<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 05:52:59"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E545661" ref_strand="+" ref_description="SGN-E545661 [TUS-68-K1](-)">
      <seq>agtaagaagaagataatggtgcccaagctaatgcaagggcacatgaaagactttggggatgatagggagtctctaatagaagggatgtatagtcaattcccaagctcgtgctcttgaaaaaagtcgatgatggattgtcttgatgcgggggaaaagaaatttttatcgctagctaagatgatagaggttcaaccttatgcttcaaaatttggatacttactccccctatgaacataacaattgtttgcgcgtagttgatggaactttaataatcttattattttattggttggtttttaaaggtctgaatggaaatcattgggccctaaattcctcaaaaaggaaaataggggggttactttagatggctcaaaatttcgatacttgttcccccttacgagttatttatttgtttcccaattaattaatagttgttaaatataataatttttaagcccccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0250I21.2" temp_strand="-" temp_description="C06HBa0250I21.2  AC209512.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0250I21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="5636" stop="4575"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5336" g_stop="4876" g_length="461"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="461" r_length="461" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="462" polyA_stop="508"/>
      <MATCH_line gen_id="C06HBa0250I21.2" gen_strand="-" ref_id="SGN-E545661" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="0.907" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0250I21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E545661" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5336" e_stop="4876"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTAAGAAGAAGATAATGGTGCCCAAGCTAATGCAATGGCACATGAAAGACTTTGCGGATGATATGGAGTCTCTAATAGAATGGATGTATAGTCAATTACCAAGCTCGTGCTCTTTGAAAAAGTCGATGATGGATTGTCTTGATGCGGGGGAAAAGAAATATTTATCGCTAGCTAAGATGATAGAGGTTCAACCTTATGCTTCAGAATTTCGATACTTACTCCCACTATGAACATAACAATTGTTTGCGCGTAGTTGATTGAACTTTAATAATCTTATTATTTTATTTGTTTGTTTTTAAAGGTCTGAATTGTAATCATTCGGACCTAAAATCCTCAAAAAGGAAAATAGAGGTGTTACTTTAGATGGCTCAAAATTTCGATACTTGTTCCCCCTTACGAGTTATTTATTTGTTTGCCAATTAATTAATAGTTGTTAAATATAATAATTATTAAGACCACA</genome_strand>
        <mrna_strand>AGTAAGAAGAAGATAATGGTGCCCAAGCTAATGCAAGGGCACATGAAAGACTTTGGGGATGATAGGGAGTCTCTAATAGAAGGGATGTATAGTCAATTCCCAAGCTCGTGCTCTTGAAAAAAGTCGATGATGGATTGTCTTGATGCGGGGGAAAAGAAATTTTTATCGCTAGCTAAGATGATAGAGGTTCAACCTTATGCTTCAAAATTTGGATACTTACTCCCCCTATGAACATAACAATTGTTTGCGCGTAGTTGATGGAACTTTAATAATCTTATTATTTTATTGGTTGGTTTTTAAAGGTCTGAATGGAAATCATTGGGCCCTAAATTCCTCAAAAAGGAAAATAGGGGGGTTACTTTAGATGGCTCAAAATTTCGATACTTGTTCCCCCTTACGAGTTATTTATTTGTTTCCCAATTAATTAATAGTTGTTAAATATAATAATTTTTAAGCCCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E310582" ref_strand="+" ref_description="SGN-E310582 [cLEZ-19-F18]">
      <seq>atgataacgaaagatttttgaggaatgcttatggtcttgaatatccagaacctaatgtcacattttcactatgtcgaggaagttggtcttcaccagcgctaaggatctatagaccagatgaagtcgcgaacgagcttgagagagcgaaaatggagtatttggaagcttcggtaggagtaacaagtaagaagaagataatggtgcccaagctaatgcaatggcacatgaaagactttgcggatgatatggagtctctaatagaatggatgtatagtcaattaccaagctcgtgctctttgaaaaagtcgatgatggattgtcttgatgcgggggaaaagaaatatttatcgctagctaagatgatagaggttcaaccttatgcttcagaatttcgatacttactcccactatgaacataacaattgtttgcgcgtagttgattgaactttaataatcttattattttatttgtttgtttttaaaggtctgaattgtaatcattcggacctaaaatcctcaaaaaggaaaatagaggtgttactttagatggctcaaaatttcgatacttgttcccccttacgagttatttatttgtttgccaattaattaatagttgttaaatataataattattaagac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0250I21.2" temp_strand="-" temp_description="C06HBa0250I21.2  AC209512.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0250I21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="6583" stop="4580"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6283" g_stop="6186" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="6185" i_stop="5421" i_length="765">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5420" g_stop="4880" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="639" r_length="541" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0250I21.2" gen_strand="-" ref_id="SGN-E310582" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0250I21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E310582" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6283" e_stop="6186"/>
          <exon e_start="5420" e_stop="4880"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGATAACGAAAGATTTTTGAGGAATGCTTATGGTCTTGAATATCCAGAACCTAATGTCACATTTTCACTATGTCGAGGAAGTTGGTCTTCACCAGCGGTAAGTTCGTTACAATTTACGTGACACATTTTTTTCAGTCGGTTCCAAAAAAAAAGATATATTGTTATGTATAGTAATAACTTGATTTTAAGTTTTTTATTTTATTTTTGACGAAATGATTTATAATTACGTAAATATTTTGAAAAAAATGACAAAATGGTCCTTTAAATTTGAGGATGGGTTCAAAATAATCCCTTTTAAGTATGTGAAGAACAATTTTGGTCCTTAAATTTGTCAAAAGCTATAGTCTTGGTCAACCAATTCACAATTTATGTTCGTTAGGTTTGACGAAAATAGTTGTGAAAAAATGAACCATAAACGTCTAAAAGTCTAACTAAATCCTAAAATATTTAATCCACAAAATTAAATAAGACACTAAATTTTTTTTATCAGAAATTACACCTTAAATAGTTAAATCAGACTTTAGAAATAATTTTAAAATAGCAAAATTACAAAAATTGTACCTTTAAATGCAAGTTCCTTCTAATGCTTCTTTTTTTCATAGTTTTTTTAAAAATTTAATCGACGGAGTTCGTTAAATATTTGACGTAGACTAAAGTGTTAATTCTTGACAAACTTCAAGGACTAAAATTGTTCAATGAAACACTGAAGTATCTATTTTGAACCAACCCTTATACTTAAGTGACCGTTTTGTCATTTTTCAAAATATCAACCGTCTATCATAGTAGACAACAAGTCAATCTTAAACATCGTGTCCAGTTAAATACATTCAATATGAATGGAAGTTTGTAATTGTCAATGCAGCTAAGGATCTATAGACCAGATGAAGTCGCGAACGAGCTTGAGAGAGCGAAAATGGAGTATTTGGAAGCTTCGGTAGGAGTAACAAGTAAGAAGAAGATAATGGTGCCCAAGCTAATGCAATGGCACATGAAAGACTTTGCGGATGATATGGAGTCTCTAATAGAATGGATGTATAGTCAATTACCAAGCTCGTGCTCTTTGAAAAAGTCGATGATGGATTGTCTTGATGCGGGGGAAAAGAAATATTTATCGCTAGCTAAGATGATAGAGGTTCAACCTTATGCTTCAGAATTTCGATACTTACTCCCACTATGAACATAACAATTGTTTGCGCGTAGTTGATTGAACTTTAATAATCTTATTATTTTATTTGTTTGTTTTTAAAGGTCTGAATTGTAATCATTCGGACCTAAAATCCTCAAAAAGGAAAATAGAGGTGTTACTTTAGATGGCTCAAAATTTCGATACTTGTTCCCCCTTACGAGTTATTTATTTGTTTGCCAATTAATTAATAGTTGTTAAATATAATAATTATTAAGAC</genome_strand>
        <mrna_strand>ATGATAACGAAAGATTTTTGAGGAATGCTTATGGTCTTGAATATCCAGAACCTAATGTCACATTTTCACTATGTCGAGGAAGTTGGTCTTCACCAGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAGGATCTATAGACCAGATGAAGTCGCGAACGAGCTTGAGAGAGCGAAAATGGAGTATTTGGAAGCTTCGGTAGGAGTAACAAGTAAGAAGAAGATAATGGTGCCCAAGCTAATGCAATGGCACATGAAAGACTTTGCGGATGATATGGAGTCTCTAATAGAATGGATGTATAGTCAATTACCAAGCTCGTGCTCTTTGAAAAAGTCGATGATGGATTGTCTTGATGCGGGGGAAAAGAAATATTTATCGCTAGCTAAGATGATAGAGGTTCAACCTTATGCTTCAGAATTTCGATACTTACTCCCACTATGAACATAACAATTGTTTGCGCGTAGTTGATTGAACTTTAATAATCTTATTATTTTATTTGTTTGTTTTTAAAGGTCTGAATTGTAATCATTCGGACCTAAAATCCTCAAAAAGGAAAATAGAGGTGTTACTTTAGATGGCTCAAAATTTCGATACTTGTTCCCCCTTACGAGTTATTTATTTGTTTGCCAATTAATTAATAGTTGTTAAATATAATAATTATTAAGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E545662" ref_strand="+" ref_description="SGN-E545662 [TUS-68-K1]">
      <seq>gatgataacgaaagatttttgaggaatgcttatggtcttgaatatccagaacctaatgtcacattttcactatgtcgaggaagttggtcttcaccagcgctaaggatctatagaccagatgaagtcgcgaacgagcttgagagagcgaaaatggagtatttggaagcttcggtaggagtaacaagtaagaagaagataatggtgcccaagctaatgcaatggcacatgaaagactttgcggatgatatggagtctctaatagaatggatgtatagtcaattaccaagctcgtgctctttgaaaaagtcgatgatggattgtcttgatgcgggggaaaagaaatatttatcgctagctaagatgatagaggttcaaccttatgcttcagaatttcgatacttactcccactatgaacataacaattgtttgcgcgtagttgattgaactttaataatcttattattttatttgtttgtttttaaaggtctgaattgtaatcattcggacctaaaatcctcaaaaaggaaaatagaggtgttactttagatggctcaaaatttcgatacttgttcccccttacgaagtatttatttgtttggcaattaattaatagttgttaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0250I21.2" temp_strand="-" temp_description="C06HBa0250I21.2  AC209512.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0250I21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="6584" stop="4598"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6284" g_stop="6186" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="6185" i_stop="5421" i_length="765">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5420" g_stop="4898" g_length="523"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="622" r_length="523" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0250I21.2" gen_strand="-" ref_id="SGN-E545662" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>622</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0250I21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E545662" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6284" e_stop="6186"/>
          <exon e_start="5420" e_stop="4898"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGATAACGAAAGATTTTTGAGGAATGCTTATGGTCTTGAATATCCAGAACCTAATGTCACATTTTCACTATGTCGAGGAAGTTGGTCTTCACCAGCGGTAAGTTCGTTACAATTTACGTGACACATTTTTTTCAGTCGGTTCCAAAAAAAAAGATATATTGTTATGTATAGTAATAACTTGATTTTAAGTTTTTTATTTTATTTTTGACGAAATGATTTATAATTACGTAAATATTTTGAAAAAAATGACAAAATGGTCCTTTAAATTTGAGGATGGGTTCAAAATAATCCCTTTTAAGTATGTGAAGAACAATTTTGGTCCTTAAATTTGTCAAAAGCTATAGTCTTGGTCAACCAATTCACAATTTATGTTCGTTAGGTTTGACGAAAATAGTTGTGAAAAAATGAACCATAAACGTCTAAAAGTCTAACTAAATCCTAAAATATTTAATCCACAAAATTAAATAAGACACTAAATTTTTTTTATCAGAAATTACACCTTAAATAGTTAAATCAGACTTTAGAAATAATTTTAAAATAGCAAAATTACAAAAATTGTACCTTTAAATGCAAGTTCCTTCTAATGCTTCTTTTTTTCATAGTTTTTTTAAAAATTTAATCGACGGAGTTCGTTAAATATTTGACGTAGACTAAAGTGTTAATTCTTGACAAACTTCAAGGACTAAAATTGTTCAATGAAACACTGAAGTATCTATTTTGAACCAACCCTTATACTTAAGTGACCGTTTTGTCATTTTTCAAAATATCAACCGTCTATCATAGTAGACAACAAGTCAATCTTAAACATCGTGTCCAGTTAAATACATTCAATATGAATGGAAGTTTGTAATTGTCAATGCAGCTAAGGATCTATAGACCAGATGAAGTCGCGAACGAGCTTGAGAGAGCGAAAATGGAGTATTTGGAAGCTTCGGTAGGAGTAACAAGTAAGAAGAAGATAATGGTGCCCAAGCTAATGCAATGGCACATGAAAGACTTTGCGGATGATATGGAGTCTCTAATAGAATGGATGTATAGTCAATTACCAAGCTCGTGCTCTTTGAAAAAGTCGATGATGGATTGTCTTGATGCGGGGGAAAAGAAATATTTATCGCTAGCTAAGATGATAGAGGTTCAACCTTATGCTTCAGAATTTCGATACTTACTCCCACTATGAACATAACAATTGTTTGCGCGTAGTTGATTGAACTTTAATAATCTTATTATTTTATTTGTTTGTTTTTAAAGGTCTGAATTGTAATCATTCGGACCTAAAATCCTCAAAAAGGAAAATAGAGGTGTTACTTTAGATGGCTCAAAATTTCGATACTTGTTCCCCCTTACGAGTTATTTATTTGTTTGCCAATTAATTAATAGTTGTTAAA</genome_strand>
        <mrna_strand>GATGATAACGAAAGATTTTTGAGGAATGCTTATGGTCTTGAATATCCAGAACCTAATGTCACATTTTCACTATGTCGAGGAAGTTGGTCTTCACCAGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAGGATCTATAGACCAGATGAAGTCGCGAACGAGCTTGAGAGAGCGAAAATGGAGTATTTGGAAGCTTCGGTAGGAGTAACAAGTAAGAAGAAGATAATGGTGCCCAAGCTAATGCAATGGCACATGAAAGACTTTGCGGATGATATGGAGTCTCTAATAGAATGGATGTATAGTCAATTACCAAGCTCGTGCTCTTTGAAAAAGTCGATGATGGATTGTCTTGATGCGGGGGAAAAGAAATATTTATCGCTAGCTAAGATGATAGAGGTTCAACCTTATGCTTCAGAATTTCGATACTTACTCCCACTATGAACATAACAATTGTTTGCGCGTAGTTGATTGAACTTTAATAATCTTATTATTTTATTTGTTTGTTTTTAAAGGTCTGAATTGTAATCATTCGGACCTAAAATCCTCAAAAAGGAAAATAGAGGTGTTACTTTAGATGGCTCAAAATTTCGATACTTGTTCCCCCTTACGAAGTATTTATTTGTTTGGCAATTAATTAATAGTTGTTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E311743" ref_strand="+" ref_description="SGN-E311743 [cLEZ-9-A2]">
      <seq>gtgccgaattcggcacgaggaagaagatcaagattttatgggaaaagataatctcttgttaccatctttgcaatggcgtcctgttcgttctcccaaatctaatcccggtaccaatgttcctacaaacatagcaagtcaggtttcagaaaggaactttgttggtcgtaaagaattaattgcacatcctccttcactttctaactcctttcagtaacgagtattcacgtcaaaaataaaaaatattaggtgatttatttttacacgtcaaaagtatttatagataattatttgatatgtattgctaatgagatatttgaacttacacaaatggttacggacatattattaagagaataaatatacataccaagactcttgatataacgttgtaatatttggacaatattatatgctntttatttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0250I21.2" temp_strand="-" temp_description="C06HBa0250I21.2  AC209512.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0250I21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="26243" stop="25225"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25948" g_stop="25542" g_length="407"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="407" r_length="407" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="423" polyA_stop="439"/>
      <MATCH_line gen_id="C06HBa0250I21.2" gen_strand="-" ref_id="SGN-E311743" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>407</cumulative_length_of_scored_exons>
        <coverage percentage="0.927" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0250I21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E311743" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25948" e_stop="25542"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAGAAATCTTCAACATAAAGAAGATCAAGATTTTATGGGAAAAGATAATCTCTTGTTACCATCTTTGCAATGGCGTCCTGTTCGTTCTCCCAAATCTAATCCCGGTACCAATGTTCCTACAAACATAGCAAGTCAGGTTTCAGAAAGGAACTTTGTTGGTCGTAAAGAATTAATTGCACATCCTCCTTCACTTTCTAACTCCTTTCAGTAACGAGTATTCACGTCAAAAATAAAAAATATTAGGTGATTTATTTTTACACGTCAAAAGTATTTATAGATAATTATTTGATATGTATTGCTAATGAGATATTTGAACTTACACAAATGGTTACGGACATATTATTAAGAGAATAAATATACATACCAAGACTCTTGATATAACGTTGTAATATTTGGACAATATT</genome_strand>
        <mrna_strand>GTGCCGAATTCGGCACGAGGAAGAAGATCAAGATTTTATGGGAAAAGATAATCTCTTGTTACCATCTTTGCAATGGCGTCCTGTTCGTTCTCCCAAATCTAATCCCGGTACCAATGTTCCTACAAACATAGCAAGTCAGGTTTCAGAAAGGAACTTTGTTGGTCGTAAAGAATTAATTGCACATCCTCCTTCACTTTCTAACTCCTTTCAGTAACGAGTATTCACGTCAAAAATAAAAAATATTAGGTGATTTATTTTTACACGTCAAAAGTATTTATAGATAATTATTTGATATGTATTGCTAATGAGATATTTGAACTTACACAAATGGTTACGGACATATTATTAAGAGAATAAATATACATACCAAGACTCTTGATATAACGTTGTAATATTTGGACAATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E212216" ref_strand="+" ref_description="SGN-E212216 [cLEC-75-O17]">
      <seq>aacgtgctgatgagatagaaaagaaacgtgctgactcgcaagaatcaagtgaagaaaagcacaagaagttggaagaaactgaaaaaaaagttcaacaatatcaggaatcaatgagcaggctcgaagaaaagctcaccaacatagagtcggaaaataaagtacttcgccagcaggctctgacaatggcacagaacaataaattgctgtcgggacggtcaagatcaagtattcagaggactgagagcagcacaaggaatagcgtagatctgcatagcacttcattttcaagggagagtgctgaggtggagggaagaccacagaaatcacttaatgataaacaacaggagtatcaggacttgatcatccggtgtattgcacagcaccttggcttctctaaaggccgacctgttgctgcctgcattatctacaagtgccttaggcagtggcgatcatttgaagtagagcgaaccagtatctttgacagggtaatacaaaccattggccaagctattgagactcacgacaacaatgatatgttagcctattggctatccaatgcatccactctattgctgctgctgcaacgtacattaaaagctggtggtgctgctgggatgaccccacagcacatgcgatcatcgtcagccactctatttgggagaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0250I21.2" temp_strand="+" temp_description="C06HBa0250I21.2  AC209512.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0250I21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="50208" stop="52723"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50508" g_stop="50625" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="118" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50626" i_stop="51622" i_length="997">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51623" g_stop="51737" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="233" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51738" i_stop="51812" i_length="75">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="51813" g_stop="51842" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="263" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51843" i_stop="51923" i_length="81">
            <donor d_prob="0.576" d_score="0.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51924" g_stop="52175" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="515" r_length="252" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="52176" i_stop="52273" i_length="98">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.824" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="52274" g_stop="52423" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="516" r_stop="665" r_length="150" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0250I21.2" gen_strand="+" ref_id="SGN-E212216" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>665</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0250I21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E212216" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50508" e_stop="50625"/>
          <exon e_start="51623" e_stop="51737"/>
          <exon e_start="51813" e_stop="51842"/>
          <exon e_start="51924" e_stop="52175"/>
          <exon e_start="52274" e_stop="52423"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACGTGCTGATGAGATAGAAAAGAAACGTGCTGACTCGCAAGAATCAAGTGAAGAAAAGCACAAGAAGTTGGAAGAAACTGAAAAAAAAGTTCAACAATATCAGGAATCAATGAGCAGGTAGCTACTCGAATAAATTGATACCTGTTTTACTCCTTATCTACTGTAAAAATTGAGATCACCAACCTTTTGTTCAAGAATTCAAAAGAAATAACTAAAGTACAGAATTGTCACAACCCAGCAAAGGGGCCATGACCGGCACTAACAAATGCTGGCTCATTCATGGCAAGTAACAAATTTCATTTTTCAAAATCTACTTGTGGAGGGGGAATATCCTTCTGTTTATTCTTCTAATTGATCTAAAGCTAAGATTCAAACTCGAGAGTAGTGTCCTGAATAAAATACCAAGTTGTTCTACCTCTTTCATGATAGGGAGGGTATGTTATCAGTCAAATTAGCTGGTATGATTCAGGATAAGTGACAGTCGTAGAGGCTTTACCAAGAAGTTTGACATACTATAATAGCTAACGATGCCTACTTAAGTATCCCCTCTATAATATCTTAAGTTAGAGCATTCATTTCATACAATATCACACGGTATCAATGCAGGCAGAGGACGTGGCTTCAAGCTCCATCACCATCCATCAACAAAATATTTCTACTTTCTTGAGAGCCCAAAACAAAAGGGGCTCACATGTGGGGGCAGTGCTTCAAACGATATGAATAAATAAATGTATATCCTCTCTCGGTTCAAGCCTTTAGATGAGATGTTCATACATTTAGTTTTTTTTTATATAGATGTCCACACACCAGTTTAATTTGTCCTATGACTTGAAGAAAAATTGCTGAAGCTGTGCTCAGGAGGATCCATAAGTTAATGGTCCTCTTTTAGTGACTAATGCTTGTCATAGTCACCTCTAACTAATGTAGATGAAAGGATAGCTCTGGATCTATACCTGGTTTGAATACTTGTTTGGAATATTGCAAATAAAATTAAAGAATAGACCAACTCTTGTCCTTCAGTTATATCTTTGTACTATATAAAATGGATATCTAGGAGTACCTTGGATTATTTCAGGATTTAGCTGATGAAAATATTTGTTCGTCTTACCAATAGGCTCGAAGAAAAGCTCACCAACATAGAGTCGGAAAATAAAGTACTTCGCCAGCAGGCTCTGACAATGGCACAGAACAATAAATTGCTGTCGGGACGGTCAAGATCAAGTATTCAGGTAATCCTGAAAACCTTTGCTCATATTGGATGTTAAATCTATGACTAATTTTTCCCTGTTCTTTGATATTGGCAGAGGACTGAGAGCAGCACAAGGAATAGCGTAGTAAGTCAAGGGCTTGCATATTAGTTGTCTAGTATATTTCTGACCTCTTTTGTTGGTTGACTAACAATTGTTTTTTTAAAGGATCTGCATAGCACTTCATTTTCAAGGGAGAGTGCTGAGGTGGAGGGAAGACCACAGAAATCACTTAATGATAAACAACAGGAGTATCAGGACTTGATCATCCGGTGTATTGCACAGCACCTTGGCTTCTCTAAAGGCCGACCTGTTGCTGCCTGCATTATCTACAAGTGCCTTAGGCAGTGGCGATCATTTGAAGTAGAGCGAACCAGTATCTTTGACAGGGTAATACAAACCATTGGCCAAGCTATTGAGGTCAGTATTAATATAGTTATACAATTTCACTGCGAATGATGCAGATCAATAAATAAATGCCTCTTTTTCACTTAAAAACTAGTTTTTCAACATTGTAGACTCAGGACAACAATGATATGTTAGCCTATTGGCTATCCAATGCATCCACTCTATTGCTGCTGCTGCAACGTACATTAAAAGCTGGTGGTGCTGCTGGGATGACCCCACAGCACAGGCGATCATCGTCAGCCACTCTATTTGGGAGAATG</genome_strand>
