##gff-version 3
##sequence-region C06HBa0055E14.1 1 130047
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match	760	4161	0.996	-	0	ID=SGN-U322467_alignment_1;Target=SGN-U322467 1 896 +
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	4123	4161	1.000	-	0	ID=GTH_SGN_U_tom_match_part_1;Target=SGN-U322467 1 39 +;Parent=SGN-U322467_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	3875	4021	1.000	-	0	ID=GTH_SGN_U_tom_match_part_2;Target=SGN-U322467 40 186 +;Parent=SGN-U322467_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	1763	1855	0.989	-	0	ID=GTH_SGN_U_tom_match_part_3;Target=SGN-U322467 187 279 +;Parent=SGN-U322467_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	1376	1550	1.000	-	0	ID=GTH_SGN_U_tom_match_part_4;Target=SGN-U322467 280 454 +;Parent=SGN-U322467_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	1104	1293	1.000	-	0	ID=GTH_SGN_U_tom_match_part_5;Target=SGN-U322467 455 644 +;Parent=SGN-U322467_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	760	1010	0.992	-	0	ID=GTH_SGN_U_tom_match_part_6;Target=SGN-U322467 645 896 +;Parent=SGN-U322467_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match	4012	6353	0.995	-	0	ID=SGN-U344851_alignment_1;Target=SGN-U344851 1 738 +
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	6202	6353	1.000	-	0	ID=GTH_SGN_U_tom_match_part_7;Target=SGN-U344851 1 152 +;Parent=SGN-U344851_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	5936	6119	1.000	-	0	ID=GTH_SGN_U_tom_match_part_8;Target=SGN-U344851 153 336 +;Parent=SGN-U344851_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	5786	5856	1.000	-	0	ID=GTH_SGN_U_tom_match_part_9;Target=SGN-U344851 337 407 +;Parent=SGN-U344851_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	5560	5711	1.000	-	0	ID=GTH_SGN_U_tom_match_part_10;Target=SGN-U344851 408 559 +;Parent=SGN-U344851_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	4123	4291	0.976	-	0	ID=GTH_SGN_U_tom_match_part_11;Target=SGN-U344851 560 728 +;Parent=SGN-U344851_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	4012	4021	1.000	-	0	ID=GTH_SGN_U_tom_match_part_12;Target=SGN-U344851 729 738 +;Parent=SGN-U344851_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match	6293	6607	0.979	-	0	ID=SGN-U346382_alignment_1;Target=SGN-U346382 1 236 +
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	6473	6607	0.970	-	0	ID=GTH_SGN_U_tom_match_part_13;Target=SGN-U346382 1 135 +;Parent=SGN-U346382_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	6293	6393	0.990	-	0	ID=GTH_SGN_U_tom_match_part_14;Target=SGN-U346382 136 236 +;Parent=SGN-U346382_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match	23208	25207	0.934	-	0	ID=SGN-U334012_alignment_1;Target=SGN-U334012 1 786 -
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	25095	25207	0.929	-	0	ID=GTH_SGN_U_tom_match_part_15;Target=SGN-U334012 1 113 -;Parent=SGN-U334012_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	24890	24990	0.980	-	0	ID=GTH_SGN_U_tom_match_part_16;Target=SGN-U334012 114 214 -;Parent=SGN-U334012_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	23792	23936	0.924	-	0	ID=GTH_SGN_U_tom_match_part_17;Target=SGN-U334012 215 359 -;Parent=SGN-U334012_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	23628	23717	0.978	-	0	ID=GTH_SGN_U_tom_match_part_18;Target=SGN-U334012 360 449 -;Parent=SGN-U334012_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	23208	23542	0.913	-	0	ID=GTH_SGN_U_tom_match_part_19;Target=SGN-U334012 450 786 -;Parent=SGN-U334012_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match	23219	25228	0.986	-	0	ID=SGN-U312918_alignment_1;Target=SGN-U312918 1 794 +
