<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 05:48:29"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06HBa0086B01-9MyZf/GenomeThreader_SGN_markers/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06HBa0086B01-9MyZf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0086B01-9MyZf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M9153-2" ref_strand="+" ref_description="SGN-M9153-2 C2_At5g61910-2 [cosii_markers]">
      <seq>caatggccaatgttggcccactaaatactaatcttgcttttgctaaggaacatcaggtcaagtatatgtcattacccatctatttccaggatccatatattaccagaatgccacactttcatgctccacccattatggagcctcattcactggtctctcaagtgcaggatgaacccaagcaccagcctcgtttgtcaactgcttttgtcgatgagcaaaatgctgtagaaattgattcatctgaggacacccaagatgatatttctggctttatattcatgtgtggtagaaatacaaaacatgattgttatagattccgtgtttttgggcttccttcgaacaaacaagaaaggataaaaaagatcaagccaggagcaaagcttttcctgtttgatttcgaagcaaagcttctgtatggtgtatatgaggcaacatccactggaataataaacttggaatcacttgcttttggaggcaaatttccagcacaggtgaaatttcgaatttttaaggaatgtcttcccctgccagaagcctctttcagacacgctataaagggcaattatcgtgacagaaagtttgaacccgaattaaatgatcatcaagtgaggaatttattatctttatttcatcccctacctgtgttagtaacagcaacagcggtgccccatccactggaaaaagtgggccagtcttttgctaatgttgacatgccaaagattacacccgcttgggctatggaagaccaggttaagttgctgtcctgtacccaggcaaaagtgggttcagcattggccaatgttccaccaccaaatacaattcctgcattgtatatggaacatcatgctaagtattcctcgatgcccacttctgtggagaatccatatatgaccagaatgcagcacgttcatcctccacccattgtggaatctcaacgagtctatgaactccatagtgctcagcatggatggcctagaaccacgagcttcatggagagtgctcttacagttgcagaacctaaacagttgactgctcccagtcatgcatattctcatcaaccatatgtcactcaaggcattttcactgatatacggaatccatatcacaggtatgggatcatgcaaagtgggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0086B01-9MyZf/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C06HBa0086B01.1" temp_strand="-" temp_description="C06HBa0086B01.1  AC209509.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0086B01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="14606" stop="11165"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14306" g_stop="14044" g_length="263"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="254" r_length="254" r_score="0.924"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14043" i_stop="13868" i_length="176">
            <donor d_prob="1.000" d_score="0.78"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13867" g_stop="13631" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="491" r_length="237" r_score="0.945"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13630" i_stop="12203" i_length="1428">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.958" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12202" g_stop="12089" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="605" r_length="114" r_score="0.982"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12088" i_stop="11980" i_length="109">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.980" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11979" g_stop="11477" g_length="503"/>