        <mrna_strand>AACGTGCTGATGAGATAGAAAAGAAACGTGCTGACTCGCAAGAATCAAGTGAAGAAAAGCACAAGAAGTTGGAAGAAACTGAAAAAAAAGTTCAACAATATCAGGAATCAATGAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCGAAGAAAAGCTCACCAACATAGAGTCGGAAAATAAAGTACTTCGCCAGCAGGCTCTGACAATGGCACAGAACAATAAATTGCTGTCGGGACGGTCAAGATCAAGTATTCAG...........................................................................AGGACTGAGAGCAGCACAAGGAATAGCGTA.................................................................................GATCTGCATAGCACTTCATTTTCAAGGGAGAGTGCTGAGGTGGAGGGAAGACCACAGAAATCACTTAATGATAAACAACAGGAGTATCAGGACTTGATCATCCGGTGTATTGCACAGCACCTTGGCTTCTCTAAAGGCCGACCTGTTGCTGCCTGCATTATCTACAAGTGCCTTAGGCAGTGGCGATCATTTGAAGTAGAGCGAACCAGTATCTTTGACAGGGTAATACAAACCATTGGCCAAGCTATTGAG..................................................................................................ACTCACGACAACAATGATATGTTAGCCTATTGGCTATCCAATGCATCCACTCTATTGCTGCTGCTGCAACGTACATTAAAAGCTGGTGGTGCTGCTGGGATGACCCCACAGCACATGCGATCATCGTCAGCCACTCTATTTGGGAGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E229053" ref_strand="+" ref_description="SGN-E229053 [cLEL-29-G8](-)">
      <seq>gcctcgtttgtggttctttttctggtggtggactatctcactagataatatgcaatggtcttatatttagttgttcaagactctccaaaaatgctaccacaaaccatgtcggatctgctaaaagtgcaccacttttgcaggattcgacatacatttttgaagagtccgagcaacataagttttatgtgcaaagttgctgagattctgatattggcattactatctcactgtaagaatgttcagacgtgtggatctgtgtcgagatgtttaaatacaatttgaagatgtggatctgtacaatgcaacttttgttacataaaaagtcagtggaaagattcaaaaagtgaaaagtttgaatcaccattttacctctcttccaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0250I21.2" temp_strand="-" temp_description="C06HBa0250I21.2  AC209512.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0250I21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="59118" stop="58134"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58818" g_stop="58416" g_length="403"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="403" r_length="403" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0250I21.2" gen_strand="-" ref_id="SGN-E229053" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>403</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0250I21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E229053" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58818" e_stop="58416"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTCGTTTGTGGTTCTTTTTCTGGTGGTGTACTATCTCACTAGATAATATGCAATGGTCTTATATTTAGTTGTTCAAGACTCTCCAAAAATGCTACCACAAACCATGTCGGATCTGCTAAAAGTGCACCACTTTTGCAGGATTCGACATACATTTTTGAAGAGTCCGAGCAACATAAGTTTTATGTGCAAAGTTGCTGAGATTCTGATATTGGCATTACTATCTCACTGTAAGAATGTTCAGACGTGTGTATCTGTGTCGAGATGTTTAAATACAATTTGAAGATGTGGATCTGTACAATGCAACTTTTGTTACATAAAAAGTCAGTGGAAAGATTCAAAAAGTGAAAAGTTTGAATCACCATTTTACCTCTCTTCAATTAAAATTTTATCAAATATAAATA</genome_strand>
        <mrna_strand>GCCTCGTTTGTGGTTCTTTTTCTGGTGGTGGACTATCTCACTAGATAATATGCAATGGTCTTATATTTAGTTGTTCAAGACTCTCCAAAAATGCTACCACAAACCATGTCGGATCTGCTAAAAGTGCACCACTTTTGCAGGATTCGACATACATTTTTGAAGAGTCCGAGCAACATAAGTTTTATGTGCAAAGTTGCTGAGATTCTGATATTGGCATTACTATCTCACTGTAAGAATGTTCAGACGTGTGGATCTGTGTCGAGATGTTTAAATACAATTTGAAGATGTGGATCTGTACAATGCAACTTTTGTTACATAAAAAGTCAGTGGAAAGATTCAAAAAGTGAAAAGTTTGAATCACCATTTTACCTCTCTTCCAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E337008" ref_strand="+" ref_description="SGN-E337008 [cTOE-20-J5]">
      <seq>tgagttgagttcccatttgattcaggttcttgtaggcagagctaactgtgaagacaccttttgctatgatgaatccacctaagagtgtcttctccctctttcaatcctcgaaaatggtccagggtgccataattcagctagtctatccacctccaatcatgagttttgacttcatttactagggaaattatgtcactctttgcaaccttattttctttttgatattttttccctgtttagatgaagtaggtgtagtgatcccctttaatttttactctctcagattattgtccgaccatattaaacttgctagtttatcgaggtggaaaagagtcttagaaggtgtcattaatataagaatgggttggtttagcttatatacttatgcttcttttggtgctaactatcatttgttcaacctcaatttccaaaatatctatgttctaaagcctcttaaatgtatgcacattttttcgttctctagtatcataagtgaattcatgtttgtgtgtctgcttgttgttcccttacgctttcctctttttaaatggtatgagacgtaaatataaagccttaagcttgatccaattttagtaccgtaccttgacattaccataaactagcccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0250I21.2" temp_strand="-" temp_description="C06HBa0250I21.2  AC209512.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0250I21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61093" stop="59866"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60793" g_stop="60166" g_length="628"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="628" r_length="628" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0250I21.2" gen_strand="-" ref_id="SGN-E337008" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0250I21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E337008" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60793" e_stop="60166"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGTTGAGTCCCCATTTGATTCAGGTTCTTGTAGGCAGAGCTAACTGTGAAGACACCTTTTGCTATGATGAATCCACCTAAGAGTGTCTTCTCCCTCTTTCAATCCTCGAAAATGGTCCAGGGTGCCATAATTCAGCTAGTCTATCCACCTCCAATCATGAGTTTTGACTTCATTTACTAGGGAAATTATGTCACTCTTTGCAACCTTATTTTCTTTTTGATATTTTTTCCCTGTTTAGATGAAGTAGGTGTAGTGATCCCCTTTAATTTTTACTCTCTCAGATTATTGTCCGACCATATTAAACTTGCTAGTTTATCGAGGTGGAAAAGAGTCTTAGAAGGTGTCATTAATATAAGAATGGGTTGGTTTAGCTTATATACTTATGCTTCTTTTGGTGCTAACTATCATTTGTTCAACCTCAATTTCCAAAATATCTATGTTCTAAAGCCTCTTAAATGTATGCACATTTTTTCGTTCTCTAGTATCATAAGTGAATTCATGTTTGTGTGTCTGCTTGTTGTTCCCTTACGCTTTCCTCTTTTTAAATGGTATGAGACGTAAATATAAAGCTTCAGGCTTGATCCAATTTTAGTACCGTACCTTGACATTACCATAAACTAGCCCCT</genome_strand>
        <mrna_strand>TGAGTTGAGTTCCCATTTGATTCAGGTTCTTGTAGGCAGAGCTAACTGTGAAGACACCTTTTGCTATGATGAATCCACCTAAGAGTGTCTTCTCCCTCTTTCAATCCTCGAAAATGGTCCAGGGTGCCATAATTCAGCTAGTCTATCCACCTCCAATCATGAGTTTTGACTTCATTTACTAGGGAAATTATGTCACTCTTTGCAACCTTATTTTCTTTTTGATATTTTTTCCCTGTTTAGATGAAGTAGGTGTAGTGATCCCCTTTAATTTTTACTCTCTCAGATTATTGTCCGACCATATTAAACTTGCTAGTTTATCGAGGTGGAAAAGAGTCTTAGAAGGTGTCATTAATATAAGAATGGGTTGGTTTAGCTTATATACTTATGCTTCTTTTGGTGCTAACTATCATTTGTTCAACCTCAATTTCCAAAATATCTATGTTCTAAAGCCTCTTAAATGTATGCACATTTTTTCGTTCTCTAGTATCATAAGTGAATTCATGTTTGTGTGTCTGCTTGTTGTTCCCTTACGCTTTCCTCTTTTTAAATGGTATGAGACGTAAATATAAAGCCTTAAGCTTGATCCAATTTTAGTACCGTACCTTGACATTACCATAAACTAGCCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E704343" ref_strand="+" ref_description="SGN-E704343 [FA24AB05]">
      <seq>ccaagagatgctatatgactccagatggcgagtcaactgaatcaccaagaaagctagtgaggcgcccccctcctagtaggtcattgacctttagtactcctgtaaagagttcaaaagtcacagaagaaaccagccggagcagagaattatcaacagatgatgaaatctttgacattcttccagagaatcttctgcagtcgataagaacaaaagagcaggaggcactagaggagctagatccagccatatcccaagcaaaatggcgcaagaaaatgatttcaatcttgcctaagttttttgacatgatttacttcttatttcactcaattaaccgatctgtgatcactaaagaagagcttacacacaaagtgatttcaagccatctagctattgctgataaaagagaatttgaagagctactacggttattgcaagaaatagctcctgaatggatccatgaaaagctgtcatctagtggggatcttctcttgtgtgttagcaaggtatcaaatgctgattcaatacgcacaaggattgccgaagcaaagtgagaaagcaatggcaaggggatttgagttccaagtggagttgtaaatgatagtttcgctaacttaattatttcgatatattgacccactctgcagcatgtgactgcaatattttgctatttagtacagtttaatgtcattttaactggtttagctagcaattagagctanaataagcttgttagcgaagactgtctcaatatcttaccatgtattggagaacactttgcttgtatataggctatagccatgatgcttctcttggaatgaaaattgggtatactgaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0250I21.2" temp_strand="-" temp_description="C06HBa0250I21.2  AC209512.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0250I21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="64495" stop="62735"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64195" g_stop="63996" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="200" r_length="200" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63995" i_stop="63852" i_length="144">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63851" g_stop="63650" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="402" r_length="202" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63649" i_stop="63558" i_length="92">
            <donor d_prob="0.739" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63557" g_stop="63467" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="493" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="63466" i_stop="63378" i_length="89">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="63377" g_stop="63036" g_length="342"/>
          <reference_exon_boundary r_type="cDNA" r_start="494" r_stop="834" r_length="341" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="835" polyA_stop="845"/>
      <MATCH_line gen_id="C06HBa0250I21.2" gen_strand="-" ref_id="SGN-E704343" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>835</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0250I21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E704343" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64195" e_stop="63996"/>
          <exon e_start="63851" e_stop="63650"/>
          <exon e_start="63557" e_stop="63467"/>
          <exon e_start="63377" e_stop="63036"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAGAGATGCTATATGACTCCAGATGGCGAGTCAACTGAATCACCAAGAAAGCTAGTGAGGCGCCCCCCTCCTAGTAGGTCATTGACCTTTAGTACTCCTGTAAAGAGTTCAAAAGTCACAGAAGAAACCAGCCGGAGCAGAGAATTATCAACAGATGATGAAATCTTTGACATTCTTCCAGAGAATCTTCTGCAGTCGGTAAGATGCAACAAACTTTCTTCCATGACAACATTTCCTTGTTGACAACATAAAAGTTGATCCTTTAGGCTGAGAGGAATTAGGATATCTATATTTCTTAGTCTAGTATTTGAAGTTGGTGGCTAATTTTTCTTGGATCTGCAGATAAGAACAAAAGAGCAGGAGGCACTAGAGGAGCTAGATCCAGCCATATCCCAAGCAAAATGGCGCAAGAAAATGATTTCAATCTTGCCTAAGTTTTTTGACATGATTTACTTCTTATTTCACTCAATTAACCGATCTGTGATCACTAAAGAAGAGCTTACACACAAAGTGATTTCAAGCCATCTAGCTATTGCTGATAAAAGTAAGCCTGGTTGATAATTATTTGAATACTTTGAGTGCTTTGACAAACTGAAACTGATTCTGACTTGAAACATTTTTCTTCTTTCTTTGCAGGAGAATTTGAAGAGCTACTACGGTTATTGCAAGAAATAGCTCCTGAATGGATCCATGAAAAGCTGTCATCTAGTGGGGATCTTCTCTTGTGGTAAGCTTAGATAAGTTCAAATCTTGAATCTACCTCTGCGTTGCTGTCTTCTTAGGAGCTTGACGTGATAATTTGTGTTTTCATTGCAGTGTTAGCAAGGTATCAAATGCTGATTCAATACGCACAAGGATTGCCGAAGCAAAGTGAGAAAGCAATGGCAAGGGGATTTGAGTTCCAAGTGGAGTTGTAAATGATAGTTTCGCTAACTTAATTATTTCGATATATTGACCCACTCTGCAGCATGTGACTGCAATATTTTGCTATTTAGTACAGTTTAATGTCATTTTAACTGGTTTAGCTAGCAATTAGAGCTAAAATAAGCTTGTTAGCGAAGACTGTCTCAATATCTTACCATGTATTGGAGAACACTTTGCTTGTATATAGGCTATAGCCATGATGCTTCTCTTGGAATGAAAATTTGGTAATACTGA</genome_strand>
        <mrna_strand>CCAAGAGATGCTATATGACTCCAGATGGCGAGTCAACTGAATCACCAAGAAAGCTAGTGAGGCGCCCCCCTCCTAGTAGGTCATTGACCTTTAGTACTCCTGTAAAGAGTTCAAAAGTCACAGAAGAAACCAGCCGGAGCAGAGAATTATCAACAGATGATGAAATCTTTGACATTCTTCCAGAGAATCTTCTGCAGTCG................................................................................................................................................ATAAGAACAAAAGAGCAGGAGGCACTAGAGGAGCTAGATCCAGCCATATCCCAAGCAAAATGGCGCAAGAAAATGATTTCAATCTTGCCTAAGTTTTTTGACATGATTTACTTCTTATTTCACTCAATTAACCGATCTGTGATCACTAAAGAAGAGCTTACACACAAAGTGATTTCAAGCCATCTAGCTATTGCTGATAAAA............................................................................................GAGAATTTGAAGAGCTACTACGGTTATTGCAAGAAATAGCTCCTGAATGGATCCATGAAAAGCTGTCATCTAGTGGGGATCTTCTCTTGTG.........................................................................................TGTTAGCAAGGTATCAAATGCTGATTCAATACGCACAAGGATTGCCGAAGCAAAGTGAGAAAGCAATGGCAAGGGGATTTGAGTTCCAAGTGGAGTTGTAAATGATAGTTTCGCTAACTTAATTATTTCGATATATTGACCCACTCTGCAGCATGTGACTGCAATATTTTGCTATTTAGTACAGTTTAATGTCATTTTAACTGGTTTAGCTAGCAATTAGAGCTANAATAAGCTTGTTAGCGAAGACTGTCTCAATATCTTACCATGTATTGGAGAACACTTTGCTTGTATATAGGCTATAGCCATGATGCTTCTCTTGGAATGAAAATTGGGT-ATACTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E605448" ref_strand="+" ref_description="SGN-E605448 [21369]">
      <seq>attgtccaccaaacacctctaaattgctttgacacaaactaagaccacaagattctcaacacaaggggttcattctactactttaccaccatctcctctaccagcaactccattaaaaaacacgaaaagtgaagatggttcgtgtttgttaagtgctgaaagtactccagcaaaacttgcatctactccagcaaaattgatgagttctacacctttgctccaaccttccaagagatgctatatgactccagatggcgagtcaactgaatcaccaagaaagctagtgaggcgcccccctcctagtaggtcattgacctttaatactcctgtaaagagttcaaaagttgcagaagaaaccagccggaacagagaatcatcaacagatgatgaaatcttcgacattcttccagagaatcttctgcagtcgataagagcaaaagagcaggaggcactagaggagctagatccagccatatcccaagcaaaatggcgcaagaaaatgatttcggtcttgcctaagtttttcgatatgatttacttcctatttcactcaattaaccgatatgtgattactaaagaagagcttacacacaaagtgatttcgagccatctagcctattgctgataaaagagaatttgaagagctactccggttattgcaagaaatagctcctgaatggatccatgaaaaagctgtcatctagtggggatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0250I21.2" temp_strand="-" temp_description="C06HBa0250I21.2  AC209512.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0250I21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="64723" stop="63176"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64423" g_stop="63996" g_length="428"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="427" r_length="427" r_score="0.951"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63995" i_stop="63852" i_length="144">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63851" g_stop="63650" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="428" r_stop="630" r_length="203" r_score="0.946"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63649" i_stop="63558" i_length="92">
            <donor d_prob="0.739" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63557" g_stop="63476" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="631" r_stop="713" r_length="83" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0250I21.2" gen_strand="-" ref_id="SGN-E605448" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>712</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0250I21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E605448" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64423" e_stop="63996"/>
          <exon e_start="63851" e_stop="63650"/>
          <exon e_start="63557" e_stop="63476"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGTCCCACCAACACCTCTGAATTGCTTTTGACACAAACTAGGACCACAAGATTCTCAACTCAAGGGGTTCATTCTGCTACTTTACAACCATCTCCTCTACCAGCAACTCCAGTAAAAAACACGACAAATGAAGATGGTTCATGTTTGTTAAGTGCTGAGAGTACTCCAGCAAAACTTGCATCTACTCCAGCAAAATTGATGAGTACTACACCTTTGCTCCAACCTTCCAAGAGATGCTATATGACTCCAGATGGCGAGTCAACTGAATCACCAAGAAAGCTAGTGAGGCGCCCCCCTCCTAGTAGGTCATTGACCTTTAGTACTCCTGTAAAGAGTTCAAAAGTCACAGAAGAAACCAGCCGGAGCAGAGAATTATCAACAGATGATGAAATCTTTGACATTCTTCCAGAGAATCTTCTGCAGTCGGTAAGATGCAACAAACTTTCTTCCATGACAACATTTCCTTGTTGACAACATAAAAGTTGATCCTTTAGGCTGAGAGGAATTAGGATATCTATATTTCTTAGTCTAGTATTTGAAGTTGGTGGCTAATTTTTCTTGGATCTGCAGATAAGAACAAAAGAGCAGGAGGCACTAGAGGAGCTAGATCCAGCCATATCCCAAGCAAAATGGCGCAAGAAAATGATTTCAATCTTGCCTAAGTTTTTTGACATGATTTACTTCTTATTTCACTCAATTAACCGATCTGTGATCACTAAAGAAGAGCTTACACACAAAGTGATTTCAAGCCATCTAG-CTATTGCTGATAAAAGTAAGCCTGGTTGATAATTATTTGAATACTTTGAGTGCTTTGACAAACTGAAACTGATTCTGACTTGAAACATTTTTCTTCTTTCTTTGCAGGAGAATTTGAAGAGCTACTACGGTTATTGCAAGAAATAGCTCCTGAATGGATCCATG-AAAAGCTGTCATCTAGTGGGGATCT</genome_strand>
        <mrna_strand>ATTGTCCACCAAACACCTCTAAATTGCTT-TGACACAAACTAAGACCACAAGATTCTCAACACAAGGGGTTCATTCTACTACTTTACCACCATCTCCTCTACCAGCAACTCCATTAAAAAACACGAAAAGTGAAGATGGTTCGTGTTTGTTAAGTGCTGAAAGTACTCCAGCAAAACTTGCATCTACTCCAGCAAAATTGATGAGTTCTACACCTTTGCTCCAACCTTCCAAGAGATGCTATATGACTCCAGATGGCGAGTCAACTGAATCACCAAGAAAGCTAGTGAGGCGCCCCCCTCCTAGTAGGTCATTGACCTTTAATACTCCTGTAAAGAGTTCAAAAGTTGCAGAAGAAACCAGCCGGAACAGAGAATCATCAACAGATGATGAAATCTTCGACATTCTTCCAGAGAATCTTCTGCAGTCG................................................................................................................................................ATAAGAGCAAAAGAGCAGGAGGCACTAGAGGAGCTAGATCCAGCCATATCCCAAGCAAAATGGCGCAAGAAAATGATTTCGGTCTTGCCTAAGTTTTTCGATATGATTTACTTCCTATTTCACTCAATTAACCGATATGTGATTACTAAAGAAGAGCTTACACACAAAGTGATTTCGAGCCATCTAGCCTATTGCTGATAAAA............................................................................................GAGAATTTGAAGAGCTACTCCGGTTATTGCAAGAAATAGCTCCTGAATGGATCCATGAAAAAGCTGTCATCTAGTGGGGATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E553854" ref_strand="+" ref_description="SGN-E553854 [cTSC-2-H10]">
      <seq>gagaggtatttgcttatacggtatgaaatagatgagttgaacatcatggttgaagatttggatcgaaaagtaagtgcagttcataacagggcaaaagaaaaacttggattgcctgtatccgatgtttctaaagatgctatcaatgaagtaggtatggaaacaatgaagcataaacctgtaattcctaatgtggaactctccgagagtacatcacaccgttcaacctccagacaagcatcagatattcaacagtacaggaatgtagatgttttctttgcaccttcagttgttccaagttcaacaacaatgaatttgaaccatcgatcacaattgaaagaaaacgttcatgatgagaataaagttctattgccaaaagtatcacagaatactgctgttggtgaaaatattgcaacttcttccagtacagttctcaagaaacatcttgcacaggggtcttcatcgacagttagagatgtaattattctcagtgatgatgaagattagcaaacccccataccatatcacaaacggtaacaagcatttatatgtcagttctctgctgtaagtttgctgattgtaaaacttgaattatgtaacatgactgggaaatgctctttcaactcaatcttggcactttgtttcgtgtatatctgttctggtactctttttgtttaatcgaatcaacagctattgacatttaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0250I21.2" temp_strand="-" temp_description="C06HBa0250I21.2  AC209512.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0250I21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="78918" stop="77618"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78618" g_stop="77919" g_length="700"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="700" r_length="700" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="701" polyA_stop="715"/>