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	25095	25228	0.940	-	0	ID=GTH_SGN_U_tom_match_part_20;Target=SGN-U312918 1 134 +;Parent=SGN-U312918_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	24890	24990	1.000	-	0	ID=GTH_SGN_U_tom_match_part_21;Target=SGN-U312918 135 235 +;Parent=SGN-U312918_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	23792	23936	0.986	-	0	ID=GTH_SGN_U_tom_match_part_22;Target=SGN-U312918 236 380 +;Parent=SGN-U312918_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	23628	23717	1.000	-	0	ID=GTH_SGN_U_tom_match_part_23;Target=SGN-U312918 381 470 +;Parent=SGN-U312918_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	23219	23542	0.997	-	0	ID=GTH_SGN_U_tom_match_part_24;Target=SGN-U312918 471 794 +;Parent=SGN-U312918_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match	26675	28514	0.990	-	0	ID=SGN-U312916_alignment_1;Target=SGN-U312916 1 736 +
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	28200	28514	1.000	-	0	ID=GTH_SGN_U_tom_match_part_25;Target=SGN-U312916 1 315 +;Parent=SGN-U312916_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	27111	27255	1.000	-	0	ID=GTH_SGN_U_tom_match_part_26;Target=SGN-U312916 316 460 +;Parent=SGN-U312916_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	26945	27034	1.000	-	0	ID=GTH_SGN_U_tom_match_part_27;Target=SGN-U312916 461 550 +;Parent=SGN-U312916_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	26675	26859	0.962	-	0	ID=GTH_SGN_U_tom_match_part_28;Target=SGN-U312916 551 736 +;Parent=SGN-U312916_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match	29341	29518	0.910	+	0	ID=SGN-U340622_alignment_1;Target=SGN-U340622 1 178 +
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	29341	29518	0.910	+	0	ID=GTH_SGN_U_tom_match_part_29;Target=SGN-U340622 1 178 +;Parent=SGN-U340622_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match	31413	32034	0.997	-	0	ID=SGN-U345530_alignment_1;Target=SGN-U345530 1 622 +
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	31413	32034	0.997	-	0	ID=GTH_SGN_U_tom_match_part_30;Target=SGN-U345530 1 622 +;Parent=SGN-U345530_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match	64984	65653	1.000	+	0	ID=SGN-U330571_alignment_1;Target=SGN-U330571 1 670 +
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	64984	65653	1.000	+	0	ID=GTH_SGN_U_tom_match_part_31;Target=SGN-U330571 1 670 +;Parent=SGN-U330571_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match	65745	66445	0.994	-	0	ID=SGN-U341287_alignment_1;Target=SGN-U341287 1 701 +
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	65745	66445	0.994	-	0	ID=GTH_SGN_U_tom_match_part_32;Target=SGN-U341287 1 701 +;Parent=SGN-U341287_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match	68710	77257	0.993	+	0	ID=SGN-U319873_alignment_1;Target=SGN-U319873 1 2321 +
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	68710	69089	0.971	+	0	ID=GTH_SGN_U_tom_match_part_33;Target=SGN-U319873 1 380 +;Parent=SGN-U319873_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	69626	69856	0.991	+	0	ID=GTH_SGN_U_tom_match_part_34;Target=SGN-U319873 381 611 +;Parent=SGN-U319873_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	70413	70469	1.000	+	0	ID=GTH_SGN_U_tom_match_part_35;Target=SGN-U319873 612 668 +;Parent=SGN-U319873_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	70558	70686	0.992	+	0	ID=GTH_SGN_U_tom_match_part_36;Target=SGN-U319873 669 797 +;Parent=SGN-U319873_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	71196	71273	1.000	+	0	ID=GTH_SGN_U_tom_match_part_37;Target=SGN-U319873 798 875 +;Parent=SGN-U319873_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	71390	71460	0.986	+	0	ID=GTH_SGN_U_tom_match_part_38;Target=SGN-U319873 876 946 +;Parent=SGN-U319873_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	71575	71618	1.000	+	0	ID=GTH_SGN_U_tom_match_part_39;Target=SGN-U319873 947 990 +;Parent=SGN-U319873_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	71710	71917	1.000	+	0	ID=GTH_SGN_U_tom_match_part_40;Target=SGN-U319873 