          <reference_exon_boundary r_type="cDNA" r_start="606" r_stop="1108" r_length="503" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0086B01.1" gen_strand="-" ref_id="SGN-M9153-2" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>1117</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0086B01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-M9153-2" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14306" e_stop="14044"/>
          <exon e_start="13867" e_stop="13631"/>
          <exon e_start="12202" e_stop="12089"/>
          <exon e_start="11979" e_stop="11477"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATGGCCAATGTTTGCCCACTAAATACTAATCCTGCTTTTGCTAAGGAACATCAGGTCAAGTACATGTCATTACCCATCTATTTTCAGGATCCATATATTACCAGAATGCCACACTTTCATGCTCCACCAATTATGGAGCCTCATATACTGGTCTCTCAAGTGCAGGATGAACCCAAGCACCAGCCTCGTTTGTCTACTGCTTTTGTCAATGAGCAAAATACTGGTGAAGCTGTAGACATTGATCCATCTGAGGACACCCAAGTACTTTTTTTTTCCTTCTATCATTATTTAAATCATTACTCTTCTGTAACAATAAAAGCATGTTATATTTTTATCGGCATCATTTTGGCATAAAAAATATACTTGGTTAGCCTGTTGTATTTCTTAGTTTCTGAAATGTGTTCTTTTTGGTCCTGCAGGATGAATCTGACCGACAGGATGATATTTCTGGTTTTATATTCATGTGTGGTAGAAATACAAAACATGATTGTTACAGATTCCGTGTGTTTGGGCTTCCTTTGAACAAACAAGAAATAATAAAAAATATTAAGCCAGGGGCAAAGCTTTTCCTGTTTGATTTCGAAGCAAAACTTCTGTATGGTGTATATGAGGCAACATCCACTGGAATAATGAACTTGGAGCCACTTGCTTTTGGAGGCAAATTTCCAGCACAGGTAAACCAGTTTGCAGTCAGTTATTTAAAATTCTGTTTACTTCTTGATTTTTCAATGTATGATGATAGTAAGAAAATGGGTGTGGGGCTCAATGTGATTTAATTTCATCCTGCTTGTATTTATGATTTGCTTGGCTCTTAAGCCCTCAAGCTGAAGAATTTCCGTTCTCCAATCTTTCCATTTCATTGTGCAAGTTCTTAGGCTTTTATGTGCATAATACCAAAGATATAGAAGCTTTGAGCCACGTGATGCTTTTATTTCTATGATGTTGTCACTATCAGTAGAAAGTCATTGCTAGTTTGTTCCACATCCTTCTGTCTACTCTTATGTGTCTTCAGTGTAAGTTTGTAGCTTGTTATTGTTAGTCACAGGGATATTACTAAGATACTTTCTAAATTGTTACATCCCAAATCTCTTTCCTTTTGCTCAACTTATACATGATTATGCATTTCTAATTCTAGTTTGTTTCTGAATGTTACTCTGTAGATAATTTAATGTCTTAGACCAAACATCAATGTTGTAATTGATCATTGAACTTAGAGGTATTTGATTTGGACACTAGTTATATGTGTATTATAAAAATTGCAGATATTGTTTATGTAATGAAAAATATATATTTTTTGAATCATACAGTGATTAATATTGAAGGAATTGTAAGCAGTAAGTATAATGAAGGGATTGTTATACAAGGATTACTTACTTAAGGGACATTTTTGTATTTGGATAATATCCTTTGTACTGTTACTATCATATTCTTGTTCCATATTTTATCCTGCATAAATTAATGCGTAAATTCTTGTGTAACTTAATGCAGATATTATTTATTACCACCAACAAAACACTGCATTACTAATGCAGAGATTTTTTTATGTGGCCAACCAAATCCTCATTAGTCACACTGGGTTTTATGTTGAGATAAATTATACTGATACGATCAACCAAACAACCTCTTAGAGTCTTGGACCAATAAACACCTGACATTGTTGTCGATGTGTGATTCTTTCGTATTGTTTTAGTAAGAGACATATCATAGCTTCCCTTTTTTCTTTTGAACAGCATATCATGACTTCTTTATTTGTCACATTATTATTATGATTATTTTATATGTGGTCACTCTACACCACAACTGCCCCCTCAGGAGCCAAATGTTGTCCTTCCTCACTTTGTTCCCTTGTTTACTCAAACAACTAATCTTGTACATGGAGGTAGAGGGTCTTTACCACTTGGTTATCCATCCCCTGTTAGGGTTCTTTTGTTGCTGCAGTAGGTCATGGACTGTTAAGGTATTAATTTAGCTATTAGGTTTTTATCTGGTATTATTAACATGCTTGATGTCTAGGTTATTTGGATTCACAATTATCACTTCATCCACATAATTGGCTTTTGCAATTATTTACGATGATTCATGATACTATTGCTCTTATTCAGGTGAAATTTCGAATTTTTAAGGAATGTCTTCCCCTGCCAGAACCCTCTTTCAGACACGCTATAAAGGACAATTATCGTGACAGAAAGTTTGAACCCGAATTAAATGATCATCAAGTAAGTGATTTCTTTCTTAGATATGGAGTGCTGATATATTTAGCATTAGTTGGTGTCTTGCAAATACTTTAAAGCTTGCTGTTCATTAAGGGCCTTCAAAAATATGCAGGTGAGGAGTTTATTGTCTATATTTCGTCCCCTACCTGCGTCAGTAACAGCAACAGTGGTGGCCCATCCACTGGAAAAAGTGGGCCAGTCTTTTGCTAATGTTGACATGCCAAAGATTACACCCGCTTGGGCTATGGAAGATCGGGTTAAGTTGCTGTCCTGTCCCCAGGCAAAAGTGGGTTCATCATTGGCCAATCTTCCACCACCAAACACAATTCCTGCTTTGTATATGGAACATCATTCTAAGTATTCCTCGATGCCCACTTCTGTGGAGAATCCATATATGACCAGAATGCAGCACGTTCATCCTCCACCAATTGTGGAATCTCAACGAGTCTATGAACTTCAAAGTGCTCAGCGTGGATGGCCTAGAACCACGAGCTTCATGGAGAGTGCTCTTACAGTTGGAGAACCTAAACAGTTGACTGCTCCCAGTAATGCATATTCTCATCAATCATATGTCACTCAAGGCATTTCAACTGATATATGGAATCCATATCACAG</genome_strand>