      <MATCH_line gen_id="C06HBa0250I21.2" gen_strand="-" ref_id="SGN-E553854" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0250I21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E553854" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78618" e_stop="77919"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAGGTATTTGCTTATACGGTATGAAATAGATGAGTTGAACATCATGGTTGAAGATTTGGATCGAAAAGTAAGTGCAGTTCATAACAGGGCAAAAGAAAAACTTGGATTGCCTGTATCCGATGTTTCTAAAGATGCTATCAATGAAGTAGGTATGGAAACAATGAAGCATAAACCTGTAATTCCTAATGTGGAACTCTCCGAGAGTACATCTCACCGTTCAACCTCCAGACAAGCATCAGATATTCAACAGTACAGGAATGTAGATGTTTTCTTTGCACCTTCAGTTGTTCCAAGTTCAACAACAATGAATTTGAACCATCGATCACAATTGAAAGAAAACGTTCATGATGAGAATAAAGTTCTATTGCCAAAAGTATCACAGAATACTGCTGTTGGTGAAAATATTGCAACTTCTTCCAGTACAGTTCTCAAGAAACATCTTGCACAGGGGTCTTCATCGACAGTTAGAGATGTAATTATTCTCAGTGATGATGAAGATTAGCAAACCCCCATACCATATCACAAACGGTAACAAGCATTTATATGTCAGTTCTCTGCTGTAAGTTTGCTGATTGTAAAACTTGAATTATGTAACATGACTGGGAAATGCTCTTTCAACTCAATCTTGGCACTTTGTTTCGTGTATATCTGTTCTGGTACTCTTTTTGTTTAATCGAATCAACAGCTATTGACATTTA</genome_strand>
        <mrna_strand>GAGAGGTATTTGCTTATACGGTATGAAATAGATGAGTTGAACATCATGGTTGAAGATTTGGATCGAAAAGTAAGTGCAGTTCATAACAGGGCAAAAGAAAAACTTGGATTGCCTGTATCCGATGTTTCTAAAGATGCTATCAATGAAGTAGGTATGGAAACAATGAAGCATAAACCTGTAATTCCTAATGTGGAACTCTCCGAGAGTACATCACACCGTTCAACCTCCAGACAAGCATCAGATATTCAACAGTACAGGAATGTAGATGTTTTCTTTGCACCTTCAGTTGTTCCAAGTTCAACAACAATGAATTTGAACCATCGATCACAATTGAAAGAAAACGTTCATGATGAGAATAAAGTTCTATTGCCAAAAGTATCACAGAATACTGCTGTTGGTGAAAATATTGCAACTTCTTCCAGTACAGTTCTCAAGAAACATCTTGCACAGGGGTCTTCATCGACAGTTAGAGATGTAATTATTCTCAGTGATGATGAAGATTAGCAAACCCCCATACCATATCACAAACGGTAACAAGCATTTATATGTCAGTTCTCTGCTGTAAGTTTGCTGATTGTAAAACTTGAATTATGTAACATGACTGGGAAATGCTCTTTCAACTCAATCTTGGCACTTTGTTTCGTGTATATCTGTTCTGGTACTCTTTTTGTTTAATCGAATCAACAGCTATTGACATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E551661" ref_strand="+" ref_description="SGN-E551661 [cTSB-1-H10]">
      <seq>gagaggtatttgcttatacggtatgaaatagatgagttgaacatcatggttgaagatttggatcgaaaagtaagtgcagttcataacagggcaaaagaaaaacttggattgcctgtatccgatgtttctaaagatgctatcaatgaagtaggtatggaaacaatgaagcataaacctgtaattcctaatgtggaactctccgagagtacatctcaccgttcaacctccagacaagcatcagatattcaacagtacaggaatgtagatgttttctttgcaccttcagttgttccaagttcaacaacaatgaatttgaaccatcgatcacaattgaaagaaaacgttcatgatgagaataaagttctattgccaaaagtatcacagaatactgctgttggtgaaaatattgcaacttcttccagtacagttctcaagaaacatcttgcacaggggtcttcatcgacagttagagatgtaattattctcagtgatgatgaagattagcaaacccccataccatatcacaaacggtaacaagcatttatatgtcagttctctgctgtaagtttgctgattgtaaaacttgaattatgtaacatgactgggaaatgctctttcaactcaatcttggcactttgtttcgtgtatatctgttctggtactctttttgtttaatcgaatcaacagctattgacatttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0250I21.2" temp_strand="-" temp_description="C06HBa0250I21.2  AC209512.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0250I21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="78918" stop="77618"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78618" g_stop="77919" g_length="700"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="700" r_length="700" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="701" polyA_stop="716"/>
      <MATCH_line gen_id="C06HBa0250I21.2" gen_strand="-" ref_id="SGN-E551661" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0250I21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E551661" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78618" e_stop="77919"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAGGTATTTGCTTATACGGTATGAAATAGATGAGTTGAACATCATGGTTGAAGATTTGGATCGAAAAGTAAGTGCAGTTCATAACAGGGCAAAAGAAAAACTTGGATTGCCTGTATCCGATGTTTCTAAAGATGCTATCAATGAAGTAGGTATGGAAACAATGAAGCATAAACCTGTAATTCCTAATGTGGAACTCTCCGAGAGTACATCTCACCGTTCAACCTCCAGACAAGCATCAGATATTCAACAGTACAGGAATGTAGATGTTTTCTTTGCACCTTCAGTTGTTCCAAGTTCAACAACAATGAATTTGAACCATCGATCACAATTGAAAGAAAACGTTCATGATGAGAATAAAGTTCTATTGCCAAAAGTATCACAGAATACTGCTGTTGGTGAAAATATTGCAACTTCTTCCAGTACAGTTCTCAAGAAACATCTTGCACAGGGGTCTTCATCGACAGTTAGAGATGTAATTATTCTCAGTGATGATGAAGATTAGCAAACCCCCATACCATATCACAAACGGTAACAAGCATTTATATGTCAGTTCTCTGCTGTAAGTTTGCTGATTGTAAAACTTGAATTATGTAACATGACTGGGAAATGCTCTTTCAACTCAATCTTGGCACTTTGTTTCGTGTATATCTGTTCTGGTACTCTTTTTGTTTAATCGAATCAACAGCTATTGACATTTA</genome_strand>
        <mrna_strand>GAGAGGTATTTGCTTATACGGTATGAAATAGATGAGTTGAACATCATGGTTGAAGATTTGGATCGAAAAGTAAGTGCAGTTCATAACAGGGCAAAAGAAAAACTTGGATTGCCTGTATCCGATGTTTCTAAAGATGCTATCAATGAAGTAGGTATGGAAACAATGAAGCATAAACCTGTAATTCCTAATGTGGAACTCTCCGAGAGTACATCTCACCGTTCAACCTCCAGACAAGCATCAGATATTCAACAGTACAGGAATGTAGATGTTTTCTTTGCACCTTCAGTTGTTCCAAGTTCAACAACAATGAATTTGAACCATCGATCACAATTGAAAGAAAACGTTCATGATGAGAATAAAGTTCTATTGCCAAAAGTATCACAGAATACTGCTGTTGGTGAAAATATTGCAACTTCTTCCAGTACAGTTCTCAAGAAACATCTTGCACAGGGGTCTTCATCGACAGTTAGAGATGTAATTATTCTCAGTGATGATGAAGATTAGCAAACCCCCATACCATATCACAAACGGTAACAAGCATTTATATGTCAGTTCTCTGCTGTAAGTTTGCTGATTGTAAAACTTGAATTATGTAACATGACTGGGAAATGCTCTTTCAACTCAATCTTGGCACTTTGTTTCGTGTATATCTGTTCTGGTACTCTTTTTGTTTAATCGAATCAACAGCTATTGACATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E561946" ref_strand="+" ref_description="SGN-E561946 [20572]">
      <seq>gtaattctgtggctgttgggaatgagtctgagcaaggtcctatccaggttgcttctacatcaataattattagcacaggaaagcttaagagttctgttaggcgtaagccttggatacttgatgatcatgttgatcacatggaagtggattttgaatgtgaagctgacaagggttcttcttcacgtgcttatcttcccaaaggagtgatccgtggatgttccagttgtcacaactgccagaaggttattgcaagaagtcgtccggaatcggcacggatcccttcacttgatgaagctcctgtactccatcctactgaagaggagtttaaagatactctcaagtatgttgcaagcatccttccacatgtcaagcagtatggagtatgccgtattgttcctccctcttcctggaaaccaccttgccgcattgaagaagaggacacgaggtgtggagtcgacactcgtatccagcgcattagtgggctccagagtctgtttttaaagaaaagacttgagggagcccataagaagacgaataatagatggcagaaaatcccaagtatgaagacagagtttggacacagcgtggaacttaaagaatttggttgttgtaatgaacactttgaatttgaaagtgggccaaagtttaacctgaagtctttcaagaattacgctgatcatttcaagaggcagtactttgtcaaggaagatcaatcacagcttcaactttaattcaattcgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0250I21.2" temp_strand="-" temp_description="C06HBa0250I21.2  AC209512.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0250I21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="85946" stop="81750"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85646" g_stop="85477" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="0.941"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85476" i_stop="82886" i_length="2591">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="0.999" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82885" g_stop="82814" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="242" r_length="72" r_score="0.944"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82813" i_stop="82663" i_length="151">
            <donor d_prob="0.968" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82662" g_stop="82585" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="320" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82584" i_stop="82476" i_length="109">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.461" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82475" g_stop="82050" g_length="426"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="743" r_length="423" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0250I21.2" gen_strand="-" ref_id="SGN-E561946" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>746</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0250I21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E561946" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85646" e_stop="85477"/>
          <exon e_start="82885" e_stop="82814"/>
          <exon e_start="82662" e_stop="82585"/>
          <exon e_start="82475" e_stop="82050"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAACTCTGTGGCTGTTGGGAATGAGTCTGAGCAAGGTCCTGTCCAGGTTGCTTCTACAGCCACAATTATTAGCACAGGAAAGCTTAAGAGTTCTGTTAGGCGTAGGCCTTGGATACTTGATGATCATGTTGATCACATGGAAGAGAATTTTGAATGTGAATCTGATAAGGTCAGTAAGATTTTCATAAAATTTTCTCATAAATCCTTTTTTTTTTATTTCCATACGTAGTATCAACATATTGATGATGGATTTCAATTAAATTGATTAAACTATAAGTTTTGATTTTGTCTCACCTTCAATATGTACACTGCTGTAAAAGAATTCCCCTTGTGGTGTTCATTGAGAAGGCAGGAAAAGAAGAGTGAAGTCCACAGCTGATGCTTCTGGTTGGACCGTACGAGATAAACATATCTGGTGAGAGATGCATATAGGGATAATATTTTTGGGCTTTGCCGATGATTATTCCTGTTGACCATATGCATCCTTGTGTTCTTGGAACAAGATGAATACTGTTAACGGACAAAAACACTGGGCGATTTCTTCTCATCTGTCCTTGCCTTAGTGGACAGAGTTACCAAGTACCTGCACTGGAAGGAAGTGACAAATATCCTTAGGAATTAGTCGAGGTGCGTACAAATTGGCCCAGACACCATAGTCATCAAAAAGAAAGTTGTGTCAAGTGTGTTATCAAAGGCGAAAAGCGCAAAAAAGCTTTAAAGTCCATGAGGGCTTTAAGCGCAAATAAAACGTGGGCTTTAATGAAAAAAGGCGCAAAGGGAGAAAAGAGTACAAATATATATGTTTAGTCCAAAATTAATAATTATAAACATGAATGTCAAATATATGACCGAAGAAATTGAAATTTTTTTATGATAAAGTAAAATATCTATTATTTAGTGTCACTTCTTCATGCGAAGCTCATTGGCAAGGAAACATTTGTCTTAGAACCTTGATGAAGACACTGAAGCGCACATAAAGCGAGGCGAAGCGCTCAACACATTTGAGCCTCGCTTAAGGGCTTAAGCGCGCCTTTAATAACACTGGTGTCAACTGTCAGGTGATTAGAAGTAGGAAGAAATGGAGTATTTCTTCAAGATATTTCATATTTATGGCCAAGTGGTATAGCAAGATGAGGACAGAATGGTATGTTAAGGCCCTGGTGCAAAATGTGATTGCTTTGCAGTGCAATCTTGCTATAGGTATCTGAAAATATGTTTGTAAGTCAGAACCAGAAAAGTGGTTTCCTTTGCATAGTATGCTGTGTGAGACACTATTTAGAGAGGAAGGGTTTGTATAAACCTGAATTACTGTTGTATGCGCTAGAAAGAAGGGGAGGTCCCTAATCTTATGTTTCTTCATTATCGCAATGGAGCCGAGTTGGACTCTTGTCGTGTTCAATATATCATGGGTATTACCTTGAGCTGGGGTTCTCAAGCTCAGGAAAAGGAGATAGTCTCACTGTCATTAGATTGTGTATCAACATGAGCCAACGTCAGCAGAAAGGAGGAGAAGACGGAAGGCTGTATTCAAAATCTATGTCAGAATTGGCCGGTGCAAAGATAATCATTGATGCTGGGAGTTTGGATAACATTGCGTCCACGGAGATGGCAAATCAGTTGGGGCTATATATGCCTTTGCAACATGGAAGTTAAGCTAAATAAGGAAAGAAAAGGAGGATATCTAAAGGGGTGGATAGTTTTTTGGGAGCTCTACAACTGAGCATTTGTACCTACTAACCCTTGCATCATCTTCTTGCACATTTATGAATTTTCTTTTTGATTTATCGAGAGAAAAGTTGTATCTACTGATAAGGTTTTATTCTCTGTTTGTCCCGCACTATACAGGGGACGGGCCAAATGGTGAATTCTTTTGCTCCTTTACTTGTCAATAAGGGAACTAGTATATGTAGACAGTAGTTAATATGGAAGTATATATATATATGGACCTAACCTTAAATCTGAATCGTAGTGTCCCTGGATGTTCAGCCTTGGTCGCCCATACTATCCACCTACGTTCCTCAAAAGCTTGTACTATTAAGTTAGCTCTTCTCTGGTTATGAAATGAGAGGTACTAACTACTCCTAAATCCTAATAAATGTGCTTGTTAAGAAAATGTACTTTGAGCCTAACTCTACCTCGAAAAGAAGTTCATTAGATAGGGAATTGTCCAAGAGAGCAAGATCATATAATAAGACAACATCCCTTTCCCTCAACATATGTGGGACTCCAACAATCCCATGTGTTCCTAACCATGGCCATTTGGAGCATGGATGACATAATATTATGCCCAAACAAATCAACAAGAGGATGTATGGCTTTGATACCATGTTAAGAAAATGAACTTTGAGCCTAAGTCAAACATAAAATGGTAGCCCGTTAGGTGAGGGTTGTCCAAAACAATATAAGGGGACAATAATCAATTCCCTCAATCAATGTGGGACACTGTAACTGTGTTGATGGGCTTTATTAAGACATAAATCTTGGAATGTGTGCTCCGAGTATTGGTCAAGGATGATTTTCTTTCCTGTTACTCTACAGATATACTTTTTTTCATTTGATTGTCTCATACATTACTTGTAAGCTAAGGGCTGCCCATTGATCTACTGAGCCTGAGGCCTCTCAGTTGCATCTTCTCTTGTAGAGGCTGGTCAAAGAATGTGGCAGCATATACTGTTTCTGTGTAATTGTTGGCTTGTGGCACTGCTAGTTAGAATAATGGTTTGGTCATTTGATTATCTCTGGGTTGAATTTATTTTTCAGGGTTCGTCTTCACACGCTTATCTTCCCAGAGGAGTGATCCGTGGATGTTCCAGTTGTCACAACTGCCAGAAGGTTCATTCTTCCTTAATATTGTATAATGTTTGGTTTCAAGGCAAGGATTAAATGTTCTCTATCCAAAAGTTAATTGCTATCATCTGTCTTGTCATTTATTTTTTTCAGTTTACATTGAGCTTATGATGTTTGTGGTATGCATTTTCAAAAGGTTATTGCAAGAAGTCGTCCGGAATCGGCACGGATCCCTTCACTTGATGAAGCTCCTGTACTCCATCCTACTGAAGAGGTATTCCTTAACACTCCCATCTTTCTTTCAGCCTGCTATATGCCCTCTATTGGATCATGAACAGGTACCCTGCCACATTCTGCTTTCATGAAGTTATATCTTATGCTAGGAATTTAAAGATACTCTCAAGTACGTTGCAAGCATCCTTCCACATGTCAAGCAATATGGAGTATGCCGTATTGTTCCTCCCTCTTCCTGGAGACCACCTTGCCGCATTGAAGAAGAGGACACGAGGTGTGGAGTCAACACTCGTATCCAGCGCATTAGTGACCTCCAGAGTCTGTTTTTAAAGATGAGACTTGAGGGAGCCCATAAGAAGACTAATAATAGGCGGCAGAAAATCCCAAGTATGAAGCCAGAGTTTGGACACAGCGTGGAACGTAAAGAATTTGGTTGTTGTGATGAACACTTTGAATTTGAAAGTGGACCAAAGTTTAAGTTGAAGTCTTTCAAGAATTACGCTGATCATTTCAAGAGGCAGTACTTTGTCAAGGAAGATCAGATCACAGCTTCAAACTTCAATTCAGATGCAATG</genome_strand>
        <mrna_strand>GTAATTCTGTGGCTGTTGGGAATGAGTCTGAGCAAGGTCCTATCCAGGTTGCTTCTACATCAATAATTATTAGCACAGGAAAGCTTAAGAGTTCTGTTAGGCGTAAGCCTTGGATACTTGATGATCATGTTGATCACATGGAAGTGGATTTTGAATGTGAAGCTGACAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCTTCTTCACGTGCTTATCTTCCCAAAGGAGTGATCCGTGGATGTTCCAGTTGTCACAACTGCCAGAAG.......................................................................................................................................................GTTATTGCAAGAAGTCGTCCGGAATCGGCACGGATCCCTTCACTTGATGAAGCTCCTGTACTCCATCCTACTGAAGAG.............................................................................................................GAGTTTAAAGATACTCTCAAGTATGTTGCAAGCATCCTTCCACATGTCAAGCAGTATGGAGTATGCCGTATTGTTCCTCCCTCTTCCTGGAAACCACCTTGCCGCATTGAAGAAGAGGACACGAGGTGTGGAGTCGACACTCGTATCCAGCGCATTAGTGGGCTCCAGAGTCTGTTTTTAAAGAAAAGACTTGAGGGAGCCCATAAGAAGACGAATAATAGATGGCAGAAAATCCCAAGTATGAAGACAGAGTTTGGACACAGCGTGGAACTTAAAGAATTTGGTTGTTGTAATGAACACTTTGAATTTGAAAGTGGGCCAAAGTTTAACCTGAAGTCTTTCAAGAATTACGCTGATCATTTCAAGAGGCAGTACTTTGTCAAGGAAGATCA-ATCACAGCTTC-AACTTTAATTCA-ATTCGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E589572" ref_strand="+" ref_description="SGN-E589572 [43150]">
      <seq>gtttagatgtggcatatgaggtaaaagatgtcattgattcaattattgttagagataatggtctcttacatcttattttctcacttccctttaccataaataagatcaagcttatcaaagaggatatctccaatttacatgagaagattcccaagaacagaggtcacatcgttgtgaactctcccaagacaccagttgagaacaagtcattgacaactgataaaataattgtaggttttgaggaggagacaaacttgatacttagaaagctcaccagtggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0250I21.2" temp_strand="+" temp_description="C06HBa0250I21.2  AC209512.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0250I21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="91898" stop="92780"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92198" g_stop="92480" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="282" r_length="282" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0250I21.2" gen_strand="+" ref_id="SGN-E589572" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>283</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0250I21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E589572" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92198" e_stop="92480"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCTAGATGTGGCTTATGAGGCAAAAGATGTCATAGATTCAATTATTGTTCGAGATAATGGTCTCTTACATCTTATTTTCTCACTTCCCATTACCATAAAGAAGATCAAACTTATCAAAGAAGAGATCTCTGCTTTAGATGAGAACATTCCCAAGGACAGAGGTCTAATCGTTGTGAACTCTCCCAAGAAACCAGTTGAGAGAAAGTCATTGACAACTGATAAAATAATTGTAGGTTTTGAGGAGGAGACAAACTTGATACTTAGAAAGCTCACCAGTGGAC</genome_strand>
        <mrna_strand>GTT-TAGATGTGGCATATGAGGTAAAAGATGTCATTGATTCAATTATTGTTAGAGATAATGGTCTCTTACATCTTATTTTCTCACTTCCCTTTACCATAAATAAGATCAAGCTTATCAAAGAGGATATCTCCAATTTACATGAGAAGATTCCCAAGAACAGAGGTCACATCGTTGTGAACTCTCCCAAGACACCAGTTGAGAACAAGTCATTGACAACTGATAAAATAATTGTAGGTTTTGAGGAGGAGACAAACTTGATACTTAGAAAGCTCACCAGTGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E544869" ref_strand="+" ref_description="SGN-E544869 [TUS-67-G20](-)">
      <seq>atcatccagggagaagaatggaacatgggggaggaagacacctttgagaatctcaaatttttgaagtggggtttacggacttttttcaagtgggaggttggagagaaatccttccccaatcttgagaaactaaaactgcaggaatgtggtaagcttgaggagattccccctagttttggagatatttattcattgaaatttatggaaattgtaaatagtcctcaacttgaagattctgctctcaagattaaggaatacgttgaagagatgagaggagggagcgagcttcagatccttggccagaagaatatccccttatttaagtagcattagggttgaaaagtagattgtactttgcagggtacattgtatatgattaagaaaactttgttgcagttatgaaatatttttgtggatttctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0250I21.2" temp_strand="+" temp_description="C06HBa0250I21.2  AC209512.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0250I21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="93903" stop="102946"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94203" g_stop="94659" g_length="457"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="457" r_length="457" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0250I21.2" gen_strand="+" ref_id="SGN-E544869" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>457</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0250I21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E544869" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94203" e_stop="94659"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCATCCATGGAGAAGAATGGAACATGGGGGAGGAAGACACCTTTGAGAATCTCAAATTTTTGAACTTGCGTCTACCGACTCTTTCCAAGTGGGAGGTTGGAGAGGAATCCTTCCCCAATCTTGAGAAATTAAAACTGCAGGAATGTGGTAAGTTTGAGGAGATTCCACCTAGTTTTGGAGATATTTATTCATTGAAATTTATCAAAATTGTAAAGAGTCCTCAACTTGAAGATTCTGCTCTCAAGATTAAGGAATACGCTGAAGAAATGAGAGGAGGGAGCGAGCTTCAGATCCTTGGCCAGAAGAATATCCCCTTATTTAAGTAGCATTATGGTTGAAAAGTAGATTGTACTTTGCAGGGTACATTGTATATGATTAAGAAAACTTTGTTGCAGTTATGAAATATTTTTGTGGATTTCTCAAAGTTTCTTCAACAAAAATTATAATTTTTATAAA</genome_strand>
        <mrna_strand>ATCATCCAGGGAGAAGAATGGAACATGGGGGAGGAAGACACCTTTGAGAATCTCAAATTTTTGAAGTGGGGTTTACGGACTTTTTTCAAGTGGGAGGTTGGAGAGAAATCCTTCCCCAATCTTGAGAAACTAAAACTGCAGGAATGTGGTAAGCTTGAGGAGATTCCCCCTAGTTTTGGAGATATTTATTCATTGAAATTTATGGAAATTGTAAATAGTCCTCAACTTGAAGATTCTGCTCTCAAGATTAAGGAATACGTTGAAGAGATGAGAGGAGGGAGCGAGCTTCAGATCCTTGGCCAGAAGAATATCCCCTTATTTAAGTAGCATTAGGGTTGAAAAGTAGATTGTACTTTGCAGGGTACATTGTATATGATTAAGAAAACTTTGTTGCAGTTATGAAATATTTTTGTGGATTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E544870" ref_strand="+" ref_description="SGN-E544870 [TUS-67-G20]">
