<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 05:44:57"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06HBa0059D21-oytiE/GenomeThreader_SGN_markers/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06HBa0059D21-oytiE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0059D21-oytiE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M7366" ref_strand="+" ref_description="SGN-M7366 C2_At2g31440 [cosii_markers]">
      <seq>gaggctggaggatatattggatgcatttgctgacagagtctctaaacctcgcctctttatgacggacaagatgcaaattgctcttgctgggggtttgggacatggtgtggctcatgctgtgtttttctgccttggccttttgacacctgcatttggaccagcgacatactatgtagagaaatgctcaaagatacccttttttcttgtttctgcaattatagcccttgcctttgctaccattcacactttctccatggttattgcgttcagtggatatgaagaaggaaacaaagtggaccagtgttttgctcctgttgttcacttaattgctggcatgttgacactgacgaatcttgcatttggaggctgcatgattggcattccacttctctattgtgtagcaatcgtgaccttggtacattgcggaaagatggcatggaggagattgatagaaagccgaagcagggagggaaacttcagcaatagccagtaagcaaggataataacctttttcgttatgactgagaagtgtaagataagtaattgccagatatgtctgatgcatggagcatttgtcaagggtgactcaaaggagagactagtaaaagccttcgctttaggcctccaaaaataattcatagtcgactttatattggccaaatacatatacagccactcaaactttacaggaattttcattgtaacacctaacatttgccttgtacctattgaacacctaatgttgcaaaaatttgtgtctattcaacactcgtac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0059D21-oytiE/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C06HBa0059D21.1" temp_strand="-" temp_description="C06HBa0059D21.1  AC209508.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0059D21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="10778" stop="6514"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10478" g_stop="10393" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10392" i_stop="8794" i_length="1599">
            <donor d_prob="0.968" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8793" g_stop="8668" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="212" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="8667" i_stop="7898" i_length="770">
            <donor d_prob="0.838" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="7897" g_stop="7770" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="213" r_stop="340" r_length="128" r_score="0.969"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="7769" i_stop="7248" i_length="522">
            <donor d_prob="0.930" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7247" g_stop="6814" g_length="434"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="775" r_length="435" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0059D21.1" gen_strand="-" ref_id="SGN-M7366" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>774</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0059D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-M7366" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10478" e_stop="10393"/>
          <exon e_start="8793" e_stop="8668"/>
          <exon e_start="7897" e_stop="7770"/>
          <exon e_start="7247" e_stop="6814"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCTGGAGGATTTATTGGATGCGTTTGCTGACAGAGTCTCTAAACCTCGCCTCTTTATGACAGACAAGATGCAAATTGCTCTTGGTAGAATACTGAACATTTTCGCTACATGTCTTGTAAATTCTAGTATTTAGTTTTGATACTTTTTCTATCTCCCCTAGAATTTTTTTTTTTTTTATAATTTTCTTTTTTTCACTAAGGTACCTAAATGGGGAGGCTAGGGAAAATGAGTGTGGAAGACTTGTCACAATGATCTGAAAACCCCTAGGGCCTAACCTTAACCCAACCCAATAAGCGGGAAAATAAAAAGGTGGAAGCAGCTCGCCTACCCATTGAGGGTGTACCTTTTTGTTGCAAAACATGTTACATTTTAGTTTCAGAGCATGCAACAGTGCAGCAAGCTCGTACTATATATATATATATATATTGGTCCAACAAGACAGCAATTCTTAGATCGAAAACAATAAAAGAGAAGAGATGAGATTGTAGAGAGAACATAGATACTTCCAGGGGTAGGTACAACCATTGGAGCTGCAGCTGCTATTGCGTATTAGTCGTTGGGTGCTTCTAAGATTTCACTGTTGGCGACATATTTTAGCATTAAAAATGAAATTGTTGATATCATATAACTGAAGATCCCATAGCACCATGCAACTTCTAAACCTTCTTTTCAGCTCTGCACTTAACCAATTGATCTTCTCCAGTGGAAACAGAATTGAACAAGAAAAACCTCAGCATATTTAACGGAAGCTAAAAAGGAACTTGCTAATAACTGATGCATCACTTATGCAACTTTTAGGTCTAATTGATTGACAAGTTAAGAACAATTTCCTAATAACAAAATCATCTTGATGGTTTCTGATGTTGTACAGATAAAAGGATTCTAATAATATCATGAAAACACGTCCGACCATAGGAAACTTGAAGATGCTATTAGTTGCACTCTCTCTATTGGACTGATGCAATTGAAGTTCTGTTTAGATATAGGCAGGCAAAGTGGGACTTAGTAGCTGAGATTGATGTGCTGGTTTCATTTAACCGAGTGTTAAATGGACCGAGAGACTGTCAGTTGGAAAGGAGTTGAAAGTTGAAGGAGGACAGTAAGGGATTAGGTTATTGATTGAGGAAAGGCATGTTCAATGAGATTGGGATGGAAAACGCTAGCTTTTAGAGTTTAGATGACTGAGGTTTAAGTTTTAACTGCTCTTTCTTTTTTCTGAAGGTTTAGATGTTGCTAATCTGATACTTCTATAAGCTACTTCTACTAGATGGTATCAAGTATTGGAGTGTGAAAATAAAAAGATAAAGGAGTTATCTTAAAAACTATTCTGCAGTTTTCTCTATTTATACAACCCTCTTTGCCGTTTAAATTGGCAATAGATGTTCTATTAATTAGAATAAGCATTTTTAAGGGCCATTATTGTTCAATATGATTCTGAATCCGCTGAGATGTCGAAAATCATGCTGCACCCCGTGATGTTAATTGCTTGTGGCCGCTTTATCTGGGATACTATTACTGTTTGTACCCCTTTCCAGCTCCAAGTTGTTTCAACTTTCGAATATTCTTTTGATCTTTCCATTTATGGTGAAGGCAAACTACCTTACTGCTATTAGATATCTAGTGTAGTTTCTGATATTCTATTTGTTATCTGACACTAACATCTGATATGAGTTGACATGCAGCTGGGGGTTTGGGACATGGTGTGGCTCATGCTGTGTTTTTCTGCCTTGGCCTTTTGACACCTGCATTTGGACCAGCGACATACTATGTAGAGAAATGCTCAAAGATACCCTTTTTTCTTGTTTCTGGTAAGGGAATTCTGCTATTTCTGAGTTCCTCTTTTATTCTTTTGGAATTAGCTTCTGAGTACCTTGTATTATTGATCTTCAGCAAACTCTATATTTGAAAGATCTTCAGAACCAAAGTTTAAAGCAGTGAATGGAGTAACTTAGGACCATTATAAACTTCTTTGGATATCCTTACACAACTAATGAGGGACAATTGTTATCTTTAACCCTCCCGTCCCCCCGTCCCCCCCCCCCCCTTCCCAAACACACACACACACACACTCACACTCGTGTAACCCGGTTCTAGAGCATACACGTGGACTTTAACATTTTTTTTAATTCCATGTTCTTTTTTAAATAGATTAAATAGTGGGTTTATAGTAGAGAAAGACTAGTCTCAACAAGTTGAAGAGTGTCCCGGAGCATAGAGATAAAGAGAGAGTAGGCTCAACAGGCTAAAGAGTGGAAATGGAGTAGGGAGATAGTGAGAGAATAGGCTGAAGATTCAATCAAGAGAAGTGAGTGACTCAACACACTATATTGGGATAGAGAAGCCTAGAGGTGCTTGATGGCCTAAGTTGAGATATAAAACCCTACAGAGATAAAAACAAGTAGGGATGAAGTATGTGTGATGGCGAGCTTACCTAAAATTTTGGGTTCCCTTTTCTTGGGGCTGCAACTATGGTTTTAACTTAGAAAAATAGTGTAAAGTATAGTGCATGTTGCCATAGTATTGCTTACTACCTCCATATTTATGCAGTCTTAACACTATTTGGCATTTTAAATTGCAGCTATTATAGCCCTTGCCTTTGCTACCATCCACACTTTCTCCATGGTTATTGCATTCAGTGGATATGAAGAAGGAAACAAAGTGGACCAGTGTTTCGCTCCTGTTGTTCACTTAATTGCTGGCATGTTGGTAAGTATCCACATAATTGTGTATGCATACTTGAAGAGTGCAAACTAAACCTGTCGAGCAAACCAACTACTAAACTGAATGATACTACAGATCTTGTAACCGAAACTTTCCTAAATAGATCTGCTAGTTTTTTGGAGGGCTCTAGCATGAAATCAATATAGAAGCAGATAGTTTTAGCATTTGGTGTGGCTTCTGAATTATTTTGGATTAAAATGTACAAAGTCAATCATAACAGGTTACTTACATTCTTGGTTACCGAGAGTTATAGCTTCTACGTTTTTGATGCGCGAATATCTATAGTACAGGATCTCCAAAGAGGTCCATTTCTTCTTATTTCCTTGAAATCAGTGACTTGACCCATACTATTCAATGTCACTTGCTGATTTCATCTAATGTAGCACAGTTGATCGAGTTTATCAATCGTGCTTCCCTCTGTAGATTTACTATTTCGATGAAAAACTCGAGCAATGTGAGTGCATTTTTTGATTAAATGACGATTGATGATCTCTGGTTTGTTTTCAGACACTGACGAATCTTGCATTTGGAGGCTGCATGATTGGCATTCCACTCCTCTATTGTGTAGCAATCGTGACCTTGGTACATTGCGGAAAGATGGCATGGAGGAGATTGATAGAAAGCCGAAACAGGGAGGGGAACTTCAGCAATAGCCAATAAGCAAGGATAATAACCTTTTTTG-TATTACTGAGAAGTGTAAGATTAGTAATTGCCAGATATATCTAATGCTTGGAGCATTTGCCAAGGGTGACTCAAAGAAGAGACTAGT-AAATCTTTTGTTTTAGGCCTCCAAAAATATTTCATAGTCAACTTTATATTGGCCAAATAAATATTCGGGCCACTCAAACTTTACATGAATTTTCGTTGTAACACCTAACATTTGCCTTGTACCTATTGAACACCTAATATTACAAGAATTTATGTCTATTCAATAATCGTAC</genome_strand>
        <mrna_strand>GAGGCTGGAGGATATATTGGATGCATTTGCTGACAGAGTCTCTAAACCTCGCCTCTTTATGACGGACAAGATGCAAATTGCTCTTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGGGTTTGGGACATGGTGTGGCTCATGCTGTGTTTTTCTGCCTTGGCCTTTTGACACCTGCATTTGGACCAGCGACATACTATGTAGAGAAATGCTCAAAGATACCCTTTTTTCTTGTTTCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTATAGCCCTTGCCTTTGCTACCATTCACACTTTCTCCATGGTTATTGCGTTCAGTGGATATGAAGAAGGAAACAAAGTGGACCAGTGTTTTGCTCCTGTTGTTCACTTAATTGCTGGCATGTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTGACGAATCTTGCATTTGGAGGCTGCATGATTGGCATTCCACTTCTCTATTGTGTAGCAATCGTGACCTTGGTACATTGCGGAAAGATGGCATGGAGGAGATTGATAGAAAGCCGAAGCAGGGAGGGAAACTTCAGCAATAGCCAGTAAGCAAGGATAATAACCTTTTTCGTTATGACTGAGAAGTGTAAGATAAGTAATTGCCAGATATGTCTGATGCATGGAGCATTTGTCAAGGGTGACTCAAAGGAGAGACTAGTAAAAGCCTTCGCTTTAGGCCTCCAAAAATAATTCATAGTCGACTTTATATTGGCCAAATACATATAC-AGCCACTCAAACTTTACAGGAATTTTCATTGTAACACCTAACATTTGCCTTGTACCTATTGAACACCTAATGTTGCAAAAATTTGTGTCTATTCAACACTCGTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0059D21-oytiE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M7703-3" ref_strand="+" ref_description="SGN-M7703-3 C2_At3g11710-3 [cosii_markers]">
      <seq>ctcaaatacgctaaaaccctagcctccatatccatttctctttcagctctacactctgcatctgtttttacagttacacttgcataaaaaaattgtcggctgctccggtcgccgccgtcaacaatggggaaatcagaaaaaaaaccagcctctcagccccagaaaccagaaaagaagccagccgctcagtcacagaagaattctgcagccgatgatgacatggatccaacgcaatactttgaaaataggctgaaagcacttgcagctgagaaggaaaatgggcagaacccttacccacacaaattccaaggggaaaaccatttgtctatccctaaatttgtcaataaatacggagttttagagagtggagttcattccgaagatgaagtgtccttgactggaaggataatgaacaaacgtgcctcttctgcaaagctgcttttctatgatttacatggtgaaggtgccaaagttcaagtcatgacaagtgcaagagattctgtgttgaatgaagaagacttcattaaatttcattctggtgtgaagcgtggcgatattgttggaattactggatgtccaggtaagagtaaaaggggagagctgagtatttttcccaaatcattcatagtgttatctcactgtcttcatatgatgccacggcagaaaggtgcccagacagagacaactaagaatcctgaagcatgggtccccggaagtggccgtaatccagattcatatgtgttgaaggatcaggaaacacgatatagacagcgttatttggatttgatgctgaacttagaggtccgccacatatttaagacccgtgcaaagatcataacttttattcgaagctttcttgataaccgcgacttcctagaggtagagacccccatgatgaacatgattgctggtggggcagctgcacgtccatttgtgacccaccacaatgatttgaatatgaggcttttcatgcgtattgctcctgaactatatcttaaagagttagttgttggtggcttggatagtgtctatgagattgggaaacaatttagaaacgagggaattgacttgacgcacaatcctgaattcaccacttgcgagttttatatggcatatgcagattacaatgacttgatggagctaactgaaactatgctaagtgggatggtgaaggaacttacaggtggctatataatcaagtatcatgcgaaagggttggagagtgaccctattgaaattgacttcactcctcccttcagaaggattgatatggtagaggaattggagaagattgcaaacttgaatatacccaaggatctctctagtgatgaaaccaacaaatatctcatagatgcttgtgcaaagtttgagatcagatgtcctccacctctaacaacaactagattacttgataaacttgtgggccactttctggaggggacatgtgttaaccctactttcattatcaaccatccagagataatgagtcctttggcgaagtggcacagatcgaaaccaggcctgacagaacgttttgaactgtttataaacaaacatgaactttgtaatgcatacactgagttgaatgaccctgttgtccaacgccagcgctttgctgatcaactcaaggaccgacaatcaggtgatgatgaagctatggcactggatgagaacttttgcacagctcttgaatatggattacctcctactggtggttggggattgggtattgaccgacttgcaatgttgttgacagattcacaaaacatcaaggaagttctactctttccagccatgaagccacaggatgagccagcttccaaggaaagcaataaaaaacctcaggaggaatctgccaagcctcaggatgaacttacaatgcaagatgtggaaaagcagatttccgacatcaaaatgaactgaatcagatcatagatatattgaacgttgagttcctgctgctcctggagtagcatttttgtgatacctttttttctttttttcttttactatttaattaatggtaattgtctattgttatggcaaatgctatctttaatttgttagtatcagaaactttactcgtatacttatgaatatggttgtatccagtcaaatacttttaagatgtattcatttatgctctctaaaaaaaaaaaaaaaaaaaaatataaaaaaaaatataaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0059D21-oytiE/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C06HBa0059D21.1" temp_strand="+" temp_description="C06HBa0059D21.1  AC209508.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0059D21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="64075" stop="72219"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64375" g_stop="64605" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="231" r_length="231" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64606" i_stop="65163" i_length="558">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65164" g_stop="65332" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="400" r_length="169" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65333" i_stop="65435" i_length="103">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65436" g_stop="65529" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="494" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65530" i_stop="65617" i_length="88">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65618" g_stop="65703" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="495" r_stop="580" r_length="86" r_score="0.977"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65704" i_stop="66776" i_length="1073">
            <donor d_prob="0.549" d_score="0.96"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="66777" g_stop="66886" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="581" r_stop="690" r_length="110" r_score="0.991"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="66887" i_stop="66960" i_length="74">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.983" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="66961" g_stop="67023" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="691" r_stop="753" r_length="63" r_score="0.952"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="67024" i_stop="67147" i_length="124">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="67148" g_stop="67273" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="754" r_stop="879" r_length="126" r_score="0.984"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="67274" i_stop="67373" i_length="100">
            <donor d_prob="0.977" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="67374" g_stop="67656" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="880" r_stop="1162" r_length="283" r_score="0.982"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="67657" i_stop="67766" i_length="110">
            <donor d_prob="0.690" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="67767" g_stop="67863" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1163" r_stop="1259" r_length="97" r_score="0.990"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="67864" i_stop="67940" i_length="77">
            <donor d_prob="0.919" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="67941" g_stop="68097" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="1260" r_stop="1416" r_length="157" r_score="0.975"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="68098" i_stop="68707" i_length="610">
            <donor d_prob="0.647" d_score="1.00"/>
            <acceptor a_prob="0.458" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="68708" g_stop="68851" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1417" r_stop="1560" r_length="144" r_score="0.979"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="68852" i_stop="68943" i_length="92">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="68944" g_stop="69012" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1561" r_stop="1629" r_length="69" r_score="0.971"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="69013" i_stop="69121" i_length="109">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="69122" g_stop="69265" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1630" r_stop="1773" r_length="144" r_score="0.986"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="69266" i_stop="69910" i_length="645">