991 1198 +;Parent=SGN-U319873_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	73214	73775	1.000	+	0	ID=GTH_SGN_U_tom_match_part_41;Target=SGN-U319873 1199 1760 +;Parent=SGN-U319873_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	75961	76104	1.000	+	0	ID=GTH_SGN_U_tom_match_part_42;Target=SGN-U319873 1761 1904 +;Parent=SGN-U319873_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	76841	77257	0.998	+	0	ID=GTH_SGN_U_tom_match_part_43;Target=SGN-U319873 1905 2321 +;Parent=SGN-U319873_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match	77807	78239	1.000	-	0	ID=SGN-U327018_alignment_1;Target=SGN-U327018 1 433 +
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	77807	78239	1.000	-	0	ID=GTH_SGN_U_tom_match_part_44;Target=SGN-U327018 1 433 +;Parent=SGN-U327018_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match	81466	83908	0.989	+	0	ID=SGN-U320774_alignment_1;Target=SGN-U320774 1 496 +
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	81466	81523	0.914	+	0	ID=GTH_SGN_U_tom_match_part_45;Target=SGN-U320774 1 58 +;Parent=SGN-U320774_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	82243	82374	1.000	+	0	ID=GTH_SGN_U_tom_match_part_46;Target=SGN-U320774 59 190 +;Parent=SGN-U320774_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	82456	82502	1.000	+	0	ID=GTH_SGN_U_tom_match_part_47;Target=SGN-U320774 191 237 +;Parent=SGN-U320774_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	83465	83527	1.000	+	0	ID=GTH_SGN_U_tom_match_part_48;Target=SGN-U320774 238 300 +;Parent=SGN-U320774_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	83625	83733	1.000	+	0	ID=GTH_SGN_U_tom_match_part_49;Target=SGN-U320774 301 409 +;Parent=SGN-U320774_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	83822	83908	1.000	+	0	ID=GTH_SGN_U_tom_match_part_50;Target=SGN-U320774 410 496 +;Parent=SGN-U320774_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match	87341	90080	1.000	-	0	ID=SGN-U314415_alignment_1;Target=SGN-U314415 1 782 +
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	90041	90080	1.000	-	0	ID=GTH_SGN_U_tom_match_part_51;Target=SGN-U314415 1 40 +;Parent=SGN-U314415_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	88996	89104	1.000	-	0	ID=GTH_SGN_U_tom_match_part_52;Target=SGN-U314415 41 149 +;Parent=SGN-U314415_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	88614	88691	1.000	-	0	ID=GTH_SGN_U_tom_match_part_53;Target=SGN-U314415 150 227 +;Parent=SGN-U314415_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	88469	88502	1.000	-	0	ID=GTH_SGN_U_tom_match_part_54;Target=SGN-U314415 228 261 +;Parent=SGN-U314415_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	88300	88368	1.000	-	0	ID=GTH_SGN_U_tom_match_part_55;Target=SGN-U314415 262 330 +;Parent=SGN-U314415_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	87341	87792	1.000	-	0	ID=GTH_SGN_U_tom_match_part_56;Target=SGN-U314415 331 782 +;Parent=SGN-U314415_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match	90578	93970	1.000	+	0	ID=SGN-U320773_alignment_1;Target=SGN-U320773 1 948 +
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	90578	90703	1.000	+	0	ID=GTH_SGN_U_tom_match_part_57;Target=SGN-U320773 1 126 +;Parent=SGN-U320773_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	91415	91546	1.000	+	0	ID=GTH_SGN_U_tom_match_part_58;Target=SGN-U320773 127 258 +;Parent=SGN-U320773_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	91625	91671	1.000	+	0	ID=GTH_SGN_U_tom_match_part_59;Target=SGN-U320773 259 305 +;Parent=SGN-U320773_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	92731	92793	1.000	+	0	ID=GTH_SGN_U_tom_match_part_60;Target=SGN-U320773 306 368 +;Parent=SGN-U320773_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	92889	92997	1.000	+	0	ID=GTH_SGN_U_tom_match_part_61;Target=SGN-U320773 369 477 +;Parent=SGN-U320773_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	93092	93465	1.000	+	0	ID=GTH_SGN_U_tom_match_part_62;Target=SGN-U320773 478 851 +;Parent=SGN-U320773_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	93874	93970	1.000	+	0	ID=GTH_SGN_U_tom_match_part_63;Target=SGN-U320773 852 948 +;Parent=SGN-U320773_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match	93899	95293	1.000	+	0	ID=SGN-U314629_alignment_1;Target=SGN-U314629 1 645 -