      <seq>atcatccagggagaagaatggaacatgggggaggaagacacctttgagaatctcaaatttttgaacttgcgtctaccgactctttccaagtgggaggttggagaggaatccttccccaatcttgagaaactaaaactgcaggaatgtggtaagcttgaggagattccacctagttttggagatatttattcattgaaatttatcgaaattgtaaatagtcctcaacttgaagattctgctctcaagattaaggaatacgctgaagagatgagaggagggagcgagcttcagatccttggccagaagaatatccccttatttaagtagcattatggttgaaaagtagattgtactttgcagggtacattgtatatgattaagaaaactttgttgcagttatgaaatatttttgtggatttctcannnnanaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0250I21.2" temp_strand="+" temp_description="C06HBa0250I21.2  AC209512.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0250I21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="93903" stop="94925"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94203" g_stop="94627" g_length="425"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="425" r_length="425" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="428" polyA_stop="457"/>
      <MATCH_line gen_id="C06HBa0250I21.2" gen_strand="+" ref_id="SGN-E544870" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>425</cumulative_length_of_scored_exons>
        <coverage percentage="0.930" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0250I21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E544870" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94203" e_stop="94627"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCATCCATGGAGAAGAATGGAACATGGGGGAGGAAGACACCTTTGAGAATCTCAAATTTTTGAACTTGCGTCTACCGACTCTTTCCAAGTGGGAGGTTGGAGAGGAATCCTTCCCCAATCTTGAGAAATTAAAACTGCAGGAATGTGGTAAGTTTGAGGAGATTCCACCTAGTTTTGGAGATATTTATTCATTGAAATTTATCAAAATTGTAAAGAGTCCTCAACTTGAAGATTCTGCTCTCAAGATTAAGGAATACGCTGAAGAAATGAGAGGAGGGAGCGAGCTTCAGATCCTTGGCCAGAAGAATATCCCCTTATTTAAGTAGCATTATGGTTGAAAAGTAGATTGTACTTTGCAGGGTACATTGTATATGATTAAGAAAACTTTGTTGCAGTTATGAAATATTTTTGTGGATTTCTCAAA</genome_strand>
        <mrna_strand>ATCATCCAGGGAGAAGAATGGAACATGGGGGAGGAAGACACCTTTGAGAATCTCAAATTTTTGAACTTGCGTCTACCGACTCTTTCCAAGTGGGAGGTTGGAGAGGAATCCTTCCCCAATCTTGAGAAACTAAAACTGCAGGAATGTGGTAAGCTTGAGGAGATTCCACCTAGTTTTGGAGATATTTATTCATTGAAATTTATCGAAATTGTAAATAGTCCTCAACTTGAAGATTCTGCTCTCAAGATTAAGGAATACGCTGAAGAGATGAGAGGAGGGAGCGAGCTTCAGATCCTTGGCCAGAAGAATATCCCCTTATTTAAGTAGCATTATGGTTGAAAAGTAGATTGTACTTTGCAGGGTACATTGTATATGATTAAGAAAACTTTGTTGCAGTTATGAAATATTTTTGTGGATTTCTCANN</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E308524" ref_strand="+" ref_description="SGN-E308524 [cLEY-21-L21]">
      <seq>tcatccagggagaagaatggaacatgggggaggaagacacctttgagaatctcaaatttttgaacttgcgtctaccgactctttccaagtgggaggttggagaggaatccttccccaatcttgagaaactaaaactgcaggaatgtggtaagcttgaggagattccacctagttttggagatatttattcattgaaatttatcgaaattgtaaatagtcctcaacttgaagattctgctctcaagattaaggaatacgctgaagagatgagaggagggagcgagcttcagatccttggccagaagaatatccccttatttaagtagcattatggttgaaaagtagattgtactttgcagggtacattgtatatgattaagaaaactttgttgcagttatgaaatatttttgtggatttctcnnnnnaaaaaaaaaaaaaaaaaaaaaataaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0250I21.2" temp_strand="+" temp_description="C06HBa0250I21.2  AC209512.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0250I21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="93904" stop="94924"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94204" g_stop="94627" g_length="424"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="424" r_length="424" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="427" polyA_stop="453"/>
      <MATCH_line gen_id="C06HBa0250I21.2" gen_strand="+" ref_id="SGN-E308524" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="0.936" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0250I21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E308524" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94204" e_stop="94627"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATCCATGGAGAAGAATGGAACATGGGGGAGGAAGACACCTTTGAGAATCTCAAATTTTTGAACTTGCGTCTACCGACTCTTTCCAAGTGGGAGGTTGGAGAGGAATCCTTCCCCAATCTTGAGAAATTAAAACTGCAGGAATGTGGTAAGTTTGAGGAGATTCCACCTAGTTTTGGAGATATTTATTCATTGAAATTTATCAAAATTGTAAAGAGTCCTCAACTTGAAGATTCTGCTCTCAAGATTAAGGAATACGCTGAAGAAATGAGAGGAGGGAGCGAGCTTCAGATCCTTGGCCAGAAGAATATCCCCTTATTTAAGTAGCATTATGGTTGAAAAGTAGATTGTACTTTGCAGGGTACATTGTATATGATTAAGAAAACTTTGTTGCAGTTATGAAATATTTTTGTGGATTTCTCAAA</genome_strand>
        <mrna_strand>TCATCCAGGGAGAAGAATGGAACATGGGGGAGGAAGACACCTTTGAGAATCTCAAATTTTTGAACTTGCGTCTACCGACTCTTTCCAAGTGGGAGGTTGGAGAGGAATCCTTCCCCAATCTTGAGAAACTAAAACTGCAGGAATGTGGTAAGCTTGAGGAGATTCCACCTAGTTTTGGAGATATTTATTCATTGAAATTTATCGAAATTGTAAATAGTCCTCAACTTGAAGATTCTGCTCTCAAGATTAAGGAATACGCTGAAGAGATGAGAGGAGGGAGCGAGCTTCAGATCCTTGGCCAGAAGAATATCCCCTTATTTAAGTAGCATTATGGTTGAAAAGTAGATTGTACTTTGCAGGGTACATTGTATATGATTAAGAAAACTTTGTTGCAGTTATGAAATATTTTTGTGGATTTCTCNNN</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E243215" ref_strand="+" ref_description="SGN-E243215 [cLEE-2-E2]">
      <seq>ttattgtagatgaccaattttttcttcgaatacgaaattaaattacaatacacacaaaaaaaatatttgaattttttttatttaaactaaggaatgaaagaaaaaaacaaaataagaataagaaactcaaattattataataaaagaagtcaaaaaataatttttgtatgaaaaaattaaaatataccttgaactttgatagaagaatcatatatatccctaaatattttttttaaaaaaaaattagaagtaacaaatataaatttaaaactaattttttaactttcgttaaatgaagggtatatgtgagccattttctaacggcaggggtatatgtgagccgtttgtataacgataagggcatatatgaaccacttttattacgagggatatatcagctctaaatgacaaagttgagaggtatatcagacccttttccctattttttaaaatttcatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0250I21.2" temp_strand="+" temp_description="C06HBa0250I21.2  AC209512.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0250I21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="101754" stop="102789"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102063" g_stop="102489" g_length="427"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="441" r_length="429" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0250I21.2" gen_strand="+" ref_id="SGN-E243215" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>427</cumulative_length_of_scored_exons>
        <coverage percentage="0.928" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0250I21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E243215" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102063" e_stop="102489"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCAAATTTTTTCTTCGAATACGAAATTAAATTACAATACAC--AAAAAAATTGTTT-AAATTTTTTTCTTTAAACTAAGTAATGAAAGAAAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAGCGAAGTCAAAAAATAATTTATGTATGAAAAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATACCCCTAAATA-ATTTTTT-AAAAAAAATTACAAGTAATAAATATAAATTTAAAACTAATTTTTTAACTTTCGTTAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAGCCGTTTGAATAACGGTAAGGGCATATATAAACCACTTTTATAACGAGGGGTATATCAGCTCCAAATGACAAAATTGAGGGGTAAATCAGACCCTTTTCCCT</genome_strand>
        <mrna_strand>ACC-AATTTTTTCTTCGAATACGAAATTAAATTACAATACACACAAAAAAAATATTTGAATTTTTTTTATTTAAACTAAGGAATGAAAGAAAAAAACAAAATAAGAATAAGAAACTCAAATTATTATAATAAAAGAAGTCAAAAAATAATTTTTGTATG--AAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATATCCCTAAATATTTTTTTTAAAAAAAAATTAGAAGTAACAAATATAAATTTAAAACTAATTTTTTAACTTTCGTTAAATGAAGGGTATATGTGAGCCATTTTCTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGATAAGGGCATATATGAACCACTTTTATTACGAGGGATATATCAGCTCTAAATGACAAAGTTGAGAGGTATATCAGACCCTTTTCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E747625" ref_strand="+" ref_description="SGN-E747625 [GI|3449379]">
      <seq>tccaatagcttcaacattatttctcaaacaaagggttctctagctaaacttcagccagtgtaaaggtcttgagaaaaagtagaatcatggaaaaacgaaaagatattgaagaagcaaacaactcattggtgttattttctgctcttagcaaggacattgccaatgttctaattttcctagagaatgaggaaaatcaaaaagctcttgacaaagatcaagttgaaaagctaaaattgaaaatggcatttatttgtacatatgttcagctttcttattccgattttgagcagtttgaagatataatgactagaaatagacaagaggttgagaatctgcttcaatcacttttggatgatgatgtccttactagcctcaccagtaatatggatgactgtatcagcttgtatcatcgttcttataaatcagatgccatcatgatggatgagcaattggacttcctcctcttgaatctgtatcatctatccaagcatcacgctgaaaagatatttcctggagtgactcaatatgaagttcttcagaatgtatgtggcaacataagagatttccatgggttgatactgaatggttgcattaagcatgagatggttgagaatgtcttacctctgtttcaactcatggctgaaagagtaggacacttcctttgggaggatcagactgatgaagactctcggctctccgagctagatgaggatgaacacaatgatagagactctcgactcttccagctaacacatctactcttgaagattgttccaactgaactggaggttatgcacatatgttatacaaatttgaaagcttcaacttcagcagaagttggacgcttcattaagaagctcctggaaacctcaccggatattctcagagaatatatcattcaactacaagagcatatgttaactgttattccccctagcactttaggggctcgaaacattcatgtcatgatggaattcctattacttattctttctgatatgcccaaggactttattcatcatgacaaactttttgatctcttggctcatgttggaacacttaccagggaggtatcgactcttgtacgtgacttggaagagaaattaaggaataaagagggtaataaccaaacaaattgtgcaaccctagacttgctggaaaatattgaactcctcaagaaagatctcaaacatgtttatctgaaagccccaaattcatctcaatgttgcttccccatgagtgatggaccactcttcatgcatcttctacacatgcacttaaatgatttgctagattctaatgcttattcaatttctttgataaaggaagaaatcgagttggtgagtcaagaactggaattcataagatcattctttggggatgctgctgagcaaggattgtataaagatatctgggcacgtgttctagatgtggcttatgaggcaaaagatgtcatagattcaattattgttcgagataatggtctcttacatcttattttctcacttcccattaccataaagaagatcaaacttatcaaagaagagatctctgctttagatgagaacattcccaaggacagaggtctaatcgttgtgaactctcccaagaaaccagttgagagaaagtcattgacaactgataaaataattgtaggttttgaggaggagacaaacttgatacttagaaagctcaccagtggacccgcagatttagatgtcatttcgatcaccggtatgccgggttcaggtaaaactactttggcatacaaagtatacaatgataagtcagtttctagacattttgaccttcgtgcatggtgcacggtcgatcaaggatatgacgacaagaagttgttggatacaattttcagtcaagttagtggctcagattcaaatttgagtgagaatattgatgttgctgataaattgcggaaacaactgtttggaaagaggtatcttattgtcttagatgatgtgtgggatactactacattggatgagttgacaagaccttttcctgaagctaagaaaggaagtaggattattttgacaactcgagaaaaggaagtggctttgcatggaaagctgaacactgatcctcttgaccttcgattgctaagaccagatgaaagttgggaacttttagataaaaggacatttggtaatgagagttgccctgatgaactattagatgtcggtaaagaaatagccgaaaattgtaaagggcttcctttggtggctgatctgattgctggagtcattgctgggagggaaaagaaaaggagtgtgtggcttgaagttcaaagtagtttgagttcttttattttgaacagtgaagtggaagtgatgaaagttatagaattaagttatgaccatttaccacatcacctcaagccatgcttgcttcactttgcaagttggccgaaggacactcctttgacaatctatttgtttactgtttatttgggtgctgaaggatttgtggaaaagacggagatgaagggtatagaagaagtggtgaagatttatatggatgatttaatttccagtagcttggtaatttgtttcaatgagataggtgatatactgaatttccaaattcatgatcttgtgcatgacttttgtttgataaaagcaagaaaggaaaatttgtttgatcggataagatcaagtgctccatcagatttgttgcctcgtcaaattaccattgattatgatgaggaggaggagcactttgggcttaattttgtcatgttcgattcaaataagaaaaggcattctggtaaacacctctattctttgaggataaatggagaccagctggatgacagtgtttctgatgcatttcacctaagacacttgaggcttattagagtgttggacctggaaccctctttaatcatggtgaatgattctttgctgaatgaaatatgcatgttgaatcatttgaggtacttaagaattcggacacaagttaaatatctgcctttctctttctcaaacctctggaatctagaaagtctgtttgtgtctaacaaaggatcaatcttggtactattaccgagaattttggatcttgtaaagttgcgagtgctgtccgtgggtgcttgttctttctttgatatggatgcagatgaatcaatattgatagcaaaggacacaaagttagagaacttgagaatattaggggaactgttgatttcctattcgaaagatacaatgaatattttcaaaaggtttcccaatcttcaggtgcttcagtttgaactcaaggagtcatgggattattcaacagagcaacattggttcccgaaattggattgcctaactgaactagaaacactctgtgtaggttttaaaagttcaaacacaaaccactgtgggtcctctgttgtgacaaatcggccgtgggattttcacttcccttcaaatttgaaagaactgttgttgtatgactttcctctgacatccgattcactatcaacaatagcgagactgcccaaccttgaaaatttgtccctttatgatacaatcatccagggagaagaatggaacatgggggaggaagacacttttgagaatctcaaatttttgaacttgcgtctactgactctttccaagtgggaggttggagaggaatccttccccaatcttgagaaattaaaactgcaggaatgtggtaagcttgaggagattccacctagttttggagatatttattcattgaaatttatcaaaattgtaaagagtcctcaacttgaagattctgctctcaagattaagaaatacgctgaagatatgagaggagggaacgatcttcagatccttggccagaagaatatccccttatttaagtagcattttggttgaactttgcttggtgatattgtatatgattaaaatatcctgtgatgagattcctcttagtttcttttaacaaaaaatataatttttataagtacaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0250I21.2" temp_strand="+" temp_description="C06HBa0250I21.2  AC209512.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0250I21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="108425" stop="114333"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108725" g_stop="108789" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="65" r_length="65" r_score="0.938"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108790" i_stop="110076" i_length="1287">
            <donor d_prob="0.974" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110077" g_stop="110139" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="66" r_stop="128" r_length="63" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110140" i_stop="110214" i_length="75">
            <donor d_prob="0.971" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="110215" g_stop="114034" g_length="3820"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="3966" r_length="3838" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="3967" polyA_stop="3982"/>
      <MATCH_line gen_id="C06HBa0250I21.2" gen_strand="+" ref_id="SGN-E747625" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>3948</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0250I21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E747625" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108725" e_stop="108789"/>
          <exon e_start="110077" e_stop="110139"/>
          <exon e_start="110215" e_stop="114034"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAATAGGTTCAGCATTATTTCTCAAACAAAGGGTTCTGTAGCTAAACTTCAGCCTGTGTAAAGGTACCATCTTCTTCTTTGCTAAACTTTATTCGCAGCAGAATAACATGAAAATGGTTAAGATCTAGCTTTTTGTTGTTCTCCTTTCAACAAAAACTACTCATTTGTATTTTAGTAATCTTGCACTTTTGGTATTTAAAGGACTTGTGAAGTCAATGAATTGTATTTTAGTAATCTTTGTTTGAATTCTAGATCTAGCTATTTGATTAGTCTCCTTTCAACCAAACTACTTCTTCGATCTCTTACTTCAACAAAAATATGTCAAAAAGGTGTGAACATGCTTAATCTATTGATTCTACTTCAGCTACTCTCAGAAAAAATCTTTTTCCATTAGCCCAAGTCGAGATAGGAGAAAAATAATATTATTAGAGAGATTATTAATCTAATGACATTTTACTTAATTTTAATCAAAATAAGGGAATAATATCCCGTTATTTAACTAGCTTTTAAGCATTATGGGTGGAAAGTAGAAAGAAGAAACATAGCAGAATAGACAGTAAGTTATGCTTTAATGAGTAGATCTGTATATGATTACATATTTGTTTGACTTTTCGGTGTTTCGATTAGAAAACTTACAAGTTTTTTAAAACATGTATCATTTGTTGATTTGTCCGTTTGGCACGTCATCACATATGAGTATGTCCATGAGACACACCGATGTCAAGTATAGATTTCTACTTGATCATACACAACTTTATCTGAGGTTGATGCCAAATCTAAAGCTGATATTTTAAACATTAATCTTATACACGAAAACATCATTCCTATTACTGTTTTCTTTACCTTTACCTTATAGACTTTTTGGCAGAAAAAAGTTAGACAGATACATTTGATGATGTTTACCATTCTCATTCTCTCTTTATTTTATTTTCTTTACATTCACACGCACAATAATTTTCTTGTAGGCTCCTTATATGCCATATACACATAGACGAATCTAGGATTTGATATTTACTAGTTTCTATGTCGACGTCATATTAATATCAATAATAATTAGATTGACAATCACATATTTATAATTATTAAGTCGATAACTTTCTTCTTTGTATAGGTTGGAAAAGTAATGGTAAACGAGCAGGACTCCTTTTTCTTTTTTTGTAAATAATTAACAGTTGTGAGATTTTATGTTTGTGACTTCATGTCATAAACATTTTTATGTGTGATTAAGATTGACATTTCCAATTGTGCGAGTCTAAAATTACTATATGTGAAAATAGTGATATTATTGATTATTCGTATCTTTTCATCTTCTTTCTCCTGTTAAAGTTTTAGCTACTTTTTATTCATCAGGTCTTGAGAAAAAGTAGAATCATGGAAAAACGAAAAGATAATGAAGAAGCAAACAACTCATTGGTATGTTATTTTATAGAGTAAACTGTAAAGTATTGAATTATAGATATGTGGCTTTAAAATGTATTATTTTGGCAGGTGTTATTTTCTGCTCTTAGCAAGGACATTGCCGATGTTCTGGTTTTCCTAGAGAATGAGGAAAATCAAAAATCTCTTGACAAAGATGAAGTTGAAAATCTAAAATTGAAAATGGCATTTATTTGTACATATGTTCAGCTTTCTTATTCCGATTTTGAGCAGTTTGAAGATATAATGACGAGAAAAAGACAACAGGTTGAGAATCTGCTTCAATCACTTTTGGATGATGATGTCCTTACTAGCCTCACCAGTAATATGGATGACTGTATCAGCTTGTATCATCGTTCTTATAAATCAGATGCCATCATGATGGATGAGCAATTGGACTTCCTCCTCTTGAATCTGTATCATCTATCCAAGCATCACGCTGAAAAGATATTTCCTGGAGTGACTCAATATGAAGTTCTTCAGAATGTATGTGGCAACCTAAGAGATTTCCATGGGTTGATAGTGAATGGTTGCATTAAGCATGAGATGGTTGAGAATGTCTTACCTCTGTTTCAACTGATGGCTGAAAGAGTAGGACACTTCCTTTGGGAGGATAAGACTGATGAAGA---------CT-C--G---GATGAGGATGATCAGAATGATAGAGACTCTCGACTCTTCCAGCTAACACATCTACTCTTGAAGATTGTTCCAACTGAACTGGAGGTTATGCACATATGTTATACAAATTTGAAAGCTTCAACTTCAGCAGAAGTTGGACGCTTCATTAAGAAGCTCCTGGAAACCTCACCGGATATTCTCAGAGAATATATCATTCAACTACAAGAGCATATGATAACTGTTATTCGCCCTAGCACTTCAGGGGCTCGAAACATTCATGTCATGATGGAATTCCTATTACTTATTCTTTCTGATATGCCCAAGGACTTTATTCATCATGACAAACTTTTTGATCTCTTGGCTCATGTCGGAGTACTTACCAGGGAGGTATCAACTCTTGTACGTGACTTGGAAGAGAAATTAAGGAATAAAGAGGGTAATAACCAAACAAATTGTGCAACCCTAGACTTGCTGGAAAATATTGAACTCCTCAAGAAAGATCTCAAACATGTTTATCTGAAAGCCCCGGATTCATCTCAATGTTGCTTCCCCATGAGTGATGGACCACTCTTCATGCATCTTTTACACATGCACTTAAATGATTTGCTAGATTCTAATGCTTATTCAATTTCTTTGATAAAGGAAGAAATCGAGTTGGTGAAACAAGACCTGGAATTCATAAGATCATTCTTTGTGGA---TGCTGAGCAAGGATTGTATAAAGATATCTGGGCACGTGTCCTAGATGTGGCTTATGAGGCAAAAGATGTCATAGATTCAATTATTGTTCGAGATAATGGTCTCTTACATCTTATTTTCTCACTTCCCATTACCATAAAGAAGATCAAACTTATCAAAGAAGAGATCTCTGCTTTAGATGAGAGCATTCCCAAGGACAGAGGTCTAATCGCTGTGAACTCTCCCAAGAAACCAGTTGAGAGAAAGTCATTGACAACTAATAAAATAATTGTAGGTTTTGAGGAGGAGACGAACTTGATACTTAGAAAGCTCACCAGTGGACCGGCAGATCTAGATGTCATTTCGATCACTGGTATGCCGGGTTCAGGTAAAACTACTTTGGCATACAAAGTATACAATGATAAGTCAGTTTCTAGCCATTTCGACCTTCGTGCATGGTGCACGGTCGACCAAGGATGTGATGAGAAGAAGTTGTTGAATAAAATTTTCAATCAAGTTAGTGACTCAGATTCAAAATTGAGTGAGAATATTGATGTTCCTGATAAGCTACGGAAACAACTGTATGGAAAGAGGTATCTTATTGTCTTAGATGACGTGTGGGAGACTACTACATGGGATGAGGTGACAAGACCTTTTCCTGAAGCTAAGAAAGGAAGTAGAATTATTTTGACAACTCGAGAAAAGGAAGTAGCTTTGCATGGAAAGCTCTACACTGATCCTCTTGACCTTCGATTGCTAAGACCTGATGAAAGTTGGGAATTATTAGAGAAAAGGGCATTTGGGGACGAGAGTTGCCCTGATGAACTATTAGATGTCGGTAAAGAAATTGCCGAAAATTGTAAAGGGCTTCCTTTGGTGGCTGATCTGATTGCTGGAGTCATTGCTGGGAGGGAAAAGAAAAGGAGTGTGTGGCTTGAAGTTCAAAGTAGTTTGAGTTCTTTTATTTTGAACAGTGAAGTGGAAGTGATGAAAGTTATAGAATTAAGTTATGACCATTTACCACATCACCTCAAGCCATGCTTGCTGTATTTTGCAAGTTTTCCGAAGGACACTTCATTGACAATCTATGAGTTTAATGTTTATTTGGGTGCTGAAGGATTTGTGGGAAAGGCGGAGATGAACAGTATGGAAGAAGTGGTGAAGATTTATATGGATGATTTAATTTCCAGTAGCTTGGTAATTTGTTTCAATGAGATAGGTGATGCACTGAATTTCCAAATTCATGATCTTGTGCATGACTTTTGTTTGATAAAAGCAAGAAAGGAAAATTTGTTTGATCAGATAAGATCAAGTGCTCCAACAGATTTGTTGCCTCGTCAAATTACCATTGATTATGATGATGATGAGGAGCACTTTGGGCTTAATTTTGTCATTTTTGATTCAAATAAGAAAAGGCATTCTGGTAAACACATCTATTCTTTGAGGATTTTTGGAGACGAGCTGGATGACAGTCTTTTTGATACATTTCACCTAAGACACTTGAGGCTTCTTAGAGTGTTGGTCCTGGATACCTCTTTTATCATGGTGAACGATTCTTTGCTGAATGAAATATGCATGTTGAATCATTTGAGGTACTTAAGAATTGGGACACAAGTTAAATATCTGCCTTTGTCTTTCTCAAACCTCTGGAATCTAGAATTATTGTGGGTTGAAAACAAAGAATCAACCTTGATACTATTACCAAGAATTTGGGATCTTGTAAAGCTGCGAGTGCTGTTCGCGGATGCTTGTTCTTTCTTTGATATGGATGCAGATGAATCAATATTGATAGCAGAGGACACAAAGTTAGAGAAGTTGAGAATATTAGGGGAACTGTTGATTTCCTATTCGAAAGATACAAAGAATATTTTCAAAAGGTTTCCCAATCTTCAGATGCTTCAGTTTGAACTCAAGGAGTCATGGGATTATTCAACAGAGCAACATTGGTTCCCGAAATTGGATTGCCTAACTGAACTAGAAATACTCAATGTAGGTTTTAAAAGTTCAAACACAAACCACAGTGGGTCCTCTGTAAAGACAAATCGGCCGTGGGATTTTCACTTTCCTTCAAATTTGAAACAACTGTCATTGCATGACTTTCCTCTGACATCCGATTCACTATCAACAATAGCGAGACTGCCCAACCTTGAAGAGTTGTCCCTTTATGATGCAATCATCCAGGGAGAAGAATGGAACATGGGGGAGGAAGACACCTTTGAGAATCTCAAATTTTTGAACTTGCGTCTAGCGACTCTTTCCAAGTGGGAGGTTGGAGAGGAATCCTTCCCCAATCTTGAGAAGTTAAAACTGCAGGGATGTCGTAAGCTTGAGGAGATTCCACCTAGTTTTGGAGATATTTATTCATTGAAAGTTATCAAAATTGTAAAGAGTCCTCAACTTGAAGATTCTGCTCTCAAGATTAAGGAATACGCTGAAGATATGAGAGGAGGGAGCGAGCTTCAGATCCTTGGCCAGAAGAATATCCCCTTATTTAAGTAGCATTATGGTTGAACTTTGCTGGGTGATATTGTATATGATTAAAATATCCTGTTATGAGATTCCTCTTAGTTTCTTTTAACAAAAAATATAATTTTTATAAGTACAC</genome_strand>