            <donor d_prob="0.964" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="69911" g_stop="69966" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1774" r_stop="1829" r_length="56" r_score="0.964"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="69967" i_stop="71495" i_length="1529">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.74"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="71496" g_stop="71553" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1830" r_stop="1885" r_length="56" r_score="0.759"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="71554" i_stop="71704" i_length="151">
            <donor d_prob="0.996" d_score="0.82"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="71705" g_stop="71960" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="1886" r_stop="2148" r_length="263" r_score="0.867"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2173" polyA_stop="2183"/>
      <MATCH_line gen_id="C06HBa0059D21.1" gen_strand="+" ref_id="SGN-M7703-3" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>2143</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0059D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-M7703-3" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64375" e_stop="64605"/>
          <exon e_start="65164" e_stop="65332"/>
          <exon e_start="65436" e_stop="65529"/>
          <exon e_start="65618" e_stop="65703"/>
          <exon e_start="66777" e_stop="66886"/>
          <exon e_start="66961" e_stop="67023"/>
          <exon e_start="67148" e_stop="67273"/>
          <exon e_start="67374" e_stop="67656"/>
          <exon e_start="67767" e_stop="67863"/>
          <exon e_start="67941" e_stop="68097"/>
          <exon e_start="68708" e_stop="68851"/>
          <exon e_start="68944" e_stop="69012"/>
          <exon e_start="69122" e_stop="69265"/>
          <exon e_start="69911" e_stop="69966"/>
          <exon e_start="71496" e_stop="71553"/>
          <exon e_start="71705" e_stop="71960"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACAAATACGCTAAAACCCTAGCCTCCATATCCATTTCCCTTTCAGCTCTACACTCTGCCTCTGTTTTTACAGTTACACTTGCATCAACAAATTGTCGGCTGCTCCGGTCGCCGCCGTCAGCAATGGGGAAATCAGAAAAAAAGCCAGCCTCTCAGCCCCAGAAAGTGGAGAAGAAGCCAGCTGCTCAGTCACAGAAGAATTCTGCAGCCGATGATGACATGGATCCAACGGTGACTCTGCTTTTCCCTTTTCTATTTCTTGTTGAAGATTTTTTTTTTGGGTGTAATTAATCAATCATGTGTAAGTGTTAGATTGATAAAGAGCTGGGATAAAATTCTAAAGTTTTTGGGATATTTTTCCGTAAAGGCCCCTTTTCCTCTGTGTAGATGTTTTGGTTTTTTTGGGTGTGGTTAATTTGGTTTAGGTTAGTTTGTATGCTTTTCCGTATGAAATTTTGGGGCATTAAGATAAAGGCGCCAGTTTTTTTTTTCTCTGGTTGTATTTCTCTCTCTCGTCTTCTCGTCAGAGTAATGGGGAAGTCAGAGAGCATTCTGTAGCCGTCTACGAAATGAGTCAAAGTGTGACTCTATACATGTGTATTTCTTCATTTGGTGTAATTTAAGATTTTTTTTGGTGTAATTTACAAGAATGATAAGGGAAAGCTACACTTTTTGCTGATGTTTTCCAGTATAAATAGTTGTGAGTTATGTCCAAGGTTTAAATTGATCAACAGATAGAGAGTTGGCGTAAAAGTAACTTTTTTTGTGACTGGTTTTTCGGGATTGCAGCAATACTTCGAAAATAGGCTGAAAGCACTTGCAGCTGAAAAGGAAAATGGGCAGAACCCTTACCCACACAAATTCCAAGGGGAAAACCATATGTCTATCCCTAAATTTGTCAATAAATACGGAGTTTTAGAGAGTGGAGTTCACTCCGAAGATGAAGTGTCCTTGACTGGTAAATTTTACAGCATTTTGAGCTTACTTTCTTGATCAATTTATTTTTTGCAGTTTTTTGTTAAAAAAAATAAATTTGCATCAATGATTGTTTTTTTCGATAGGAAGGATAATGAACAAACGTGCCTCTTCTGCAAAGCTGCTTTTCTATGATTTACATGGTGAAGGTGCCAAAGTTCAAGTCATGACAAGTGCAAGGTGGTTCTATTACTCTTATCATTTTGTTGTTTGTGAGAAATAGAATTTTCTTTTCATTGAGAATTATTATGTCCTTATATATTTGCAGAGATTCTGTGTTGAATGAAGAAGACTTCATTAAATTTCATTCTGGTGTGAAGCGTGGTGATATTGTAGGAATTACTGGATGTCCAGGTGTGGGATTCTTATTTCCTGTTAGTTTAGTGACAGTTGTTATCTGTGGTAGTGTTGGTCTTGGCGGTGTACAAATAAGTTCTATTAGAAGAGAAATGTTACTCTTAGTCTCACTCCATCACGTACTTGAACACCATTAATTAATGCAGGGGAAAGGAACTGAAAACACAATGTTTATGTATTTTATTGGATTGGTGTACTGCAGCAGATTGAATGGTTAAGATTTGCATGTGAAGTTATGGTCATATTTAATTCCATAACAGCTATTCAGCTATCCAAATGAAAGATTTGACGATTCATGTCTTATCTGGCAGTTAACTGCATTTACCCGACCTTTTCTCTTCACACCACTTACTGCATGGATTCTAATTTAATTCATATTTAAGTTGATCATTTCTTGATCCTCCACTCTGAAGCTTTTATTTGAATTCAAATTTAATTAATAATGTTTTTGACTTTTTTCCCGACCATATAATTTTTTTGAAAGAGGAGGTTGATCAGCTGTTAGAGACGGGATACAGTTAATTGTCTTTTTATATTTGATTTTCAAAAAGTAAAATCTGGAGAATTATTTGACAAAGCAGAAAAATTTTTGAAAAAAAATGGACAACAAATAGAGCAGTGGCATAAGATTCTTATAGAAAATACACAAGTTTCAAGCTCTCATAGTAAGGAAGAGGAATGATAAAAGGCCGGGAATTAGTAAAAATGGAGTTCGAGAGAATAGATGCATGCATTTGTAAGTAGAAAAGAAATTAATTGGCAGGTGCATGAAAGAAAATAATATATACTTATACCATTACATTTATTAGATCATGATTACCAGAGGTGACCTTTGTCAAGCTGTCTCCTAAAGGGGCAGTGGTATCCATGTTTAATACAAAACATGTTCTTCGGTTTGCGTGCATTTTGGCTTCTTGGTTTCGCCATAGTGTCTTACCTCAAGTATTGTGCAATTGACAGGGTGAATATCTTTATTTAGATGGTGTAGTTTATGCAAAGATCTCATGAGATGATAATAGTGATGTTTGGTTTGGTAACATATTTCTAATTCTTCCTACCTCATTCATCAGGTAAGAGTAAAAGGGGAGAGCTGAGTATTTTTCCCAAATCATTCATAGTGTTATCTCACTGTCTTCATATGATGCCACGGCAGAAAGGTGCCCAGACAGAGACAGCTAAGGTCAGCGAATTTTGTTTTGGATGATGTCTAATATCAGTCTCAGTTTGATTGAACTATATCTAATTGTGCTGCAGAATCCTGAAGCATGGGTCCCCGGAAGTGGCCGCAATCCAGATTCGTATGTGTTAAAGGATCAGGTATCTTATGCCTCTCAATTTTTTCAGAATTTTTTTTCTTTATAGTGCCTTACTTTCATCATATTTCCTTTAAAAGATTTTATGCCTCTGATGTGATCTTGTGGTTCATTTGTTCTCTGTCCAGGAAACACGATATAGACAGCGTTATTTGGATTTGATGCTGAACTTAGAGGTCCGCCACATATTTAAAACCCGTGCAAAGATCATAACTTTTATTCGAAGCTTTCTTGATAACCGTGACTTCCTAGAGGTTGGTGTTTATAAAGCTGTTTTACTTTGCCTTTGTTTAGTTGATATTATGATCTTAGCTTGAATATAACTAGTAAAATATATAATTGTATTTGTAACAGGTAGAGACCCCCATGATGAACATGATTGCTGGTGGGGCAGCTGCACGTCCATTTGTGACCCACCACAATGATTTGAATATGAGGCTTTTCATGCGTATTGCTCCTGAACTCTATCTTAAAGAGCTGGTTGTTGGTGGCTTGGATCGTGTCTATGAGATTGGGAAACAATTTAGAAACGAGGGAATTGACTTGACGCACAATCCTGAATTCACCACTTGCGAGTTTTATATGGCATATGCAGATTACAATGACTTGATGGAGCTAACTGAAAATATGCTAAGTGGTAAGTAACCAAAATATTTGGATCCAAATGTTGTGGGGGAAGCTTATGTATATTTAATCTTTTCATGATATTTATTCTTTTATTTTATATTACTGACCATACATGAACAGGGATGGTGAAGGAACTTACAGGTGGCTATATAATCAAGTATCATGCGAAAGGGTTGGAGAGTGACCCAATTGAAATTGACTTCACTCCTCCCTTCAGGTTTGGGAGCTTTTCTGGTTTGTCATGTTTTGGTTTAGTTTACAAGGCACTAAGATACTTATGCGTTGCTTCTGCAGACGGATTGATATGGTAGAGGAATTGGAGAAGATTGCAAACTTGAATATACCCAAGGATCTCTCAAGTGATGAAACCAACAAATATCTCATAGATGCTTGCGCGAAGTTTGAGATCAGATGTCCTCCACCTCTAACAACAACTAGATTACTTGATAAAGTAAATTTTCTTTCAGATATCTTCCGGATAGCCAATTTTTACATATGCAATCTAGTAACTTGCTTTTCCTGCTGATCCCCTTTTCTTTTGTATTGTCGCGCACTACCCTCTAGCGATATTGCAATGTTTGAGAAATTTTTTCAGTTTCTGGGCTTTGTGTTCTTCTGTTCTCTCCATGAGCAGTACTACATGAGGCAACAAAAAGGCTACTGTAAAGAGGAGGGTGGAGGGTAATAGGCAAATGTGAGAAAATAAAGAGGAAAGAAATAGAGATGAATAGGGTTGCTAGCGTTTTAGAGCTATATTAGTGTGAAATCTGTAGTTTGTGTGGCATTTGATCTATAACATGTGTTATTGCCAATAAATCTCATTGTTGATTGTTAAATTGGTTTAGAATCAATTGCTGTTTGTCTGCTTTTCGGCATGTAACATTATAAAATTGTTTAATGTTTGGTCCCATTTCTGCATTTATTGGTGATACCTCTTCAAAAAAACATGTACTAACAGGAATCAAGTGTTCTCATTCCTTTGGTGCTATTGGTAACAGTTTTTTGCCTAAGCAGCTTTATGACGTCGGAACTAAGTCTCCCTTCATTTTCTGTGAATTTAGCTTGTGGGACACTTTCTGGAGGAGACATGTGTTAACCCTACTTTCATTATCAACCATCCAGAGATAATGAGTCCTTTGGCAAAGTGGCACAGATCGAAACCAGGCCTGACAGAACGTTTTGAACTGTTTATAAACAAACATGAAGTATGCATTCTTTCAAATCTTTCAAAGTTCAAACTCTATATTACCATCCCAACACATGTTGTAATGTGCTTCTCTGTTAAATAACTTGACAGCTCTGTAATGCATACACCGAGTTGAATGACCCTGTTGTCCAACGCCAGCGCTTTGCTGATCAACTCAAGGTATTTGTGGGAAGTGTGCAACTTGACTTGGTGGTTGTTTGTGTTCATCTTGTTGTATCATTTCGATTATGTGCAACTACTTATTTAGGCATAATTAATGTCAATTCAGGACCGACAATCAGGTGATGATGAAGCTATGGCACTGGATGAGAACTTTTGCACCGCTCTTGAATATGGATTACCTCCTACTGGTGGTTGGGGATTGGGTATTGACCGACTTGCAATGTTGTTGACAGATTCACAAAACATTAAGGTTTGTGCCTTCACTTATTTAGTGAGGAAGAAATGACCACTTAGTTCCAAATGGCCGAGGGAATGGCCTGTTGTCTTCCTGATTCTTACATTATCTTCATCAATCTTCACCTCATTAGATAGCTTTTGAGGTTAATTTAGGCATTTTCTTAGCATGGTATTAGAGCCAGAGCAAAACTAATCCATGTTCTTGGTTTATCCAATGTTGAGCAATCATGTTGTATTGTCCGTGTTCCAGATGTTTCAACTCCTATGCATCTGGGTTAGTTACCATATCTTACATTTTTTTTTTTAAAAAAAATGGAATGCTGAGTTATACAATTTTAGCAAATTCTTACCTCATGATCTAGCTTTTGGGTTTTTTGTTAGACTCGAGGTTCTTTTATTTTAACTATGATGAAATGACCATTCATTTCCAATCAATTTCTCTGTTGTCCTGTTTGGCATCCATTTCTAAATGGTGGATGGAGGAGGGCATTCATAGAAGAGCCCACAAAGGCTGGTCTTCTACGAATTTAGTGTTGTCTCAGCATTCCCAACTCTCATTTTCTTGTCACTTCCTTTATGAGAAAGCTAGTGTTTCGTATTATTTTAGTTAGATACTGAAATCGATTTTTCTTTCCCTTGTTATACTTTTTTTCTACAGGAAGTTCTTCTCTTTCCAGCCATGAAGCCACAGGATGAGCCAACTTCCAAGGAAAGGTAAAGATTTCCTCCTTTCTTTTCTTTGAGTGATATACACCGTTAGTAGTGTTTGCTGTCAGATGGTTAGGATTAAGGTTTGTCTTGGATTGTGCTGACAGCCAGCTGACTGATTTAGCTGTCCCAAAAAAGGGGGAAAACTAGCGAACTGATTGATCTTCAAATTAATATCTAGTCTTTGTGGGTAGAGTTTGTACTTGGCATCCAAGGGTGTAGCCTAGTGGAAATTTGAAGTGGGTTGACAACCATGTGGTCTCAGCTTCAATTCCCAGAGGAGACCAAAAAAACTAGGTGTTTTTTTTCATCTATCCGGATCTTGATGGATAGGGTCACTTAGTACTTGTGCAATGGCAGAAGTCGGGAAACAGACTATTGCACAACGACTAGGACTCGTGTCGGAAGAGCTTGGAGGTAGCAGTTAATTAGTTGTGGTGCACGCACACTGGCTGGGCACCACAGTTATAAAAAGAGTTACTTTGTACTTGTACTGATGGAGGGATGTATGTCCTCGGTGGAATAGTTGATGAGCATCAAAGCTGCCCTAGACACTACTATCATAAAATAGTAAATAATGTCCATGATAATAAATATTGACTAAGCAGTGGCCTATTTTTGGGGGATATTTTTTAAAACAGTTTACTATGTTCTTCGGTGGGGTTAATCTTGGTTTCTGCTTAGCTGTAGGAAACACATATATTTGCTTGTAAATATGATTTTACGATGTTATCTTTTACCTTAAGATTAAGCTGCCAGTGAGGCCTATGTTTAAACTCTCATACATATTTTTTAAAATTATATTGTGAAGTTGAATCCTTATTTAGCGGAATAATATTGAAAACCAATAAAGAGGAATAGGTGATGCTGCTTTGCTAGCTGAATTGTGATTAGTAGCACATGTTTTGAAAGAAGCTTGAGAATATTTCTTAAAAGAGTGGGTTACATGATTTGCATTGTTAACTGGGAAGGGATTAGTGGAAAATTTTACGTCTTTTACATGGAATAAATTGGATAATGCCCAGAATTGTGGTTGGGTGTTTGCTTGGCCTGGAGTGAGAGCTGTATAAGAAAAGCCTATAAAAATCCAAAGTGCCCGTGCCCCGTGTTGCGCAGTTCAGAGTACCTGTTTCTTCTTTGCAGCACGATTCAAGCTACAAAATCCTTTATTTCCTTATATAATACTGGATGATTGGGAAAGAACAAAATAGGTGGTATTTTGCAGGGGTTGCTTTTTCAAGACATAGTCTAAGTTAACTTGCTGTTACCTTGTTTTTTTAAAAAAGTTAAAAGTCTGTTACCTTGGTATTCTTGGTGGAAAGTAGAATAAACATGAACTTAAGACGGATTTCACAGGGTTTTCTAAGTCTGTTGCATCTGTGGAAAAGGATATTGTTTTCGTCATTCTACGGTCTAAAAAGCAGATGCTGCAAAAATGAAAGCTTTCATGTGCTTTTCCTTTCAAGCTATTTGAGAAAATACATCACACTTATCATTGAGCTCTCTTTTCTGCATTCAGCAATAAAAAACCTCAGGAGGAAGCCAAGCCTCAGGATGGACAAGCCAAACCTCAGGATGAACTTACAATGAAAGGTAGATAAATCTGGAAGATATGCCTGACCTTTTATTTTCTTCTACTGTCCGAGCATTTTCATTTTTGCCTCTGTTTGTAAACAAAGCTTAGTTCTATTGATATTTGTCTTTGGGGGAGAACTGCCTCTTACTTGTTTTTACATTGCTACAGATGTGGAAAAGCAGATTTCCGACATCAAAATGAACTGAATCAGATCATAGATATATTG-ACGCGGAGTTCCTGCTGCTCCAGGAGTACCATTTTTGTTATACC------T-TTTTTTTCTTTTACTATTTGATTAATGGTAATTGTCTATTGTAATGGCAAATGCTGTCTTTAATTCGTTAGTATCAGAAACTTTACTCGTATACTTATGAATATGGTTGTAT-TTGTCAAAATACTTTT-AGATGTATTCATGATTATGCTCTCT</genome_strand>
        <mrna_strand>CTCAAATACGCTAAAACCCTAGCCTCCATATCCATTTCTCTTTCAGCTCTACACTCTGCATCTGTTTTTACAGTTACACTTGCATAAAAAAATTGTCGGCTGCTCCGGTCGCCGCCGTCAACAATGGGGAAATCAGAAAAAAAACCAGCCTCTCAGCCCCAGAAACCAGAAAAGAAGCCAGCCGCTCAGTCACAGAAGAATTCTGCAGCCGATGATGACATGGATCCAACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATACTTTGAAAATAGGCTGAAAGCACTTGCAGCTGAGAAGGAAAATGGGCAGAACCCTTACCCACACAAATTCCAAGGGGAAAACCATTTGTCTATCCCTAAATTTGTCAATAAATACGGAGTTTTAGAGAGTGGAGTTCATTCCGAAGATGAAGTGTCCTTGACTG.......................................................................................................GAAGGATAATGAACAAACGTGCCTCTTCTGCAAAGCTGCTTTTCTATGATTTACATGGTGAAGGTGCCAAAGTTCAAGTCATGACAAGTGCAAG........................................................................................AGATTCTGTGTTGAATGAAGAAGACTTCATTAAATTTCATTCTGGTGTGAAGCGTGGCGATATTGTTGGAATTACTGGATGTCCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGAGTAAAAGGGGAGAGCTGAGTATTTTTCCCAAATCATTCATAGTGTTATCTCACTGTCTTCATATGATGCCACGGCAGAAAGGTGCCCAGACAGAGACAACTAAG..........................................................................AATCCTGAAGCATGGGTCCCCGGAAGTGGCCGTAATCCAGATTCATATGTGTTGAAGGATCAG............................................................................................................................GAAACACGATATAGACAGCGTTATTTGGATTTGATGCTGAACTTAGAGGTCCGCCACATATTTAAGACCCGTGCAAAGATCATAACTTTTATTCGAAGCTTTCTTGATAACCGCGACTTCCTAGAG....................................................................................................GTAGAGACCCCCATGATGAACATGATTGCTGGTGGGGCAGCTGCACGTCCATTTGTGACCCACCACAATGATTTGAATATGAGGCTTTTCATGCGTATTGCTCCTGAACTATATCTTAAAGAGTTAGTTGTTGGTGGCTTGGATAGTGTCTATGAGATTGGGAAACAATTTAGAAACGAGGGAATTGACTTGACGCACAATCCTGAATTCACCACTTGCGAGTTTTATATGGCATATGCAGATTACAATGACTTGATGGAGCTAACTGAAACTATGCTAAGTG..............................................................................................................GGATGGTGAAGGAACTTACAGGTGGCTATATAATCAAGTATCATGCGAAAGGGTTGGAGAGTGACCCTATTGAAATTGACTTCACTCCTCCCTTCAG.............................................................................AAGGATTGATATGGTAGAGGAATTGGAGAAGATTGCAAACTTGAATATACCCAAGGATCTCTCTAGTGATGAAACCAACAAATATCTCATAGATGCTTGTGCAAAGTTTGAGATCAGATGTCCTCCACCTCTAACAACAACTAGATTACTTGATAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTGGGCCACTTTCTGGAGGGGACATGTGTTAACCCTACTTTCATTATCAACCATCCAGAGATAATGAGTCCTTTGGCGAAGTGGCACAGATCGAAACCAGGCCTGACAGAACGTTTTGAACTGTTTATAAACAAACATGAA............................................................................................CTTTGTAATGCATACACTGAGTTGAATGACCCTGTTGTCCAACGCCAGCGCTTTGCTGATCAACTCAAG.............................................................................................................GACCGACAATCAGGTGATGATGAAGCTATGGCACTGGATGAGAACTTTTGCACAGCTCTTGAATATGGATTACCTCCTACTGGTGGTTGGGGATTGGGTATTGACCGACTTGCAATGTTGTTGACAGATTCACAAAACATCAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTTCTACTCTTTCCAGCCATGAAGCCACAGGATGAGCCAGCTTCCAAGGAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATAA--AAAACCTCAGGAGGAATCTGCCAAGCCTCAGGATGAACTTACAATGCAAG.......................................................................................................................................................ATGTGGAAAAGCAGATTTCCGACATCAAAATGAACTGAATCAGATCATAGATATATTGAACGTTGAGTTCCTGCTGCTCCTGGAGTAGCATTTTTGTGATACCTTTTTTTCTTTTTTTCTTTTACTATTTAATTAATGGTAATTGTCTATTGTTATGGCAAATGCTATCTTTAATTTGTTAGTATCAGAAACTTTACTCGTATACTTATGAATATGGTTGTATCCAGTC-AAATACTTTTAAGATGTATTCAT--TTATGCTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0059D21-oytiE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M7703-2" ref_strand="+" ref_description="SGN-M7703-2 C2_At3g11710-2 [cosii_markers]">