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	93899	93978	1.000	+	0	ID=GTH_SGN_U_tom_match_part_64;Target=SGN-U314629 1 80 -;Parent=SGN-U314629_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	94074	94411	1.000	+	0	ID=GTH_SGN_U_tom_match_part_65;Target=SGN-U314629 81 418 -;Parent=SGN-U314629_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	95067	95293	1.000	+	0	ID=GTH_SGN_U_tom_match_part_66;Target=SGN-U314629 419 645 -;Parent=SGN-U314629_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match	101508	104514	1.000	+	0	ID=SGN-U327224_alignment_1;Target=SGN-U327224 1 1777 +
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	101508	101892	1.000	+	0	ID=GTH_SGN_U_tom_match_part_67;Target=SGN-U327224 1 385 +;Parent=SGN-U327224_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	102997	103897	1.000	+	0	ID=GTH_SGN_U_tom_match_part_68;Target=SGN-U327224 386 1286 +;Parent=SGN-U327224_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	104024	104514	1.000	+	0	ID=GTH_SGN_U_tom_match_part_69;Target=SGN-U327224 1287 1777 +;Parent=SGN-U327224_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match	117543	117966	0.965	-	0	ID=SGN-U338087_alignment_1;Target=SGN-U338087 2 425 +
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	117543	117966	0.965	-	0	ID=GTH_SGN_U_tom_match_part_70;Target=SGN-U338087 2 425 +;Parent=SGN-U338087_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match	123116	129172	1.000	+	0	ID=SGN-U313505_alignment_1;Target=SGN-U313505 1 1102 +
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	123116	123481	1.000	+	0	ID=GTH_SGN_U_tom_match_part_71;Target=SGN-U313505 1 366 +;Parent=SGN-U313505_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	125745	125864	1.000	+	0	ID=GTH_SGN_U_tom_match_part_72;Target=SGN-U313505 367 486 +;Parent=SGN-U313505_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	126288	126420	1.000	+	0	ID=GTH_SGN_U_tom_match_part_73;Target=SGN-U313505 487 619 +;Parent=SGN-U313505_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	128002	128050	1.000	+	0	ID=GTH_SGN_U_tom_match_part_74;Target=SGN-U313505 620 668 +;Parent=SGN-U313505_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	128166	128241	1.000	+	0	ID=GTH_SGN_U_tom_match_part_75;Target=SGN-U313505 669 744 +;Parent=SGN-U313505_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	128815	129172	1.000	+	0	ID=GTH_SGN_U_tom_match_part_76;Target=SGN-U313505 745 1102 +;Parent=SGN-U313505_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match	123258	128889	0.941	+	0	ID=SGN-U313506_alignment_1;Target=SGN-U313506 1 687 +
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	123258	123481	0.857	+	0	ID=GTH_SGN_U_tom_match_part_77;Target=SGN-U313506 1 233 +;Parent=SGN-U313506_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	125745	125864	1.000	+	0	ID=GTH_SGN_U_tom_match_part_78;Target=SGN-U313506 234 353 +;Parent=SGN-U313506_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	126288	126420	0.977	+	0	ID=GTH_SGN_U_tom_match_part_79;Target=SGN-U313506 354 487 +;Parent=SGN-U313506_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	128002	128050	0.898	+	0	ID=GTH_SGN_U_tom_match_part_80;Target=SGN-U313506 488 536 +;Parent=SGN-U313506_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	128166	128241	1.000	+	0	ID=GTH_SGN_U_tom_match_part_81;Target=SGN-U313506 537 612 +;Parent=SGN-U313506_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	match_part	128815	128889	0.973	+	0	ID=GTH_SGN_U_tom_match_part_82;Target=SGN-U313506 613 687 +;Parent=SGN-U313506_alignment_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	gene	760	6607	.	