        <mrna_strand>TCCAATAGCTTCAACATTATTTCTCAAACAAAGGGTTCTCTAGCTAAACTTCAGCCAGTGTAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTGAGAAAAAGTAGAATCATGGAAAAACGAAAAGATATTGAAGAAGCAAACAACTCATTG...........................................................................GTGTTATTTTCTGCTCTTAGCAAGGACATTGCCAATGTTCTAATTTTCCTAGAGAATGAGGAAAATCAAAAAGCTCTTGACAAAGATCAAGTTGAAAAGCTAAAATTGAAAATGGCATTTATTTGTACATATGTTCAGCTTTCTTATTCCGATTTTGAGCAGTTTGAAGATATAATGACTAGAAATAGACAAGAGGTTGAGAATCTGCTTCAATCACTTTTGGATGATGATGTCCTTACTAGCCTCACCAGTAATATGGATGACTGTATCAGCTTGTATCATCGTTCTTATAAATCAGATGCCATCATGATGGATGAGCAATTGGACTTCCTCCTCTTGAATCTGTATCATCTATCCAAGCATCACGCTGAAAAGATATTTCCTGGAGTGACTCAATATGAAGTTCTTCAGAATGTATGTGGCAACATAAGAGATTTCCATGGGTTGATACTGAATGGTTGCATTAAGCATGAGATGGTTGAGAATGTCTTACCTCTGTTTCAACTCATGGCTGAAAGAGTAGGACACTTCCTTTGGGAGGATCAGACTGATGAAGACTCTCGGCTCTCCGAGCTAGATGAGGATGAACACAATGATAGAGACTCTCGACTCTTCCAGCTAACACATCTACTCTTGAAGATTGTTCCAACTGAACTGGAGGTTATGCACATATGTTATACAAATTTGAAAGCTTCAACTTCAGCAGAAGTTGGACGCTTCATTAAGAAGCTCCTGGAAACCTCACCGGATATTCTCAGAGAATATATCATTCAACTACAAGAGCATATGTTAACTGTTATTCCCCCTAGCACTTTAGGGGCTCGAAACATTCATGTCATGATGGAATTCCTATTACTTATTCTTTCTGATATGCCCAAGGACTTTATTCATCATGACAAACTTTTTGATCTCTTGGCTCATGTTGGAACACTTACCAGGGAGGTATCGACTCTTGTACGTGACTTGGAAGAGAAATTAAGGAATAAAGAGGGTAATAACCAAACAAATTGTGCAACCCTAGACTTGCTGGAAAATATTGAACTCCTCAAGAAAGATCTCAAACATGTTTATCTGAAAGCCCCAAATTCATCTCAATGTTGCTTCCCCATGAGTGATGGACCACTCTTCATGCATCTTCTACACATGCACTTAAATGATTTGCTAGATTCTAATGCTTATTCAATTTCTTTGATAAAGGAAGAAATCGAGTTGGTGAGTCAAGAACTGGAATTCATAAGATCATTCTTTGGGGATGCTGCTGAGCAAGGATTGTATAAAGATATCTGGGCACGTGTTCTAGATGTGGCTTATGAGGCAAAAGATGTCATAGATTCAATTATTGTTCGAGATAATGGTCTCTTACATCTTATTTTCTCACTTCCCATTACCATAAAGAAGATCAAACTTATCAAAGAAGAGATCTCTGCTTTAGATGAGAACATTCCCAAGGACAGAGGTCTAATCGTTGTGAACTCTCCCAAGAAACCAGTTGAGAGAAAGTCATTGACAACTGATAAAATAATTGTAGGTTTTGAGGAGGAGACAAACTTGATACTTAGAAAGCTCACCAGTGGACCCGCAGATTTAGATGTCATTTCGATCACCGGTATGCCGGGTTCAGGTAAAACTACTTTGGCATACAAAGTATACAATGATAAGTCAGTTTCTAGACATTTTGACCTTCGTGCATGGTGCACGGTCGATCAAGGATATGACGACAAGAAGTTGTTGGATACAATTTTCAGTCAAGTTAGTGGCTCAGATTCAAATTTGAGTGAGAATATTGATGTTGCTGATAAATTGCGGAAACAACTGTTTGGAAAGAGGTATCTTATTGTCTTAGATGATGTGTGGGATACTACTACATTGGATGAGTTGACAAGACCTTTTCCTGAAGCTAAGAAAGGAAGTAGGATTATTTTGACAACTCGAGAAAAGGAAGTGGCTTTGCATGGAAAGCTGAACACTGATCCTCTTGACCTTCGATTGCTAAGACCAGATGAAAGTTGGGAACTTTTAGATAAAAGGACATTTGGTAATGAGAGTTGCCCTGATGAACTATTAGATGTCGGTAAAGAAATAGCCGAAAATTGTAAAGGGCTTCCTTTGGTGGCTGATCTGATTGCTGGAGTCATTGCTGGGAGGGAAAAGAAAAGGAGTGTGTGGCTTGAAGTTCAAAGTAGTTTGAGTTCTTTTATTTTGAACAGTGAAGTGGAAGTGATGAAAGTTATAGAATTAAGTTATGACCATTTACCACATCACCTCAAGCCATGCTTGCTTCACTTTGCAAGTTGGCCGAAGGACACTCCTTTGACAATCTATTTGTTTACTGTTTATTTGGGTGCTGAAGGATTTGTGGAAAAGACGGAGATGAAGGGTATAGAAGAAGTGGTGAAGATTTATATGGATGATTTAATTTCCAGTAGCTTGGTAATTTGTTTCAATGAGATAGGTGATATACTGAATTTCCAAATTCATGATCTTGTGCATGACTTTTGTTTGATAAAAGCAAGAAAGGAAAATTTGTTTGATCGGATAAGATCAAGTGCTCCATCAGATTTGTTGCCTCGTCAAATTACCATTGATTATGATGAGGAGGAGGAGCACTTTGGGCTTAATTTTGTCATGTTCGATTCAAATAAGAAAAGGCATTCTGGTAAACACCTCTATTCTTTGAGGATAAATGGAGACCAGCTGGATGACAGTGTTTCTGATGCATTTCACCTAAGACACTTGAGGCTTATTAGAGTGTTGGACCTGGAACCCTCTTTAATCATGGTGAATGATTCTTTGCTGAATGAAATATGCATGTTGAATCATTTGAGGTACTTAAGAATTCGGACACAAGTTAAATATCTGCCTTTCTCTTTCTCAAACCTCTGGAATCTAGAAAGTCTGTTTGTGTCTAACAAAGGATCAATCTTGGTACTATTACCGAGAATTTTGGATCTTGTAAAGTTGCGAGTGCTGTCCGTGGGTGCTTGTTCTTTCTTTGATATGGATGCAGATGAATCAATATTGATAGCAAAGGACACAAAGTTAGAGAACTTGAGAATATTAGGGGAACTGTTGATTTCCTATTCGAAAGATACAATGAATATTTTCAAAAGGTTTCCCAATCTTCAGGTGCTTCAGTTTGAACTCAAGGAGTCATGGGATTATTCAACAGAGCAACATTGGTTCCCGAAATTGGATTGCCTAACTGAACTAGAAACACTCTGTGTAGGTTTTAAAAGTTCAAACACAAACCACTGTGGGTCCTCTGTTGTGACAAATCGGCCGTGGGATTTTCACTTCCCTTCAAATTTGAAAGAACTGTTGTTGTATGACTTTCCTCTGACATCCGATTCACTATCAACAATAGCGAGACTGCCCAACCTTGAAAATTTGTCCCTTTATGATACAATCATCCAGGGAGAAGAATGGAACATGGGGGAGGAAGACACTTTTGAGAATCTCAAATTTTTGAACTTGCGTCTACTGACTCTTTCCAAGTGGGAGGTTGGAGAGGAATCCTTCCCCAATCTTGAGAAATTAAAACTGCAGGAATGTGGTAAGCTTGAGGAGATTCCACCTAGTTTTGGAGATATTTATTCATTGAAATTTATCAAAATTGTAAAGAGTCCTCAACTTGAAGATTCTGCTCTCAAGATTAAGAAATACGCTGAAGATATGAGAGGAGGGAACGATCTTCAGATCCTTGGCCAGAAGAATATCCCCTTATTTAAGTAGCATTTTGGTTGAACTTTGCTTGGTGATATTGTATATGATTAAAATATCCTGTGATGAGATTCCTCTTAGTTTCTTTTAACAAAAAATATAATTTTTATAAGTACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E747626" ref_strand="+" ref_description="SGN-E747626 [GI|3449377]">
      <seq>caataggttcatcattatttctcaaacaaaggcttctctagctaaacttcagcctctgtaaaggtcttgagaaaaagtagaatcatggaaaaacgaaaagataatgaagaagcaaacaactcattggtgctattttctgctcttagcaaggacattgccgatgttctggttttcctagagaatgaggaaaatcaaaaagctcttgacaaagatcaagttgaaaagataaaattgaaaatggcatttatttgtacatatgttcagctttcttgttccgattttgagcagtttgaagatataatgactagaaaaagacaagaggttgagaatctgcttcaaccacttttggatgatgatgtctttactagcctcaccagtaatatggatgactgtatcagcttgtatcatcgttcttataaatcagatgccatcatgatggatgagcaattggacttcctcctcttgaatctctatcatctatccaagcatcacgctgaaaagatatttcctggagtgactcaatatgaagttcttcagaatatatgtggcaacataagagatttccatgggttgatagtgaatggttgcattaagcatgagatggttgagaatgtcttncctctgtttcaactcatggctgacagagtaggacacttcctttgggatgatcagactgatgaagactctcgactctccgagctagatgaggatgaacaaaatgatagagactctcgacttttcaagctagcacatctactcttgaagatcgttccggttgaactggaggttatacacatatgttatacaaacttgaaagcttcaacttcagctgaagttggactcttcattaagcagcttctagaaacctctccagatattctgagggaatatctaattcctctgcaagagcacatggtaactgttattacccctagcacttcaggggctcgaaacattcatgtcatgatggaattcctattacttattctttctgatatgcccaaggactttattcatcatgacaaactttttgatctcttggatcgtgtcggagtacttaccagggaggtatcaactcttgtacgtgacttggaagaggaaccaaggaataaagagggtaataaccaaacaaattgtgcaaccctagacttgctggaaaatattgaactcctcaagaaagatctcaaacatgtttatctgaaagccctggattcatctcaatgttgcttccccatgagtgatggaccactcttcatgcatcttctacacatacacttaaatgatttgttagattctaatgcttattcaattgctttgataaaggaagaaatcgagctggtgaagcaagacctgaaattcataagatcattctttgtggatgctgagcaaggattgtataaagatctctgggcacgtgttctagatgtggcttatgaggcaaaagatgtcatagattcaattattgttcgagataatggtctcttacatcttattttctcacttcccattaccataaagaagatcaaacttatcaaagaagagatctctgctttagatgagaacattcccaaggacagaggtctaatcgttgtgaactctcccaagaaaccagttgagagaaagtcattgacaactgataaaataactgtaggttttgaggaggaaacaaacttgatacttagaaagctcaccagtggatcggcagatctagatgtcatttcgatcactggtatgccgggttcaggtaaaactactttggcatacaaagtatacaatgataagtcagtttctagccgtttcgaccttcgtgcatggtgcacggtcgaccaaggatgtgatgagaagaagttgttgaatacaattttcagtcaagttagtgactcagattcaaaattgagtgagaatattgatgttgctgataaattacggaaacaactgtttggaaagaggtatcttattgtcttagatgacgtgtgggatactactacatgggatgagttaacaagaccttttcctgaatctaagaaaggaagtaggattattttgacaactcgggaaaaggaagtggctttgcatggaaagctgaacactgatcctcttgaccttcgattgctaagaccagatgaaagttgggaactattagagaaaagggcatttgggaatgagagttgccctgatgaactattagatgtcggtaaagaaatagccgaaaattgtaaagggcttcctttggtggctgatctgattgctggagtcattgctgggagggaaaagaaaaggagtgtgtggcttgaagttcaaagtagtttgagttcttttattttgaacagtgaagtggaagtgatgaaagttatagaattaagttatgaccatttaccacatcacctcaagccatgcttgctgtattttgcaagttttccgaaggacacttcattgacaatctatgagttgaatgtttatttcggtgctgaaggatttgtgggaaagacggagatgaacagtatggaagaagtggtgaagatttatatggatgatttaatttacagtagcttggtaatttgtttcaatgagataggttatgcactgaatttccaaattcatgatcttgtgcatgacttttgtttgataaaagcaagaaaggaaaatttgtttgatcagataagatcaagtgctccatcagatttgttgcctcgtcaaattaccattgattgtgatgaggaggagcactttgggcttaattttgtcatgttcgattcaaataagaaaaggcattctggtaaacacctctattctttgaggataattggagaccagctggatgacagtgtttctgatgcatttcacctaagacacttgaggcttcttagagtgttggacctgcatacgtcttttatcatggtgaaagattctttgctgaatgaaatatgcatgttgaatcatttgaggtacttatccattgacacacaagttaaatatctgcctttgtctttctcaaacctctggaatctagaaagcctgtttgtgtctaccaacagatcaatcttggtactattaccgagaattttggatcttgtaaagttgcgagtgctgtccgtggatgcttgttctttctttgatatggatgcagatgaatcaatattgatagcagaggacacaaagttagagaacttgagaatattaacggaactgttgatttcctattcgaaagatacaaagaatattttcaaaaggtttcccaatcttcagttgctttcatttgaactcaaggagtcatgggattattcaacagagcaacattggttctcggaattggatttcctaactgaactagaaacactctctgtaggttttaaaagttcaaacacaaacgatagtgggtcctctgtagcgacaaatcggccgtgggattttcacttcccttcaaatttgaaaatactgtggttgcgtgaatttccgctgacatccgattcactatcaacaatagcgagactgcccaaccttgaagagttgtccctttatcatacaatcatccatggagaagaatggaacatgggggaggaagacacctttgagaatctcaaatttttgaacttcaatcaagttagtatttccaagtgggaggttggagaggaatccttccccaatcttgagaaattaaaactgcggggatgtcataagctagaggagattccacctagttttggagatatttattcattgaaatctatcaaaattgtaaagagtcctcaacttgaagattctgctctcaaaattaaggaatacgctgaagatatgaggggaggggacgagcttcagatccttggccaaaagaatatccccttatttaagtagcattatggttgaaaagtagattgtactttgctgggtagattgtatatgattaagaaaattttgttgcagttatgaaatatttttgtggatttctcaaagtttctgcaacaaaaattataatttttataaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0250I21.2" temp_strand="+" temp_description="C06HBa0250I21.2  AC209512.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0250I21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="108427" stop="114241"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108727" g_stop="108789" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="0.937"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108790" i_stop="110076" i_length="1287">
            <donor d_prob="0.974" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110077" g_stop="110139" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="126" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110140" i_stop="110214" i_length="75">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="110215" g_stop="113941" g_length="3727"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="3865" r_length="3739" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="3978" polyA_stop="3997"/>
      <MATCH_line gen_id="C06HBa0250I21.2" gen_strand="+" ref_id="SGN-E747626" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>3853</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0250I21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E747626" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108727" e_stop="108789"/>
          <exon e_start="110077" e_stop="110139"/>
          <exon e_start="110215" e_stop="113941"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATAGGTTCAGCATTATTTCTCAAACAAAGGGTTCTGTAGCTAAACTTCAGCCTGTGTAAAGGTACCATCTTCTTCTTTGCTAAACTTTATTCGCAGCAGAATAACATGAAAATGGTTAAGATCTAGCTTTTTGTTGTTCTCCTTTCAACAAAAACTACTCATTTGTATTTTAGTAATCTTGCACTTTTGGTATTTAAAGGACTTGTGAAGTCAATGAATTGTATTTTAGTAATCTTTGTTTGAATTCTAGATCTAGCTATTTGATTAGTCTCCTTTCAACCAAACTACTTCTTCGATCTCTTACTTCAACAAAAATATGTCAAAAAGGTGTGAACATGCTTAATCTATTGATTCTACTTCAGCTACTCTCAGAAAAAATCTTTTTCCATTAGCCCAAGTCGAGATAGGAGAAAAATAATATTATTAGAGAGATTATTAATCTAATGACATTTTACTTAATTTTAATCAAAATAAGGGAATAATATCCCGTTATTTAACTAGCTTTTAAGCATTATGGGTGGAAAGTAGAAAGAAGAAACATAGCAGAATAGACAGTAAGTTATGCTTTAATGAGTAGATCTGTATATGATTACATATTTGTTTGACTTTTCGGTGTTTCGATTAGAAAACTTACAAGTTTTTTAAAACATGTATCATTTGTTGATTTGTCCGTTTGGCACGTCATCACATATGAGTATGTCCATGAGACACACCGATGTCAAGTATAGATTTCTACTTGATCATACACAACTTTATCTGAGGTTGATGCCAAATCTAAAGCTGATATTTTAAACATTAATCTTATACACGAAAACATCATTCCTATTACTGTTTTCTTTACCTTTACCTTATAGACTTTTTGGCAGAAAAAAGTTAGACAGATACATTTGATGATGTTTACCATTCTCATTCTCTCTTTATTTTATTTTCTTTACATTCACACGCACAATAATTTTCTTGTAGGCTCCTTATATGCCATATACACATAGACGAATCTAGGATTTGATATTTACTAGTTTCTATGTCGACGTCATATTAATATCAATAATAATTAGATTGACAATCACATATTTATAATTATTAAGTCGATAACTTTCTTCTTTGTATAGGTTGGAAAAGTAATGGTAAACGAGCAGGACTCCTTTTTCTTTTTTTGTAAATAATTAACAGTTGTGAGATTTTATGTTTGTGACTTCATGTCATAAACATTTTTATGTGTGATTAAGATTGACATTTCCAATTGTGCGAGTCTAAAATTACTATATGTGAAAATAGTGATATTATTGATTATTCGTATCTTTTCATCTTCTTTCTCCTGTTAAAGTTTTAGCTACTTTTTATTCATCAGGTCTTGAGAAAAAGTAGAATCATGGAAAAACGAAAAGATAATGAAGAAGCAAACAACTCATTGGTATGTTATTTTATAGAGTAAACTGTAAAGTATTGAATTATAGATATGTGGCTTTAAAATGTATTATTTTGGCAGGTGTTATTTTCTGCTCTTAGCAAGGACATTGCCGATGTTCTGGTTTTCCTAGAGAATGAGGAAAATCAAAAATCTCTTGACAAAGATGAAGTTGAAAATCTAAAATTGAAAATGGCATTTATTTGTACATATGTTCAGCTTTCTTATTCCGATTTTGAGCAGTTTGAAGATATAATGACGAGAAAAAGACAACAGGTTGAGAATCTGCTTCAATCACTTTTGGATGATGATGTCCTTACTAGCCTCACCAGTAATATGGATGACTGTATCAGCTTGTATCATCGTTCTTATAAATCAGATGCCATCATGATGGATGAGCAATTGGACTTCCTCCTCTTGAATCTGTATCATCTATCCAAGCATCACGCTGAAAAGATATTTCCTGGAGTGACTCAATATGAAGTTCTTCAGAATGTATGTGGCAACCTAAGAGATTTCCATGGGTTGATAGTGAATGGTTGCATTAAGCATGAGATGGTTGAGAATGTCTTACCTCTGTTTCAACTGATGGCTGAAAGAGTAGGACACTTCCTTTGGGAGGATAAGACTGATG-A-A-----GA--CT-C--G---GATGAGGATGATCAGAATGATAGAGACTCTCGACTCTTCCAGCTAACACATCTACTCTTGAAGATTGTTCCAACTGAACTGGAGGTTATGCACATATGTTATACAAATTTGAAAGCTTCAACTTCAGCAGAAGTTGGACGCTTCATTAAGAAGCTCCTGGAAACCTCACCGGATATTCTCAGAGAATATATCATTCAACTACAAGAGCATATGATAACTGTTATTCGCCCTAGCACTTCAGGGGCTCGAAACATTCATGTCATGATGGAATTCCTATTACTTATTCTTTCTGATATGCCCAAGGACTTTATTCATCATGACAAACTTTTTGATCTCTTGGCTCATGTCGGAGTACTTACCAGGGAGGTATCAACTCTTGTACGTGACTTGGAAGAGAAATTAAGGAATAAAGAGGGTAATAACCAAACAAATTGTGCAACCCTAGACTTGCTGGAAAATATTGAACTCCTCAAGAAAGATCTCAAACATGTTTATCTGAAAGCCCCGGATTCATCTCAATGTTGCTTCCCCATGAGTGATGGACCACTCTTCATGCATCTTTTACACATGCACTTAAATGATTTGCTAGATTCTAATGCTTATTCAATTTCTTTGATAAAGGAAGAAATCGAGTTGGTGAAACAAGACCTGGAATTCATAAGATCATTCTTTGTGGATGCTGAGCAAGGATTGTATAAAGATATCTGGGCACGTGTCCTAGATGTGGCTTATGAGGCAAAAGATGTCATAGATTCAATTATTGTTCGAGATAATGGTCTCTTACATCTTATTTTCTCACTTCCCATTACCATAAAGAAGATCAAACTTATCAAAGAAGAGATCTCTGCTTTAGATGAGAGCATTCCCAAGGACAGAGGTCTAATCGCTGTGAACTCTCCCAAGAAACCAGTTGAGAGAAAGTCATTGACAACTAATAAAATAATTGTAGGTTTTGAGGAGGAGACGAACTTGATACTTAGAAAGCTCACCAGTGGACCGGCAGATCTAGATGTCATTTCGATCACTGGTATGCCGGGTTCAGGTAAAACTACTTTGGCATACAAAGTATACAATGATAAGTCAGTTTCTAGCCATTTCGACCTTCGTGCATGGTGCACGGTCGACCAAGGATGTGATGAGAAGAAGTTGTTGAATAAAATTTTCAATCAAGTTAGTGACTCAGATTCAAAATTGAGTGAGAATATTGATGTTCCTGATAAGCTACGGAAACAACTGTATGGAAAGAGGTATCTTATTGTCTTAGATGACGTGTGGGAGACTACTACATGGGATGAGGTGACAAGACCTTTTCCTGAAGCTAAGAAAGGAAGTAGAATTATTTTGACAACTCGAGAAAAGGAAGTAGCTTTGCATGGAAAGCTCTACACTGATCCTCTTGACCTTCGATTGCTAAGACCTGATGAAAGTTGGGAATTATTAGAGAAAAGGGCATTTGGGGACGAGAGTTGCCCTGATGAACTATTAGATGTCGGTAAAGAAATTGCCGAAAATTGTAAAGGGCTTCCTTTGGTGGCTGATCTGATTGCTGGAGTCATTGCTGGGAGGGAAAAGAAAAGGAGTGTGTGGCTTGAAGTTCAAAGTAGTTTGAGTTCTTTTATTTTGAACAGTGAAGTGGAAGTGATGAAAGTTATAGAATTAAGTTATGACCATTTACCACATCACCTCAAGCCATGCTTGCTGTATTTTGCAAGTTTTCCGAAGGACACTTCATTGACAATCTATGAGTTTAATGTTTATTTGGGTGCTGAAGGATTTGTGGGAAAGGCGGAGATGAACAGTATGGAAGAAGTGGTGAAGATTTATATGGATGATTTAATTTCCAGTAGCTTGGTAATTTGTTTCAATGAGATAGGTGATGCACTGAATTTCCAAATTCATGATCTTGTGCATGACTTTTGTTTGATAAAAGCAAGAAAGGAAAATTTGTTTGATCAGATAAGATCAAGTGCTCCAACAGATTTGTTGCCTCGTCAAATTACCATTGATTATGATGATGATGAGGAGCACTTTGGGCTTAATTTTGTCATTTTTGATTCAAATAAGAAAAGGCATTCTGGTAAACACATCTATTCTTTGAGGATTTTTGGAGACGAGCTGGATGACAGTCTTTTTGATACATTTCACCTAAGACACTTGAGGCTTCTTAGAGTGTTGGTCCTGGATACCTCTTTTATCATGGTGAACGATTCTTTGCTGAATGAAATATGCATGTTGAATCATTTGAGGTACTTAAGAATTGGGACACAAGTTAAATATCTGCCTTTGTCTTTCTCAAACCTCTGGAATCTAGAATTATTGTGGGTTGAAAACAAAGAATCAACCTTGATACTATTACCAAGAATTTGGGATCTTGTAAAGCTGCGAGTGCTGTTCGCGGATGCTTGTTCTTTCTTTGATATGGATGCAGATGAATCAATATTGATAGCAGAGGACACAAAGTTAGAGAAGTTGAGAATATTAGGGGAACTGTTGATTTCCTATTCGAAAGATACAAAGAATATTTTCAAAAGGTTTCCCAATCTTCAGATGCTTCAGTTTGAACTCAAGGAGTCATGGGATTATTCAACAGAGCAACATTGGTTCCCGAAATTGGATTGCCTAACTGAACTAGAAATACTCAATGTAGGTTTTAAAAGTTCAAACACAAACCACAGTGGGTCCTCTGTAAAGACAAATCGGCCGTGGGATTTTCACTTTCCTTCAAATTTGAAACAACTGTCATTGCATGACTTTCCTCTGACATCCGATTCACTATCAACAATAGCGAGACTGCCCAACCTTGAAGAGTTGTCCCTTTATGATGCAATCATCCAGGGAGAAGAATGGAACATGGGGGAGGAAGACACCTTTGAGAATCTCAAATTTTTGAACTTGCGTCTAGCGACTCTTTCCAAGTGGGAGGTTGGAGAGGAATCCTTCCCCAATCTTGAGAAGTTAAAACTGCAGGGATGTCGTAAGCTTGAGGAGATTCCACCTAGTTTTGGAGATATTTATTCATTGAAAGTTATCAAAATTGTAAAGAGTCCTCAACTTGAAGATTCTGCTCTCAAGATTAAGGAATACGCTGAAGATATGAGAGGAGGGAGCGAGCTTCAGATCCTTGGCCAGAAGAATATCCCCTTATTTAAGTAGCATTATGGTTGAA</genome_strand>