      <seq>tagcctccatatccatttctctttcagctctacactctgcctctgtttttacagttacacttgcatcaacaaattgtcggctgctccggtcgccgccgtcagcaatggggaaatcagaaaaaaagccagcctctcagccccagaaagtggagaagaagccagctgctcagtcacagaagaattctgcagccgatgatgacatggatccaacgcaatacttcgaaaataggctgaaagcacttgcagctgaaaaggaaaatgggcagaacccttacccacacaaattccaaggggaaaaccatatgtctatccctaaatttgtcaataaatacggagttttagagagtggagttcactccgaagatgaagtgtccttgactggaaggataatgaacaaacgtgcctcttctgcaaagctgcttttctatgatttacatggtgaaggtgccaaagttcaagtcatgacaagtgcaagagattctgtgttgaatgaagaagacttcattaaatttcattctggtgtgaagcgtggtgatattgtaggaattactggatgtccaggtaagagtaaaaggggagagctgagtatttttcccaaatcattcatagtgttatctcactgtcttcatatgatgccacggcagaaaggtgcccagacagagacagctaagaatcctgaagcatgggtccccggaagtggccgcaatccagattcgtatgtgttaaaggatcaggaaacacgatatagacagcgttatttggatttgatgctgaacttagaggtccgccacatatttaaaacccgtgcaaagatcataacttttattcgaagctttcttgataaccgtgacttcctagaggtagagacccccatgatgaacatgattgctggtggggcagctgcacgtccatttgtgacccaccacaatgatttgaatatgaggcttttcatgcgtattgctcctgaactctatcttaaagagctggttgttggtggcttggatcgtgtctatgagattgggaaacaatttagaaacgagggaattgacttgacgcacaatcctgaattcaccacttgcgagttttatatggcatatgcagattacaatgacttgatggagctaactgaaaatatgctaagtgggatggtgaaggaacttacaggtggctatataatcaagtatcatgcgaaagggttggagagtgacccaattgaaattgacttcactcctcccttcagacggattgatatggtagaggaattggagaagattgcaaacttgaatatacccaaggatctctcaagtgatgaaaccaacaaatatctcatagatgcttgcgcgaagtttgagatcagatgtcctccacctctaacaacaactagattacttgataaacttgtgggacactttctggaggagacatgtgttaaccctactttcattatcaaccatccagagataatgagtcctttggcaaagtggcacagatcgaaaccaggcctgacagaacgttttgaactgtttataaacaaacatgaactctgtaatgcatacaccgagttgaatgaccctgttgtccaacgccagcgctttgctgatcaactcaaggaccgacaatcaggtgatgatgaagctatggcactggatgagaacttttgcaccgctcttgaatatggattacctcctactggtggttggggattgggtattgaccgacttgcaatgttgttgacagattcacaaaacattaaggaagttcttctctttccagccatgaagccacaggatgagccaacttccaaggaaagcaataaaaaacctcaggaggaagccaagcctcaggatggacaagccaaacctcaggatgaacttacaatgaaagatgtggaaaagcagatttccgacatcaaaatgaactgaatcagatcatagatatattgacgcggagttcctgctgctccaggagtaccatttttgttataccttttttttcttttactatttgattaatggtaattgtctattgtaatggcaaatgctgtctttaattcgttagtatcagaaactttactcgtatacttatgaatatggttgtatttgtcaaaatacttttagatgtattcatgattatgctctctattccttcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0059D21-oytiE/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C06HBa0059D21.1" temp_strand="+" temp_description="C06HBa0059D21.1  AC209508.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0059D21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="64094" stop="72270"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64394" g_stop="64605" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="212" r_length="212" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64606" i_stop="65163" i_length="558">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65164" g_stop="65332" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="213" r_stop="381" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65333" i_stop="65435" i_length="103">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65436" g_stop="65529" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="475" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65530" i_stop="65617" i_length="88">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65618" g_stop="65703" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="561" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65704" i_stop="66776" i_length="1073">
            <donor d_prob="0.549" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="66777" g_stop="66886" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="562" r_stop="671" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="66887" i_stop="66960" i_length="74">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="66961" g_stop="67023" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="672" r_stop="734" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="67024" i_stop="67147" i_length="124">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="67148" g_stop="67273" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="735" r_stop="860" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="67274" i_stop="67373" i_length="100">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="67374" g_stop="67656" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="861" r_stop="1143" r_length="283" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="67657" i_stop="67766" i_length="110">
            <donor d_prob="0.690" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="67767" g_stop="67863" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1144" r_stop="1240" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="67864" i_stop="67940" i_length="77">
            <donor d_prob="0.919" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="67941" g_stop="68097" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="1241" r_stop="1397" r_length="157" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="68098" i_stop="68707" i_length="610">
            <donor d_prob="0.647" d_score="1.00"/>
            <acceptor a_prob="0.458" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="68708" g_stop="68851" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1398" r_stop="1541" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="68852" i_stop="68943" i_length="92">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="68944" g_stop="69012" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1542" r_stop="1610" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="69013" i_stop="69121" i_length="109">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="69122" g_stop="69265" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1611" r_stop="1754" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="69266" i_stop="69910" i_length="645">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="69911" g_stop="69966" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1755" r_stop="1810" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="69967" i_stop="71479" i_length="1513">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.594" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="71480" g_stop="71553" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1811" r_stop="1884" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="71554" i_stop="71704" i_length="151">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="71705" g_stop="71969" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="1885" r_stop="2149" r_length="265" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2150" polyA_stop="2159"/>
      <MATCH_line gen_id="C06HBa0059D21.1" gen_strand="+" ref_id="SGN-M7703-2" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2149</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0059D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-M7703-2" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64394" e_stop="64605"/>
          <exon e_start="65164" e_stop="65332"/>
          <exon e_start="65436" e_stop="65529"/>
          <exon e_start="65618" e_stop="65703"/>
          <exon e_start="66777" e_stop="66886"/>
          <exon e_start="66961" e_stop="67023"/>
          <exon e_start="67148" e_stop="67273"/>
          <exon e_start="67374" e_stop="67656"/>
          <exon e_start="67767" e_stop="67863"/>
          <exon e_start="67941" e_stop="68097"/>
          <exon e_start="68708" e_stop="68851"/>
          <exon e_start="68944" e_stop="69012"/>
          <exon e_start="69122" e_stop="69265"/>
          <exon e_start="69911" e_stop="69966"/>
          <exon e_start="71480" e_stop="71553"/>
          <exon e_start="71705" e_stop="71969"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCCTCCATATCCATTTCCCTTTCAGCTCTACACTCTGCCTCTGTTTTTACAGTTACACTTGCATCAACAAATTGTCGGCTGCTCCGGTCGCCGCCGTCAGCAATGGGGAAATCAGAAAAAAAGCCAGCCTCTCAGCCCCAGAAAGTGGAGAAGAAGCCAGCTGCTCAGTCACAGAAGAATTCTGCAGCCGATGATGACATGGATCCAACGGTGACTCTGCTTTTCCCTTTTCTATTTCTTGTTGAAGATTTTTTTTTTGGGTGTAATTAATCAATCATGTGTAAGTGTTAGATTGATAAAGAGCTGGGATAAAATTCTAAAGTTTTTGGGATATTTTTCCGTAAAGGCCCCTTTTCCTCTGTGTAGATGTTTTGGTTTTTTTGGGTGTGGTTAATTTGGTTTAGGTTAGTTTGTATGCTTTTCCGTATGAAATTTTGGGGCATTAAGATAAAGGCGCCAGTTTTTTTTTTCTCTGGTTGTATTTCTCTCTCTCGTCTTCTCGTCAGAGTAATGGGGAAGTCAGAGAGCATTCTGTAGCCGTCTACGAAATGAGTCAAAGTGTGACTCTATACATGTGTATTTCTTCATTTGGTGTAATTTAAGATTTTTTTTGGTGTAATTTACAAGAATGATAAGGGAAAGCTACACTTTTTGCTGATGTTTTCCAGTATAAATAGTTGTGAGTTATGTCCAAGGTTTAAATTGATCAACAGATAGAGAGTTGGCGTAAAAGTAACTTTTTTTGTGACTGGTTTTTCGGGATTGCAGCAATACTTCGAAAATAGGCTGAAAGCACTTGCAGCTGAAAAGGAAAATGGGCAGAACCCTTACCCACACAAATTCCAAGGGGAAAACCATATGTCTATCCCTAAATTTGTCAATAAATACGGAGTTTTAGAGAGTGGAGTTCACTCCGAAGATGAAGTGTCCTTGACTGGTAAATTTTACAGCATTTTGAGCTTACTTTCTTGATCAATTTATTTTTTGCAGTTTTTTGTTAAAAAAAATAAATTTGCATCAATGATTGTTTTTTTCGATAGGAAGGATAATGAACAAACGTGCCTCTTCTGCAAAGCTGCTTTTCTATGATTTACATGGTGAAGGTGCCAAAGTTCAAGTCATGACAAGTGCAAGGTGGTTCTATTACTCTTATCATTTTGTTGTTTGTGAGAAATAGAATTTTCTTTTCATTGAGAATTATTATGTCCTTATATATTTGCAGAGATTCTGTGTTGAATGAAGAAGACTTCATTAAATTTCATTCTGGTGTGAAGCGTGGTGATATTGTAGGAATTACTGGATGTCCAGGTGTGGGATTCTTATTTCCTGTTAGTTTAGTGACAGTTGTTATCTGTGGTAGTGTTGGTCTTGGCGGTGTACAAATAAGTTCTATTAGAAGAGAAATGTTACTCTTAGTCTCACTCCATCACGTACTTGAACACCATTAATTAATGCAGGGGAAAGGAACTGAAAACACAATGTTTATGTATTTTATTGGATTGGTGTACTGCAGCAGATTGAATGGTTAAGATTTGCATGTGAAGTTATGGTCATATTTAATTCCATAACAGCTATTCAGCTATCCAAATGAAAGATTTGACGATTCATGTCTTATCTGGCAGTTAACTGCATTTACCCGACCTTTTCTCTTCACACCACTTACTGCATGGATTCTAATTTAATTCATATTTAAGTTGATCATTTCTTGATCCTCCACTCTGAAGCTTTTATTTGAATTCAAATTTAATTAATAATGTTTTTGACTTTTTTCCCGACCATATAATTTTTTTGAAAGAGGAGGTTGATCAGCTGTTAGAGACGGGATACAGTTAATTGTCTTTTTATATTTGATTTTCAAAAAGTAAAATCTGGAGAATTATTTGACAAAGCAGAAAAATTTTTGAAAAAAAATGGACAACAAATAGAGCAGTGGCATAAGATTCTTATAGAAAATACACAAGTTTCAAGCTCTCATAGTAAGGAAGAGGAATGATAAAAGGCCGGGAATTAGTAAAAATGGAGTTCGAGAGAATAGATGCATGCATTTGTAAGTAGAAAAGAAATTAATTGGCAGGTGCATGAAAGAAAATAATATATACTTATACCATTACATTTATTAGATCATGATTACCAGAGGTGACCTTTGTCAAGCTGTCTCCTAAAGGGGCAGTGGTATCCATGTTTAATACAAAACATGTTCTTCGGTTTGCGTGCATTTTGGCTTCTTGGTTTCGCCATAGTGTCTTACCTCAAGTATTGTGCAATTGACAGGGTGAATATCTTTATTTAGATGGTGTAGTTTATGCAAAGATCTCATGAGATGATAATAGTGATGTTTGGTTTGGTAACATATTTCTAATTCTTCCTACCTCATTCATCAGGTAAGAGTAAAAGGGGAGAGCTGAGTATTTTTCCCAAATCATTCATAGTGTTATCTCACTGTCTTCATATGATGCCACGGCAGAAAGGTGCCCAGACAGAGACAGCTAAGGTCAGCGAATTTTGTTTTGGATGATGTCTAATATCAGTCTCAGTTTGATTGAACTATATCTAATTGTGCTGCAGAATCCTGAAGCATGGGTCCCCGGAAGTGGCCGCAATCCAGATTCGTATGTGTTAAAGGATCAGGTATCTTATGCCTCTCAATTTTTTCAGAATTTTTTTTCTTTATAGTGCCTTACTTTCATCATATTTCCTTTAAAAGATTTTATGCCTCTGATGTGATCTTGTGGTTCATTTGTTCTCTGTCCAGGAAACACGATATAGACAGCGTTATTTGGATTTGATGCTGAACTTAGAGGTCCGCCACATATTTAAAACCCGTGCAAAGATCATAACTTTTATTCGAAGCTTTCTTGATAACCGTGACTTCCTAGAGGTTGGTGTTTATAAAGCTGTTTTACTTTGCCTTTGTTTAGTTGATATTATGATCTTAGCTTGAATATAACTAGTAAAATATATAATTGTATTTGTAACAGGTAGAGACCCCCATGATGAACATGATTGCTGGTGGGGCAGCTGCACGTCCATTTGTGACCCACCACAATGATTTGAATATGAGGCTTTTCATGCGTATTGCTCCTGAACTCTATCTTAAAGAGCTGGTTGTTGGTGGCTTGGATCGTGTCTATGAGATTGGGAAACAATTTAGAAACGAGGGAATTGACTTGACGCACAATCCTGAATTCACCACTTGCGAGTTTTATATGGCATATGCAGATTACAATGACTTGATGGAGCTAACTGAAAATATGCTAAGTGGTAAGTAACCAAAATATTTGGATCCAAATGTTGTGGGGGAAGCTTATGTATATTTAATCTTTTCATGATATTTATTCTTTTATTTTATATTACTGACCATACATGAACAGGGATGGTGAAGGAACTTACAGGTGGCTATATAATCAAGTATCATGCGAAAGGGTTGGAGAGTGACCCAATTGAAATTGACTTCACTCCTCCCTTCAGGTTTGGGAGCTTTTCTGGTTTGTCATGTTTTGGTTTAGTTTACAAGGCACTAAGATACTTATGCGTTGCTTCTGCAGACGGATTGATATGGTAGAGGAATTGGAGAAGATTGCAAACTTGAATATACCCAAGGATCTCTCAAGTGATGAAACCAACAAATATCTCATAGATGCTTGCGCGAAGTTTGAGATCAGATGTCCTCCACCTCTAACAACAACTAGATTACTTGATAAAGTAAATTTTCTTTCAGATATCTTCCGGATAGCCAATTTTTACATATGCAATCTAGTAACTTGCTTTTCCTGCTGATCCCCTTTTCTTTTGTATTGTCGCGCACTACCCTCTAGCGATATTGCAATGTTTGAGAAATTTTTTCAGTTTCTGGGCTTTGTGTTCTTCTGTTCTCTCCATGAGCAGTACTACATGAGGCAACAAAAAGGCTACTGTAAAGAGGAGGGTGGAGGGTAATAGGCAAATGTGAGAAAATAAAGAGGAAAGAAATAGAGATGAATAGGGTTGCTAGCGTTTTAGAGCTATATTAGTGTGAAATCTGTAGTTTGTGTGGCATTTGATCTATAACATGTGTTATTGCCAATAAATCTCATTGTTGATTGTTAAATTGGTTTAGAATCAATTGCTGTTTGTCTGCTTTTCGGCATGTAACATTATAAAATTGTTTAATGTTTGGTCCCATTTCTGCATTTATTGGTGATACCTCTTCAAAAAAACATGTACTAACAGGAATCAAGTGTTCTCATTCCTTTGGTGCTATTGGTAACAGTTTTTTGCCTAAGCAGCTTTATGACGTCGGAACTAAGTCTCCCTTCATTTTCTGTGAATTTAGCTTGTGGGACACTTTCTGGAGGAGACATGTGTTAACCCTACTTTCATTATCAACCATCCAGAGATAATGAGTCCTTTGGCAAAGTGGCACAGATCGAAACCAGGCCTGACAGAACGTTTTGAACTGTTTATAAACAAACATGAAGTATGCATTCTTTCAAATCTTTCAAAGTTCAAACTCTATATTACCATCCCAACACATGTTGTAATGTGCTTCTCTGTTAAATAACTTGACAGCTCTGTAATGCATACACCGAGTTGAATGACCCTGTTGTCCAACGCCAGCGCTTTGCTGATCAACTCAAGGTATTTGTGGGAAGTGTGCAACTTGACTTGGTGGTTGTTTGTGTTCATCTTGTTGTATCATTTCGATTATGTGCAACTACTTATTTAGGCATAATTAATGTCAATTCAGGACCGACAATCAGGTGATGATGAAGCTATGGCACTGGATGAGAACTTTTGCACCGCTCTTGAATATGGATTACCTCCTACTGGTGGTTGGGGATTGGGTATTGACCGACTTGCAATGTTGTTGACAGATTCACAAAACATTAAGGTTTGTGCCTTCACTTATTTAGTGAGGAAGAAATGACCACTTAGTTCCAAATGGCCGAGGGAATGGCCTGTTGTCTTCCTGATTCTTACATTATCTTCATCAATCTTCACCTCATTAGATAGCTTTTGAGGTTAATTTAGGCATTTTCTTAGCATGGTATTAGAGCCAGAGCAAAACTAATCCATGTTCTTGGTTTATCCAATGTTGAGCAATCATGTTGTATTGTCCGTGTTCCAGATGTTTCAACTCCTATGCATCTGGGTTAGTTACCATATCTTACATTTTTTTTTTTAAAAAAAATGGAATGCTGAGTTATACAATTTTAGCAAATTCTTACCTCATGATCTAGCTTTTGGGTTTTTTGTTAGACTCGAGGTTCTTTTATTTTAACTATGATGAAATGACCATTCATTTCCAATCAATTTCTCTGTTGTCCTGTTTGGCATCCATTTCTAAATGGTGGATGGAGGAGGGCATTCATAGAAGAGCCCACAAAGGCTGGTCTTCTACGAATTTAGTGTTGTCTCAGCATTCCCAACTCTCATTTTCTTGTCACTTCCTTTATGAGAAAGCTAGTGTTTCGTATTATTTTAGTTAGATACTGAAATCGATTTTTCTTTCCCTTGTTATACTTTTTTTCTACAGGAAGTTCTTCTCTTTCCAGCCATGAAGCCACAGGATGAGCCAACTTCCAAGGAAAGGTAAAGATTTCCTCCTTTCTTTTCTTTGAGTGATATACACCGTTAGTAGTGTTTGCTGTCAGATGGTTAGGATTAAGGTTTGTCTTGGATTGTGCTGACAGCCAGCTGACTGATTTAGCTGTCCCAAAAAAGGGGGAAAACTAGCGAACTGATTGATCTTCAAATTAATATCTAGTCTTTGTGGGTAGAGTTTGTACTTGGCATCCAAGGGTGTAGCCTAGTGGAAATTTGAAGTGGGTTGACAACCATGTGGTCTCAGCTTCAATTCCCAGAGGAGACCAAAAAAACTAGGTGTTTTTTTTCATCTATCCGGATCTTGATGGATAGGGTCACTTAGTACTTGTGCAATGGCAGAAGTCGGGAAACAGACTATTGCACAACGACTAGGACTCGTGTCGGAAGAGCTTGGAGGTAGCAGTTAATTAGTTGTGGTGCACGCACACTGGCTGGGCACCACAGTTATAAAAAGAGTTACTTTGTACTTGTACTGATGGAGGGATGTATGTCCTCGGTGGAATAGTTGATGAGCATCAAAGCTGCCCTAGACACTACTATCATAAAATAGTAAATAATGTCCATGATAATAAATATTGACTAAGCAGTGGCCTATTTTTGGGGGATATTTTTTAAAACAGTTTACTATGTTCTTCGGTGGGGTTAATCTTGGTTTCTGCTTAGCTGTAGGAAACACATATATTTGCTTGTAAATATGATTTTACGATGTTATCTTTTACCTTAAGATTAAGCTGCCAGTGAGGCCTATGTTTAAACTCTCATACATATTTTTTAAAATTATATTGTGAAGTTGAATCCTTATTTAGCGGAATAATATTGAAAACCAATAAAGAGGAATAGGTGATGCTGCTTTGCTAGCTGAATTGTGATTAGTAGCACATGTTTTGAAAGAAGCTTGAGAATATTTCTTAAAAGAGTGGGTTACATGATTTGCATTGTTAACTGGGAAGGGATTAGTGGAAAATTTTACGTCTTTTACATGGAATAAATTGGATAATGCCCAGAATTGTGGTTGGGTGTTTGCTTGGCCTGGAGTGAGAGCTGTATAAGAAAAGCCTATAAAAATCCAAAGTGCCCGTGCCCCGTGTTGCGCAGTTCAGAGTACCTGTTTCTTCTTTGCAGCACGATTCAAGCTACAAAATCCTTTATTTCCTTATATAATACTGGATGATTGGGAAAGAACAAAATAGGTGGTATTTTGCAGGGGTTGCTTTTTCAAGACATAGTCTAAGTTAACTTGCTGTTACCTTGTTTTTTTAAAAAAGTTAAAAGTCTGTTACCTTGGTATTCTTGGTGGAAAGTAGAATAAACATGAACTTAAGACGGATTTCACAGGGTTTTCTAAGTCTGTTGCATCTGTGGAAAAGGATATTGTTTTCGTCATTCTACGGTCTAAAAAGCAGATGCTGCAAAAATGAAAGCTTTCATGTGCTTTTCCTTTCAAGCTATTTGAGAAAATACATCACACTTATCATTGAGCTCTCTTTTCTGCATTCAGCAATAAAAAACCTCAGGAGGAAGCCAAGCCTCAGGATGGACAAGCCAAACCTCAGGATGAACTTACAATGAAAGGTAGATAAATCTGGAAGATATGCCTGACCTTTTATTTTCTTCTACTGTCCGAGCATTTTCATTTTTGCCTCTGTTTGTAAACAAAGCTTAGTTCTATTGATATTTGTCTTTGGGGGAGAACTGCCTCTTACTTGTTTTTACATTGCTACAGATGTGGAAAAGCAGATTTCCGACATCAAAATGAACTGAATCAGATCATAGATATATTGACGCGGAGTTCCTGCTGCTCCAGGAGTACCATTTTTGTTATACCTTTTTTTTCTTTTACTATTTGATTAATGGTAATTGTCTATTGTAATGGCAAATGCTGTCTTTAATTCGTTAGTATCAGAAACTTTACTCGTATACTTATGAATATGGTTGTATTTGTCAAAATACTTTTAGATGTATTCATGATTATGCTCTCTATTCCTTCC</genome_strand>