        <mrna_strand>CAATGGCCAATGTTGGCCCACTAAATACTAATCTTGCTTTTGCTAAGGAACATCAGGTCAAGTATATGTCATTACCCATCTATTTCCAGGATCCATATATTACCAGAATGCCACACTTTCATGCTCCACCCATTATGGAGCCTCATTCACTGGTCTCTCAAGTGCAGGATGAACCCAAGCACCAGCCTCGTTTGTCAACTGCTTTTGTCGATGAGC-AAA-A----T---GCTGTAGAAATTGATTCATCTGAGGACACCCAA................................................................................................................................................................................GATGATATTTCTGGCTTTATATTCATGTGTGGTAGAAATACAAAACATGATTGTTATAGATTCCGTGTTTTTGGGCTTCCTTCGAACAAACAAGAAAGGATAAAAAAGATCAAGCCAGGAGCAAAGCTTTTCCTGTTTGATTTCGAAGCAAAGCTTCTGTATGGTGTATATGAGGCAACATCCACTGGAATAATAAACTTGGAATCACTTGCTTTTGGAGGCAAATTTCCAGCACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAATTTCGAATTTTTAAGGAATGTCTTCCCCTGCCAGAAGCCTCTTTCAGACACGCTATAAAGGGCAATTATCGTGACAGAAAGTTTGAACCCGAATTAAATGATCATCAA.............................................................................................................GTGAGGAATTTATTATCTTTATTTCATCCCCTACCTGTGTTAGTAACAGCAACAGCGGTGCCCCATCCACTGGAAAAAGTGGGCCAGTCTTTTGCTAATGTTGACATGCCAAAGATTACACCCGCTTGGGCTATGGAAGACCAGGTTAAGTTGCTGTCCTGTACCCAGGCAAAAGTGGGTTCAGCATTGGCCAATGTTCCACCACCAAATACAATTCCTGCATTGTATATGGAACATCATGCTAAGTATTCCTCGATGCCCACTTCTGTGGAGAATCCATATATGACCAGAATGCAGCACGTTCATCCTCCACCCATTGTGGAATCTCAACGAGTCTATGAACTCCATAGTGCTCAGCATGGATGGCCTAGAACCACGAGCTTCATGGAGAGTGCTCTTACAGTTGCAGAACCTAAACAGTTGACTGCTCCCAGTCATGCATATTCTCATCAACCATATGTCACTCAAGGCATTTTCACTGATATACGGAATCCATATCACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0086B01-9MyZf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M9153" ref_strand="+" ref_description="SGN-M9153 C2_At5g61910 [cosii_markers]">
      <seq>ttaagccaagtggtatgatagatcaagcttttctccctattattgactcagcgggagtctctgcttctgttgcttctacagatccttcatctaccgtttgtagagctgcctcacaagacaaagagaaagacgaggaagctttcatggacctttctggttatatatttttgtgcaatagagagacaaaacttgattgtttcagatttcgtgttttgggggttggttcaaataaaaagaaaatggtagaaaagattaaacctggaacaaagctgttcctctttgatattgagttgaggctcttgtatggggtgtatgaggcaacatcctctggaggaataaacttggaagcacatgcttttgggggcaaatttccagcacaggtgaaatttcaaatttttaaggagtgttttcccctgcaagaatcttctttcagtcacgccataaagtacaattatcgcagaaagtttgaacccgaattaaatgattatcaagtgaggagtctattatccttattttgtcccctgactgcatcagcaacagcagcagttgtgtcccatccattggcaccatgtttggctaatgttggcttgccaaagattacacccgcttgggctatggaagatcgggttaagttgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0086B01-9MyZf/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C06HBa0086B01.1" temp_strand="-" temp_description="C06HBa0086B01.1  AC209509.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0086B01 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="16134" stop="14032"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15834" g_stop="15455" g_length="380"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="380" r_length="380" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15454" i_stop="14690" i_length="765">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.581" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14689" g_stop="14579" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="491" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14578" i_stop="14479" i_length="100">
