_length="1108">
            <donor d_prob="0.887" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4763" g_stop="4514" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="690" r_length="250" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4513" i_stop="2637" i_length="1877">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.801" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2636" g_stop="2545" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="691" r_stop="782" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="2544" i_stop="1603" i_length="942">
            <donor d_prob="0.779" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="1602" g_stop="1162" g_length="441"/>
          <reference_exon_boundary r_type="cDNA" r_start="783" r_stop="1223" r_length="441" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1224" polyA_stop="1265"/>
      <MATCH_line gen_id="C06HBa0021K07.1" gen_strand="-" ref_id="SGN-U320534" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1223</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0021K07.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U320534" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6311" e_stop="5872"/>
          <exon e_start="4763" e_stop="4514"/>
          <exon e_start="2636" e_stop="2545"/>
          <exon e_start="1602" e_stop="1162"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACGCTCAAACCATAGTAAATAAAAAATAAAAAATGGCTTCTCTTCGTTTTCCATTCTTGTTTCCTCAGCCCCACAAGACTCCGTCTTCCGCCACTTCAGATGCTCCATCTCGCTCCTTCTCCACCGTCGCTGTCGCCGTCGCGTCCGGAGGTTCAGCCCTCGCTGCCGCCGGAGCGATCATTGCCATAACTCAAAGCCCCAAAAATCCGTTTCTGGAAAATGCTATGAATTTTCTACTTTCCAATTTCTCACCTAACAAAAATCATTCATCCCCTTTGTGGGGTTCTGTTTCTCTAGCAGATAACTCAGCTCCGGTCACTGAATCGAGGACCGGAATGGCATTCCCCTCAATTCTGAAAGATACTCAGCGACTCCTTGGAATTGGGCTGCGTAAAAAGGCGGTTTTTGGATTGAAAAACATTGATGTCTATGCTTATGGTACTACATTGTCACTGCAATTTACTTAATTGATTTTGCTCTTTATCAATTTATGTTTCTGTCTCTTCTGCAAATGTTGTTATGCTGTAGCTGAGGTTCTTAATTTTTGTGATCCTTGTGTGGAGCACAGATGCTCAAATATATAAAATGAATTCCAATTCTATGGCAATAGGAAGTTATGGAGGACACAGATAAGGGTAGAAGGCTATAGGTAACTGTGTGTTGTCTCACTTATCCTTCCATACTAGTAAATAGTAATTGTAGCATTACATTTTTTTGCTATAGAATTTATACCTTTTTTATGTTGAGAATGTATTTTATCGGCTTCTTCACTTCTGTTATTCTTTTCCCGTGCTTCTTTGTTATTTTTTTTCTTGATCCAAGGGTATATGGAAAACAATCTCTCTACTTTCCAAGTTAGGGGTAGTACACACTACTCTCCCTGTCAGTTGTCACAACTCAATTCATGCTCTACCATTTATAGCTGTTCATGTGAGATCGTGTGGGCTTATCAATTGTTAACAGCTTGTATAGGCTTATCGATTCATGCTTACTATACATGTTACTTGGATTAATTTTTTGTAGCAACAAATACAGTTTTTTGCACCGTCAGTGCCAGTGGTGGAGCCAGGAAGTTATACAAGGGATTCAAAAAAATAATAGGATTCTCATACAAGAGATTGAACATAGGTCTTAAAGTAGTTGTGCAACCCCTTTGCCACTTTACTAGAATTTTGCCTTCTATCGAGGGGATGCAATAGTATCAAGGGGTTTCAATAGTGAAATAATACTAATATACAATTCATTTTTGCTCTATTTGCTCAATGTAAATTTTTTAACGAGGGGAAGTCAATTGAATCTCCTTTCTGCAACGTAGTTCCGTCCCTGGTCAGTTCATAAAAATTAAACCTGTGGTGGTATCATATTTGAGAATCTCATTGCCGTCTCTAGTGGACCTTCCTTTATATGATGGGGGGATATGCATTATAGCACTCTCTGTCTCCTTTTGAAAGTTTGAGTGTCTGCATTTCAAAGTAAAACTCATAAAAGTGATGTTTACTTTGAATATGGCCTTTATCTAATGTGATATCAATATGGCATTCTCTAGGTGTGTATGCTGATGATGTTGATGTAAAGAGGTATCTGGCTGAGAAGCATGGACGGCGCTCTGTTTCTGAACTGCAGCAAAAGGAAGAGTTGAGAAATCATCTCATGGAAAACAATATACGCATGACTATCAGGCTTCAAATAGTCTATGGCAGGCTAAGCATTAATTCTGTGCGCAGTGCTTTCGAAGAATCTGTTGGCAGCAGATTACATAAGTTTGGGGGATGTGATAATAAGGAATTGCTTCAAAGGTAATTCCTTAGCCTCATATTATTCATATCTTATTCAACCTTTTCTCGATTAATTACCATATCACAACAGGGGAACAAGCCTGCCAAAGCTGGGATGAAGCACTCCATTTGCTTGCAGTCTAAATTATTATGTTTTCGATATCATAGTCTTTAACATTATTACTGGACTCTTTGCCCAACTGCGATCAATTATCACTCAGCTACATACGTCACATCTTTTCTTGAGTAGAGTTATTGAGCTGTGGACAGGTTAACCCACAAGATATTTTTTGGAAATTGAAACTTCATTGTTTCTCAATCTTTCAAACTTTTACTGCCTCCTTCCAATCTCTCTCTCTCTATATAAAGGAGAATATTAGACATGTTGACGCGGCATGCCTAAAAGCTATTTATCTTTTTTTTGTGGGTTTTTTTGGCCATTTTTCAAATTTTAAAATACAAAAAATTCTCCTAACTATTAAAGATAGTCACATTTAATTTTTTCTTTATCAGTAGTCATATTTAATTTATTTTATCATTAAATGCTATTATTTTCTTTTCCTTAATATTTCTCATTTTCTTTTTCTTTTAGTATTTTAATTTCTTCCCTAATGATATTTGTCTTATTTCTTAAAATCACCTTTTCCCCTTTTAAGTTCCTTTTTACTTCTTTTTTAATTTATTCAATTCAAAAAACTATTTATGTTTTTTTAAAGATTCCTCTATTATGTCCATATAAAATCATAAATTTTTATTTCATGAAACTCCTACTCAAGATTATCCTTTTTATTTCTTATTTGAAGTAGAGTTTTCCATGTTTTGTTGTTGTAGTAAAGGTAGACTCAATAAAGAGGACTCTTAGATGTTGATCATTTACTCAGAGGAGTGTTGACAAGAGCTAGAAAATTGTGCATTGATTGATTAATATTTTTTAAAATCTATTTTCTTATGATTAAGGTCCTAATGAAGGTATGTGCATTGTGTTCTTTCTATGTAATTTTTTACGTTTGGAAGGTAAGAGCATATTGTTTGTACTTCGTTAGACGGAAATTAATTACTGTAACTTTGTCTTACGCTAATTTTTATCAAGGTTCAAACACTACTATTGATGGATTAGAAAATTTGAATATATATCTAATATTGAAATAAGGCTATTTTATGATATTCTTTTACTGTACAAAGAACCATTTATGTTTCTTCAGAGTTCTGATTAAGATACTAAGGAAGATGTGTTTTTGATACTTTAAAAAGACTATTAAGTTGGATAGAGGAAGGAAAAGAGAAAAAGAAGAAAAAGTTACTGAAATGTAAAACAGATACTACAATAAAAGATAGATGCAAAATTAAAAATATGAATATTTATTTAGATAATGATGAAAATTAGAGGAAAAACAACAATAATGAGTGAATAAAATTGACACCTCTCTTTGGCCAAGAATATTGTTAAAATTATTATGATACAAAAAAGAATTGTGTTAATTATTATTTCTGCATTCATTTTTGTTCTCTATTGTATAAATCTAAATGTTTATAAATAAAGCATTGTAAGACTTTTTAGAAATGATCATTAGAGTTTGAAAAATTGTGCAATAATTTCGTTTTTTTCTTAATAATTTAGATCATAAGAATGATGTTATACGAGTTTTTTATTATCCTAAGTTTAGAACTTTTTTTGGTCTAAGTAACAACTTATGACTTTGTTGGAAGTCATATAATTACTGACCAAACATTTCTCTTTACGAAATAACTTATACTTTGGATGTATAATACATATGCTCATATTATATATATATTTCTTCTATATATTATTTTCTCATAAAACTATTGACATCTTGTCATCTTTTTAACTTCTCAGTTCCCTAGTTCTTATTAACCAAAAGTGCCTTTTGCAACTGTAGGTTCACTTCCCAGTTTAAGGATGAAATTAAATTACCTCGGGGATCTATCATTGAACTCTCCAGAGATCATGACTACATACTCCACACAACAAGTAAGATGATTTATTTGCGCTGGTAGTATTTTGGAAATGAACAAGTTCCGTCTTTTTCCACTTTTTCTACAATGTTCATATTTCGATTTGATATGAATCTTTTGAAGTGAAGACTCTCAATCTGTCAGTGTAAACGCCCACAGGACGTGCATGTGTGTGTGTGTTTTGAGAAAAGATAAAATGTTATAGCTATCACTTGCTCAAATTATTGAAGAGCTATTGAATAGATACATAAGACATTAATTTATTTAGTCATTTCCCTAATAAGGTTGGCTTTCAAAGCAGTATGTTAGTGGCTACAATGAAGGGAACTTATTTCATCAAGTGAGTTCTATACAAGAACAATACCATAAGTATCCTAATTACACCGTCAGTTGGCACATTTATACCCTTACATTTCCTTTGTGGGAAGTGGCTAAATATTTTCCTGAATTTGATTACAGAAGTCATGCTGGAAATTATGCTTGTGTAGATTTCACCAATCGACCATCCCTATTCTCTTTTATACAGATATAGATTTTCTGGTCTTTACCGTCTTCACTGTCTATAAAACCAAAAGAAGAAATAGAAATTGTTATGTGTTAGCTGTTGAAAATATTCTTCGCCAAGAGACCAGTGATGATTTTTATTATCAGCTGTTAGCTCTTGAAAATATGCTTCCCCAAGATACTATTGATGATTTTCATTACCAATGGCTGATACACCTCTGTCACAGTGACTAATAAATAAGTTAAAGACATTCCATATTAAAAAAAAGACTTAAGTTAAACAGCATCAAAGTATTAGTTGAGATTTGTTCTACATGCATTTTATGTAAGAGACTGATGAGCTAAAAAAAAGACTTACATTAAACAGCATCAAAGTACTAGTTGTTTGCTTAAAGTTTGCTCTTGCATCAATCACTTAGATGAAGCTTAGGTTCTGTTTATTTTTCTTTTGTAGTTGATGGAAAGGAAGTGGGAAGCATACAAAGCAAACTCTTATGCAGATCAATCCTAGACCTATATATTGGTGATGAGTCATTTGATCACAAAGCCAATGAAGATGTCGAGTCGAACTTGGCTTCTCTACTTCACAAGTAGCTACTTCTTTAGCATAAAGAGAATTTTATCAACACGAGGAATCAAGTTGTGGTGATTTATACTTAACGCATGTTAGCTTCTATTGGTTGGATGATTCTCTTTAAATAGTTGAACTAGAGAATTAATCTCTTGCAAACTGAACTTAGATCTATGTTTTATATGCTGATGAGTGGTTTTCTCTACTCCTGTAATATTTTGCTTTGCAATTTTTATAGCATGATTGAAATAAGTATGTTGGCTTGGTTACCAAATTTCTTTTATTTACCTCATTGAAATGCATCTTGGAGTGTTTACTGCTAAG</genome_strand>
        <mrna_strand>GGACGCTCAAACCATAGTAAATAAAAAATAAAAAATGGCTTCTCTTCGTTTTCCATTCTTGTTTCCTCAGCCCCACAAGACTCCGTCTTCCGCCACTTCAGATGCTCCATCTCGCTCCTTCTCCACCGTCGCTGTCGCCGTCGCGTCCGGAGGTTCAGCCCTCGCTGCCGCCGGAGCGATCATTGCCATATCTCAAAGCCCCAAAAATCCGTTTCTGGAAAATGCTATGAATTTTCTACTTTCCAATTTCTCACCTAACAAAAATCATTCATCCCCTTTGTGGGGTTCTGTTTCTCTAGCAGATAACTCAGCTCCGGTCACTGAATCGAGGACCGGAATGGCATTCCCCTCAATTCTGAAAGATACTCAGCGACTCCTTGGAATTGGGCTGCGTAAAAAGGCGGTTTTTGGATTGAAAAACATTGATGTCTATGCTTATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTATGCTGATGATGTTGATGTAAAGAGGTATCTGGCTGAGAAGCATGGACGGCGCTCTGTTTCTGAACTGCAGCAAAAGGAAGAGTTGAGAAATCATCTCATGGAAAACAATATACGCATGACTATCAGGCTTCAAATAGTCTATGGCAGGCTAAGCATTAATTCTGTGCGCAGTGCTTTCGAAGAATCTGTTGGCAGCAGATTACATAAGTTTGGGGGATGTGATAATAAGGAATTGCTTCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCACTTCCCAGTTTAAGGATGAAATTAAATTACCTCGGGGATCTATCATTGAACTCTCCAGAGATCATGACTACATACTCCACACAACAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGGAAAGGAAGTGGGAAGCATACAAAGCAAACTCTTATGCAGATCAATCCTAGACCTATATATTGGTGATGAGTCATTTGATCACAAAGCCAATGAAGATGTCGAGTCGAACTTGGCTTCTCTACTTCACAAGTAGCTACTTCTTTAGCATAAAGAGAATTTTATCAACACGAGGAATCAAGTTGTGGTGATTTATACTTAACGCATGTTAGCTTCTATTGGTTGGATGATTCTCTTTAAATAGTTGAACTAGAGAATTAATCTCTTGCAAACTGAACTTAGATCTATGTTTTATATGCTGATGAGTGGTTTTCTCTACTCCTGTAATATTTTGCTTTGCAATTTTTATAGCATGATTGAAATAAGTATGTTGGCTTGGTTACCAAATTTTTTTTATTTACCTCATTGAAATGCATCTTGGAGTGTTTCCTGCTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318033" ref_strand="+" ref_description="SGN-U318033        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: AT5G19330.1 | Symbol: None | armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein, contains armadillo/beta-catenin-like repeats, Pfam:PF00514 and a BTB/POZ domain, Pfam:PF00651 | chr5:6507812-6512746 REVERSE | Aliases: F7K24.80, F7K24_80 (evalue: 4e-76, score=280) genbank/nr: gi|30687245|ref|NP_850852.1| expressed protein [Arabidopsis thaliana](evalue: 3e-74, score=280)">
      <seq>ctccatctcctacacctcaggtctatctgggtgagctgtatgtaaataattctacgctatctgatgtgacatttttagtcgaaggcaaacggttttatgcccacagaatttgtttacttgcttcttctgatgcatttcgcgcaatgtttgatggtggctacagggagagagatgccaaagatatagagattcccaacattccatgggatgtttttgagttgatgatgaggtacatatacacgggatctgttgatgttaatatgggtgttgcaaaggatcttctaagggttgctgatcaatatcttcttgagggccttaagcgtctgtgcgagtatgcaattgcccaggatatctcagtggaaaatgtctctctgatgtttgagttatcagaggctttcaatgcattgtcattaagaaatgcttgcattgtattcacattggagaagttcgacaaattaagtgtcatgccatggtattcgcaattgattcaacttatattacctgagacacgtgcgtactttgctagggtgctgagcaggccaattcaagctgacctctgatttaggttcatttttattctttgattagatgtagtatatgatgtaaattgtacaggaagtgggttttattccactcgtctctaattgcaagagttatgtgtcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0021K07.1" temp_strand="-" temp_description="C06HBa0021K07.1  AC209507.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0021K07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="10805" stop="7651"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10505" g_stop="10486" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="20" r_length="20" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10485" i_stop="9362" i_length="1124">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9361" g_stop="9298" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="84" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9297" i_stop="9217" i_length="81">
            <donor d_prob="0.030" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9216" g_stop="9137" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="164" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="9136" i_stop="8716" i_length="421">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8715" g_stop="8651" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="229" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8650" i_stop="8568" i_length="83">
            <donor d_prob="0.731" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="8567" g_stop="8450" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="347" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="8449" i_stop="8374" i_length="76">
            <donor d_prob="0.184" d_score="1.00"/>
            <acceptor a_prob="0.908" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="8373" g_stop="8249" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="472" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="8248" i_stop="8142" i_length="107">
            <donor d_prob="0.857" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="8141" g_stop="7952" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="662" r_length="190" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="663" polyA_stop="679"/>
      <MATCH_line gen_id="C06HBa0021K07.1" gen_strand="-" ref_id="SGN-U318033" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0021K07.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U318033" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10505" e_stop="10486"/>
          <exon e_start="9361" e_stop="9298"/>
          <exon e_start="9216" e_stop="9137"/>
          <exon e_start="8715" e_stop="8651"/>
          <exon e_start="8567" e_stop="8450"/>
          <exon e_start="8373" e_stop="8249"/>
          <exon e_start="8141" e_stop="7952"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCATCTCCTACACCTCAGGTTTGCTCCGCAGTTTAATGCTCATACTCTGGCAAAGTTTTTGTTCAGGTTTTTGGTTCTTAAGTTCTAACATGAGTAATACTAGTCTCTTGGTCATTTATGGGTCTTTATTTAGTTTTGCACTGTTACATGGTGCTTCTCATACCAAGTTAACACTAAGCTGTGTTTGTATTCTCATCGAGTATTTCGAAGATGCACGCTGAACCGTCTGATGTTCAAATTTAATCATTGATTGTGATAATTTGTGAAGCTTTTACCATTTACTTTATGAACACTTGTCAAACCAAGTTGTGCTAGTGTTACCTCAAGACTTGAAAGTTATAATGTAGCTGTCCTGCAAATTTAATACAATGTCAACTTTACCAACCATTTGAATTACTGCATAAAAACTCTGGGCGTACAGTTTCTTACCATATTGTAGTTCAGTTTGCTTCTCACATTGTGACCCTTGTGTTATATGCTGCTGTTTATACCAAGTTTATTATGAAAAAGCATCTTTTTAGAGTATGATATGCCTTTTATTTGTTCTTGGCATCTGTTATGCTGATGAGGGGTAGAAGACCTTAGAACCCTCTCTTGATATGCTAAATTTGCTTCACTGAGCATTATTTTTTTGGTTCTGGGAGGGTGTGTATACCAAGACTGGTATTCCTGTCAATCTCTTAATCTAGCCTATAACATTGTCAATTGTTCTATGGTCTTAGTAATACAAAACAGTTGAGTTCTGAAAACTTCACTTGCTGACCCTTAATCGCTGGCATGCTTGGTGTATTCTGAGAATCAATTAGGCAATATGAGGGCTTTTCTTATCCCTACATTTTGAGGATTTAGATTTTGTGAGTAACTCGTCTTCACTTTGGTGATCGTTTGAGGAGGGTTTACATGTTGACAGATTCCATAGGCTGTTTTCACCACAGTTTACTTGATGTTCACTTTCTTCACCAATTAACAATGTTGTCTGAGCTTTTCATGTTTGTTAGTTTGTATGTCTGCTTTCTGTCTTTTCTTTCTCAATTGACTTGTAGGTGGTTCATAACCATTCATGGTGCAGTAATTAGACAATGTATTTGATCCTATATTACATCTCTTTTCGTTATTTTCTCCTTGTGCATTTCTTTATGCAGGTCTATCTGGGTGAGCTGTATGTAAATAATTCTACGCTATCTGATGTGACATTTTTAGTCGAAGGTAGCAGCAGTTTTGTGATTCAAATCTTGTCATCTTTTTCATATCATGGTGTATCTTAATGATTTTTTGGTCCTTCACCAGGCAAACGGTTTTATGCCCACAGAATTTGTTTACTTGCTTCTTCTGATGCATTTCGCGCAATGTTTGATGGTGGCTACAGGGTAAGTAGAATAGTTGGCATAAAGATTTATTGCTTTTACTTTTAGGTTATTGGTTTCTAAATTGATCATTAGCAACACAAGATGAAAGCTGGTTTTGCTCCCAAATTTTGTCTTCTACTGCTTACCTTTCCCTTTAGACAAATTTAGATTGACTATCAAATGATTTTTGCAAAATTGCTAAAAGGCAAACATCTTTATTTGAAATGTTACAAGCATATGTGTCATGACAAATATGGCGTACAAAACTCTGATTACCTTTCCCTTTAGACAAATTTATATTGACTATCAAATGATTTTTGCAAAATTGCTTAAAGGCAAATATCTTTATTTGAAATGTTACAAGCATATTTGTCATGTGACATGACTGAATGCACAAATGTGGAGTACAAAACTCTGATGATCTGTTATATATTTATTGCAGGAGAGAGATGCCAAAGATATAGAGATTCCCAACATTCCATGGGATGTTTTTGAGTTGATGATGAGGTGCGCTGCTGTTTAATCTCTGTCACATCTGGGATACAAATCAATCTAGTAATATTGAAGACAGGAACGTTTATTGTTTGCAGGTACATATACACGGGATCTGTTGATGTTAATATGGGTGTTGCAAAGGATCTTCTAAGGGTTGCTGATCAATATCTTCTTGAGGGCCTTAAGCGTCTGTGCGAGTATGCAATTGCCCAGGTGAGTGCTGGGGACCTTTCTGTCTTAGAGGAGGATTTATGTCTGGTTTCTCCTAATAGTTTCTTATCTTTGGTAGGATATCTCAGTGGAAAATGTCTCTCTGATGTTTGAGTTATCAGAGGCTTTCAATGCATTGTCATTAAGAAATGCTTGCATTGTATTCACATTGGAGAAGTTCGACAAATTAAGTGTCATGCCATGGTGTGTCCAGATTCCTATCCTTTTGCTTCATCATTTCTTGGAATAAAAAAGACACGCTTAACAAACATGAATTGTGTATTAACACACTGTAATCTTGTTACATGTAGGTATTCGCAATTGATTCAACTTATATTACCTGAGACACGTGCGTACTTTGCTAGGGTGCTGAGCAGGCCAATTCAAGCTGACCTCTGATTTAGGTTCATTTTTATTCTTTGATTAGATGTAGTATATGATGTAAATTGTACAGGAAGTGGGTTTTATTCCACTCGTCTCTAATTGCAAGAGTTATGTGTC</genome_strand>
        <mrna_strand>CTCCATCTCCTACACCTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTATCTGGGTGAGCTGTATGTAAATAATTCTACGCTATCTGATGTGACATTTTTAGTCGAAG.................................................................................GCAAACGGTTTTATGCCCACAGAATTTGTTTACTTGCTTCTTCTGATGCATTTCGCGCAATGTTTGATGGTGGCTACAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGAGATGCCAAAGATATAGAGATTCCCAACATTCCATGGGATGTTTTTGAGTTGATGATGAG...................................................................................GTACATATACACGGGATCTGTTGATGTTAATATGGGTGTTGCAAAGGATCTTCTAAGGGTTGCTGATCAATATCTTCTTGAGGGCCTTAAGCGTCTGTGCGAGTATGCAATTGCCCAG............................................................................GATATCTCAGTGGAAAATGTCTCTCTGATGTTTGAGTTATCAGAGGCTTTCAATGCATTGTCATTAAGAAATGCTTGCATTGTATTCACATTGGAGAAGTTCGACAAATTAAGTGTCATGCCATG...........................................................................................................GTATTCGCAATTGATTCAACTTATATTACCTGAGACACGTGCGTACTTTGCTAGGGTGCTGAGCAGGCCAATTCAAGCTGACCTCTGATTTAGGTTCATTTTTATTCTTTGATTAGATGTAGTATATGATGTAAATTGTACAGGAAGTGGGTTTTATTCCACTCGTCTCTAATTGCAAGAGTTATGTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U339439" ref_strand="-" ref_description="SGN-U339439        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>aaacgtcgcggtgactcgaaaataattaattgatcaaatttnaacaaagttcaaaaaataaacgagttttaaaaagagtcgccacataattttaggaaaactaggaaaccaattattaatctacgaaaccaaattgattctaggtaaggggttaaagttattccgaagggaaggggttaggcatccttcggaatccacaaatgtggttcccaactgaattcattttttttcaaattgagtaagaatataaaataaacacatatcataaacacacaatacacacaataaaacaataattatcggcctaaagtttgcctaacgtcaatattcacaaaataacaaatgaaatataattcgaacattttcgaataatttcaaggaaatgcacctccaggtacctgtaaagacacttagtaaaagagttagtgtcaaaataatataaataaaaataaataactcaaataataactaaaatagaaatccgtcttattaacatgggagaccttggaaatcgacggtaatttcttcatcggccaatttcaacaactaaaatatataaacttaaattaaaattccatctttttaaattggggaggcctctaaacccgacggatatatttttatcggcccatttcaacaactaaaatatataaacttaaattaaaattccgtctttttaaaatggggaggcctctaaacccgacggataga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0021K07.1" temp_strand="+" temp_description="C06HBa0021K07.1  AC209507.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0021K07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="19006" stop="20404"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19293" g_stop="19886" g_length="594"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="590" r_length="590" r_score="0.921"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19887" i_stop="19984" i_length="98">
            <donor d_prob="0.000" d_score="0.86"/>
            <acceptor a_prob="0.722" a_score="0.83"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19985" g_stop="20104" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="711" r_length="121" r_score="0.900"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0021K07.1" gen_strand="+" ref_id="SGN-U339439" ref_strand="-">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0021K07.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U339439" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="19293" e_stop="19886"/>
          <exon e_start="19985" e_stop="20104"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACGTCGCGACAACTCGAAAAATAATTAATTGATTCAATTTTAACAAAATT-AAAAAATAAACGAGTTTTAAAAAAGAGTCGCCACCTAATTTTTTAGGAAAACTAGGAAACCAATTATTAATCTACGAAACCAAATTGATTCTTAGGTAAGGGGTTCAAGTTATTCCGAAGGGAAGGGGTTAGGCACCCTTCGGAATCCACAAATGTGGTTCCCGACTGAATTCATTTTTTTTTCAAATTGAGGAAAGATATAAAATAAACACATATAATAAACACACAATATACACAATAAAGCAATAATTATCGGCCTAAAGTTTGTCTAACGTCAATATTCACAAAATAATGAATGAAATACAATTCGAAC-TTTTCGAATAATTTCAATGAGAAGCACCTCCGGGTACCTGTAAAGACACTTAGTAAAAGAGTTATTGTCAAAATAATATAAATAAAAATAAATAACTCAAATAATAACTAAAATAAAAATCCGTCTTATTAACATGGGAGGCCTTGGAAATCGACGGTTATTTCTTCATCGGCCACTTTCAACATATAAAATATATAAACTTGAATTGAAATTCCGTCCTTTTAAAATGAGGAGGCCTCCAAAACCGACGGAGAGTTTTCTCATTGGCCATTTTAACAAAACAAATAATATGAACTTGGCTAAAAATTTCCGTATTTTTTTAAAAAGGGAAGACCTCTAAACCCGACGGATAGATTTTTCATCGG-CC-TTTCAACATATAAAATATATAAACTTGAATTAAAATTCCGTCTTTTTAAAATGGGGAGGCCTCTAAGCCCGACGGATAGA</genome_strand>
        <mrna_strand>AAACGTCGCGGTGACTCG-AAAATAATTAATTGATCAAATTTNAACAAAGTTCAAAAAATAAACGAGTTTT-AAAAAGAGTCGCCACATAATTTT--AGGAAAACTAGGAAACCAATTATTAATCTACGAAACCAAATTGATTC-TAGGTAAGGGGTTAAAGTTATTCCGAAGGGAAGGGGTTAGGCATCCTTCGGAATCCACAAATGTGGTTCCCAACTGAATTCA-TTTTTTTTCAAATTGAGTAAGAATATAAAATAAACACATATCATAAACACACAATACACACAATAAAACAATAATTATCGGCCTAAAGTTTGCCTAACGTCAATATTCACAAAATAACAAATGAAATATAATTCGAACATTTTCGAATAATTTCAAGGAAATGCACCTCCAGGTACCTGTAAAGACACTTAGTAAAAGAGTTAGTGTCAAAATAATATAAATAAAAATAAATAACTCAAATAATAACTAAAATAGAAATCCGTCTTATTAACATGGGAGACCTTGGAAATCGACGGTAATTTCTTCATCGGCCAATTTCAACAACTAAAATATATAAACTTAAATTAAAATTCCATCTTTTTAAATTG..................................................................................................GGGAGGCCTCTAAACCCGACGGATATATTTTT-ATCGGCCCATTTCAACAACTAAAATATATAAACTTAAATTAAAATTCCGTCTTTTTAAAATGGGGAGGCCTCTAAACCCGACGGATAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U341639" ref_strand="+" ref_description="SGN-U341639        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | copalyl diphosphate synthase / CPS / ent-kaurene synthetase A (GA1), identical to GI:571330 (PMID: 7994182); formerly called ent-kaurene synthetase A | chr4:1237767-1244813 REVERSE | Aliases: T5J8.9, T5J8_9(evalue: 0, score=817) genbank/nr: gi|6009478|dbj|BAA84918.1| copalyl diphosphate synthase [Lycopersicon esculentum](evalue: 0, score=1590)">
      <seq>atgtcgatctcagcttcttttttaagatttagcctcactgctcactatcaaccttctccttcttcttctccaccaaatcaacctttcaaattccttaaaagcaacagagaacatgttgaattcaatcgaattttgcaatgtcatgctgtttctagacgtcgtacaaaagattacaaagaggtgcaaagtggttcgttgccggttatcaagtgggacgacatagcagaggaagtggacgaggaaacacacacacttgaggtgtacgatccatcctccaacgaggaccatatcgatgctattcgatcgatgctaggatcaatgggagacggagaaataagcgtctcggcctatgacacagcatgggttgccatggtgaaagatgtgaaggggactgaaactcctcagttcccttcaagccttgagtggattgcgaacaatcagttggctgatggttcatggggtgacaactccattttcttggtttatgatcgtgtcatcaacacattggcttgtgttattgccttgaagtcatggaacttgcatcctgacaagattctacttggaatgtcgtttatgagagagaatttgagcaggattggtgatgagaatgcagagcacatgcctataggcttcgaagtggcatttccttcactcattgagattgctaaaaagttaggcttagattttccttatgattctcccgtcttgcaagacatctatgccagtagacaactaaagcttacaaggataccaaaggacatcatgcacaaagtccccacaactttactccacagtttggaaggaatgacagatttggactggcaaaagttgcttcaatttcagtgcactgatggctcttttctcttctctccatcttccaccgcatatgcacttatgcaaactcaagatcataattgtctcaattatctcaaaaatgctgtccacaaattcaacggcggagttccaaatgtgtatccagtggacctatttgaacatatttggaccgttgatcggttgcaaaggcttggaatttctcggtattttgagctaaaaataaaaaagtgcattgattactttagcaaatattggacaaataaaggaatctgctgggctagaaattccccagttcaagacattgatgacacggctatggcttttagacttttgcgcttgcatggctacgctgtttctgctgacgtattcaaacattttgagagcaaaggcgaatttttctgcttcgtggggcaatcaaatcaagcagtgacaggaatgtataatctttatagggcatctcatgtaatgttctcaggagagaaaatacttgaaaatgcaaaaatatccacttctaattatctaagagaaaaacgagctcaaaatcaactgctagacaagtggatcattactaaagatttacctggagaggtgggatatgcattagatgtgccatggtatgctagcctaccccgcctagaaacaaggttctttttagaacattatggtggtgaagatgacgtgtggattggcaaaacattgtacaggatgccattggttaacaatagcctatacctagagctagcgaaatcggactataacaattgccaagctttgcaccagttcgagtggagaagaattcgcaagtggtactacgaatgcgggctaagagagtttggattaagtgaaaaaaggttgttggttacgtactatttaggcagtgctagtatatttgaggcacaaaggtcgaccgagcgaatggcttgggtcaaaaccgcagctcttatggactgtgtgaggtcttgttttggctccccacaagtatctgcagctgcatttctttgcgaattcgcacactactctagcaccgctctgaattcgaggtacaacacagaagataggctcgttggggtcattcttggaaccctaaatcatctctcactgagtgccttattaacacatggcagagacatccatcactacttgcgtcatgcttgggaaaattggctactgacggtaggagaaggagaaggagaaggagaaggaggtgctgaactcataattcgcaccttaaatttgtgcagtgttcattggatatcggaggagatattgttgtcccatccaacttaccaaaagctattggaaattaccaatagagtttctcaccgactccgtctctacaagggacacagtgaaaagcaggtaggaatgttgacttttagtgaagaaatagaaggtgacatgcaacagctagcagagctcgtgctatctcattcagatgcttccgaattggatgccaatatcaaagacacttttctcactgttgccaaaagtttttactactcagcttattgtgatgatcgaacaattaactttcacatagccaaagtgctatttgaaagagtagtttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0021K07.1" temp_strand="+" temp_description="C06HBa0021K07.1  AC209507.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0021K07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="40756" stop="46256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41056" g_stop="41155" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="100" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41156" i_stop="41494" i_length="339">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41495" g_stop="41563" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="169" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41564" i_stop="41652" i_length="89">
            <donor d_prob="0.898" d_score="1.00"/>
            <acceptor a_prob="0.833" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41653" g_stop="41741" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="258" r_length="89" r_score="0.978"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="41742" i_stop="41855" i_length="114">
            <donor d_prob="0.875" d_score="0.96"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41856" g_stop="42159" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="562" r_length="304" r_score="0.997"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="42160" i_stop="42233" i_length="74">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="42234" g_stop="42417" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="563" r_stop="746" r_length="184" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="42418" i_stop="42769" i_length="352">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="42770" g_stop="42984" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="747" r_stop="961" r_length="215" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="42985" i_stop="43062" i_length="78">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="43063" g_stop="43183" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="962" r_stop="1082" r_length="121" r_score="0.967"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="43184" i_stop="43328" i_length="145">
            <donor d_prob="0.983" d_score="0.92"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="43329" g_stop="43441" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="1083" r_stop="1195" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="43442" i_stop="43634" i_length="193">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="43635" g_stop="43861" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="1196" r_stop="1422" r_length="227" r_score="0.996"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="43862" i_stop="43945" i_length="84">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="43946" g_stop="44061" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1423" r_stop="1538" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="44062" i_stop="44613" i_length="552">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="44614" g_stop="44712" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1539" r_stop="1637" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="44713" i_stop="44822" i_length="110">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="44823" g_stop="45059" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="1638" r_stop="1874" r_length="237" r_score="0.996"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="45060" i_stop="45128" i_length="69">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="45129" g_stop="45240" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="1875" r_stop="1986" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="45241" i_stop="45351" i_length="111">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="45352" g_stop="45540" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="1987" r_stop="2175" r_length="189" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="45541" i_stop="45728" i_length="188">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="45729" g_stop="45956" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="2176" r_stop="2403" r_length="228" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0021K07.1" gen_strand="+" ref_id="SGN-U341639" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>2403</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0021K07.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U341639" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41056" e_stop="41155"/>
          <exon e_start="41495" e_stop="41563"/>
          <exon e_start="41653" e_stop="41741"/>
          <exon e_start="41856" e_stop="42159"/>
          <exon e_start="42234" e_stop="42417"/>
          <exon e_start="42770" e_stop="42984"/>
          <exon e_start="43063" e_stop="43183"/>
          <exon e_start="43329" e_stop="43441"/>
          <exon e_start="43635" e_stop="43861"/>
          <exon e_start="43946" e_stop="44061"/>
          <exon e_start="44614" e_stop="44712"/>
          <exon e_start="44823" e_stop="45059"/>
          <exon e_start="45129" e_stop="45240"/>
          <exon e_start="45352" e_stop="45540"/>