        <mrna_strand>TAGCCTCCATATCCATTTCTCTTTCAGCTCTACACTCTGCCTCTGTTTTTACAGTTACACTTGCATCAACAAATTGTCGGCTGCTCCGGTCGCCGCCGTCAGCAATGGGGAAATCAGAAAAAAAGCCAGCCTCTCAGCCCCAGAAAGTGGAGAAGAAGCCAGCTGCTCAGTCACAGAAGAATTCTGCAGCCGATGATGACATGGATCCAACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATACTTCGAAAATAGGCTGAAAGCACTTGCAGCTGAAAAGGAAAATGGGCAGAACCCTTACCCACACAAATTCCAAGGGGAAAACCATATGTCTATCCCTAAATTTGTCAATAAATACGGAGTTTTAGAGAGTGGAGTTCACTCCGAAGATGAAGTGTCCTTGACTG.......................................................................................................GAAGGATAATGAACAAACGTGCCTCTTCTGCAAAGCTGCTTTTCTATGATTTACATGGTGAAGGTGCCAAAGTTCAAGTCATGACAAGTGCAAG........................................................................................AGATTCTGTGTTGAATGAAGAAGACTTCATTAAATTTCATTCTGGTGTGAAGCGTGGTGATATTGTAGGAATTACTGGATGTCCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGAGTAAAAGGGGAGAGCTGAGTATTTTTCCCAAATCATTCATAGTGTTATCTCACTGTCTTCATATGATGCCACGGCAGAAAGGTGCCCAGACAGAGACAGCTAAG..........................................................................AATCCTGAAGCATGGGTCCCCGGAAGTGGCCGCAATCCAGATTCGTATGTGTTAAAGGATCAG............................................................................................................................GAAACACGATATAGACAGCGTTATTTGGATTTGATGCTGAACTTAGAGGTCCGCCACATATTTAAAACCCGTGCAAAGATCATAACTTTTATTCGAAGCTTTCTTGATAACCGTGACTTCCTAGAG....................................................................................................GTAGAGACCCCCATGATGAACATGATTGCTGGTGGGGCAGCTGCACGTCCATTTGTGACCCACCACAATGATTTGAATATGAGGCTTTTCATGCGTATTGCTCCTGAACTCTATCTTAAAGAGCTGGTTGTTGGTGGCTTGGATCGTGTCTATGAGATTGGGAAACAATTTAGAAACGAGGGAATTGACTTGACGCACAATCCTGAATTCACCACTTGCGAGTTTTATATGGCATATGCAGATTACAATGACTTGATGGAGCTAACTGAAAATATGCTAAGTG..............................................................................................................GGATGGTGAAGGAACTTACAGGTGGCTATATAATCAAGTATCATGCGAAAGGGTTGGAGAGTGACCCAATTGAAATTGACTTCACTCCTCCCTTCAG.............................................................................ACGGATTGATATGGTAGAGGAATTGGAGAAGATTGCAAACTTGAATATACCCAAGGATCTCTCAAGTGATGAAACCAACAAATATCTCATAGATGCTTGCGCGAAGTTTGAGATCAGATGTCCTCCACCTCTAACAACAACTAGATTACTTGATAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTGGGACACTTTCTGGAGGAGACATGTGTTAACCCTACTTTCATTATCAACCATCCAGAGATAATGAGTCCTTTGGCAAAGTGGCACAGATCGAAACCAGGCCTGACAGAACGTTTTGAACTGTTTATAAACAAACATGAA............................................................................................CTCTGTAATGCATACACCGAGTTGAATGACCCTGTTGTCCAACGCCAGCGCTTTGCTGATCAACTCAAG.............................................................................................................GACCGACAATCAGGTGATGATGAAGCTATGGCACTGGATGAGAACTTTTGCACCGCTCTTGAATATGGATTACCTCCTACTGGTGGTTGGGGATTGGGTATTGACCGACTTGCAATGTTGTTGACAGATTCACAAAACATTAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTTCTTCTCTTTCCAGCCATGAAGCCACAGGATGAGCCAACTTCCAAGGAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATAAAAAACCTCAGGAGGAAGCCAAGCCTCAGGATGGACAAGCCAAACCTCAGGATGAACTTACAATGAAAG.......................................................................................................................................................ATGTGGAAAAGCAGATTTCCGACATCAAAATGAACTGAATCAGATCATAGATATATTGACGCGGAGTTCCTGCTGCTCCAGGAGTACCATTTTTGTTATACCTTTTTTTTCTTTTACTATTTGATTAATGGTAATTGTCTATTGTAATGGCAAATGCTGTCTTTAATTCGTTAGTATCAGAAACTTTACTCGTATACTTATGAATATGGTTGTATTTGTCAAAATACTTTTAGATGTATTCATGATTATGCTCTCTATTCCTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0059D21-oytiE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M1885" ref_strand="+" ref_description="SGN-M1885 T1272 [cos_markers]">
      <seq>tccatatccatttctctttcagctctacactctgcctctgtttttacagttacacttgcaccaaaaaattgtcggctgctccggtcgccgccgtcagcaatggggaaatcagaaaaaaagccagcctctcagccccagaaagcggagaagaagccagctgctcagtcacagaagaattctgcagccgatgatgacatggatccaacgcaatactttgaaaataggctgaaagcacttgcagctgagaaggaaaatgggcagaacccttacccacacaaattccaaggggaaaaccatatgtctatccctaaatttgtcaataaatacggagttttagagagtggagttcattccgaagatgaagtgtccttgactggaaggataatgaacaaacgtgcctcttctgcaaagcttcttttctatgatttacatggtgaaggtgccaaagttcaagtcatgacaagtgcaagagattctgtgttgaatgaagaagacttcattaaatttcattctggtgtgaagcgtggcgatattgtagggattactggatgtccaggtaagagtaaaaggggagagctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0059D21-oytiE/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C06HBa0059D21.1" temp_strand="+" temp_description="C06HBa0059D21.1  AC209508.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0059D21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="64099" stop="67099"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64399" g_stop="64605" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="207" r_length="207" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64606" i_stop="65163" i_length="558">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65164" g_stop="65332" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="376" r_length="169" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65333" i_stop="65435" i_length="103">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.950" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65436" g_stop="65529" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="470" r_length="94" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65530" i_stop="65617" i_length="88">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65618" g_stop="65703" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="556" r_length="86" r_score="0.977"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65704" i_stop="66776" i_length="1073">
            <donor d_prob="0.549" d_score="0.96"/>
            <acceptor a_prob="0.964" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="66777" g_stop="66799" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="557" r_stop="579" r_length="23" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0059D21.1" gen_strand="+" ref_id="SGN-M1885" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0059D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-M1885" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64399" e_stop="64605"/>
          <exon e_start="65164" e_stop="65332"/>
          <exon e_start="65436" e_stop="65529"/>
          <exon e_start="65618" e_stop="65703"/>
          <exon e_start="66777" e_stop="66799"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCATATCCATTTCCCTTTCAGCTCTACACTCTGCCTCTGTTTTTACAGTTACACTTGCATCAACAAATTGTCGGCTGCTCCGGTCGCCGCCGTCAGCAATGGGGAAATCAGAAAAAAAGCCAGCCTCTCAGCCCCAGAAAGTGGAGAAGAAGCCAGCTGCTCAGTCACAGAAGAATTCTGCAGCCGATGATGACATGGATCCAACGGTGACTCTGCTTTTCCCTTTTCTATTTCTTGTTGAAGATTTTTTTTTTGGGTGTAATTAATCAATCATGTGTAAGTGTTAGATTGATAAAGAGCTGGGATAAAATTCTAAAGTTTTTGGGATATTTTTCCGTAAAGGCCCCTTTTCCTCTGTGTAGATGTTTTGGTTTTTTTGGGTGTGGTTAATTTGGTTTAGGTTAGTTTGTATGCTTTTCCGTATGAAATTTTGGGGCATTAAGATAAAGGCGCCAGTTTTTTTTTTCTCTGGTTGTATTTCTCTCTCTCGTCTTCTCGTCAGAGTAATGGGGAAGTCAGAGAGCATTCTGTAGCCGTCTACGAAATGAGTCAAAGTGTGACTCTATACATGTGTATTTCTTCATTTGGTGTAATTTAAGATTTTTTTTGGTGTAATTTACAAGAATGATAAGGGAAAGCTACACTTTTTGCTGATGTTTTCCAGTATAAATAGTTGTGAGTTATGTCCAAGGTTTAAATTGATCAACAGATAGAGAGTTGGCGTAAAAGTAACTTTTTTTGTGACTGGTTTTTCGGGATTGCAGCAATACTTCGAAAATAGGCTGAAAGCACTTGCAGCTGAAAAGGAAAATGGGCAGAACCCTTACCCACACAAATTCCAAGGGGAAAACCATATGTCTATCCCTAAATTTGTCAATAAATACGGAGTTTTAGAGAGTGGAGTTCACTCCGAAGATGAAGTGTCCTTGACTGGTAAATTTTACAGCATTTTGAGCTTACTTTCTTGATCAATTTATTTTTTGCAGTTTTTTGTTAAAAAAAATAAATTTGCATCAATGATTGTTTTTTTCGATAGGAAGGATAATGAACAAACGTGCCTCTTCTGCAAAGCTGCTTTTCTATGATTTACATGGTGAAGGTGCCAAAGTTCAAGTCATGACAAGTGCAAGGTGGTTCTATTACTCTTATCATTTTGTTGTTTGTGAGAAATAGAATTTTCTTTTCATTGAGAATTATTATGTCCTTATATATTTGCAGAGATTCTGTGTTGAATGAAGAAGACTTCATTAAATTTCATTCTGGTGTGAAGCGTGGTGATATTGTAGGAATTACTGGATGTCCAGGTGTGGGATTCTTATTTCCTGTTAGTTTAGTGACAGTTGTTATCTGTGGTAGTGTTGGTCTTGGCGGTGTACAAATAAGTTCTATTAGAAGAGAAATGTTACTCTTAGTCTCACTCCATCACGTACTTGAACACCATTAATTAATGCAGGGGAAAGGAACTGAAAACACAATGTTTATGTATTTTATTGGATTGGTGTACTGCAGCAGATTGAATGGTTAAGATTTGCATGTGAAGTTATGGTCATATTTAATTCCATAACAGCTATTCAGCTATCCAAATGAAAGATTTGACGATTCATGTCTTATCTGGCAGTTAACTGCATTTACCCGACCTTTTCTCTTCACACCACTTACTGCATGGATTCTAATTTAATTCATATTTAAGTTGATCATTTCTTGATCCTCCACTCTGAAGCTTTTATTTGAATTCAAATTTAATTAATAATGTTTTTGACTTTTTTCCCGACCATATAATTTTTTTGAAAGAGGAGGTTGATCAGCTGTTAGAGACGGGATACAGTTAATTGTCTTTTTATATTTGATTTTCAAAAAGTAAAATCTGGAGAATTATTTGACAAAGCAGAAAAATTTTTGAAAAAAAATGGACAACAAATAGAGCAGTGGCATAAGATTCTTATAGAAAATACACAAGTTTCAAGCTCTCATAGTAAGGAAGAGGAATGATAAAAGGCCGGGAATTAGTAAAAATGGAGTTCGAGAGAATAGATGCATGCATTTGTAAGTAGAAAAGAAATTAATTGGCAGGTGCATGAAAGAAAATAATATATACTTATACCATTACATTTATTAGATCATGATTACCAGAGGTGACCTTTGTCAAGCTGTCTCCTAAAGGGGCAGTGGTATCCATGTTTAATACAAAACATGTTCTTCGGTTTGCGTGCATTTTGGCTTCTTGGTTTCGCCATAGTGTCTTACCTCAAGTATTGTGCAATTGACAGGGTGAATATCTTTATTTAGATGGTGTAGTTTATGCAAAGATCTCATGAGATGATAATAGTGATGTTTGGTTTGGTAACATATTTCTAATTCTTCCTACCTCATTCATCAGGTAAGAGTAAAAGGGGAGAGCTG</genome_strand>
        <mrna_strand>TCCATATCCATTTCTCTTTCAGCTCTACACTCTGCCTCTGTTTTTACAGTTACACTTGCACCAAAAAATTGTCGGCTGCTCCGGTCGCCGCCGTCAGCAATGGGGAAATCAGAAAAAAAGCCAGCCTCTCAGCCCCAGAAAGCGGAGAAGAAGCCAGCTGCTCAGTCACAGAAGAATTCTGCAGCCGATGATGACATGGATCCAACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATACTTTGAAAATAGGCTGAAAGCACTTGCAGCTGAGAAGGAAAATGGGCAGAACCCTTACCCACACAAATTCCAAGGGGAAAACCATATGTCTATCCCTAAATTTGTCAATAAATACGGAGTTTTAGAGAGTGGAGTTCATTCCGAAGATGAAGTGTCCTTGACTG.......................................................................................................GAAGGATAATGAACAAACGTGCCTCTTCTGCAAAGCTTCTTTTCTATGATTTACATGGTGAAGGTGCCAAAGTTCAAGTCATGACAAGTGCAAG........................................................................................AGATTCTGTGTTGAATGAAGAAGACTTCATTAAATTTCATTCTGGTGTGAAGCGTGGCGATATTGTAGGGATTACTGGATGTCCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGAGTAAAAGGGGAGAGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0059D21-oytiE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M490-F" ref_strand="+" ref_description="SGN-M490-F TG162-F [rflp_markers_forward]">
      <seq>ccctgcattaattaatggtgttcaaggacgagaaggagtgagactaagagaaacatttctcttctagtagaacttatatgtacaccgacaagaccaacactaccacagataacaactgtcactaaactaacaggaaataagaatcccacacctggacatccagtaattcctacaatatcaccacgcttcacaccagaatgaaatttaatgaagtcttcttcattcgacacagaatctctgcgaatatataaggacataataattctcaatgaaaagaaaattctatttctcacaaacaacaaaatgataagagtaatagaaccaccttgcacttgtcatgacttgaactttggcaccttcaccatgtaaatcatagaaaagcagctttgcagaagaggcacgtttgttcattatccttcctatcgaaaaaaacaatcattgatgcaaatttattttttttaacaaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0059D21-oytiE/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C06HBa0059D21.1" temp_strand="-" temp_description="C06HBa0059D21.1  AC209508.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0059D21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="66154" stop="65085"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65854" g_stop="65385" g_length="470"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="470" r_length="470" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0059D21.1" gen_strand="-" ref_id="SGN-M490-F" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>470</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0059D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-M490-F" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65854" e_stop="65385"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTGCATTAATTAATGGTGTTCAAGTACGTGATGGAGTGAGACTAAGAGTAACATTTCTCTTCTAATAGAACTTATTTGTACACCGCCAAGACCAACACTACCACAGATAACAACTGTCACTAAACTAACAGGAAATAAGAATCCCACACCTGGACATCCAGTAATTCCTACAATATCACCACGCTTCACACCAGAATGAAATTTAATGAAGTCTTCTTCATTCAACACAGAATCTCTGCAAATATATAAGGACATAATAATTCTCAATGAAAAGAAAATTCTATTTCTCACAAACAACAAAATGATAAGAGTAATAGAACCACCTTGCACTTGTCATGACTTGAACTTTGGCACCTTCACCATGTAAATCATAGAAAAGCAGCTTTGCAGAAGAGGCACGTTTGTTCATTATCCTTCCTATCGAAAAAAACAATCATTGATGCAAATTTATTTTTTTTAACAAAAAAC</genome_strand>
        <mrna_strand>CCCTGCATTAATTAATGGTGTTCAAGGACGAGAAGGAGTGAGACTAAGAGAAACATTTCTCTTCTAGTAGAACTTATATGTACACCGACAAGACCAACACTACCACAGATAACAACTGTCACTAAACTAACAGGAAATAAGAATCCCACACCTGGACATCCAGTAATTCCTACAATATCACCACGCTTCACACCAGAATGAAATTTAATGAAGTCTTCTTCATTCGACACAGAATCTCTGCGAATATATAAGGACATAATAATTCTCAATGAAAAGAAAATTCTATTTCTCACAAACAACAAAATGATAAGAGTAATAGAACCACCTTGCACTTGTCATGACTTGAACTTTGGCACCTTCACCATGTAAATCATAGAAAAGCAGCTTTGCAGAAGAGGCACGTTTGTTCATTATCCTTCCTATCGAAAAAAACAATCATTGATGCAAATTTATTTTTTTTAACAAAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0059D21-oytiE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M490-R" ref_strand="+" ref_description="SGN-M490-R TG162-R [rflp_markers_reverse]">