            <donor d_prob="0.621" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14478" g_stop="14332" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="638" r_length="147" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0086B01.1" gen_strand="-" ref_id="SGN-M9153" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0086B01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-M9153" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15834" e_stop="15455"/>
          <exon e_start="14689" e_stop="14579"/>
          <exon e_start="14478" e_stop="14332"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAGCCAAGTGGTATGATAGATCAAGCTTTTCTCCCTATTATTGACTCAGCGGGAGTCTCTGCTTCTGTTGCTTCTACAGATCCTTCATCTACCGTTTGTAGAGCTGCCTCACAAGACAAAGAGAAAGACGAGGAAGCTTTCATGGACCTTTCTGGTTATATATTTTTGTGCAATAGAGAGACAAAACTTGATTGTTTCAGATTTCGTGTTTTGGGGGTTGGTTCAAATAAAAAGAAAATGGTAGAAAAGATTAAACCTGGAACAAAGCTGTTCCTCTTTGATATTGAGTTGAGGCTCTTGTATGGGGTGTATGAGGCAACATCCTCTGGAGGAATAAACTTGGAAGCACATGCTTTTGGGGGCAAATTTCCAGCACAGGTAACTCATATTTATTGTCACTCATATTTATTGTCAGTTAAATAAAATACCCAATTGTTATTAGTCTTAGTTTAAAAGATTTATGATGTATTAGGTAATGAGATCAGGACCTTCTGGTTTAGTGTGATCTGAACTAATCCTGCTTGCATTTATGATTTGGTAGATTTTTTTACCCCGAAGCTTGCCATGTATGTGTATTATTCAAGAACTAATCCAATTGTTTTAGTTATTTTATCTAAGAAACTCTACCCATCTAGAATTTTCTTCACCAATCTTTCCAGGTCATTGGGGCAATTGCTTAGTCGGTCAATGTGGATATTATATTCTCCTGGTAGGCGGAAGTTCTGAGGGATAATATGTTCCTTTACTTCTCTAGAGCCCGTGTGATGCATTTATTTCTGTTTAGTTGTCACTGTCTCATACCCATTGTAGGAAGCCATTGCTAATTTATTGTACATGTCTGTATGCATTTTTGTGGTGTCAGAGTATTTGTTTCATATCATGGTTGTAGTCACAGGGATAATTAGTTATTTCAGATAGTTTCAGTCTTTAAAGTTTTTTACTGCTGTGTTATGCGGGGTAGCACAACTTCTTCTTCTTCCTTTTTGATATGGTAGGATCAACTGCTAACTCTCTTTCCTTTTGAGCTTAATCGCGACACATTTGTTGTGGTGTCCAAGTTTTGACGAAATTACTCTCTCCACCTAATTGGTTTGCGTAACTAGATACTAGCTTTATGTTTCTGTTGCTTGTCTATCCACTCAGGTGAAATTTCAAATTTTTAAGGAGTGTTTTCCCCTGCAAGAATCTTCTTTCAGTCACGCCATAAAGTACAATTATCGCAGAAAGTTTGAACCCGAATTAAATGATTATCAAGTAAGGGATTTCTTTCTTAGTATGAAGTATCAATGTATTTCACACACTTACCGATGCTTTACCACTTTATTTTCTTCGAAAACAATCTTGAAATATACAGGTGAGGAGTCTATTATCCTTATTTTGTCCCCTGACTGCATCAGCAACAGCAGCAGTTGTGTCCCATCCATTGGCACCATGTTTGGCTAATGTTGGCTTGCCAAAGATTATGCCTGCCTTGGCTGTGAAAGATCAGGTTAAGTCGCTG</genome_strand>
        <mrna_strand>TTAAGCCAAGTGGTATGATAGATCAAGCTTTTCTCCCTATTATTGACTCAGCGGGAGTCTCTGCTTCTGTTGCTTCTACAGATCCTTCATCTACCGTTTGTAGAGCTGCCTCACAAGACAAAGAGAAAGACGAGGAAGCTTTCATGGACCTTTCTGGTTATATATTTTTGTGCAATAGAGAGACAAAACTTGATTGTTTCAGATTTCGTGTTTTGGGGGTTGGTTCAAATAAAAAGAAAATGGTAGAAAAGATTAAACCTGGAACAAAGCTGTTCCTCTTTGATATTGAGTTGAGGCTCTTGTATGGGGTGTATGAGGCAACATCCTCTGGAGGAATAAACTTGGAAGCACATGCTTTTGGGGGCAAATTTCCAGCACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAATTTCAAATTTTTAAGGAGTGTTTTCCCCTGCAAGAATCTTCTTTCAGTCACGCCATAAAGTACAATTATCGCAGAAAGTTTGAACCCGAATTAAATGATTATCAA....................................................................................................GTGAGGAGTCTATTATCCTTATTTTGTCCCCTGACTGCATCAGCAACAGCAGCAGTTGTGTCCCATCCATTGGCACCATGTTTGGCTAATGTTGGCTTGCCAAAGATTACACCCGCTTGGGCTATGGAAGATCGGGTTAAGTTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>2</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="14306" PGL_stop="11477"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14306" e_stop="14044"/>