          <exon e_start="45729" e_stop="45956"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGTCGATCTCAGCTTCTTTTTTAAGATTTAGCCTCACTGCTCACTATCAACCTTCTCCTTCTTCTTCTCCACCAAATCAACCTTTCAAATTCCTTAAAAGTAAGTTTTTCTTTTCTACTCTACTCCTTCTTCTTCTTCTTAAATTCTTTATTTAATTGACACATAAAAGTAAGTAGTCGTTTTCAACTTTAGTACTAGTCACAGTAGATGCACAATTTTTATATAAAAAAACTTTATATAACTCTCACGGTTTACTTTTTCTTATTCCTCTATTAAAAAATCAACATAATCTATCTGAAAGAGAGTTTGGAAATTTTCATGTTCAAACCAATTTTAGAATTCAAAATCTATAGTCATCTTTGTTCTTTTTTTGTTTTGTCTGATGCATCTATAGCGGAGTTTTTAAGGGAGGATTTTTTTTTTGTTCGTTTTATACAGGCAACAGAGAACATGTTGAATTCAATCGAATTTTGCAATGTCATGCTGTTTCTAGACGTCGTACAAAAGGTGATATAGTTGTAATTTTGTAAGCGATTTTTATAAACTTGTGAATTTAACAGTTGTTCTTTCACACCCCCAAAAAATTAAAATTACAGATTACAAAGAGGTGCAAAGTGGTTCGTTGCCGGTTATCAAGTGGGACGACATCGCAGAGGAAGTGGACGTGGAAACACACACACTTGAGGTTGTTGTTGAGGCCAAAATAGAAAAAATAATTTATTATTTTTTTTTAAATAAAAAAAATTACTTTTATTCGTTGAGTGTTTAATTAATCAACCTCACATAATTTGTGTAAAAGGTGTACGATCCATCCTCCAACGAGGACCATATCGATGCTATTCGATCGATGCTAGGATCAATGGGAGACGGAGAAATAAGCGTCTCGGCCTATGACACAGCATGGGTTGCCATGGTGAAAGATGTGAAGGGAACTGAAACTCCTCAGTTCCCTTCAAGCCTTGAGTGGATTGCGAACAATCAGTTGGCTGATGGTTCATGGGGTGACAACTCCATTTTCTTGGTTTATGATCGTGTCATCAACACATTGGCTTGTGTTATTGCCTTGAAGTCATGGAACTTGCATCCTGACAAGATTCTACTTGGTAATTACTAGCACTTGATGAATTTTATTCGTTGCTTCGATCGATGACTAACAATTTCGTATATTTGATTATAGGAATGTCGTTTATGAGAGAGAATTTGAGCAGGATTGGTGATGAGAATGCAGAGCACATGCCTATAGGCTTCGAAGTGGCATTTCCTTCACTCATTGAGATTGCTAAAAAGTTAGGCTTAGATTTTCCTTATGATTCTCCCGTCTTGCAAGACATCTATGCCAGTAGACAACTAAAGCTTACAAGGTAATAATACTCTTTATCACTTTTTTCTTTTGCTATCTAGTATTCATATTAAAACCTGACCAAATCTGTATTGGAAAATACTTCTAATCAAACTCAGAGCTAGCTAGAAACTGTTTTTAAGTTCACTTTTTTTTTACAATCAAATAACACATTAAGTTTTCATATGGAGAGGATCTCCATTACAAGAAAAAGTAGTTCATGAATTTATTATATGAATAATTTTTTTTTTAATTAACATATTTAGATTATAGTAGGGTAGTTAATTTTGGATACAAAAAGTTGAATTACTTTTACTTTGATTACCTTGTATGTGGATGTGAGTAATGATAACGTAACATGTGCGTGCTAATAGGATACCAAAGGACATCATGCACAAAGTCCCCACAACTTTACTCCACAGTTTGGAAGGAATGACAGATTTGGACTGGCAAAAGTTGCTTCAATTTCAGTGCACTGATGGCTCTTTTCTCTTCTCTCCATCTTCCACCGCATATGCACTTATGCAAACTCAAGATCATAATTGTCTCAATTATCTCAAAAATGCTGTCCACAAATTCAACGGCGGAGGTATATAAATATTACTCCTATATTATATTATATTATCAGTGTAATATTGATATTGAAATCGACTTATATGTTGTACAGTTCCAAATGTGTATCCAGTGGACCTATTTGAACATATTTGGACCGTTGATCGGTTGCAAAGGCTTGGAATTTCTCGGTATTTTGAGCTAGAAATAAAAGAGTGCATTGATTACGTTAGCAGGTATTATTACTGGAACTATTTTTTCTTTTAAAAAAATAAGTTAGAGAAATTCCATTTTTGTTTTTGGTTTCTTGTGCTAGTATTATTATTTTTTTATTCTTGTGCTAGTGGAATATAATAATAGTATATGTTTTTGTTTTTTAAGATATTGGACAAATAAAGGAATCTGCTGGGCTAGAAATTCCCCAGTTCAAGACATTGATGACACGGCTATGGCTTTTAGACTTTTGCGCTTGCATGGCTACGCTGTTTCTGCTGGTTAGTCATTATCTAGCGGAGTTTCCTACCACCTTTTGCTATTGTATTTTTTTAAAAGAACTATAAGTTGTATTTAAATTTTATTAATAAAAAAACACGTCATATAATGTATTATTAGTTACGTAGAAAATGAAACAAAAGTATATGCTATTGTAGTACTCATAATGTACTACTTGTTGTTGTCTTTTGTCAGACGTATTCAAACATTTTGAGAGCAAAGGCGAATTTTTCTGCTTCGTGGGGCAATCAAATCAAGCAGTGACAGGAATGTATAATCTTTATAGGGCATCTCATGTAATGTTCTCAGGAGAGAAAATACTTGAAAATGCAAAAATATTCACTTCTAATTATCTAAGAGAAAAACGAGCTCAAAATCAACTGCTAGACAAGTGGATCATTACTAAAGATTTACCTGGAGAGGTAGGTACCGGCAATTGAACTTATATTTCTATTTATTTTGTCACAATCGTTTGTTTTGATATTCTGCAACATTATATCTTACAGGTGGGATATGCATTAGATGTGCCATGGTATGCTAGCCTACCCCGCCTAGAAACAAGGTTCTTTTTAGAACATTATGGTGGTGAAGATGACGTGTGGATTGGCAAAACATTGTACAGGTACTTTCATTGATAAATCTTTATTAATTTTGCACAATAACCTCTTCTTCCACAAAAATAATATATGAATAGAGAGAATTTACACAATCATATACAGCAACTTTTAGTTATTATATAGTGGATAACCTATCTTATTTTAACTTATACATTGTTGTTATAAGAAGTCTATAAAAATGTGGTTTTAATTCTTAAAAGATGGTAGTTAGTGATAGATAATTGGAGCCCCACCATATATATAATAGTTGCAAAAGACGGCACACTCACCTTATGCCCGTCTCTTTGTTTGTTTGGTTTGGTTTCACTATCAATTTAAAATGAACACTCATGAATGATTGATTTATCTTTCAACAAATGAATACAACCAATAAATTATCATGAGAAATGGTGGGACCTTTTCAAAGGACAATAGAAAAAAATCAAAGTTTCTTGCTTTAAAAATAACATTGGATATACTGATGTGCTTTGTCGTCAGAATTCACTACACCTCCACGTTAGCCACCAAATAATCATTTTTGACCTTACGAACATATTTTTCGAATTAATGTGCTACAGGATGCCATTGGTTAACAATAGCCTATACCTAGAGCTAGCGAAATCGGACTATAACAATTGCCAAGCTTTGCACCAGTTCGAGTGGAGAAGAATTCGCAAGTAAGTTATCAATTTTATAGCGTGTGAAGTGACAAAAAAGTAATTCATGTTGCAACCGGTTAAATTACATTTAGTAAAGATTATTTATATTTATAGATGGGTACATGCAGGTGGTACTACGAATGCGGGCTAGGAGAGTTTGGATTAAGTGAAAAAAGGTTGTTGGTTACGTACTATTTAGGCAGTGCTAGTATATTTGAGGCACAAAGGTCGACCGAGCGAATGGCTTGGGTCAAAACCGCAGCTCTTATGGACTGTGTGAGGTCTTGTTTTGGCTCCCCACAAGTATCTGCAGCTGCATTTCTTTGCGAATTCGCACACTACTCTAGCACCGCTCTGAATTCGAGGTAACATTGATCATCTATATATTCTACAACATAAAAATAACGGTTGATTGATGATCATGGCAATGACAGGTACAACACAGAAGATAGGCTCGTTGGGGTCATTCTTGGAACCCTAAATCATCTCTCACTGAGTGCCTTATTAACACATGGCAGAGACATCCATCACTACTTGCGTCATGCTGTAAGTACTTATATATATTATATACTGCCTGCCTGCTTTATTAATTAATTACATGAAACAATTCACTAATTTGATGTGTGTGTCTCTCTCTCTCTCTATATATATATATAGTGGGAAAATTGGCTACTGACGGTAGGAGAAGGAGAAGGAGAAGGAGAAGGAGGTGCTGAACTCATAATTCGCACCTTAAATTTGTGCAGTGTTCATTGGATATCGGAGGAGATATTGTTGTCCCATCCAACTTACCAAAAGCTATTGGAAATTACCAATAGAGTTTCTCACCGACTCCGTCTCTACAAGGTTAGACACCAAATTAAATTACAATACATTTTTAATTTCTTCTTAAAAAACAATTTAGAAATCAGTCTCTATCTCTTAGCTATAATATATATAACTCTATTTGCTACAAATAATATAAGCCCTTTTATTATTAAAAAAGATAAATCTTTTGGTGGAGATATTATGTGGTGTAACTGCATATATTTCAGGGACACAGTGAAAAGCAGGTAGGAATGTTGACTTTTAGTGAAGAAATAGAAGGTGACATGCAACAGCTAGCAGAGCTCGTGCTATCTCATTCAGATGCTTCCGAATTGGATGCCAATATCAAAGACACTTTTCTCACTGTTGCCAAAAGTTTTTACTACTCAGCTTATTGTGATGATCGAACAATTAACTTTCACATAGCCAAAGTGCTATTTGAAAGAGTAGTTTAA</genome_strand>
        <mrna_strand>ATGTCGATCTCAGCTTCTTTTTTAAGATTTAGCCTCACTGCTCACTATCAACCTTCTCCTTCTTCTTCTCCACCAAATCAACCTTTCAAATTCCTTAAAA...................................................................................................................................................................................................................................................................................................................................................GCAACAGAGAACATGTTGAATTCAATCGAATTTTGCAATGTCATGCTGTTTCTAGACGTCGTACAAAAG.........................................................................................ATTACAAAGAGGTGCAAAGTGGTTCGTTGCCGGTTATCAAGTGGGACGACATAGCAGAGGAAGTGGACGAGGAAACACACACACTTGAG..................................................................................................................GTGTACGATCCATCCTCCAACGAGGACCATATCGATGCTATTCGATCGATGCTAGGATCAATGGGAGACGGAGAAATAAGCGTCTCGGCCTATGACACAGCATGGGTTGCCATGGTGAAAGATGTGAAGGGGACTGAAACTCCTCAGTTCCCTTCAAGCCTTGAGTGGATTGCGAACAATCAGTTGGCTGATGGTTCATGGGGTGACAACTCCATTTTCTTGGTTTATGATCGTGTCATCAACACATTGGCTTGTGTTATTGCCTTGAAGTCATGGAACTTGCATCCTGACAAGATTCTACTTG..........................................................................GAATGTCGTTTATGAGAGAGAATTTGAGCAGGATTGGTGATGAGAATGCAGAGCACATGCCTATAGGCTTCGAAGTGGCATTTCCTTCACTCATTGAGATTGCTAAAAAGTTAGGCTTAGATTTTCCTTATGATTCTCCCGTCTTGCAAGACATCTATGCCAGTAGACAACTAAAGCTTACAAG................................................................................................................................................................................................................................................................................................................................................................GATACCAAAGGACATCATGCACAAAGTCCCCACAACTTTACTCCACAGTTTGGAAGGAATGACAGATTTGGACTGGCAAAAGTTGCTTCAATTTCAGTGCACTGATGGCTCTTTTCTCTTCTCTCCATCTTCCACCGCATATGCACTTATGCAAACTCAAGATCATAATTGTCTCAATTATCTCAAAAATGCTGTCCACAAATTCAACGGCGGAG..............................................................................TTCCAAATGTGTATCCAGTGGACCTATTTGAACATATTTGGACCGTTGATCGGTTGCAAAGGCTTGGAATTTCTCGGTATTTTGAGCTAAAAATAAAAAAGTGCATTGATTACTTTAGCAA.................................................................................................................................................ATATTGGACAAATAAAGGAATCTGCTGGGCTAGAAATTCCCCAGTTCAAGACATTGATGACACGGCTATGGCTTTTAGACTTTTGCGCTTGCATGGCTACGCTGTTTCTGCTG.................................................................................................................................................................................................ACGTATTCAAACATTTTGAGAGCAAAGGCGAATTTTTCTGCTTCGTGGGGCAATCAAATCAAGCAGTGACAGGAATGTATAATCTTTATAGGGCATCTCATGTAATGTTCTCAGGAGAGAAAATACTTGAAAATGCAAAAATATCCACTTCTAATTATCTAAGAGAAAAACGAGCTCAAAATCAACTGCTAGACAAGTGGATCATTACTAAAGATTTACCTGGAGAG....................................................................................GTGGGATATGCATTAGATGTGCCATGGTATGCTAGCCTACCCCGCCTAGAAACAAGGTTCTTTTTAGAACATTATGGTGGTGAAGATGACGTGTGGATTGGCAAAACATTGTACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCCATTGGTTAACAATAGCCTATACCTAGAGCTAGCGAAATCGGACTATAACAATTGCCAAGCTTTGCACCAGTTCGAGTGGAGAAGAATTCGCAA..............................................................................................................GTGGTACTACGAATGCGGGCTAAGAGAGTTTGGATTAAGTGAAAAAAGGTTGTTGGTTACGTACTATTTAGGCAGTGCTAGTATATTTGAGGCACAAAGGTCGACCGAGCGAATGGCTTGGGTCAAAACCGCAGCTCTTATGGACTGTGTGAGGTCTTGTTTTGGCTCCCCACAAGTATCTGCAGCTGCATTTCTTTGCGAATTCGCACACTACTCTAGCACCGCTCTGAATTCGAG.....................................................................GTACAACACAGAAGATAGGCTCGTTGGGGTCATTCTTGGAACCCTAAATCATCTCTCACTGAGTGCCTTATTAACACATGGCAGAGACATCCATCACTACTTGCGTCATGCT...............................................................................................................TGGGAAAATTGGCTACTGACGGTAGGAGAAGGAGAAGGAGAAGGAGAAGGAGGTGCTGAACTCATAATTCGCACCTTAAATTTGTGCAGTGTTCATTGGATATCGGAGGAGATATTGTTGTCCCATCCAACTTACCAAAAGCTATTGGAAATTACCAATAGAGTTTCTCACCGACTCCGTCTCTACAAG............................................................................................................................................................................................GGACACAGTGAAAAGCAGGTAGGAATGTTGACTTTTAGTGAAGAAATAGAAGGTGACATGCAACAGCTAGCAGAGCTCGTGCTATCTCATTCAGATGCTTCCGAATTGGATGCCAATATCAAAGACACTTTTCTCACTGTTGCCAAAAGTTTTTACTACTCAGCTTATTGTGATGATCGAACAATTAACTTTCACATAGCCAAAGTGCTATTTGAAAGAGTAGTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313463" ref_strand="+" ref_description="SGN-U313463        Tomato 200607 #1 [39 ESTs aligned] arabidopsis/peptide: | Symbol: None | 40S ribosomal protein S24 (RPS24A), similar to ribosomal protein S19 GB:445612 (Solanum tuberosum) and similar to ribosomal protein S24 GB:4506703 (Homo sapiens) | chr3:1360888-1362301 FORWARD | Aliases: T9J14.13, T9J14_13(evalue: 5e-61, score=231) genbank/nr: gi|445612|prf||1909359A ribosomal protein S19(evalue: 2e-61, score=238)">
      <seq>aaaaaccctagaacaaagcctccatttttgcagagaaaagagcaaggtctctgaagaagagtgtgaattcagagcggaggcgccggagtgttttgcagaaaaaatggcggacaaggcagttaccattagaacaaggaagttcatgaccaatcgtctacttgcaaggaaacaattcattatcgatgttttgcatcctggaagggccaacgtttcaaaggccgagttgaaagagaaattgtcaaggatgtacgaggtgaaagatcccaatgcaatctttgtgtttaagttcaggacccattttggaggaggcaaatctactggttttggcttgatctatgattctgttgagaacgcaaagaaatatgagccaaagtacaggctgatcaggaatggattagacacaaaggttgagaaatctaggaagcagatgaaggagaggaagaatagagccaagaaaatacgcggtgtcaagaagactaaggcaggagatgccaagaagaaatgatctgctggtgatagttcctttaagccaaatgcagaaaacgttttccatgttatttatgtttctctggcaactcatgcagaatcctttcaattttggttgagtcactcaaattatatttgcatgtttatgtgttagtactcagaaacttagtgaatttgggagtgtaccgtttttctcaacattctccttattttataatcaccatttcaagtgctgcgacaaaaaaaaaaaaaaaaaaaaaaaaaaaaattgggggggggggccccccccccccccccccccgggggggggtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0021K07.1" temp_strand="+" temp_description="C06HBa0021K07.1  AC209507.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0021K07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="49656" stop="53161"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49956" g_stop="50055" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="100" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50056" i_stop="50164" i_length="109">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50165" g_stop="50239" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="175" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50240" i_stop="50356" i_length="117">
            <donor d_prob="0.824" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="50357" g_stop="50398" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="217" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50399" i_stop="51227" i_length="829">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51228" g_stop="51398" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="388" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51399" i_stop="52406" i_length="1008">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="52407" g_stop="52493" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="475" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="52494" i_stop="52600" i_length="107">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="52601" g_stop="52852" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="727" r_length="252" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0021K07.1" gen_strand="+" ref_id="SGN-U313463" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>727</cumulative_length_of_scored_exons>
        <coverage percentage="0.911" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0021K07.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U313463" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49956" e_stop="50055"/>
          <exon e_start="50165" e_stop="50239"/>
          <exon e_start="50357" e_stop="50398"/>
          <exon e_start="51228" e_stop="51398"/>
          <exon e_start="52407" e_stop="52493"/>
          <exon e_start="52601" e_stop="52852"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACCCTAGAACAAAGCCTCCATTTTTGCAGAGAAAAGAGCAAGGTCTCTGAAGAAGAGTGTGAATTCAGAGCGGAGGCGCCGGAGTGTTTTGCAGAAGTATAACATTTTCTATTAGTAAATAAGAAACTCTGTATTTGTATTACATAGATATTTTCGTATGTGGATTAAAAAATGCAATTAAATTTTAGTTGATTTCTGTTAACAGAAAATGGCGGACAAGGCAGTTACCATTAGAACAAGGAAGTTCATGACCAATCGTCTACTTGCAAGGAAACAATTCGTAAGTCTAAGACGCAATATCTAATACTAACATCAATTGCCGTGCTGCAGTGCATATCTAAAACTTCATATTTGCTGATCTGTTTTTATTTGTTCTAATGGCATGCCATTTTTTCAGATTATCGATGTTTTGCATCCTGGAAGGGCCAACGTTTCAAAGGTTCTGACATACAAACTTATTGGCTTTGTTTCCTTTATTTTTCTGATTGCCTTGCAAGTTCAGCTAATAAGTAGTCGTTAATACAATTATTGGTTATTAGAATGAAATGACATAAGATCATGTGGCTATTGAGTAGTCATATAGGCTGTCAACTTAGTCTCAGAAGCAAATGTGCTTATTTGATGCAAAATATATCTTCTTCCAAGCTCCTCTCTCCTCTAGAGTAAAAAGAAGCTTGAAAATAGTGCAACTTAGTAAGGGGTACAGTGCGGTATCCAACTAGAATATGATTATTACTTCCTCTGTCCCAATTTATGGGAAGGTGTTTAATAATGAAAATTAACTTTTGATACTTGTGCTCTTGAATAAGCCTTATATATTTGTGTGACCTTAAATCATCTCATTAAAAGTAAAATGAAAGGTTTAAGGTTGAATTATTATATAATATAGATATGTGTCATCCCTTGTATGATGGACTAAAAAGGAAAGAGTCTCACTTAAATTGGGATAGAGGGGGTAATTGATATGGGGAGAGAATGGTTGAGAACCAAGGTTCAAAATTTCTGTCCAAGGCTCCGAGCCTTGTTTGATATAAATATGTACCGGTACATGTGCTTGTGGGGAACGACAAATTGGTGATAGAGCTACTCATACCTATGCATGTTGGAGCTAATATGTACCTCGTGGAATTAGTTGAGGTGCGCCCAAACATGATTTGGTCTTCACGATTCCCAAAAAAATAGAGAGAGTGGTGCTAATCACTTATAGCTCATTTGATTGTTATATACCTTTGGTTTTAATCTCTTACCTGGTTAACCTTTCCTTGTAGGCCGAGTTGAAAGAGAAATTGTCAAGGATGTACGAGGTGAAAGATCCCAATGCAATCTTTGTGTTTAAGTTCAGGACCCATTTTGGAGGAGGCAAATCTACTGGTTTTGGCTTGATCTATGATTCTGTTGAGAACGCAAAGAAATATGAGCCAAAGTACAGGCTGATCAGGGTAAGAATCATTTCAGTGTTTTATTTTTTGCGTAGAATTCATCAAGTGAAGAAAGTCGTGTGATACCAATATTCCTTAATAAACTCATGTTTTATAAGTTCTGTAGATGGTAAGGAACTAATGTTCGCTTCATGGTTTATCATCTTTTGAATGGTTTTTGTAGTTTTAGTATCGTATCTTTAGACATGGTTTAGAATTTCACTTTGTTAACTTCAGTCTTTAAGCGATTATATGGAAACTATAGAAACAATCTTTCTTGTTTCTGAGGATTTATTTTTGCTAAGAGTTGCGATGGGTGCAAAGGTCTTACATCTAGTTCATCTCTTTGCTCCTTTTTTGTTATTTGTGCACAAACCATATTTTAGAGGAATTTGTAGCAAAAAATTATTGCATGGTATCTGTCAATTCAAATATCTTTATTCTAGATGAAGTTCAGTAAAATGTGCTTACAAGAAAAGATTAGATGGTAGTACAAGACTCGCATGTGCAGTTTCATCATTTCAGAAGTTGAGTGTCTTCCACAACTACGCTTAAATTATCCTTCTGTTCTTTTGATATCGAAAAGTAATTGCAAGCTGTAGGTCTACATTACTTTGAGTGCTGCTGTTGAAAAGACTGTTTGTTTGAGCTATGTTGTATTAAAGGCTATTAGACCATAAAGACGTTTGGTTCTATACCTAATCTCTTCCTCTTCCTCCGGTCTTACTTAGTAACATCTCTTCCTCCTGTCCTTCTCTTGCTCATTCAGTTGATTCTGGTTTTGTGTTGCATTTGTTGGTGTTGCTTTTTCTTTTGTATGTTTGTATCAGTGATCTGTTTTTAGTATTCTAGCTGTGCTAATTCAAGCACTCATCTTTAAGTAAAGTAGATGGTTGAGTTTATTGCTCCATTATGTTGAATGCACCTTCACTGTCGTCAGTGTTAAATTTGTGGGCTTAATGATTGAATTCGGCTATAATTTTTGTTGTGGCTAAAATAATTTGTATGACTATTGAAAAACACTTGCAGAATGGATTAGACACAAAGGTTGAGAAATCTAGGAAGCAGATGAAGGAGAGGAAGAATAGAGCCAAGAAAATACGCGGTGTCAAGAAGGTAATGATTTTTATTTTTGCATTTCCAGCTACAACATTGAGAGGTTCTTTTGATTTTGGTTCATTTATTTTATTCTTGTGCTGATGCTGGTTGCTAAATTTTTGCAGACTAAGGCAGGAGATGCCAAGAAGAAATGATCTGCTGGTGATAGTTCCTTTAAGCCAAATGCAGAAAACGTTTTCCATGTTATTTATGTTTCTCTGGCAACTCATGCAGAATCCTTTCAATTTTGGTTGAGTCACTCAAATTATATTTGCATGTTTATGTGTTAGTACTCAGAAACTTAGTGAATTTGGGAGTGTACCGTTTTTCTCAACATTCTCCTTATTTTATAATCACCATTTCAAGTGCTGCGACAA</genome_strand>
        <mrna_strand>AAAAACCCTAGAACAAAGCCTCCATTTTTGCAGAGAAAAGAGCAAGGTCTCTGAAGAAGAGTGTGAATTCAGAGCGGAGGCGCCGGAGTGTTTTGCAGAA.............................................................................................................AAAATGGCGGACAAGGCAGTTACCATTAGAACAAGGAAGTTCATGACCAATCGTCTACTTGCAAGGAAACAATTC.....................................................................................................................ATTATCGATGTTTTGCATCCTGGAAGGGCCAACGTTTCAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGAGTTGAAAGAGAAATTGTCAAGGATGTACGAGGTGAAAGATCCCAATGCAATCTTTGTGTTTAAGTTCAGGACCCATTTTGGAGGAGGCAAATCTACTGGTTTTGGCTTGATCTATGATTCTGTTGAGAACGCAAAGAAATATGAGCCAAAGTACAGGCTGATCAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGATTAGACACAAAGGTTGAGAAATCTAGGAAGCAGATGAAGGAGAGGAAGAATAGAGCCAAGAAAATACGCGGTGTCAAGAAG...........................................................................................................ACTAAGGCAGGAGATGCCAAGAAGAAATGATCTGCTGGTGATAGTTCCTTTAAGCCAAATGCAGAAAACGTTTTCCATGTTATTTATGTTTCTCTGGCAACTCATGCAGAATCCTTTCAATTTTGGTTGAGTCACTCAAATTATATTTGCATGTTTATGTGTTAGTACTCAGAAACTTAGTGAATTTGGGAGTGTACCGTTTTTCTCAACATTCTCCTTATTTTATAATCACCATTTCAAGTGCTGCGACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326849" ref_strand="+" ref_description="SGN-U326849        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, contains Pfam profile:PF00011 HSP20:Hsp20/alpha crystallin family | chr3:7977611-7978642 REVERSE | Aliases: F16J14.9(evalue: 3e-28, score=122) genbank/nr: hypothetical(evalue: 1e-27, score=126)">
      <seq>caggattcccactacagttgagtcctataactctctctctctctgcgcacaactatttcggttcgggtttaattctttcaccatgaaggttcatccagtaacaagtaacgttttgtctccggctaacggctcagtttgccggaaaaagaagctccggagactacctcatatttttgccaaggttctagaacttccttttcattccgattctgatgtttcaatccacgaaacttctgattcgttgcgatttgtcatcccaacagatgatgtcggcgataatattagagctcacatagttgagatctatccgggtgttactaagattgttatccgagctgataacgtttttgattcttcattggacctcgacttgtggcgatttcggcttccggccacaactctgccggaactggctagtgcccgttttagtgacggtgaattggtggtcacggtgcccaaaggggaggaggaagacgacggcgatatcgtccgagcaggtggttttgttctcgtacaataatcctcttttgtctcactcgattgtttttccaagttttagtttttttttagttaattgtggctggtcctgccaatgggatataatttgaatgtttgaattgaatgttagtttctctttagatgtatatatgatcatacatagttttcaatttatgtgttaatgttagtaggcactttattttgacttgttgcaattagaaagcaggtttccaagaaaattttacaaccaacaacaaattaatgactcttgttgcttttcaagtaactaactagttggccaccccagaagaagctttttgtaaaaccttgtcttttaatttattgagtttatagttcctcattcttagtctctttaggctgtacaatagctggattgtgtttcccgttcatacattattgaaataaaaaggatacccagcagcatattttaccaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0021K07.1" temp_strand="-" temp_description="C06HBa0021K07.1  AC209507.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0021K07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="54882" stop="53330"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54582" g_stop="53631" g_length="952"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="952" r_length="952" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="953" polyA_stop="978"/>
      <MATCH_line gen_id="C06HBa0021K07.1" gen_strand="-" ref_id="SGN-U326849" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>952</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0021K07.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U326849" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54582" e_stop="53631"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGATTCCCACTACAGTTGAGTCCTATAACTCTCTCTCTCTCTGCGCACAACTATTTCGGTTCGGGTTTAATTCTTTCACCATGAAGGTTCATCCAGTAACAAGTAACGTTTTGTCTCCGGCTAACGGCTCAGTTTGCCGGAAAAAGAAGCTCCGGAGACTACCTCATATTTTTGCCAAGGTTCTAGAACTTCCTTTTCATTCCGATTCTGATGTTTCAATCCACGAAACTTCTGATTCGTTGCGATTTGTCATCCCAACAGATGATGTCGGCGATAATATTAGAGCTCACATAGTTGAGATCTATCCGGGTGTTACTAAGATTGTTATCCGAGCTGATAACGTTTTTGATTCTTCATTGGACCTCGACTTGTGGCGATTTCGGCTTCCGGCCACAACTCTGCCGGAACTGGCTAGTGCCCGTTTTAGTGACGGTGAATTGGTGGTCACGGTGCCCAAAGGGGAGGAGGAAGACGACGGCGATATCGTCCGAGCAGGTGGTTTTGTTCTCGTACAATAATCCTCTTTTGTCTCACTCGATTGTTTTTCCAAGTTTTAGTTTTTTTTTAGTTAATTGTGGCTGGTCCTGCCAATGGGATATAATTTGAATGTTTGAATTGAATGTTAGTTTCTCTTTAGATGTATATATGATCATACATAGTTTTCAATTTATGTGTTAATGTTAGTAGGCACTTTATTTTGACTTGTTGCAATTAGAAAGCAGGTTTCCAAGAAAATTTTACAACCAACAACAAATTAATGACTCTTGTTGCTTTTCAAGTAACTAACTAGTTGGCCACCCCAGAAGAAGCTTTTTGTAAAACCTTGTCTTTTAATTTATTGAGTTTATAGTTCCTCATTCTTAGTCTCTTTAGGCTGTACAATAGCTGGATTGTGTTTCCCGTTCATACATTATTGAAATAAAAAGGATACCCAGCAGCATATTTTACCA</genome_strand>
        <mrna_strand>CAGGATTCCCACTACAGTTGAGTCCTATAACTCTCTCTCTCTCTGCGCACAACTATTTCGGTTCGGGTTTAATTCTTTCACCATGAAGGTTCATCCAGTAACAAGTAACGTTTTGTCTCCGGCTAACGGCTCAGTTTGCCGGAAAAAGAAGCTCCGGAGACTACCTCATATTTTTGCCAAGGTTCTAGAACTTCCTTTTCATTCCGATTCTGATGTTTCAATCCACGAAACTTCTGATTCGTTGCGATTTGTCATCCCAACAGATGATGTCGGCGATAATATTAGAGCTCACATAGTTGAGATCTATCCGGGTGTTACTAAGATTGTTATCCGAGCTGATAACGTTTTTGATTCTTCATTGGACCTCGACTTGTGGCGATTTCGGCTTCCGGCCACAACTCTGCCGGAACTGGCTAGTGCCCGTTTTAGTGACGGTGAATTGGTGGTCACGGTGCCCAAAGGGGAGGAGGAAGACGACGGCGATATCGTCCGAGCAGGTGGTTTTGTTCTCGTACAATAATCCTCTTTTGTCTCACTCGATTGTTTTTCCAAGTTTTAGTTTTTTTTTAGTTAATTGTGGCTGGTCCTGCCAATGGGATATAATTTGAATGTTTGAATTGAATGTTAGTTTCTCTTTAGATGTATATATGATCATACATAGTTTTCAATTTATGTGTTAATGTTAGTAGGCACTTTATTTTGACTTGTTGCAATTAGAAAGCAGGTTTCCAAGAAAATTTTACAACCAACAACAAATTAATGACTCTTGTTGCTTTTCAAGTAACTAACTAGTTGGCCACCCCAGAAGAAGCTTTTTGTAAAACCTTGTCTTTTAATTTATTGAGTTTATAGTTCCTCATTCTTAGTCTCTTTAGGCTGTACAATAGCTGGATTGTGTTTCCCGTTCATACATTATTGAAATAAAAAGGATACCCAGCAGCATATTTTACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326644" ref_strand="+" ref_description="SGN-U326644        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | sec23/sec24 transport family protein, contains Pfam domains PF04811: Sec23/Sec24 trunk domain, PF04815: Sec23/Sec24 helical domain and PF04810: Sec23/Sec24 zinc finger | chr3:16022608-16031241 REVERSE | Aliases: T22K7.20(evalue: 1e-165, score=580) genbank/nr: gi|18407762|ref|NP_566869.1| expressed protein [Arabidopsis thaliana](evalue: 8e-164, score=580)">
      <seq>acaatggctattgagtttgcggagtatcaggtctgtgttgacgtgtttctcacaacacaatcttatgtagacattgcctccatctcggtcattcctaggacgactggtgggcaggtgtactactatttccctttctctgctcttgctgatactgccaagctatacaatgatcttcgatggaatatcactaggccccaagggtttgaggcagtaatgcgtgtaagatgtagtcagggccttcaagttcaagagtattctggaaattactgtaaaagaattcctacagatgttgatctacctgcgattgactgtgacaaaacaattatggttacattgaaacatgatgacaaattgcaggatggttcagaatgttcttttcagtctgctgttctttacactaccattgatggccaaagaagaatccgagtgtcaactttggctctgccttgcacaactatgttgagtaatctatttcgatcagctgacttggacacccagtttgcttgcatcttaaagcaagctgccagtgaagtaccaactgctcctctctcacggataagagaacaagtgacaaacctttgcatcaatattctgcactcttaccgtaaattctgtgcgacagtgtcatcctcagggcaacttatccttcctgaggcacttaaacttcttcctctttacacattggctttggttaaaagcactggacttagagcagatggacagatcgatagtaggtccttctggataaattatgtttccccactctctactccattggcaatccctctggtctaccctagattgatagcaattcatgaatttgatactaaggagaatgatgattctcttattcccccttctattccactttccagtgaacacattactgacaatggtatctatcttctcgagaacggtgaggactgtttgatatatgttgggaactctgcagatcctaatgttatccgtcagctgctaggcatttcatctgtcgaggaaattcctgctcagtttgtcctgcagcagtatgacaatccactctctaagaagctcaacgacatcattaatgatattagacgccaaaggtgtaactatctccgcttaaaattatgcaaaaagggagattcatcaggcatgttatttctctcgcacatggtagaagacaagacacaaaatgggctttcatatgtcgagtttctagtacatatccatcgacatattcaaaataaaatggcttgagaaaatatccagttttgttcatgaattttgattatagagaagggggggggggggggggggaaaaatttttttctttaaaaaaaaagcaaaaagtttttccggggggggccccccccggggtttaaaaaatttttttttttttttgggggggccccgctccccaaaaggaggggcaaaaaaaaaagtttttttttttttttcccgggggagggggttttttataaaaaattttttctcggggggaaaagggaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0021K07.1" temp_strand="-" temp_description="C06HBa0021K07.1  AC209507.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0021K07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="62366" stop="56023"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62066" g_stop="62037" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62036" i_stop="61910" i_length="127">
            <donor d_prob="0.981" d_score="0.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61909" g_stop="61826" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="114" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="61825" i_stop="61653" i_length="173">
            <donor d_prob="0.519" d_score="1.00"/>
            <acceptor a_prob="0.598" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="61652" g_stop="61533" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="234" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="61532" i_stop="61437" i_length="96">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.876" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="61436" g_stop="61368" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="303" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="61367" i_stop="60828" i_length="540">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="60827" g_stop="60750" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="381" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="60749" i_stop="60583" i_length="167">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.799" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="60582" g_stop="60444" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="520" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="60443" i_stop="59820" i_length="624">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="59819" g_stop="59655" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="685" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="59654" i_stop="57840" i_length="1815">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="57839" g_stop="57694" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="686" r_stop="831" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="57693" i_stop="57547" i_length="147">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="57546" g_stop="57367" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="832" r_stop="1011" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="57366" i_stop="56904" i_length="463">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="56903" g_stop="56815" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1012" r_stop="1100" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="56814" i_stop="56674" i_length="141">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.948" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="56673" g_stop="56642" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1101" r_stop="1132" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="56641" i_stop="56484" i_length="158">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="56483" g_stop="56202" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="1133" r_stop="1418" r_length="286" r_score="0.794"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0021K07.1" gen_strand="-" ref_id="SGN-U326644" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>1414</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0021K07.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U326644" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62066" e_stop="62037"/>
          <exon e_start="61909" e_stop="61826"/>
          <exon e_start="61652" e_stop="61533"/>
          <exon e_start="61436" e_stop="61368"/>
          <exon e_start="60827" e_stop="60750"/>
          <exon e_start="60582" e_stop="60444"/>
          <exon e_start="59819" e_stop="59655"/>
          <exon e_start="57839" e_stop="57694"/>
          <exon e_start="57546" e_stop="57367"/>
          <exon e_start="56903" e_stop="56815"/>
          <exon e_start="56673" e_stop="56642"/>
          <exon e_start="56483" e_stop="56202"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAATGGCTATTGAGTTTGCGGAGTATCAGGTTAGTTTATCTGAAAAGCCTGTGGATGTATGATTTATTTAAGGACAAACAGGATGTTAAGAACCTGTTTTGGTCTTCTTATATTTATAATTGTTAACATCAATTGATTAGATTTCAACTGCTTCAGGTCTGTGTTGACGTGTTTCTCACAACACAATCTTATGTAGACATTGCCTCCATCTCGGTCATTCCTAGGACGACTGGTGGGCAGGTAACTGTGACGCTTGCTACTATTTTAGCTTGTCTCCCCTAGGGCCTCGGTTATGATGCACTAACTGTTCATGGAATTTATGAACAATCTTATTATGCAGCTTACTGTACATGTTCCCTCTTGATATTGTTACATCTAGGGTTGAGTCTTAAAGATGTTTTTGCTTCTGTCAGGTGTACTACTATTTCCCTTTCTCTGCTCTTGCTGATACTGCCAAGCTATACAATGATCTTCGATGGAATATCACTAGGCCCCAAGGGTTTGAGGCAGTAATGCGTGTAAGATGTAGTCAGGTATGCTCCCCAATTTTCGGGTCTTCCTTCTCTTTTCTTATAGGTACCATACCGGAAAGTTGAAGAACACTCATGCTGACCGTGTTCCATTTGCAGGGCCTTCAAGTTCAAGAGTATTCTGGAAATTACTGTAAAAGAATTCCTACAGATGTTGATCTACCTGCGGTTCGTCCCCTCTCCCCCCCCCCCCCCCCCCCAAGTTAGAAGCATCTACAGCACATTTCTTTGGCTAATACCAAATCTGGTGACATGTTTCATTACTTGTTTATAATATATGTTTTTATCCAGCATTTTTTCATATCAAGATGAAGCTTTTAAGTCATATTTTCAGATTGTCCATGGTCAAAATACCCAAATGTTTTGGGAGAACCTTATGAGTTGAAATTTGTCTCTAAAGGGCTTACGTTAATCTAAAAATCACATGTGTCGGTAAGGGATTTTAGTTCATGTTTTGAATGGAGACTATACTAGCATGGTTTTTTCTGTATGCATGTTTACACTGTTAATTCACCTTTTCCTGTGTGAATACTTGCTCTCAAAAAGTTTTCACACTGTTGTCCTTGTTGAAAGTGCTGGTTTGACAGACTTATGAATAAGGTTTGTTCATTTCTAAGTGTGCTTTCCCTTATGCAGATTGACCATGACAAAACAATTATGGTTACATTGAAACATGATTAATAAGGCGTGTTGCTTTCCCTTGTGCAGATTGACTGTGACAAAACAATTATGGTTACATTGAAACATGATGACAAATTGCAGGATGGTTCAGAATGTTCTTTTCAGGTACAAATTTATTTGAGTCTTCAGCAATGAGTTTTTGGTCAATCATTTTTGCCGTGTTTCTGTATGTCTAATTTTCCCTGCTGCTGCTGCTTCCACCTTTTTTACTTTTTTCTTCCCTGGTGCAATATGCTGGCCCCATTTACAAGAGATTGTTTCTGTGTTTCCAGTCTGCTGTTCTTTACACTACCATTGATGGCCAAAGAAGAATCCGAGTGTCAACTTTGGCTCTGCCTTGCACAACTATGTTGAGTAATCTATTTCGATCAGCTGACTTGGACACCCAGTTTGCTTGCATCTTAAAGCAAGGTAGAGGATACTATCTAATAATACACTGTGTCATATTCTTAAGTATAAGGATGACAGTTGCAGCCAAATCAGATATAAGATTGTGTATGGAGACATCGTACATGTCCATGGGTTAACATTGAATCTGATTGTTTCTGCAATGGTGCTCCTTTATAATTCCCGTAACTCTTGTTCTGCATATTTGGAACTGAATCTAGACAGAACTAACTTTGTGCTGATATTCTTTGCTGATGAAGAAGCTATATTTATCTCCCCTATCTCCTAAGATTAGCTGCACAAGATCCTGCATTGATGACCTTAACATCCTGCTTCTCTTTCAGTCTCTCGCTCTCTTTCAGAAGCAAATACTTTTGTTTTTTTTTCAATATTCCATCACACACACACTTGAAAGAAAAAAGATTCTCCTGGCCAGAAGCAAATATTTTGAAATTAGCTCTTTATAGCTTATTAATCGTGTTCTTGTGGTCGACATAATTACTATGACGAGTTGCCAAGTGGCCTGCTTGCTTTTGAAGTTTAATGTTATCTCATGCACTGTTGCTATTTCATTCTATTTTTCCCTTTTTCTCCTTGTTTATTATCTTAAAAGAGTAATCGTACTTATGGAATTTTTCGTGCATGCAGCTGCCAGTGAAGTACCAACTGCTCCTCTCTCACGGATAAGAGAACAAGTGACAAACCTTTGCATCAATATTCTGCACTCTTACCGTAAATTCTGTGCGACAGTGTCATCCTCAGGGCAACTTATCCTTCCTGAGGCACTTAAACTTCTTCCTCTTTACACATTGGGTATATCCTGCCTTCCTTTTTACAAGCCTTTTATTTCCAAATGTTTTGACAGTGATAGTTTTGTATATGCAGTGCAATTTTAAAAGCATTTTATTGCATTATTTCATTTTCTTTTCCATTTTATGTATTTAAGTTGACATATTGATCAAAATGCCTATTAACTTTTTCTTCCTCTATGTTCCACCTTGGTTTCCTTTTGTTGCTATTCTAAGATTGTAACTCAATGTATTTTATGAGTTGAATTATTCAGTGTATTATATGAGTTGAGTTAATGTAAATGATATGAAGGAAACTAGTGCCAAGTAAAACTAAATGAATGATCATCCATTCTTAGTATGTGCATTTTAGCTTCCGAATGCTTCCTACTGATAGTGCATATTGAATGACCGTCTCTGATTTTCTTTGTCACTACAAAGTACTGAGAGATCCCCTCATAATTTCCCCAAAGCGTAACCATGTGTGAATAAATTTTGAGCTAGTAGGGTTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGAATGCCGCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTCCCAACCTTGTTTCTGAGCATGAACGCCCGCAAGCCAACATGTTAGTTGAAGCATCAGGGCGATTAGCAGCATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCTATGGCGTAGGCCTAGTCCGTAGGCAGGACTTTTCAAGTCTCGGAAGGTTTCTTCAATCTGCATTCGCTTCGAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAACCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACCCAGCTTCTCAACGGATTTATACCATGGCACTTTAAAGCCAGCATCACTGACAATGAGCGGTGTGGTGTTACTCGGTAGAATGCTCGCAAGGTCGGCTAGAAATTGGTCATGAGCTTTCTTTGAACATTGCTCTGAAAGCGGGAACGCTTTCTCATAAAGAGTAACAGAACGACCGTGTAGTGCGACTGAAGCTCGCAATACCATAAGTCGTTTTTGCTCACGAATATCAGACCAGTCAACAAGTACAATGGGCATCGTATTGCCCGAACAGATAAAGCTAGCATGCCAACGGTATACAGCGAGTCGCTCTTTGTGGAGGTGACGATTACCTAACAATCGGTCGATTCGTTTGATGTTATGTTTTGTTCTCGCTTTGGTTGGCAGGTTACGGCCAAGTTCGGTAAGAGTGAGAGTTTTACAGTCAAGTAATGCGTGGCAAGCCAACGTTAAGCTGTTGAGTCGTTTTAAGTGTAATTCGGGGCAGAATTGGTAAAGAGAGTCGTGTAAAATATCGAGTTCGCACATCTTGTTGTCTGATTATTGATTTTTCGCGAAACCATTTGATCATATGACAAGATGTGTATCCACCTTAACTTAATGATTTTTACCAAAATCATTAGGGGATTCATCAGTACAAAGTACTTCTTGTGCAATCAATTATGTAAAAGCTATATTCTTATGAGTTTTCTTAATATTTCAGCTTTGGTTAAAAGCACTGGACTTAGAGCAGATGGACAGATCGATAGTAGGTCCTTCTGGATAAATTATGTTTCCCCACTCTCTACTCCATTGGCAATCCCTCTGGTCTACCCTAGATTGATAGCAATTCATGAATTTGATACTAAGGTAAGTACTTGTATTTATGGATTTTGTTTCTATTCTTTCTTTTGTTTTTCTAAGTCAAGTTGGTAGTTCGATTCATTTTCTTGATTCCCTTTAAACATTATTTTCGGATTACATTTCTTACATTTCATTCTGTATTTGAATTTGTAGGAGAATGATGATTCTCTTATTCCCCCTTCTATTCCACTTTCCAGTGAACACATTACTGACAATGGTATCTATCTTCTCGAGAACGGTGAGGACTGTTTGATATATGTTGGGAACTCTGCAGATCCTAATGTTATCCGTCAGCTGCTAGGCATTTCATCTGTCGAGGAAATTCCTGCTCAGGTAATTTTACATGTCTTCTGCTGTTGATTGGTGATATTTTTCCAAATGTATAAGTAGGTAAAAGATGGAAACACATTCTTACCACCCTTCTTACTAGGATTCTCATTTGATACATGTGGCTGAAACGTACATTTAATTTGTATTGATTGTTTTTGAATGGCTTTGGTTAAATTGTACAAATCCATGGTGGTCAGATGTGTCAGGCAGGTACTTTTGTCGCAAGCCAAAGTATGAGGCTTGCATTCAAACCACCTATATCCTGTTTGATGGGTTGTGCAATTTTATTCAACAGTCATCTTAAAAGTAACCTGTATTTTTTCTTATACCTTAGGCTCTTGGGTTCGTTAGGTTCTTGATTGACAAAACGGTCAAACGTTCCTCTTTTTCCATTGGTGAAGCTAAGAAATTACTTATTCTAATTTAGCTCCTCTTGCATAGATTCTGAATTTCCCTTTTCTCTCAGTTTGTCCTGCAGCAGTATGACAATCCACTCTCTAAGAAGCTCAACGACATCATTAATGATATTAGACGCCAAAGGTGTAACTATCTCCGGTATGATTCTTCTTTTTCTGTGTATTTGCTCCTACCTTTTAGGAGATGGTTCATCAATTACATTTCATTACTTAATGAATACAATGTGATGGGCACAAAATATGTCTAATTTCTGATATATTATCAATTTGATCTTGGCAGCTTAAAATTATGCAAAAAGGGAGATTCATCAGGTTTGTATCCAGTAACATATTTTTGCACTTCTATCCCCAATCTTAACATACATAAATTATTGGTCATTTTAAATCAATTTAACATTCTCCCTGCTCTTAGCTGCTTAGTGTTAACACTTGATATGAAATCTTGCAATGACCATGAATCTCTTTTTCAGGCATGTTATTTCTCTCGCACATGGTAGAAGACAAGACACAAAATGGGCTTTCATATGTCGAGTTTCTAGTACATATCCATCGACATATTCAAAATAAAATGGCTTGAGAAAATATCCAGTTTTGTTCATGAATTTTGATTATAGAGAA-----GGGGGGGGGGGGGTACAGATGTTTTCAGTATGAAGAGATGCAGATGAGCTTTCCAGGTGTGGCCCCATCCATGGCTTCAGAGCTATCTTAGTTTTTTT-GAGGTGCAGCGCATACTCAAAATGAACGGACAAAAA</genome_strand>