      <seq>gtacaccaatccaataaaatacataaacattgtgttttcagttcctttcccctgcattaattaatggtgttcaagtacgtgatggagtgagactaagagtaacatttctcttctaatagaacttatttgtacaccgccaagaccaacactaccacagataacaactgtcactaaactaacaggaaataagaatcccacacctggacatccagtaattcctacaatatcaccacgcttcacaccagaatgaaatttaatgaagtcttcttcattcaacacagaatctctgcaaatatataaggacataataattctcaatgaaaagaaaattctatttctcacaaacaacaaaatgataagagtaatagaaccaccttgcacttgtcatgacttgaactttggcaccttcaccatgtaaatcatagaaaagcagctttgcagaagaggcacgtttgttcattatccttcctatcgaaaaaaacaatcattgatgcaaatttattttttttaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0059D21-oytiE/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C06HBa0059D21.1" temp_strand="-" temp_description="C06HBa0059D21.1  AC209508.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0059D21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="66203" stop="65091"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65903" g_stop="65391" g_length="513"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="513" r_length="513" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0059D21.1" gen_strand="-" ref_id="SGN-M490-R" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0059D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-M490-R" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65903" e_stop="65391"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTACACCAATCCAATAAAATACATAAACATTGTGTTTTCAGTTCCTTTCCCCTGCATTAATTAATGGTGTTCAAGTACGTGATGGAGTGAGACTAAGAGTAACATTTCTCTTCTAATAGAACTTATTTGTACACCGCCAAGACCAACACTACCACAGATAACAACTGTCACTAAACTAACAGGAAATAAGAATCCCACACCTGGACATCCAGTAATTCCTACAATATCACCACGCTTCACACCAGAATGAAATTTAATGAAGTCTTCTTCATTCAACACAGAATCTCTGCAAATATATAAGGACATAATAATTCTCAATGAAAAGAAAATTCTATTTCTCACAAACAACAAAATGATAAGAGTAATAGAACCACCTTGCACTTGTCATGACTTGAACTTTGGCACCTTCACCATGTAAATCATAGAAAAGCAGCTTTGCAGAAGAGGCACGTTTGTTCATTATCCTTCCTATCGAAAAAAACAATCATTGATGCAAATTTATTTTTTTTAACA</genome_strand>
        <mrna_strand>GTACACCAATCCAATAAAATACATAAACATTGTGTTTTCAGTTCCTTTCCCCTGCATTAATTAATGGTGTTCAAGTACGTGATGGAGTGAGACTAAGAGTAACATTTCTCTTCTAATAGAACTTATTTGTACACCGCCAAGACCAACACTACCACAGATAACAACTGTCACTAAACTAACAGGAAATAAGAATCCCACACCTGGACATCCAGTAATTCCTACAATATCACCACGCTTCACACCAGAATGAAATTTAATGAAGTCTTCTTCATTCAACACAGAATCTCTGCAAATATATAAGGACATAATAATTCTCAATGAAAAGAAAATTCTATTTCTCACAAACAACAAAATGATAAGAGTAATAGAACCACCTTGCACTTGTCATGACTTGAACTTTGGCACCTTCACCATGTAAATCATAGAAAAGCAGCTTTGCAGAAGAGGCACGTTTGTTCATTATCCTTCCTATCGAAAAAAACAATCATTGATGCAAATTTATTTTTTTTAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0059D21-oytiE/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M7703" ref_strand="+" ref_description="SGN-M7703 C2_At3g11710 [cosii_markers]">
      <seq>cccccgggctgcaggttgacgcacaatcctgaattcaccacttgcgagttttacatggcatatgcagattacaatgacttgatggatctaactgagaaaatgctaagtgagatggtgaaggaacttacaggtggctatataatcaagtatcatgcgaaggggtttgagagtgacccaattgaaatcgacttcactcctcccttcagaaggattgatatggtagaggaattggagaagattgcaaacttgaatatacccaaggatctctcaagtgatgaaaccaacaaatatctcatagatgcttgttcaaagtttgagatcagatgtcctccaccccaaacaacagctagattacttgacaaacttgtgggacactttctggaggagacatgtgttaaccctactttcattatcaaccatccagagataatgagtcctttggcaaagtggcacagatcgaaaccaggcctgacagaacgttttgaactgtttataaacaaacatgaactttgcaatgcatacaccgagttgaatgaccctgttgtccaacgacagcgctttgctgatcaactcaaggaccgacaatcaggtgatgatgaagctatggcactggatgaaaacttttgcacagctcttgaatatggattacctcctactggtggttggggattgggtattgaccgacttgcaatgttgctgacagattcacaaaacatcaaggaagttctactctttccagctatgaagccacaggatgacccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0059D21-oytiE/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C06HBa0059D21.1" temp_strand="+" temp_description="C06HBa0059D21.1  AC209508.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0059D21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="67263" stop="70252"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67548" g_stop="67656" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="109" r_length="109" r_score="0.862"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67657" i_stop="67766" i_length="110">
            <donor d_prob="0.690" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67767" g_stop="67863" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="206" r_length="97" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67864" i_stop="67940" i_length="77">
            <donor d_prob="0.919" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67941" g_stop="68097" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="363" r_length="157" r_score="0.949"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="68098" i_stop="68707" i_length="610">
            <donor d_prob="0.647" d_score="0.92"/>
            <acceptor a_prob="0.458" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="68708" g_stop="68851" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="507" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="68852" i_stop="68943" i_length="92">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="68944" g_stop="69012" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="576" r_length="69" r_score="0.957"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="69013" i_stop="69121" i_length="109">
            <donor d_prob="0.894" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="69122" g_stop="69265" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="577" r_stop="720" r_length="144" r_score="0.972"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="69266" i_stop="69910" i_length="645">
            <donor d_prob="0.964" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="0.91"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="69911" g_stop="69953" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="721" r_stop="763" r_length="43" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0059D21.1" gen_strand="+" ref_id="SGN-M7703" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0059D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-M7703" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67548" e_stop="67656"/>
          <exon e_start="67767" e_stop="67863"/>
          <exon e_start="67941" e_stop="68097"/>
          <exon e_start="68708" e_stop="68851"/>
          <exon e_start="68944" e_stop="69012"/>
          <exon e_start="69122" e_stop="69265"/>
          <exon e_start="69911" e_stop="69953"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACGAGGGAATTGACTTGACGCACAATCCTGAATTCACCACTTGCGAGTTTTATATGGCATATGCAGATTACAATGACTTGATGGAGCTAACTGAAAATATGCTAAGTGGTAAGTAACCAAAATATTTGGATCCAAATGTTGTGGGGGAAGCTTATGTATATTTAATCTTTTCATGATATTTATTCTTTTATTTTATATTACTGACCATACATGAACAGGGATGGTGAAGGAACTTACAGGTGGCTATATAATCAAGTATCATGCGAAAGGGTTGGAGAGTGACCCAATTGAAATTGACTTCACTCCTCCCTTCAGGTTTGGGAGCTTTTCTGGTTTGTCATGTTTTGGTTTAGTTTACAAGGCACTAAGATACTTATGCGTTGCTTCTGCAGACGGATTGATATGGTAGAGGAATTGGAGAAGATTGCAAACTTGAATATACCCAAGGATCTCTCAAGTGATGAAACCAACAAATATCTCATAGATGCTTGCGCGAAGTTTGAGATCAGATGTCCTCCACCTCTAACAACAACTAGATTACTTGATAAAGTAAATTTTCTTTCAGATATCTTCCGGATAGCCAATTTTTACATATGCAATCTAGTAACTTGCTTTTCCTGCTGATCCCCTTTTCTTTTGTATTGTCGCGCACTACCCTCTAGCGATATTGCAATGTTTGAGAAATTTTTTCAGTTTCTGGGCTTTGTGTTCTTCTGTTCTCTCCATGAGCAGTACTACATGAGGCAACAAAAAGGCTACTGTAAAGAGGAGGGTGGAGGGTAATAGGCAAATGTGAGAAAATAAAGAGGAAAGAAATAGAGATGAATAGGGTTGCTAGCGTTTTAGAGCTATATTAGTGTGAAATCTGTAGTTTGTGTGGCATTTGATCTATAACATGTGTTATTGCCAATAAATCTCATTGTTGATTGTTAAATTGGTTTAGAATCAATTGCTGTTTGTCTGCTTTTCGGCATGTAACATTATAAAATTGTTTAATGTTTGGTCCCATTTCTGCATTTATTGGTGATACCTCTTCAAAAAAACATGTACTAACAGGAATCAAGTGTTCTCATTCCTTTGGTGCTATTGGTAACAGTTTTTTGCCTAAGCAGCTTTATGACGTCGGAACTAAGTCTCCCTTCATTTTCTGTGAATTTAGCTTGTGGGACACTTTCTGGAGGAGACATGTGTTAACCCTACTTTCATTATCAACCATCCAGAGATAATGAGTCCTTTGGCAAAGTGGCACAGATCGAAACCAGGCCTGACAGAACGTTTTGAACTGTTTATAAACAAACATGAAGTATGCATTCTTTCAAATCTTTCAAAGTTCAAACTCTATATTACCATCCCAACACATGTTGTAATGTGCTTCTCTGTTAAATAACTTGACAGCTCTGTAATGCATACACCGAGTTGAATGACCCTGTTGTCCAACGCCAGCGCTTTGCTGATCAACTCAAGGTATTTGTGGGAAGTGTGCAACTTGACTTGGTGGTTGTTTGTGTTCATCTTGTTGTATCATTTCGATTATGTGCAACTACTTATTTAGGCATAATTAATGTCAATTCAGGACCGACAATCAGGTGATGATGAAGCTATGGCACTGGATGAGAACTTTTGCACCGCTCTTGAATATGGATTACCTCCTACTGGTGGTTGGGGATTGGGTATTGACCGACTTGCAATGTTGTTGACAGATTCACAAAACATTAAGGTTTGTGCCTTCACTTATTTAGTGAGGAAGAAATGACCACTTAGTTCCAAATGGCCGAGGGAATGGCCTGTTGTCTTCCTGATTCTTACATTATCTTCATCAATCTTCACCTCATTAGATAGCTTTTGAGGTTAATTTAGGCATTTTCTTAGCATGGTATTAGAGCCAGAGCAAAACTAATCCATGTTCTTGGTTTATCCAATGTTGAGCAATCATGTTGTATTGTCCGTGTTCCAGATGTTTCAACTCCTATGCATCTGGGTTAGTTACCATATCTTACATTTTTTTTTTTAAAAAAAATGGAATGCTGAGTTATACAATTTTAGCAAATTCTTACCTCATGATCTAGCTTTTGGGTTTTTTGTTAGACTCGAGGTTCTTTTATTTTAACTATGATGAAATGACCATTCATTTCCAATCAATTTCTCTGTTGTCCTGTTTGGCATCCATTTCTAAATGGTGGATGGAGGAGGGCATTCATAGAAGAGCCCACAAAGGCTGGTCTTCTACGAATTTAGTGTTGTCTCAGCATTCCCAACTCTCATTTTCTTGTCACTTCCTTTATGAGAAAGCTAGTGTTTCGTATTATTTTAGTTAGATACTGAAATCGATTTTTCTTTCCCTTGTTATACTTTTTTTCTACAGGAAGTTCTTCTCTTTCCAGCCATGAAGCCACAGGATGAGCCAA</genome_strand>
        <mrna_strand>CCCCCGGGCTGCAGGTTGACGCACAATCCTGAATTCACCACTTGCGAGTTTTACATGGCATATGCAGATTACAATGACTTGATGGATCTAACTGAGAAAATGCTAAGTG..............................................................................................................AGATGGTGAAGGAACTTACAGGTGGCTATATAATCAAGTATCATGCGAAGGGGTTTGAGAGTGACCCAATTGAAATCGACTTCACTCCTCCCTTCAG.............................................................................AAGGATTGATATGGTAGAGGAATTGGAGAAGATTGCAAACTTGAATATACCCAAGGATCTCTCAAGTGATGAAACCAACAAATATCTCATAGATGCTTGTTCAAAGTTTGAGATCAGATGTCCTCCACCCCAAACAACAGCTAGATTACTTGACAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTGGGACACTTTCTGGAGGAGACATGTGTTAACCCTACTTTCATTATCAACCATCCAGAGATAATGAGTCCTTTGGCAAAGTGGCACAGATCGAAACCAGGCCTGACAGAACGTTTTGAACTGTTTATAAACAAACATGAA............................................................................................CTTTGCAATGCATACACCGAGTTGAATGACCCTGTTGTCCAACGACAGCGCTTTGCTGATCAACTCAAG.............................................................................................................GACCGACAATCAGGTGATGATGAAGCTATGGCACTGGATGAAAACTTTTGCACAGCTCTTGAATATGGATTACCTCCTACTGGTGGTTGGGGATTGGGTATTGACCGACTTGCAATGTTGCTGACAGATTCACAAAACATCAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTTCTACTCTTTCCAGCTATGAAGCCACAGGATGACCCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>7</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="10478" PGL_stop="6814"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="10478" e_stop="10393"/>
            <exon e_start="8793" e_stop="8668"/>
            <exon e_start="7897" e_stop="7770"/>
            <exon e_start="7247" e_stop="6814"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.968" acc_prob="0.990" e_score="0.953"/>
          <exon-intron don_prob="0.838" acc_prob="0.849" e_score="1.000"/>
          <exon-intron don_prob="0.930" acc_prob="0.999" e_score="0.969"/>
          <exon-only e_score="0.922"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.953">
            <gDNA_exon_boundary e_start="10478" e_stop="10393" e_length="86"/>
          </exon>
          <intron i_serial="1" don_prob="0.968" acc_prob="0.990">
            <gDNA_intron_boundary i_start="10392" i_stop="8794" i_length="1599"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="8793" e_stop="8668" e_length="126"/>
          </exon>
          <intron i_serial="2" don_prob="0.838" acc_prob="0.849">
            <gDNA_intron_boundary i_start="8667" i_stop="7898" i_length="770"/>
          </intron>
          <exon e_serial="3" e_score="0.969">
            <gDNA_exon_boundary e_start="7897" e_stop="7770" e_length="128"/>
          </exon>
          <intron i_serial="3" don_prob="0.930" acc_prob="0.999">
            <gDNA_intron_boundary i_start="7769" i_stop="7248" i_length="522"/>
          </intron>
          <exon e_serial="4" e_score="0.922">
            <gDNA_exon_boundary e_start="7247" e_stop="6814" e_length="434"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10478" stop="10393"/>
              <exon start="8793" stop="8668"/>
              <exon start="7897" stop="7770"/>
              <exon start="7247" stop="6814"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M7366" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAGCTGGAGGATTTATTGGATGCGTTTGCTGACAGAGTCTCTAAACCTCGCCTCTTTATGACAGACAAGATGCAAATTGCTCTTG : CTGGGGGTTTGGGACATGGTGTGGCTCATGCTGTGTTTTTCTGCCTTGGCCTTTTGACACCTGCATTTGGACCAGCGACATACTATGTAGAGAAATGCTCAAAGATACCCTTTTTTCTTGTTTCTG : CTATTATAGCCCTTGCCTTTGCTACCATCCACACTTTCTCCATGGTTATTGCATTCAGTGGATATGAAGAAGGAAACAAAGTGGACCAGTGTTTCGCTCCTGTTGTTCACTTAATTGCTGGCATGTTG : ACACTGACGAATCTTGCATTTGGAGGCTGCATGATTGGCATTCCACTCCTCTATTGTGTAGCAATCGTGACCTTGGTACATTGCGGAAAGATGGCATGGAGGAGATTGATAGAAAGCCGAAACAGGGAGGGGAACTTCAGCAATAGCCAATAAGCAAGGATAATAACCTTTTTTGTATTACTGAGAAGTGTAAGATTAGTAATTGCCAGATATATCTAATGCTTGGAGCATTTGCCAAGGGTGACTCAAAGAAGAGACTAGTAAATCTTTTGTTTTAGGCCTCCAAAAATATTTCATAGTCAACTTTATATTGGCCAAATAAATATTCGGGCCACTCAAACTTTACATGAATTTTCGTTGTAACACCTAACATTTGCCTTGTACCTATTGAACACCTAATATTACAAGAATTTATGTCTATTCAATAATCGTAC</gDNA_template>
            <first_frame> E  A  G  G  F  I  G  C  V  C  *  Q  S  L  *  T  S  P  L  Y  D  R  Q  D  A  N  C  S  C :   W  G  F  G  T  W  C  G  S  C  C  V  F  L  P  W  P  F  D  T  C  I  W  T  S  D  I  L  C  R  E  M  L  K  D  T  L  F  S  C  F  C :   Y  Y  S  P  C  L  C  Y  H  P  H  F  L  H  G  Y  C  I  Q  W  I  *  R  R  K  Q  S  G  P  V  F  R  S  C  C  S  L  N  C  W  H  V   : D  T  D  E  S  C  I  W  R  L  H  D  W  H  S  T  P  L  L  C  S  N  R  D  L  G  T  L  R  K  D  G  M  E  E  I  D  R  K  P  K  Q  G  G  E  L  Q  Q  *  P  I  S  K  D  N  N  L  F  C  I  T  E  K  C  K  I  S  N  C  Q  I  Y  L  M  L  G  A  F  A  K  G  D  S  K  K  R  L  V  N  L  L  F  *  A  S  K  N  I  S  *  S  T  L  Y  W  P  N  K  Y  S  G  H  S  N  F  T  *  I  F  V  V  T  P  N  I  C  L  V  P  I  E  H  L  I  L  Q  E  F  M  S  I  Q  *  S  Y </first_frame>
            <second_frame>  K  L  E  D  L  L  D  A  F  A  D  R  V  S  K  P  R  L  F  M  T  D  K  M  Q  I  A  L   : A  G  G  L  G  H  G  V  A  H  A  V  F  F  C  L  G  L  L  T  P  A  F  G  P  A  T  Y  Y  V  E  K  C  S  K  I  P  F  F  L  V  S   : A  I  I  A  L  A  F  A  T  I  H  T  F  S  M  V  I  A  F  S  G  Y  E  E  G  N  K  V  D  Q  C  F  A  P  V  V  H  L  I  A  G  M  L  :  T  L  T  N  L  A  F  G  G  C  M  I  G  I  P  L  L  Y  C  V  A  I  V  T  L  V  H  C  G  K  M  A  W  R  R  L  I  E  S  R  N  R  E  G  N  F  S  N  S  Q  *  A  R  I  I  T  F  F  V  L  L  R  S  V  R  L  V  I  A  R  Y  I  *  C  L  E  H  L  P  R  V  T  Q  R  R  D  *  *  I  F  C  F  R  P  P  K  I  F  H  S  Q  L  Y  I  G  Q  I  N  I  R  A  T  Q  T  L  H  E  F  S  L  *  H  L  T  F  A  L  Y  L  L  N  T  *  Y  Y  K  N  L  C  L  F  N  N  R   </second_frame>