        <mrna_strand>CAATAGGTTCATCATTATTTCTCAAACAAAGGCTTCTCTAGCTAAACTTCAGCCTCTGTAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTGAGAAAAAGTAGAATCATGGAAAAACGAAAAGATAATGAAGAAGCAAACAACTCATTG...........................................................................GTGCTATTTTCTGCTCTTAGCAAGGACATTGCCGATGTTCTGGTTTTCCTAGAGAATGAGGAAAATCAAAAAGCTCTTGACAAAGATCAAGTTGAAAAGATAAAATTGAAAATGGCATTTATTTGTACATATGTTCAGCTTTCTTGTTCCGATTTTGAGCAGTTTGAAGATATAATGACTAGAAAAAGACAAGAGGTTGAGAATCTGCTTCAACCACTTTTGGATGATGATGTCTTTACTAGCCTCACCAGTAATATGGATGACTGTATCAGCTTGTATCATCGTTCTTATAAATCAGATGCCATCATGATGGATGAGCAATTGGACTTCCTCCTCTTGAATCTCTATCATCTATCCAAGCATCACGCTGAAAAGATATTTCCTGGAGTGACTCAATATGAAGTTCTTCAGAATATATGTGGCAACATAAGAGATTTCCATGGGTTGATAGTGAATGGTTGCATTAAGCATGAGATGGTTGAGAATGTCTTRCCTCTGTTTCAACTCATGGCTGACAGAGTAGGACACTTCCTTTGGGATGATCAGACTGATGAAGACTCTCGACTCTCCGAGCTAGATGAGGATGAACAAAATGATAGAGACTCTCGACTTTTCAAGCTAGCACATCTACTCTTGAAGATCGTTCCGGTTGAACTGGAGGTTATACACATATGTTATACAAACTTGAAAGCTTCAACTTCAGCTGAAGTTGGACTCTTCATTAAGCAGCTTCTAGAAACCTCTCCAGATATTCTGAGGGAATATCTAATTCCTCTGCAAGAGCACATGGTAACTGTTATTACCCCTAGCACTTCAGGGGCTCGAAACATTCATGTCATGATGGAATTCCTATTACTTATTCTTTCTGATATGCCCAAGGACTTTATTCATCATGACAAACTTTTTGATCTCTTGGATCGTGTCGGAGTACTTACCAGGGAGGTATCAACTCTTGTACGTGACTTGGAAGAGGAACCAAGGAATAAAGAGGGTAATAACCAAACAAATTGTGCAACCCTAGACTTGCTGGAAAATATTGAACTCCTCAAGAAAGATCTCAAACATGTTTATCTGAAAGCCCTGGATTCATCTCAATGTTGCTTCCCCATGAGTGATGGACCACTCTTCATGCATCTTCTACACATACACTTAAATGATTTGTTAGATTCTAATGCTTATTCAATTGCTTTGATAAAGGAAGAAATCGAGCTGGTGAAGCAAGACCTGAAATTCATAAGATCATTCTTTGTGGATGCTGAGCAAGGATTGTATAAAGATCTCTGGGCACGTGTTCTAGATGTGGCTTATGAGGCAAAAGATGTCATAGATTCAATTATTGTTCGAGATAATGGTCTCTTACATCTTATTTTCTCACTTCCCATTACCATAAAGAAGATCAAACTTATCAAAGAAGAGATCTCTGCTTTAGATGAGAACATTCCCAAGGACAGAGGTCTAATCGTTGTGAACTCTCCCAAGAAACCAGTTGAGAGAAAGTCATTGACAACTGATAAAATAACTGTAGGTTTTGAGGAGGAAACAAACTTGATACTTAGAAAGCTCACCAGTGGATCGGCAGATCTAGATGTCATTTCGATCACTGGTATGCCGGGTTCAGGTAAAACTACTTTGGCATACAAAGTATACAATGATAAGTCAGTTTCTAGCCGTTTCGACCTTCGTGCATGGTGCACGGTCGACCAAGGATGTGATGAGAAGAAGTTGTTGAATACAATTTTCAGTCAAGTTAGTGACTCAGATTCAAAATTGAGTGAGAATATTGATGTTGCTGATAAATTACGGAAACAACTGTTTGGAAAGAGGTATCTTATTGTCTTAGATGACGTGTGGGATACTACTACATGGGATGAGTTAACAAGACCTTTTCCTGAATCTAAGAAAGGAAGTAGGATTATTTTGACAACTCGGGAAAAGGAAGTGGCTTTGCATGGAAAGCTGAACACTGATCCTCTTGACCTTCGATTGCTAAGACCAGATGAAAGTTGGGAACTATTAGAGAAAAGGGCATTTGGGAATGAGAGTTGCCCTGATGAACTATTAGATGTCGGTAAAGAAATAGCCGAAAATTGTAAAGGGCTTCCTTTGGTGGCTGATCTGATTGCTGGAGTCATTGCTGGGAGGGAAAAGAAAAGGAGTGTGTGGCTTGAAGTTCAAAGTAGTTTGAGTTCTTTTATTTTGAACAGTGAAGTGGAAGTGATGAAAGTTATAGAATTAAGTTATGACCATTTACCACATCACCTCAAGCCATGCTTGCTGTATTTTGCAAGTTTTCCGAAGGACACTTCATTGACAATCTATGAGTTGAATGTTTATTTCGGTGCTGAAGGATTTGTGGGAAAGACGGAGATGAACAGTATGGAAGAAGTGGTGAAGATTTATATGGATGATTTAATTTACAGTAGCTTGGTAATTTGTTTCAATGAGATAGGTTATGCACTGAATTTCCAAATTCATGATCTTGTGCATGACTTTTGTTTGATAAAAGCAAGAAAGGAAAATTTGTTTGATCAGATAAGATCAAGTGCTCCATCAGATTTGTTGCCTCGTCAAATTACCATTGA-T-TG-TGATGAGGAGGAGCACTTTGGGCTTAATTTTGTCATGTTCGATTCAAATAAGAAAAGGCATTCTGGTAAACACCTCTATTCTTTGAGGATAATTGGAGACCAGCTGGATGACAGTGTTTCTGATGCATTTCACCTAAGACACTTGAGGCTTCTTAGAGTGTTGGACCTGCATACGTCTTTTATCATGGTGAAAGATTCTTTGCTGAATGAAATATGCATGTTGAATCATTTGAGGTACTTATCCATTGACACACAAGTTAAATATCTGCCTTTGTCTTTCTCAAACCTCTGGAATCTAGAAAGCCTGTTTGTGTCTACCAACAGATCAATCTTGGTACTATTACCGAGAATTTTGGATCTTGTAAAGTTGCGAGTGCTGTCCGTGGATGCTTGTTCTTTCTTTGATATGGATGCAGATGAATCAATATTGATAGCAGAGGACACAAAGTTAGAGAACTTGAGAATATTAACGGAACTGTTGATTTCCTATTCGAAAGATACAAAGAATATTTTCAAAAGGTTTCCCAATCTTCAGTTGCTTTCATTTGAACTCAAGGAGTCATGGGATTATTCAACAGAGCAACATTGGTTCTCGGAATTGGATTTCCTAACTGAACTAGAAACACTCTCTGTAGGTTTTAAAAGTTCAAACACAAACGATAGTGGGTCCTCTGTAGCGACAAATCGGCCGTGGGATTTTCACTTCCCTTCAAATTTGAAAATACTGTGGTTGCGTGAATTTCCGCTGACATCCGATTCACTATCAACAATAGCGAGACTGCCCAACCTTGAAGAGTTGTCCCTTTATCATACAATCATCCATGGAGAAGAATGGAACATGGGGGAGGAAGACACCTTTGAGAATCTCAAATTTTTGAACTTCAATCAAGTTAGTATTTCCAAGTGGGAGGTTGGAGAGGAATCCTTCCCCAATCTTGAGAAATTAAAACTGCGGGGATGTCATAAGCTAGAGGAGATTCCACCTAGTTTTGGAGATATTTATTCATTGAAATCTATCAAAATTGTAAAGAGTCCTCAACTTGAAGATTCTGCTCTCAAAATTAAGGAATACGCTGAAGATATGAGGGGAGGGGACGAGCTTCAGATCCTTGGCCAAAAGAATATCCCCTTATTTAAGTAGCATTATGGTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E301194" ref_strand="+" ref_description="SGN-E301194 [cLEW-22-P9]">
      <seq>ccttttagggcgtagcttagcactatatatagacgctatggcaaaccctattctgtaattctgtttttgcctctccataataaaattgctccctctcttcccgtggacgtagccaatttattggtgaaccacgtaaatctgttgtcttgtttttcgcgtttatatattttctcgtattatctcaaatttcgcacaacactcttaatattcataactatcatcttttcatattcataacctccaaatatttaaattaaactttaagaaatcttttggtattccttctattctatttgtataaattcaacttctttatctcatgaaacccctatcaagattattatttttattctatagtaaaaatagatgctgaaaactcttgaattttgataggatatgaaaggagtcgataaaaactcagagagttatgtactaatttttacttattttttcatctatatatacatcaatcttataagaataatgtctatattgtatttttttcttaaatattctgtttcttttagtcttttttttcactctgttagacttcttaatttagttttctatgaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0250I21-0rMr0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0250I21.2" temp_strand="+" temp_description="C06HBa0250I21.2  AC209512.1 htgs_phase:3 submitted_to_sgn_as:C06HBa0250I21 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="122541" stop="132290"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="122840" g_stop="123036" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="198" r_length="198" r_score="0.939"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="123037" i_stop="131613" i_length="8577">
            <donor d_prob="0.000" d_score="0.85"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="131614" g_stop="131996" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="575" r_length="377" r_score="0.896"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0250I21.2" gen_strand="+" ref_id="SGN-E301194" ref_strand="+">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>580</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0250I21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E301194" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="122840" e_stop="123036"/>
          <exon e_start="131614" e_stop="131996"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGTTAGGGCGTAGCTTAGCACTATATATAGACGCTATGGCAAACCCTATTCTGTAATTCTGTTTTTGCCTCTCCATAATAAAACTGCTCCCTCTCTTCCCCGTGGATGTAGCCAATTTATTGGTGAACCACGTAAATCTGTTGTCTTGTTTTTTGCG-TT-TATATTTTCACGTATTATCTCGAATTTCGCACAACAATAACATATGACTGCTCAACTCAGCTGTGAAATGAAAGAATACATTTGCACTCCTAAATCCTCAATTGGCAAACCCTGAAATAAAAATCTCAAACTCCTTACAAATATAGAAACTAAAAGGCCATAAGAAGAGCATCAATAAACATAGTCACAGCAGCACAATATCAATACAAAAACATTTTACACTTTCAAAGAGTGAGGAACCATCCATATAATAAATTCAAAGTGATAAAACGGAGAGATGACAAACCTCACATAGCAAGTAGAGTCAGGGGCACGAACAATATAAACACTCCATTGTTAATCCTTCAGAACATGACTCTTACAACACATCTCATCGCATTGTCCAAACCTGCACATACCTTCTCATTTTTTGTTCTACCTTAATTAAATAGAGAAACATTAGGATTTCAAGTTCAATAAAAGATGTTTACAAACCATGAATTACTTTAACAAATAAATGTCTCAGCGATATATTTTTCCTTCAATATTCTAAAGGGATGAAACTTTATGGATGTCTTGAAAATATGGAACAAAAATTAATTGTTTGTTCGCCAACTAATAATATTCCTAAAAACAACTCACAATAATATGAATTCAGTATTTTTGTGCCAAAAAGAGGAGCAACTATTATGCTTTTAATTATTCAAGAGCATGGATAATAACACTGATGCAAGGAACAAAAAAATTTGGGCTAGATTATTTATGCAAGGAACAAAAAAATTTGGGCTAGATTATTTATGCAAGGAACAAATAATGATGTTGCATTCTACAAAGGGGTCTTCATTTTTCTATTTTAGCATAGTAATCTCATTCCTATTGCAGAAGCCAACAAAAGCCATGACTTGCTTGGTTCATTTTTGAGTATTTCTAGCCTTTTCATTTCCCACATGTTGTAACTTTCTCCTACTAAGCTAAGCTGATAATATATAAATTTAACAGTATAAAATATAGAATTACCATTCAATTTCTAGAATAGGGACGACTGCTAAGCTTCTTTGAACTATTAGTCCACAAACTAAGCATAGCATAAAAAATGATAGCAATTAACACTTAACAATTAATATCCAAATAGCAAATAAAAAAATAGAAAAAAAAGTAAAGAGGAAAATAAAGGATGCAATTTTTTACAAAACCTGAAAATTAATATGGACAACTACACAAAAAATTATGTTAATTTAATCAAAAGGAAGAGCTAGTAAATAAACTTGTTTAATTATCACTATAAAGTTGGATGATGAGTCAACCTTCTTCACAAAGTAACTACATCAATAATACTATAGCCATAGTTATATGCAGCTGTAATGAATAATAAGTTATAACTACAACAACAACACAATTTTGGCTCACTGATAGACTTGACAAGTTCAAAAAATGCATTTTTCATGTATCAGCTCTCGTCATATACAATTACCTTCTCTTTGATCATACCATTGACACTCCACTTGATTAATAAAAAGAGTAATAAGAGCTATTTCGAGAAGATCTTCAGTTTTTCAATAAAGAAATTGCTAACTCCAATAGCTCTAAGTTATTGACAATATTTTTCACCAGAACAGGCCAATGAATCTTTTTTAAAAAAAACAAATGAGCCAATAGGAAAATACAAATGTAAGACAAGCAGAAGTTCAACAACTCATTGAAAACCCATTTTGTTGAGAATTTATTTTTAAGACACAATAATAGTAAGTAATATTGCCAATTAATAGAGCTTTTGGGAGCACTTATATAGGTGAGATCTAATATTTTTCAGGTATGCATATGAAGTCAAGTATCATAACCAATAGCATATGCAAATCATTGTACAATATTCACAACATACAGATCACATATAGTCGGGTCGAAACTTCGTTAAATGTCATTTATACATCATTAGAATCATAGTTAGTGCACCTACACAAATTCATACATCATAATACATGAATATCTTTAAGACATCGACAACATAGCAATTGTTTGAATGCATGTCATTCGAATCAACTATGACACATAAGCAAAAGAATAATTCCAAGTTTGATTAGATTAAAGCAACAACCCTTCATTTCAGACCAAATTGATGCTAGAACAGAAAATTTTCTCCATAATAACCAACACAAACAGTTGCTATAAATGAATAAACTTACTTGATTGGTCAACAAATCTATAGCAAATGGTGTTGAAACACGTGTGTTGTAGGATACTCAATGATTGCCTCTAATAAGAGCCTTTTCTATCTCTCTGACTCTCATATTAGCAGCACGGACAATTTGGCAATAGGAGTGGCCAGCTTCCCTGGCTAGATGCAGATTGACTTTCTCCCCATGACCAAACGAAGCACCCATAATAATCGGTTCTCTAATTCTCTCAGGTCCTTCAGTACACACAACTCAGATAATGAAGATGCACTTTAGCAAGAAAGCTCATAGACGTATCTAATGTAGGACAAAGAGCAAAATCGGAATAAAGGGCGTAAGAAACCATCAACGAACATACCCGTAGTTCAAATCTGGTATAAGTAGTTCCAGATCCTTGAATTTGCTAAGAAGACACATCGATAGTTCAAATTCTGGCATAAGTAGTTGCAGATCTTTAAATTTTCACACTGTAAATTAAAATAATTTCAAAAAGTTAATGCAATGATGTAAAAAGAACTCGAAGCGAAACCCACAACAGTATATGATTAAAATGAAGAAACCCAAAAAGTTAATTCCAATGGAAAACCAACATATACAAACAGAGGAAGTCCAAAAGAAGTATGATGGAAAAAACAACTGGAATTAAGGAACCCAAAAAGTTAATTTCGACAAAGAACCATCTATGAACAGATAAGATTCAAAAGAATTATGATGAAGACAGACTAAATTAATTGTTGCATGTAATAAACAAAGCAAAAATCAGTAATTAAACAGGAAAAACACAACCACATAACAAAAATTGAACATCAACACTAAAACCAACTGAAAAAGAAGAAAAAATCATCAATTTTGAGGAAAACAAAGAAGATCACAAAAAAACCAAAGAAATCATATGAAGAAGCTTACCTCAACAGAATGCTGGAGAAAGGAGAACTTTTGATGTATCGGTAGTCTGCAGTAACGTGTACATTGAAAGCACAACAACAGGACACGTAGCCAGAATGGAGTACTAAAAAGACTAAAATACCCTCAGACCTATGAAGCAGGCATGTTGAACATGCCTTTTCTAATATAAGAGTAATTTGTAGTAAGAAATTTATTGAATATATAAAAATTATTAATTTAGTACTCTGTAATTTTTAAATTTTAGAATTTTGCATCCACAAAATTTTAAGGTTTGACTTTATTTCAAACAACAAAGTTTAATATAGTAGAGAAGAATTTTGAATGTTATTATTCGAATACATTATGTTTGTAATTTGTGTAACTTTTGGACTATTTATTTACTTTATTTACTATTCTATAATCTTTTTATTTATTGCAAGGAAGTATCACCATTGAATAGTGATGGTCTTACTTTGTTTTGATAACAAAAGATATACAAGAAAATGTGGAGTGAAAAAGACGAGGAATACTACATTGTGTTTATATTGAGATTAATATAGTGAAAATAGAGTCGAGACAAAGAAAAATACTCTAAAATCTTCGACTATATTCACTATATAAAAGAGAATAATTATATGTTGAAGAAAAATATTTTTTTTTGTGAAGTTTTGGACTATTAAATTAATTCGAAGTTTCTTGAGTTATACCGACGTTATTGAATTGTTATATCCTGAAGAACAAGAATGTAGGCAGAGTGCGCTCACTCTCTTTCACCGTATTCTGTTTACTTCAAGAATTTTGAGCACTATAAATCTAATATCAAAGCAAGCAAAGGATATATAGTTTCATCATCAAGTAAAAAGGTTGCTACTCTCATCTCTATTGAAGTAAAATTATCGAAAAGTAAAAAATGATGCAAGGAAAATGAAATCTATAAACAGAAACAAAATGCAGGAGAAAGAGAGAGAATTAAATACGTACTAACACCATCGATTTACAACAAATCAATAGATGCACAACATTCAGGGCAGAGCTATAGCTTGACAAGGTTGGTTAGATGAACAACCTTCATCAAAAAAAATTTCCGAATATATACTAAATATCGATTTTTTTTAGATATATACTAATTGTTGAACAACCTTGACATAATAAAGGTTGTCAGCCCAGCAGTTAAGGCTGTGCAAGAATACCTCTAGCTTCAAGTTCGAGCCCAAGTGTGACAATTTTTTTATTCATTATTCTGTTTTTTCCTAAAGTATGAACACTCTTGGCAAAAATTCTGACTCCGTCACTGACAACATTATCACTTAATTATGATTAGTTAATGTTTATATTCACCTTATTAAATCATTACCTACCCATGATAAGTTGTATTAGTTTGGTATTAAACATCCGGTAAGTGTGAATTCTTACTAGGTGAGAAGCAGGGTGACTTCTTACATGATAAAGTTTGTGTGTACTTTTTATGCAGAACTTGAAAGGAAAATTACAATCATGGAAAAACGACAATAGCAAGCAACTCATTGGTATGTTAGTATTTGATAGAGAGTAAAGTATTGAATTGTAGATATCGTGTGGCCTTAAAAATTTGATATGTGTTATTCTCGCAGGTATTATTTTCTGCTCTTTGCAAGGACATTATCGATGTTCTGGATTTCCTAGAGAGATTGAAGAATGATAAAAATCAAAAAGTTGTTGATGTGGATCAAGTTGAAAAGCTGAAATGTTCTGATTTGGAGTAGTTTGAAGATGTAATGACTGCCAAAGGACGAGAGGTTGAGAATCTGATTCAATCAATTTTATATTATGTTGACAACAACGTTGCATGTAAATACGACATGCATCGTGTCCTTTGCTAGCCTCAGGGATAATATTGATTATAAGCTCACAACATCGTTCTAAATCAAGTTGTAGAACGATGTTTATCTCAAACATGTTTATCATTCATGGACCTCTCTTCATGCATCTTCTACAGAGACACTTAGATGATTTGTTGGATTCCAATGCTTATTCAATTGCTTTGATAAAGGAAGAAGTTGGGCTGGTGAAACAAGACCTCGAATGGATAAGAAATATTGAGCAAGAATGGTACAAGGATCTCTGGCCACGTGTTTTAGATGTGGCATATGAGGCAAAAGATGTCATTGATTCAATTATTGTTCGACAAACACAAATAGAACTTAACTTATGAGGTGAAGTTCAAACATAGTAGGTGACAAACACGATGAGAATTTCAAACTCAAACTTGTCTTCAAAATGAAGAAATCATAATGAAGTATTTTTCTTTTTAGGATCAAGATTCTGCTTACCAAAATCGCAACTGAAATAATCAGAGTTCTTTTTTAAGACAAAATTATCACTTATGTATAGGGATAGTATCCATTTTGTACCCTTCAAATATAATAGTTAGTCCCTTAAGTTTTGTCACTTTTGGTTTAAATAATAAAATAAGTACAATAATATGCTCAATTCCATTTTTCTTTAGAAATTACATAAATATGCCTCTTTATAGCTAATTAATTGATTTCATTGTTAAGTGGTAATAGAAATTGAAAGCAAATAACCTTACTGTATTGATGTGTATAAATTTTTTTTACAAATCATATCTTATTATGTTAGTAACCATATAATCATCTTATTTCACATGTTTCTATATTTATAGTTTTATATATGATTTTATGTTAATTAGAAATCACCTCAGTACTCAATACTCAATTAATAGAATATAAAAATTGGGTGTGTCATCCCAATTTGGGAGGATAAATTGGCAAAGACAATATGTCAGATTATTCACGTTTTAAAATTAATGATGTGGTCGAATAATAAATGGTCAGGTTTAAAAAATGATTTTGCATAATTGGAATTAAAAAATAGGTATAATACATAAATATACCATTTAACTTAGTCTTATTTTGTATTTATGTCCTTCAATTTTGAGTGTGCACAAAAAGACAGTTAAATTAGTGTAAAGCCGAACAAATAGACACACGAGTCCTACTTGTCATAATACATGCAAGACACTGTTAGGTTGTGGAGCTTGATTAATATATATAATTGTTTATGTGGTTTAACCTCCGCGGTGAGATTGCCAGGGGTTATGGAAATTTTAGGCTTTACTATTTATTCTCTGCAATAAAAAATATTCTGATTTATTAATATAAATATACCTCACCACCGTGGAAGTTTACTCACGGGGTGTTACCACGAAATATTGGATTTTATATTTCTCTCTCTAGATCTCTCATCTCTTTCTTTCGAAAGTTCTTGTGTTCTTCATTCATCAAGTGTGAGTGCGTGAATTCAATCCTAACAGACACCACATAGGACACAAATTTTCATGTAGGATGCCAGTAGGACGTTTGTGTCTGTTTGTTTAATTTTATACAAGTTTAAGTGTGTACTTGTGCACATTCAAAGTTGGAGGACATAAATGTGAAAGGAGATCAAGTTAAAGGGCATATTCATGTAATATGCCTAAAAAATAATAGCATGAATATGTCTTTTCTCAAACGACAATGACATAAATGAGTCAAGCTACATAAATAAACTTTTTCTCAAAATTCGATAATATATTTTTTAAAGAATTCATCGCCAACTTAATTATGTACTCAAGACAAGTCAAGAAAATCTAGAATATTCCGGAGTTATGGAGAATTGAGGAAGATCTCTAAATGTGTATTCTAGAGAGACTAGTATTCTAGATAGGGTAATTCTAGAATTAAGTAATTAAAGGAATATTCTATGATATAGCAGAAAAATATGTTTAGCTAGATTGTTCTATCACCTCCTGTGAATAGAGGTGGTCCATTTGAGTTGTAGGCAAGCTAGCAAGAACAAAGTAATAAAAGCAAGAGAGCAACCAAGAATGAATGCTCAAGTAAAGAGTGTTGCTGAAGAAAACAACAAGTGTTGTAAAGATTGTAAGACTGTATCGGGTTCTTACTTTGATATAATAAAATTCAAGTTGTGAGAAATCGATAGTGCCCCGTCGTCTCCACACCCAAAAATATTCAACATATTGAGCCTTTTTTTACCTTTTATTTTATCAAAATAGTCCAAAATTTGATCATACATAGCATGGAAAATAAGAAATTAATACTCTTTCATGAGCAGCGAGCAATGCAGTTCAGCAAGAAAAGGGTGATTTATTGGCATATAACATAAATGTACTTTTTAACTTGACCTCATTTTACGTTTATGTCCTCCAACTTTAATTTGAATATGAACAAGTAGAACTTAAACTTATATAAAATAGAACAAATAAACACACGAGTCCTACAGGACACCACGTAGGACAAAAAATTACATGTAGGATATCATATAGGACATGTGTGTTTATTTGATAAACTTTATACAAGTTTAAGTGTGTATTTGTGCATGCCCAAAGTTGAAGGTCATAAATGTTATTTGAAGTCAAGTTAATAGGACATATTTATGTATTTTGCCTTTTTTCTATAATCTATCCATGTCTTTGACGAATAGAGTTAAGCATGAAATTAGTCAAAGTGCATGCAAATTGAAAGTGAACGGTATCTTGTGAAATTGATTGAAATGTGTGCAAGTTAATCCAGTCAGCATGATTAACAAAAATCAAAAAGGAAAATTATGGAGCATAATTTAAGTGACAGCAGCATTATAACATGTTCTCTATTGTTATAAGTAACCATTTTTGCTGCTTAAAAATCAAGTCTTGTAGTGAAAACCGCTAATGTTAAAAGATGTGTTTGATAAAAGTCTCAACTGAATTTATTAAGTAGAAATGAGTAAAATTTCCTTTCACCTCATCAACCTTAAAGTTAATTACAGGAAAAATCTATCGTCATTGACTCATTGGGTTCGGGTGGATCCTAAAGTTATTATATATGTGACCATCTCATCTAAAAGCCAAATCATTCATGTCTCGACAATATACATTTGCCCCTGACGTTGGTAACTCAAAAAAAGATGATAGGTATAATTCAAAAGTCAATGAATTTTAGTATTATGAATGAACAAACCGTCAATATATATATCATATATTACTAAAAGCATGAACAAAAAAGTTGAAAGTTGAATTACGCTTTTACCTTTACTATAAATTAAATTGTTATAAAATATTTAATATTTGATTGTATAAATTTAATTAAATGTTAATGACTTTTGGACTTCCTAAGATTAATTACTAATTAAATATCTAATCTATTAATATTTATCATCTATAATCTATGTGTATATAATAATTATAATTTTTTTTAGAAAAAATCTTTACCTAAATTTCTTTTCTTTTCCTTTTCTTATAACTTTTTTCTTAACCCCTCTCATGAATAATATAATTGTGGATAAAGTATTATCCTTTATGATAAATAACTAAATTTAATAATTAAAGGGTGCAAATCTATAAAATGGAGATGCACTTTAATAATGTCCTCTTAATTATTATTAAAGAATGACTCTAGCTTCACAAATTTAAATTCATTAATGCTTAATTACATGATAAGAACTTTAGTTGTTCTTTTTACATGGTTTGCTAACTTTAATTTTTTTTCATATTCTTTCATTTATTTATTATTATTTTCTAATTATTTATTTAACTTTTATACTCTTAATATTCATAACTCTCATCTTTTCATATTCATAACTTCCAAATATTTAAACTAAAACTTTAAGATATCTTTTGATATTCCTTCTATTCTGTTTATATAAATTCAACTTCTTTATCTCATGAAACCCTACCAAGATTATTAGGATATTATTTTTATTCTATAGTAAAAACAGATGATGAAGATTCTTGAATTTTGATAGGATATGAAAGGAATCAATAAAAACTCAGAGAGTTATGTACTAATTTTGTACTTATTTTTTCATCTATATATACATCAATCTTATAAGAATAATGTCGATATTTTA-TTTTTTCTTAAATATTCTGTTTCTTTTTATC-TTTTTTT-ACTCTGTTAGACTTCTTAATTTAGTTTTCTAAAAGAG</genome_strand>
        <mrna_strand>CCTTTTAGGGCGTAGCTTAGCACTATATATAGACGCTATGGCAAACCCTATTCTGTAATTCTGTTTTTGCCTCTCCATAATAAAATTGCTCCCTCTCTT-CCCGTGGACGTAGCCAATTTATTGGTGAACCACGTAAATCTGTTGTCTTGTTTTTCGCGTTTATATATTTTCTCGTATTATCTCAAATTTCGCACAACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTAATATTCATAACTATCATCTTTTCATATTCATAACCTCCAAATATTTAAA-TTAAACTTTAAGAAATCTTTTGGTATTCCTTCTATTCTATTTGTATAAATTCAACTTCTTTATCTCATGAAA-CC--CC--TATCA--AGATTATTATTTTTATTCTATAGTAAAAATAGATGCTGAAAACTCTTGAATTTTGATAGGATATGAAAGGAGTCGATAAAAACTCAGAGAGTTATGTACTAATTTT-TACTTATTTTTTCATCTATATATACATCAATCTTATAAGAATAATGTCTATATTGTATTTTTTTCTTAAATATTCTGTTTCTTTTAGTCTTTTTTTTCACTCTGTTAGACTTCTTAATTTAGTTTTCTATGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>20</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="6284" PGL_stop="4876"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="6284" e_stop="6186"/>
            <exon e_start="5420" e_stop="4876"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.971" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="6284" e_stop="6186" e_length="99"/>
          </exon>
          <intron i_serial="1" don_prob="0.971" acc_prob="0.996">
            <gDNA_intron_boundary i_start="6185" i_stop="5421" i_length="765"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="5420" e_stop="4876" e_length="545"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6284" stop="6186"/>
              <exon start="5420" stop="4898"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545662" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6283" stop="6186"/>
              <exon start="5420" stop="4880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5336" stop="4876"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545661" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATGATAACGAAAGATTTTTGAGGAATGCTTATGGTCTTGAATATCCAGAACCTAATGTCACATTTTCACTATGTCGAGGAAGTTGGTCTTCACCAGCG : CTAAGGATCTATAGACCAGATGAAGTCGCGAACGAGCTTGAGAGAGCGAAAATGGAGTATTTGGAAGCTTCGGTAGGAGTAACAAGTAAGAAGAAGATAATGGTGCCCAAGCTAATGCAATGGCACATGAAAGACTTTGCGGATGATATGGAGTCTCTAATAGAATGGATGTATAGTCAATTACCAAGCTCGTGCTCTTTGAAAAAGTCGATGATGGATTGTCTTGATGCGGGGGAAAAGAAATATTTATCGCTAGCTAAGATGATAGAGGTTCAACCTTATGCTTCAGAATTTCGATACTTACTCCCACTATGAACATAACAATTGTTTGCGCGTAGTTGATTGAACTTTAATAATCTTATTATTTTATTTGTTTGTTTTTAAAGGTCTGAATTGTAATCATTCGGACCTAAAATCCTCAAAAAGGAAAATAGAGGTGTTACTTTAGATGGCTCAAAATTTCGATACTTGTTCCCCCTTACGAGTTATTTATTTGTTTGCCAATTAATTAATAGTTGTTAAATATAATAATTATTAAGACCACA</gDNA_template>