            <exon e_start="13867" e_stop="13631"/>
            <exon e_start="12202" e_stop="12089"/>
            <exon e_start="11979" e_stop="11477"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.000" e_score="0.924"/>
          <exon-intron don_prob="0.999" acc_prob="0.958" e_score="0.945"/>
          <exon-intron don_prob="0.996" acc_prob="0.980" e_score="0.982"/>
          <exon-only e_score="0.948"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.924">
            <gDNA_exon_boundary e_start="14306" e_stop="14044" e_length="263"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="14043" i_stop="13868" i_length="176"/>
          </intron>
          <exon e_serial="2" e_score="0.945">
            <gDNA_exon_boundary e_start="13867" e_stop="13631" e_length="237"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.958">
            <gDNA_intron_boundary i_start="13630" i_stop="12203" i_length="1428"/>
          </intron>
          <exon e_serial="3" e_score="0.982">
            <gDNA_exon_boundary e_start="12202" e_stop="12089" e_length="114"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.980">
            <gDNA_intron_boundary i_start="12088" i_stop="11980" i_length="109"/>
          </intron>
          <exon e_serial="4" e_score="0.948">
            <gDNA_exon_boundary e_start="11979" e_stop="11477" e_length="503"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14306" stop="14044"/>
              <exon start="13867" stop="13631"/>
              <exon start="12202" stop="12089"/>
              <exon start="11979" stop="11477"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M9153-2" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAATGGCCAATGTTTGCCCACTAAATACTAATCCTGCTTTTGCTAAGGAACATCAGGTCAAGTACATGTCATTACCCATCTATTTTCAGGATCCATATATTACCAGAATGCCACACTTTCATGCTCCACCAATTATGGAGCCTCATATACTGGTCTCTCAAGTGCAGGATGAACCCAAGCACCAGCCTCGTTTGTCTACTGCTTTTGTCAATGAGCAAAATACTGGTGAAGCTGTAGACATTGATCCATCTGAGGACACCCAA : GATGATATTTCTGGTTTTATATTCATGTGTGGTAGAAATACAAAACATGATTGTTACAGATTCCGTGTGTTTGGGCTTCCTTTGAACAAACAAGAAATAATAAAAAATATTAAGCCAGGGGCAAAGCTTTTCCTGTTTGATTTCGAAGCAAAACTTCTGTATGGTGTATATGAGGCAACATCCACTGGAATAATGAACTTGGAGCCACTTGCTTTTGGAGGCAAATTTCCAGCACAG : GTGAAATTTCGAATTTTTAAGGAATGTCTTCCCCTGCCAGAACCCTCTTTCAGACACGCTATAAAGGACAATTATCGTGACAGAAAGTTTGAACCCGAATTAAATGATCATCAA : GTGAGGAGTTTATTGTCTATATTTCGTCCCCTACCTGCGTCAGTAACAGCAACAGTGGTGGCCCATCCACTGGAAAAAGTGGGCCAGTCTTTTGCTAATGTTGACATGCCAAAGATTACACCCGCTTGGGCTATGGAAGATCGGGTTAAGTTGCTGTCCTGTCCCCAGGCAAAAGTGGGTTCATCATTGGCCAATCTTCCACCACCAAACACAATTCCTGCTTTGTATATGGAACATCATTCTAAGTATTCCTCGATGCCCACTTCTGTGGAGAATCCATATATGACCAGAATGCAGCACGTTCATCCTCCACCAATTGTGGAATCTCAACGAGTCTATGAACTTCAAAGTGCTCAGCGTGGATGGCCTAGAACCACGAGCTTCATGGAGAGTGCTCTTACAGTTGGAGAACCTAAACAGTTGACTGCTCCCAGTAATGCATATTCTCATCAATCATATGTCACTCAAGGCATTTCAACTGATATATGGAATCCATATCACAG</gDNA_template>