            <third_frame>   S  W  R  I  Y  W  M  R  L  L  T  E  S  L  N  L  A  S  L  *  Q  T  R  C  K  L  L  L  :  L  G  V  W  D  M  V  W  L  M  L  C  F  S  A  L  A  F  *  H  L  H  L  D  Q  R  H  T  M  *  R  N  A  Q  R  Y  P  F  F  L  F  L  :  L  L  *  P  L  P  L  L  P  S  T  L  S  P  W  L  L  H  S  V  D  M  K  K  E  T  K  W  T  S  V  S  L  L  L  F  T  *  L  L  A  C  * :   H  *  R  I  L  H  L  E  A  A  *  L  A  F  H  S  S  I  V  *  Q  S  *  P  W  Y  I  A  E  R  W  H  G  G  D  *  *  K  A  E  T  G  R  G  T  S  A  I  A  N  K  Q  G  *  *  P  F  L  Y  Y  *  E  V  *  D  *  *  L  P  D  I  S  N  A  W  S  I  C  Q  G  *  L  K  E  E  T  S  K  S  F  V  L  G  L  Q  K  Y  F  I  V  N  F  I  L  A  K  *  I  F  G  P  L  K  L  Y  M  N  F  R  C  N  T  *  H  L  P  C  T  Y  *  T  P  N  I  T  R  I  Y  V  Y  S  I  I  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0059D21.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10477" stop="10393"/>
                    <exon start="8793" stop="8668"/>
                    <exon start="7897" stop="7770"/>
                    <exon start="7247" stop="7095"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>489</number_coding_nucleotides>
                  <number_encoded_amino_acids>163</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLEDLLDAFADRVSKPRLFMTDKMQIALAGGLGHGVAHAVFFCLGLLTPAFGPATYYVEKCSKIPFFLVSAIIALAFATIHTFSMVIAFSGYEEGNKVDQCFAPVVHLIAGMLTLTNLAFGGCMIGIPLLYCVAIVTLVHCGKMAWRRLIESRNREGNFSNSQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="64375" PGL_stop="71969"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64375" e_stop="64605"/>
            <exon e_start="65164" e_stop="65332"/>
            <exon e_start="65436" e_stop="65529"/>
            <exon e_start="65618" e_stop="65703"/>
            <exon e_start="66777" e_stop="66886"/>
            <exon e_start="66961" e_stop="67023"/>
            <exon e_start="67148" e_stop="67273"/>
            <exon e_start="67374" e_stop="67656"/>
            <exon e_start="67767" e_stop="67863"/>
            <exon e_start="67941" e_stop="68097"/>
            <exon e_start="68708" e_stop="68851"/>
            <exon e_start="68944" e_stop="69012"/>
            <exon e_start="69122" e_stop="69265"/>
            <exon e_start="69911" e_stop="69966"/>
            <exon e_start="71496" e_stop="71553"/>
            <exon e_start="71705" e_stop="71960"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.960" e_score="0.981"/>
          <exon-intron don_prob="0.995" acc_prob="0.950" e_score="0.982"/>
          <exon-intron don_prob="0.971" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.549" acc_prob="0.964" e_score="0.977"/>
          <exon-intron don_prob="0.987" acc_prob="0.983" e_score="0.991"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="0.952"/>
          <exon-intron don_prob="0.977" acc_prob="1.000" e_score="0.984"/>
          <exon-intron don_prob="0.690" acc_prob="0.999" e_score="0.982"/>
          <exon-intron don_prob="0.919" acc_prob="0.999" e_score="0.990"/>
          <exon-intron don_prob="0.647" acc_prob="0.458" e_score="0.975"/>
          <exon-intron don_prob="0.986" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.894" acc_prob="0.997" e_score="0.971"/>
          <exon-intron don_prob="0.964" acc_prob="0.996" e_score="0.986"/>
          <exon-intron don_prob="1.000" acc_prob="0.000" e_score="0.964"/>
          <exon-intron don_prob="0.996" acc_prob="0.992" e_score="0.759"/>
          <exon-only e_score="0.867"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.981">
            <gDNA_exon_boundary e_start="64375" e_stop="64605" e_length="231"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.960">
            <gDNA_intron_boundary i_start="64606" i_stop="65163" i_length="558"/>
          </intron>
          <exon e_serial="2" e_score="0.982">
            <gDNA_exon_boundary e_start="65164" e_stop="65332" e_length="169"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.950">
            <gDNA_intron_boundary i_start="65333" i_stop="65435" i_length="103"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="65436" e_stop="65529" e_length="94"/>
          </exon>
          <intron i_serial="3" don_prob="0.971" acc_prob="0.995">
            <gDNA_intron_boundary i_start="65530" i_stop="65617" i_length="88"/>
          </intron>
          <exon e_serial="4" e_score="0.977">
            <gDNA_exon_boundary e_start="65618" e_stop="65703" e_length="86"/>
          </exon>
          <intron i_serial="4" don_prob="0.549" acc_prob="0.964">
            <gDNA_intron_boundary i_start="65704" i_stop="66776" i_length="1073"/>
          </intron>
          <exon e_serial="5" e_score="0.991">
            <gDNA_exon_boundary e_start="66777" e_stop="66886" e_length="110"/>
          </exon>
          <intron i_serial="5" don_prob="0.987" acc_prob="0.983">
            <gDNA_intron_boundary i_start="66887" i_stop="66960" i_length="74"/>
          </intron>
          <exon e_serial="6" e_score="0.952">
            <gDNA_exon_boundary e_start="66961" e_stop="67023" e_length="63"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="67024" i_stop="67147" i_length="124"/>
          </intron>
          <exon e_serial="7" e_score="0.984">
            <gDNA_exon_boundary e_start="67148" e_stop="67273" e_length="126"/>
          </exon>
          <intron i_serial="7" don_prob="0.977" acc_prob="1.000">
            <gDNA_intron_boundary i_start="67274" i_stop="67373" i_length="100"/>
          </intron>
          <exon e_serial="8" e_score="0.982">
            <gDNA_exon_boundary e_start="67374" e_stop="67656" e_length="283"/>
          </exon>
          <intron i_serial="8" don_prob="0.690" acc_prob="0.999">
            <gDNA_intron_boundary i_start="67657" i_stop="67766" i_length="110"/>
          </intron>
          <exon e_serial="9" e_score="0.990">
            <gDNA_exon_boundary e_start="67767" e_stop="67863" e_length="97"/>
          </exon>
          <intron i_serial="9" don_prob="0.919" acc_prob="0.999">
            <gDNA_intron_boundary i_start="67864" i_stop="67940" i_length="77"/>
          </intron>
          <exon e_serial="10" e_score="0.975">
            <gDNA_exon_boundary e_start="67941" e_stop="68097" e_length="157"/>
          </exon>
          <intron i_serial="10" don_prob="0.647" acc_prob="0.458">
            <gDNA_intron_boundary i_start="68098" i_stop="68707" i_length="610"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="68708" e_stop="68851" e_length="144"/>
          </exon>
          <intron i_serial="11" don_prob="0.986" acc_prob="0.982">
            <gDNA_intron_boundary i_start="68852" i_stop="68943" i_length="92"/>
          </intron>
          <exon e_serial="12" e_score="0.971">
            <gDNA_exon_boundary e_start="68944" e_stop="69012" e_length="69"/>
          </exon>
          <intron i_serial="12" don_prob="0.894" acc_prob="0.997">
            <gDNA_intron_boundary i_start="69013" i_stop="69121" i_length="109"/>
          </intron>
          <exon e_serial="13" e_score="0.986">
            <gDNA_exon_boundary e_start="69122" e_stop="69265" e_length="144"/>
          </exon>
          <intron i_serial="13" don_prob="0.964" acc_prob="0.996">
            <gDNA_intron_boundary i_start="69266" i_stop="69910" i_length="645"/>
          </intron>
          <exon e_serial="14" e_score="0.964">
            <gDNA_exon_boundary e_start="69911" e_stop="69966" e_length="56"/>
          </exon>
          <intron i_serial="14" don_prob="1.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="69967" i_stop="71495" i_length="1529"/>
          </intron>
          <exon e_serial="15" e_score="0.759">
            <gDNA_exon_boundary e_start="71496" e_stop="71553" e_length="58"/>
          </exon>
          <intron i_serial="15" don_prob="0.996" acc_prob="0.992">
            <gDNA_intron_boundary i_start="71554" i_stop="71704" i_length="151"/>
          </intron>
          <exon e_serial="16" e_score="0.867">
            <gDNA_exon_boundary e_start="71705" e_stop="71960" e_length="256"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64375" stop="64605"/>
              <exon start="65164" stop="65332"/>
              <exon start="65436" stop="65529"/>
              <exon start="65618" stop="65703"/>
              <exon start="66777" stop="66886"/>
              <exon start="66961" stop="67023"/>
              <exon start="67148" stop="67273"/>
              <exon start="67374" stop="67656"/>
              <exon start="67767" stop="67863"/>
              <exon start="67941" stop="68097"/>
              <exon start="68708" stop="68851"/>
              <exon start="68944" stop="69012"/>
              <exon start="69122" stop="69265"/>
              <exon start="69911" stop="69966"/>
              <exon start="71496" stop="71553"/>
              <exon start="71705" stop="71960"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M7703-3" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64399" stop="64605"/>
              <exon start="65164" stop="65332"/>
              <exon start="65436" stop="65529"/>
              <exon start="65618" stop="65703"/>
              <exon start="66777" stop="66799"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M1885" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67548" stop="67656"/>
              <exon start="67767" stop="67863"/>
              <exon start="67941" stop="68097"/>
              <exon start="68708" stop="68851"/>
              <exon start="68944" stop="69012"/>
              <exon start="69122" stop="69265"/>
              <exon start="69911" stop="69953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M7703" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CACAAATACGCTAAAACCCTAGCCTCCATATCCATTTCCCTTTCAGCTCTACACTCTGCCTCTGTTTTTACAGTTACACTTGCATCAACAAATTGTCGGCTGCTCCGGTCGCCGCCGTCAGCAATGGGGAAATCAGAAAAAAAGCCAGCCTCTCAGCCCCAGAAAGTGGAGAAGAAGCCAGCTGCTCAGTCACAGAAGAATTCTGCAGCCGATGATGACATGGATCCAACG : CAATACTTCGAAAATAGGCTGAAAGCACTTGCAGCTGAAAAGGAAAATGGGCAGAACCCTTACCCACACAAATTCCAAGGGGAAAACCATATGTCTATCCCTAAATTTGTCAATAAATACGGAGTTTTAGAGAGTGGAGTTCACTCCGAAGATGAAGTGTCCTTGACTG : GAAGGATAATGAACAAACGTGCCTCTTCTGCAAAGCTGCTTTTCTATGATTTACATGGTGAAGGTGCCAAAGTTCAAGTCATGACAAGTGCAAG : AGATTCTGTGTTGAATGAAGAAGACTTCATTAAATTTCATTCTGGTGTGAAGCGTGGTGATATTGTAGGAATTACTGGATGTCCAG : GTAAGAGTAAAAGGGGAGAGCTGAGTATTTTTCCCAAATCATTCATAGTGTTATCTCACTGTCTTCATATGATGCCACGGCAGAAAGGTGCCCAGACAGAGACAGCTAAG : AATCCTGAAGCATGGGTCCCCGGAAGTGGCCGCAATCCAGATTCGTATGTGTTAAAGGATCAG : GAAACACGATATAGACAGCGTTATTTGGATTTGATGCTGAACTTAGAGGTCCGCCACATATTTAAAACCCGTGCAAAGATCATAACTTTTATTCGAAGCTTTCTTGATAACCGTGACTTCCTAGAG : GTAGAGACCCCCATGATGAACATGATTGCTGGTGGGGCAGCTGCACGTCCATTTGTGACCCACCACAATGATTTGAATATGAGGCTTTTCATGCGTATTGCTCCTGAACTCTATCTTAAAGAGCTGGTTGTTGGTGGCTTGGATCGTGTCTATGAGATTGGGAAACAATTTAGAAACGAGGGAATTGACTTGACGCACAATCCTGAATTCACCACTTGCGAGTTTTATATGGCATATGCAGATTACAATGACTTGATGGAGCTAACTGAAAATATGCTAAGTG : GGATGGTGAAGGAACTTACAGGTGGCTATATAATCAAGTATCATGCGAAAGGGTTGGAGAGTGACCCAATTGAAATTGACTTCACTCCTCCCTTCAG : ACGGATTGATATGGTAGAGGAATTGGAGAAGATTGCAAACTTGAATATACCCAAGGATCTCTCAAGTGATGAAACCAACAAATATCTCATAGATGCTTGCGCGAAGTTTGAGATCAGATGTCCTCCACCTCTAACAACAACTAGATTACTTGATAAA : CTTGTGGGACACTTTCTGGAGGAGACATGTGTTAACCCTACTTTCATTATCAACCATCCAGAGATAATGAGTCCTTTGGCAAAGTGGCACAGATCGAAACCAGGCCTGACAGAACGTTTTGAACTGTTTATAAACAAACATGAA : CTCTGTAATGCATACACCGAGTTGAATGACCCTGTTGTCCAACGCCAGCGCTTTGCTGATCAACTCAAG : GACCGACAATCAGGTGATGATGAAGCTATGGCACTGGATGAGAACTTTTGCACCGCTCTTGAATATGGATTACCTCCTACTGGTGGTTGGGGATTGGGTATTGACCGACTTGCAATGTTGTTGACAGATTCACAAAACATTAAG : GAAGTTCTTCTCTTTCCAGCCATGAAGCCACAGGATGAGCCAACTTCCAAGGAAAG : GAGGAAGCCAAGCCTCAGGATGGACAAGCCAAACCTCAGGATGAACTTACAATGAAAG : ATGTGGAAAAGCAGATTTCCGACATCAAAATGAACTGAATCAGATCATAGATATATTGACGCGGAGTTCCTGCTGCTCCAGGAGTACCATTTTTGTTATACCTTTTTTTTCTTTTACTATTTGATTAATGGTAATTGTCTATTGTAATGGCAAATGCTGTCTTTAATTCGTTAGTATCAGAAACTTTACTCGTATACTTATGAATATGGTTGTATTTGTCAAAATACTTTTAGATGTATTCATGATTATGCTCTCT</gDNA_template>
            <first_frame> H  K  Y  A  K  T  L  A  S  I  S  I  S  L  S  A  L  H  S  A  S  V  F  T  V  T  L  A  S  T  N  C  R  L  L  R  S  P  P  S  A  M  G  K  S  E  K  K  P  A  S  Q  P  Q  K  V  E  K  K  P  A  A  Q  S  Q  K  N  S  A  A  D  D  D  M  D  P  T  :  Q  Y  F  E  N  R  L  K  A  L  A  A  E  K  E  N  G  Q  N  P  Y  P  H  K  F  Q  G  E  N  H  M  S  I  P  K  F  V  N  K  Y  G  V  L  E  S  G  V  H  S  E  D  E  V  S  L  T   : G  R  I  M  N  K  R  A  S  S  A  K  L  L  F  Y  D  L  H  G  E  G  A  K  V  Q  V  M  T  S  A  R :   D  S  V  L  N  E  E  D  F  I  K  F  H  S  G  V  K  R  G  D  I  V  G  I  T  G  C  P   : G  K  S  K  R  G  E  L  S  I  F  P  K  S  F  I  V  L  S  H  C  L  H  M  M  P  R  Q  K  G  A  Q  T  E  T  A  K  :  N  P  E  A  W  V  P  G  S  G  R  N  P  D  S  Y  V  L  K  D  Q  :  E  T  R  Y  R  Q  R  Y  L  D  L  M  L  N  L  E  V  R  H  I  F  K  T  R  A  K  I  I  T  F  I  R  S  F  L  D  N  R  D  F  L  E  :  V  E  T  P  M  M  N  M  I  A  G  G  A  A  A  R  P  F  V  T  H  H  N  D  L  N  M  R  L  F  M  R  I  A  P  E  L  Y  L  K  E  L  V  V  G  G  L  D  R  V  Y  E  I  G  K  Q  F  R  N  E  G  I  D  L  T  H  N  P  E  F  T  T  C  E  F  Y  M  A  Y  A  D  Y  N  D  L  M  E  L  T  E  N  M  L  S   : G  M  V  K  E  L  T  G  G  Y  I  I  K  Y  H  A  K  G  L  E  S  D  P  I  E  I  D  F  T  P  P  F  R :   R  I  D  M  V  E  E  L  E  K  I  A  N  L  N  I  P  K  D  L  S  S  D  E  T  N  K  Y  L  I  D  A  C  A  K  F  E  I  R  C  P  P  P  L  T  T  T  R  L  L  D  K  :  L  V  G  H  F  L  E  E  T  C  V  N  P  T  F  I  I  N  H  P  E  I  M  S  P  L  A  K  W  H  R  S  K  P  G  L  T  E  R  F  E  L  F  I  N  K  H  E  :  L  C  N  A  Y  T  E  L  N  D  P  V  V  Q  R  Q  R  F  A  D  Q  L  K  :  D  R  Q  S  G  D  D  E  A  M  A  L  D  E  N  F  C  T  A  L  E  Y  G  L  P  P  T  G  G  W  G  L  G  I  D  R  L  A  M  L  L  T  D  S  Q  N  I  K  :  E  V  L  L  F  P  A  M  K  P  Q  D  E  P  T  S  K  E  R :   R  K  P  S  L  R  M  D  K  P  N  L  R  M  N  L  Q  *  K  :  M  W  K  S  R  F  P  T  S  K  *  T  E  S  D  H  R  Y  I  D  A  E  F  L  L  L  Q  E  Y  H  F  C  Y  T  F  F  F  F  Y  Y  L  I  N  G  N  C  L  L  *  W  Q  M  L  S  L  I  R  *  Y  Q  K  L  Y  S  Y  T  Y  E  Y  G  C  I  C  Q  N  T  F  R  C  I  H  D  Y  A  L  </first_frame>