        <mrna_strand>ACAATGGCTATTGAGTTTGCGGAGTATCAG...............................................................................................................................GTCTGTGTTGACGTGTTTCTCACAACACAATCTTATGTAGACATTGCCTCCATCTCGGTCATTCCTAGGACGACTGGTGGGCAG.............................................................................................................................................................................GTGTACTACTATTTCCCTTTCTCTGCTCTTGCTGATACTGCCAAGCTATACAATGATCTTCGATGGAATATCACTAGGCCCCAAGGGTTTGAGGCAGTAATGCGTGTAAGATGTAGTCAG................................................................................................GGCCTTCAAGTTCAAGAGTATTCTGGAAATTACTGTAAAAGAATTCCTACAGATGTTGATCTACCTGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACTGTGACAAAACAATTATGGTTACATTGAAACATGATGACAAATTGCAGGATGGTTCAGAATGTTCTTTTCAG.......................................................................................................................................................................TCTGCTGTTCTTTACACTACCATTGATGGCCAAAGAAGAATCCGAGTGTCAACTTTGGCTCTGCCTTGCACAACTATGTTGAGTAATCTATTTCGATCAGCTGACTTGGACACCCAGTTTGCTTGCATCTTAAAGCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCAGTGAAGTACCAACTGCTCCTCTCTCACGGATAAGAGAACAAGTGACAAACCTTTGCATCAATATTCTGCACTCTTACCGTAAATTCTGTGCGACAGTGTCATCCTCAGGGCAACTTATCCTTCCTGAGGCACTTAAACTTCTTCCTCTTTACACATTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTTAAAAGCACTGGACTTAGAGCAGATGGACAGATCGATAGTAGGTCCTTCTGGATAAATTATGTTTCCCCACTCTCTACTCCATTGGCAATCCCTCTGGTCTACCCTAGATTGATAGCAATTCATGAATTTGATACTAAG...................................................................................................................................................GAGAATGATGATTCTCTTATTCCCCCTTCTATTCCACTTTCCAGTGAACACATTACTGACAATGGTATCTATCTTCTCGAGAACGGTGAGGACTGTTTGATATATGTTGGGAACTCTGCAGATCCTAATGTTATCCGTCAGCTGCTAGGCATTTCATCTGTCGAGGAAATTCCTGCTCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTCCTGCAGCAGTATGACAATCCACTCTCTAAGAAGCTCAACGACATCATTAATGATATTAGACGCCAAAGGTGTAACTATCTCCG.............................................................................................................................................CTTAAAATTATGCAAAAAGGGAGATTCATCAG..............................................................................................................................................................GCATGTTATTTCTCTCGCACATGGTAGAAGACAAGACACAAAATGGGCTTTCATATGTCGAGTTTCTAGTACATATCCATCGACATATTCAAAATAAAATGGCTTGAGAAAATATCCAGTTTTGTTCATGAATTTTGATTATAGAGAAGGGGGGGGGGGGGGGGGGGAAAAATTTTTTTCTTTAAAAAAAAAGCAAAAAGTTTTTCCGGGGGGGGCCCCCCCCGGGGTTTAAAAAATTTTTTTTTTTTTTTGGGGGGGCCCCGC-TCCCCAAAA-GGAGGGGCAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U344481" ref_strand="+" ref_description="SGN-U344481        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | sec23/sec24 transport family protein, contains Pfam domains PF04811: Sec23/Sec24 trunk domain, PF04815: Sec23/Sec24 helical domain and PF04810: Sec23/Sec24 zinc finger | chr3:16022608-16031241 REVERSE | Aliases: T22K7.20(evalue: 2e-115, score=412) genbank/nr: gi|18407762|ref|NP_566869.1| expressed protein [Arabidopsis thaliana](evalue: 2e-113, score=412)">
      <seq>gagtttgtcgctaccaaggagtatatggtgcgagatccaatgcctgctgtgtatttcttcctgatagacgtttccatgaatgccatacagactggtgcaactgcagctgcttgcagtgcaatcagccaagttatttctgatctccctgacggtcctcggacattggtcggagttgctacatttgactcaactatccacttctacaatctcaagcgtgcattgcagcagccattgatgcttatagtccctgatgtccaagatgtttacacccccctacagactgatgttatcgtgcagctctcggagtgccgtcaacacctagagcttcttctagaaagcatcccaacaatgttccagaacaacaggattgctgattcagcttttggagctgcagtcaaggctgctttcttggcaatgaaaagcactggaggcaaacttcttgtgtttcaatcagtcctgccatctactggtattggggccctttctgcaagagaggctgaaggaagaaccaatgtatcagctgcagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0021K07.1" temp_strand="-" temp_description="C06HBa0021K07.1  AC209507.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0021K07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="67378" stop="62615"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67078" g_stop="67052" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67051" i_stop="66742" i_length="310">
            <donor d_prob="0.489" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66741" g_stop="66622" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="147" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66621" i_stop="65429" i_length="1193">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65428" g_stop="65348" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="228" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65347" i_stop="64585" i_length="763">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.921" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="64584" g_stop="64507" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="306" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="64506" i_stop="64398" i_length="109">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="64397" g_stop="64305" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="399" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="64304" i_stop="63597" i_length="708">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="63596" g_stop="63542" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="400" r_stop="454" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="63541" i_stop="62990" i_length="552">
            <donor d_prob="0.679" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="62989" g_stop="62915" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="529" r_length="75" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0021K07.1" gen_strand="-" ref_id="SGN-U344481" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0021K07.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U344481" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67078" e_stop="67052"/>
          <exon e_start="66741" e_stop="66622"/>
          <exon e_start="65428" e_stop="65348"/>
          <exon e_start="64584" e_stop="64507"/>
          <exon e_start="64397" e_stop="64305"/>
          <exon e_start="63596" e_stop="63542"/>
          <exon e_start="62989" e_stop="62915"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTTTGTCGCTACCAAGGAGTATATGGTTGGTACCTTTTGGATACATTGGTTCAGGGATGTGATTGCATGACATTATAGGAGTAATGCAGTATTAAGTAGACATTCCGTGCTCTGAACTTTCAGTTCAGCTAGCTTTGGGCTTTCAAATTTACCATCTGAATTTGTTTGGGTATTTGGGGAAGCTAACCACAACAGAGTGGAACAAAAAAAAAATTATATTGCAATATCAAATAATTTGTAGATGCACTCCTTTCTTTGGTGTAGGGAATCCCTTAATTCGATTTTGTAACTTTTGGATTTTGCTGTAATAACTTGATATTTGTATCGTAATTCAGGTGCGAGATCCAATGCCTGCTGTGTATTTCTTCCTGATAGACGTTTCCATGAATGCCATACAGACTGGTGCAACTGCAGCTGCTTGCAGTGCAATCAGCCAAGTTATTTCTGATCTCCCTGTAAGTCCTATAGTTTGTTTATGATGATGCAACATGCATTTTTGTACCTTCAGATTAGAGAGAAAAGTATTTGGCTCGTCTTCTCGTGTGGAATCATCATAAATTAATTACATTCTCCTACTAAATCTGTGACATTAACTAGAACATCTGATGTAGGAAAGCAATTATCCATGTAATTTGTCCTTTGAGATGATGAGAAAGGTTATTGAGGCATCTGAATTGTGGAAAACCTAGTTTCTCCATTCAGAATAGTGCAGTGTTGCACTAATGTTGCTTGGTCACTTTGGTTTATCCAAGAGTTCATTGTGGAATATCTGTATTTAGTGGCTGTTGGCCCCAGGGGTGGGTGGTTGGGGGATGGATTAGGCAAAAAAGATGAAGAGATTATGATAACCTGCCAATTTGTATGAGTTCGTTGACAGCGTAAGGGTGATCCATCTCGATGACGAATTCCATGATACCAAGAAATCGAAATTAATCGTTCAATGTCTACTCGTTCTCCCCTCTTCAATTCCCAATGAACAGCATGATCTTGACCTATCATTTGTTCAATTTGGCCGATTTGATACTTAGTTAATTCTGTCACCTAGTCGATAACGAACCTGAATGGCTTTGGTTGAGGCAACTCTTACTTGTTCACCACCAACTAATATAGCTCCTGAAATATATAGCATTTTTAATCCTTCCTTTTGCTAGTCTTCTCGGCTGGAATCATAAAAAGGTTGTCTCCTCTTTCATGATCCTTTCTATAGGTAGAACTACTGTGAGCAGTATAAACTTCGACCCTTATTTTTTTCTTCATATTGTAAAGGGGAGCATTCTCCTTAAAACAATAGCTTGTAATAATTCCAGAAGGTAATAGGAAAATGAAGGATGTGACAAGAATTTAGGTGAACCCTTGAATGTCTTCAATTGAAGGGTTCTTTTTTCGGCATCTGGTGTTATTCTAGTTGCATGAACCATAGATTGATCTAGTAAGCAAATCAATCTATGATCTAATGGAACTCGTGAGAGATGGGATCATTCAAGTGGTTAGAATGATGCGTTCACTAGGAGGCATAGATTAGGGAATAGATACTATTTGTGATACAGTTCACTAAGAATTAAGATGCATTTCTATTCAATTTTGATGCACAATAGGAATTATTTAGAGTTTATGAGCTGTCTTTGACATTGAAAACTTATTATTGCAGGACGGTCCTCGGACATTGGTCGGAGTTGCTACATTTGACTCAACTATCCACTTCTACAATCTCAAGCGTGCATTGCAGCAGGTTTAACACATTCAAAGATGCTTTGATTCAGTGTTGTACCTTAATTAATTATCTTTACCTTTTTCTCTTTGTTGAGCTAATGATGAACTGACAATTACTTTTAAGGGAAAAGTGCAGTACTACTAGAATGATTATTGCTGGATTTCAGAAATGTGTTGCCTAGATGATTGTAAATGCATTTCTTAAAGAATTTCTGTAAGTGAATATAATAAAAATCTTTAACTAACTGAATGTTGCTCGGACTCTTAAAAAATGTCAATGGTGCGTCTAGGATCCTCCAAAAATAGCGCATTTTTGGAGGGTCCGACATCGGTGCGACAACATTTTTGGAGAGTCTTGAACAATATAGATGATGCAAACAGAGTTAGTAGTACTTAATAAACAAAGTGTTTTTCATCTAAAACAAAGAAATTATTCTTGTTTCCTTTTTCATTTGTCTTGACTTGTCTGTGATTTAAATCATGGTTTGCAGGAAGAAAGTTTTAGCCTTCAAAAATCGTACTTTGTAGTTTCAACTTCTCTGTCTAAATTTGCTGCTCATTCCCTTGCTGCATAATTGCTCCATTTTGCTTAATTATGCAGTTCTTTCATTCTTCTTCTATGGTATAGTTGGATTATATTTTACTTGTTCAGTGTTTCTCTGATTTCACTTGCTCATTTTTCTTTAATATGGATGCTTAAATGGGATTAGGGTTGTGGCAAACGATTTATGTTGATGAAGTGCTTGTTTTCTGATAAGTTGATTCTGGATCTACCTATGCAGCCATTGATGCTTATAGTCCCTGATGTCCAAGATGTTTACACCCCCCTACAGACTGATGTTATCGTGCAGCTCTCGGAGGTTAGTTCTGCAAGATGTTGACCATTTTTTATCATGTTCCCCTTATTAAAAGCAGAATGAGTAGGATCATCAGTGAGTCCTATGAGTTGTTACTTGTTTGTGTTTTCAGTGCCGTCAACACCTAGAGCTTCTTCTAGAAAGCATCCCAACAATGTTCCAGAACAACAGGATTGCTGATTCAGCTTTTGGAGCTGCAGTCAAGGTATCAGTGCTTTACATAAAGTTAGTTTCCCACTTGTTTTGTATTCCAAGTTGTTATTTCTGTTATAAATCCACTTGTTTTGTATTGCTTTGTTAAAAATAGAGTAAGTATTTTCTGCGTTCCTTCTAGAACGTGAGTAATTAGGTCAACACAGTTGCCTGAGGCTTTGCCATTCTGAGAAAAAGATTGGAATTATTTAGTGTTATGTCTCTACAGGCAGATGCAGGGGCAGACCCAACCTTACAGTAACAAATTCATCTAAACCCGATAGTTTTGACTCGAAGCATAAATTTATGTGTAAAAATTGACTAAGATTGCAGTAAACGGTAGATATAAAGCCATAACTTCAAAAATATTGATGCACCCAAGGGAATGACGTAGTGGTCAATGAAGTGGCTTGGGAACCATGAGTTCTAGCCTTGTTGAACTGAGTTACCTGATGCATGTTGTTGCTGGTGGGAGGTGACAACTGACAGGTTTCCCATGGAATTAGTCGAGGTGTGAGTAAGTTGGCACAGACACCATGGTCATCAAAAAAGAAACTTTGAAAATATTAATGAGCTCAATGCTAGGAACTTAAAGGTTGAACCCATAGAATTTAAATTAGGAATTCGCCTCCATGCAGTTGAGTGATTGCAAGTCTAACTTTAACAGTCTATGATGGATTATCATATTGATCGACTCTTACTTCTAGTTTTGTTACTTCAGGCTGCTTTCTTGGCAATGAAAAGCACTGGAGGCAAACTTCTTGTGTTTCAATCAGGTAAGGTGCTAAGTGCTGGAGCTTTAAGTAATGTACAAGTTCAAGCTTGTGCATCTAAAATCAACTGTATCTTGTCTGTATGCTTGCATTAAAACATCTTTTATCTTTGATCCCTCACTTTCAATGACAATGTACTGCTGATTGATTGACTGTGTTTGCTTTTATTTATTTATGCTTAATTTTTGTTTCCGATGCGATATGCCTAAATAGGATGGTACATAATAGGATTGGTTTCTATGGCATGGTCTGGTTCTTTTAAAATTGAAGCATTTCTAGGATAGCTATGTTTATATTATTATATTTTCAGTAAATTCCTGTTATGAAACTTCCCGTCAAGTATCTGGACCAAATACTTTGTAATAGAGAAGCATGCCTTAAGAAATTGCCTTATAATTCCTCTTTTCTTCTTCACCTGGTGCATCAACAAGTTCATAGGTCTTGTAATATACTTCCTGTAAATGATCTGTTGCATGAGCTGTGCAATCTTGAGACCTTGACTACACAAGTTGTGATACGATTCTAAGTGTTGGCTATACTTGCTATTTTTTATAGTCCTGCCATCTACTGGTATTGGGGCCCTTTCTGCAAGAGAGGCTGAAGGAAGAACCAATGTATCAGCTGCAGAAA</genome_strand>
        <mrna_strand>GAGTTTGTCGCTACCAAGGAGTATATG......................................................................................................................................................................................................................................................................................................................GTGCGAGATCCAATGCCTGCTGTGTATTTCTTCCTGATAGACGTTTCCATGAATGCCATACAGACTGGTGCAACTGCAGCTGCTTGCAGTGCAATCAGCCAAGTTATTTCTGATCTCCCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGGTCCTCGGACATTGGTCGGAGTTGCTACATTTGACTCAACTATCCACTTCTACAATCTCAAGCGTGCATTGCAGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATTGATGCTTATAGTCCCTGATGTCCAAGATGTTTACACCCCCCTACAGACTGATGTTATCGTGCAGCTCTCGGAG.............................................................................................................TGCCGTCAACACCTAGAGCTTCTTCTAGAAAGCATCCCAACAATGTTCCAGAACAACAGGATTGCTGATTCAGCTTTTGGAGCTGCAGTCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTTTCTTGGCAATGAAAAGCACTGGAGGCAAACTTCTTGTGTTTCAATCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGCCATCTACTGGTATTGGGGCCCTTTCTGCAAGAGAGGCTGAAGGAAGAACCAATGTATCAGCTGCAGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U325207" ref_strand="+" ref_description="SGN-U325207        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr4:1202170-1202787 REVERSE | Aliases: None(evalue: 2e-06, score=49.7) genbank/nr: gi|22328251|ref|NP_680565.1| expressed protein [Arabidopsis thaliana] gi|22531271|gb|AAM97139.1| unknown protein [Arabidopsis thaliana] gi|26451580|dbj|BAC42887.1| unknown protein [Arabidopsis thaliana](evalue: 0.0001, score=49.7)">
      <seq>aaccataaaaaccaagtacagtaatatctactgcgcatttcgtttctttgcttattagaataaggagaaaaatctcatcataaatcacccttttcagcactctgcttcagtatatactttctgacatcagaaactgaagggtggagtggtgattgtggatatatttttcatagacgtgcgtgttgaagaatagtttggattcagtgatagttattttgatttcctggtaacctattgtttgagaaaatttttaggatctacagtcattcagcagtatggatctttgaacactgttgtttctgcttagattttcaggcttgtcgatcagatagtgagttatagtggaatttgatcgaatcggttattggctctgttgaaaatgattgttgttcctcagcatcgggatcaaaactatttggaaagtagggcacatggccctactcgatttgggtcatttggttcacctccctctggtgggttcatggaggtaaattgtcgggcttttgagtccagggcaggtttatatcataccaaatcgaagtcttgcaagaaacctgtcatcaaacgggccctcacgggttccttatctcccaaaacgcgaccacctttaacatcactgcctgttaatactgtcaagtctcattctgaagatcaaaagaaatcaggaaaaacagcccaaaatttcatggtttcgataccatttaacctcaaagtggatgtaggttctaggaatgagggttccttgaatgatgagttaccgttttctgaactatgggctgggccagcgtattcaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0021K07.1" temp_strand="+" temp_description="C06HBa0021K07.1  AC209507.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0021K07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77725" stop="79358"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78025" g_stop="78154" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="130" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78155" i_stop="78392" i_length="238">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78393" g_stop="79058" g_length="666"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="796" r_length="666" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0021K07.1" gen_strand="+" ref_id="SGN-U325207" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>796</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0021K07.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U325207" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78025" e_stop="78154"/>
          <exon e_start="78393" e_stop="79058"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCATAAAAACCAAGTACAGTAATATCTACTGCGCATTTCGTTTCTTTGCTTATTAGAATAAGGAGAAAAATCTCATCATAAATCACCCTTTTCAGCACTCTGCTTCAGTATATACTTTCTGACATCAGGTAATTTTCTCAATCTTTACTGGAAAATGAAATTTAGAACTTTGATTTGTGTGAAGTTGGTACAATTCTTTGATTTTTACATATGAAGCGGAATGAATTTAACCCTGAAATTGTATTATATGATGCTAGACTTTTTTTGCACTTTTTGTTCTGGGTGTTTCCATTTTGAGTTATTGATTTGTTTGATCTCATGTAACTTGACTGATGTCTTTTTCTTTTTGCTTGTTTTTTGTTGAAGAAACTGAAGGGTGGAGTGGTGATTGTGGATATATTTTTCATAGACGTGCGTGTTGAAGAATAGTTTGGATTCAGTGATAGTTATTTTGATTTCCTGGTAACCTATTGTTTGAGAAAATTTTTAGGATCTACAGTCATTCAGCAGTATGGATCTTTGAACACTGTTGTTTCTGCTTAGATTTTCAGGCTTGTCGATCAGATAGTGAGTTATAGTGGAATTTGATCGAATCGGTTATTGGCTCTGTTGAAAATGATTGTTGTTCCTCAGCATCGGGATCAAAACTATTTGGAAAGTAGGGCACATGGCCCTACTCGATTTGGGTCATTTGGTTCACCTCCCTCTGGTGGGTTCATGGAGGTAAATTGTCGGGCTTTTGAGTCCAGGGCAGGTTTATATCATACCAAATCGAAGTCTTGCAAGAAACCTGTCATCAAACGGGCCCTCACGGGTTCCTTATCTCCCAAAACGCGACCACCTTTAACATCACTGCCTGTTAATACTGTCAAGTCTCATTCTGAAGATCAAAAGAAATCAGGAAAAACAGCCCAAAATTTCATGGTTTCGATACCATTTAACCTCAAAGTGGATGTAGGTTCTAGGAATGAGGGTTCCTTGAATGATGAGTTACCGTTTTCTGAACTATGGGCTGGGCCAGCGTATTCAAAT</genome_strand>
        <mrna_strand>AACCATAAAAACCAAGTACAGTAATATCTACTGCGCATTTCGTTTCTTTGCTTATTAGAATAAGGAGAAAAATCTCATCATAAATCACCCTTTTCAGCACTCTGCTTCAGTATATACTTTCTGACATCAG..............................................................................................................................................................................................................................................AAACTGAAGGGTGGAGTGGTGATTGTGGATATATTTTTCATAGACGTGCGTGTTGAAGAATAGTTTGGATTCAGTGATAGTTATTTTGATTTCCTGGTAACCTATTGTTTGAGAAAATTTTTAGGATCTACAGTCATTCAGCAGTATGGATCTTTGAACACTGTTGTTTCTGCTTAGATTTTCAGGCTTGTCGATCAGATAGTGAGTTATAGTGGAATTTGATCGAATCGGTTATTGGCTCTGTTGAAAATGATTGTTGTTCCTCAGCATCGGGATCAAAACTATTTGGAAAGTAGGGCACATGGCCCTACTCGATTTGGGTCATTTGGTTCACCTCCCTCTGGTGGGTTCATGGAGGTAAATTGTCGGGCTTTTGAGTCCAGGGCAGGTTTATATCATACCAAATCGAAGTCTTGCAAGAAACCTGTCATCAAACGGGCCCTCACGGGTTCCTTATCTCCCAAAACGCGACCACCTTTAACATCACTGCCTGTTAATACTGTCAAGTCTCATTCTGAAGATCAAAAGAAATCAGGAAAAACAGCCCAAAATTTCATGGTTTCGATACCATTTAACCTCAAAGTGGATGTAGGTTCTAGGAATGAGGGTTCCTTGAATGATGAGTTACCGTTTTCTGAACTATGGGCTGGGCCAGCGTATTCAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U321422" ref_strand="+" ref_description="SGN-U321422        Tomato 200607 #1 [9 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr4:1202170-1202787 REVERSE | Aliases: None(evalue: 6e-07, score=52.8) genbank/nr: hypothetical(evalue: 2e-09, score=67)">
      <seq>ttttttctcaggcctaaaaggaatgcctctcttgagtttcctacttcagcatgtgatattcatttacgtcccattgccaagtctgcaccagcatctccaaccagggagagcagtctttctccgggaattgtgtttgacaatactgactcagtgacacagactcttcgtcgcatgctcaaccttgaaactaatgcccaaattctccttgaaactaatgatggatgaatgtgtggtgggagttctgaatagcagttaactagggtattatttagttttcgtattgggtaatagtagatagttcgtatggtgaataattcagtttttagttagtaagttactgtttcgcttagtgtttgtcatggtagatcagtagtgaagttgcaacatctgtcaagattggttattttaaggggaattcaatatgaacaatggctagttgatcgatactctcctggtatattcaaagttcgtgcagtcatggttagactatgaggggttcaacaaatggagtatgtttgtgcatcgaacagtggaagaagaatctgagtgatgagtgagatgctcctattacattacagtaatagatagcttgtagttctttgtagaggttgcgtaacttgttgctcaactatctttgctgccctggagatgaatttgttataaccatcaattgtcattcttgattccagtgtcgtgggattgtttattgcctcttcatgttcttttgatgttctgtaaatcggagatattgtatatatcttagaccctaccagattagcatccctttagacttctggtttattcagttactagatcttagccttttcatccaattctgcatcctaaccatctctatttcttagtagattcaaattcttgactaggaaataggacatttggtatatctaagtccttgctattccttgaatgcctgaatgggctggtcatcatcataactttgtatgtattctcttctcaactctgaataggatatatgtcctacttcttcctcttgaagttgtttccccttgaccaattttctgttttttgggaatgaaaattgggtagggaaattattagtcagttgtatccttttctgttcctggtattcgtatcttcccttttagctttccttttgccagtccaattatgctagttaagaggtttattccttcaccaaaaagaaaatcatcttgcctaaggagattggtgatcactagctactgataagcgcttttagttggagctgttggaagaagattgttgagcggttgttctccctactctctactctcgccatggtagcactactcgttatatgtcatttcagtgtctctataagatgttgtctgtaggtcattcgaccaaactggtagttactactgcagtaattatctagttatgtcatgttttaggttttggagttttacttttgttgttgaacttgttgattttaaggtggcattttgattacgacttcaaaaaaaaaaaaaaaaaaactcgaggggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0021K07.1" temp_strand="+" temp_description="C06HBa0021K07.1  AC209507.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0021K07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="78792" stop="96526"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79092" g_stop="80322" g_length="1231"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1231" r_length="1231" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80323" i_stop="80443" i_length="121">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80444" g_stop="80697" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="1232" r_stop="1485" r_length="254" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80698" i_stop="81349" i_length="652">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.415" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81350" g_stop="81375" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="1486" r_stop="1511" r_length="26" r_score="0.500"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0021K07.1" gen_strand="+" ref_id="SGN-U321422" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1511</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0021K07.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U321422" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79092" e_stop="80322"/>
          <exon e_start="80444" e_stop="80697"/>
          <exon e_start="81350" e_stop="81375"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTTCTCAGGCCTAAAAGGAATGCCTCTCTTGAGTTTCCTACTTCAGCATGTGATATTCATTTACGTCCCATTGCCAAGTCTGCACCAGCATCTCCAACCAGGGAGAGCAGTCTTTCTCCGGGAATTGTGTTTGACAATACTGACTCAGTGACACAGACTCTTCGTCGCATGCTCAACCTTGAAACTAATGCCCAAATTCTCCTTGAAACTAATGATGGATGAATGTGTGGTGGGAGTTCTGAATAGCAGTTAACTAGGGTATTATTTAGTTTTCGTATTGGGTAATAGTAGATAGTTCGTATGGTGAATAATTCAGTTTTTAGTTAGTAAGTTACTGTTTCGCTTAGTGTTTGTCATGGTAGATCAGTAGTGAAGTTGCAACATCTGTCAAGATTGGTTATTTTAAGGGGAATTCAATATGAACAATGGCTAGTTGATCGATACTCTCCTGGTATATTCAAAGTTCGTGCAGTCATGGTTAGACTATGAGGGGTTCAACAAATGGAGTATGTTTGTGCATCGAACAGTGGAAGAAGAATCTGAGTGATGAGTGAGATGCTCCTATTACATTACAGTAATAGATAGCTTGTAGTTCTTTGTAGAGGTTGCGTAACTTGTTGCTCAACTATCTTTGCTGCCCTGGAGATGAATTTGTTATAACCATCAATTGTCATTCTTGATTCCAGTGTCGTGGGATTGTTTATTGCCTCTTCATGTTCTTTTGATGTTCTGTAAATCGGAGATATTGTATATATCTTAGACCCTACCAGATTAGCATCCCTTTAGACTTCTGGTTTATTCAGTTACTAGATCTTAGCCTTTTCATCCAATTCTGCATCCTAACCATCTCTATTTCTTAGTAGATTCAAATTCTTGACTAGGAAATAGGACATTTGGTATATCTAAGTCCTTGCTATTCCTTGAATGCCTGAATGGGCTGGTCATCATCATAACTTTGTATGTATTCTCTTCTCAACTCTGAATAGGATATATGTCCTACTTCTTCCTCTTGAAGTTGTTTCCCCTTGACCAATTTTCTGTTTTTTGGGAATGAAAATTGGGTAGGGAAATTATTAGTCAGTTGTATCCTTTTCTGTTCCTGGTATTCGTATCTTCCCTTTTAGCTTTCCTTTTGCCAGTCCAATTATGCTAGTTAAGAGGTTTATTCCTTCACCAAAAAGAAAATCATCTTGCCTAAGGAGATTGGTGATCACTAGCTACTGATAAGGTAAGACTTCCTAAGTCTTTTTTTTAATTATCTATTTTGATGTTGTCTGTAACTTGGTATCTAGCTACATGTGCTACAGTTTATGCTTATATTTGAAGTTTTTTTCTTCTTTTCTGTGTAGCGCTTTTAGTTGGAGCTGTTGGAAGAAGATTGTTGAGCGGTTGTTCTCCCTACTCTCTACTCTCGCCATGGTAGCACTACTCGTTATATGTCATTTCAGTGTCTCTATAAGATGTTGTCTGTAGGTCATTCGACCAAACTGGTAGTTACTACTGCAGTAATTATCTAGTTATGTCATGTTTTAGGTTTTGGAGTTTTACTTTTGTTGTTGAACTTGTTGATTTTAAGGTGGCATTTTGATTACGACTTCAATTATGTTCCTTTGCTTCTGTTGTTTGTCTCGAAGTCTATACTGTTACTAATGGAGTACCTATTTTGGTTATCAGATGCTGCTTATGTGTAGTTGGTAAATGCAAAAGCATCGTTGGTATTGGAACAACTAAAGAAAATGCACGTCATATCTACTGATTTCTTTGCTAGTTTTTATCTCAAATCTTTAGTCATGATACATTTAAAACAATGTGTTCAAGTTTGAACAAGATGAGAGCAGTTCATCTGTCTTTTACCAGTAGTGAATGTATGCACTTCGTCGATGTTAGCACATATCGTATGCAAAAGCTAATATTACTACTCCAATGCTTAAATTTGTTCGTCTCTTTTGGACCACATAACATCTTTATGACTATAAGATAAAAAAAATATTTGGTAAAACTACAAGATTCAATGTTCTTTTAGTTTCCTGTCAAGTCATAACTCAATCAATAAATTAAGACGGAGTATTATTTCACTCTTCTTGATGATGACACTTGAGCCCAAAATGTGGTACACACCCCATCATGCAACACGCATTACAAAACTGATTTTGTCATACATAGAGCATTTTCTACCAACTAGTTTGTTTGTTTATTTGTGCACGTAATTTAGAGAGGACAACTATATGGAGTATCATATTCATATGTGCATGCAGAATTAACACAACCACCTGATTGTCGA</genome_strand>
        <mrna_strand>TTTTTTCTCAGGCCTAAAAGGAATGCCTCTCTTGAGTTTCCTACTTCAGCATGTGATATTCATTTACGTCCCATTGCCAAGTCTGCACCAGCATCTCCAACCAGGGAGAGCAGTCTTTCTCCGGGAATTGTGTTTGACAATACTGACTCAGTGACACAGACTCTTCGTCGCATGCTCAACCTTGAAACTAATGCCCAAATTCTCCTTGAAACTAATGATGGATGAATGTGTGGTGGGAGTTCTGAATAGCAGTTAACTAGGGTATTATTTAGTTTTCGTATTGGGTAATAGTAGATAGTTCGTATGGTGAATAATTCAGTTTTTAGTTAGTAAGTTACTGTTTCGCTTAGTGTTTGTCATGGTAGATCAGTAGTGAAGTTGCAACATCTGTCAAGATTGGTTATTTTAAGGGGAATTCAATATGAACAATGGCTAGTTGATCGATACTCTCCTGGTATATTCAAAGTTCGTGCAGTCATGGTTAGACTATGAGGGGTTCAACAAATGGAGTATGTTTGTGCATCGAACAGTGGAAGAAGAATCTGAGTGATGAGTGAGATGCTCCTATTACATTACAGTAATAGATAGCTTGTAGTTCTTTGTAGAGGTTGCGTAACTTGTTGCTCAACTATCTTTGCTGCCCTGGAGATGAATTTGTTATAACCATCAATTGTCATTCTTGATTCCAGTGTCGTGGGATTGTTTATTGCCTCTTCATGTTCTTTTGATGTTCTGTAAATCGGAGATATTGTATATATCTTAGACCCTACCAGATTAGCATCCCTTTAGACTTCTGGTTTATTCAGTTACTAGATCTTAGCCTTTTCATCCAATTCTGCATCCTAACCATCTCTATTTCTTAGTAGATTCAAATTCTTGACTAGGAAATAGGACATTTGGTATATCTAAGTCCTTGCTATTCCTTGAATGCCTGAATGGGCTGGTCATCATCATAACTTTGTATGTATTCTCTTCTCAACTCTGAATAGGATATATGTCCTACTTCTTCCTCTTGAAGTTGTTTCCCCTTGACCAATTTTCTGTTTTTTGGGAATGAAAATTGGGTAGGGAAATTATTAGTCAGTTGTATCCTTTTCTGTTCCTGGTATTCGTATCTTCCCTTTTAGCTTTCCTTTTGCCAGTCCAATTATGCTAGTTAAGAGGTTTATTCCTTCACCAAAAAGAAAATCATCTTGCCTAAGGAGATTGGTGATCACTAGCTACTGATAAG.........................................................................................................................CGCTTTTAGTTGGAGCTGTTGGAAGAAGATTGTTGAGCGGTTGTTCTCCCTACTCTCTACTCTCGCCATGGTAGCACTACTCGTTATATGTCATTTCAGTGTCTCTATAAGATGTTGTCTGTAGGTCATTCGACCAAACTGGTAGTTACTACTGCAGTAATTATCTAGTTATGTCATGTTTTAGGTTTTGGAGTTTTACTTTTGTTGTTGAACTTGTTGATTTTAAGGTGGCATTTTGATTACGACTTCAAAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAACTCGAGGGGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U346262" ref_strand="+" ref_description="SGN-U346262        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>tcatccaaattatatatttggtgtgaccaaaaaacataaacaagtactcttgtagatttatctgtcctcttaaaaactgctttttttgttttgttttcagaaagaaattatatggcaaatatttctacttgctcccttctcgttgctgctgtttttctagttggaatattgatgatcccatcggaaatattgggagaaacatgctatcaaatacacccagagatattgtgtgatgaaggcaaagttgaaggggaatgtttacctttctgcaatgacaaatttggatcctctgctggtggacaatgcattgagcaaattggctttgatggtcctttttgtgcatgtgatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0021K07.1" temp_strand="-" temp_description="C06HBa0021K07.1  AC209507.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0021K07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="85591" stop="83921"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85291" g_stop="85132" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85131" i_stop="84411" i_length="721">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84410" g_stop="84221" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="350" r_length="190" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0021K07.1" gen_strand="-" ref_id="SGN-U346262" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>350</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0021K07.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U346262" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85291" e_stop="85132"/>
          <exon e_start="84410" e_stop="84221"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATCCAAATTATATATTTGGTGTGACCAAAAAACATAAACAAGTACTCTTGTAGATTTATCTGTCCTCTTAAAAACTGCTTTTTTTGTTTTGTTTTCAGAAAGAAATTATATGGCAAATATTTCTACTTGCTCCCTTCTCGTTGCTGCTGTTTTTCTAGGTAATATTTAACTACACACACGACATGTTTTTTCATTATATTGTATTTATTGATTTAATTTGTACTTGGTAGCATATATAATTTCTCCTATGTCTGTTTTTATAATCCATCTTTAATTGGACTAGACGATTAAGTTATAAGAAAGGAGAAGGATCTTGTTCGATTGATCCTTTTTATTCATGTTTAGTCCTTTTGTGTGCATCTTCAGAACCAATTTTTTGGAAATTAAAGCTAGATCAAAATCTAAGACTCGAATATAGCTTTCTATTGTTGTCTTGAATATTCCATATTTAATCTTATGTCCGTTCTTTTCTCTTTTTTTTTAATTTTGTCTACGTGGTATTCAGGGCCCACATTGGAGCTCTAACTAAATTTGTATGGCTAGGCCCTACTCGGATATGATACATCTTCAGGCCTCAAATCCGAAAGCTTTGATATATAAGAGTAAAACAGTCTCACCGTATCAAAACTCATGTTGTTGTTACATATCTATCAACATTAATATAGAAAAAGGAATTGATCGTGATTTTAAACTTGTTCTTTACATGTTGAGCTAATTGTTTAATTAATGGAGGTAGACGAGAAGTGATTAGGAAAATGATGGTTAAAAAAAACATGTGTACCATTGTATGTGGGTTAGAGAGAAAAATCAAATCAATTCATTAGAAGTGGATGATCTATGATTTTAAATGAAGTGTTTAATCTGTACGCATGCATGCAGTTGGAATATTGATGATCCCATCGGAAATATTGGGAGAAACATGCTATCAAATACACCCAGAGATATTGTGTGATGAAGGCAAAGTTGAAGGGGAATGTTTACCTTTCTGCAATGACAAATTTGGATCCTCTGCTGGTGGACAATGCATTGAGCAAATTGGCTTTGATGGTCCTTTTTGTGCATGTGATTA</genome_strand>
        <mrna_strand>TCATCCAAATTATATATTTGGTGTGACCAAAAAACATAAACAAGTACTCTTGTAGATTTATCTGTCCTCTTAAAAACTGCTTTTTTTGTTTTGTTTTCAGAAAGAAATTATATGGCAAATATTTCTACTTGCTCCCTTCTCGTTGCTGCTGTTTTTCTAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAATATTGATGATCCCATCGGAAATATTGGGAGAAACATGCTATCAAATACACCCAGAGATATTGTGTGATGAAGGCAAAGTTGAAGGGGAATGTTTACCTTTCTGCAATGACAAATTTGGATCCTCTGCTGGTGGACAATGCATTGAGCAAATTGGCTTTGATGGTCCTTTTTGTGCATGTGATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U316951" ref_strand="+" ref_description="SGN-U316951        Tomato 200607 #1 [18 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr5:9117910-9119809 REVERSE | Aliases: T1N24.12, T1N24_12(evalue: 1e-99, score=359) genbank/nr: gi|18420990|ref|NP_568482.1| endopeptidase - like protein [Arabidopsis thaliana] gi|13877555|gb|AAK43855.1| Unknown protein [Arabidopsis thaliana] gi|23197896|gb|AAN15475.1| Unknown protein [Arabidopsis thaliana](evalue: 1e-97, score=359)">
      <seq>aatcttctatatcctaactgcggtcgtccttcttcttcactcatactgtccgaagctgtgcggtttgcggtggcggcgctgctcatcttcaacggcaaaaagatggaaatcaaggcagatggaagtgatggatcattggttttaatcaagcaaggagctgaggctagggtatttgagtcaacatttgtgggtagtagaaggtgtattatcaaggaacggttttcaaagaaatacaggcatccgattttggactcaaagctcactcttaaacggttgaatgcggaagcaaggtgcatgacaaaagctagacggcttggtgttgtcactccagtgttgtatgctgttgacactgttatgcacactctcacctttgaatatgttgaaggtccttcggtgaaagatatattgcttggctttggactagttggagttgacgaagaacgaatggctgatattacaacacagattggtaatgctattggaaaactacacgatggtggcctagtccatggcgatttgacaacatcaaacatgttactgaggagttctgccaatcagctggtgctgattgactttggtctaagctttacttcaacgcttccagaagataaagcagttgatttatatgtactggaacgtgctttactctctatgcactcttcttgtggaaatgtgatggaccgtatacttgctgcatataggaagtcctcaaagcaatggtcatcaaccttgaacaagctagcggaagtgaggcaaagaggaagaaagcgcacaatggttggttgagtttctgcagttctgcactccacgtggagtgatgacatggggcaggagaaagcttaagactgcaaagaccaatctgtattcttgattattgtagtgtgggtgatgctactcatgttaattgtttgaatttgccttgtatctactattatctgcattcttattcaacccgtagaagaaactgctgccttggtaattggattatttgtagacgaatctctgttaaggttgatccaaacgacaacgtttacacattttacaactcatcatgcatgttcttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0021K07.1" temp_strand="-" temp_description="C06HBa0021K07.1  AC209507.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0021K07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="92613" stop="88706"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92313" g_stop="92212" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="102" r_length="102" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92211" i_stop="91386" i_length="826">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91385" g_stop="91323" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="165" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91322" i_stop="91101" i_length="222">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.031" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91100" g_stop="90984" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="282" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="90983" i_stop="90901" i_length="83">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90900" g_stop="90622" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="561" r_length="279" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="90621" i_stop="90465" i_length="157">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="90464" g_stop="90351" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="562" r_stop="675" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="90350" i_stop="90060" i_length="291">