            <first_frame> Q  W  P  M  F  A  H  *  I  L  I  L  L  L  L  R  N  I  R  S  S  T  C  H  Y  P  S  I  F  R  I  H  I  L  P  E  C  H  T  F  M  L  H  Q  L  W  S  L  I  Y  W  S  L  K  C  R  M  N  P  S  T  S  L  V  C  L  L  L  L  S  M  S  K  I  L  V  K  L  *  T  L  I  H  L  R  T  P  K :   M  I  F  L  V  L  Y  S  C  V  V  E  I  Q  N  M  I  V  T  D  S  V  C  L  G  F  L  *  T  N  K  K  *  *  K  I  L  S  Q  G  Q  S  F  S  C  L  I  S  K  Q  N  F  C  M  V  Y  M  R  Q  H  P  L  E  *  *  T  W  S  H  L  L  L  E  A  N  F  Q  H  R :   *  N  F  E  F  L  R  N  V  F  P  C  Q  N  P  L  S  D  T  L  *  R  T  I  I  V  T  E  S  L  N  P  N  *  M  I  I  K :   *  G  V  Y  C  L  Y  F  V  P  Y  L  R  Q  *  Q  Q  Q  W  W  P  I  H  W  K  K  W  A  S  L  L  L  M  L  T  C  Q  R  L  H  P  L  G  L  W  K  I  G  L  S  C  C  P  V  P  R  Q  K  W  V  H  H  W  P  I  F  H  H  Q  T  Q  F  L  L  C  I  W  N  I  I  L  S  I  P  R  C  P  L  L  W  R  I  H  I  *  P  E  C  S  T  F  I  L  H  Q  L  W  N  L  N  E  S  M  N  F  K  V  L  S  V  D  G  L  E  P  R  A  S  W  R  V  L  L  Q  L  E  N  L  N  S  *  L  L  P  V  M  H  I  L  I  N  H  M  S  L  K  A  F  Q  L  I  Y  G  I  H  I  T  </first_frame>
            <second_frame>  N  G  Q  C  L  P  T  K  Y  *  S  C  F  C  *  G  T  S  G  Q  V  H  V  I  T  H  L  F  S  G  S  I  Y  Y  Q  N  A  T  L  S  C  S  T  N  Y  G  A  S  Y  T  G  L  S  S  A  G  *  T  Q  A  P  A  S  F  V  Y  C  F  C  Q  *  A  K  Y  W  *  S  C  R  H  *  S  I  *  G  H  P   : R  *  Y  F  W  F  Y  I  H  V  W  *  K  Y  K  T  *  L  L  Q  I  P  C  V  W  A  S  F  E  Q  T  R  N  N  K  K  Y  *  A  R  G  K  A  F  P  V  *  F  R  S  K  T  S  V  W  C  I  *  G  N  I  H  W  N  N  E  L  G  A  T  C  F  W  R  Q  I  S  S  T   : G  E  I  S  N  F  *  G  M  S  S  P  A  R  T  L  F  Q  T  R  Y  K  G  Q  L  S  *  Q  K  V  *  T  R  I  K  *  S  S   : S  E  E  F  I  V  Y  I  S  S  P  T  C  V  S  N  S  N  S  G  G  P  S  T  G  K  S  G  P  V  F  C  *  C  *  H  A  K  D  Y  T  R  L  G  Y  G  R  S  G  *  V  A  V  L  S  P  G  K  S  G  F  I  I  G  Q  S  S  T  T  K  H  N  S  C  F  V  Y  G  T  S  F  *  V  F  L  D  A  H  F  C  G  E  S  I  Y  D  Q  N  A  A  R  S  S  S  T  N  C  G  I  S  T  S  L  *  T  S  K  C  S  A  W  M  A  *  N  H  E  L  H  G  E  C  S  Y  S  W  R  T  *  T  V  D  C  S  Q  *  C  I  F  S  S  I  I  C  H  S  R  H  F  N  *  Y  M  E  S  I  S  Q </second_frame>
            <third_frame>   M  A  N  V  C  P  L  N  T  N  P  A  F  A  K  E  H  Q  V  K  Y  M  S  L  P  I  Y  F  Q  D  P  Y  I  T  R  M  P  H  F  H  A  P  P  I  M  E  P  H  I  L  V  S  Q  V  Q  D  E  P  K  H  Q  P  R  L  S  T  A  F  V  N  E  Q  N  T  G  E  A  V  D  I  D  P  S  E  D  T  Q  :  D  D  I  S  G  F  I  F  M  C  G  R  N  T  K  H  D  C  Y  R  F  R  V  F  G  L  P  L  N  K  Q  E  I  I  K  N  I  K  P  G  A  K  L  F  L  F  D  F  E  A  K  L  L  Y  G  V  Y  E  A  T  S  T  G  I  M  N  L  E  P  L  A  F  G  G  K  F  P  A  Q  :  V  K  F  R  I  F  K  E  C  L  P  L  P  E  P  S  F  R  H  A  I  K  D  N  Y  R  D  R  K  F  E  P  E  L  N  D  H  Q  :  V  R  S  L  L  S  I  F  R  P  L  P  A  S  V  T  A  T  V  V  A  H  P  L  E  K  V  G  Q  S  F  A  N  V  D  M  P  K  I  T  P  A  W  A  M  E  D  R  V  K  L  L  S  C  P  Q  A  K  V  G  S  S  L  A  N  L  P  P  P  N  T  I  P  A  L  Y  M  E  H  H  S  K  Y  S  S  M  P  T  S  V  E  N  P  Y  M  T  R  M  Q  H  V  H  P  P  P  I  V  E  S  Q  R  V  Y  E  L  Q  S  A  Q  R  G  W  P  R  T  T  S  F  M  E  S  A  L  T  V  G  E  P  K  Q  L  T  A  P  S  N  A  Y  S  H  Q  S  Y  V  T  Q  G  I  S  T  D  I  W  N  P  Y  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0086B01.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14304" stop="14044"/>