-	0	ID=GTH_SGN_U_tom_gene_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	mRNA	760	6607	.	-	0	ID=GTH_SGN_U_tom_gene_1_AGS_1;Parent=GTH_SGN_U_tom_gene_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	6473	6607	0.970	-	0	ID=GTH_SGN_U_tom_exon_1;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	6202	6393	1.000	-	0	ID=GTH_SGN_U_tom_exon_2;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	5936	6119	1.000	-	0	ID=GTH_SGN_U_tom_exon_3;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	5786	5856	1.000	-	0	ID=GTH_SGN_U_tom_exon_4;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	5560	5711	1.000	-	0	ID=GTH_SGN_U_tom_exon_5;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	4123	4291	0.976	-	0	ID=GTH_SGN_U_tom_exon_6;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	3875	4021	1.000	-	0	ID=GTH_SGN_U_tom_exon_7;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	1763	1855	0.989	-	0	ID=GTH_SGN_U_tom_exon_8;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	1376	1550	1.000	-	0	ID=GTH_SGN_U_tom_exon_9;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	1104	1293	1.000	-	0	ID=GTH_SGN_U_tom_exon_10;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	760	1010	0.992	-	0	ID=GTH_SGN_U_tom_exon_11;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	gene	23208	25228	.	-	0	ID=GTH_SGN_U_tom_gene_2
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	mRNA	23208	25228	.	-	0	ID=GTH_SGN_U_tom_gene_2_AGS_1;Parent=GTH_SGN_U_tom_gene_2
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	25095	25228	0.940	-	0	ID=GTH_SGN_U_tom_exon_12;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	24890	24990	1.000	-	0	ID=GTH_SGN_U_tom_exon_13;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	23792	23936	0.986	-	0	ID=GTH_SGN_U_tom_exon_14;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	23628	23717	1.000	-	0	ID=GTH_SGN_U_tom_exon_15;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	23208	23542	0.997	-	0	ID=GTH_SGN_U_tom_exon_16;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	gene	26675	28514	.	-	0	ID=GTH_SGN_U_tom_gene_3
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	mRNA	26675	28514	.	-	0	ID=GTH_SGN_U_tom_gene_3_AGS_1;Parent=GTH_SGN_U_tom_gene_3
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	28200	28514	1.000	-	0	ID=GTH_SGN_U_tom_exon_17;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	27111	27255	1.000	-	0	ID=GTH_SGN_U_tom_exon_18;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	26945	27034	1.000	-	0	ID=GTH_SGN_U_tom_exon_19;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	26675	26859	0.962	-	0	ID=GTH_SGN_U_tom_exon_20;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	gene	29341	29518	.	+	0	ID=GTH_SGN_U_tom_gene_4
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	mRNA	29341	29518	.	+	0	ID=GTH_SGN_U_tom_gene_4_AGS_1;Parent=GTH_SGN_U_tom_gene_4
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	29341	29518	0.910	+	0	ID=GTH_SGN_U_tom_exon_21;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	gene	31413	32034	.	-	0	ID=GTH_SGN_U_tom_gene_5
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	mRNA	31413	32034	.	-	0	ID=GTH_SGN_U_tom_gene_5_AGS_1;Parent=GTH_SGN_U_tom_gene_5
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	31413	32034	0.997	-	0	ID=GTH_SGN_U_tom_exon_22;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	gene	64984	65653	.	+	0	ID=GTH_SGN_U_tom_gene_6
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	mRNA	64984	65653	.	+	0	ID=GTH_SGN_U_tom_gene_6_AGS_1;Parent=GTH_SGN_U_tom_gene_6