            <donor d_prob="0.633" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="90059" g_stop="89987" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="676" r_stop="748" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="89986" i_stop="89855" i_length="132">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="89854" g_stop="89788" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="749" r_stop="815" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="89787" i_stop="89258" i_length="530">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="89257" g_stop="88999" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="816" r_stop="1074" r_length="259" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0021K07.1" gen_strand="-" ref_id="SGN-U316951" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>1074</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0021K07.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U316951" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92313" e_stop="92212"/>
          <exon e_start="91385" e_stop="91323"/>
          <exon e_start="91100" e_stop="90984"/>
          <exon e_start="90900" e_stop="90622"/>
          <exon e_start="90464" e_stop="90351"/>
          <exon e_start="90059" e_stop="89987"/>
          <exon e_start="89854" e_stop="89788"/>
          <exon e_start="89257" e_stop="88999"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCTTCTAAATCCTAACTGCGGTCGTCCTTCTTCTTCACTCATACTGTCCGAAGCTGTGCGGTTTGCGGTGGCGGCGCTGCTCATCTTCAACGGCAAAAAGGTGTCTTTCACTATTCTTAAAACTCACAAATTGCTCTTCAGTTTTCATAATCGTTTATGGTTGTTTTTTGCTCTTCTTTTTTCCCCCACGTTTTTATCTCCAAATTCTGCTGCTACTGCTTTGGTGATGCTACAAATTGGGTTTTATACTTGTAAAAATTGAAGCTTTCCTTTAGCTACAATAAACAACTCTTCAACAAAAAATATTCTCCCTCTATTTTAAGCTGTAATTTTAGCTTAGTATCTTTTCTTGATAAAAAAAATTATGTAGAAGAGGTATAGTAAATAAACAATGAAGAACAAAGAAAATATGTGATTCCTAAATATGATTACAAATAAGGAGAAACAGAGGGGAGGCTTGATAGCATTCGATTCGACTAGCTACTAACCTTCTGCCTTAACCCTCCACTAAGAAAATAGAAAATCACAGAAAAACCTTTGTATAAATCAAAGAATTTATTTTCTTCAATAATTATGGTGTCCAAAGCACAGACCTCCATTGATTCATGGGGTATCTGCTACCCCACTAGCATAGGTATTGGGTAACTCTATCCATCAAGGCTTGGATAGATGCACAGGATTCAATTAGTGTTTTTCCCTTTGATTGGATTTGAACCTAAGACCTTATGGTTTTCAACGTAAGCGAACCCCCATGGATGCCAAAGAATTTCCTAAGTGTTCATCTGCATGCACTCTTCATGTTGTACTTGAATTGTTGGAAGAGCTGAAGAACTTTGTTTCGTGGAAGCCTAAAGTTTTGTTATCCCTTTTTTTTAATTTACTTATTTATTATTTTGCCCCTGAAGTTAATTGGAAATTTTACTTAGATGGAAATCAAGGCAGATGGAAGTGATGGATCATTGGTTTTAATCAAGCAAGGAGCTGAGGCTGTGAGTTTATATTTAGTTCATATAAAACTTTCCTGTAATATTTCTGATCTTTTTCTCTCACTTTTTTGGGAAAGATTTTGTGTGCACATGTGTCTTTTGTATAGTTTATGAGTTAATAATAATTTATACTACTGTTTCTGCCAATGTTCATTTGATGGCAAGTAGTTGTTGACTCTAGAATTTCTGAAACACTTTATCTTGTTTCTCTGTTGAGGATATCAGAGGGTATTTGAGTCAACATTTGTGGGTAGTAGAAGGTGTATTATCAAGGAACGGTTTTCAAAGAAATACAGGCATCCGATTTTGGACTCAAAGCTCACTCTTAAACGGTTGAATGCGGTCGGTGTAAATGATACCTACTCTTTCCTTTAATCTTTCTTAAAACTTGTGTTTCTTAAAGAAATATTGGAATCCTGTCACAGGAAGCAAGGTGCATGACAAAAGCTAGACGGCTTGGTGTTGTCACTCCAGTGTTGTATGCTGTTGACACTGTTATGCACACTCTCACCTTTGAATATGTTGAAGGTCCTTCGGTGAAAGATATATTGCTTGGCTTTGGACTAGTTGGAGTTGACGAAGAACGAATGGCTGATATTACAACACAGATTGGTAATGCTATTGGAAAACTACACGATGGTGGCCTAGTCCATGGCGATTTGACAACATCAAACATGTTACTGAGGAGTTCTGCCAATCAGCTGGTGAACTTTTTCTCTCTTTTCGAAGCTCCTGTAGCTCTCATGATTGATTTGTCTTCAATTTCATTCTTTATTTGCCTTTTTCTCGTGGTTTTGGAGGATGAAGTTCTAAGGTCACCTCAATGCGTTTATTTGTCTCTCTCTGGTACTTTTTCTCCAGGTGCTGATTGACTTTGGTCTAAGCTTTACTTCAACGCTTCCAGAAGATAAAGCAGTTGATTTATATGTACTGGAACGTGCTTTACTCTCTATGCACTCTTCTTGTGGAAATGTGGTAAGCTCCGTCATATCTACTGTTTTGTGTGTTAGAGGCTTGTATAAAGCCGTTTGAAGCTTTTTGTTCTTCTGTATTCTCTCATTTTTAAATTATAATCTCTTTCAGGCAAAGGATGTTAATTTCTTCTTTAAAATTAATATTCCTTTTGCCTTTTGTGTCATATTATTGCGGAAAACATCCCCCTCTTCTCAGAAGCAGTATTTTTTATGACACTATCGAACAGTTCTCTACTTCTCTCGGTGCTCTTTTTCTCATATTCATCATGTATGGTTTATATGGTTATCGCAGATGGACCGTATACTTGCTGCATATAGGAAGTCCTCAAAGCAATGGTCATCAACCTTGAACAAGCTAGCGGAAGGTGCTGCCGACTCTTCATACATGTCCCTTTCTGTTTATTACCTTGTTATTCCTAGAAAGAAGAAGTAGCATGGTTTTAATTCCGATGGTTTCTTTATGTTTTTCCTTTCTTTTTTTTTTGTAACTTATTTAGTGAGGCAAAGAGGAAGAAAGCGCACAATGGTTGGTTGAGTTTCTGCAGTTCTGCACTCCACGTGGAGGTTAGACTTGTTTCTTTGCTTTCAACTGCATCCAGTATGATTTTTTTTTTATTTCCAGAATGTAATAGTATCAACTTCCCATGTTTTCATGCCAAAAGCAGAGTGTCTTGCTTGTGCCCCCTCTTTCTTGAAATCGCTGCTATCCTATATATAATTAATTTCTATGAAGTAATCATTCACCATTTTCCCTATGTTCTCTTGGAGATGAGGTGTCGGATGTCATGGTAATGTGGCCTATTTGTTTTCTTAGTACAGCTTGATGCATTCACATACTCCTTGCCTTTCTGTTTCCTGTTCTCGTATTTCTGGAAGTGTGAACATCGGTAGTGTTGCAGACGATGATGTAACATGAATATCTTCAGATTATTGAAGAAATCGACTCATATATCTACCAAAAGTTATAGAAGAATGTGCTTATGTTTCACTCAGAGCTGCAAATAGAGTCTTTATAAGTTGTACATGACATTCCGAGCCTACATTTGCGAGCTGCCTCTAATAGTTTGTAAATGATTTTTCTGATTGATTTTCAGTGATGACATGGGGCAGGAGAAAGCTTAAGACTGCAAAGACCAATCTGTATTCTTGATTATTGTAGTGTGGGTGATGCTACTCATGTTAATTGTTTGAATTTGCCTTGTATCTACTATTATCTGCATTCTTATTCAACCCGTAGAAGAAACTGCTGCCTTGGTAATTGGATTATTTGTAGACGAATCTCTGTTAAGGTTGATCCAAACGACAACGTTTACACATTTTACAACTCATCATGCATGTTCTTCAAATCCCAAT</genome_strand>
        <mrna_strand>AATCTTCTATATCCTAACTGCGGTCGTCCTTCTTCTTCACTCATACTGTCCGAAGCTGTGCGGTTTGCGGTGGCGGCGCTGCTCATCTTCAACGGCAAAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAATCAAGGCAGATGGAAGTGATGGATCATTGGTTTTAATCAAGCAAGGAGCTGAGGCT..............................................................................................................................................................................................................................AGGGTATTTGAGTCAACATTTGTGGGTAGTAGAAGGTGTATTATCAAGGAACGGTTTTCAAAGAAATACAGGCATCCGATTTTGGACTCAAAGCTCACTCTTAAACGGTTGAATGCG...................................................................................GAAGCAAGGTGCATGACAAAAGCTAGACGGCTTGGTGTTGTCACTCCAGTGTTGTATGCTGTTGACACTGTTATGCACACTCTCACCTTTGAATATGTTGAAGGTCCTTCGGTGAAAGATATATTGCTTGGCTTTGGACTAGTTGGAGTTGACGAAGAACGAATGGCTGATATTACAACACAGATTGGTAATGCTATTGGAAAACTACACGATGGTGGCCTAGTCCATGGCGATTTGACAACATCAAACATGTTACTGAGGAGTTCTGCCAATCAGCTG.............................................................................................................................................................GTGCTGATTGACTTTGGTCTAAGCTTTACTTCAACGCTTCCAGAAGATAAAGCAGTTGATTTATATGTACTGGAACGTGCTTTACTCTCTATGCACTCTTCTTGTGGAAATGTG...................................................................................................................................................................................................................................................................................................ATGGACCGTATACTTGCTGCATATAGGAAGTCCTCAAAGCAATGGTCATCAACCTTGAACAAGCTAGCGGAAG....................................................................................................................................TGAGGCAAAGAGGAAGAAAGCGCACAATGGTTGGTTGAGTTTCTGCAGTTCTGCACTCCACGTGGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGACATGGGGCAGGAGAAAGCTTAAGACTGCAAAGACCAATCTGTATTCTTGATTATTGTAGTGTGGGTGATGCTACTCATGTTAATTGTTTGAATTTGCCTTGTATCTACTATTATCTGCATTCTTATTCAACCCGTAGAAGAAACTGCTGCCTTGGTAATTGGATTATTTGTAGACGAATCTCTGTTAAGGTTGATCCAAACGACAACGTTTACACATTTTACAACTCATCATGCATGTTCTTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335900" ref_strand="+" ref_description="SGN-U335900        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr5:9117910-9119809 REVERSE | Aliases: T1N24.12, T1N24_12(evalue: 2e-19, score=93.2) genbank/nr: gi|78708658|gb|ABB47633.1| expressed protein [Oryza sativa (japonica cultivar-group)] (evalue: 3e-18, score=95.5)">
      <seq>aattcccaaatcttctaaatcctaactgcgacattgtcgtccttcttcttcactcatactgtccgaagctgtgcggttcgcggtggcggcgctgctcatcttcaacggcaaaaagatggaaatcaaggcagatggaagtgatggatcgttggttttaatcaagcaaggagctgaggctgtgagtttatatttagttcatataaaactttcctgtaatatttctgatctttttccctcacttttttgggaaagaaattgtgttcgcatgtgtcttttgtttagtttatgagttaataataatttatactactgtttctgccaatgttaatttgatggcaagtagttgttgactctagaatttctgtaacactttatcttgtttctctgttgaggatatcagagggtatttgagtcaacatttgtgggtagtagaaggtgtattatcaaggaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0021K07.1" temp_strand="-" temp_description="C06HBa0021K07.1  AC209507.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0021K07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="92621" stop="90749"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92321" g_stop="92212" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="0.900"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92211" i_stop="91386" i_length="826">
            <donor d_prob="0.974" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91385" g_stop="91049" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="452" r_length="337" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0021K07.1" gen_strand="-" ref_id="SGN-U335900" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0021K07.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335900" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92321" e_stop="92212"/>
          <exon e_start="91385" e_stop="91049"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTCCCAAATCTTCTAAATCCTAACTGCG-----GTCGTCCTTCTTCTTCACTCATACTGTCCGAAGCTGTGCGGTTTGCGGTGGCGGCGCTGCTCATCTTCAACGGCAAAAAGGTGTCTTTCACTATTCTTAAAACTCACAAATTGCTCTTCAGTTTTCATAATCGTTTATGGTTGTTTTTTGCTCTTCTTTTTTCCCCCACGTTTTTATCTCCAAATTCTGCTGCTACTGCTTTGGTGATGCTACAAATTGGGTTTTATACTTGTAAAAATTGAAGCTTTCCTTTAGCTACAATAAACAACTCTTCAACAAAAAATATTCTCCCTCTATTTTAAGCTGTAATTTTAGCTTAGTATCTTTTCTTGATAAAAAAAATTATGTAGAAGAGGTATAGTAAATAAACAATGAAGAACAAAGAAAATATGTGATTCCTAAATATGATTACAAATAAGGAGAAACAGAGGGGAGGCTTGATAGCATTCGATTCGACTAGCTACTAACCTTCTGCCTTAACCCTCCACTAAGAAAATAGAAAATCACAGAAAAACCTTTGTATAAATCAAAGAATTTATTTTCTTCAATAATTATGGTGTCCAAAGCACAGACCTCCATTGATTCATGGGGTATCTGCTACCCCACTAGCATAGGTATTGGGTAACTCTATCCATCAAGGCTTGGATAGATGCACAGGATTCAATTAGTGTTTTTCCCTTTGATTGGATTTGAACCTAAGACCTTATGGTTTTCAACGTAAGCGAACCCCCATGGATGCCAAAGAATTTCCTAAGTGTTCATCTGCATGCACTCTTCATGTTGTACTTGAATTGTTGGAAGAGCTGAAGAACTTTGTTTCGTGGAAGCCTAAAGTTTTGTTATCCCTTTTTTTTAATTTACTTATTTATTATTTTGCCCCTGAAGTTAATTGGAAATTTTACTTAGATGGAAATCAAGGCAGATGGAAGTGATGGATCATTGGTTTTAATCAAGCAAGGAGCTGAGGCTGTGAGTTTATATTTAGTTCATATAAAACTTTCCTGTAATATTTCTGATCTTTTTCTCTCACTTTTTTGGGAAAGATTTTGTGTGCACATGTGTCTTTTGTATAGTTTATGAGTTAATAATAATTTATACTACTGTTTCTGCCAATGTTCATTTGATGGCAAGTAGTTGTTGACTCTAGAATTTCTGAAACACTTTATCTTGTTTCTCTGTTGAGGATATCAGAGGGTATTTGAGTCAACATTTGTGGGTAGTAGAAGGTGTATTATCAAGGAAC</genome_strand>
        <mrna_strand>AATTCCCAAATCTTCTAAATCCTAACTGCGACATTGTCGTCCTTCTTCTTCACTCATACTGTCCGAAGCTGTGCGGTTCGCGGTGGCGGCGCTGCTCATCTTCAACGGCAAAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAATCAAGGCAGATGGAAGTGATGGATCGTTGGTTTTAATCAAGCAAGGAGCTGAGGCTGTGAGTTTATATTTAGTTCATATAAAACTTTCCTGTAATATTTCTGATCTTTTTCCCTCACTTTTTTGGGAAAGAAATTGTGTTCGCATGTGTCTTTTGTTTAGTTTATGAGTTAATAATAATTTATACTACTGTTTCTGCCAATGTTAATTTGATGGCAAGTAGTTGTTGACTCTAGAATTTCTGTAACACTTTATCTTGTTTCTCTGTTGAGGATATCAGAGGGTATTTGAGTCAACATTTGTGGGTAGTAGAAGGTGTATTATCAAGGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U332676" ref_strand="+" ref_description="SGN-U332676        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr3:23386592-23388448 REVERSE | Aliases: F16M2.120(evalue: 4e-91, score=329) genbank/nr: gi|18412695|ref|NP_567144.1| expressed protein [Arabidopsis thaliana] gi|13878075|gb|AAK44115.1| unknown protein [Arabidopsis thaliana] gi|17104745|gb|AAL34261.1| unknown protein [Arabidopsis thaliana](evalue: 2e-89, score=329)">
      <seq>ttttcggtgtaaccattagagtttgctaacacaattggtggatggctcctctaaagaaatccaagaaagattctaacaagttgaagaaaatcaaagccaaaaacaagaaaaacaacattgttcctgctgagaacaaaggaactgaatgcgattggtgggatagtttctggcacaagaataaaacatcaaccccaggttctggtgtacctagtgatgaagaggaaggtttcaagtattttttccgtgtttccaacaagacttttgattacatatgttcacttgtaagggaggaccttatctcaagacctccttcaggtctgataaacattgagggaagacttcttagtgttgagaagcaagttgcgattgcattgagaagattggcttctggtgaatcccaagtttcagttggggcatcatttggggttgggcagtccactgtgtctcaggttacctggagattcattgaggcactggaagaacgtgcaaagcaccatcttaagtggccagaacctagtaagatggatataatcaagtctgagtttgaacaatcatttggtttgcctaactgttgtggagcaattgatgcaactcacatcataatgactcttcctgctattcaaacctcagatgattggtgtgatcaagaaagcaattacagcatgcttttgcaaggtattgtggacagcgagatgcgttttttagacataatgacaggatggcctggggggcatgaccacttcaaggctgttcaagtgctctggattttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0021K07.1" temp_strand="+" temp_description="C06HBa0021K07.1  AC209507.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0021K07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="92978" stop="95117"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93278" g_stop="93472" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="195" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93473" i_stop="94244" i_length="772">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94245" g_stop="94818" g_length="574"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="770" r_length="575" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0021K07.1" gen_strand="+" ref_id="SGN-U332676" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>769</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0021K07.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U332676" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93278" e_stop="93472"/>
          <exon e_start="94245" e_stop="94818"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCGGTGTAACCATTAGAGTTTGCTAACACAATTGGTGGATGGCTCCTCTAAAGAAATCCAAGAAAGATTCTAACAAGTTGAAGAAAATCAAAGCCAAAAACAAGAAAAACAACATTGTTCCTGCTGAGAACAAAGGAACTGAATGCGATTGGTGGGATAGTTTCTGGCACAAGAATAAAACATCAACCCCAGGTCCCTCTCTGCTCAAATTTACATTCTTTAACAACATTTTCTCAAATTCTATTGTTTTTTCGATTCCATTTCACTTATTAATTCGATTGGGGTGTTGGTAAGTGTCAAGATTGGAGCTTTGAAGTCTGATTTCTGCAAATATAGTTCGTTATTTTAACCCTTATTTGTTAAATTCGCAAAGCATTCAAGGGGATTCACGTATATAGAATATGTGCATAAAAGAATTGTTTTTGACAGCCCTTGTAGACAAGATGGCTCCACTCCCTGTAGGTTGAAGGGTTGTGTGAAAAATAATCTAATTATTCATGTTGTTGACTCTAACTAGCTAAATTGATTGACTTACTGCATTTACTTGAAGTCAGGTCTCTAAAATAGGAAGAGAAGAGGTTACTTAAGACTCCTGTTATAAATGATCTCTCTTAATAGTCTAATTTATTCTAGTGAAATCCAAGGCGTTGTAGATATTGTCAAAGGCGGAACGTCTTGTTATTGTTCTAGTTAGCATAATAATTAAAAAAAATCATTCTTAGGTTTGTAATGTGGTTGTTGTCCACTTGTCCTTAGAAAGATGAAGGTTTTCCCACATAAGCAAGTTTGAGAGATGCCAATAGAATGGAGTTGTCTGCTAGGATATTTTATGTAACAACAGTCTCGGAACCCGTCTTATTTCTTTTTAATCTTTGCAACTTTTTCCTGTAAGGTCATTTTGGATCTTTATTTTTTTTCTTTTTGTTGCAGGAATTAACTCACTCTTATACTTTTTATCTTGCAGGTTCTGGTGTACCTAGTGATGAAGAGGAAGGTTTCAAGTATTTTTTCCGTGTTTCCAACAAGACTTTTGATTACATATGTTCACTTGTAAGGGAGGACCTTATCTCAAGACCTCCTTCAGGTCTGATAAACATTGAGGGAAGACTTCTTAGTGTTGAGAAGCAAGTTGCGATTGCATTGAGAAGATTGGCTTCTGGTGAATCCCAAGTTTCAGTTGGGGCATCATTTGGGGTTGGGCAGTCCACTGTGTCTCAGGTTACCTGGAGATTCATTGAGGCACTGGAAGAACGTGCAAAGCACCATCTTAAGTGGCCAGAACCTAGTAAGATGGATATAATCAAGTCTGAGTTTGAACAATCATTTGGTTTGCCTAACTGTTGTGGAGCAATTGATGCAACTCACATCATAATGACTCTTCCTGCTATTCAAACCTCAGATGATTGGTGTGATCAGGAAAGCAATTACAGCATGCTTTTGCAAGGTATTGTGGACAGCGAGATGCGTTTTTTAGACATAGTGACAGGATGGCCT-GGGGGCATGACCACTTCAAGGCTGTTCAAGTGCTCTGGATTTTA</genome_strand>
        <mrna_strand>TTTTCGGTGTAACCATTAGAGTTTGCTAACACAATTGGTGGATGGCTCCTCTAAAGAAATCCAAGAAAGATTCTAACAAGTTGAAGAAAATCAAAGCCAAAAACAAGAAAAACAACATTGTTCCTGCTGAGAACAAAGGAACTGAATGCGATTGGTGGGATAGTTTCTGGCACAAGAATAAAACATCAACCCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGGTGTACCTAGTGATGAAGAGGAAGGTTTCAAGTATTTTTTCCGTGTTTCCAACAAGACTTTTGATTACATATGTTCACTTGTAAGGGAGGACCTTATCTCAAGACCTCCTTCAGGTCTGATAAACATTGAGGGAAGACTTCTTAGTGTTGAGAAGCAAGTTGCGATTGCATTGAGAAGATTGGCTTCTGGTGAATCCCAAGTTTCAGTTGGGGCATCATTTGGGGTTGGGCAGTCCACTGTGTCTCAGGTTACCTGGAGATTCATTGAGGCACTGGAAGAACGTGCAAAGCACCATCTTAAGTGGCCAGAACCTAGTAAGATGGATATAATCAAGTCTGAGTTTGAACAATCATTTGGTTTGCCTAACTGTTGTGGAGCAATTGATGCAACTCACATCATAATGACTCTTCCTGCTATTCAAACCTCAGATGATTGGTGTGATCAAGAAAGCAATTACAGCATGCTTTTGCAAGGTATTGTGGACAGCGAGATGCGTTTTTTAGACATAATGACAGGATGGCCTGGGGGGCATGACCACTTCAAGGCTGTTCAAGTGCTCTGGATTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U345925" ref_strand="+" ref_description="SGN-U345925        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | sulfate transporter (ST1), identical to sulfate transporter (Arabidopsis thaliana) GI:2285885 | chr3:19262274-19266738 REVERSE | Aliases: None(evalue: 3e-122, score=435) genbank/nr: gi|2285885|dbj|BAA21657.1| sulfate transporter [Arabidopsis thaliana] >gi|11279065|pir||T48901 sulfate transporter ATST1 [imported] - Arabidopsis thaliana (evalue: 2e-120, score=436)">
      <seq>gcgccattgacgtctgtcatattgggaacgattctcgtttatataacgcatgctgaaaaacacggtgttgctgtgattggagagctgaagaaagggataaatccaccatcaataatggatctgtcgtttggatcgaaatatatgacaacggctatcaaaactggcatagtcacgggtgtcattgcccttgctgaaggaatagcagtaggtcgaagttttgcaatgttcaagaattaccatatagatggtaacaaagagatgattgcttttgggatgatgaacattgttggctcatgcacttcttgttacctcactactgggccattctcgcgatcagcagtgaacttcaatgctggatgcaaaacagcagtatcaaacattgtcatggcgttggctgtgatggtgacgttgctattgctaacgccattgttccacttcactcctctcgtcgtgttgtcatccattattattgctgccatgctcggactcatcgactataatgctgccattcatctctggcatgtcgacaaattcgacttcctcgtttgcatgagtgcatacattggtgttgtctttggcaacattgaaattggcttagtcatggctgttggcttatcgttgctaagggtattactttctgtagcaaggccaaggactttagtacttggtaatattcccaattctatgatctacagaaatgtggagcaatatccaaatacaaacaacgttccaggcgttctcatacttgacattggagctcctattttcttcactaactcaagctatttaagagagaggatctcaaggtggattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0021K07.1" temp_strand="-" temp_description="C06HBa0021K07.1  AC209507.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0021K07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="99554" stop="97292"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99254" g_stop="99180" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99179" i_stop="98870" i_length="310">
            <donor d_prob="0.889" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98869" g_stop="98753" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="192" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98752" i_stop="98627" i_length="126">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98626" g_stop="98500" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="319" r_length="127" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98499" i_stop="98279" i_length="221">
            <donor d_prob="0.913" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98278" g_stop="97992" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="606" r_length="287" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="97991" i_stop="97910" i_length="82">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="97909" g_stop="97719" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="607" r_stop="797" r_length="191" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="97718" i_stop="97610" i_length="109">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="97609" g_stop="97592" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="798" r_stop="815" r_length="18" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0021K07.1" gen_strand="-" ref_id="SGN-U345925" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>815</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0021K07.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U345925" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99254" e_stop="99180"/>
          <exon e_start="98869" e_stop="98753"/>
          <exon e_start="98626" e_stop="98500"/>
          <exon e_start="98278" e_stop="97992"/>
          <exon e_start="97909" e_stop="97719"/>
          <exon e_start="97609" e_stop="97592"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGCCATTGACGTCTGTCATATTGGGAACGATTCTCGTTTATATAACGCATGCTGAAAAACACGGTGTTGCTGTGGTAACAATTTTTAATTCTATTAGTTAAGTTATGGTTACATTTTAGGAGCTACATTATCAAATACATAACATAAATAAAACATGAACATGAACAAGAGACTTGTCAATTAGTTATCCGTAGCTGTAGTTTTGGTCGCACTCAATGACAAAAAAACGACAACAAATTAAGTGAGTTCAAATTTGTGTCTGTCATGTCACTCACGGGTAGAGCATTGCGGCTTGTGTAGGGATTATTTTATTCCTTAATAATCCGAAAATGCTCAAAATAATATGTCACCCATTTTGTGGAATAATATAATGTAATATTACAGATTGGAGAGCTGAAGAAAGGGATAAATCCACCATCAATAATGGATCTGTCGTTTGGATCGAAATATATGACAACGGCTATCAAAACTGGCATAGTCACGGGTGTCATTGCCCTTGCTGTAAGCTGCTTTGTTTCCATCTGCGTTTTTCACTACAAACATACACATATTTTAAAAAGCTTATTTAAATGGTCTTTTTTAGGAAGGCAATGTTATTCGATAAGTAATAAAAATACTTGTGTACAGGAAGGAATAGCAGTAGGTCGAAGTTTTGCAATGTTCAAGAATTACCATATAGATGGTAACAAAGAGATGATTGCTTTTGGGATGATGAACATTGTTGGCTCATGCACTTCTTGTTACCTCACTACTGGTATACTCAAATATCCTTGGGCCGAAAGTTCATTTATTTTGATTTGGACTAGCTAGTATCAATGTCACTTGGGCCCATATACCATGTGATTGATTAATCCACAATTTGTCCACTAAAATAAGATATTGGAAAAGAGAACCACACTTACTTGTCAAAATGTTTGATAGCGTATACAAGTTAAACTCGTAGGCTGAAAAATAAATGAATGTGCGTGCGTGCAGGGCCATTCTCGCGATCAGCAGTGAACTTCAATGCTGGATGCAAAACAGCAGTATCAAACATTGTCATGGCGTTGGCTGTGATGGTGACGTTGCTATTGCTAACGCCATTGTTCCACTTCACTCCTCTCGTCGTGTTGTCATCCATTATTATTGCTGCCATGCTCGGACTCATCGACTATAATGCTGCCATTCATCTCTGGCATGTCGACAAATTCGACTTCCTCGTTTGCATGAGTGCATACATTGGTGTTGTCTTTGGCAACATTGAAATTGGCTTAGTCATGGCTGTAACTACTACTACTACTACTTCCTAATGTATATGTCACTTAAAAGAAGATAAAGTTAAAACTTTTTGTATTGTAAATGCAGGTTGGCTTATCGTTGCTAAGGGTATTACTTTCTGTAGCAAGGCCAAGGACTTTAGTACTTGGTAATATTCCCAATTCTATGATCTACAGAAATGTGGAGCAATATCCAAATACAAACAACGTTCCAGGCGTTCTCATACTTGACATTGGAGCTCCTATTTTCTTCACTAACTCAAGCTATTTAAGAGAGAGGTAATAATTTAACTAATGTATTATATATACTACCAAGTTGTAAGTATACAATACCAACAGTCTCTTTCTACAAATACTAACTATTCGCTAATTCAATTTCCTGTTATAGGATCTCAAGGTGGATTGA</genome_strand>
        <mrna_strand>GCGCCATTGACGTCTGTCATATTGGGAACGATTCTCGTTTATATAACGCATGCTGAAAAACACGGTGTTGCTGTG......................................................................................................................................................................................................................................................................................................................ATTGGAGAGCTGAAGAAAGGGATAAATCCACCATCAATAATGGATCTGTCGTTTGGATCGAAATATATGACAACGGCTATCAAAACTGGCATAGTCACGGGTGTCATTGCCCTTGCT..............................................................................................................................GAAGGAATAGCAGTAGGTCGAAGTTTTGCAATGTTCAAGAATTACCATATAGATGGTAACAAAGAGATGATTGCTTTTGGGATGATGAACATTGTTGGCTCATGCACTTCTTGTTACCTCACTACTG.............................................................................................................................................................................................................................GGCCATTCTCGCGATCAGCAGTGAACTTCAATGCTGGATGCAAAACAGCAGTATCAAACATTGTCATGGCGTTGGCTGTGATGGTGACGTTGCTATTGCTAACGCCATTGTTCCACTTCACTCCTCTCGTCGTGTTGTCATCCATTATTATTGCTGCCATGCTCGGACTCATCGACTATAATGCTGCCATTCATCTCTGGCATGTCGACAAATTCGACTTCCTCGTTTGCATGAGTGCATACATTGGTGTTGTCTTTGGCAACATTGAAATTGGCTTAGTCATGGCT..................................................................................GTTGGCTTATCGTTGCTAAGGGTATTACTTTCTGTAGCAAGGCCAAGGACTTTAGTACTTGGTAATATTCCCAATTCTATGATCTACAGAAATGTGGAGCAATATCCAAATACAAACAACGTTCCAGGCGTTCTCATACTTGACATTGGAGCTCCTATTTTCTTCACTAACTCAAGCTATTTAAGAGAGAG.............................................................................................................GATCTCAAGGTGGATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U327120" ref_strand="+" ref_description="SGN-U327120        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, low similarity to N-methyl-D-aspartate receptor-associated protein (Drosophila melanogaster) GI:567104; contains Pfam profile PF01027: Uncharacterized protein family UPF0005 | chr1:730148-731379 FORWARD | Aliases: F10O3.11, F10O3_11(evalue: 7e-98, score=354) genbank/nr: gi|61889383|emb|CAI53895.2| putative receptor associated protein [Capsicum chinense] (evalue: 2e-97, score=358)">
      <seq>gattgtaagatgtggcagcagacgtggaatacgccttaccggaaagatgacgtggaaggcggagcaaggccgttgtatccggcgatgttggagaatccacaactccgttggggttttattcggaaagtttactcaattttgtctctacagttgcttataacaattgcagtgggcgctgttgttgttacggttcacccaattgcacatttttttgtgtcaactggggctggattagctctctatattcttcttatcatcgctcccttcatcacattgagcccgttgtattactatcaccagaaacatccggtgaatttcttgcttcttgggttgtttacagttactctggccttcgctgtaggattaacttgtgccttcaccagtgggaaagtaatattggagtccgtcatattaaccgcagcagttgtgcttagtttgaccatatacacattttgggcagcaaggagaggccacgattttaatttccttggaccattcttatttggtgcccttatggttctcatgttgtttgcctttattcagttactgtttcctctgggtaggctctctgtgatgatctatggctgtttagcgtccattttgttctgcgcatatataatttatgatacggatagtttaatcaagcgctacacttacgatgagtacatctgggctgctgtcggactgtatctggacgttatcaatctattcttatctatattgactatttttagagctgctgaatagtttccttgacaaataaataacaaaaatgttacatttgctctataaagaacattgtttatttattgtataaatcaataattttttttattacgaaactcgttgttagtatttgtaaggttgatggatatgtgagtgaccaaaagttgatagctgaaatattatattgtataaaggggttatatctgcaaaacatttgccctttggggcaaagttgaaatatatagtagccgcaaaaaagaagtttgagtgaatcagccctacttttcggcctaaatccaaatttggttgctgttttggcaacaattttacttgaagcaaaactcatattgggctttgtcacccatgccttggaaagtcagatcttgggcttcaactagcaggtgtacttgggaaaaatcccaaagtttgtgggtgtactatagttcgacttcatatatagacagattgagaatgaacgttttctttgaaaaaataaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0021K07.1" temp_strand="-" temp_description="C06HBa0021K07.1  AC209507.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0021K07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="112792" stop="110753"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="112493" g_stop="112223" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="271" r_length="271" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="112222" i_stop="112144" i_length="79">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="112143" g_stop="112030" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="385" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="112029" i_stop="111961" i_length="69">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="111960" g_stop="111803" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="543" r_length="158" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="111802" i_stop="111726" i_length="77">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="111725" g_stop="111054" g_length="672"/>
          <reference_exon_boundary r_type="cDNA" r_start="544" r_stop="1215" r_length="672" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1216" polyA_stop="1241"/>
      <MATCH_line gen_id="C06HBa0021K07.1" gen_strand="-" ref_id="SGN-U327120" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1215</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0021K07.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U327120" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="112493" e_stop="112223"/>
          <exon e_start="112143" e_stop="112030"/>
          <exon e_start="111960" e_stop="111803"/>
          <exon e_start="111725" e_stop="111054"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTGTAAGATGTGGCAGCAGACGTGGAATACGCCTTACCGGAAAGATGACGTGGAAGGCGGAGCAAGGCCGTTGTATCCGGCGATGTTGGAGAATCCACAACTCCGTTGGGGTTTTATTCGGAAAGTTTACTCAATTTTGTCTCTACAGTTGCTTATAACAATTGCAGTGGGCGCTGTTGTTGTTACGGTTCACCCAATTGCACATTTTTTTGTGTCAACTGGGGCTGGATTAGCTCTCTATATTCTTCTTATCATCGCTCCCTTCATCAGTATGTACTCTAAAAATTATATATTTGTTTCATCTTAATTTAGTTGTGCATAAACTGATATATTTGTAACATGTGGCAGCATTGAGCCCGTTGTATTACTATCACCAGAAACATCCGGTGAATTTCTTGCTTCTTGGGTTGTTTACAGTTACTCTGGCCTTCGCTGTAGGATTAACTTGTGCCTTCACCAGTGGTAAGTCTAATTTTTTTTATCTTCTGCTTAATTATTGCTTTATTAAATAGGTCTACTTTGATTTGTCAGGGAAAGTAATATTGGAGTCCGTCATATTAACCGCAGCAGTTGTGCTTAGTTTGACCATATACACATTTTGGGCAGCAAGGAGAGGCCACGATTTTAATTTCCTTGGACCATTCTTATTTGGTGCCCTTATGGTTCTCATGTTGTTTGCCTTTATTCAGGTTCAATATTATTACTCGATCCAAGTAATTTACATATATTACTCTCTGTTTGTTTATTTATTTATTTATTGTTGCAGTTACTGTTTCCTCTGGGTAGGCTCTCTGTGATGATCTATGGCTGTTTAGCGTCCATTTTGTTCTGCGCATATATAATTTATGATACGGATAGTTTAATCAAGCGCTACACTTACGATGAGTACATCTGGGCTGCTGTCGGACTGTATCTGGACGTTATCAATCTATTCTTATCTATATTGACTATTTTTAGAGCTGCTGAATAGTTTCCTTGACAAATAAATAACAAAAATGTTACATTTGCTCTATAAAGAACATTGTTTATCTATTGTATAAATCAATAATTTTTTTTATTACGAAACTCGTTGTTAGTATTTGTAAGGTTGATGGATATGTGAGTGACCAAAAGTTGATAGCTGAAATATTATATTGTATAAAGGGGTTATATCTGCAAAACATTTGCCCTTTGGGGCAAAGTTGAAATATATAGTAGCCGCAAAAAAGAAGTTTGAGTGAATCAGCCCTACTTTTCGGCCTAAATCCAAATTTGGTTGCTGTTTTGGCAACAATTTTACTTGAAGCAAAACTCATATTGGGCTTTGTCACTCATGTCTTGGAAAGTCAGATCTTGGGCTTCAACTAGCAGGTGTACTTGGGAAAAATCCCAAAGTTTGTGGGTGTACTATAGTTCGACTTCATATATAGACAGATTGAGAATGAACGTTTTCTTTGAA</genome_strand>