                    <exon start="13867" stop="13631"/>
                    <exon start="12202" stop="12089"/>
                    <exon start="11979" stop="11479"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1113</number_coding_nucleotides>
                  <number_encoded_amino_acids>371</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MANVCPLNTNPAFAKEHQVKYMSLPIYFQDPYITRMPHFHAPPIMEPHILVSQVQDEPKHQPRLSTAFVNEQNTGEAVDIDPSEDTQDDISGFIFMCGRNTKHDCYRFRVFGLPLNKQEIIKNIKPGAKLFLFDFEAKLLYGVYEATSTGIMNLEPLAFGGKFPAQVKFRIFKECLPLPEPSFRHAIKDNYRDRKFEPELNDHQVRSLLSIFRPLPASVTATVVAHPLEKVGQSFANVDMPKITPAWAMEDRVKLLSCPQAKVGSSLANLPPPNTIPALYMEHHSKYSSMPTSVENPYMTRMQHVHPPPIVESQRVYELQSAQRGWPRTTSFMESALTVGEPKQLTAPSNAYSHQSYVTQGISTDIWNPYH</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="15834" PGL_stop="14332"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15834" e_stop="15455"/>
            <exon e_start="14689" e_stop="14579"/>
            <exon e_start="14478" e_stop="14332"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.581" e_score="1.000"/>
          <exon-intron don_prob="0.621" acc_prob="0.972" e_score="1.000"/>
          <exon-only e_score="0.939"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="15834" e_stop="15455" e_length="380"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.581">
            <gDNA_intron_boundary i_start="15454" i_stop="14690" i_length="765"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="14689" e_stop="14579" e_length="111"/>
          </exon>
          <intron i_serial="2" don_prob="0.621" acc_prob="0.972">
            <gDNA_intron_boundary i_start="14578" i_stop="14479" i_length="100"/>
          </intron>
          <exon e_serial="3" e_score="0.939">
            <gDNA_exon_boundary e_start="14478" e_stop="14332" e_length="147"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15834" stop="15455"/>
              <exon start="14689" stop="14579"/>
              <exon start="14478" stop="14332"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M9153" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTAAGCCAAGTGGTATGATAGATCAAGCTTTTCTCCCTATTATTGACTCAGCGGGAGTCTCTGCTTCTGTTGCTTCTACAGATCCTTCATCTACCGTTTGTAGAGCTGCCTCACAAGACAAAGAGAAAGACGAGGAAGCTTTCATGGACCTTTCTGGTTATATATTTTTGTGCAATAGAGAGACAAAACTTGATTGTTTCAGATTTCGTGTTTTGGGGGTTGGTTCAAATAAAAAGAAAATGGTAGAAAAGATTAAACCTGGAACAAAGCTGTTCCTCTTTGATATTGAGTTGAGGCTCTTGTATGGGGTGTATGAGGCAACATCCTCTGGAGGAATAAACTTGGAAGCACATGCTTTTGGGGGCAAATTTCCAGCACAG : GTGAAATTTCAAATTTTTAAGGAGTGTTTTCCCCTGCAAGAATCTTCTTTCAGTCACGCCATAAAGTACAATTATCGCAGAAAGTTTGAACCCGAATTAAATGATTATCAA : GTGAGGAGTCTATTATCCTTATTTTGTCCCCTGACTGCATCAGCAACAGCAGCAGTTGTGTCCCATCCATTGGCACCATGTTTGGCTAATGTTGGCTTGCCAAAGATTATGCCTGCCTTGGCTGTGAAAGATCAGGTTAAGTCGCTG</gDNA_template>