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	64984	65653	1.000	+	0	ID=GTH_SGN_U_tom_exon_23;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	gene	65745	66445	.	-	0	ID=GTH_SGN_U_tom_gene_7
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	mRNA	65745	66445	.	-	0	ID=GTH_SGN_U_tom_gene_7_AGS_1;Parent=GTH_SGN_U_tom_gene_7
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	65745	66445	0.994	-	0	ID=GTH_SGN_U_tom_exon_24;Parent=GTH_SGN_U_tom_gene_7_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	gene	68710	77257	.	+	0	ID=GTH_SGN_U_tom_gene_8
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	mRNA	68710	77257	.	+	0	ID=GTH_SGN_U_tom_gene_8_AGS_1;Parent=GTH_SGN_U_tom_gene_8
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	68710	69089	0.971	+	0	ID=GTH_SGN_U_tom_exon_25;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	69626	69856	0.991	+	0	ID=GTH_SGN_U_tom_exon_26;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	70413	70469	1.000	+	0	ID=GTH_SGN_U_tom_exon_27;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	70558	70686	0.992	+	0	ID=GTH_SGN_U_tom_exon_28;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	71196	71273	1.000	+	0	ID=GTH_SGN_U_tom_exon_29;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	71390	71460	0.986	+	0	ID=GTH_SGN_U_tom_exon_30;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	71575	71618	1.000	+	0	ID=GTH_SGN_U_tom_exon_31;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	71710	71917	1.000	+	0	ID=GTH_SGN_U_tom_exon_32;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	73214	73775	1.000	+	0	ID=GTH_SGN_U_tom_exon_33;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	75961	76104	1.000	+	0	ID=GTH_SGN_U_tom_exon_34;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	76841	77257	0.998	+	0	ID=GTH_SGN_U_tom_exon_35;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	gene	77807	78239	.	-	0	ID=GTH_SGN_U_tom_gene_9
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	mRNA	77807	78239	.	-	0	ID=GTH_SGN_U_tom_gene_9_AGS_1;Parent=GTH_SGN_U_tom_gene_9
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	77807	78239	1.000	-	0	ID=GTH_SGN_U_tom_exon_36;Parent=GTH_SGN_U_tom_gene_9_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	gene	81466	83908	.	+	0	ID=GTH_SGN_U_tom_gene_10
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	mRNA	81466	83908	.	+	0	ID=GTH_SGN_U_tom_gene_10_AGS_1;Parent=GTH_SGN_U_tom_gene_10
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	81466	81523	0.914	+	0	ID=GTH_SGN_U_tom_exon_37;Parent=GTH_SGN_U_tom_gene_10_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	82243	82374	1.000	+	0	ID=GTH_SGN_U_tom_exon_38;Parent=GTH_SGN_U_tom_gene_10_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	82456	82502	1.000	+	0	ID=GTH_SGN_U_tom_exon_39;Parent=GTH_SGN_U_tom_gene_10_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	83465	83527	1.000	+	0	ID=GTH_SGN_U_tom_exon_40;Parent=GTH_SGN_U_tom_gene_10_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	83625	83733	1.000	+	0	ID=GTH_SGN_U_tom_exon_41;Parent=GTH_SGN_U_tom_gene_10_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	83822	83908	1.000	+	0	ID=GTH_SGN_U_tom_exon_42;Parent=GTH_SGN_U_tom_gene_10_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	gene	87341	90080	.	-	0	ID=GTH_SGN_U_tom_gene_11
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	mRNA	87341	90080	.	-	0	ID=GTH_SGN_U_tom_gene_11_AGS_1;Parent=GTH_SGN_U_tom_gene_11