        <mrna_strand>GATTGTAAGATGTGGCAGCAGACGTGGAATACGCCTTACCGGAAAGATGACGTGGAAGGCGGAGCAAGGCCGTTGTATCCGGCGATGTTGGAGAATCCACAACTCCGTTGGGGTTTTATTCGGAAAGTTTACTCAATTTTGTCTCTACAGTTGCTTATAACAATTGCAGTGGGCGCTGTTGTTGTTACGGTTCACCCAATTGCACATTTTTTTGTGTCAACTGGGGCTGGATTAGCTCTCTATATTCTTCTTATCATCGCTCCCTTCATCA...............................................................................CATTGAGCCCGTTGTATTACTATCACCAGAAACATCCGGTGAATTTCTTGCTTCTTGGGTTGTTTACAGTTACTCTGGCCTTCGCTGTAGGATTAACTTGTGCCTTCACCAGTG.....................................................................GGAAAGTAATATTGGAGTCCGTCATATTAACCGCAGCAGTTGTGCTTAGTTTGACCATATACACATTTTGGGCAGCAAGGAGAGGCCACGATTTTAATTTCCTTGGACCATTCTTATTTGGTGCCCTTATGGTTCTCATGTTGTTTGCCTTTATTCAG.............................................................................TTACTGTTTCCTCTGGGTAGGCTCTCTGTGATGATCTATGGCTGTTTAGCGTCCATTTTGTTCTGCGCATATATAATTTATGATACGGATAGTTTAATCAAGCGCTACACTTACGATGAGTACATCTGGGCTGCTGTCGGACTGTATCTGGACGTTATCAATCTATTCTTATCTATATTGACTATTTTTAGAGCTGCTGAATAGTTTCCTTGACAAATAAATAACAAAAATGTTACATTTGCTCTATAAAGAACATTGTTTATTTATTGTATAAATCAATAATTTTTTTTATTACGAAACTCGTTGTTAGTATTTGTAAGGTTGATGGATATGTGAGTGACCAAAAGTTGATAGCTGAAATATTATATTGTATAAAGGGGTTATATCTGCAAAACATTTGCCCTTTGGGGCAAAGTTGAAATATATAGTAGCCGCAAAAAAGAAGTTTGAGTGAATCAGCCCTACTTTTCGGCCTAAATCCAAATTTGGTTGCTGTTTTGGCAACAATTTTACTTGAAGCAAAACTCATATTGGGCTTTGTCACCCATGCCTTGGAAAGTCAGATCTTGGGCTTCAACTAGCAGGTGTACTTGGGAAAAATCCCAAAGTTTGTGGGTGTACTATAGTTCGACTTCATATATAGACAGATTGAGAATGAACGTTTTCTTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U342447" ref_strand="+" ref_description="SGN-U342447        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>tcggaaactgaggttggggatgcgcaccagatttctgcttatgtcttgaaatgttcggaggccacatcatgttgtagtgtacggatagttgcatgaagtgtgatgatggtagcacttgggacaatatctgtgaaactgccttatctatctaggtttgtctgtaatgtaaatgaagatagaattagtgagaaatagtggtcaagtcatgaaaccttttttgcttttcgtataacagctagtcgccctcttcaatattgattttaggctgcagcatttccctgttgatggaaccattctcaatgatcttgcttacttggaattatacgtccaattttgttgctgggagctggagacaaaccagcggaactgcatgacatagaatgtgaatgggtcatgctctctgatgatccttgacgtttaaaataagctttcctgttccgttgtttgatcgaaataacgtgattgaaggcttaatttcttcttcaagtttgtcatttcagctatttattgactaggactgcattgcaggatactgcacatgcgaagaagtattgggaaagaattgncttctcctctacttatgtttctttccctttatataatacctacctttctnctgtaaaatcttaagttcaagatcatgatagcacatgtatgattatcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0021K07-fziac/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0021K07.1" temp_strand="+" temp_description="C06HBa0021K07.1  AC209507.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0021K07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="119197" stop="120461"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="119497" g_stop="120161" g_length="665"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="665" r_length="665" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0021K07.1" gen_strand="+" ref_id="SGN-U342447" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>665</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0021K07.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U342447" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="119497" e_stop="120161"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGGAAACTGAGGTTGGGGATGCGCACCAGATTTCTGCTTATGTCTTGAAATGTTCGGAGGCCACATCATGTTGTAGTGTACGGATAGTTGCATGAAGTGTGATGATGGTAGCACTTGGGACAATATCTGTGAAACTGCCTTATCTATCTAGGTTTGTCTGTAATGTAAATGAAGATAGAATTAGTGAGAAATAGTGGTCAAGTCATGAAACCTTTTTTGCTTTTCGTATAACAGCTAGTCGCCCTCTTCAATATTGATTTTAGGCTGCAGCATTTCCCTGTTGATGGAACCATTCTCAATGATCTTGCTTACTTGGAATTATACGTCCAATTTTGTTGCTGGGAGCTGGAGACAAACCAGCGGAACTGCATGACATAGAATGTGAATGGGTCATGCTCTCTGATGATCCTTGACGTTTAAAATAAGCTTTCCTGTTCCGTTGTTTGATCGAAATAACGTGATTGAAGGCTTAATTTCTTCTTCAAGTTTGTCATTTCAGCTATTTATTGACTAGGACTGCATTGCAGGATACTGCACATGCGAAGAAGTATTGGGAAAGAATTGTCTTCTCCTCTACTTATGTTTCTTTCCCTTTATATAATACCTACCTTTCTCCTGTAAAATCTGAAGTTCAAGATCATGATAGCACATGTATGATTATCTA</genome_strand>
        <mrna_strand>TCGGAAACTGAGGTTGGGGATGCGCACCAGATTTCTGCTTATGTCTTGAAATGTTCGGAGGCCACATCATGTTGTAGTGTACGGATAGTTGCATGAAGTGTGATGATGGTAGCACTTGGGACAATATCTGTGAAACTGCCTTATCTATCTAGGTTTGTCTGTAATGTAAATGAAGATAGAATTAGTGAGAAATAGTGGTCAAGTCATGAAACCTTTTTTGCTTTTCGTATAACAGCTAGTCGCCCTCTTCAATATTGATTTTAGGCTGCAGCATTTCCCTGTTGATGGAACCATTCTCAATGATCTTGCTTACTTGGAATTATACGTCCAATTTTGTTGCTGGGAGCTGGAGACAAACCAGCGGAACTGCATGACATAGAATGTGAATGGGTCATGCTCTCTGATGATCCTTGACGTTTAAAATAAGCTTTCCTGTTCCGTTGTTTGATCGAAATAACGTGATTGAAGGCTTAATTTCTTCTTCAAGTTTGTCATTTCAGCTATTTATTGACTAGGACTGCATTGCAGGATACTGCACATGCGAAGAAGTATTGGGAAAGAATTGNCTTCTCCTCTACTTATGTTTCTTTCCCTTTATATAATACCTACCTTTCTNCTGTAAAATCTTAAGTTCAAGATCATGATAGCACATGTATGATTATCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>17</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="6311" PGL_stop="1162"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="6311" e_stop="5872"/>
            <exon e_start="4763" e_stop="4514"/>
            <exon e_start="2636" e_stop="2545"/>
            <exon e_start="1602" e_stop="1162"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.887" acc_prob="0.996" e_score="0.993"/>
          <exon-intron don_prob="0.998" acc_prob="0.801" e_score="1.000"/>
          <exon-intron don_prob="0.779" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="6311" e_stop="5872" e_length="440"/>
          </exon>
          <intron i_serial="1" don_prob="0.887" acc_prob="0.996">
            <gDNA_intron_boundary i_start="5871" i_stop="4764" i_length="1108"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="4763" e_stop="4514" e_length="250"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.801">
            <gDNA_intron_boundary i_start="4513" i_stop="2637" i_length="1877"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="2636" e_stop="2545" e_length="92"/>
          </exon>
          <intron i_serial="3" don_prob="0.779" acc_prob="0.998">
            <gDNA_intron_boundary i_start="2544" i_stop="1603" i_length="942"/>
          </intron>
          <exon e_serial="4" e_score="0.993">
            <gDNA_exon_boundary e_start="1602" e_stop="1162" e_length="441"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6311" stop="5872"/>
              <exon start="4763" stop="4514"/>
              <exon start="2636" stop="2545"/>
              <exon start="1602" stop="1162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U320534" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATACGCTCAAACCATAGTAAATAAAAAATAAAAAATGGCTTCTCTTCGTTTTCCATTCTTGTTTCCTCAGCCCCACAAGACTCCGTCTTCCGCCACTTCAGATGCTCCATCTCGCTCCTTCTCCACCGTCGCTGTCGCCGTCGCGTCCGGAGGTTCAGCCCTCGCTGCCGCCGGAGCGATCATTGCCATAACTCAAAGCCCCAAAAATCCGTTTCTGGAAAATGCTATGAATTTTCTACTTTCCAATTTCTCACCTAACAAAAATCATTCATCCCCTTTGTGGGGTTCTGTTTCTCTAGCAGATAACTCAGCTCCGGTCACTGAATCGAGGACCGGAATGGCATTCCCCTCAATTCTGAAAGATACTCAGCGACTCCTTGGAATTGGGCTGCGTAAAAAGGCGGTTTTTGGATTGAAAAACATTGATGTCTATGCTTATG : GTGTGTATGCTGATGATGTTGATGTAAAGAGGTATCTGGCTGAGAAGCATGGACGGCGCTCTGTTTCTGAACTGCAGCAAAAGGAAGAGTTGAGAAATCATCTCATGGAAAACAATATACGCATGACTATCAGGCTTCAAATAGTCTATGGCAGGCTAAGCATTAATTCTGTGCGCAGTGCTTTCGAAGAATCTGTTGGCAGCAGATTACATAAGTTTGGGGGATGTGATAATAAGGAATTGCTTCAAAG : GTTCACTTCCCAGTTTAAGGATGAAATTAAATTACCTCGGGGATCTATCATTGAACTCTCCAGAGATCATGACTACATACTCCACACAACAA : TTGATGGAAAGGAAGTGGGAAGCATACAAAGCAAACTCTTATGCAGATCAATCCTAGACCTATATATTGGTGATGAGTCATTTGATCACAAAGCCAATGAAGATGTCGAGTCGAACTTGGCTTCTCTACTTCACAAGTAGCTACTTCTTTAGCATAAAGAGAATTTTATCAACACGAGGAATCAAGTTGTGGTGATTTATACTTAACGCATGTTAGCTTCTATTGGTTGGATGATTCTCTTTAAATAGTTGAACTAGAGAATTAATCTCTTGCAAACTGAACTTAGATCTATGTTTTATATGCTGATGAGTGGTTTTCTCTACTCCTGTAATATTTTGCTTTGCAATTTTTATAGCATGATTGAAATAAGTATGTTGGCTTGGTTACCAAATTTCTTTTATTTACCTCATTGAAATGCATCTTGGAGTGTTTACTGCTAAG</gDNA_template>
            <first_frame> I  R  S  N  H  S  K  *  K  I  K  N  G  F  S  S  F  S  I  L  V  S  S  A  P  Q  D  S  V  F  R  H  F  R  C  S  I  S  L  L  L  H  R  R  C  R  R  R  V  R  R  F  S  P  R  C  R  R  S  D  H  C  H  N  S  K  P  Q  K  S  V  S  G  K  C  Y  E  F  S  T  F  Q  F  L  T  *  Q  K  S  F  I  P  F  V  G  F  C  F  S  S  R  *  L  S  S  G  H  *  I  E  D  R  N  G  I  P  L  N  S  E  R  Y  S  A  T  P  W  N  W  A  A  *  K  G  G  F  W  I  E  K  H  *  C  L  C  L  W :   C  V  C  *  *  C  *  C  K  E  V  S  G  *  E  A  W  T  A  L  C  F  *  T  A  A  K  G  R  V  E  K  S  S  H  G  K  Q  Y  T  H  D  Y  Q  A  S  N  S  L  W  Q  A  K  H  *  F  C  A  Q  C  F  R  R  I  C  W  Q  Q  I  T  *  V  W  G  M  *  *  *  G  I  A  S  K  :  V  H  F  P  V  *  G  *  N  *  I  T  S  G  I  Y  H  *  T  L  Q  R  S  *  L  H  T  P  H  N  N :   *  W  K  G  S  G  K  H  T  K  Q  T  L  M  Q  I  N  P  R  P  I  Y  W  *  *  V  I  *  S  Q  S  Q  *  R  C  R  V  E  L  G  F  S  T  S  Q  V  A  T  S  L  A  *  R  E  F  Y  Q  H  E  E  S  S  C  G  D  L  Y  L  T  H  V  S  F  Y  W  L  D  D  S  L  *  I  V  E  L  E  N  *  S  L  A  N  *  T  *  I  Y  V  L  Y  A  D  E  W  F  S  L  L  L  *  Y  F  A  L  Q  F  L  *  H  D  *  N  K  Y  V  G  L  V  T  K  F  L  L  F  T  S  L  K  C  I  L  E  C  L  L  L   </first_frame>
            <second_frame>  Y  A  Q  T  I  V  N  K  K  *  K  M  A  S  L  R  F  P  F  L  F  P  Q  P  H  K  T  P  S  S  A  T  S  D  A  P  S  R  S  F  S  T  V  A  V  A  V  A  S  G  G  S  A  L  A  A  A  G  A  I  I  A  I  T  Q  S  P  K  N  P  F  L  E  N  A  M  N  F  L  L  S  N  F  S  P  N  K  N  H  S  S  P  L  W  G  S  V  S  L  A  D  N  S  A  P  V  T  E  S  R  T  G  M  A  F  P  S  I  L  K  D  T  Q  R  L  L  G  I  G  L  R  K  K  A  V  F  G  L  K  N  I  D  V  Y  A  Y   : G  V  Y  A  D  D  V  D  V  K  R  Y  L  A  E  K  H  G  R  R  S  V  S  E  L  Q  Q  K  E  E  L  R  N  H  L  M  E  N  N  I  R  M  T  I  R  L  Q  I  V  Y  G  R  L  S  I  N  S  V  R  S  A  F  E  E  S  V  G  S  R  L  H  K  F  G  G  C  D  N  K  E  L  L  Q  R :   F  T  S  Q  F  K  D  E  I  K  L  P  R  G  S  I  I  E  L  S  R  D  H  D  Y  I  L  H  T  T   : I  D  G  K  E  V  G  S  I  Q  S  K  L  L  C  R  S  I  L  D  L  Y  I  G  D  E  S  F  D  H  K  A  N  E  D  V  E  S  N  L  A  S  L  L  H  K  *  L  L  L  *  H  K  E  N  F  I  N  T  R  N  Q  V  V  V  I  Y  T  *  R  M  L  A  S  I  G  W  M  I  L  F  K  *  L  N  *  R  I  N  L  L  Q  T  E  L  R  S  M  F  Y  M  L  M  S  G  F  L  Y  S  C  N  I  L  L  C  N  F  Y  S  M  I  E  I  S  M  L  A  W  L  P  N  F  F  Y  L  P  H  *  N  A  S  W  S  V  Y  C  *  </second_frame>
            <third_frame>   T  L  K  P  *  *  I  K  N  K  K  W  L  L  F  V  F  H  S  C  F  L  S  P  T  R  L  R  L  P  P  L  Q  M  L  H  L  A  P  S  P  P  S  L  S  P  S  R  P  E  V  Q  P  S  L  P  P  E  R  S  L  P  *  L  K  A  P  K  I  R  F  W  K  M  L  *  I  F  Y  F  P  I  S  H  L  T  K  I  I  H  P  L  C  G  V  L  F  L  *  Q  I  T  Q  L  R  S  L  N  R  G  P  E  W  H  S  P  Q  F  *  K  I  L  S  D  S  L  E  L  G  C  V  K  R  R  F  L  D  *  K  T  L  M  S  M  L  M  :  V  C  M  L  M  M  L  M  *  R  G  I  W  L  R  S  M  D  G  A  L  F  L  N  C  S  K  R  K  S  *  E  I  I  S  W  K  T  I  Y  A  *  L  S  G  F  K  *  S  M  A  G  *  A  L  I  L  C  A  V  L  S  K  N  L  L  A  A  D  Y  I  S  L  G  D  V  I  I  R  N  C  F  K   : G  S  L  P  S  L  R  M  K  L  N  Y  L  G  D  L  S  L  N  S  P  E  I  M  T  T  Y  S  T  Q  Q  :  L  M  E  R  K  W  E  A  Y  K  A  N  S  Y  A  D  Q  S  *  T  Y  I  L  V  M  S  H  L  I  T  K  P  M  K  M  S  S  R  T  W  L  L  Y  F  T  S  S  Y  F  F  S  I  K  R  I  L  S  T  R  G  I  K  L  W  *  F  I  L  N  A  C  *  L  L  L  V  G  *  F  S  L  N  S  *  T  R  E  L  I  S  C  K  L  N  L  D  L  C  F  I  C  *  *  V  V  F  S  T  P  V  I  F  C  F  A  I  F  I  A  *  L  K  *  V  C  W  L  G  Y  Q  I  S  F  I  Y  L  I  E  M  H  L  G  V  F  T  A  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0021K07.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6280" stop="5872"/>
                    <exon start="4763" stop="4514"/>
                    <exon start="2636" stop="2545"/>
                    <exon start="1602" stop="1463"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>888</number_coding_nucleotides>
                  <number_encoded_amino_acids>296</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KMASLRFPFLFPQPHKTPSSATSDAPSRSFSTVAVAVASGGSALAAAGAIIAITQSPKNPFLENAMNFLLSNFSPNKNHSSPLWGSVSLADNSAPVTESRTGMAFPSILKDTQRLLGIGLRKKAVFGLKNIDVYAYGVYADDVDVKRYLAEKHGRRSVSELQQKEELRNHLMENNIRMTIRLQIVYGRLSINSVRSAFEESVGSRLHKFGGCDNKELLQRFTSQFKDEIKLPRGSIIELSRDHDYILHTTIDGKEVGSIQSKLLCRSILDLYIGDESFDHKANEDVESNLASLLHK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="10505" PGL_stop="7952"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="10505" e_stop="10486"/>
            <exon e_start="9361" e_stop="9298"/>
            <exon e_start="9216" e_stop="9137"/>
            <exon e_start="8715" e_stop="8651"/>
            <exon e_start="8567" e_stop="8450"/>
            <exon e_start="8373" e_stop="8249"/>
            <exon e_start="8141" e_stop="7952"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.030" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.731" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.184" acc_prob="0.908" e_score="1.000"/>
          <exon-intron don_prob="0.857" acc_prob="0.968" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="10505" e_stop="10486" e_length="20"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="0.998">
            <gDNA_intron_boundary i_start="10485" i_stop="9362" i_length="1124"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="9361" e_stop="9298" e_length="64"/>
          </exon>
          <intron i_serial="2" don_prob="0.030" acc_prob="0.981">
            <gDNA_intron_boundary i_start="9297" i_stop="9217" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="9216" e_stop="9137" e_length="80"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="9136" i_stop="8716" i_length="421"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="8715" e_stop="8651" e_length="65"/>
          </exon>
          <intron i_serial="4" don_prob="0.731" acc_prob="0.999">
            <gDNA_intron_boundary i_start="8650" i_stop="8568" i_length="83"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="8567" e_stop="8450" e_length="118"/>
          </exon>
          <intron i_serial="5" don_prob="0.184" acc_prob="0.908">
            <gDNA_intron_boundary i_start="8449" i_stop="8374" i_length="76"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="8373" e_stop="8249" e_length="125"/>
          </exon>
          <intron i_serial="6" don_prob="0.857" acc_prob="0.968">
            <gDNA_intron_boundary i_start="8248" i_stop="8142" i_length="107"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="8141" e_stop="7952" e_length="190"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10505" stop="10486"/>
              <exon start="9361" stop="9298"/>
              <exon start="9216" stop="9137"/>
              <exon start="8715" stop="8651"/>
              <exon start="8567" stop="8450"/>
              <exon start="8373" stop="8249"/>
              <exon start="8141" stop="7952"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318033" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTCCATCTCCTACACCTCAG : GTCTATCTGGGTGAGCTGTATGTAAATAATTCTACGCTATCTGATGTGACATTTTTAGTCGAAG : GCAAACGGTTTTATGCCCACAGAATTTGTTTACTTGCTTCTTCTGATGCATTTCGCGCAATGTTTGATGGTGGCTACAGG : GAGAGAGATGCCAAAGATATAGAGATTCCCAACATTCCATGGGATGTTTTTGAGTTGATGATGAG : GTACATATACACGGGATCTGTTGATGTTAATATGGGTGTTGCAAAGGATCTTCTAAGGGTTGCTGATCAATATCTTCTTGAGGGCCTTAAGCGTCTGTGCGAGTATGCAATTGCCCAG : GATATCTCAGTGGAAAATGTCTCTCTGATGTTTGAGTTATCAGAGGCTTTCAATGCATTGTCATTAAGAAATGCTTGCATTGTATTCACATTGGAGAAGTTCGACAAATTAAGTGTCATGCCATG : GTATTCGCAATTGATTCAACTTATATTACCTGAGACACGTGCGTACTTTGCTAGGGTGCTGAGCAGGCCAATTCAAGCTGACCTCTGATTTAGGTTCATTTTTATTCTTTGATTAGATGTAGTATATGATGTAAATTGTACAGGAAGTGGGTTTTATTCCACTCGTCTCTAATTGCAAGAGTTATGTGTC</gDNA_template>
            <first_frame> L  H  L  L  H  L  R :   S  I  W  V  S  C  M  *  I  I  L  R  Y  L  M  *  H  F  *  S  K  :  A  N  G  F  M  P  T  E  F  V  Y  L  L  L  L  M  H  F  A  Q  C  L  M  V  A  T  G :   R  E  M  P  K  I  *  R  F  P  T  F  H  G  M  F  L  S  *  *  *   : G  T  Y  T  R  D  L  L  M  L  I  W  V  L  Q  R  I  F  *  G  L  L  I  N  I  F  L  R  A  L  S  V  C  A  S  M  Q  L  P  R :   I  S  Q  W  K  M  S  L  *  C  L  S  Y  Q  R  L  S  M  H  C  H  *  E  M  L  A  L  Y  S  H  W  R  S  S  T  N  *  V  S  C  H   : G  I  R  N  *  F  N  L  Y  Y  L  R  H  V  R  T  L  L  G  C  *  A  G  Q  F  K  L  T  S  D  L  G  S  F  L  F  F  D  *  M  *  Y  M  M  *  I  V  Q  E  V  G  F  I  P  L  V  S  N  C  K  S  Y  V   </first_frame>
            <second_frame>  S  I  S  Y  T  S   : G  L  S  G  *  A  V  C  K  *  F  Y  A  I  *  C  D  I  F  S  R  R :   Q  T  V  L  C  P  Q  N  L  F  T  C  F  F  *  C  I  S  R  N  V  *  W  W  L  Q   : G  E  R  C  Q  R  Y  R  D  S  Q  H  S  M  G  C  F  *  V  D  D  E  :  V  H  I  H  G  I  C  *  C  *  Y  G  C  C  K  G  S  S  K  G  C  *  S  I  S  S  *  G  P  *  A  S  V  R  V  C  N  C  P   : G  Y  L  S  G  K  C  L  S  D  V  *  V  I  R  G  F  Q  C  I  V  I  K  K  C  L  H  C  I  H  I  G  E  V  R  Q  I  K  C  H  A  M  :  V  F  A  I  D  S  T  Y  I  T  *  D  T  C  V  L  C  *  G  A  E  Q  A  N  S  S  *  P  L  I  *  V  H  F  Y  S  L  I  R  C  S  I  *  C  K  L  Y  R  K  W  V  L  F  H  S  S  L  I  A  R  V  M  C  </second_frame>
            <third_frame>   P  S  P  T  P  Q  :  V  Y  L  G  E  L  Y  V  N  N  S  T  L  S  D  V  T  F  L  V  E   : G  K  R  F  Y  A  H  R  I  C  L  L  A  S  S  D  A  F  R  A  M  F  D  G  G  Y  R  :  E  R  D  A  K  D  I  E  I  P  N  I  P  W  D  V  F  E  L  M  M  R :   Y  I  Y  T  G  S  V  D  V  N  M  G  V  A  K  D  L  L  R  V  A  D  Q  Y  L  L  E  G  L  K  R  L  C  E  Y  A  I  A  Q  :  D  I  S  V  E  N  V  S  L  M  F  E  L  S  E  A  F  N  A  L  S  L  R  N  A  C  I  V  F  T  L  E  K  F  D  K  L  S  V  M  P  W :   Y  S  Q  L  I  Q  L  I  L  P  E  T  R  A  Y  F  A  R  V  L  S  R  P  I  Q  A  D  L  *  F  R  F  I  F  I  L  *  L  D  V  V  Y  D  V  N  C  T  G  S  G  F  Y  S  T  R  L  *  L  Q  E  L  C  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0021K07.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10503" stop="10486"/>
                    <exon start="9361" stop="9298"/>
                    <exon start="9216" stop="9137"/>
                    <exon start="8715" stop="8651"/>
                    <exon start="8567" stop="8450"/>
                    <exon start="8373" stop="8249"/>
                    <exon start="8141" stop="8054"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>555</number_coding_nucleotides>
                  <number_encoded_amino_acids>185</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PSPTPQVYLGELYVNNSTLSDVTFLVEGKRFYAHRICLLASSDAFRAMFDGGYRERDAKDIEIPNIPWDVFELMMRYIYTGSVDVNMGVAKDLLRVADQYLLEGLKRLCEYAIAQDISVENVSLMFELSEAFNALSLRNACIVFTLEKFDKLSVMPWYSQLIQLILPETRAYFARVLSRPIQADL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="19293" PGL_stop="20104"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="19293" e_stop="19886"/>
            <exon e_start="19985" e_stop="20104"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.722" e_score="0.921"/>
          <exon-only e_score="0.900"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.921">
            <gDNA_exon_boundary e_start="19293" e_stop="19886" e_length="594"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.722">
            <gDNA_intron_boundary i_start="19887" i_stop="19984" i_length="98"/>
          </intron>
          <exon e_serial="2" e_score="0.900">
            <gDNA_exon_boundary e_start="19985" e_stop="20104" e_length="120"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19293" stop="19886"/>
              <exon start="19985" stop="20104"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U339439" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAACGTCGCGACAACTCGAAAAATAATTAATTGATTCAATTTTAACAAAATTAAAAAATAAACGAGTTTTAAAAAAGAGTCGCCACCTAATTTTTTAGGAAAACTAGGAAACCAATTATTAATCTACGAAACCAAATTGATTCTTAGGTAAGGGGTTCAAGTTATTCCGAAGGGAAGGGGTTAGGCACCCTTCGGAATCCACAAATGTGGTTCCCGACTGAATTCATTTTTTTTTCAAATTGAGGAAAGATATAAAATAAACACATATAATAAACACACAATATACACAATAAAGCAATAATTATCGGCCTAAAGTTTGTCTAACGTCAATATTCACAAAATAATGAATGAAATACAATTCGAACTTTTCGAATAATTTCAATGAGAAGCACCTCCGGGTACCTGTAAAGACACTTAGTAAAAGAGTTATTGTCAAAATAATATAAATAAAAATAAATAACTCAAATAATAACTAAAATAAAAATCCGTCTTATTAACATGGGAGGCCTTGGAAATCGACGGTTATTTCTTCATCGGCCACTTTCAACATATAAAATATATAAACTTGAATTGAAATTCCGTCCTTTTAAAATG : GGAAGACCTCTAAACCCGACGGATAGATTTTTCATCGGCCTTTCAACATATAAAATATATAAACTTGAATTAAAATTCCGTCTTTTTAAAATGGGGAGGCCTCTAAGCCCGACGGATAGA</gDNA_template>
            <first_frame> K  R  R  D  N  S  K  N  N  *  L  I  Q  F  *  Q  N  *  K  I  N  E  F  *  K  R  V  A  T  *  F  F  R  K  T  R  K  P  I  I  N  L  R  N  Q  I  D  S  *  V  R  G  S  S  Y  S  E  G  K  G  L  G  T  L  R  N  P  Q  M  W  F  P  T  E  F  I  F  F  S  N  *  G  K  I  *  N  K  H  I  *  *  T  H  N  I  H  N  K  A  I  I  I  G  L  K  F  V  *  R  Q  Y  S  Q  N  N  E  *  N  T  I  R  T  F  R  I  I  S  M  R  S  T  S  G  Y  L  *  R  H  L  V  K  E  L  L  S  K  *  Y  K  *  K  *  I  T  Q  I  I  T  K  I  K  I  R  L  I  N  M  G  G  L  G  N  R  R  L  F  L  H  R  P  L  S  T  Y  K  I  Y  K  L  E  L  K  F  R  P  F  K  M  :  G  R  P  L  N  P  T  D  R  F  F  I  G  L  S  T  Y  K  I  Y  K  L  E  L  K  F  R  L  F  K  M  G  R  P  L  S  P  T  D  R </first_frame>
            <second_frame>  N  V  A  T  T  R  K  I  I  N  *  F  N  F  N  K  I  K  K  *  T  S  F  K  K  E  S  P  P  N  F  L  G  K  L  G  N  Q  L  L  I  Y  E  T  K  L  I  L  R  *  G  V  Q  V  I  P  K  G  R  G  *  A  P  F  G  I  H  K  C  G  S  R  L  N  S  F  F  F  Q  I  E  E  R  Y  K  I  N  T  Y  N  K  H  T  I  Y  T  I  K  Q  *  L  S  A  *  S  L  S  N  V  N  I  H  K  I  M  N  E  I  Q  F  E  L  F  E  *  F  Q  *  E  A  P  P  G  T  C  K  D  T  *  *  K  S  Y  C  Q  N  N  I  N  K  N  K  *  L  K  *  *  L  K  *  K  S  V  L  L  T  W  E  A  L  E  I  D  G  Y  F  F  I  G  H  F  Q  H  I  K  Y  I  N  L  N  *  N  S  V  L  L  K  W :   E  D  L  *  T  R  R  I  D  F  S  S  A  F  Q  H  I  K  Y  I  N  L  N  *  N  S  V  F  L  K  W  G  G  L  *  A  R  R  I   </second_frame>
            <third_frame>   T  S  R  Q  L  E  K  *  L  I  D  S  I  L  T  K  L  K  N  K  R  V  L  K  K  S  R  H  L  I  F  *  E  N  *  E  T  N  Y  *  S  T  K  P  N  *  F  L  G  K  G  F  K  L  F  R  R  E  G  V  R  H  P  S  E  S  T  N  V  V  P  D  *  I  H  F  F  F  K  L  R  K  D  I  K  *  T  H  I  I  N  T  Q  Y  T  Q  *  S  N  N  Y  R  P  K  V  C  L  T  S  I  F  T  K  *  *  M  K  Y  N  S  N  F  S  N  N  F  N  E  K  H  L  R  V  P  V  K  T  L  S  K  R  V  I  V  K  I  I  *  I  K  I  N  N  S  N  N  N  *  N  K  N  P  S  Y  *  H  G  R  P  W  K  S  T  V  I  S  S  S  A  T  F  N  I  *  N  I  *  T  *  I  E  I  P  S  F  *  N   : G  K  T  S  K  P  D  G  *  I  F  H  R  P  F  N  I  *  N  I  *  T  *  I  K  I  P  S  F  *  N  G  E  A  S  K  P  D  G  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0021K07.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19749" stop="19886"/>
                    <exon start="19985" stop="20104"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ITQIITKIKIRLINMGGLGNRRLFLHRPLSTYKIYKLELKFRPFKMGRPLNPTDRFFIGLSTYKIYKLELKFRLFKMGRPLSPTDR</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="41056" PGL_stop="45956"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="41056" e_stop="41155"/>
            <exon e_start="41495" e_stop="41563"/>
            <exon e_start="41653" e_stop="41741"/>
            <exon e_start="41856" e_stop="42159"/>
            <exon e_start="42234" e_stop="42417"/>
            <exon e_start="42770" e_stop="42984"/>
            <exon e_start="43063" e_stop="43183"/>
            <exon e_start="43329" e_stop="43441"/>
            <exon e_start="43635" e_stop="43861"/>
            <exon e_start="43946" e_stop="44061"/>
            <exon e_start="44614" e_stop="44712"/>
            <exon e_start="44823" e_stop="45059"/>
            <exon e_start="45129" e_stop="45240"/>
            <exon e_start="45352" e_stop="45540"/>
            <exon e_start="45729" e_stop="45956"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.898" acc_prob="0.833" e_score="1.000"/>
          <exon-intron don_prob="0.875" acc_prob="0.986" e_score="0.978"/>
          <exon-intron don_prob="0.969" acc_prob="0.999" e_score="0.997"/>
          <exon-intron don_prob="1.000" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.986" e_score="0.967"/>
          <exon-intron don_prob="0.989" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="0.996"/>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.983" e_score="0.996"/>
          <exon-intron don_prob="0.995" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="41056" e_stop="41155" e_length="100"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.972">
            <gDNA_intron_boundary i_start="41156" i_stop="41494" i_length="339"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="41495" e_stop="41563" e_length="69"/>
          </exon>
          <intron i_serial="2" don_prob="0.898" acc_prob="0.833">
            <gDNA_intron_boundary i_start="41564" i_stop="41652" i_length="89"/>
          </intron>
          <exon e_serial="3" e_score="0.978">
            <gDNA_exon_boundary e_start="41653" e_stop="41741" e_length="89"/>
          </exon>
          <intron i_serial="3" don_prob="0.875" acc_prob="0.986">
            <gDNA_intron_boundary i_start="41742" i_stop="41855" i_length="114"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="41856" e_stop="42159" e_length="304"/>
          </exon>
          <intron i_serial="4" don_prob="0.969" acc_prob="0.999">
            <gDNA_intron_boundary i_start="42160" i_stop="42233" i_length="74"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="42234" e_stop="42417" e_length="184"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.988">
            <gDNA_intron_boundary i_start="42418" i_stop="42769" i_length="352"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="42770" e_stop="42984" e_length="215"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.980">
            <gDNA_intron_boundary i_start="42985" i_stop="43062" i_length="78"/>
          </intron>
          <exon e_serial="7" e_score="0.967">
            <gDNA_exon_boundary e_start="43063" e_stop="43183" e_length="121"/>
          </exon>
          <intron i_serial="7" don_prob="0.983" acc_prob="0.986">
            <gDNA_intron_boundary i_start="43184" i_stop="43328" i_length="145"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="43329" e_stop="43441" e_length="113"/>
          </exon>
          <intron i_serial="8" don_prob="0.989" acc_prob="0.991">
            <gDNA_intron_boundary i_start="43442" i_stop="43634" i_length="193"/>
          </intron>
          <exon e_serial="9" e_score="0.996">
            <gDNA_exon_boundary e_start="43635" e_stop="43861" e_length="227"/>
          </exon>
          <intron i_serial="9" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="43862" i_stop="43945" i_length="84"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="43946" e_stop="44061" e_length="116"/>
          </exon>
          <intron i_serial="10" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="44062" i_stop="44613" i_length="552"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="44614" e_stop="44712" e_length="99"/>
          </exon>
          <intron i_serial="11" don_prob="0.980" acc_prob="0.999">
            <gDNA_intron_boundary i_start="44713" i_stop="44822" i_length="110"/>
          </intron>
          <exon e_serial="12" e_score="0.996">
            <gDNA_exon_boundary e_start="44823" e_stop="45059" e_length="237"/>
          </exon>
          <intron i_serial="12" don_prob="0.997" acc_prob="0.983">
            <gDNA_intron_boundary i_start="45060" i_stop="45128" i_length="69"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="45129" e_stop="45240" e_length="112"/>
          </exon>
          <intron i_serial="13" don_prob="0.995" acc_prob="0.999">
            <gDNA_intron_boundary i_start="45241" i_stop="45351" i_length="111"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="45352" e_stop="45540" e_length="189"/>
          </exon>
          <intron i_serial="14" don_prob="0.999" acc_prob="0.992">
            <gDNA_intron_boundary i_start="45541" i_stop="45728" i_length="188"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="45729" e_stop="45956" e_length="228"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41056" stop="41155"/>
              <exon start="41495" stop="41563"/>
              <exon start="41653" stop="41741"/>
              <exon start="41856" stop="42159"/>
              <exon start="42234" stop="42417"/>
              <exon start="42770" stop="42984"/>
              <exon start="43063" stop="43183"/>
              <exon start="43329" stop="43441"/>
              <exon start="43635" stop="43861"/>
              <exon start="43946" stop="44061"/>
              <exon start="44614" stop="44712"/>
              <exon start="44823" stop="45059"/>
              <exon start="45129" stop="45240"/>
              <exon start="45352" stop="45540"/>
              <exon start="45729" stop="45956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U341639" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATGTCGATCTCAGCTTCTTTTTTAAGATTTAGCCTCACTGCTCACTATCAACCTTCTCCTTCTTCTTCTCCACCAAATCAACCTTTCAAATTCCTTAAAA : GCAACAGAGAACATGTTGAATTCAATCGAATTTTGCAATGTCATGCTGTTTCTAGACGTCGTACAAAAG : ATTACAAAGAGGTGCAAAGTGGTTCGTTGCCGGTTATCAAGTGGGACGACATCGCAGAGGAAGTGGACGTGGAAACACACACACTTGAG : GTGTACGATCCATCCTCCAACGAGGACCATATCGATGCTATTCGATCGATGCTAGGATCAATGGGAGACGGAGAAATAAGCGTCTCGGCCTATGACACAGCATGGGTTGCCATGGTGAAAGATGTGAAGGGAACTGAAACTCCTCAGTTCCCTTCAAGCCTTGAGTGGATTGCGAACAATCAGTTGGCTGATGGTTCATGGGGTGACAACTCCATTTTCTTGGTTTATGATCGTGTCATCAACACATTGGCTTGTGTTATTGCCTTGAAGTCATGGAACTTGCATCCTGACAAGATTCTACTTG : GAATGTCGTTTATGAGAGAGAATTTGAGCAGGATTGGTGATGAGAATGCAGAGCACATGCCTATAGGCTTCGAAGTGGCATTTCCTTCACTCATTGAGATTGCTAAAAAGTTAGGCTTAGATTTTCCTTATGATTCTCCCGTCTTGCAAGACATCTATGCCAGTAGACAACTAAAGCTTACAAG : GATACCAAAGGACATCATGCACAAAGTCCCCACAACTTTACTCCACAGTTTGGAAGGAATGACAGATTTGGACTGGCAAAAGTTGCTTCAATTTCAGTGCACTGATGGCTCTTTTCTCTTCTCTCCATCTTCCACCGCATATGCACTTATGCAAACTCAAGATCATAATTGTCTCAATTATCTCAAAAATGCTGTCCACAAATTCAACGGCGGAG : TTCCAAATGTGTATCCAGTGGACCTATTTGAACATATTTGGACCGTTGATCGGTTGCAAAGGCTTGGAATTTCTCGGTATTTTGAGCTAGAAATAAAAGAGTGCATTGATTACGTTAGCAG : ATATTGGACAAATAAAGGAATCTGCTGGGCTAGAAATTCCCCAGTTCAAGACATTGATGACACGGCTATGGCTTTTAGACTTTTGCGCTTGCATGGCTACGCTGTTTCTGCTG : ACGTATTCAAACATTTTGAGAGCAAAGGCGAATTTTTCTGCTTCGTGGGGCAATCAAATCAAGCAGTGACAGGAATGTATAATCTTTATAGGGCATCTCATGTAATGTTCTCAGGAGAGAAAATACTTGAAAATGCAAAAATATTCACTTCTAATTATCTAAGAGAAAAACGAGCTCAAAATCAACTGCTAGACAAGTGGATCATTACTAAAGATTTACCTGGAGAG : GTGGGATATGCATTAGATGTGCCATGGTATGCTAGCCTACCCCGCCTAGAAACAAGGTTCTTTTTAGAACATTATGGTGGTGAAGATGACGTGTGGATTGGCAAAACATTGTACAG : GATGCCATTGGTTAACAATAGCCTATACCTAGAGCTAGCGAAATCGGACTATAACAATTGCCAAGCTTTGCACCAGTTCGAGTGGAGAAGAATTCGCAA : GTGGTACTACGAATGCGGGCTAGGAGAGTTTGGATTAAGTGAAAAAAGGTTGTTGGTTACGTACTATTTAGGCAGTGCTAGTATATTTGAGGCACAAAGGTCGACCGAGCGAATGGCTTGGGTCAAAACCGCAGCTCTTATGGACTGTGTGAGGTCTTGTTTTGGCTCCCCACAAGTATCTGCAGCTGCATTTCTTTGCGAATTCGCACACTACTCTAGCACCGCTCTGAATTCGAG : GTACAACACAGAAGATAGGCTCGTTGGGGTCATTCTTGGAACCCTAAATCATCTCTCACTGAGTGCCTTATTAACACATGGCAGAGACATCCATCACTACTTGCGTCATGCT : TGGGAAAATTGGCTACTGACGGTAGGAGAAGGAGAAGGAGAAGGAGAAGGAGGTGCTGAACTCATAATTCGCACCTTAAATTTGTGCAGTGTTCATTGGATATCGGAGGAGATATTGTTGTCCCATCCAACTTACCAAAAGCTATTGGAAATTACCAATAGAGTTTCTCACCGACTCCGTCTCTACAAG : GGACACAGTGAAAAGCAGGTAGGAATGTTGACTTTTAGTGAAGAAATAGAAGGTGACATGCAACAGCTAGCAGAGCTCGTGCTATCTCATTCAGATGCTTCCGAATTGGATGCCAATATCAAAGACACTTTTCTCACTGTTGCCAAAAGTTTTTACTACTCAGCTTATTGTGATGATCGAACAATTAACTTTCACATAGCCAAAGTGCTATTTGAAAGAGTAGTTTAA</gDNA_template>