            <second_frame>  T  N  T  L  K  P  *  P  P  Y  P  F  P  F  Q  L  Y  T  L  P  L  F  L  Q  L  H  L  H  Q  Q  I  V  G  C  S  G  R  R  R  Q  Q  W  G  N  Q  K  K  S  Q  P  L  S  P  R  K  W  R  R  S  Q  L  L  S  H  R  R  I  L  Q  P  M  M  T  W  I  Q  R :   N  T  S  K  I  G  *  K  H  L  Q  L  K  R  K  M  G  R  T  L  T  H  T  N  S  K  G  K  T  I  C  L  S  L  N  L  S  I  N  T  E  F  *  R  V  E  F  T  P  K  M  K  C  P  *  L  :  E  G  *  *  T  N  V  P  L  L  Q  S  C  F  S  M  I  Y  M  V  K  V  P  K  F  K  S  *  Q  V  Q   : E  I  L  C  *  M  K  K  T  S  L  N  F  I  L  V  *  S  V  V  I  L  *  E  L  L  D  V  Q  :  V  R  V  K  G  E  S  *  V  F  F  P  N  H  S  *  C  Y  L  T  V  F  I  *  C  H  G  R  K  V  P  R  Q  R  Q  L  R :   I  L  K  H  G  S  P  E  V  A  A  I  Q  I  R  M  C  *  R  I  R :   K  H  D  I  D  S  V  I  W  I  *  C  *  T  *  R  S  A  T  Y  L  K  P  V  Q  R  S  *  L  L  F  E  A  F  L  I  T  V  T  S  *  R :   *  R  P  P  *  *  T  *  L  L  V  G  Q  L  H  V  H  L  *  P  T  T  M  I  *  I  *  G  F  S  C  V  L  L  L  N  S  I  L  K  S  W  L  L  V  A  W  I  V  S  M  R  L  G  N  N  L  E  T  R  E  L  T  *  R  T  I  L  N  S  P  L  A  S  F  I  W  H  M  Q  I  T  M  T  *  W  S  *  L  K  I  C  *  V  :  G  W  *  R  N  L  Q  V  A  I  *  S  S  I  M  R  K  G  W  R  V  T  Q  L  K  L  T  S  L  L  P  S   : D  G  L  I  W  *  R  N  W  R  R  L  Q  T  *  I  Y  P  R  I  S  Q  V  M  K  P  T  N  I  S  *  M  L  A  R  S  L  R  S  D  V  L  H  L  *  Q  Q  L  D  Y  L  I  N :   L  W  D  T  F  W  R  R  H  V  L  T  L  L  S  L  S  T  I  Q  R  *  *  V  L  W  Q  S  G  T  D  R  N  Q  A  *  Q  N  V  L  N  C  L  *  T  N  M  N :   S  V  M  H  T  P  S  *  M  T  L  L  S  N  A  S  A  L  L  I  N  S  R :   T  D  N  Q  V  M  M  K  L  W  H  W  M  R  T  F  A  P  L  L  N  M  D  Y  L  L  L  V  V  G  D  W  V  L  T  D  L  Q  C  C  *  Q  I  H  K  T  L  R :   K  F  F  S  F  Q  P  *  S  H  R  M  S  Q  L  P  R  K   : G  G  S  Q  A  S  G  W  T  S  Q  T  S  G  *  T  Y  N  E  R :   C  G  K  A  D  F  R  H  Q  N  E  L  N  Q  I  I  D  I  L  T  R  S  S  C  C  S  R  S  T  I  F  V  I  P  F  F  S  F  T  I  *  L  M  V  I  V  Y  C  N  G  K  C  C  L  *  F  V  S  I  R  N  F  T  R  I  L  M  N  M  V  V  F  V  K  I  L  L  D  V  F  M  I  M  L  S </second_frame>
            <third_frame>   Q  I  R  *  N  P  S  L  H  I  H  F  P  F  S  S  T  L  C  L  C  F  Y  S  Y  T  C  I  N  K  L  S  A  A  P  V  A  A  V  S  N  G  E  I  R  K  K  A  S  L  S  A  P  E  S  G  E  E  A  S  C  S  V  T  E  E  F  C  S  R  *  *  H  G  S  N   : A  I  L  R  K  *  A  E  S  T  C  S  *  K  G  K  W  A  E  P  L  P  T  Q  I  P  R  G  K  P  Y  V  Y  P  *  I  C  Q  *  I  R  S  F  R  E  W  S  S  L  R  R  *  S  V  L  D  W :   K  D  N  E  Q  T  C  L  F  C  K  A  A  F  L  *  F  T  W  *  R  C  Q  S  S  S  H  D  K  C  K  :  R  F  C  V  E  *  R  R  L  H  *  I  S  F  W  C  E  A  W  *  Y  C  R  N  Y  W  M  S  R :   *  E  *  K  G  R  A  E  Y  F  S  Q  I  I  H  S  V  I  S  L  S  S  Y  D  A  T  A  E  R  C  P  D  R  D  S  *   : E  S  *  S  M  G  P  R  K  W  P  Q  S  R  F  V  C  V  K  G  S   : G  N  T  I  *  T  A  L  F  G  F  D  A  E  L  R  G  P  P  H  I  *  N  P  C  K  D  H  N  F  Y  S  K  L  S  *  *  P  *  L  P  R   : G  R  D  P  H  D  E  H  D  C  W  W  G  S  C  T  S  I  C  D  P  P  Q  *  F  E  Y  E  A  F  H  A  Y  C  S  *  T  L  S  *  R  A  G  C  W  W  L  G  S  C  L  *  D  W  E  T  I  *  K  R  G  N  *  L  D  A  Q  S  *  I  H  H  L  R  V  L  Y  G  I  C  R  L  Q  *  L  D  G  A  N  *  K  Y  A  K  W :   D  G  E  G  T  Y  R  W  L  Y  N  Q  V  S  C  E  R  V  G  E  *  P  N  *  N  *  L  H  S  S  L  Q  :  T  D  *  Y  G  R  G  I  G  E  D  C  K  L  E  Y  T  Q  G  S  L  K  *  *  N  Q  Q  I  S  H  R  C  L  R  E  V  *  D  Q  M  S  S  T  S  N  N  N  *  I  T  *  *   : T  C  G  T  L  S  G  G  D  M  C  *  P  Y  F  H  Y  Q  P  S  R  D  N  E  S  F  G  K  V  A  Q  I  E  T  R  P  D  R  T  F  *  T  V  Y  K  Q  T  *   : T  L  *  C  I  H  R  V  E  *  P  C  C  P  T  P  A  L  C  *  S  T  Q   : G  P  T  I  R  *  *  *  S  Y  G  T  G  *  E  L  L  H  R  S  *  I  W  I  T  S  Y  W  W  L  G  I  G  Y  *  P  T  C  N  V  V  D  R  F  T  K  H  *   : G  S  S  S  L  S  S  H  E  A  T  G  *  A  N  F  Q  G  K  :  E  E  A  K  P  Q  D  G  Q  A  K  P  Q  D  E  L  T  M  K   : D  V  E  K  Q  I  S  D  I  K  M  N  *  I  R  S  *  I  Y  *  R  G  V  P  A  A  P  G  V  P  F  L  L  Y  L  F  F  L  L  L  F  D  *  W  *  L  S  I  V  M  A  N  A  V  F  N  S  L  V  S  E  T  L  L  V  Y  L  *  I  W  L  Y  L  S  K  Y  F  *  M  Y  S  *  L  C  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0059D21.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64375" stop="64605"/>
                    <exon start="65164" stop="65332"/>
                    <exon start="65436" stop="65529"/>
                    <exon start="65618" stop="65703"/>
                    <exon start="66777" stop="66886"/>
                    <exon start="66961" stop="67023"/>
                    <exon start="67148" stop="67273"/>
                    <exon start="67374" stop="67656"/>
                    <exon start="67767" stop="67863"/>
                    <exon start="67941" stop="68097"/>
                    <exon start="68708" stop="68851"/>
                    <exon start="68944" stop="69012"/>
                    <exon start="69122" stop="69265"/>
                    <exon start="69911" stop="69966"/>
                    <exon start="71496" stop="71550"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1881</number_coding_nucleotides>
                  <number_encoded_amino_acids>627</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HKYAKTLASISISLSALHSASVFTVTLASTNCRLLRSPPSAMGKSEKKPASQPQKVEKKPAAQSQKNSAADDDMDPTQYFENRLKALAAEKENGQNPYPHKFQGENHMSIPKFVNKYGVLESGVHSEDEVSLTGRIMNKRASSAKLLFYDLHGEGAKVQVMTSARDSVLNEEDFIKFHSGVKRGDIVGITGCPGKSKRGELSIFPKSFIVLSHCLHMMPRQKGAQTETAKNPEAWVPGSGRNPDSYVLKDQETRYRQRYLDLMLNLEVRHIFKTRAKIITFIRSFLDNRDFLEVETPMMNMIAGGAAARPFVTHHNDLNMRLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAYADYNDLMELTENMLSGMVKELTGGYIIKYHAKGLESDPIEIDFTPPFRRIDMVEELEKIANLNIPKDLSSDETNKYLIDACAKFEIRCPPPLTTTRLLDKLVGHFLEETCVNPTFIINHPEIMSPLAKWHRSKPGLTERFELFINKHELCNAYTELNDPVVQRQRFADQLKDRQSGDDEAMALDENFCTALEYGLPPTGGWGLGIDRLAMLLTDSQNIKEVLLFPAMKPQDEPTSKERRKPSLRMDKPNLRMNLQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="64394" e_stop="64605"/>
            <exon e_start="65164" e_stop="65332"/>
            <exon e_start="65436" e_stop="65529"/>
            <exon e_start="65618" e_stop="65703"/>
            <exon e_start="66777" e_stop="66886"/>
            <exon e_start="66961" e_stop="67023"/>
            <exon e_start="67148" e_stop="67273"/>
            <exon e_start="67374" e_stop="67656"/>
            <exon e_start="67767" e_stop="67863"/>
            <exon e_start="67941" e_stop="68097"/>
            <exon e_start="68708" e_stop="68851"/>
            <exon e_start="68944" e_stop="69012"/>
            <exon e_start="69122" e_stop="69265"/>
            <exon e_start="69911" e_stop="69966"/>
            <exon e_start="71480" e_stop="71553"/>
            <exon e_start="71705" e_stop="71969"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.960" e_score="0.995"/>
          <exon-intron don_prob="0.995" acc_prob="0.950" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.549" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.690" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.919" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.647" acc_prob="0.458" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.894" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.594" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="64394" e_stop="64605" e_length="212"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.960">
            <gDNA_intron_boundary i_start="64606" i_stop="65163" i_length="558"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="65164" e_stop="65332" e_length="169"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.950">
            <gDNA_intron_boundary i_start="65333" i_stop="65435" i_length="103"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="65436" e_stop="65529" e_length="94"/>
          </exon>
          <intron i_serial="3" don_prob="0.971" acc_prob="0.995">
            <gDNA_intron_boundary i_start="65530" i_stop="65617" i_length="88"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="65618" e_stop="65703" e_length="86"/>
          </exon>
          <intron i_serial="4" don_prob="0.549" acc_prob="0.964">
            <gDNA_intron_boundary i_start="65704" i_stop="66776" i_length="1073"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="66777" e_stop="66886" e_length="110"/>
          </exon>
          <intron i_serial="5" don_prob="0.987" acc_prob="0.983">
            <gDNA_intron_boundary i_start="66887" i_stop="66960" i_length="74"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="66961" e_stop="67023" e_length="63"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="67024" i_stop="67147" i_length="124"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="67148" e_stop="67273" e_length="126"/>
          </exon>
          <intron i_serial="7" don_prob="0.977" acc_prob="1.000">
            <gDNA_intron_boundary i_start="67274" i_stop="67373" i_length="100"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="67374" e_stop="67656" e_length="283"/>
          </exon>
          <intron i_serial="8" don_prob="0.690" acc_prob="0.999">
            <gDNA_intron_boundary i_start="67657" i_stop="67766" i_length="110"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="67767" e_stop="67863" e_length="97"/>
          </exon>
          <intron i_serial="9" don_prob="0.919" acc_prob="0.999">
            <gDNA_intron_boundary i_start="67864" i_stop="67940" i_length="77"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="67941" e_stop="68097" e_length="157"/>
          </exon>
          <intron i_serial="10" don_prob="0.647" acc_prob="0.458">
            <gDNA_intron_boundary i_start="68098" i_stop="68707" i_length="610"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="68708" e_stop="68851" e_length="144"/>
          </exon>
          <intron i_serial="11" don_prob="0.986" acc_prob="0.982">
            <gDNA_intron_boundary i_start="68852" i_stop="68943" i_length="92"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="68944" e_stop="69012" e_length="69"/>
          </exon>
          <intron i_serial="12" don_prob="0.894" acc_prob="0.997">
            <gDNA_intron_boundary i_start="69013" i_stop="69121" i_length="109"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="69122" e_stop="69265" e_length="144"/>
          </exon>
          <intron i_serial="13" don_prob="0.964" acc_prob="0.996">
            <gDNA_intron_boundary i_start="69266" i_stop="69910" i_length="645"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="69911" e_stop="69966" e_length="56"/>
          </exon>
          <intron i_serial="14" don_prob="1.000" acc_prob="0.594">
            <gDNA_intron_boundary i_start="69967" i_stop="71479" i_length="1513"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="71480" e_stop="71553" e_length="74"/>
          </exon>
          <intron i_serial="15" don_prob="0.996" acc_prob="0.992">
            <gDNA_intron_boundary i_start="71554" i_stop="71704" i_length="151"/>
          </intron>
          <exon e_serial="16" e_score="0.996">
            <gDNA_exon_boundary e_start="71705" e_stop="71969" e_length="265"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64394" stop="64605"/>
              <exon start="65164" stop="65332"/>
              <exon start="65436" stop="65529"/>
              <exon start="65618" stop="65703"/>
              <exon start="66777" stop="66886"/>
              <exon start="66961" stop="67023"/>
              <exon start="67148" stop="67273"/>
              <exon start="67374" stop="67656"/>
              <exon start="67767" stop="67863"/>
              <exon start="67941" stop="68097"/>
              <exon start="68708" stop="68851"/>
              <exon start="68944" stop="69012"/>
              <exon start="69122" stop="69265"/>
              <exon start="69911" stop="69966"/>
              <exon start="71480" stop="71553"/>
              <exon start="71705" stop="71969"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M7703-2" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64399" stop="64605"/>
              <exon start="65164" stop="65332"/>
              <exon start="65436" stop="65529"/>
              <exon start="65618" stop="65703"/>
              <exon start="66777" stop="66799"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M1885" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67548" stop="67656"/>
              <exon start="67767" stop="67863"/>
              <exon start="67941" stop="68097"/>
              <exon start="68708" stop="68851"/>
              <exon start="68944" stop="69012"/>
              <exon start="69122" stop="69265"/>