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	90041	90080	1.000	-	0	ID=GTH_SGN_U_tom_exon_43;Parent=GTH_SGN_U_tom_gene_11_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	88996	89104	1.000	-	0	ID=GTH_SGN_U_tom_exon_44;Parent=GTH_SGN_U_tom_gene_11_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	88614	88691	1.000	-	0	ID=GTH_SGN_U_tom_exon_45;Parent=GTH_SGN_U_tom_gene_11_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	88469	88502	1.000	-	0	ID=GTH_SGN_U_tom_exon_46;Parent=GTH_SGN_U_tom_gene_11_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	88300	88368	1.000	-	0	ID=GTH_SGN_U_tom_exon_47;Parent=GTH_SGN_U_tom_gene_11_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	87341	87792	1.000	-	0	ID=GTH_SGN_U_tom_exon_48;Parent=GTH_SGN_U_tom_gene_11_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	gene	90578	95293	.	+	0	ID=GTH_SGN_U_tom_gene_12
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	mRNA	90578	95293	.	+	0	ID=GTH_SGN_U_tom_gene_12_AGS_1;Parent=GTH_SGN_U_tom_gene_12
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	90578	90703	1.000	+	0	ID=GTH_SGN_U_tom_exon_49;Parent=GTH_SGN_U_tom_gene_12_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	91415	91546	1.000	+	0	ID=GTH_SGN_U_tom_exon_50;Parent=GTH_SGN_U_tom_gene_12_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	91625	91671	1.000	+	0	ID=GTH_SGN_U_tom_exon_51;Parent=GTH_SGN_U_tom_gene_12_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	92731	92793	1.000	+	0	ID=GTH_SGN_U_tom_exon_52;Parent=GTH_SGN_U_tom_gene_12_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	92889	92997	1.000	+	0	ID=GTH_SGN_U_tom_exon_53;Parent=GTH_SGN_U_tom_gene_12_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	93092	93465	1.000	+	0	ID=GTH_SGN_U_tom_exon_54;Parent=GTH_SGN_U_tom_gene_12_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	93874	93978	1.000	+	0	ID=GTH_SGN_U_tom_exon_55;Parent=GTH_SGN_U_tom_gene_12_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	94074	94411	1.000	+	0	ID=GTH_SGN_U_tom_exon_56;Parent=GTH_SGN_U_tom_gene_12_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	95067	95293	1.000	+	0	ID=GTH_SGN_U_tom_exon_57;Parent=GTH_SGN_U_tom_gene_12_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	gene	101508	104514	.	+	0	ID=GTH_SGN_U_tom_gene_13
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	mRNA	101508	104514	.	+	0	ID=GTH_SGN_U_tom_gene_13_AGS_1;Parent=GTH_SGN_U_tom_gene_13
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	101508	101892	1.000	+	0	ID=GTH_SGN_U_tom_exon_58;Parent=GTH_SGN_U_tom_gene_13_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	102997	103897	1.000	+	0	ID=GTH_SGN_U_tom_exon_59;Parent=GTH_SGN_U_tom_gene_13_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	104024	104514	1.000	+	0	ID=GTH_SGN_U_tom_exon_60;Parent=GTH_SGN_U_tom_gene_13_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	gene	117543	117966	.	-	0	ID=GTH_SGN_U_tom_gene_14
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	mRNA	117543	117966	.	-	0	ID=GTH_SGN_U_tom_gene_14_AGS_1;Parent=GTH_SGN_U_tom_gene_14
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	117543	117966	0.965	-	0	ID=GTH_SGN_U_tom_exon_61;Parent=GTH_SGN_U_tom_gene_14_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	gene	123116	129172	.	+	0	ID=GTH_SGN_U_tom_gene_15
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	mRNA	123116	129172	.	+	0	ID=GTH_SGN_U_tom_gene_15_AGS_1;Parent=GTH_SGN_U_tom_gene_15
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	123116	123481	1.000	+	0	ID=GTH_SGN_U_tom_exon_62;Parent=GTH_SGN_U_tom_gene_15_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	125745	125864	1.000	+	0	ID=GTH_SGN_U_tom_exon_63;Parent=GTH_SGN_U_tom_gene_15_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	126288	126420	1.000	+	0	ID=GTH_SGN_U_tom_exon_64;Parent=GTH_SGN_U_tom_gene_15_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	128002	128050	1.000	+	0	ID=GTH_SGN_U_tom_exon_65;Parent=GTH_SGN_U_tom_gene_15_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	128166	128241	1.000	+	0	ID=GTH_SGN_U_tom_exon_66;Parent=GTH_SGN_U_tom_gene_15_AGS_1
C06HBa0055E14.1	GenomeThreader_SGN_U_tomato	exon	128815	129172	1.000	+	0	ID=GTH_SGN_U_tom_exon_67;Parent=GTH_SGN_U_tom_gene_15_AGS_1