            <first_frame> M  S  I  S  A  S  F  L  R  F  S  L  T  A  H  Y  Q  P  S  P  S  S  S  P  P  N  Q  P  F  K  F  L  K   : S  N  R  E  H  V  E  F  N  R  I  L  Q  C  H  A  V  S  R  R  R  T  K   : D  Y  K  E  V  Q  S  G  S  L  P  V  I  K  W  D  D  I  A  E  E  V  D  V  E  T  H  T  L  E  :  V  Y  D  P  S  S  N  E  D  H  I  D  A  I  R  S  M  L  G  S  M  G  D  G  E  I  S  V  S  A  Y  D  T  A  W  V  A  M  V  K  D  V  K  G  T  E  T  P  Q  F  P  S  S  L  E  W  I  A  N  N  Q  L  A  D  G  S  W  G  D  N  S  I  F  L  V  Y  D  R  V  I  N  T  L  A  C  V  I  A  L  K  S  W  N  L  H  P  D  K  I  L  L   : G  M  S  F  M  R  E  N  L  S  R  I  G  D  E  N  A  E  H  M  P  I  G  F  E  V  A  F  P  S  L  I  E  I  A  K  K  L  G  L  D  F  P  Y  D  S  P  V  L  Q  D  I  Y  A  S  R  Q  L  K  L  T  R :   I  P  K  D  I  M  H  K  V  P  T  T  L  L  H  S  L  E  G  M  T  D  L  D  W  Q  K  L  L  Q  F  Q  C  T  D  G  S  F  L  F  S  P  S  S  T  A  Y  A  L  M  Q  T  Q  D  H  N  C  L  N  Y  L  K  N  A  V  H  K  F  N  G  G   : V  P  N  V  Y  P  V  D  L  F  E  H  I  W  T  V  D  R  L  Q  R  L  G  I  S  R  Y  F  E  L  E  I  K  E  C  I  D  Y  V  S  R :   Y  W  T  N  K  G  I  C  W  A  R  N  S  P  V  Q  D  I  D  D  T  A  M  A  F  R  L  L  R  L  H  G  Y  A  V  S  A   : D  V  F  K  H  F  E  S  K  G  E  F  F  C  F  V  G  Q  S  N  Q  A  V  T  G  M  Y  N  L  Y  R  A  S  H  V  M  F  S  G  E  K  I  L  E  N  A  K  I  F  T  S  N  Y  L  R  E  K  R  A  Q  N  Q  L  L  D  K  W  I  I  T  K  D  L  P  G  E  :  V  G  Y  A  L  D  V  P  W  Y  A  S  L  P  R  L  E  T  R  F  F  L  E  H  Y  G  G  E  D  D  V  W  I  G  K  T  L  Y  R :   M  P  L  V  N  N  S  L  Y  L  E  L  A  K  S  D  Y  N  N  C  Q  A  L  H  Q  F  E  W  R  R  I  R  K :   W  Y  Y  E  C  G  L  G  E  F  G  L  S  E  K  R  L  L  V  T  Y  Y  L  G  S  A  S  I  F  E  A  Q  R  S  T  E  R  M  A  W  V  K  T  A  A  L  M  D  C  V  R  S  C  F  G  S  P  Q  V  S  A  A  A  F  L  C  E  F  A  H  Y  S  S  T  A  L  N  S  R :   Y  N  T  E  D  R  L  V  G  V  I  L  G  T  L  N  H  L  S  L  S  A  L  L  T  H  G  R  D  I  H  H  Y  L  R  H  A  :  W  E  N  W  L  L  T  V  G  E  G  E  G  E  G  E  G  G  A  E  L  I  I  R  T  L  N  L  C  S  V  H  W  I  S  E  E  I  L  L  S  H  P  T  Y  Q  K  L  L  E  I  T  N  R  V  S  H  R  L  R  L  Y  K  :  G  H  S  E  K  Q  V  G  M  L  T  F  S  E  E  I  E  G  D  M  Q  Q  L  A  E  L  V  L  S  H  S  D  A  S  E  L  D  A  N  I  K  D  T  F  L  T  V  A  K  S  F  Y  Y  S  A  Y  C  D  D  R  T  I  N  F  H  I  A  K  V  L  F  E  R  V  V  * </first_frame>
            <second_frame>  C  R  S  Q  L  L  F  *  D  L  A  S  L  L  T  I  N  L  L  L  L  L  L  H  Q  I  N  L  S  N  S  L  K  :  A  T  E  N  M  L  N  S  I  E  F  C  N  V  M  L  F  L  D  V  V  Q  K  :  I  T  K  R  C  K  V  V  R  C  R  L  S  S  G  T  T  S  Q  R  K  W  T  W  K  H  T  H  L  R :   C  T  I  H  P  P  T  R  T  I  S  M  L  F  D  R  C  *  D  Q  W  E  T  E  K  *  A  S  R  P  M  T  Q  H  G  L  P  W  *  K  M  *  R  E  L  K  L  L  S  S  L  Q  A  L  S  G  L  R  T  I  S  W  L  M  V  H  G  V  T  T  P  F  S  W  F  M  I  V  S  S  T  H  W  L  V  L  L  P  *  S  H  G  T  C  I  L  T  R  F  Y  L  :  E  C  R  L  *  E  R  I  *  A  G  L  V  M  R  M  Q  S  T  C  L  *  A  S  K  W  H  F  L  H  S  L  R  L  L  K  S  *  A  *  I  F  L  M  I  L  P  S  C  K  T  S  M  P  V  D  N  *  S  L  Q   : G  Y  Q  R  T  S  C  T  K  S  P  Q  L  Y  S  T  V  W  K  E  *  Q  I  W  T  G  K  S  C  F  N  F  S  A  L  M  A  L  F  S  S  L  H  L  P  P  H  M  H  L  C  K  L  K  I  I  I  V  S  I  I  S  K  M  L  S  T  N  S  T  A  E  :  F  Q  M  C  I  Q  W  T  Y  L  N  I  F  G  P  L  I  G  C  K  G  L  E  F  L  G  I  L  S  *  K  *  K  S  A  L  I  T  L  A   : D  I  G  Q  I  K  E  S  A  G  L  E  I  P  Q  F  K  T  L  M  T  R  L  W  L  L  D  F  C  A  C  M  A  T  L  F  L  L  :  T  Y  S  N  I  L  R  A  K  A  N  F  S  A  S  W  G  N  Q  I  K  Q  *  Q  E  C  I  I  F  I  G  H  L  M  *  C  S  Q  E  R  K  Y  L  K  M  Q  K  Y  S  L  L  I  I  *  E  K  N  E  L  K  I  N  C  *  T  S  G  S  L  L  K  I  Y  L  E  R :   W  D  M  H  *  M  C  H  G  M  L  A  Y  P  A  *  K  Q  G  S  F  *  N  I  M  V  V  K  M  T  C  G  L  A  K  H  C  T   : G  C  H  W  L  T  I  A  Y  T  *  S  *  R  N  R  T  I  T  I  A  K  L  C  T  S  S  S  G  E  E  F  A   : S  G  T  T  N  A  G  *  E  S  L  D  *  V  K  K  G  C  W  L  R  T  I  *  A  V  L  V  Y  L  R  H  K  G  R  P  S  E  W  L  G  S  K  P  Q  L  L  W  T  V  *  G  L  V  L  A  P  H  K  Y  L  Q  L  H  F  F  A  N  S  H  T  T  L  A  P  L  *  I  R   : G  T  T  Q  K  I  G  S  L  G  S  F  L  E  P  *  I  I  S  H  *  V  P  Y  *  H  M  A  E  T  S  I  T  T  C  V  M  L :   G  K  I  G  Y  *  R  *  E  K  E  K  E  K  E  K  E  V  L  N  S  *  F  A  P  *  I  C  A  V  F  I  G  Y  R  R  R  Y  C  C  P  I  Q  L  T  K  S  Y  W  K  L  P  I  E  F  L  T  D  S  V  S  T  R :   D  T  V  K  S  R  *  E  C  *  L  L  V  K  K  *  K  V  T  C  N  S  *  Q  S  S  C  Y  L  I  Q  M  L  P  N  W  M  P  I  S  K  T  L  F  S  L  L  P  K  V  F  T  T  Q  L  I  V  M  I  E  Q  L  T  F  T  *  P  K  C  Y  L  K  E  *  F   </second_frame>
            <third_frame>   V  D  L  S  F  F  F  K  I  *  P  H  C  S  L  S  T  F  S  F  F  F  S  T  K  S  T  F  Q  I  P  *  K :   Q  Q  R  T  C  *  I  Q  S  N  F  A  M  S  C  C  F  *  T  S  Y  K  R :   L  Q  R  G  A  K  W  F  V  A  G  Y  Q  V  G  R  H  R  R  G  S  G  R  G  N  T  H  T  *   : G  V  R  S  I  L  Q  R  G  P  Y  R  C  Y  S  I  D  A  R  I  N  G  R  R  R  N  K  R  L  G  L  *  H  S  M  G  C  H  G  E  R  C  E  G  N  *  N  S  S  V  P  F  K  P  *  V  D  C  E  Q  S  V  G  *  W  F  M  G  *  Q  L  H  F  L  G  L  *  S  C  H  Q  H  I  G  L  C  Y  C  L  E  V  M  E  L  A  S  *  Q  D  S  T  W :   N  V  V  Y  E  R  E  F  E  Q  D  W  *  *  E  C  R  A  H  A  Y  R  L  R  S  G  I  S  F  T  H  *  D  C  *  K  V  R  L  R  F  S  L  *  F  S  R  L  A  R  H  L  C  Q  *  T  T  K  A  Y  K  :  D  T  K  G  H  H  A  Q  S  P  H  N  F  T  P  Q  F  G  R  N  D  R  F  G  L  A  K  V  A  S  I  S  V  H  *  W  L  F  S  L  L  S  I  F  H  R  I  C  T  Y  A  N  S  R  S  *  L  S  Q  L  S  Q  K  C  C  P  Q  I  Q  R  R  S :   S  K  C  V  S  S  G  P  I  *  T  Y  L  D  R  *  S  V  A  K  A  W  N  F  S  V  F  *  A  R  N  K  R  V  H  *  L  R  *  Q  :  I  L  D  K  *  R  N  L  L  G  *  K  F  P  S  S  R  H  *  *  H  G  Y  G  F  *  T  F  A  L  A  W  L  R  C  F  C  * :   R  I  Q  T  F  *  E  Q  R  R  I  F  L  L  R  G  A  I  K  S  S  S  D  R  N  V  *  S  L  *  G  I  S  C  N  V  L  R  R  E  N  T  *  K  C  K  N  I  H  F  *  L  S  K  R  K  T  S  S  K  S  T  A  R  Q  V  D  H  Y  *  R  F  T  W  R   : G  G  I  C  I  R  C  A  M  V  C  *  P  T  P  P  R  N  K  V  L  F  R  T  L  W  W  *  R  *  R  V  D  W  Q  N  I  V  Q  :  D  A  I  G  *  Q  *  P  I  P  R  A  S  E  I  G  L  *  Q  L  P  S  F  A  P  V  R  V  E  K  N  S  Q  :  V  V  L  R  M  R  A  R  R  V  W  I  K  *  K  K  V  V  G  Y  V  L  F  R  Q  C  *  Y  I  *  G  T  K  V  D  R  A  N  G  L  G  Q  N  R  S  S  Y  G  L  C  E  V  L  F  W  L  P  T  S  I  C  S  C  I  S  L  R  I  R  T  L  L  *  H  R  S  E  F  E  :  V  Q  H  R  R  *  A  R  W  G  H  S  W  N  P  K  S  S  L  T  E  C  L  I  N  T  W  Q  R  H  P  S  L  L  A  S  C   : L  G  K  L  A  T  D  G  R  R  R  R  R  R  R  R  R  R  C  *  T  H  N  S  H  L  K  F  V  Q  C  S  L  D  I  G  G  D  I  V  V  P  S  N  L  P  K  A  I  G  N  Y  Q  *  S  F  S  P  T  P  S  L  Q   : G  T  Q  *  K  A  G  R  N  V  D  F  *  *  R  N  R  R  *  H  A  T  A  S  R  A  R  A  I  S  F  R  C  F  R  I  G  C  Q  Y  Q  R  H  F  S  H  C  C  Q  K  F  L  L  L  S  L  L  *  *  S  N  N  *  L  S  H  S  Q  S  A  I  *  K  S  S  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0021K07.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41056" stop="41155"/>
                    <exon start="41495" stop="41563"/>
                    <exon start="41653" stop="41741"/>
                    <exon start="41856" stop="42159"/>
                    <exon start="42234" stop="42417"/>
                    <exon start="42770" stop="42984"/>
                    <exon start="43063" stop="43183"/>
                    <exon start="43329" stop="43441"/>
                    <exon start="43635" stop="43861"/>
                    <exon start="43946" stop="44061"/>
                    <exon start="44614" stop="44712"/>
                    <exon start="44823" stop="45059"/>
                    <exon start="45129" stop="45240"/>
                    <exon start="45352" stop="45540"/>
                    <exon start="45729" stop="45956"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>2400</number_coding_nucleotides>
                  <number_encoded_amino_acids>800</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MSISASFLRFSLTAHYQPSPSSSPPNQPFKFLKSNREHVEFNRILQCHAVSRRRTKDYKEVQSGSLPVIKWDDIAEEVDVETHTLEVYDPSSNEDHIDAIRSMLGSMGDGEISVSAYDTAWVAMVKDVKGTETPQFPSSLEWIANNQLADGSWGDNSIFLVYDRVINTLACVIALKSWNLHPDKILLGMSFMRENLSRIGDENAEHMPIGFEVAFPSLIEIAKKLGLDFPYDSPVLQDIYASRQLKLTRIPKDIMHKVPTTLLHSLEGMTDLDWQKLLQFQCTDGSFLFSPSSTAYALMQTQDHNCLNYLKNAVHKFNGGVPNVYPVDLFEHIWTVDRLQRLGISRYFELEIKECIDYVSRYWTNKGICWARNSPVQDIDDTAMAFRLLRLHGYAVSADVFKHFESKGEFFCFVGQSNQAVTGMYNLYRASHVMFSGEKILENAKIFTSNYLREKRAQNQLLDKWIITKDLPGEVGYALDVPWYASLPRLETRFFLEHYGGEDDVWIGKTLYRMPLVNNSLYLELAKSDYNNCQALHQFEWRRIRKWYYECGLGEFGLSEKRLLVTYYLGSASIFEAQRSTERMAWVKTAALMDCVRSCFGSPQVSAAAFLCEFAHYSSTALNSRYNTEDRLVGVILGTLNHLSLSALLTHGRDIHHYLRHAWENWLLTVGEGEGEGEGGAELIIRTLNLCSVHWISEEILLSHPTYQKLLEITNRVSHRLRLYKGHSEKQVGMLTFSEEIEGDMQQLAELVLSHSDASELDANIKDTFLTVAKSFYYSAYCDDRTINFHIAKVLFERVV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="49956" PGL_stop="52852"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="49956" e_stop="50055"/>
            <exon e_start="50165" e_stop="50239"/>
            <exon e_start="50357" e_stop="50398"/>
            <exon e_start="51228" e_stop="51398"/>
            <exon e_start="52407" e_stop="52493"/>
            <exon e_start="52601" e_stop="52852"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.967" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.824" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.963" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="49956" e_stop="50055" e_length="100"/>
          </exon>
          <intron i_serial="1" don_prob="0.967" acc_prob="0.998">
            <gDNA_intron_boundary i_start="50056" i_stop="50164" i_length="109"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="50165" e_stop="50239" e_length="75"/>
          </exon>
          <intron i_serial="2" don_prob="0.824" acc_prob="0.996">
            <gDNA_intron_boundary i_start="50240" i_stop="50356" i_length="117"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="50357" e_stop="50398" e_length="42"/>
          </exon>
          <intron i_serial="3" don_prob="0.963" acc_prob="0.999">
            <gDNA_intron_boundary i_start="50399" i_stop="51227" i_length="829"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="51228" e_stop="51398" e_length="171"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.984">
            <gDNA_intron_boundary i_start="51399" i_stop="52406" i_length="1008"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="52407" e_stop="52493" e_length="87"/>
          </exon>
          <intron i_serial="5" don_prob="0.977" acc_prob="0.999">
            <gDNA_intron_boundary i_start="52494" i_stop="52600" i_length="107"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="52601" e_stop="52852" e_length="252"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49956" stop="50055"/>
              <exon start="50165" stop="50239"/>
              <exon start="50357" stop="50398"/>
              <exon start="51228" stop="51398"/>
              <exon start="52407" stop="52493"/>
              <exon start="52601" stop="52852"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313463" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAACCCTAGAACAAAGCCTCCATTTTTGCAGAGAAAAGAGCAAGGTCTCTGAAGAAGAGTGTGAATTCAGAGCGGAGGCGCCGGAGTGTTTTGCAGAA : AAAATGGCGGACAAGGCAGTTACCATTAGAACAAGGAAGTTCATGACCAATCGTCTACTTGCAAGGAAACAATTC : ATTATCGATGTTTTGCATCCTGGAAGGGCCAACGTTTCAAAG : GCCGAGTTGAAAGAGAAATTGTCAAGGATGTACGAGGTGAAAGATCCCAATGCAATCTTTGTGTTTAAGTTCAGGACCCATTTTGGAGGAGGCAAATCTACTGGTTTTGGCTTGATCTATGATTCTGTTGAGAACGCAAAGAAATATGAGCCAAAGTACAGGCTGATCAGG : AATGGATTAGACACAAAGGTTGAGAAATCTAGGAAGCAGATGAAGGAGAGGAAGAATAGAGCCAAGAAAATACGCGGTGTCAAGAAG : ACTAAGGCAGGAGATGCCAAGAAGAAATGATCTGCTGGTGATAGTTCCTTTAAGCCAAATGCAGAAAACGTTTTCCATGTTATTTATGTTTCTCTGGCAACTCATGCAGAATCCTTTCAATTTTGGTTGAGTCACTCAAATTATATTTGCATGTTTATGTGTTAGTACTCAGAAACTTAGTGAATTTGGGAGTGTACCGTTTTTCTCAACATTCTCCTTATTTTATAATCACCATTTCAAGTGCTGCGACAA</gDNA_template>
            <first_frame> K  N  P  R  T  K  P  P  F  L  Q  R  K  E  Q  G  L  *  R  R  V  *  I  Q  S  G  G  A  G  V  F  C  R   : K  N  G  G  Q  G  S  Y  H  *  N  K  E  V  H  D  Q  S  S  T  C  K  E  T  I   : H  Y  R  C  F  A  S  W  K  G  Q  R  F  K   : G  R  V  E  R  E  I  V  K  D  V  R  G  E  R  S  Q  C  N  L  C  V  *  V  Q  D  P  F  W  R  R  Q  I  Y  W  F  W  L  D  L  *  F  C  *  E  R  K  E  I  *  A  K  V  Q  A  D  Q   : E  W  I  R  H  K  G  *  E  I  *  E  A  D  E  G  E  E  E  *  S  Q  E  N  T  R  C  Q  E   : D  *  G  R  R  C  Q  E  E  M  I  C  W  *  *  F  L  *  A  K  C  R  K  R  F  P  C  Y  L  C  F  S  G  N  S  C  R  I  L  S  I  L  V  E  S  L  K  L  Y  L  H  V  Y  V  L  V  L  R  N  L  V  N  L  G  V  Y  R  F  S  Q  H  S  P  Y  F  I  I  T  I  S  S  A  A  T  </first_frame>
            <second_frame>  K  T  L  E  Q  S  L  H  F  C  R  E  K  S  K  V  S  E  E  E  C  E  F  R  A  E  A  P  E  C  F  A  E  :  K  M  A  D  K  A  V  T  I  R  T  R  K  F  M  T  N  R  L  L  A  R  K  Q  F  :  I  I  D  V  L  H  P  G  R  A  N  V  S  K  :  A  E  L  K  E  K  L  S  R  M  Y  E  V  K  D  P  N  A  I  F  V  F  K  F  R  T  H  F  G  G  G  K  S  T  G  F  G  L  I  Y  D  S  V  E  N  A  K  K  Y  E  P  K  Y  R  L  I  R  :  N  G  L  D  T  K  V  E  K  S  R  K  Q  M  K  E  R  K  N  R  A  K  K  I  R  G  V  K  K  :  T  K  A  G  D  A  K  K  K  *  S  A  G  D  S  S  F  K  P  N  A  E  N  V  F  H  V  I  Y  V  S  L  A  T  H  A  E  S  F  Q  F  W  L  S  H  S  N  Y  I  C  M  F  M  C  *  Y  S  E  T  *  *  I  W  E  C  T  V  F  L  N  I  L  L  I  L  *  S  P  F  Q  V  L  R  Q </second_frame>
            <third_frame>   K  P  *  N  K  A  S  I  F  A  E  K  R  A  R  S  L  K  K  S  V  N  S  E  R  R  R  R  S  V  L  Q  K :   K  W  R  T  R  Q  L  P  L  E  Q  G  S  S  *  P  I  V  Y  L  Q  G  N  N  S :   L  S  M  F  C  I  L  E  G  P  T  F  Q  R :   P  S  *  K  R  N  C  Q  G  C  T  R  *  K  I  P  M  Q  S  L  C  L  S  S  G  P  I  L  E  E  A  N  L  L  V  L  A  *  S  M  I  L  L  R  T  Q  R  N  M  S  Q  S  T  G  *  S  G :   M  D  *  T  Q  R  L  R  N  L  G  S  R  *  R  R  G  R  I  E  P  R  K  Y  A  V  S  R  R :   L  R  Q  E  M  P  R  R  N  D  L  L  V  I  V  P  L  S  Q  M  Q  K  T  F  S  M  L  F  M  F  L  W  Q  L  M  Q  N  P  F  N  F  G  *  V  T  Q  I  I  F  A  C  L  C  V  S  T  Q  K  L  S  E  F  G  S  V  P  F  F  S  T  F  S  L  F  Y  N  H  H  F  K  C  C  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0021K07.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="49957" stop="50055"/>
                    <exon start="50165" stop="50239"/>
                    <exon start="50357" stop="50398"/>
                    <exon start="51228" stop="51398"/>
                    <exon start="52407" stop="52493"/>
                    <exon start="52601" stop="52630"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>501</number_coding_nucleotides>
                  <number_encoded_amino_acids>167</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KTLEQSLHFCREKSKVSEEECEFRAEAPECFAEKMADKAVTIRTRKFMTNRLLARKQFIIDVLHPGRANVSKAELKEKLSRMYEVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKAGDAKKK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0021K07.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52654" stop="52851"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AKCRKRFPCYLCFSGNSCRILSILVESLKLYLHVYVLVLRNLVNLGVYRFSQHSPYFIITISSAAT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="54582" PGL_stop="53631"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="54582" e_stop="53631"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="54582" e_stop="53631" e_length="952"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54582" stop="53631"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326849" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGGATTCCCACTACAGTTGAGTCCTATAACTCTCTCTCTCTCTGCGCACAACTATTTCGGTTCGGGTTTAATTCTTTCACCATGAAGGTTCATCCAGTAACAAGTAACGTTTTGTCTCCGGCTAACGGCTCAGTTTGCCGGAAAAAGAAGCTCCGGAGACTACCTCATATTTTTGCCAAGGTTCTAGAACTTCCTTTTCATTCCGATTCTGATGTTTCAATCCACGAAACTTCTGATTCGTTGCGATTTGTCATCCCAACAGATGATGTCGGCGATAATATTAGAGCTCACATAGTTGAGATCTATCCGGGTGTTACTAAGATTGTTATCCGAGCTGATAACGTTTTTGATTCTTCATTGGACCTCGACTTGTGGCGATTTCGGCTTCCGGCCACAACTCTGCCGGAACTGGCTAGTGCCCGTTTTAGTGACGGTGAATTGGTGGTCACGGTGCCCAAAGGGGAGGAGGAAGACGACGGCGATATCGTCCGAGCAGGTGGTTTTGTTCTCGTACAATAATCCTCTTTTGTCTCACTCGATTGTTTTTCCAAGTTTTAGTTTTTTTTTAGTTAATTGTGGCTGGTCCTGCCAATGGGATATAATTTGAATGTTTGAATTGAATGTTAGTTTCTCTTTAGATGTATATATGATCATACATAGTTTTCAATTTATGTGTTAATGTTAGTAGGCACTTTATTTTGACTTGTTGCAATTAGAAAGCAGGTTTCCAAGAAAATTTTACAACCAACAACAAATTAATGACTCTTGTTGCTTTTCAAGTAACTAACTAGTTGGCCACCCCAGAAGAAGCTTTTTGTAAAACCTTGTCTTTTAATTTATTGAGTTTATAGTTCCTCATTCTTAGTCTCTTTAGGCTGTACAATAGCTGGATTGTGTTTCCCGTTCATACATTATTGAAATAAAAAGGATACCCAGCAGCATATTTTACCA</gDNA_template>
            <first_frame> Q  D  S  H  Y  S  *  V  L  *  L  S  L  S  L  R  T  T  I  S  V  R  V  *  F  F  H  H  E  G  S  S  S  N  K  *  R  F  V  S  G  *  R  L  S  L  P  E  K  E  A  P  E  T  T  S  Y  F  C  Q  G  S  R  T  S  F  S  F  R  F  *  C  F  N  P  R  N  F  *  F  V  A  I  C  H  P  N  R  *  C  R  R  *  Y  *  S  S  H  S  *  D  L  S  G  C  Y  *  D  C  Y  P  S  *  *  R  F  *  F  F  I  G  P  R  L  V  A  I  S  A  S  G  H  N  S  A  G  T  G  *  C  P  F  *  *  R  *  I  G  G  H  G  A  Q  R  G  G  G  R  R  R  R  Y  R  P  S  R  W  F  C  S  R  T  I  I  L  F  C  L  T  R  L  F  F  Q  V  L  V  F  F  *  L  I  V  A  G  P  A  N  G  I  *  F  E  C  L  N  *  M  L  V  S  L  *  M  Y  I  *  S  Y  I  V  F  N  L  C  V  N  V  S  R  H  F  I  L  T  C  C  N  *  K  A  G  F  Q  E  N  F  T  T  N  N  K  L  M  T  L  V  A  F  Q  V  T  N  *  L  A  T  P  E  E  A  F  C  K  T  L  S  F  N  L  L  S  L  *  F  L  I  L  S  L  F  R  L  Y  N  S  W  I  V  F  P  V  H  T  L  L  K  *  K  G  Y  P  A  A  Y  F  T  </first_frame>
            <second_frame>  R  I  P  T  T  V  E  S  Y  N  S  L  S  L  C  A  Q  L  F  R  F  G  F  N  S  F  T  M  K  V  H  P  V  T  S  N  V  L  S  P  A  N  G  S  V  C  R  K  K  K  L  R  R  L  P  H  I  F  A  K  V  L  E  L  P  F  H  S  D  S  D  V  S  I  H  E  T  S  D  S  L  R  F  V  I  P  T  D  D  V  G  D  N  I  R  A  H  I  V  E  I  Y  P  G  V  T  K  I  V  I  R  A  D  N  V  F  D  S  S  L  D  L  D  L  W  R  F  R  L  P  A  T  T  L  P  E  L  A  S  A  R  F  S  D  G  E  L  V  V  T  V  P  K  G  E  E  E  D  D  G  D  I  V  R  A  G  G  F  V  L  V  Q  *  S  S  F  V  S  L  D  C  F  S  K  F  *  F  F  F  S  *  L  W  L  V  L  P  M  G  Y  N  L  N  V  *  I  E  C  *  F  L  F  R  C  I  Y  D  H  T  *  F  S  I  Y  V  L  M  L  V  G  T  L  F  *  L  V  A  I  R  K  Q  V  S  K  K  I  L  Q  P  T  T  N  *  *  L  L  L  L  F  K  *  L  T  S  W  P  P  Q  K  K  L  F  V  K  P  C  L  L  I  Y  *  V  Y  S  S  S  F  L  V  S  L  G  C  T  I  A  G  L  C  F  P  F  I  H  Y  *  N  K  K  D  T  Q  Q  H  I  L  P </second_frame>
            <third_frame>   G  F  P  L  Q  L  S  P  I  T  L  S  L  S  A  H  N  Y  F  G  S  G  L  I  L  S  P  *  R  F  I  Q  *  Q  V  T  F  C  L  R  L  T  A  Q  F  A  G  K  R  S  S  G  D  Y  L  I  F  L  P  R  F  *  N  F  L  F  I  P  I  L  M  F  Q  S  T  K  L  L  I  R  C  D  L  S  S  Q  Q  M  M  S  A  I  I  L  E  L  T  *  L  R  S  I  R  V  L  L  R  L  L  S  E  L  I  T  F  L  I  L  H  W  T  S  T  C  G  D  F  G  F  R  P  Q  L  C  R  N  W  L  V  P  V  L  V  T  V  N  W  W  S  R  C  P  K  G  R  R  K  T  T  A  I  S  S  E  Q  V  V  L  F  S  Y  N  N  P  L  L  S  H  S  I  V  F  P  S  F  S  F  F  L  V  N  C  G  W  S  C  Q  W  D  I  I  *  M  F  E  L  N  V  S  F  S  L  D  V  Y  M  I  I  H  S  F  Q  F  M  C  *  C  *  *  A  L  Y  F  D  L  L  Q  L  E  S  R  F  P  R  K  F  Y  N  Q  Q  Q  I  N  D  S  C  C  F  S  S  N  *  L  V  G  H  P  R  R  S  F  L  *  N  L  V  F  *  F  I  E  F  I  V  P  H  S  *  S  L  *  A  V  Q  *  L  D  C  V  S  R  S  Y  I  I  E  I  K  R  I  P  S  S  I  F  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0021K07.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54581" stop="54063"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>516</number_coding_nucleotides>
                  <number_encoded_amino_acids>172</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RIPTTVESYNSLSLCAQLFRFGFNSFTMKVHPVTSNVLSPANGSVCRKKKLRRLPHIFAKVLELPFHSDSDVSIHETSDSLRFVIPTDDVGDNIRAHIVEIYPGVTKIVIRADNVFDSSLDLDLWRFRLPATTLPELASARFSDGELVVTVPKGEEEDDGDIVRAGGFVLVQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="62066" PGL_stop="56202"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62066" e_stop="62037"/>
            <exon e_start="61909" e_stop="61826"/>
            <exon e_start="61652" e_stop="61533"/>
            <exon e_start="61436" e_stop="61368"/>
            <exon e_start="60827" e_stop="60750"/>
            <exon e_start="60582" e_stop="60444"/>
            <exon e_start="59819" e_stop="59655"/>
            <exon e_start="57839" e_stop="57694"/>
            <exon e_start="57546" e_stop="57367"/>
            <exon e_start="56903" e_stop="56815"/>
            <exon e_start="56673" e_stop="56642"/>
            <exon e_start="56483" e_stop="56202"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.981" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.519" acc_prob="0.598" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.876" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.799" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.948" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.794"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="62066" e_stop="62037" e_length="30"/>
          </exon>
          <intron i_serial="1" don_prob="0.981" acc_prob="0.977">
            <gDNA_intron_boundary i_start="62036" i_stop="61910" i_length="127"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="61909" e_stop="61826" e_length="84"/>
          </exon>
          <intron i_serial="2" don_prob="0.519" acc_prob="0.598">
            <gDNA_intron_boundary i_start="61825" i_stop="61653" i_length="173"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="61652" e_stop="61533" e_length="120"/>
          </exon>
          <intron i_serial="3" don_prob="0.988" acc_prob="0.876">
            <gDNA_intron_boundary i_start="61532" i_stop="61437" i_length="96"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="61436" e_stop="61368" e_length="69"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.993">
            <gDNA_intron_boundary i_start="61367" i_stop="60828" i_length="540"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="60827" e_stop="60750" e_length="78"/>
          </exon>
          <intron i_serial="5" don_prob="0.992" acc_prob="0.799">
            <gDNA_intron_boundary i_start="60749" i_stop="60583" i_length="167"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="60582" e_stop="60444" e_length="139"/>
          </exon>
          <intron i_serial="6" don_prob="0.960" acc_prob="0.990">
            <gDNA_intron_boundary i_start="60443" i_stop="59820" i_length="624"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="59819" e_stop="59655" e_length="165"/>
          </exon>
          <intron i_serial="7" don_prob="0.990" acc_prob="0.996">
            <gDNA_intron_boundary i_start="59654" i_stop="57840" i_length="1815"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="57839" e_stop="57694" e_length="146"/>
          </exon>
          <intron i_serial="8" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="57693" i_stop="57547" i_length="147"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="57546" e_stop="57367" e_length="180"/>
          </exon>
          <intron i_serial="9" don_prob="1.000" acc_prob="0.974">
            <gDNA_intron_boundary i_start="57366" i_stop="56904" i_length="463"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="56903" e_stop="56815" e_length="89"/>
          </exon>
          <intron i_serial="10" don_prob="0.985" acc_prob="0.948">
            <gDNA_intron_boundary i_start="56814" i_stop="56674" i_length="141"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="56673" e_stop="56642" e_length="32"/>
          </exon>
          <intron i_serial="11" don_prob="0.994" acc_prob="0.996">
            <gDNA_intron_boundary i_start="56641" i_stop="56484" i_length="158"/>
          </intron>
          <exon e_serial="12" e_score="0.794">
            <gDNA_exon_boundary e_start="56483" e_stop="56202" e_length="282"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62066" stop="62037"/>
              <exon start="61909" stop="61826"/>
              <exon start="61652" stop="61533"/>
              <exon start="61436" stop="61368"/>
              <exon start="60827" stop="60750"/>
              <exon start="60582" stop="60444"/>
              <exon start="59819" stop="59655"/>
              <exon start="57839" stop="57694"/>
              <exon start="57546" stop="57367"/>
              <exon start="56903" stop="56815"/>
              <exon start="56673" stop="56642"/>
              <exon start="56483" stop="56202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326644" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACAATGGCTATTGAGTTTGCGGAGTATCAG : GTCTGTGTTGACGTGTTTCTCACAACACAATCTTATGTAGACATTGCCTCCATCTCGGTCATTCCTAGGACGACTGGTGGGCAG : GTGTACTACTATTTCCCTTTCTCTGCTCTTGCTGATACTGCCAAGCTATACAATGATCTTCGATGGAATATCACTAGGCCCCAAGGGTTTGAGGCAGTAATGCGTGTAAGATGTAGTCAG : GGCCTTCAAGTTCAAGAGTATTCTGGAAATTACTGTAAAAGAATTCCTACAGATGTTGATCTACCTGCG : ATTGACTGTGACAAAACAATTATGGTTACATTGAAACATGATGACAAATTGCAGGATGGTTCAGAATGTTCTTTTCAG : TCTGCTGTTCTTTACACTACCATTGATGGCCAAAGAAGAATCCGAGTGTCAACTTTGGCTCTGCCTTGCACAACTATGTTGAGTAATCTATTTCGATCAGCTGACTTGGACACCCAGTTTGCTTGCATCTTAAAGCAAG : CTGCCAGTGAAGTACCAACTGCTCCTCTCTCACGGATAAGAGAACAAGTGACAAACCTTTGCATCAATATTCTGCACTCTTACCGTAAATTCTGTGCGACAGTGTCATCCTCAGGGCAACTTATCCTTCCTGAGGCACTTAAACTTCTTCCTCTTTACACATTGG : CTTTGGTTAAAAGCACTGGACTTAGAGCAGATGGACAGATCGATAGTAGGTCCTTCTGGATAAATTATGTTTCCCCACTCTCTACTCCATTGGCAATCCCTCTGGTCTACCCTAGATTGATAGCAATTCATGAATTTGATACTAAG : GAGAATGATGATTCTCTTATTCCCCCTTCTATTCCACTTTCCAGTGAACACATTACTGACAATGGTATCTATCTTCTCGAGAACGGTGAGGACTGTTTGATATATGTTGGGAACTCTGCAGATCCTAATGTTATCCGTCAGCTGCTAGGCATTTCATCTGTCGAGGAAATTCCTGCTCAG : TTTGTCCTGCAGCAGTATGACAATCCACTCTCTAAGAAGCTCAACGACATCATTAATGATATTAGACGCCAAAGGTGTAACTATCTCCG : CTTAAAATTATGCAAAAAGGGAGATTCATCAG : GCATGTTATTTCTCTCGCACATGGTAGAAGACAAGACACAAAATGGGCTTTCATATGTCGAGTTTCTAGTACATATCCATCGACATATTCAAAATAAAATGGCTTGAGAAAATATCCAGTTTTGTTCATGAATTTTGATTATAGAGAAGGGGGGGGGGGGGTACAGATGTTTTCAGTATGAAGAGATGCAGATGAGCTTTCCAGGTGTGGCCCCATCCATGGCTTCAGAGCTATCTTAGTTTTTTTGAGGTGCAGCGCATACTCAAAATGAACGGACAAAAA</gDNA_template>
            <first_frame> T  M  A  I  E  F  A  E  Y  Q  :  V  C  V  D  V  F  L  T  T  Q  S  Y  V  D  I  A  S  I  S  V  I  P  R  T  T  G  G  Q  :  V  Y  Y  Y  F  P  F  S  A  L  A  D  T  A  K  L  Y  N  D  L  R  W  N  I  T  R  P  Q  G  F  E  A  V  M  R  V  R  C  S  Q  :  G  L  Q  V  Q  E  Y  S  G  N  Y  C  K  R  I  P  T  D  V  D  L  P  A  :  I  D  C  D  K  T  I  M  V  T  L  K  H  D  D  K  L  Q  D  G  S  E  C  S  F  Q  :  S  A  V  L  Y  T  T  I  D  G  Q  R  R  I  R  V  S  T  L  A  L  P  C  T  T  M  L  S  N  L  F  R  S  A  D  L  D  T  Q  F  A  C  I  L  K  Q   : A  A  S  E  V  P  T  A  P  L  S  R  I  R  E  Q  V  T  N  L  C  I  N  I  L  H  S  Y  R  K  F  C  A  T  V  S  S  S  G  Q  L  I  L  P  E  A  L  K  L  L  P  L  Y  T  L   : A  L  V  K  S  T  G  L  R  A  D  G  Q  I  D  S  R  S  F  W  I  N  Y  V  S  P  L  S  T  P  L  A  I  P  L  V  Y  P  R  L  I  A  I  H  E  F  D  T  K  :  E  N  D  D  S  L  I  P  P  S  I  P  L  S  S  E  H  I  T  D  N  G  I  Y  L  L  E  N  G  E  D  C  L  I  Y  V  G  N  S  A  D  P  N  V  I  R  Q  L  L  G  I  S  S  V  E  E  I  P  A  Q  :  F  V  L  Q  Q  Y  D  N  P  L  S  K  K  L  N  D  I  I  N  D  I  R  R  Q  R  C  N  Y  L  R :   L  K  L  C  K  K  G  D  S  S   : G  M  L  F  L  S  H  M  V  E  D  K  T  Q  N  G  L  S  Y  V  E  F  L  V  H  I  H  R  H  I  Q  N  K  M  A  *  E  N  I  Q  F  C  S  *  I  L  I  I  E  K  G  G  G  G  Y  R  C  F  Q  Y  E  E  M  Q  M  S  F  P  G  V  A  P  S  M  A  S  E  L  S  *  F  F  *  G  A  A  H  T  Q  N  E  R  T  K  </first_frame>
            <second_frame>  Q  W  L  L  S  L  R  S  I  R :   S  V  L  T  C  F  S  Q  H  N  L  M  *  T  L  P  P  S  R  S  F  L  G  R  L  V  G  R :   C  T  T  I  S  L  S  L  L  L  L  I  L  P  S  Y  T  M  I  F  D  G  I  S  L  G  P  K  G  L  R  Q  *  C  V  *  D  V  V  R :   A  F  K  F  K  S  I  L  E  I  T  V  K  E  F  L  Q  M  L  I  Y  L  R :   L  T  V  T  K  Q  L  W  L  H  *  N  M  M  T  N  C  R  M  V  Q  N  V  L  F  S :   L  L  F  F  T  L  P  L  M  A  K  E  E  S  E  C  Q  L  W  L  C  L  A  Q  L  C  *  V  I  Y  F  D  Q  L  T  W  T  P  S  L  L  A  S  *  S  K  :  L  P  V  K  Y  Q  L  L  L  S  H  G  *  E  N  K  *  Q  T  F  A  S  I  F  C  T  L  T  V  N  S  V  R  Q  C  H  P  Q  G  N  L  S  F  L  R  H  L  N  F  F  L  F  T  H  W  :  L  W  L  K  A  L  D  L  E  Q  M  D  R  S  I  V  G  P  S  G  *  I  M  F  P  H  S  L  L  H  W  Q  S  L  W  S  T  L  D  *  *  Q  F  M  N  L  I  L  R :   R  M  M  I  L  L  F  P  L  L  F  H  F  P  V  N  T  L  L  T  M  V  S  I  F  S  R  T  V  R  T  V  *  Y  M  L  G  T  L  Q  I  L  M  L  S  V  S  C  *  A  F  H  L  S  R  K  F  L  L  S :   L  S  C  S  S  M  T  I  H  S  L  R  S  S  T  T  S  L  M  I  L  D  A  K  G  V  T  I  S   : A  *  N  Y  A  K  R  E  I  H  Q  :  A  C  Y  F  S  R  T  W  *  K  T  R  H  K  M  G  F  H  M  S  S  F  *  Y  I  S  I  D  I  F  K  I  K  W  L  E  K  I  S  S  F  V  H  E  F  *  L  *  R  R  G  G  G  G  T  D  V  F  S  M  K  R  C  R  *  A  F  Q  V  W  P  H  P  W  L  Q  S  Y  L  S  F  F  E  V  Q  R  I  L  K  M  N  G  Q  K </second_frame>