            <first_frame> D  D  N  E  R  F  L  R  N  A  Y  G  L  E  Y  P  E  P  N  V  T  F  S  L  C  R  G  S  W  S  S  P  A  :  L  R  I  Y  R  P  D  E  V  A  N  E  L  E  R  A  K  M  E  Y  L  E  A  S  V  G  V  T  S  K  K  K  I  M  V  P  K  L  M  Q  W  H  M  K  D  F  A  D  D  M  E  S  L  I  E  W  M  Y  S  Q  L  P  S  S  C  S  L  K  K  S  M  M  D  C  L  D  A  G  E  K  K  Y  L  S  L  A  K  M  I  E  V  Q  P  Y  A  S  E  F  R  Y  L  L  P  L  *  T  *  Q  L  F  A  R  S  *  L  N  F  N  N  L  I  I  L  F  V  C  F  *  R  S  E  L  *  S  F  G  P  K  I  L  K  K  E  N  R  G  V  T  L  D  G  S  K  F  R  Y  L  F  P  L  T  S  Y  L  F  V  C  Q  L  I  N  S  C  *  I  *  *  L  L  R  P   </first_frame>
            <second_frame>  M  I  T  K  D  F  *  G  M  L  M  V  L  N  I  Q  N  L  M  S  H  F  H  Y  V  E  E  V  G  L  H  Q  R :   *  G  S  I  D  Q  M  K  S  R  T  S  L  R  E  R  K  W  S  I  W  K  L  R  *  E  *  Q  V  R  R  R  *  W  C  P  S  *  C  N  G  T  *  K  T  L  R  M  I  W  S  L  *  *  N  G  C  I  V  N  Y  Q  A  R  A  L  *  K  S  R  *  W  I  V  L  M  R  G  K  R  N  I  Y  R  *  L  R  *  *  R  F  N  L  M  L  Q  N  F  D  T  Y  S  H  Y  E  H  N  N  C  L  R  V  V  D  *  T  L  I  I  L  L  F  Y  L  F  V  F  K  G  L  N  C  N  H  S  D  L  K  S  S  K  R  K  I  E  V  L  L  *  M  A  Q  N  F  D  T  C  S  P  L  R  V  I  Y  L  F  A  N  *  L  I  V  V  K  Y  N  N  Y  *  D  H  </second_frame>
            <third_frame>   *  *  R  K  I  F  E  E  C  L  W  S  *  I  S  R  T  *  C  H  I  F  T  M  S  R  K  L  V  F  T  S   : A  K  D  L  *  T  R  *  S  R  E  R  A  *  E  S  E  N  G  V  F  G  S  F  G  R  S  N  K  *  E  E  D  N  G  A  Q  A  N  A  M  A  H  E  R  L  C  G  *  Y  G  V  S  N  R  M  D  V  *  S  I  T  K  L  V  L  F  E  K  V  D  D  G  L  S  *  C  G  G  K  E  I  F  I  A  S  *  D  D  R  G  S  T  L  C  F  R  I  S  I  L  T  P  T  M  N  I  T  I  V  C  A  *  L  I  E  L  *  *  S  Y  Y  F  I  C  L  F  L  K  V  *  I  V  I  I  R  T  *  N  P  Q  K  G  K  *  R  C  Y  F  R  W  L  K  I  S  I  L  V  P  P  Y  E  L  F  I  C  L  P  I  N  *  *  L  L  N  I  I  I  I  K  T  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0250I21.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6284" stop="6186"/>
                    <exon start="5420" stop="5106"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>411</number_coding_nucleotides>
                  <number_encoded_amino_acids>137</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DDNERFLRNAYGLEYPEPNVTFSLCRGSWSSPALRIYRPDEVANELERAKMEYLEASVGVTSKKKIMVPKLMQWHMKDFADDMESLIEWMYSQLPSSCSLKKSMMDCLDAGEKKYLSLAKMIEVQPYASEFRYLLPL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="25948" PGL_stop="25542"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="25948" e_stop="25542"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.971"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.971">
            <gDNA_exon_boundary e_start="25948" e_stop="25542" e_length="407"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25948" stop="25542"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311743" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACAAGAAATCTTCAACATAAAGAAGATCAAGATTTTATGGGAAAAGATAATCTCTTGTTACCATCTTTGCAATGGCGTCCTGTTCGTTCTCCCAAATCTAATCCCGGTACCAATGTTCCTACAAACATAGCAAGTCAGGTTTCAGAAAGGAACTTTGTTGGTCGTAAAGAATTAATTGCACATCCTCCTTCACTTTCTAACTCCTTTCAGTAACGAGTATTCACGTCAAAAATAAAAAATATTAGGTGATTTATTTTTACACGTCAAAAGTATTTATAGATAATTATTTGATATGTATTGCTAATGAGATATTTGAACTTACACAAATGGTTACGGACATATTATTAAGAGAATAAATATACATACCAAGACTCTTGATATAACGTTGTAATATTTGGACAATATT</gDNA_template>
            <first_frame> N  K  K  S  S  T  *  R  R  S  R  F  Y  G  K  R  *  S  L  V  T  I  F  A  M  A  S  C  S  F  S  Q  I  *  S  R  Y  Q  C  S  Y  K  H  S  K  S  G  F  R  K  E  L  C  W  S  *  R  I  N  C  T  S  S  F  T  F  *  L  L  S  V  T  S  I  H  V  K  N  K  K  Y  *  V  I  Y  F  Y  T  S  K  V  F  I  D  N  Y  L  I  C  I  A  N  E  I  F  E  L  T  Q  M  V  T  D  I  L  L  R  E  *  I  Y  I  P  R  L  L  I  *  R  C  N  I  W  T  I   </first_frame>
            <second_frame>  T  R  N  L  Q  H  K  E  D  Q  D  F  M  G  K  D  N  L  L  L  P  S  L  Q  W  R  P  V  R  S  P  K  S  N  P  G  T  N  V  P  T  N  I  A  S  Q  V  S  E  R  N  F  V  G  R  K  E  L  I  A  H  P  P  S  L  S  N  S  F  Q  *  R  V  F  T  S  K  I  K  N  I  R  *  F  I  F  T  R  Q  K  Y  L  *  I  I  I  *  Y  V  L  L  M  R  Y  L  N  L  H  K  W  L  R  T  Y  Y  *  E  N  K  Y  T  Y  Q  D  S  *  Y  N  V  V  I  F  G  Q  Y  </second_frame>
            <third_frame>   Q  E  I  F  N  I  K  K  I  K  I  L  W  E  K  I  I  S  C  Y  H  L  C  N  G  V  L  F  V  L  P  N  L  I  P  V  P  M  F  L  Q  T  *  Q  V  R  F  Q  K  G  T  L  L  V  V  K  N  *  L  H  I  L  L  H  F  L  T  P  F  S  N  E  Y  S  R  Q  K  *  K  I  L  G  D  L  F  L  H  V  K  S  I  Y  R  *  L  F  D  M  Y  C  *  *  D  I  *  T  Y  T  N  G  Y  G  H  I  I  K  R  I  N  I  H  T  K  T  L  D  I  T  L  *  Y  L  D  N  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0250I21.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25947" stop="25735"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TRNLQHKEDQDFMGKDNLLLPSLQWRPVRSPKSNPGTNVPTNIASQVSERNFVGRKELIAHPPSLSNSFQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="50508" PGL_stop="52423"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="50508" e_stop="50625"/>
            <exon e_start="51623" e_stop="51737"/>
            <exon e_start="51813" e_stop="51842"/>
            <exon e_start="51924" e_stop="52175"/>
            <exon e_start="52274" e_stop="52423"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.920" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.576" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.824" e_score="1.000"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="50508" e_stop="50625" e_length="118"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.920">
            <gDNA_intron_boundary i_start="50626" i_stop="51622" i_length="997"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="51623" e_stop="51737" e_length="115"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.996">
            <gDNA_intron_boundary i_start="51738" i_stop="51812" i_length="75"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="51813" e_stop="51842" e_length="30"/>
          </exon>
          <intron i_serial="3" don_prob="0.576" acc_prob="0.988">
            <gDNA_intron_boundary i_start="51843" i_stop="51923" i_length="81"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="51924" e_stop="52175" e_length="252"/>
          </exon>
          <intron i_serial="4" don_prob="0.985" acc_prob="0.824">
            <gDNA_intron_boundary i_start="52176" i_stop="52273" i_length="98"/>
          </intron>
          <exon e_serial="5" e_score="0.987">
            <gDNA_exon_boundary e_start="52274" e_stop="52423" e_length="150"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50508" stop="50625"/>
              <exon start="51623" stop="51737"/>
              <exon start="51813" stop="51842"/>
              <exon start="51924" stop="52175"/>
              <exon start="52274" stop="52423"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212216" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACGTGCTGATGAGATAGAAAAGAAACGTGCTGACTCGCAAGAATCAAGTGAAGAAAAGCACAAGAAGTTGGAAGAAACTGAAAAAAAAGTTCAACAATATCAGGAATCAATGAGCAG : GCTCGAAGAAAAGCTCACCAACATAGAGTCGGAAAATAAAGTACTTCGCCAGCAGGCTCTGACAATGGCACAGAACAATAAATTGCTGTCGGGACGGTCAAGATCAAGTATTCAG : AGGACTGAGAGCAGCACAAGGAATAGCGTA : GATCTGCATAGCACTTCATTTTCAAGGGAGAGTGCTGAGGTGGAGGGAAGACCACAGAAATCACTTAATGATAAACAACAGGAGTATCAGGACTTGATCATCCGGTGTATTGCACAGCACCTTGGCTTCTCTAAAGGCCGACCTGTTGCTGCCTGCATTATCTACAAGTGCCTTAGGCAGTGGCGATCATTTGAAGTAGAGCGAACCAGTATCTTTGACAGGGTAATACAAACCATTGGCCAAGCTATTGAG : ACTCAGGACAACAATGATATGTTAGCCTATTGGCTATCCAATGCATCCACTCTATTGCTGCTGCTGCAACGTACATTAAAAGCTGGTGGTGCTGCTGGGATGACCCCACAGCACAGGCGATCATCGTCAGCCACTCTATTTGGGAGAATG</gDNA_template>
            <first_frame> N  V  L  M  R  *  K  R  N  V  L  T  R  K  N  Q  V  K  K  S  T  R  S  W  K  K  L  K  K  K  F  N  N  I  R  N  Q  *  A   : G  S  K  K  S  S  P  T  *  S  R  K  I  K  Y  F  A  S  R  L  *  Q  W  H  R  T  I  N  C  C  R  D  G  Q  D  Q  V  F  R :   G  L  R  A  A  Q  G  I  A  * :   I  C  I  A  L  H  F  Q  G  R  V  L  R  W  R  E  D  H  R  N  H  L  M  I  N  N  R  S  I  R  T  *  S  S  G  V  L  H  S  T  L  A  S  L  K  A  D  L  L  L  P  A  L  S  T  S  A  L  G  S  G  D  H  L  K  *  S  E  P  V  S  L  T  G  *  Y  K  P  L  A  K  L  L  R :   L  R  T  T  M  I  C  *  P  I  G  Y  P  M  H  P  L  Y  C  C  C  C  N  V  H  *  K  L  V  V  L  L  G  *  P  H  S  T  G  D  H  R  Q  P  L  Y  L  G  E   </first_frame>
            <second_frame>  T  C  *  *  D  R  K  E  T  C  *  L  A  R  I  K  *  R  K  A  Q  E  V  G  R  N  *  K  K  S  S  T  I  S  G  I  N  E  Q  :  A  R  R  K  A  H  Q  H  R  V  G  K  *  S  T  S  P  A  G  S  D  N  G  T  E  Q  *  I  A  V  G  T  V  K  I  K  Y  S   : E  D  *  E  Q  H  K  E  *  R   : R  S  A  *  H  F  I  F  K  G  E  C  *  G  G  G  K  T  T  E  I  T  *  *  *  T  T  G  V  S  G  L  D  H  P  V  Y  C  T  A  P  W  L  L  *  R  P  T  C  C  C  L  H  Y  L  Q  V  P  *  A  V  A  I  I  *  S  R  A  N  Q  Y  L  *  Q  G  N  T  N  H  W  P  S  Y  *   : D  S  G  Q  Q  *  Y  V  S  L  L  A  I  Q  C  I  H  S  I  A  A  A  A  T  Y  I  K  S  W  W  C  C  W  D  D  P  T  A  Q  A  I  I  V  S  H  S  I  W  E  N  </second_frame>
            <third_frame>   R  A  D  E  I  E  K  K  R  A  D  S  Q  E  S  S  E  E  K  H  K  K  L  E  E  T  E  K  K  V  Q  Q  Y  Q  E  S  M  S  R :   L  E  E  K  L  T  N  I  E  S  E  N  K  V  L  R  Q  Q  A  L  T  M  A  Q  N  N  K  L  L  S  G  R  S  R  S  S  I  Q  :  R  T  E  S  S  T  R  N  S  V  :  D  L  H  S  T  S  F  S  R  E  S  A  E  V  E  G  R  P  Q  K  S  L  N  D  K  Q  Q  E  Y  Q  D  L  I  I  R  C  I  A  Q  H  L  G  F  S  K  G  R  P  V  A  A  C  I  I  Y  K  C  L  R  Q  W  R  S  F  E  V  E  R  T  S  I  F  D  R  V  I  Q  T  I  G  Q  A  I  E  :  T  Q  D  N  N  D  M  L  A  Y  W  L  S  N  A  S  T  L  L  L  L  L  Q  R  T  L  K  A  G  G  A  A  G  M  T  P  Q  H  R  R  S  S  S  A  T  L  F  G  R  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0250I21.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50510" stop="50625"/>
                    <exon start="51623" stop="51737"/>
                    <exon start="51813" stop="51842"/>
                    <exon start="51924" stop="52175"/>
                    <exon start="52274" stop="52423"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>663</number_coding_nucleotides>
                  <number_encoded_amino_acids>221</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RADEIEKKRADSQESSEEKHKKLEETEKKVQQYQESMSRLEEKLTNIESENKVLRQQALTMAQNNKLLSGRSRSSIQRTESSTRNSVDLHSTSFSRESAEVEGRPQKSLNDKQQEYQDLIIRCIAQHLGFSKGRPVAACIIYKCLRQWRSFEVERTSIFDRVIQTIGQAIETQDNNDMLAYWLSNASTLLLLLQRTLKAGGAAGMTPQHRRSSSATLFGRM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="58818" PGL_stop="58416"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="58818" e_stop="58416"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.965"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.965">
            <gDNA_exon_boundary e_start="58818" e_stop="58416" e_length="403"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58818" stop="58416"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229053" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCCTCGTTTGTGGTTCTTTTTCTGGTGGTGTACTATCTCACTAGATAATATGCAATGGTCTTATATTTAGTTGTTCAAGACTCTCCAAAAATGCTACCACAAACCATGTCGGATCTGCTAAAAGTGCACCACTTTTGCAGGATTCGACATACATTTTTGAAGAGTCCGAGCAACATAAGTTTTATGTGCAAAGTTGCTGAGATTCTGATATTGGCATTACTATCTCACTGTAAGAATGTTCAGACGTGTGTATCTGTGTCGAGATGTTTAAATACAATTTGAAGATGTGGATCTGTACAATGCAACTTTTGTTACATAAAAAGTCAGTGGAAAGATTCAAAAAGTGAAAAGTTTGAATCACCATTTTACCTCTCTTCAATTAAAATTTTATCAAATATAAATA</gDNA_template>
            <first_frame> A  S  F  V  V  L  F  L  V  V  Y  Y  L  T  R  *  Y  A  M  V  L  Y  L  V  V  Q  D  S  P  K  M  L  P  Q  T  M  S  D  L  L  K  V  H  H  F  C  R  I  R  H  T  F  L  K  S  P  S  N  I  S  F  M  C  K  V  A  E  I  L  I  L  A  L  L  S  H  C  K  N  V  Q  T  C  V  S  V  S  R  C  L  N  T  I  *  R  C  G  S  V  Q  C  N  F  C  Y  I  K  S  Q  W  K  D  S  K  S  E  K  F  E  S  P  F  Y  L  S  S  I  K  I  L  S  N  I  N  </first_frame>
            <second_frame>  P  R  L  W  F  F  F  W  W  C  T  I  S  L  D  N  M  Q  W  S  Y  I  *  L  F  K  T  L  Q  K  C  Y  H  K  P  C  R  I  C  *  K  C  T  T  F  A  G  F  D  I  H  F  *  R  V  R  A  T  *  V  L  C  A  K  L  L  R  F  *  Y  W  H  Y  Y  L  T  V  R  M  F  R  R  V  Y  L  C  R  D  V  *  I  Q  F  E  D  V  D  L  Y  N  A  T  F  V  T  *  K  V  S  G  K  I  Q  K  V  K  S  L  N  H  H  F  T  S  L  Q  L  K  F  Y  Q  I  *  I </second_frame>
            <third_frame>   L  V  C  G  S  F  S  G  G  V  L  S  H  *  I  I  C  N  G  L  I  F  S  C  S  R  L  S  K  N  A  T  T  N  H  V  G  S  A  K  S  A  P  L  L  Q  D  S  T  Y  I  F  E  E  S  E  Q  H  K  F  Y  V  Q  S  C  *  D  S  D  I  G  I  T  I  S  L  *  E  C  S  D  V  C  I  C  V  E  M  F  K  Y  N  L  K  M  W  I  C  T  M  Q  L  L  L  H  K  K  S  V  E  R  F  K  K  *  K  V  *  I  T  I  L  P  L  F  N  *  N  F  I  K  Y  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0250I21.2" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58770" stop="58537"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YAMVLYLVVQDSPKMLPQTMSDLLKVHHFCRIRHTFLKSPSNISFMCKVAEILILALLSHCKNVQTCVSVSRCLNTI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="60793" PGL_stop="60166"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="60793" e_stop="60166"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="60793" e_stop="60166" e_length="628"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60793" stop="60166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337008" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGAGTTGAGTCCCCATTTGATTCAGGTTCTTGTAGGCAGAGCTAACTGTGAAGACACCTTTTGCTATGATGAATCCACCTAAGAGTGTCTTCTCCCTCTTTCAATCCTCGAAAATGGTCCAGGGTGCCATAATTCAGCTAGTCTATCCACCTCCAATCATGAGTTTTGACTTCATTTACTAGGGAAATTATGTCACTCTTTGCAACCTTATTTTCTTTTTGATATTTTTTCCCTGTTTAGATGAAGTAGGTGTAGTGATCCCCTTTAATTTTTACTCTCTCAGATTATTGTCCGACCATATTAAACTTGCTAGTTTATCGAGGTGGAAAAGAGTCTTAGAAGGTGTCATTAATATAAGAATGGGTTGGTTTAGCTTATATACTTATGCTTCTTTTGGTGCTAACTATCATTTGTTCAACCTCAATTTCCAAAATATCTATGTTCTAAAGCCTCTTAAATGTATGCACATTTTTTCGTTCTCTAGTATCATAAGTGAATTCATGTTTGTGTGTCTGCTTGTTGTTCCCTTACGCTTTCCTCTTTTTAAATGGTATGAGACGTAAATATAAAGCTTCAGGCTTGATCCAATTTTAGTACCGTACCTTGACATTACCATAAACTAGCCCCT</gDNA_template>
            <first_frame> *  V  E  S  P  F  D  S  G  S  C  R  Q  S  *  L  *  R  H  L  L  L  *  *  I  H  L  R  V  S  S  P  S  F  N  P  R  K  W  S  R  V  P  *  F  S  *  S  I  H  L  Q  S  *  V  L  T  S  F  T  R  E  I  M  S  L  F  A  T  L  F  S  F  *  Y  F  F  P  V  *  M  K  *  V  *  *  S  P  L  I  F  T  L  S  D  Y  C  P  T  I  L  N  L  L  V  Y  R  G  G  K  E  S  *  K  V  S  L  I  *  E  W  V  G  L  A  Y  I  L  M  L  L  L  V  L  T  I  I  C  S  T  S  I  S  K  I  S  M  F  *  S  L  L  N  V  C  T  F  F  R  S  L  V  S  *  V  N  S  C  L  C  V  C  L  L  F  P  Y  A  F  L  F  L  N  G  M  R  R  K  Y  K  A  S  G  L  I  Q  F  *  Y  R  T  L  T  L  P  *  T  S  P  </first_frame>
            <second_frame>  E  L  S  P  H  L  I  Q  V  L  V  G  R  A  N  C  E  D  T  F  C  Y  D  E  S  T  *  E  C  L  L  P  L  S  I  L  E  N  G  P  G  C  H  N  S  A  S  L  S  T  S  N  H  E  F  *  L  H  L  L  G  K  L  C  H  S  L  Q  P  Y  F  L  F  D  I  F  S  L  F  R  *  S  R  C  S  D  P  L  *  F  L  L  S  Q  I  I  V  R  P  Y  *  T  C  *  F  I  E  V  E  K  S  L  R  R  C  H  *  Y  K  N  G  L  V  *  L  I  Y  L  C  F  F  W  C  *  L  S  F  V  Q  P  Q  F  P  K  Y  L  C  S  K  A  S  *  M  Y  A  H  F  F  V  L  *  Y  H  K  *  I  H  V  C  V  S  A  C  C  S  L  T  L  S  S  F  *  M  V  *  D  V  N  I  K  L  Q  A  *  S  N  F  S  T  V  P  *  H  Y  H  K  L  A  P </second_frame>
            <third_frame>   S  *  V  P  I  *  F  R  F  L  *  A  E  L  T  V  K  T  P  F  A  M  M  N  P  P  K  S  V  F  S  L  F  Q  S  S  K  M  V  Q  G  A  I  I  Q  L  V  Y  P  P  P  I  M  S  F  D  F  I  Y  *  G  N  Y  V  T  L  C  N  L  I  F  F  L  I  F  F  P  C  L  D  E  V  G  V  V  I  P  F  N  F  Y  S  L  R  L  L  S  D  H  I  K  L  A  S  L  S  R  W  K  R  V  L  E  G  V  I  N  I  R  M  G  W  F  S  L  Y  T  Y  A  S  F  G  A  N  Y  H  L  F  N  L  N  F  Q  N  I  Y  V  L  K  P  L  K  C  M  H  I  F  S  F  S  S  I  I  S  E  F  M  F  V  C  L  L  V  V  P  L  R  F  P  L  F  K  W  Y  E  T  *  I  *  S  F  R  L  D  P  I  L  V  P  Y  L  D  I  T  I  N  *  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0250I21.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60611" stop="60231"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>378</number_coding_nucleotides>