            <first_frame> L  S  Q  V  V  *  *  I  K  L  F  S  L  L  L  T  Q  R  E  S  L  L  L  L  L  L  Q  I  L  H  L  P  F  V  E  L  P  H  K  T  K  R  K  T  R  K  L  S  W  T  F  L  V  I  Y  F  C  A  I  E  R  Q  N  L  I  V  S  D  F  V  F  W  G  L  V  Q  I  K  R  K  W  *  K  R  L  N  L  E  Q  S  C  S  S  L  I  L  S  *  G  S  C  M  G  C  M  R  Q  H  P  L  E  E  *  T  W  K  H  M  L  L  G  A  N  F  Q  H  R :   *  N  F  K  F  L  R  S  V  F  P  C  K  N  L  L  S  V  T  P  *  S  T  I  I  A  E  S  L  N  P  N  *  M  I  I  K :   *  G  V  Y  Y  P  Y  F  V  P  *  L  H  Q  Q  Q  Q  Q  L  C  P  I  H  W  H  H  V  W  L  M  L  A  C  Q  R  L  C  L  P  W  L  *  K  I  R  L  S  R   </first_frame>
            <second_frame>  *  A  K  W  Y  D  R  S  S  F  S  P  Y  Y  *  L  S  G  S  L  C  F  C  C  F  Y  R  S  F  I  Y  R  L  *  S  C  L  T  R  Q  R  E  R  R  G  S  F  H  G  P  F  W  L  Y  I  F  V  Q  *  R  D  K  T  *  L  F  Q  I  S  C  F  G  G  W  F  K  *  K  E  N  G  R  K  D  *  T  W  N  K  A  V  P  L  *  Y  *  V  E  A  L  V  W  G  V  *  G  N  I  L  W  R  N  K  L  G  S  T  C  F  W  G  Q  I  S  S  T   : G  E  I  S  N  F  *  G  V  F  S  P  A  R  I  F  F  Q  S  R  H  K  V  Q  L  S  Q  K  V  *  T  R  I  K  *  L  S   : S  E  E  S  I  I  L  I  L  S  P  D  C  I  S  N  S  S  S  C  V  P  S  I  G  T  M  F  G  *  C  W  L  A  K  D  Y  A  C  L  G  C  E  R  S  G  *  V  A  </second_frame>
            <third_frame>   K  P  S  G  M  I  D  Q  A  F  L  P  I  I  D  S  A  G  V  S  A  S  V  A  S  T  D  P  S  S  T  V  C  R  A  A  S  Q  D  K  E  K  D  E  E  A  F  M  D  L  S  G  Y  I  F  L  C  N  R  E  T  K  L  D  C  F  R  F  R  V  L  G  V  G  S  N  K  K  K  M  V  E  K  I  K  P  G  T  K  L  F  L  F  D  I  E  L  R  L  L  Y  G  V  Y  E  A  T  S  S  G  G  I  N  L  E  A  H  A  F  G  G  K  F  P  A  Q  :  V  K  F  Q  I  F  K  E  C  F  P  L  Q  E  S  S  F  S  H  A  I  K  Y  N  Y  R  R  K  F  E  P  E  L  N  D  Y  Q  :  V  R  S  L  L  S  L  F  C  P  L  T  A  S  A  T  A  A  V  V  S  H  P  L  A  P  C  L  A  N  V  G  L  P  K  I  M  P  A  L  A  V  K  D  Q  V  K  S  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0086B01.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15832" stop="15455"/>
                    <exon start="14689" stop="14579"/>
                    <exon start="14478" stop="14332"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>636</number_coding_nucleotides>
                  <number_encoded_amino_acids>212</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KPSGMIDQAFLPIIDSAGVSASVASTDPSSTVCRAASQDKEKDEEAFMDLSGYIFLCNRETKLDCFRFRVLGVGSNKKKMVEKIKPGTKLFLFDIELRLLYGVYEATSSGGINLEAHAFGGKFPAQVKFQIFKECFPLQESSFSHAIKYNYRRKFEPELNDYQVRSLLSLFCPLTASATAAVVSHPLAPCLANVGLPKIMPALAVKDQVKSL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 4 chains have been computed
$ 
$ memory statistics:
$ 4304 bytes spliced alignments in total
$ 2 spliced alignments have been stored
$ 2152 bytes was the average size of a spliced alignment
$ 6864 bytes predicted gene locations in total
$ 2 predicted gene locations have been stored
$ 3432 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 4 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 05:48:32
-->