            <third_frame>   N  G  Y  *  V  C  G  V  S   : G  L  C  *  R  V  S  H  N  T  I  L  C  R  H  C  L  H  L  G  H  S  *  D  D  W  W  A   : G  V  L  L  F  P  F  L  C  S  C  *  Y  C  Q  A  I  Q  *  S  S  M  E  Y  H  *  A  P  R  V  *  G  S  N  A  C  K  M  *  S   : G  P  S  S  S  R  V  F  W  K  L  L  *  K  N  S  Y  R  C  *  S  T  C   : D  *  L  *  Q  N  N  Y  G  Y  I  E  T  *  *  Q  I  A  G  W  F  R  M  F  F  S   : V  C  C  S  L  H  Y  H  *  W  P  K  K  N  P  S  V  N  F  G  S  A  L  H  N  Y  V  E  *  S  I  S  I  S  *  L  G  H  P  V  C  L  H  L  K  A  S :   C  Q  *  S  T  N  C  S  S  L  T  D  K  R  T  S  D  K  P  L  H  Q  Y  S  A  L  L  P  *  I  L  C  D  S  V  I  L  R  A  T  Y  P  S  *  G  T  *  T  S  S  S  L  H  I  G :   F  G  *  K  H  W  T  *  S  R  W  T  D  R  *  *  V  L  L  D  K  L  C  F  P  T  L  Y  S  I  G  N  P  S  G  L  P  *  I  D  S  N  S  *  I  *  Y  *   : G  E  *  *  F  S  Y  S  P  F  Y  S  T  F  Q  *  T  H  Y  *  Q  W  Y  L  S  S  R  E  R  *  G  L  F  D  I  C  W  E  L  C  R  S  *  C  Y  P  S  A  A  R  H  F  I  C  R  G  N  S  C  S   : V  C  P  A  A  V  *  Q  S  T  L  *  E  A  Q  R  H  H  *  *  Y  *  T  P  K  V  *  L  S  P  :  L  K  I  M  Q  K  G  R  F  I  R :   H  V  I  S  L  A  H  G  R  R  Q  D  T  K  W  A  F  I  C  R  V  S  S  T  Y  P  S  T  Y  S  K  *  N  G  L  R  K  Y  P  V  L  F  M  N  F  D  Y  R  E  G  G  G  G  V  Q  M  F  S  V  *  R  D  A  D  E  L  S  R  C  G  P  I  H  G  F  R  A  I  L  V  F  L  R  C  S  A  Y  S  K  *  T  D  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0021K07.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62066" stop="62037"/>
                    <exon start="61909" stop="61826"/>
                    <exon start="61652" stop="61533"/>
                    <exon start="61436" stop="61368"/>
                    <exon start="60827" stop="60750"/>
                    <exon start="60582" stop="60444"/>
                    <exon start="59819" stop="59655"/>
                    <exon start="57839" stop="57694"/>
                    <exon start="57546" stop="57367"/>
                    <exon start="56903" stop="56815"/>
                    <exon start="56673" stop="56642"/>
                    <exon start="56483" stop="56377"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1236</number_coding_nucleotides>
                  <number_encoded_amino_acids>412</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TMAIEFAEYQVCVDVFLTTQSYVDIASISVIPRTTGGQVYYYFPFSALADTAKLYNDLRWNITRPQGFEAVMRVRCSQGLQVQEYSGNYCKRIPTDVDLPAIDCDKTIMVTLKHDDKLQDGSECSFQSAVLYTTIDGQRRIRVSTLALPCTTMLSNLFRSADLDTQFACILKQAASEVPTAPLSRIREQVTNLCINILHSYRKFCATVSSSGQLILPEALKLLPLYTLALVKSTGLRADGQIDSRSFWINYVSPLSTPLAIPLVYPRLIAIHEFDTKENDDSLIPPSIPLSSEHITDNGIYLLENGEDCLIYVGNSADPNVIRQLLGISSVEEIPAQFVLQQYDNPLSKKLNDIINDIRRQRCNYLRLKLCKKGDSSGMLFLSHMVEDKTQNGLSYVEFLVHIHRHIQNKMA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="67078" PGL_stop="62915"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67078" e_stop="67052"/>
            <exon e_start="66741" e_stop="66622"/>
            <exon e_start="65428" e_stop="65348"/>
            <exon e_start="64584" e_stop="64507"/>
            <exon e_start="64397" e_stop="64305"/>
            <exon e_start="63596" e_stop="63542"/>
            <exon e_start="62989" e_stop="62915"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.489" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.921" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.679" acc_prob="0.940" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="67078" e_stop="67052" e_length="27"/>
          </exon>
          <intron i_serial="1" don_prob="0.489" acc_prob="0.999">
            <gDNA_intron_boundary i_start="67051" i_stop="66742" i_length="310"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="66741" e_stop="66622" e_length="120"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.999">
            <gDNA_intron_boundary i_start="66621" i_stop="65429" i_length="1193"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="65428" e_stop="65348" e_length="81"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.921">
            <gDNA_intron_boundary i_start="65347" i_stop="64585" i_length="763"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="64584" e_stop="64507" e_length="78"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.997">
            <gDNA_intron_boundary i_start="64506" i_stop="64398" i_length="109"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="64397" e_stop="64305" e_length="93"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="64304" i_stop="63597" i_length="708"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="63596" e_stop="63542" e_length="55"/>
          </exon>
          <intron i_serial="6" don_prob="0.679" acc_prob="0.940">
            <gDNA_intron_boundary i_start="63541" i_stop="62990" i_length="552"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="62989" e_stop="62915" e_length="75"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67078" stop="67052"/>
              <exon start="66741" stop="66622"/>
              <exon start="65428" stop="65348"/>
              <exon start="64584" stop="64507"/>
              <exon start="64397" stop="64305"/>
              <exon start="63596" stop="63542"/>
              <exon start="62989" stop="62915"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U344481" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAGTTTGTCGCTACCAAGGAGTATATG : GTGCGAGATCCAATGCCTGCTGTGTATTTCTTCCTGATAGACGTTTCCATGAATGCCATACAGACTGGTGCAACTGCAGCTGCTTGCAGTGCAATCAGCCAAGTTATTTCTGATCTCCCT : GACGGTCCTCGGACATTGGTCGGAGTTGCTACATTTGACTCAACTATCCACTTCTACAATCTCAAGCGTGCATTGCAGCAG : CCATTGATGCTTATAGTCCCTGATGTCCAAGATGTTTACACCCCCCTACAGACTGATGTTATCGTGCAGCTCTCGGAG : TGCCGTCAACACCTAGAGCTTCTTCTAGAAAGCATCCCAACAATGTTCCAGAACAACAGGATTGCTGATTCAGCTTTTGGAGCTGCAGTCAAG : GCTGCTTTCTTGGCAATGAAAAGCACTGGAGGCAAACTTCTTGTGTTTCAATCAG : TCCTGCCATCTACTGGTATTGGGGCCCTTTCTGCAAGAGAGGCTGAAGGAAGAACCAATGTATCAGCTGCAGAAA</gDNA_template>
            <first_frame> E  F  V  A  T  K  E  Y  M  :  V  R  D  P  M  P  A  V  Y  F  F  L  I  D  V  S  M  N  A  I  Q  T  G  A  T  A  A  A  C  S  A  I  S  Q  V  I  S  D  L  P  :  D  G  P  R  T  L  V  G  V  A  T  F  D  S  T  I  H  F  Y  N  L  K  R  A  L  Q  Q  :  P  L  M  L  I  V  P  D  V  Q  D  V  Y  T  P  L  Q  T  D  V  I  V  Q  L  S  E  :  C  R  Q  H  L  E  L  L  L  E  S  I  P  T  M  F  Q  N  N  R  I  A  D  S  A  F  G  A  A  V  K  :  A  A  F  L  A  M  K  S  T  G  G  K  L  L  V  F  Q  S   : V  L  P  S  T  G  I  G  A  L  S  A  R  E  A  E  G  R  T  N  V  S  A  A  E  </first_frame>
            <second_frame>  S  L  S  L  P  R  S  I  W :   C  E  I  Q  C  L  L  C  I  S  S  *  *  T  F  P  *  M  P  Y  R  L  V  Q  L  Q  L  L  A  V  Q  S  A  K  L  F  L  I  S  L :   T  V  L  G  H  W  S  E  L  L  H  L  T  Q  L  S  T  S  T  I  S  S  V  H  C  S  S :   H  *  C  L  *  S  L  M  S  K  M  F  T  P  P  Y  R  L  M  L  S  C  S  S  R  S :   A  V  N  T  *  S  F  F  *  K  A  S  Q  Q  C  S  R  T  T  G  L  L  I  Q  L  L  E  L  Q  S  R :   L  L  S  W  Q  *  K  A  L  E  A  N  F  L  C  F  N  Q  :  S  C  H  L  L  V  L  G  P  F  L  Q  E  R  L  K  E  E  P  M  Y  Q  L  Q  K </second_frame>
            <third_frame>   V  C  R  Y  Q  G  V  Y   : G  A  R  S  N  A  C  C  V  F  L  P  D  R  R  F  H  E  C  H  T  D  W  C  N  C  S  C  L  Q  C  N  Q  P  S  Y  F  *  S  P   : *  R  S  S  D  I  G  R  S  C  Y  I  *  L  N  Y  P  L  L  Q  S  Q  A  C  I  A  A   : A  I  D  A  Y  S  P  *  C  P  R  C  L  H  P  P  T  D  *  C  Y  R  A  A  L  G   : V  P  S  T  P  R  A  S  S  R  K  H  P  N  N  V  P  E  Q  Q  D  C  *  F  S  F  W  S  C  S  Q   : G  C  F  L  G  N  E  K  H  W  R  Q  T  S  C  V  S  I  S :   P  A  I  Y  W  Y  W  G  P  F  C  K  R  G  *  R  K  N  Q  C  I  S  C  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0021K07.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67078" stop="67052"/>
                    <exon start="66741" stop="66622"/>
                    <exon start="65428" stop="65348"/>
                    <exon start="64584" stop="64507"/>
                    <exon start="64397" stop="64305"/>
                    <exon start="63596" stop="63542"/>
                    <exon start="62989" stop="62916"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>528</number_coding_nucleotides>
                  <number_encoded_amino_acids>176</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EFVATKEYMVRDPMPAVYFFLIDVSMNAIQTGATAAACSAISQVISDLPDGPRTLVGVATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPLQTDVIVQLSECRQHLELLLESIPTMFQNNRIADSAFGAAVKAAFLAMKSTGGKLLVFQSVLPSTGIGALSAREAEGRTNVSAAE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="78025" PGL_stop="79058"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="78025" e_stop="78154"/>
            <exon e_start="78393" e_stop="79058"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="78025" e_stop="78154" e_length="130"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.996">
            <gDNA_intron_boundary i_start="78155" i_stop="78392" i_length="238"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="78393" e_stop="79058" e_length="666"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78025" stop="78154"/>
              <exon start="78393" stop="79058"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U325207" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACCATAAAAACCAAGTACAGTAATATCTACTGCGCATTTCGTTTCTTTGCTTATTAGAATAAGGAGAAAAATCTCATCATAAATCACCCTTTTCAGCACTCTGCTTCAGTATATACTTTCTGACATCAG : AAACTGAAGGGTGGAGTGGTGATTGTGGATATATTTTTCATAGACGTGCGTGTTGAAGAATAGTTTGGATTCAGTGATAGTTATTTTGATTTCCTGGTAACCTATTGTTTGAGAAAATTTTTAGGATCTACAGTCATTCAGCAGTATGGATCTTTGAACACTGTTGTTTCTGCTTAGATTTTCAGGCTTGTCGATCAGATAGTGAGTTATAGTGGAATTTGATCGAATCGGTTATTGGCTCTGTTGAAAATGATTGTTGTTCCTCAGCATCGGGATCAAAACTATTTGGAAAGTAGGGCACATGGCCCTACTCGATTTGGGTCATTTGGTTCACCTCCCTCTGGTGGGTTCATGGAGGTAAATTGTCGGGCTTTTGAGTCCAGGGCAGGTTTATATCATACCAAATCGAAGTCTTGCAAGAAACCTGTCATCAAACGGGCCCTCACGGGTTCCTTATCTCCCAAAACGCGACCACCTTTAACATCACTGCCTGTTAATACTGTCAAGTCTCATTCTGAAGATCAAAAGAAATCAGGAAAAACAGCCCAAAATTTCATGGTTTCGATACCATTTAACCTCAAAGTGGATGTAGGTTCTAGGAATGAGGGTTCCTTGAATGATGAGTTACCGTTTTCTGAACTATGGGCTGGGCCAGCGTATTCAAAT</gDNA_template>
            <first_frame> N  H  K  N  Q  V  Q  *  Y  L  L  R  I  S  F  L  C  L  L  E  *  G  E  K  S  H  H  K  S  P  F  S  A  L  C  F  S  I  Y  F  L  T  S   : E  T  E  G  W  S  G  D  C  G  Y  I  F  H  R  R  A  C  *  R  I  V  W  I  Q  *  *  L  F  *  F  P  G  N  L  L  F  E  K  I  F  R  I  Y  S  H  S  A  V  W  I  F  E  H  C  C  F  C  L  D  F  Q  A  C  R  S  D  S  E  L  *  W  N  L  I  E  S  V  I  G  S  V  E  N  D  C  C  S  S  A  S  G  S  K  L  F  G  K  *  G  T  W  P  Y  S  I  W  V  I  W  F  T  S  L  W  W  V  H  G  G  K  L  S  G  F  *  V  Q  G  R  F  I  S  Y  Q  I  E  V  L  Q  E  T  C  H  Q  T  G  P  H  G  F  L  I  S  Q  N  A  T  T  F  N  I  T  A  C  *  Y  C  Q  V  S  F  *  R  S  K  E  I  R  K  N  S  P  K  F  H  G  F  D  T  I  *  P  Q  S  G  C  R  F  *  E  *  G  F  L  E  *  *  V  T  V  F  *  T  M  G  W  A  S  V  F  K  </first_frame>
            <second_frame>  T  I  K  T  K  Y  S  N  I  Y  C  A  F  R  F  F  A  Y  *  N  K  E  K  N  L  I  I  N  H  P  F  Q  H  S  A  S  V  Y  T  F  *  H  Q  :  K  L  K  G  G  V  V  I  V  D  I  F  F  I  D  V  R  V  E  E  *  F  G  F  S  D  S  Y  F  D  F  L  V  T  Y  C  L  R  K  F  L  G  S  T  V  I  Q  Q  Y  G  S  L  N  T  V  V  S  A  *  I  F  R  L  V  D  Q  I  V  S  Y  S  G  I  *  S  N  R  L  L  A  L  L  K  M  I  V  V  P  Q  H  R  D  Q  N  Y  L  E  S  R  A  H  G  P  T  R  F  G  S  F  G  S  P  P  S  G  G  F  M  E  V  N  C  R  A  F  E  S  R  A  G  L  Y  H  T  K  S  K  S  C  K  K  P  V  I  K  R  A  L  T  G  S  L  S  P  K  T  R  P  P  L  T  S  L  P  V  N  T  V  K  S  H  S  E  D  Q  K  K  S  G  K  T  A  Q  N  F  M  V  S  I  P  F  N  L  K  V  D  V  G  S  R  N  E  G  S  L  N  D  E  L  P  F  S  E  L  W  A  G  P  A  Y  S  N </second_frame>
            <third_frame>   P  *  K  P  S  T  V  I  S  T  A  H  F  V  S  L  L  I  R  I  R  R  K  I  S  S  *  I  T  L  F  S  T  L  L  Q  Y  I  L  S  D  I  R :   N  *  R  V  E  W  *  L  W  I  Y  F  S  *  T  C  V  L  K  N  S  L  D  S  V  I  V  I  L  I  S  W  *  P  I  V  *  E  N  F  *  D  L  Q  S  F  S  S  M  D  L  *  T  L  L  F  L  L  R  F  S  G  L  S  I  R  *  *  V  I  V  E  F  D  R  I  G  Y  W  L  C  *  K  *  L  L  F  L  S  I  G  I  K  T  I  W  K  V  G  H  M  A  L  L  D  L  G  H  L  V  H  L  P  L  V  G  S  W  R  *  I  V  G  L  L  S  P  G  Q  V  Y  I  I  P  N  R  S  L  A  R  N  L  S  S  N  G  P  S  R  V  P  Y  L  P  K  R  D  H  L  *  H  H  C  L  L  I  L  S  S  L  I  L  K  I  K  R  N  Q  E  K  Q  P  K  I  S  W  F  R  Y  H  L  T  S  K  W  M  *  V  L  G  M  R  V  P  *  M  M  S  Y  R  F  L  N  Y  G  L  G  Q  R  I  Q   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0021K07.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="78615" stop="79058"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>444</number_coding_nucleotides>
                  <number_encoded_amino_acids>148</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SNRLLALLKMIVVPQHRDQNYLESRAHGPTRFGSFGSPPSGGFMEVNCRAFESRAGLYHTKSKSCKKPVIKRALTGSLSPKTRPPLTSLPVNTVKSHSEDQKKSGKTAQNFMVSIPFNLKVDVGSRNEGSLNDELPFSELWAGPAYSN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="79092" PGL_stop="81375"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="79092" e_stop="80322"/>
            <exon e_start="80444" e_stop="80697"/>
            <exon e_start="81350" e_stop="81375"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.415" e_score="0.992"/>
          <exon-only e_score="0.500"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="79092" e_stop="80322" e_length="1231"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="80323" i_stop="80443" i_length="121"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="80444" e_stop="80697" e_length="254"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.415">
            <gDNA_intron_boundary i_start="80698" i_stop="81349" i_length="652"/>
          </intron>
          <exon e_serial="3" e_score="0.500">
            <gDNA_exon_boundary e_start="81350" e_stop="81375" e_length="26"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79092" stop="80322"/>
              <exon start="80444" stop="80697"/>
              <exon start="81350" stop="81375"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U321422" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTTTCTCAGGCCTAAAAGGAATGCCTCTCTTGAGTTTCCTACTTCAGCATGTGATATTCATTTACGTCCCATTGCCAAGTCTGCACCAGCATCTCCAACCAGGGAGAGCAGTCTTTCTCCGGGAATTGTGTTTGACAATACTGACTCAGTGACACAGACTCTTCGTCGCATGCTCAACCTTGAAACTAATGCCCAAATTCTCCTTGAAACTAATGATGGATGAATGTGTGGTGGGAGTTCTGAATAGCAGTTAACTAGGGTATTATTTAGTTTTCGTATTGGGTAATAGTAGATAGTTCGTATGGTGAATAATTCAGTTTTTAGTTAGTAAGTTACTGTTTCGCTTAGTGTTTGTCATGGTAGATCAGTAGTGAAGTTGCAACATCTGTCAAGATTGGTTATTTTAAGGGGAATTCAATATGAACAATGGCTAGTTGATCGATACTCTCCTGGTATATTCAAAGTTCGTGCAGTCATGGTTAGACTATGAGGGGTTCAACAAATGGAGTATGTTTGTGCATCGAACAGTGGAAGAAGAATCTGAGTGATGAGTGAGATGCTCCTATTACATTACAGTAATAGATAGCTTGTAGTTCTTTGTAGAGGTTGCGTAACTTGTTGCTCAACTATCTTTGCTGCCCTGGAGATGAATTTGTTATAACCATCAATTGTCATTCTTGATTCCAGTGTCGTGGGATTGTTTATTGCCTCTTCATGTTCTTTTGATGTTCTGTAAATCGGAGATATTGTATATATCTTAGACCCTACCAGATTAGCATCCCTTTAGACTTCTGGTTTATTCAGTTACTAGATCTTAGCCTTTTCATCCAATTCTGCATCCTAACCATCTCTATTTCTTAGTAGATTCAAATTCTTGACTAGGAAATAGGACATTTGGTATATCTAAGTCCTTGCTATTCCTTGAATGCCTGAATGGGCTGGTCATCATCATAACTTTGTATGTATTCTCTTCTCAACTCTGAATAGGATATATGTCCTACTTCTTCCTCTTGAAGTTGTTTCCCCTTGACCAATTTTCTGTTTTTTGGGAATGAAAATTGGGTAGGGAAATTATTAGTCAGTTGTATCCTTTTCTGTTCCTGGTATTCGTATCTTCCCTTTTAGCTTTCCTTTTGCCAGTCCAATTATGCTAGTTAAGAGGTTTATTCCTTCACCAAAAAGAAAATCATCTTGCCTAAGGAGATTGGTGATCACTAGCTACTGATAAG : CGCTTTTAGTTGGAGCTGTTGGAAGAAGATTGTTGAGCGGTTGTTCTCCCTACTCTCTACTCTCGCCATGGTAGCACTACTCGTTATATGTCATTTCAGTGTCTCTATAAGATGTTGTCTGTAGGTCATTCGACCAAACTGGTAGTTACTACTGCAGTAATTATCTAGTTATGTCATGTTTTAGGTTTTGGAGTTTTACTTTTGTTGTTGAACTTGTTGATTTTAAGGTGGCATTTTGATTACGACTTCAATTA : AATTAACACAACCACCTGATTGTCGA</gDNA_template>
            <first_frame> F  F  L  R  P  K  R  N  A  S  L  E  F  P  T  S  A  C  D  I  H  L  R  P  I  A  K  S  A  P  A  S  P  T  R  E  S  S  L  S  P  G  I  V  F  D  N  T  D  S  V  T  Q  T  L  R  R  M  L  N  L  E  T  N  A  Q  I  L  L  E  T  N  D  G  *  M  C  G  G  S  S  E  *  Q  L  T  R  V  L  F  S  F  R  I  G  *  *  *  I  V  R  M  V  N  N  S  V  F  S  *  *  V  T  V  S  L  S  V  C  H  G  R  S  V  V  K  L  Q  H  L  S  R  L  V  I  L  R  G  I  Q  Y  E  Q  W  L  V  D  R  Y  S  P  G  I  F  K  V  R  A  V  M  V  R  L  *  G  V  Q  Q  M  E  Y  V  C  A  S  N  S  G  R  R  I  *  V  M  S  E  M  L  L  L  H  Y  S  N  R  *  L  V  V  L  C  R  G  C  V  T  C  C  S  T  I  F  A  A  L  E  M  N  L  L  *  P  S  I  V  I  L  D  S  S  V  V  G  L  F  I  A  S  S  C  S  F  D  V  L  *  I  G  D  I  V  Y  I  L  D  P  T  R  L  A  S  L  *  T  S  G  L  F  S  Y  *  I  L  A  F  S  S  N  S  A  S  *  P  S  L  F  L  S  R  F  K  F  L  T  R  K  *  D  I  W  Y  I  *  V  L  A  I  P  *  M  P  E  W  A  G  H  H  H  N  F  V  C  I  L  F  S  T  L  N  R  I  Y  V  L  L  L  P  L  E  V  V  S  P  *  P  I  F  C  F  L  G  M  K  I  G  *  G  N  Y  *  S  V  V  S  F  S  V  P  G  I  R  I  F  P  F  S  F  P  F  A  S  P  I  M  L  V  K  R  F  I  P  S  P  K  R  K  S  S  C  L  R  R  L  V  I  T  S  Y  *  *   : A  L  L  V  G  A  V  G  R  R  L  L  S  G  C  S  P  Y  S  L  L  S  P  W  *  H  Y  S  L  Y  V  I  S  V  S  L  *  D  V  V  C  R  S  F  D  Q  T  G  S  Y  Y  C  S  N  Y  L  V  M  S  C  F  R  F  W  S  F  T  F  V  V  E  L  V  D  F  K  V  A  F  *  L  R  L  Q  L  :  N  *  H  N  H  L  I  V   </first_frame>
            <second_frame>  F  F  S  G  L  K  G  M  P  L  L  S  F  L  L  Q  H  V  I  F  I  Y  V  P  L  P  S  L  H  Q  H  L  Q  P  G  R  A  V  F  L  R  E  L  C  L  T  I  L  T  Q  *  H  R  L  F  V  A  C  S  T  L  K  L  M  P  K  F  S  L  K  L  M  M  D  E  C  V  V  G  V  L  N  S  S  *  L  G  Y  Y  L  V  F  V  L  G  N  S  R  *  F  V  W  *  I  I  Q  F  L  V  S  K  L  L  F  R  L  V  F  V  M  V  D  Q  *  *  S  C  N  I  C  Q  D  W  L  F  *  G  E  F  N  M  N  N  G  *  L  I  D  T  L  L  V  Y  S  K  F  V  Q  S  W  L  D  Y  E  G  F  N  K  W  S  M  F  V  H  R  T  V  E  E  E  S  E  *  *  V  R  C  S  Y  Y  I  T  V  I  D  S  L  *  F  F  V  E  V  A  *  L  V  A  Q  L  S  L  L  P  W  R  *  I  C  Y  N  H  Q  L  S  F  L  I  P  V  S  W  D  C  L  L  P  L  H  V  L  L  M  F  C  K  S  E  I  L  Y  I  S  *  T  L  P  D  *  H  P  F  R  L  L  V  Y  S  V  T  R  S  *  P  F  H  P  I  L  H  P  N  H  L  Y  F  L  V  D  S  N  S  *  L  G  N  R  T  F  G  I  S  K  S  L  L  F  L  E  C  L  N  G  L  V  I  I  I  T  L  Y  V  F  S  S  Q  L  *  I  G  Y  M  S  Y  F  F  L  L  K  L  F  P  L  D  Q  F  S  V  F  W  E  *  K  L  G  R  E  I  I  S  Q  L  Y  P  F  L  F  L  V  F  V  S  S  L  L  A  F  L  L  P  V  Q  L  C  *  L  R  G  L  F  L  H  Q  K  E  N  H  L  A  *  G  D  W  *  S  L  A  T  D  K  :  R  F  *  L  E  L  L  E  E  D  C  *  A  V  V  L  P  T  L  Y  S  R  H  G  S  T  T  R  Y  M  S  F  Q  C  L  Y  K  M  L  S  V  G  H  S  T  K  L  V  V  T  T  A  V  I  I  *  L  C  H  V  L  G  F  G  V  L  L  L  L  L  N  L  L  I  L  R  W  H  F  D  Y  D  F  N  * :   I  N  T  T  T  *  L  S  </second_frame>
            <third_frame>   F  S  Q  A  *  K  E  C  L  S  *  V  S  Y  F  S  M  *  Y  S  F  T  S  H  C  Q  V  C  T  S  I  S  N  Q  G  E  Q  S  F  S  G  N  C  V  *  Q  Y  *  L  S  D  T  D  S  S  S  H  A  Q  P  *  N  *  C  P  N  S  P  *  N  *  *  W  M  N  V  W  W  E  F  *  I  A  V  N  *  G  I  I  *  F  S  Y  W  V  I  V  D  S  S  Y  G  E  *  F  S  F  *  L  V  S  Y  C  F  A  *  C  L  S  W  *  I  S  S  E  V  A  T  S  V  K  I  G  Y  F  K  G  N  S  I  *  T  M  A  S  *  S  I  L  S  W  Y  I  Q  S  S  C  S  H  G  *  T  M  R  G  S  T  N  G  V  C  L  C  I  E  Q  W  K  K  N  L  S  D  E  *  D  A  P  I  T  L  Q  *  *  I  A  C  S  S  L  *  R  L  R  N  L  L  L  N  Y  L  C  C  P  G  D  E  F  V  I  T  I  N  C  H  S  *  F  Q  C  R  G  I  V  Y  C  L  F  M  F  F  *  C  S  V  N  R  R  Y  C  I  Y  L  R  P  Y  Q  I  S  I  P  L  D  F  W  F  I  Q  L  L  D  L  S  L  F  I  Q  F  C  I  L  T  I  S  I  S  *  *  I  Q  I  L  D  *  E  I  G  H  L  V  Y  L  S  P  C  Y  S  L  N  A  *  M  G  W  S  S  S  *  L  C  M  Y  S  L  L  N  S  E  *  D  I  C  P  T  S  S  S  *  S  C  F  P  L  T  N  F  L  F  F  G  N  E  N  W  V  G  K  L  L  V  S  C  I  L  F  C  S  W  Y  S  Y  L  P  F  *  L  S  F  C  Q  S  N  Y  A  S  *  E  V  Y  S  F  T  K  K  K  I  I  L  P  K  E  I  G  D  H  *  L  L  I  S :   A  F  S  W  S  C  W  K  K  I  V  E  R  L  F  S  L  L  S  T  L  A  M  V  A  L  L  V  I  C  H  F  S  V  S  I  R  C  C  L  *  V  I  R  P  N  W  *  L  L  L  Q  *  L  S  S  Y  V  M  F  *  V  L  E  F  Y  F  C  C  *  T  C  *  F  *  G  G  I  L  I  T  T  S  I   : K  L  T  Q  P  P  D  C  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0021K07.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79092" stop="79316"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFLRPKRNASLEFPTSACDIHLRPIAKSAPASPTRESSLSPGIVFDNTDSVTQTLRRMLNLETNAQILLETNDG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="85291" PGL_stop="84221"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85291" e_stop="85132"/>
            <exon e_start="84410" e_stop="84221"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.990" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="85291" e_stop="85132" e_length="160"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.990">
            <gDNA_intron_boundary i_start="85131" i_stop="84411" i_length="721"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="84410" e_stop="84221" e_length="190"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85291" stop="85132"/>
              <exon start="84410" stop="84221"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U346262" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCATCCAAATTATATATTTGGTGTGACCAAAAAACATAAACAAGTACTCTTGTAGATTTATCTGTCCTCTTAAAAACTGCTTTTTTTGTTTTGTTTTCAGAAAGAAATTATATGGCAAATATTTCTACTTGCTCCCTTCTCGTTGCTGCTGTTTTTCTAG : TTGGAATATTGATGATCCCATCGGAAATATTGGGAGAAACATGCTATCAAATACACCCAGAGATATTGTGTGATGAAGGCAAAGTTGAAGGGGAATGTTTACCTTTCTGCAATGACAAATTTGGATCCTCTGCTGGTGGACAATGCATTGAGCAAATTGGCTTTGATGGTCCTTTTTGTGCATGTGATTA</gDNA_template>
            <first_frame> S  S  K  L  Y  I  W  C  D  Q  K  T  *  T  S  T  L  V  D  L  S  V  L  L  K  T  A  F  F  V  L  F  S  E  R  N  Y  M  A  N  I  S  T  C  S  L  L  V  A  A  V  F  L   : V  G  I  L  M  I  P  S  E  I  L  G  E  T  C  Y  Q  I  H  P  E  I  L  C  D  E  G  K  V  E  G  E  C  L  P  F  C  N  D  K  F  G  S  S  A  G  G  Q  C  I  E  Q  I  G  F  D  G  P  F  C  A  C  D   </first_frame>
            <second_frame>  H  P  N  Y  I  F  G  V  T  K  K  H  K  Q  V  L  L  *  I  Y  L  S  S  *  K  L  L  F  L  F  C  F  Q  K  E  I  I  W  Q  I  F  L  L  A  P  F  S  L  L  L  F  F  *  :  L  E  Y  *  *  S  H  R  K  Y  W  E  K  H  A  I  K  Y  T  Q  R  Y  C  V  M  K  A  K  L  K  G  N  V  Y  L  S  A  M  T  N  L  D  P  L  L  V  D  N  A  L  S  K  L  A  L  M  V  L  F  V  H  V  I  </second_frame>
            <third_frame>   I  Q  I  I  Y  L  V  *  P  K  N  I  N  K  Y  S  C  R  F  I  C  P  L  K  N  C  F  F  C  F  V  F  R  K  K  L  Y  G  K  Y  F  Y  L  L  P  S  R  C  C  C  F  S  S :   W  N  I  D  D  P  I  G  N  I  G  R  N  M  L  S  N  T  P  R  D  I  V  *  *  R  Q  S  *  R  G  M  F  T  F  L  Q  *  Q  I  W  I  L  C  W  W  T  M  H  *  A  N  W  L  *  W  S  F  L  C  M  *  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0021K07.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85252" stop="85132"/>
                    <exon start="84410" stop="84223"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>309</number_coding_nucleotides>
                  <number_encoded_amino_acids>103</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSTLVDLSVLLKTAFFVLFSERNYMANISTCSLLVAAVFLVGILMIPSEILGETCYQIHPEILCDEGKVEGECLPFCNDKFGSSAGGQCIEQIGFDGPFCACD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="92321" PGL_stop="88999"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="92321" e_stop="92212"/>
            <exon e_start="91385" e_stop="91049"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.974" acc_prob="0.985" e_score="0.900"/>
          <exon-only e_score="0.973"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.900">
            <gDNA_exon_boundary e_start="92321" e_stop="92212" e_length="110"/>
          </exon>
          <intron i_serial="1" don_prob="0.974" acc_prob="0.985">
            <gDNA_intron_boundary i_start="92211" i_stop="91386" i_length="826"/>
          </intron>
          <exon e_serial="2" e_score="0.973">
            <gDNA_exon_boundary e_start="91385" e_stop="91049" e_length="337"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92321" stop="92212"/>
              <exon start="91385" stop="91049"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335900" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATTCCCAAATCTTCTAAATCCTAACTGCGGTCGTCCTTCTTCTTCACTCATACTGTCCGAAGCTGTGCGGTTTGCGGTGGCGGCGCTGCTCATCTTCAACGGCAAAAAG : ATGGAAATCAAGGCAGATGGAAGTGATGGATCATTGGTTTTAATCAAGCAAGGAGCTGAGGCTGTGAGTTTATATTTAGTTCATATAAAACTTTCCTGTAATATTTCTGATCTTTTTCTCTCACTTTTTTGGGAAAGATTTTGTGTGCACATGTGTCTTTTGTATAGTTTATGAGTTAATAATAATTTATACTACTGTTTCTGCCAATGTTCATTTGATGGCAAGTAGTTGTTGACTCTAGAATTTCTGAAACACTTTATCTTGTTTCTCTGTTGAGGATATCAGAGGGTATTTGAGTCAACATTTGTGGGTAGTAGAAGGTGTATTATCAAGGAAC</gDNA_template>
            <first_frame> N  S  Q  I  F  *  I  L  T  A  V  V  L  L  L  H  S  Y  C  P  K  L  C  G  L  R  W  R  R  C  S  S  S  T  A  K  R :   W  K  S  R  Q  M  E  V  M  D  H  W  F  *  S  S  K  E  L  R  L  *  V  Y  I  *  F  I  *  N  F  P  V  I  F  L  I  F  F  S  H  F  F  G  K  D  F  V  C  T  C  V  F  C  I  V  Y  E  L  I  I  I  Y  T  T  V  S  A  N  V  H  L  M  A  S  S  C  *  L  *  N  F  *  N  T  L  S  C  F  S  V  E  D  I  R  G  Y  L  S  Q  H  L  W  V  V  E  G  V  L  S  R  N </first_frame>
            <second_frame>  I  P  K  S  S  K  S  *  L  R  S  S  F  F  F  T  H  T  V  R  S  C  A  V  C  G  G  G  A  A  H  L  Q  R  Q  K   : D  G  N  Q  G  R  W  K  *  W  I  I  G  F  N  Q  A  R  S  *  G  C  E  F  I  F  S  S  Y  K  T  F  L  *  Y  F  *  S  F  S  L  T  F  L  G  K  I  L  C  A  H  V  S  F  V  *  F  M  S  *  *  *  F  I  L  L  F  L  P  M  F  I  *  W  Q  V  V  V  D  S  R  I  S  E  T  L  Y  L  V  S  L  L  R  I  S  E  G  I  *  V  N  I  C  G  *  *  K  V  Y  Y  Q  G   </second_frame>
            <third_frame>   F  P  N  L  L  N  P  N  C  G  R  P  S  S  S  L  I  L  S  E  A  V  R  F  A  V  A  A  L  L  I  F  N  G  K  K  :  M  E  I  K  A  D  G  S  D  G  S  L  V  L  I  K  Q  G  A  E  A  V  S  L  Y  L  V  H  I  K  L  S  C  N  I  S  D  L  F  L  S  L  F  W  E  R  F  C  V  H  M  C  L  L  Y  S  L  *  V  N  N  N  L  Y  Y  C  F  C  Q  C  S  F  D  G  K  *  L  L  T  L  E  F  L  K  H  F  I  L  F  L  C  *  G  Y  Q  R  V  F  E  S  T  F  V  G  S  R  R  C  I  I  K  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0021K07.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92319" stop="92212"/>
                    <exon start="91385" stop="91212"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FPNLLNPNCGRPSSSLILSEAVRFAVAALLIFNGKKMEIKADGSDGSLVLIKQGAEAVSLYLVHIKLSCNISDLFLSLFWERFCVHMCLLYSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="92313" e_stop="92212"/>
            <exon e_start="91385" e_stop="91323"/>
            <exon e_start="91100" e_stop="90984"/>
            <exon e_start="90900" e_stop="90622"/>
            <exon e_start="90464" e_stop="90351"/>
            <exon e_start="90059" e_stop="89987"/>
            <exon e_start="89854" e_stop="89788"/>
            <exon e_start="89257" e_stop="88999"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.974" acc_prob="0.985" e_score="0.990"/>
          <exon-intron don_prob="0.993" acc_prob="0.031" e_score="1.000"/>
          <exon-intron don_prob="0.949" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.633" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="92313" e_stop="92212" e_length="102"/>
          </exon>
          <intron i_serial="1" don_prob="0.974" acc_prob="0.985">
            <gDNA_intron_boundary i_start="92211" i_stop="91386" i_length="826"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="91385" e_stop="91323" e_length="63"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.031">
            <gDNA_intron_boundary i_start="91322" i_stop="91101" i_length="222"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="91100" e_stop="90984" e_length="117"/>
          </exon>
          <intron i_serial="3" don_prob="0.949" acc_prob="0.998">
            <gDNA_intron_boundary i_start="90983" i_stop="90901" i_length="83"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="90900" e_stop="90622" e_length="279"/>
          </exon>
          <intron i_serial="4" don_prob="0.976" acc_prob="0.987">
            <gDNA_intron_boundary i_start="90621" i_stop="90465" i_length="157"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="90464" e_stop="90351" e_length="114"/>
          </exon>
          <intron i_serial="5" don_prob="0.633" acc_prob="0.987">
            <gDNA_intron_boundary i_start="90350" i_stop="90060" i_length="291"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="90059" e_stop="89987" e_length="73"/>
          </exon>
          <intron i_serial="6" don_prob="0.961" acc_prob="0.994">