              <exon start="69911" stop="69953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M7703" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGCCTCCATATCCATTTCCCTTTCAGCTCTACACTCTGCCTCTGTTTTTACAGTTACACTTGCATCAACAAATTGTCGGCTGCTCCGGTCGCCGCCGTCAGCAATGGGGAAATCAGAAAAAAAGCCAGCCTCTCAGCCCCAGAAAGTGGAGAAGAAGCCAGCTGCTCAGTCACAGAAGAATTCTGCAGCCGATGATGACATGGATCCAACG : CAATACTTCGAAAATAGGCTGAAAGCACTTGCAGCTGAAAAGGAAAATGGGCAGAACCCTTACCCACACAAATTCCAAGGGGAAAACCATATGTCTATCCCTAAATTTGTCAATAAATACGGAGTTTTAGAGAGTGGAGTTCACTCCGAAGATGAAGTGTCCTTGACTG : GAAGGATAATGAACAAACGTGCCTCTTCTGCAAAGCTGCTTTTCTATGATTTACATGGTGAAGGTGCCAAAGTTCAAGTCATGACAAGTGCAAG : AGATTCTGTGTTGAATGAAGAAGACTTCATTAAATTTCATTCTGGTGTGAAGCGTGGTGATATTGTAGGAATTACTGGATGTCCAG : GTAAGAGTAAAAGGGGAGAGCTGAGTATTTTTCCCAAATCATTCATAGTGTTATCTCACTGTCTTCATATGATGCCACGGCAGAAAGGTGCCCAGACAGAGACAGCTAAG : AATCCTGAAGCATGGGTCCCCGGAAGTGGCCGCAATCCAGATTCGTATGTGTTAAAGGATCAG : GAAACACGATATAGACAGCGTTATTTGGATTTGATGCTGAACTTAGAGGTCCGCCACATATTTAAAACCCGTGCAAAGATCATAACTTTTATTCGAAGCTTTCTTGATAACCGTGACTTCCTAGAG : GTAGAGACCCCCATGATGAACATGATTGCTGGTGGGGCAGCTGCACGTCCATTTGTGACCCACCACAATGATTTGAATATGAGGCTTTTCATGCGTATTGCTCCTGAACTCTATCTTAAAGAGCTGGTTGTTGGTGGCTTGGATCGTGTCTATGAGATTGGGAAACAATTTAGAAACGAGGGAATTGACTTGACGCACAATCCTGAATTCACCACTTGCGAGTTTTATATGGCATATGCAGATTACAATGACTTGATGGAGCTAACTGAAAATATGCTAAGTG : GGATGGTGAAGGAACTTACAGGTGGCTATATAATCAAGTATCATGCGAAAGGGTTGGAGAGTGACCCAATTGAAATTGACTTCACTCCTCCCTTCAG : ACGGATTGATATGGTAGAGGAATTGGAGAAGATTGCAAACTTGAATATACCCAAGGATCTCTCAAGTGATGAAACCAACAAATATCTCATAGATGCTTGCGCGAAGTTTGAGATCAGATGTCCTCCACCTCTAACAACAACTAGATTACTTGATAAA : CTTGTGGGACACTTTCTGGAGGAGACATGTGTTAACCCTACTTTCATTATCAACCATCCAGAGATAATGAGTCCTTTGGCAAAGTGGCACAGATCGAAACCAGGCCTGACAGAACGTTTTGAACTGTTTATAAACAAACATGAA : CTCTGTAATGCATACACCGAGTTGAATGACCCTGTTGTCCAACGCCAGCGCTTTGCTGATCAACTCAAG : GACCGACAATCAGGTGATGATGAAGCTATGGCACTGGATGAGAACTTTTGCACCGCTCTTGAATATGGATTACCTCCTACTGGTGGTTGGGGATTGGGTATTGACCGACTTGCAATGTTGTTGACAGATTCACAAAACATTAAG : GAAGTTCTTCTCTTTCCAGCCATGAAGCCACAGGATGAGCCAACTTCCAAGGAAAG : CAATAAAAAACCTCAGGAGGAAGCCAAGCCTCAGGATGGACAAGCCAAACCTCAGGATGAACTTACAATGAAAG : ATGTGGAAAAGCAGATTTCCGACATCAAAATGAACTGAATCAGATCATAGATATATTGACGCGGAGTTCCTGCTGCTCCAGGAGTACCATTTTTGTTATACCTTTTTTTTCTTTTACTATTTGATTAATGGTAATTGTCTATTGTAATGGCAAATGCTGTCTTTAATTCGTTAGTATCAGAAACTTTACTCGTATACTTATGAATATGGTTGTATTTGTCAAAATACTTTTAGATGTATTCATGATTATGCTCTCTATTCCTTCC</gDNA_template>
            <first_frame> *  P  P  Y  P  F  P  F  Q  L  Y  T  L  P  L  F  L  Q  L  H  L  H  Q  Q  I  V  G  C  S  G  R  R  R  Q  Q  W  G  N  Q  K  K  S  Q  P  L  S  P  R  K  W  R  R  S  Q  L  L  S  H  R  R  I  L  Q  P  M  M  T  W  I  Q  R :   N  T  S  K  I  G  *  K  H  L  Q  L  K  R  K  M  G  R  T  L  T  H  T  N  S  K  G  K  T  I  C  L  S  L  N  L  S  I  N  T  E  F  *  R  V  E  F  T  P  K  M  K  C  P  *  L  :  E  G  *  *  T  N  V  P  L  L  Q  S  C  F  S  M  I  Y  M  V  K  V  P  K  F  K  S  *  Q  V  Q   : E  I  L  C  *  M  K  K  T  S  L  N  F  I  L  V  *  S  V  V  I  L  *  E  L  L  D  V  Q  :  V  R  V  K  G  E  S  *  V  F  F  P  N  H  S  *  C  Y  L  T  V  F  I  *  C  H  G  R  K  V  P  R  Q  R  Q  L  R :   I  L  K  H  G  S  P  E  V  A  A  I  Q  I  R  M  C  *  R  I  R :   K  H  D  I  D  S  V  I  W  I  *  C  *  T  *  R  S  A  T  Y  L  K  P  V  Q  R  S  *  L  L  F  E  A  F  L  I  T  V  T  S  *  R :   *  R  P  P  *  *  T  *  L  L  V  G  Q  L  H  V  H  L  *  P  T  T  M  I  *  I  *  G  F  S  C  V  L  L  L  N  S  I  L  K  S  W  L  L  V  A  W  I  V  S  M  R  L  G  N  N  L  E  T  R  E  L  T  *  R  T  I  L  N  S  P  L  A  S  F  I  W  H  M  Q  I  T  M  T  *  W  S  *  L  K  I  C  *  V  :  G  W  *  R  N  L  Q  V  A  I  *  S  S  I  M  R  K  G  W  R  V  T  Q  L  K  L  T  S  L  L  P  S   : D  G  L  I  W  *  R  N  W  R  R  L  Q  T  *  I  Y  P  R  I  S  Q  V  M  K  P  T  N  I  S  *  M  L  A  R  S  L  R  S  D  V  L  H  L  *  Q  Q  L  D  Y  L  I  N :   L  W  D  T  F  W  R  R  H  V  L  T  L  L  S  L  S  T  I  Q  R  *  *  V  L  W  Q  S  G  T  D  R  N  Q  A  *  Q  N  V  L  N  C  L  *  T  N  M  N :   S  V  M  H  T  P  S  *  M  T  L  L  S  N  A  S  A  L  L  I  N  S  R :   T  D  N  Q  V  M  M  K  L  W  H  W  M  R  T  F  A  P  L  L  N  M  D  Y  L  L  L  V  V  G  D  W  V  L  T  D  L  Q  C  C  *  Q  I  H  K  T  L  R :   K  F  F  S  F  Q  P  *  S  H  R  M  S  Q  L  P  R  K   : A  I  K  N  L  R  R  K  P  S  L  R  M  D  K  P  N  L  R  M  N  L  Q  *  K  :  M  W  K  S  R  F  P  T  S  K  *  T  E  S  D  H  R  Y  I  D  A  E  F  L  L  L  Q  E  Y  H  F  C  Y  T  F  F  F  F  Y  Y  L  I  N  G  N  C  L  L  *  W  Q  M  L  S  L  I  R  *  Y  Q  K  L  Y  S  Y  T  Y  E  Y  G  C  I  C  Q  N  T  F  R  C  I  H  D  Y  A  L  Y  S  F  </first_frame>
            <second_frame>  S  L  H  I  H  F  P  F  S  S  T  L  C  L  C  F  Y  S  Y  T  C  I  N  K  L  S  A  A  P  V  A  A  V  S  N  G  E  I  R  K  K  A  S  L  S  A  P  E  S  G  E  E  A  S  C  S  V  T  E  E  F  C  S  R  *  *  H  G  S  N   : A  I  L  R  K  *  A  E  S  T  C  S  *  K  G  K  W  A  E  P  L  P  T  Q  I  P  R  G  K  P  Y  V  Y  P  *  I  C  Q  *  I  R  S  F  R  E  W  S  S  L  R  R  *  S  V  L  D  W :   K  D  N  E  Q  T  C  L  F  C  K  A  A  F  L  *  F  T  W  *  R  C  Q  S  S  S  H  D  K  C  K  :  R  F  C  V  E  *  R  R  L  H  *  I  S  F  W  C  E  A  W  *  Y  C  R  N  Y  W  M  S  R :   *  E  *  K  G  R  A  E  Y  F  S  Q  I  I  H  S  V  I  S  L  S  S  Y  D  A  T  A  E  R  C  P  D  R  D  S  *   : E  S  *  S  M  G  P  R  K  W  P  Q  S  R  F  V  C  V  K  G  S   : G  N  T  I  *  T  A  L  F  G  F  D  A  E  L  R  G  P  P  H  I  *  N  P  C  K  D  H  N  F  Y  S  K  L  S  *  *  P  *  L  P  R   : G  R  D  P  H  D  E  H  D  C  W  W  G  S  C  T  S  I  C  D  P  P  Q  *  F  E  Y  E  A  F  H  A  Y  C  S  *  T  L  S  *  R  A  G  C  W  W  L  G  S  C  L  *  D  W  E  T  I  *  K  R  G  N  *  L  D  A  Q  S  *  I  H  H  L  R  V  L  Y  G  I  C  R  L  Q  *  L  D  G  A  N  *  K  Y  A  K  W :   D  G  E  G  T  Y  R  W  L  Y  N  Q  V  S  C  E  R  V  G  E  *  P  N  *  N  *  L  H  S  S  L  Q  :  T  D  *  Y  G  R  G  I  G  E  D  C  K  L  E  Y  T  Q  G  S  L  K  *  *  N  Q  Q  I  S  H  R  C  L  R  E  V  *  D  Q  M  S  S  T  S  N  N  N  *  I  T  *  *   : T  C  G  T  L  S  G  G  D  M  C  *  P  Y  F  H  Y  Q  P  S  R  D  N  E  S  F  G  K  V  A  Q  I  E  T  R  P  D  R  T  F  *  T  V  Y  K  Q  T  *   : T  L  *  C  I  H  R  V  E  *  P  C  C  P  T  P  A  L  C  *  S  T  Q   : G  P  T  I  R  *  *  *  S  Y  G  T  G  *  E  L  L  H  R  S  *  I  W  I  T  S  Y  W  W  L  G  I  G  Y  *  P  T  C  N  V  V  D  R  F  T  K  H  *   : G  S  S  S  L  S  S  H  E  A  T  G  *  A  N  F  Q  G  K  :  Q  *  K  T  S  G  G  S  Q  A  S  G  W  T  S  Q  T  S  G  *  T  Y  N  E  R :   C  G  K  A  D  F  R  H  Q  N  E  L  N  Q  I  I  D  I  L  T  R  S  S  C  C  S  R  S  T  I  F  V  I  P  F  F  S  F  T  I  *  L  M  V  I  V  Y  C  N  G  K  C  C  L  *  F  V  S  I  R  N  F  T  R  I  L  M  N  M  V  V  F  V  K  I  L  L  D  V  F  M  I  M  L  S  I  P  S </second_frame>
            <third_frame>   A  S  I  S  I  S  L  S  A  L  H  S  A  S  V  F  T  V  T  L  A  S  T  N  C  R  L  L  R  S  P  P  S  A  M  G  K  S  E  K  K  P  A  S  Q  P  Q  K  V  E  K  K  P  A  A  Q  S  Q  K  N  S  A  A  D  D  D  M  D  P  T  :  Q  Y  F  E  N  R  L  K  A  L  A  A  E  K  E  N  G  Q  N  P  Y  P  H  K  F  Q  G  E  N  H  M  S  I  P  K  F  V  N  K  Y  G  V  L  E  S  G  V  H  S  E  D  E  V  S  L  T   : G  R  I  M  N  K  R  A  S  S  A  K  L  L  F  Y  D  L  H  G  E  G  A  K  V  Q  V  M  T  S  A  R :   D  S  V  L  N  E  E  D  F  I  K  F  H  S  G  V  K  R  G  D  I  V  G  I  T  G  C  P   : G  K  S  K  R  G  E  L  S  I  F  P  K  S  F  I  V  L  S  H  C  L  H  M  M  P  R  Q  K  G  A  Q  T  E  T  A  K  :  N  P  E  A  W  V  P  G  S  G  R  N  P  D  S  Y  V  L  K  D  Q  :  E  T  R  Y  R  Q  R  Y  L  D  L  M  L  N  L  E  V  R  H  I  F  K  T  R  A  K  I  I  T  F  I  R  S  F  L  D  N  R  D  F  L  E  :  V  E  T  P  M  M  N  M  I  A  G  G  A  A  A  R  P  F  V  T  H  H  N  D  L  N  M  R  L  F  M  R  I  A  P  E  L  Y  L  K  E  L  V  V  G  G  L  D  R  V  Y  E  I  G  K  Q  F  R  N  E  G  I  D  L  T  H  N  P  E  F  T  T  C  E  F  Y  M  A  Y  A  D  Y  N  D  L  M  E  L  T  E  N  M  L  S   : G  M  V  K  E  L  T  G  G  Y  I  I  K  Y  H  A  K  G  L  E  S  D  P  I  E  I  D  F  T  P  P  F  R :   R  I  D  M  V  E  E  L  E  K  I  A  N  L  N  I  P  K  D  L  S  S  D  E  T  N  K  Y  L  I  D  A  C  A  K  F  E  I  R  C  P  P  P  L  T  T  T  R  L  L  D  K  :  L  V  G  H  F  L  E  E  T  C  V  N  P  T  F  I  I  N  H  P  E  I  M  S  P  L  A  K  W  H  R  S  K  P  G  L  T  E  R  F  E  L  F  I  N  K  H  E  :  L  C  N  A  Y  T  E  L  N  D  P  V  V  Q  R  Q  R  F  A  D  Q  L  K  :  D  R  Q  S  G  D  D  E  A  M  A  L  D  E  N  F  C  T  A  L  E  Y  G  L  P  P  T  G  G  W  G  L  G  I  D  R  L  A  M  L  L  T  D  S  Q  N  I  K  :  E  V  L  L  F  P  A  M  K  P  Q  D  E  P  T  S  K  E  S :   N  K  K  P  Q  E  E  A  K  P  Q  D  G  Q  A  K  P  Q  D  E  L  T  M  K   : D  V  E  K  Q  I  S  D  I  K  M  N  *  I  R  S  *  I  Y  *  R  G  V  P  A  A  P  G  V  P  F  L  L  Y  L  F  F  L  L  L  F  D  *  W  *  L  S  I  V  M  A  N  A  V  F  N  S  L  V  S  E  T  L  L  V  Y  L  *  I  W  L  Y  L  S  K  Y  F  *  M  Y  S  *  L  C  S  L  F  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0059D21.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64396" stop="64605"/>
                    <exon start="65164" stop="65332"/>
                    <exon start="65436" stop="65529"/>
                    <exon start="65618" stop="65703"/>
                    <exon start="66777" stop="66886"/>
                    <exon start="66961" stop="67023"/>
                    <exon start="67148" stop="67273"/>
                    <exon start="67374" stop="67656"/>
                    <exon start="67767" stop="67863"/>
                    <exon start="67941" stop="68097"/>
                    <exon start="68708" stop="68851"/>
                    <exon start="68944" stop="69012"/>
                    <exon start="69122" stop="69265"/>
                    <exon start="69911" stop="69966"/>
                    <exon start="71480" stop="71553"/>
                    <exon start="71705" stop="71742"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1917</number_coding_nucleotides>
                  <number_encoded_amino_acids>639</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ASISISLSALHSASVFTVTLASTNCRLLRSPPSAMGKSEKKPASQPQKVEKKPAAQSQKNSAADDDMDPTQYFENRLKALAAEKENGQNPYPHKFQGENHMSIPKFVNKYGVLESGVHSEDEVSLTGRIMNKRASSAKLLFYDLHGEGAKVQVMTSARDSVLNEEDFIKFHSGVKRGDIVGITGCPGKSKRGELSIFPKSFIVLSHCLHMMPRQKGAQTETAKNPEAWVPGSGRNPDSYVLKDQETRYRQRYLDLMLNLEVRHIFKTRAKIITFIRSFLDNRDFLEVETPMMNMIAGGAAARPFVTHHNDLNMRLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAYADYNDLMELTENMLSGMVKELTGGYIIKYHAKGLESDPIEIDFTPPFRRIDMVEELEKIANLNIPKDLSSDETNKYLIDACAKFEIRCPPPLTTTRLLDKLVGHFLEETCVNPTFIINHPEIMSPLAKWHRSKPGLTERFELFINKHELCNAYTELNDPVVQRQRFADQLKDRQSGDDEAMALDENFCTALEYGLPPTGGWGLGIDRLAMLLTDSQNIKEVLLFPAMKPQDEPTSKESNKKPQEEAKPQDGQAKPQDELTMKDVEKQISDIKMN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="65903" PGL_stop="65385"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65903" e_stop="65385"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="65903" e_stop="65385" e_length="519"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65903" stop="65391"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M490-R" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65854" stop="65385"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M490-F" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTACACCAATCCAATAAAATACATAAACATTGTGTTTTCAGTTCCTTTCCCCTGCATTAATTAATGGTGTTCAAGTACGTGATGGAGTGAGACTAAGAGTAACATTTCTCTTCTAATAGAACTTATTTGTACACCGCCAAGACCAACACTACCACAGATAACAACTGTCACTAAACTAACAGGAAATAAGAATCCCACACCTGGACATCCAGTAATTCCTACAATATCACCACGCTTCACACCAGAATGAAATTTAATGAAGTCTTCTTCATTCAACACAGAATCTCTGCAAATATATAAGGACATAATAATTCTCAATGAAAAGAAAATTCTATTTCTCACAAACAACAAAATGATAAGAGTAATAGAACCACCTTGCACTTGTCATGACTTGAACTTTGGCACCTTCACCATGTAAATCATAGAAAAGCAGCTTTGCAGAAGAGGCACGTTTGTTCATTATCCTTCCTATCGAAAAAAACAATCATTGATGCAAATTTATTTTTTTTAACAAAAAAC</gDNA_template>
            <first_frame> V  H  Q  S  N  K  I  H  K  H  C  V  F  S  S  F  P  L  H  *  L  M  V  F  K  Y  V  M  E  *  D  *  E  *  H  F  S  S  N  R  T  Y  L  Y  T  A  K  T  N  T  T  T  D  N  N  C  H  *  T  N  R  K  *  E  S  H  T  W  T  S  S  N  S  Y  N  I  T  T  L  H  T  R  M  K  F  N  E  V  F  F  I  Q  H  R  I  S  A  N  I  *  G  H  N  N  S  Q  *  K  E  N  S  I  S  H  K  Q  Q  N  D  K  S  N  R  T  T  L  H  L  S  *  L  E  L  W  H  L  H  H  V  N  H  R  K  A  A  L  Q  K  R  H  V  C  S  L  S  F  L  S  K  K  T  I  I  D  A  N  L  F  F  L  T  K  N </first_frame>
            <second_frame>  Y  T  N  P  I  K  Y  I  N  I  V  F  S  V  P  F  P  C  I  N  *  W  C  S  S  T  *  W  S  E  T  K  S  N  I  S  L  L  I  E  L  I  C  T  P  P  R  P  T  L  P  Q  I  T  T  V  T  K  L  T  G  N  K  N  P  T  P  G  H  P  V  I  P  T  I  S  P  R  F  T  P  E  *  N  L  M  K  S  S  S  F  N  T  E  S  L  Q  I  Y  K  D  I  I  I  L  N  E  K  K  I  L  F  L  T  N  N  K  M  I  R  V  I  E  P  P  C  T  C  H  D  L  N  F  G  T  F  T  M  *  I  I  E  K  Q  L  C  R  R  G  T  F  V  H  Y  P  S  Y  R  K  K  Q  S  L  M  Q  I  Y  F  F  *  Q  K   </second_frame>
            <third_frame>   T  P  I  Q  *  N  T  *  T  L  C  F  Q  F  L  S  P  A  L  I  N  G  V  Q  V  R  D  G  V  R  L  R  V  T  F  L  F  *  *  N  L  F  V  H  R  Q  D  Q  H  Y  H  R  *  Q  L  S  L  N  *  Q  E  I  R  I  P  H  L  D  I  Q  *  F  L  Q  Y  H  H  A  S  H  Q  N  E  I  *  *  S  L  L  H  S  T  Q  N  L  C  K  Y  I  R  T  *  *  F  S  M  K  R  K  F  Y  F  S  Q  T  T  K  *  *  E  *  *  N  H  L  A  L  V  M  T  *  T  L  A  P  S  P  C  K  S  *  K  S  S  F  A  E  E  A  R  L  F  I  I  L  P  I  E  K  N  N  H  *  C  K  F  I  F  F  N  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0059D21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 25 chains have been computed
$ 
$ memory statistics:
$ 16760 bytes spliced alignments in total
$ 7 spliced alignments have been stored
$ 2394 bytes was the average size of a spliced alignment
$ 9024 bytes predicted gene locations in total
$ 3 predicted gene locations have been stored
$ 3008 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 25 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 05:45:04
-->