            <gDNA_intron_boundary i_start="89986" i_stop="89855" i_length="132"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="89854" e_stop="89788" e_length="67"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.999">
            <gDNA_intron_boundary i_start="89787" i_stop="89258" i_length="530"/>
          </intron>
          <exon e_serial="8" e_score="0.981">
            <gDNA_exon_boundary e_start="89257" e_stop="88999" e_length="259"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92313" stop="92212"/>
              <exon start="91385" stop="91323"/>
              <exon start="91100" stop="90984"/>
              <exon start="90900" stop="90622"/>
              <exon start="90464" stop="90351"/>
              <exon start="90059" stop="89987"/>
              <exon start="89854" stop="89788"/>
              <exon start="89257" stop="88999"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U316951" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATCTTCTAAATCCTAACTGCGGTCGTCCTTCTTCTTCACTCATACTGTCCGAAGCTGTGCGGTTTGCGGTGGCGGCGCTGCTCATCTTCAACGGCAAAAAG : ATGGAAATCAAGGCAGATGGAAGTGATGGATCATTGGTTTTAATCAAGCAAGGAGCTGAGGCT : AGGGTATTTGAGTCAACATTTGTGGGTAGTAGAAGGTGTATTATCAAGGAACGGTTTTCAAAGAAATACAGGCATCCGATTTTGGACTCAAAGCTCACTCTTAAACGGTTGAATGCG : GAAGCAAGGTGCATGACAAAAGCTAGACGGCTTGGTGTTGTCACTCCAGTGTTGTATGCTGTTGACACTGTTATGCACACTCTCACCTTTGAATATGTTGAAGGTCCTTCGGTGAAAGATATATTGCTTGGCTTTGGACTAGTTGGAGTTGACGAAGAACGAATGGCTGATATTACAACACAGATTGGTAATGCTATTGGAAAACTACACGATGGTGGCCTAGTCCATGGCGATTTGACAACATCAAACATGTTACTGAGGAGTTCTGCCAATCAGCTG : GTGCTGATTGACTTTGGTCTAAGCTTTACTTCAACGCTTCCAGAAGATAAAGCAGTTGATTTATATGTACTGGAACGTGCTTTACTCTCTATGCACTCTTCTTGTGGAAATGTG : ATGGACCGTATACTTGCTGCATATAGGAAGTCCTCAAAGCAATGGTCATCAACCTTGAACAAGCTAGCGGAAG : TGAGGCAAAGAGGAAGAAAGCGCACAATGGTTGGTTGAGTTTCTGCAGTTCTGCACTCCACGTGGAG : TGATGACATGGGGCAGGAGAAAGCTTAAGACTGCAAAGACCAATCTGTATTCTTGATTATTGTAGTGTGGGTGATGCTACTCATGTTAATTGTTTGAATTTGCCTTGTATCTACTATTATCTGCATTCTTATTCAACCCGTAGAAGAAACTGCTGCCTTGGTAATTGGATTATTTGTAGACGAATCTCTGTTAAGGTTGATCCAAACGACAACGTTTACACATTTTACAACTCATCATGCATGTTCTTCAAATCCCAAT</gDNA_template>
            <first_frame> N  L  L  N  P  N  C  G  R  P  S  S  S  L  I  L  S  E  A  V  R  F  A  V  A  A  L  L  I  F  N  G  K  K  :  M  E  I  K  A  D  G  S  D  G  S  L  V  L  I  K  Q  G  A  E  A  :  R  V  F  E  S  T  F  V  G  S  R  R  C  I  I  K  E  R  F  S  K  K  Y  R  H  P  I  L  D  S  K  L  T  L  K  R  L  N  A  :  E  A  R  C  M  T  K  A  R  R  L  G  V  V  T  P  V  L  Y  A  V  D  T  V  M  H  T  L  T  F  E  Y  V  E  G  P  S  V  K  D  I  L  L  G  F  G  L  V  G  V  D  E  E  R  M  A  D  I  T  T  Q  I  G  N  A  I  G  K  L  H  D  G  G  L  V  H  G  D  L  T  T  S  N  M  L  L  R  S  S  A  N  Q  L  :  V  L  I  D  F  G  L  S  F  T  S  T  L  P  E  D  K  A  V  D  L  Y  V  L  E  R  A  L  L  S  M  H  S  S  C  G  N  V  :  M  D  R  I  L  A  A  Y  R  K  S  S  K  Q  W  S  S  T  L  N  K  L  A  E   : V  R  Q  R  G  R  K  R  T  M  V  G  *  V  S  A  V  L  H  S  T  W  S :   D  D  M  G  Q  E  K  A  *  D  C  K  D  Q  S  V  F  L  I  I  V  V  W  V  M  L  L  M  L  I  V  *  I  C  L  V  S  T  I  I  C  I  L  I  Q  P  V  E  E  T  A  A  L  V  I  G  L  F  V  D  E  S  L  L  R  L  I  Q  T  T  T  F  T  H  F  T  T  H  H  A  C  S  S  N  P  N </first_frame>
            <second_frame>  I  F  *  I  L  T  A  V  V  L  L  L  H  S  Y  C  P  K  L  C  G  L  R  W  R  R  C  S  S  S  T  A  K  R :   W  K  S  R  Q  M  E  V  M  D  H  W  F  *  S  S  K  E  L  R  L :   G  Y  L  S  Q  H  L  W  V  V  E  G  V  L  S  R  N  G  F  Q  R  N  T  G  I  R  F  W  T  Q  S  S  L  L  N  G  *  M  R :   K  Q  G  A  *  Q  K  L  D  G  L  V  L  S  L  Q  C  C  M  L  L  T  L  L  C  T  L  S  P  L  N  M  L  K  V  L  R  *  K  I  Y  C  L  A  L  D  *  L  E  L  T  K  N  E  W  L  I  L  Q  H  R  L  V  M  L  L  E  N  Y  T  M  V  A  *  S  M  A  I  *  Q  H  Q  T  C  Y  *  G  V  L  P  I  S  W :   C  *  L  T  L  V  *  A  L  L  Q  R  F  Q  K  I  K  Q  L  I  Y  M  Y  W  N  V  L  Y  S  L  C  T  L  L  V  E  M  * :   W  T  V  Y  L  L  H  I  G  S  P  Q  S  N  G  H  Q  P  *  T  S  *  R  K  :  *  G  K  E  E  E  S  A  Q  W  L  V  E  F  L  Q  F  C  T  P  R  G   : V  M  T  W  G  R  R  K  L  K  T  A  K  T  N  L  Y  S  *  L  L  *  C  G  *  C  Y  S  C  *  L  F  E  F  A  L  Y  L  L  L  S  A  F  L  F  N  P  *  K  K  L  L  P  W  *  L  D  Y  L  *  T  N  L  C  *  G  *  S  K  R  Q  R  L  H  I  L  Q  L  I  M  H  V  L  Q  I  P   </second_frame>
            <third_frame>   S  S  K  S  *  L  R  S  S  F  F  F  T  H  T  V  R  S  C  A  V  C  G  G  G  A  A  H  L  Q  R  Q  K   : D  G  N  Q  G  R  W  K  *  W  I  I  G  F  N  Q  A  R  S  *  G   : *  G  I  *  V  N  I  C  G  *  *  K  V  Y  Y  Q  G  T  V  F  K  E  I  Q  A  S  D  F  G  L  K  A  H  S  *  T  V  E  C   : G  S  K  V  H  D  K  S  *  T  A  W  C  C  H  S  S  V  V  C  C  *  H  C  Y  A  H  S  H  L  *  I  C  *  R  S  F  G  E  R  Y  I  A  W  L  W  T  S  W  S  *  R  R  T  N  G  *  Y  Y  N  T  D  W  *  C  Y  W  K  T  T  R  W  W  P  S  P  W  R  F  D  N  I  K  H  V  T  E  E  F  C  Q  S  A   : G  A  D  *  L  W  S  K  L  Y  F  N  A  S  R  R  *  S  S  *  F  I  C  T  G  T  C  F  T  L  Y  A  L  F  L  W  K  C   : D  G  P  Y  T  C  C  I  *  E  V  L  K  A  M  V  I  N  L  E  Q  A  S  G  S :   E  A  K  R  K  K  A  H  N  G  W  L  S  F  C  S  S  A  L  H  V  E  :  *  *  H  G  A  G  E  S  L  R  L  Q  R  P  I  C  I  L  D  Y  C  S  V  G  D  A  T  H  V  N  C  L  N  L  P  C  I  Y  Y  Y  L  H  S  Y  S  T  R  R  R  N  C  C  L  G  N  W  I  I  C  R  R  I  S  V  K  V  D  P  N  D  N  V  Y  T  F  Y  N  S  S  C  M  F  F  K  S  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0021K07.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92313" stop="92212"/>
                    <exon start="91385" stop="91323"/>
                    <exon start="91100" stop="90984"/>
                    <exon start="90900" stop="90622"/>
                    <exon start="90464" stop="90351"/>
                    <exon start="90059" stop="89987"/>
                    <exon start="89854" stop="89817"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>783</number_coding_nucleotides>
                  <number_encoded_amino_acids>261</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLLNPNCGRPSSSLILSEAVRFAVAALLIFNGKKMEIKADGSDGSLVLIKQGAEARVFESTFVGSRRCIIKERFSKKYRHPILDSKLTLKRLNAEARCMTKARRLGVVTPVLYAVDTVMHTLTFEYVEGPSVKDILLGFGLVGVDEERMADITTQIGNAIGKLHDGGLVHGDLTTSNMLLRSSANQLVLIDFGLSFTSTLPEDKAVDLYVLERALLSMHSSCGNVMDRILAAYRKSSKQWSSTLNKLAEVRQRGRKRTMVG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0021K07.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89251" stop="89000"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HGAGESLRLQRPICILDYCSVGDATHVNCLNLPCIYYYLHSYSTRRRNCCLGNWIICRRISVKVDPNDNVYTFYNSSCMFFKSQ</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="93278" PGL_stop="94818"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="93278" e_stop="93472"/>
            <exon e_start="94245" e_stop="94818"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="93278" e_stop="93472" e_length="195"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.999">
            <gDNA_intron_boundary i_start="93473" i_stop="94244" i_length="772"/>
          </intron>
          <exon e_serial="2" e_score="0.991">
            <gDNA_exon_boundary e_start="94245" e_stop="94818" e_length="574"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93278" stop="93472"/>
              <exon start="94245" stop="94818"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U332676" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTCGGTGTAACCATTAGAGTTTGCTAACACAATTGGTGGATGGCTCCTCTAAAGAAATCCAAGAAAGATTCTAACAAGTTGAAGAAAATCAAAGCCAAAAACAAGAAAAACAACATTGTTCCTGCTGAGAACAAAGGAACTGAATGCGATTGGTGGGATAGTTTCTGGCACAAGAATAAAACATCAACCCCAG : GTTCTGGTGTACCTAGTGATGAAGAGGAAGGTTTCAAGTATTTTTTCCGTGTTTCCAACAAGACTTTTGATTACATATGTTCACTTGTAAGGGAGGACCTTATCTCAAGACCTCCTTCAGGTCTGATAAACATTGAGGGAAGACTTCTTAGTGTTGAGAAGCAAGTTGCGATTGCATTGAGAAGATTGGCTTCTGGTGAATCCCAAGTTTCAGTTGGGGCATCATTTGGGGTTGGGCAGTCCACTGTGTCTCAGGTTACCTGGAGATTCATTGAGGCACTGGAAGAACGTGCAAAGCACCATCTTAAGTGGCCAGAACCTAGTAAGATGGATATAATCAAGTCTGAGTTTGAACAATCATTTGGTTTGCCTAACTGTTGTGGAGCAATTGATGCAACTCACATCATAATGACTCTTCCTGCTATTCAAACCTCAGATGATTGGTGTGATCAGGAAAGCAATTACAGCATGCTTTTGCAAGGTATTGTGGACAGCGAGATGCGTTTTTTAGACATAGTGACAGGATGGCCTGGGGGCATGACCACTTCAAGGCTGTTCAAGTGCTCTGGATTTTA</gDNA_template>
            <first_frame> F  S  V  *  P  L  E  F  A  N  T  I  G  G  W  L  L  *  R  N  P  R  K  I  L  T  S  *  R  K  S  K  P  K  T  R  K  T  T  L  F  L  L  R  T  K  E  L  N  A  I  G  G  I  V  S  G  T  R  I  K  H  Q  P  Q  :  V  L  V  Y  L  V  M  K  R  K  V  S  S  I  F  S  V  F  P  T  R  L  L  I  T  Y  V  H  L  *  G  R  T  L  S  Q  D  L  L  Q  V  *  *  T  L  R  E  D  F  L  V  L  R  S  K  L  R  L  H  *  E  D  W  L  L  V  N  P  K  F  Q  L  G  H  H  L  G  L  G  S  P  L  C  L  R  L  P  G  D  S  L  R  H  W  K  N  V  Q  S  T  I  L  S  G  Q  N  L  V  R  W  I  *  S  S  L  S  L  N  N  H  L  V  C  L  T  V  V  E  Q  L  M  Q  L  T  S  *  *  L  F  L  L  F  K  P  Q  M  I  G  V  I  R  K  A  I  T  A  C  F  C  K  V  L  W  T  A  R  C  V  F  *  T  *  *  Q  D  G  L  G  A  *  P  L  Q  G  C  S  S  A  L  D  F  </first_frame>
            <second_frame>  F  R  C  N  H  *  S  L  L  T  Q  L  V  D  G  S  S  K  E  I  Q  E  R  F  *  Q  V  E  E  N  Q  S  Q  K  Q  E  K  Q  H  C  S  C  *  E  Q  R  N  *  M  R  L  V  G  *  F  L  A  Q  E  *  N  I  N  P  R :   F  W  C  T  *  *  *  R  G  R  F  Q  V  F  F  P  C  F  Q  Q  D  F  *  L  H  M  F  T  C  K  G  G  P  Y  L  K  T  S  F  R  S  D  K  H  *  G  K  T  S  *  C  *  E  A  S  C  D  C  I  E  K  I  G  F  W  *  I  P  S  F  S  W  G  I  I  W  G  W  A  V  H  C  V  S  G  Y  L  E  I  H  *  G  T  G  R  T  C  K  A  P  S  *  V  A  R  T  *  *  D  G  Y  N  Q  V  *  V  *  T  I  I  W  F  A  *  L  L  W  S  N  *  C  N  S  H  H  N  D  S  S  C  Y  S  N  L  R  *  L  V  *  S  G  K  Q  L  Q  H  A  F  A  R  Y  C  G  Q  R  D  A  F  F  R  H  S  D  R  M  A  W  G  H  D  H  F  K  A  V  Q  V  L  W  I  L </second_frame>
            <third_frame>   F  G  V  T  I  R  V  C  *  H  N  W  W  M  A  P  L  K  K  S  K  K  D  S  N  K  L  K  K  I  K  A  K  N  K  K  N  N  I  V  P  A  E  N  K  G  T  E  C  D  W  W  D  S  F  W  H  K  N  K  T  S  T  P   : G  S  G  V  P  S  D  E  E  E  G  F  K  Y  F  F  R  V  S  N  K  T  F  D  Y  I  C  S  L  V  R  E  D  L  I  S  R  P  P  S  G  L  I  N  I  E  G  R  L  L  S  V  E  K  Q  V  A  I  A  L  R  R  L  A  S  G  E  S  Q  V  S  V  G  A  S  F  G  V  G  Q  S  T  V  S  Q  V  T  W  R  F  I  E  A  L  E  E  R  A  K  H  H  L  K  W  P  E  P  S  K  M  D  I  I  K  S  E  F  E  Q  S  F  G  L  P  N  C  C  G  A  I  D  A  T  H  I  I  M  T  L  P  A  I  Q  T  S  D  D  W  C  D  Q  E  S  N  Y  S  M  L  L  Q  G  I  V  D  S  E  M  R  F  L  D  I  V  T  G  W  P  G  G  M  T  T  S  R  L  F  K  C  S  G  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0021K07.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93307" stop="93472"/>
                    <exon start="94245" stop="94816"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>738</number_coding_nucleotides>
                  <number_encoded_amino_acids>246</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HNWWMAPLKKSKKDSNKLKKIKAKNKKNNIVPAENKGTECDWWDSFWHKNKTSTPGSGVPSDEEEGFKYFFRVSNKTFDYICSLVREDLISRPPSGLINIEGRLLSVEKQVAIALRRLASGESQVSVGASFGVGQSTVSQVTWRFIEALEERAKHHLKWPEPSKMDIIKSEFEQSFGLPNCCGAIDATHIIMTLPAIQTSDDWCDQESNYSMLLQGIVDSEMRFLDIVTGWPGGMTTSRLFKCSGF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="99254" PGL_stop="97592"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="99254" e_stop="99180"/>
            <exon e_start="98869" e_stop="98753"/>
            <exon e_start="98626" e_stop="98500"/>
            <exon e_start="98278" e_stop="97992"/>
            <exon e_start="97909" e_stop="97719"/>
            <exon e_start="97609" e_stop="97592"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.889" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.970" e_score="1.000"/>
          <exon-intron don_prob="0.913" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="99254" e_stop="99180" e_length="75"/>
          </exon>
          <intron i_serial="1" don_prob="0.889" acc_prob="0.999">
            <gDNA_intron_boundary i_start="99179" i_stop="98870" i_length="310"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="98869" e_stop="98753" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.970">
            <gDNA_intron_boundary i_start="98752" i_stop="98627" i_length="126"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="98626" e_stop="98500" e_length="127"/>
          </exon>
          <intron i_serial="3" don_prob="0.913" acc_prob="0.992">
            <gDNA_intron_boundary i_start="98499" i_stop="98279" i_length="221"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="98278" e_stop="97992" e_length="287"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.999">
            <gDNA_intron_boundary i_start="97991" i_stop="97910" i_length="82"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="97909" e_stop="97719" e_length="191"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.996">
            <gDNA_intron_boundary i_start="97718" i_stop="97610" i_length="109"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="97609" e_stop="97592" e_length="18"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99254" stop="99180"/>
              <exon start="98869" stop="98753"/>
              <exon start="98626" stop="98500"/>
              <exon start="98278" stop="97992"/>
              <exon start="97909" stop="97719"/>
              <exon start="97609" stop="97592"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345925" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCGCCATTGACGTCTGTCATATTGGGAACGATTCTCGTTTATATAACGCATGCTGAAAAACACGGTGTTGCTGTG : ATTGGAGAGCTGAAGAAAGGGATAAATCCACCATCAATAATGGATCTGTCGTTTGGATCGAAATATATGACAACGGCTATCAAAACTGGCATAGTCACGGGTGTCATTGCCCTTGCT : GAAGGAATAGCAGTAGGTCGAAGTTTTGCAATGTTCAAGAATTACCATATAGATGGTAACAAAGAGATGATTGCTTTTGGGATGATGAACATTGTTGGCTCATGCACTTCTTGTTACCTCACTACTG : GGCCATTCTCGCGATCAGCAGTGAACTTCAATGCTGGATGCAAAACAGCAGTATCAAACATTGTCATGGCGTTGGCTGTGATGGTGACGTTGCTATTGCTAACGCCATTGTTCCACTTCACTCCTCTCGTCGTGTTGTCATCCATTATTATTGCTGCCATGCTCGGACTCATCGACTATAATGCTGCCATTCATCTCTGGCATGTCGACAAATTCGACTTCCTCGTTTGCATGAGTGCATACATTGGTGTTGTCTTTGGCAACATTGAAATTGGCTTAGTCATGGCT : GTTGGCTTATCGTTGCTAAGGGTATTACTTTCTGTAGCAAGGCCAAGGACTTTAGTACTTGGTAATATTCCCAATTCTATGATCTACAGAAATGTGGAGCAATATCCAAATACAAACAACGTTCCAGGCGTTCTCATACTTGACATTGGAGCTCCTATTTTCTTCACTAACTCAAGCTATTTAAGAGAGAG : GATCTCAAGGTGGATTGA</gDNA_template>
            <first_frame> A  P  L  T  S  V  I  L  G  T  I  L  V  Y  I  T  H  A  E  K  H  G  V  A  V  :  I  G  E  L  K  K  G  I  N  P  P  S  I  M  D  L  S  F  G  S  K  Y  M  T  T  A  I  K  T  G  I  V  T  G  V  I  A  L  A  :  E  G  I  A  V  G  R  S  F  A  M  F  K  N  Y  H  I  D  G  N  K  E  M  I  A  F  G  M  M  N  I  V  G  S  C  T  S  C  Y  L  T  T   : G  P  F  S  R  S  A  V  N  F  N  A  G  C  K  T  A  V  S  N  I  V  M  A  L  A  V  M  V  T  L  L  L  L  T  P  L  F  H  F  T  P  L  V  V  L  S  S  I  I  I  A  A  M  L  G  L  I  D  Y  N  A  A  I  H  L  W  H  V  D  K  F  D  F  L  V  C  M  S  A  Y  I  G  V  V  F  G  N  I  E  I  G  L  V  M  A  :  V  G  L  S  L  L  R  V  L  L  S  V  A  R  P  R  T  L  V  L  G  N  I  P  N  S  M  I  Y  R  N  V  E  Q  Y  P  N  T  N  N  V  P  G  V  L  I  L  D  I  G  A  P  I  F  F  T  N  S  S  Y  L  R  E  R :   I  S  R  W  I   </first_frame>
            <second_frame>  R  H  *  R  L  S  Y  W  E  R  F  S  F  I  *  R  M  L  K  N  T  V  L  L  * :   L  E  S  *  R  K  G  *  I  H  H  Q  *  W  I  C  R  L  D  R  N  I  *  Q  R  L  S  K  L  A  *  S  R  V  S  L  P  L  L :   K  E  *  Q  *  V  E  V  L  Q  C  S  R  I  T  I  *  M  V  T  K  R  *  L  L  L  G  *  *  T  L  L  A  H  A  L  L  V  T  S  L  L  :  G  H  S  R  D  Q  Q  *  T  S  M  L  D  A  K  Q  Q  Y  Q  T  L  S  W  R  W  L  *  W  *  R  C  Y  C  *  R  H  C  S  T  S  L  L  S  S  C  C  H  P  L  L  L  L  P  C  S  D  S  S  T  I  M  L  P  F  I  S  G  M  S  T  N  S  T  S  S  F  A  *  V  H  T  L  V  L  S  L  A  T  L  K  L  A  *  S  W  L :   L  A  Y  R  C  *  G  Y  Y  F  L  *  Q  G  Q  G  L  *  Y  L  V  I  F  P  I  L  *  S  T  E  M  W  S  N  I  Q  I  Q  T  T  F  Q  A  F  S  Y  L  T  L  E  L  L  F  S  S  L  T  Q  A  I  *  E  R   : G  S  Q  G  G  L  </second_frame>
            <third_frame>   A  I  D  V  C  H  I  G  N  D  S  R  L  Y  N  A  C  *  K  T  R  C  C  C   : D  W  R  A  E  E  R  D  K  S  T  I  N  N  G  S  V  V  W  I  E  I  Y  D  N  G  Y  Q  N  W  H  S  H  G  C  H  C  P  C   : *  R  N  S  S  R  S  K  F  C  N  V  Q  E  L  P  Y  R  W  *  Q  R  D  D  C  F  W  D  D  E  H  C  W  L  M  H  F  L  L  P  H  Y  W :   A  I  L  A  I  S  S  E  L  Q  C  W  M  Q  N  S  S  I  K  H  C  H  G  V  G  C  D  G  D  V  A  I  A  N  A  I  V  P  L  H  S  S  R  R  V  V  I  H  Y  Y  C  C  H  A  R  T  H  R  L  *  C  C  H  S  S  L  A  C  R  Q  I  R  L  P  R  L  H  E  C  I  H  W  C  C  L  W  Q  H  *  N  W  L  S  H  G   : C  W  L  I  V  A  K  G  I  T  F  C  S  K  A  K  D  F  S  T  W  *  Y  S  Q  F  Y  D  L  Q  K  C  G  A  I  S  K  Y  K  Q  R  S  R  R  S  H  T  *  H  W  S  S  Y  F  L  H  *  L  K  L  F  K  R  E  :  D  L  K  V  D  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0021K07.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="99254" stop="99180"/>
                    <exon start="98869" stop="98753"/>
                    <exon start="98626" stop="98500"/>
                    <exon start="98278" stop="97992"/>
                    <exon start="97909" stop="97719"/>
                    <exon start="97609" stop="97594"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>813</number_coding_nucleotides>
                  <number_encoded_amino_acids>271</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>APLTSVILGTILVYITHAEKHGVAVIGELKKGINPPSIMDLSFGSKYMTTAIKTGIVTGVIALAEGIAVGRSFAMFKNYHIDGNKEMIAFGMMNIVGSCTSCYLTTGPFSRSAVNFNAGCKTAVSNIVMALAVMVTLLLLTPLFHFTPLVVLSSIIIAAMLGLIDYNAAIHLWHVDKFDFLVCMSAYIGVVFGNIEIGLVMAVGLSLLRVLLSVARPRTLVLGNIPNSMIYRNVEQYPNTNNVPGVLILDIGAPIFFTNSSYLRERISRWI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="112493" PGL_stop="111054"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="112493" e_stop="112223"/>
            <exon e_start="112143" e_stop="112030"/>
            <exon e_start="111960" e_stop="111803"/>
            <exon e_start="111725" e_stop="111054"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.997" e_score="0.996"/>
          <exon-intron don_prob="1.000" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="112493" e_stop="112223" e_length="271"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="112222" i_stop="112144" i_length="79"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="112143" e_stop="112030" e_length="114"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.963">
            <gDNA_intron_boundary i_start="112029" i_stop="111961" i_length="69"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="111960" e_stop="111803" e_length="158"/>
          </exon>
          <intron i_serial="3" don_prob="0.964" acc_prob="0.992">
            <gDNA_intron_boundary i_start="111802" i_stop="111726" i_length="77"/>
          </intron>
          <exon e_serial="4" e_score="0.996">
            <gDNA_exon_boundary e_start="111725" e_stop="111054" e_length="672"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="112493" stop="112223"/>
              <exon start="112143" stop="112030"/>
              <exon start="111960" stop="111803"/>
              <exon start="111725" stop="111054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U327120" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATTGTAAGATGTGGCAGCAGACGTGGAATACGCCTTACCGGAAAGATGACGTGGAAGGCGGAGCAAGGCCGTTGTATCCGGCGATGTTGGAGAATCCACAACTCCGTTGGGGTTTTATTCGGAAAGTTTACTCAATTTTGTCTCTACAGTTGCTTATAACAATTGCAGTGGGCGCTGTTGTTGTTACGGTTCACCCAATTGCACATTTTTTTGTGTCAACTGGGGCTGGATTAGCTCTCTATATTCTTCTTATCATCGCTCCCTTCATCA : CATTGAGCCCGTTGTATTACTATCACCAGAAACATCCGGTGAATTTCTTGCTTCTTGGGTTGTTTACAGTTACTCTGGCCTTCGCTGTAGGATTAACTTGTGCCTTCACCAGTG : GGAAAGTAATATTGGAGTCCGTCATATTAACCGCAGCAGTTGTGCTTAGTTTGACCATATACACATTTTGGGCAGCAAGGAGAGGCCACGATTTTAATTTCCTTGGACCATTCTTATTTGGTGCCCTTATGGTTCTCATGTTGTTTGCCTTTATTCAG : TTACTGTTTCCTCTGGGTAGGCTCTCTGTGATGATCTATGGCTGTTTAGCGTCCATTTTGTTCTGCGCATATATAATTTATGATACGGATAGTTTAATCAAGCGCTACACTTACGATGAGTACATCTGGGCTGCTGTCGGACTGTATCTGGACGTTATCAATCTATTCTTATCTATATTGACTATTTTTAGAGCTGCTGAATAGTTTCCTTGACAAATAAATAACAAAAATGTTACATTTGCTCTATAAAGAACATTGTTTATCTATTGTATAAATCAATAATTTTTTTTATTACGAAACTCGTTGTTAGTATTTGTAAGGTTGATGGATATGTGAGTGACCAAAAGTTGATAGCTGAAATATTATATTGTATAAAGGGGTTATATCTGCAAAACATTTGCCCTTTGGGGCAAAGTTGAAATATATAGTAGCCGCAAAAAAGAAGTTTGAGTGAATCAGCCCTACTTTTCGGCCTAAATCCAAATTTGGTTGCTGTTTTGGCAACAATTTTACTTGAAGCAAAACTCATATTGGGCTTTGTCACTCATGTCTTGGAAAGTCAGATCTTGGGCTTCAACTAGCAGGTGTACTTGGGAAAAATCCCAAAGTTTGTGGGTGTACTATAGTTCGACTTCATATATAGACAGATTGAGAATGAACGTTTTCTTTGAA</gDNA_template>
            <first_frame> Y  C  K  M  W  Q  Q  T  W  N  T  P  Y  R  K  D  D  V  E  G  G  A  R  P  L  Y  P  A  M  L  E  N  P  Q  L  R  W  G  F  I  R  K  V  Y  S  I  L  S  L  Q  L  L  I  T  I  A  V  G  A  V  V  V  T  V  H  P  I  A  H  F  F  V  S  T  G  A  G  L  A  L  Y  I  L  L  I  I  A  P  F  I   : T  L  S  P  L  Y  Y  Y  H  Q  K  H  P  V  N  F  L  L  L  G  L  F  T  V  T  L  A  F  A  V  G  L  T  C  A  F  T  S   : G  K  V  I  L  E  S  V  I  L  T  A  A  V  V  L  S  L  T  I  Y  T  F  W  A  A  R  R  G  H  D  F  N  F  L  G  P  F  L  F  G  A  L  M  V  L  M  L  F  A  F  I  Q  :  L  L  F  P  L  G  R  L  S  V  M  I  Y  G  C  L  A  S  I  L  F  C  A  Y  I  I  Y  D  T  D  S  L  I  K  R  Y  T  Y  D  E  Y  I  W  A  A  V  G  L  Y  L  D  V  I  N  L  F  L  S  I  L  T  I  F  R  A  A  E  *  F  P  *  Q  I  N  N  K  N  V  T  F  A  L  *  R  T  L  F  I  Y  C  I  N  Q  *  F  F  L  L  R  N  S  L  L  V  F  V  R  L  M  D  M  *  V  T  K  S  *  *  L  K  Y  Y  I  V  *  R  G  Y  I  C  K  T  F  A  L  W  G  K  V  E  I  Y  S  S  R  K  K  E  V  *  V  N  Q  P  Y  F  S  A  *  I  Q  I  W  L  L  F  W  Q  Q  F  Y  L  K  Q  N  S  Y  W  A  L  S  L  M  S  W  K  V  R  S  W  A  S  T  S  R  C  T  W  E  K  S  Q  S  L  W  V  Y  Y  S  S  T  S  Y  I  D  R  L  R  M  N  V  F  F  E </first_frame>
            <second_frame>  I  V  R  C  G  S  R  R  G  I  R  L  T  G  K  M  T  W  K  A  E  Q  G  R  C  I  R  R  C  W  R  I  H  N  S  V  G  V  L  F  G  K  F  T  Q  F  C  L  Y  S  C  L  *  Q  L  Q  W  A  L  L  L  L  R  F  T  Q  L  H  I  F  L  C  Q  L  G  L  D  *  L  S  I  F  F  L  S  S  L  P  S  S  :  H  *  A  R  C  I  T  I  T  R  N  I  R  *  I  S  C  F  L  G  C  L  Q  L  L  W  P  S  L  *  D  *  L  V  P  S  P  V  :  G  K  *  Y  W  S  P  S  Y  *  P  Q  Q  L  C  L  V  *  P  Y  T  H  F  G  Q  Q  G  E  A  T  I  L  I  S  L  D  H  S  Y  L  V  P  L  W  F  S  C  C  L  P  L  F  S :   Y  C  F  L  W  V  G  S  L  *  *  S  M  A  V  *  R  P  F  C  S  A  H  I  *  F  M  I  R  I  V  *  S  S  A  T  L  T  M  S  T  S  G  L  L  S  D  C  I  W  T  L  S  I  Y  S  Y  L  Y  *  L  F  L  E  L  L  N  S  F  L  D  K  *  I  T  K  M  L  H  L  L  Y  K  E  H  C  L  S  I  V  *  I  N  N  F  F  Y  Y  E  T  R  C  *  Y  L  *  G  *  W  I  C  E  *  P  K  V  D  S  *  N  I  I  L  Y  K  G  V  I  S  A  K  H  L  P  F  G  A  K  L  K  Y  I  V  A  A  K  K  K  F  E  *  I  S  P  T  F  R  P  K  S  K  F  G  C  C  F  G  N  N  F  T  *  S  K  T  H  I  G  L  C  H  S  C  L  G  K  S  D  L  G  L  Q  L  A  G  V  L  G  K  N  P  K  V  C  G  C  T  I  V  R  L  H  I  *  T  D  *  E  *  T  F  S  L   </second_frame>
            <third_frame>   L  *  D  V  A  A  D  V  E  Y  A  L  P  E  R  *  R  G  R  R  S  K  A  V  V  S  G  D  V  G  E  S  T  T  P  L  G  F  Y  S  E  S  L  L  N  F  V  S  T  V  A  Y  N  N  C  S  G  R  C  C  C  Y  G  S  P  N  C  T  F  F  C  V  N  W  G  W  I  S  S  L  Y  S  S  Y  H  R  S  L  H  H :   I  E  P  V  V  L  L  S  P  E  T  S  G  E  F  L  A  S  W  V  V  Y  S  Y  S  G  L  R  C  R  I  N  L  C  L  H  Q  W :   E  S  N  I  G  V  R  H  I  N  R  S  S  C  A  *  F  D  H  I  H  I  L  G  S  K  E  R  P  R  F  *  F  P  W  T  I  L  I  W  C  P  Y  G  S  H  V  V  C  L  Y  S   : V  T  V  S  S  G  *  A  L  C  D  D  L  W  L  F  S  V  H  F  V  L  R  I  Y  N  L  *  Y  G  *  F  N  Q  A  L  H  L  R  *  V  H  L  G  C  C  R  T  V  S  G  R  Y  Q  S  I  L  I  Y  I  D  Y  F  *  S  C  *  I  V  S  L  T  N  K  *  Q  K  C  Y  I  C  S  I  K  N  I  V  Y  L  L  Y  K  S  I  I  F  F  I  T  K  L  V  V  S  I  C  K  V  D  G  Y  V  S  D  Q  K  L  I  A  E  I  L  Y  C  I  K  G  L  Y  L  Q  N  I  C  P  L  G  Q  S  *  N  I  *  *  P  Q  K  R  S  L  S  E  S  A  L  L  F  G  L  N  P  N  L  V  A  V  L  A  T  I  L  L  E  A  K  L  I  L  G  F  V  T  H  V  L  E  S  Q  I  L  G  F  N  *  Q  V  Y  L  G  K  I  P  K  F  V  G  V  L  *  F  D  F  I  Y  R  Q  I  E  N  E  R  F  L  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0021K07.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="112493" stop="112223"/>
                    <exon start="112143" stop="112030"/>
                    <exon start="111960" stop="111803"/>
                    <exon start="111725" stop="111522"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>744</number_coding_nucleotides>
                  <number_encoded_amino_acids>248</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YCKMWQQTWNTPYRKDDVEGGARPLYPAMLENPQLRWGFIRKVYSILSLQLLITIAVGAVVVTVHPIAHFFVSTGAGLALYILLIIAPFITLSPLYYYHQKHPVNFLLLGLFTVTLAFAVGLTCAFTSGKVILESVILTAAVVLSLTIYTFWAARRGHDFNFLGPFLFGALMVLMLFAFIQLLFPLGRLSVMIYGCLASILFCAYIIYDTDSLIKRYTYDEYIWAAVGLYLDVINLFLSILTIFRAAE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0021K07.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="111248" stop="111054"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IQIWLLFWQQFYLKQNSYWALSLMSWKVRSWASTSRCTWEKSQSLWVYYSSTSYIDRLRMNVFFE</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0021K07.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="111501" stop="111307"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QKCYICSIKNIVYLLYKSIIFFITKLVVSICKVDGYVSDQKLIAEILYCIKGLYLQNICPLGQS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="119497" PGL_stop="120161"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="119497" e_stop="120161"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="119497" e_stop="120161" e_length="665"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="119497" stop="120161"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U342447" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCGGAAACTGAGGTTGGGGATGCGCACCAGATTTCTGCTTATGTCTTGAAATGTTCGGAGGCCACATCATGTTGTAGTGTACGGATAGTTGCATGAAGTGTGATGATGGTAGCACTTGGGACAATATCTGTGAAACTGCCTTATCTATCTAGGTTTGTCTGTAATGTAAATGAAGATAGAATTAGTGAGAAATAGTGGTCAAGTCATGAAACCTTTTTTGCTTTTCGTATAACAGCTAGTCGCCCTCTTCAATATTGATTTTAGGCTGCAGCATTTCCCTGTTGATGGAACCATTCTCAATGATCTTGCTTACTTGGAATTATACGTCCAATTTTGTTGCTGGGAGCTGGAGACAAACCAGCGGAACTGCATGACATAGAATGTGAATGGGTCATGCTCTCTGATGATCCTTGACGTTTAAAATAAGCTTTCCTGTTCCGTTGTTTGATCGAAATAACGTGATTGAAGGCTTAATTTCTTCTTCAAGTTTGTCATTTCAGCTATTTATTGACTAGGACTGCATTGCAGGATACTGCACATGCGAAGAAGTATTGGGAAAGAATTGTCTTCTCCTCTACTTATGTTTCTTTCCCTTTATATAATACCTACCTTTCTCCTGTAAAATCTGAAGTTCAAGATCATGATAGCACATGTATGATTATCTA</gDNA_template>
            <first_frame> S  E  T  E  V  G  D  A  H  Q  I  S  A  Y  V  L  K  C  S  E  A  T  S  C  C  S  V  R  I  V  A  *  S  V  M  M  V  A  L  G  T  I  S  V  K  L  P  Y  L  S  R  F  V  C  N  V  N  E  D  R  I  S  E  K  *  W  S  S  H  E  T  F  F  A  F  R  I  T  A  S  R  P  L  Q  Y  *  F  *  A  A  A  F  P  C  *  W  N  H  S  Q  *  S  C  L  L  G  I  I  R  P  I  L  L  L  G  A  G  D  K  P  A  E  L  H  D  I  E  C  E  W  V  M  L  S  D  D  P  *  R  L  K  *  A  F  L  F  R  C  L  I  E  I  T  *  L  K  A  *  F  L  L  Q  V  C  H  F  S  Y  L  L  T  R  T  A  L  Q  D  T  A  H  A  K  K  Y  W  E  R  I  V  F  S  S  T  Y  V  S  F  P  L  Y  N  T  Y  L  S  P  V  K  S  E  V  Q  D  H  D  S  T  C  M  I  I   </first_frame>
            <second_frame>  R  K  L  R  L  G  M  R  T  R  F  L  L  M  S  *  N  V  R  R  P  H  H  V  V  V  Y  G  *  L  H  E  V  *  *  W  *  H  L  G  Q  Y  L  *  N  C  L  I  Y  L  G  L  S  V  M  *  M  K  I  E  L  V  R  N  S  G  Q  V  M  K  P  F  L  L  F  V  *  Q  L  V  A  L  F  N  I  D  F  R  L  Q  H  F  P  V  D  G  T  I  L  N  D  L  A  Y  L  E  L  Y  V  Q  F  C  C  W  E  L  E  T  N  Q  R  N  C  M  T  *  N  V  N  G  S  C  S  L  M  I  L  D  V  *  N  K  L  S  C  S  V  V  *  S  K  *  R  D  *  R  L  N  F  F  F  K  F  V  I  S  A  I  Y  *  L  G  L  H  C  R  I  L  H  M  R  R  S  I  G  K  E  L  S  S  P  L  L  M  F  L  S  L  Y  I  I  P  T  F  L  L  *  N  L  K  F  K  I  M  I  A  H  V  *  L  S  </second_frame>
            <third_frame>   G  N  *  G  W  G  C  A  P  D  F  C  L  C  L  E  M  F  G  G  H  I  M  L  *  C  T  D  S  C  M  K  C  D  D  G  S  T  W  D  N  I  C  E  T  A  L  S  I  *  V  C  L  *  C  K  *  R  *  N  *  *  E  I  V  V  K  S  *  N  L  F  C  F  S  Y  N  S  *  S  P  S  S  I  L  I  L  G  C  S  I  S  L  L  M  E  P  F  S  M  I  L  L  T  W  N  Y  T  S  N  F  V  A  G  S  W  R  Q  T  S  G  T  A  *  H  R  M  *  M  G  H  A  L  *  *  S  L  T  F  K  I  S  F  P  V  P  L  F  D  R  N  N  V  I  E  G  L  I  S  S  S  S  L  S  F  Q  L  F  I  D  *  D  C  I  A  G  Y  C  T  C  E  E  V  L  G  K  N  C  L  L  L  Y  L  C  F  F  P  F  I  *  Y  L  P  F  S  C  K  I  *  S  S  R  S  *  *  H  M  Y  D  Y  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0021K07.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 34 chains have been computed
$ 
$ memory statistics:
$ 66952 bytes spliced alignments in total
$ 17 spliced alignments have been stored
$ 3938 bytes was the average size of a spliced alignment
$ 25400 bytes predicted gene locations in total
$ 16 predicted gene locations have been stored
$ 1587 bytes was the average size of a predicted gene location
$ 2 megabytes was the average size of the backtrace matrix
$ 43 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 08:46:37
-->