                  <number_encoded_amino_acids>126</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GNYVTLCNLIFFLIFFPCLDEVGVVIPFNFYSLRLLSDHIKLASLSRWKRVLEGVINIRMGWFSLYTYASFGANYHLFNLNFQNIYVLKPLKCMHIFSFSSIISEFMFVCLLVVPLRFPLFKWYET*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="64423" PGL_stop="63036"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64423" e_stop="63996"/>
            <exon e_start="63851" e_stop="63650"/>
            <exon e_start="63557" e_stop="63467"/>
            <exon e_start="63377" e_stop="63036"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="0.951"/>
          <exon-intron don_prob="0.739" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.951">
            <gDNA_exon_boundary e_start="64423" e_stop="63996" e_length="428"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="63995" i_stop="63852" i_length="144"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="63851" e_stop="63650" e_length="202"/>
          </exon>
          <intron i_serial="2" don_prob="0.739" acc_prob="0.994">
            <gDNA_intron_boundary i_start="63649" i_stop="63558" i_length="92"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="63557" e_stop="63467" e_length="91"/>
          </exon>
          <intron i_serial="3" don_prob="0.979" acc_prob="0.995">
            <gDNA_intron_boundary i_start="63466" i_stop="63378" i_length="89"/>
          </intron>
          <exon e_serial="4" e_score="0.991">
            <gDNA_exon_boundary e_start="63377" e_stop="63036" e_length="342"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64423" stop="63996"/>
              <exon start="63851" stop="63650"/>
              <exon start="63557" stop="63476"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605448" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64195" stop="63996"/>
              <exon start="63851" stop="63650"/>
              <exon start="63557" stop="63467"/>
              <exon start="63377" stop="63036"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704343" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTGTCCCACCAACACCTCTGAATTGCTTTTGACACAAACTAGGACCACAAGATTCTCAACTCAAGGGGTTCATTCTGCTACTTTACAACCATCTCCTCTACCAGCAACTCCAGTAAAAAACACGACAAATGAAGATGGTTCATGTTTGTTAAGTGCTGAGAGTACTCCAGCAAAACTTGCATCTACTCCAGCAAAATTGATGAGTACTACACCTTTGCTCCAACCTTCCAAGAGATGCTATATGACTCCAGATGGCGAGTCAACTGAATCACCAAGAAAGCTAGTGAGGCGCCCCCCTCCTAGTAGGTCATTGACCTTTAGTACTCCTGTAAAGAGTTCAAAAGTCACAGAAGAAACCAGCCGGAGCAGAGAATTATCAACAGATGATGAAATCTTTGACATTCTTCCAGAGAATCTTCTGCAGTCG : ATAAGAACAAAAGAGCAGGAGGCACTAGAGGAGCTAGATCCAGCCATATCCCAAGCAAAATGGCGCAAGAAAATGATTTCAATCTTGCCTAAGTTTTTTGACATGATTTACTTCTTATTTCACTCAATTAACCGATCTGTGATCACTAAAGAAGAGCTTACACACAAAGTGATTTCAAGCCATCTAGCTATTGCTGATAAAA : GAGAATTTGAAGAGCTACTACGGTTATTGCAAGAAATAGCTCCTGAATGGATCCATGAAAAGCTGTCATCTAGTGGGGATCTTCTCTTGTG : TGTTAGCAAGGTATCAAATGCTGATTCAATACGCACAAGGATTGCCGAAGCAAAGTGAGAAAGCAATGGCAAGGGGATTTGAGTTCCAAGTGGAGTTGTAAATGATAGTTTCGCTAACTTAATTATTTCGATATATTGACCCACTCTGCAGCATGTGACTGCAATATTTTGCTATTTAGTACAGTTTAATGTCATTTTAACTGGTTTAGCTAGCAATTAGAGCTAAAATAAGCTTGTTAGCGAAGACTGTCTCAATATCTTACCATGTATTGGAGAACACTTTGCTTGTATATAGGCTATAGCCATGATGCTTCTCTTGGAATGAAAATTTGGTAATACTGA</gDNA_template>
            <first_frame> I  V  P  P  T  P  L  N  C  F  *  H  K  L  G  P  Q  D  S  Q  L  K  G  F  I  L  L  L  Y  N  H  L  L  Y  Q  Q  L  Q  *  K  T  R  Q  M  K  M  V  H  V  C  *  V  L  R  V  L  Q  Q  N  L  H  L  L  Q  Q  N  *  *  V  L  H  L  C  S  N  L  P  R  D  A  I  *  L  Q  M  A  S  Q  L  N  H  Q  E  S  *  *  G  A  P  L  L  V  G  H  *  P  L  V  L  L  *  R  V  Q  K  S  Q  K  K  P  A  G  A  E  N  Y  Q  Q  M  M  K  S  L  T  F  F  Q  R  I  F  C  S  R :   *  E  Q  K  S  R  R  H  *  R  S  *  I  Q  P  Y  P  K  Q  N  G  A  R  K  *  F  Q  S  C  L  S  F  L  T  *  F  T  S  Y  F  T  Q  L  T  D  L  *  S  L  K  K  S  L  H  T  K  *  F  Q  A  I  *  L  L  L  I  K  :  E  N  L  K  S  Y  Y  G  Y  C  K  K  *  L  L  N  G  S  M  K  S  C  H  L  V  G  I  F  S  C   : V  L  A  R  Y  Q  M  L  I  Q  Y  A  Q  G  L  P  K  Q  S  E  K  A  M  A  R  G  F  E  F  Q  V  E  L  *  M  I  V  S  L  T  *  L  F  R  Y  I  D  P  L  C  S  M  *  L  Q  Y  F  A  I  *  Y  S  L  M  S  F  *  L  V  *  L  A  I  R  A  K  I  S  L  L  A  K  T  V  S  I  S  Y  H  V  L  E  N  T  L  L  V  Y  R  L  *  P  *  C  F  S  W  N  E  N  L  V  I  L  </first_frame>
            <second_frame>  L  S  H  Q  H  L  *  I  A  F  D  T  N  *  D  H  K  I  L  N  S  R  G  S  F  C  Y  F  T  T  I  S  S  T  S  N  S  S  K  K  H  D  K  *  R  W  F  M  F  V  K  C  *  E  Y  S  S  K  T  C  I  Y  S  S  K  I  D  E  Y  Y  T  F  A  P  T  F  Q  E  M  L  Y  D  S  R  W  R  V  N  *  I  T  K  K  A  S  E  A  P  P  S  *  *  V  I  D  L  *  Y  S  C  K  E  F  K  S  H  R  R  N  Q  P  E  Q  R  I  I  N  R  *  *  N  L  *  H  S  S  R  E  S  S  A  V   : D  K  N  K  R  A  G  G  T  R  G  A  R  S  S  H  I  P  S  K  M  A  Q  E  N  D  F  N  L  A  *  V  F  *  H  D  L  L  L  I  S  L  N  *  P  I  C  D  H  *  R  R  A  Y  T  Q  S  D  F  K  P  S  S  Y  C  *  *  K :   R  I  *  R  A  T  T  V  I  A  R  N  S  S  *  M  D  P  *  K  A  V  I  *  W  G  S  S  L  V  :  C  *  Q  G  I  K  C  *  F  N  T  H  K  D  C  R  S  K  V  R  K  Q  W  Q  G  D  L  S  S  K  W  S  C  K  *  *  F  R  *  L  N  Y  F  D  I  L  T  H  S  A  A  C  D  C  N  I  L  L  F  S  T  V  *  C  H  F  N  W  F  S  *  Q  L  E  L  K  *  A  C  *  R  R  L  S  Q  Y  L  T  M  Y  W  R  T  L  C  L  Y  I  G  Y  S  H  D  A  S  L  G  M  K  I  W  *  Y  * </second_frame>
            <third_frame>   C  P  T  N  T  S  E  L  L  L  T  Q  T  R  T  T  R  F  S  T  Q  G  V  H  S  A  T  L  Q  P  S  P  L  P  A  T  P  V  K  N  T  T  N  E  D  G  S  C  L  L  S  A  E  S  T  P  A  K  L  A  S  T  P  A  K  L  M  S  T  T  P  L  L  Q  P  S  K  R  C  Y  M  T  P  D  G  E  S  T  E  S  P  R  K  L  V  R  R  P  P  P  S  R  S  L  T  F  S  T  P  V  K  S  S  K  V  T  E  E  T  S  R  S  R  E  L  S  T  D  D  E  I  F  D  I  L  P  E  N  L  L  Q  S  :  I  R  T  K  E  Q  E  A  L  E  E  L  D  P  A  I  S  Q  A  K  W  R  K  K  M  I  S  I  L  P  K  F  F  D  M  I  Y  F  L  F  H  S  I  N  R  S  V  I  T  K  E  E  L  T  H  K  V  I  S  S  H  L  A  I  A  D  K   : R  E  F  E  E  L  L  R  L  L  Q  E  I  A  P  E  W  I  H  E  K  L  S  S  S  G  D  L  L  L  C :   V  S  K  V  S  N  A  D  S  I  R  T  R  I  A  E  A  K  *  E  S  N  G  K  G  I  *  V  P  S  G  V  V  N  D  S  F  A  N  L  I  I  S  I  Y  *  P  T  L  Q  H  V  T  A  I  F  C  Y  L  V  Q  F  N  V  I  L  T  G  L  A  S  N  *  S  *  N  K  L  V  S  E  D  C  L  N  I  L  P  C  I  G  E  H  F  A  C  I  *  A  I  A  M  M  L  L  L  E  *  K  F  G  N  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0250I21.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64421" stop="63996"/>
                    <exon start="63851" stop="63650"/>
                    <exon start="63557" stop="63467"/>
                    <exon start="63377" stop="63320"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>774</number_coding_nucleotides>
                  <number_encoded_amino_acids>258</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CPTNTSELLLTQTRTTRFSTQGVHSATLQPSPLPATPVKNTTNEDGSCLLSAESTPAKLASTPAKLMSTTPLLQPSKRCYMTPDGESTESPRKLVRRPPPSRSLTFSTPVKSSKVTEETSRSRELSTDDEIFDILPENLLQSIRTKEQEALEELDPAISQAKWRKKMISILPKFFDMIYFLFHSINRSVITKEELTHKVISSHLAIADKREFEELLRLLQEIAPEWIHEKLSSSGDLLLCVSKVSNADSIRTRIAEAK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="78618" PGL_stop="77919"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="78618" e_stop="77919"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="78618" e_stop="77919" e_length="700"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78618" stop="77919"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E553854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78618" stop="77919"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551661" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAGAGGTATTTGCTTATACGGTATGAAATAGATGAGTTGAACATCATGGTTGAAGATTTGGATCGAAAAGTAAGTGCAGTTCATAACAGGGCAAAAGAAAAACTTGGATTGCCTGTATCCGATGTTTCTAAAGATGCTATCAATGAAGTAGGTATGGAAACAATGAAGCATAAACCTGTAATTCCTAATGTGGAACTCTCCGAGAGTACATCTCACCGTTCAACCTCCAGACAAGCATCAGATATTCAACAGTACAGGAATGTAGATGTTTTCTTTGCACCTTCAGTTGTTCCAAGTTCAACAACAATGAATTTGAACCATCGATCACAATTGAAAGAAAACGTTCATGATGAGAATAAAGTTCTATTGCCAAAAGTATCACAGAATACTGCTGTTGGTGAAAATATTGCAACTTCTTCCAGTACAGTTCTCAAGAAACATCTTGCACAGGGGTCTTCATCGACAGTTAGAGATGTAATTATTCTCAGTGATGATGAAGATTAGCAAACCCCCATACCATATCACAAACGGTAACAAGCATTTATATGTCAGTTCTCTGCTGTAAGTTTGCTGATTGTAAAACTTGAATTATGTAACATGACTGGGAAATGCTCTTTCAACTCAATCTTGGCACTTTGTTTCGTGTATATCTGTTCTGGTACTCTTTTTGTTTAATCGAATCAACAGCTATTGACATTTA</gDNA_template>
            <first_frame> E  R  Y  L  L  I  R  Y  E  I  D  E  L  N  I  M  V  E  D  L  D  R  K  V  S  A  V  H  N  R  A  K  E  K  L  G  L  P  V  S  D  V  S  K  D  A  I  N  E  V  G  M  E  T  M  K  H  K  P  V  I  P  N  V  E  L  S  E  S  T  S  H  R  S  T  S  R  Q  A  S  D  I  Q  Q  Y  R  N  V  D  V  F  F  A  P  S  V  V  P  S  S  T  T  M  N  L  N  H  R  S  Q  L  K  E  N  V  H  D  E  N  K  V  L  L  P  K  V  S  Q  N  T  A  V  G  E  N  I  A  T  S  S  S  T  V  L  K  K  H  L  A  Q  G  S  S  S  T  V  R  D  V  I  I  L  S  D  D  E  D  *  Q  T  P  I  P  Y  H  K  R  *  Q  A  F  I  C  Q  F  S  A  V  S  L  L  I  V  K  L  E  L  C  N  M  T  G  K  C  S  F  N  S  I  L  A  L  C  F  V  Y  I  C  S  G  T  L  F  V  *  S  N  Q  Q  L  L  T  F  </first_frame>
            <second_frame>  R  G  I  C  L  Y  G  M  K  *  M  S  *  T  S  W  L  K  I  W  I  E  K  *  V  Q  F  I  T  G  Q  K  K  N  L  D  C  L  Y  P  M  F  L  K  M  L  S  M  K  *  V  W  K  Q  *  S  I  N  L  *  F  L  M  W  N  S  P  R  V  H  L  T  V  Q  P  P  D  K  H  Q  I  F  N  S  T  G  M  *  M  F  S  L  H  L  Q  L  F  Q  V  Q  Q  Q  *  I  *  T  I  D  H  N  *  K  K  T  F  M  M  R  I  K  F  Y  C  Q  K  Y  H  R  I  L  L  L  V  K  I  L  Q  L  L  P  V  Q  F  S  R  N  I  L  H  R  G  L  H  R  Q  L  E  M  *  L  F  S  V  M  M  K  I  S  K  P  P  Y  H  I  T  N  G  N  K  H  L  Y  V  S  S  L  L  *  V  C  *  L  *  N  L  N  Y  V  T  *  L  G  N  A  L  S  T  Q  S  W  H  F  V  S  C  I  S  V  L  V  L  F  L  F  N  R  I  N  S  Y  *  H  L </second_frame>
            <third_frame>   E  V  F  A  Y  T  V  *  N  R  *  V  E  H  H  G  *  R  F  G  S  K  S  K  C  S  S  *  Q  G  K  R  K  T  W  I  A  C  I  R  C  F  *  R  C  Y  Q  *  S  R  Y  G  N  N  E  A  *  T  C  N  S  *  C  G  T  L  R  E  Y  I  S  P  F  N  L  Q  T  S  I  R  Y  S  T  V  Q  E  C  R  C  F  L  C  T  F  S  C  S  K  F  N  N  N  E  F  E  P  S  I  T  I  E  R  K  R  S  *  *  E  *  S  S  I  A  K  S  I  T  E  Y  C  C  W  *  K  Y  C  N  F  F  Q  Y  S  S  Q  E  T  S  C  T  G  V  F  I  D  S  *  R  C  N  Y  S  Q  *  *  *  R  L  A  N  P  H  T  I  S  Q  T  V  T  S  I  Y  M  S  V  L  C  C  K  F  A  D  C  K  T  *  I  M  *  H  D  W  E  M  L  F  Q  L  N  L  G  T  L  F  R  V  Y  L  F  W  Y  S  F  C  L  I  E  S  T  A  I  D  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0250I21.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="78618" stop="78115"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>501</number_coding_nucleotides>
                  <number_encoded_amino_acids>167</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ERYLLIRYEIDELNIMVEDLDRKVSAVHNRAKEKLGLPVSDVSKDAINEVGMETMKHKPVIPNVELSESTSHRSTSRQASDIQQYRNVDVFFAPSVVPSSTTMNLNHRSQLKENVHDENKVLLPKVSQNTAVGENIATSSSTVLKKHLAQGSSSTVRDVIILSDDED*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="85646" PGL_stop="82050"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85646" e_stop="85477"/>
            <exon e_start="82885" e_stop="82814"/>
            <exon e_start="82662" e_stop="82585"/>
            <exon e_start="82475" e_stop="82050"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="0.941"/>
          <exon-intron don_prob="0.968" acc_prob="0.991" e_score="0.944"/>
          <exon-intron don_prob="0.999" acc_prob="0.461" e_score="1.000"/>
          <exon-only e_score="0.944"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.941">
            <gDNA_exon_boundary e_start="85646" e_stop="85477" e_length="170"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="85476" i_stop="82886" i_length="2591"/>
          </intron>
          <exon e_serial="2" e_score="0.944">
            <gDNA_exon_boundary e_start="82885" e_stop="82814" e_length="72"/>
          </exon>
          <intron i_serial="2" don_prob="0.968" acc_prob="0.991">
            <gDNA_intron_boundary i_start="82813" i_stop="82663" i_length="151"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="82662" e_stop="82585" e_length="78"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.461">
            <gDNA_intron_boundary i_start="82584" i_stop="82476" i_length="109"/>
          </intron>
          <exon e_serial="4" e_score="0.944">
            <gDNA_exon_boundary e_start="82475" e_stop="82050" e_length="426"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85646" stop="85477"/>
              <exon start="82885" stop="82814"/>
              <exon start="82662" stop="82585"/>
              <exon start="82475" stop="82050"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561946" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTAACTCTGTGGCTGTTGGGAATGAGTCTGAGCAAGGTCCTGTCCAGGTTGCTTCTACAGCCACAATTATTAGCACAGGAAAGCTTAAGAGTTCTGTTAGGCGTAGGCCTTGGATACTTGATGATCATGTTGATCACATGGAAGAGAATTTTGAATGTGAATCTGATAAG : GGTTCGTCTTCACACGCTTATCTTCCCAGAGGAGTGATCCGTGGATGTTCCAGTTGTCACAACTGCCAGAAG : GTTATTGCAAGAAGTCGTCCGGAATCGGCACGGATCCCTTCACTTGATGAAGCTCCTGTACTCCATCCTACTGAAGAG : GAATTTAAAGATACTCTCAAGTACGTTGCAAGCATCCTTCCACATGTCAAGCAATATGGAGTATGCCGTATTGTTCCTCCCTCTTCCTGGAGACCACCTTGCCGCATTGAAGAAGAGGACACGAGGTGTGGAGTCAACACTCGTATCCAGCGCATTAGTGACCTCCAGAGTCTGTTTTTAAAGATGAGACTTGAGGGAGCCCATAAGAAGACTAATAATAGGCGGCAGAAAATCCCAAGTATGAAGCCAGAGTTTGGACACAGCGTGGAACGTAAAGAATTTGGTTGTTGTGATGAACACTTTGAATTTGAAAGTGGACCAAAGTTTAAGTTGAAGTCTTTCAAGAATTACGCTGATCATTTCAAGAGGCAGTACTTTGTCAAGGAAGATCAGATCACAGCTTCAAACTTCAATTCAGATGCAATG</gDNA_template>
            <first_frame> V  T  L  W  L  L  G  M  S  L  S  K  V  L  S  R  L  L  L  Q  P  Q  L  L  A  Q  E  S  L  R  V  L  L  G  V  G  L  G  Y  L  M  I  M  L  I  T  W  K  R  I  L  N  V  N  L  I  R :   V  R  L  H  T  L  I  F  P  E  E  *  S  V  D  V  P  V  V  T  T  A  R  R :   L  L  Q  E  V  V  R  N  R  H  G  S  L  H  L  M  K  L  L  Y  S  I  L  L  K  R :   N  L  K  I  L  S  S  T  L  Q  A  S  F  H  M  S  S  N  M  E  Y  A  V  L  F  L  P  L  P  G  D  H  L  A  A  L  K  K  R  T  R  G  V  E  S  T  L  V  S  S  A  L  V  T  S  R  V  C  F  *  R  *  D  L  R  E  P  I  R  R  L  I  I  G  G  R  K  S  Q  V  *  S  Q  S  L  D  T  A  W  N  V  K  N  L  V  V  V  M  N  T  L  N  L  K  V  D  Q  S  L  S  *  S  L  S  R  I  T  L  I  I  S  R  G  S  T  L  S  R  K  I  R  S  Q  L  Q  T  S  I  Q  M  Q   </first_frame>
            <second_frame>  *  L  C  G  C  W  E  *  V  *  A  R  S  C  P  G  C  F  Y  S  H  N  Y  *  H  R  K  A  *  E  F  C  *  A  *  A  L  D  T  *  *  S  C  *  S  H  G  R  E  F  *  M  *  I  *  *   : G  F  V  F  T  R  L  S  S  Q  R  S  D  P  W  M  F  Q  L  S  Q  L  P  E   : G  Y  C  K  K  S  S  G  I  G  T  D  P  F  T  *  *  S  S  C  T  P  S  Y  *  R   : G  I  *  R  Y  S  Q  V  R  C  K  H  P  S  T  C  Q  A  I  W  S  M  P  Y  C  S  S  L  F  L  E  T  T  L  P  H  *  R  R  G  H  E  V  W  S  Q  H  S  Y  P  A  H  *  *  P  P  E  S  V  F  K  D  E  T  *  G  S  P  *  E  D  *  *  *  A  A  E  N  P  K  Y  E  A  R  V  W  T  Q  R  G  T  *  R  I  W  L  L  *  *  T  L  *  I  *  K  W  T  K  V  *  V  E  V  F  Q  E  L  R  *  S  F  Q  E  A  V  L  C  Q  G  R  S  D  H  S  F  K  L  Q  F  R  C  N  </second_frame>
            <third_frame>   N  S  V  A  V  G  N  E  S  E  Q  G  P  V  Q  V  A  S  T  A  T  I  I  S  T  G  K  L  K  S  S  V  R  R  R  P  W  I  L  D  D  H  V  D  H  M  E  E  N  F  E  C  E  S  D  K  :  G  S  S  S  H  A  Y  L  P  R  G  V  I  R  G  C  S  S  C  H  N  C  Q  K  :  V  I  A  R  S  R  P  E  S  A  R  I  P  S  L  D  E  A  P  V  L  H  P  T  E  E  :  E  F  K  D  T  L  K  Y  V  A  S  I  L  P  H  V  K  Q  Y  G  V  C  R  I  V  P  P  S  S  W  R  P  P  C  R  I  E  E  E  D  T  R  C  G  V  N  T  R  I  Q  R  I  S  D  L  Q  S  L  F  L  K  M  R  L  E  G  A  H  K  K  T  N  N  R  R  Q  K  I  P  S  M  K  P  E  F  G  H  S  V  E  R  K  E  F  G  C  C  D  E  H  F  E  F  E  S  G  P  K  F  K  L  K  S  F  K  N  Y  A  D  H  F  K  R  Q  Y  F  V  K  E  D  Q  I  T  A  S  N  F  N  S  D  A  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0250I21.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85644" stop="85477"/>
                    <exon start="82885" stop="82814"/>
                    <exon start="82662" stop="82585"/>
                    <exon start="82475" stop="82050"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>744</number_coding_nucleotides>
                  <number_encoded_amino_acids>248</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSVAVGNESEQGPVQVASTATIISTGKLKSSVRRRPWILDDHVDHMEENFECESDKGSSSHAYLPRGVIRGCSSCHNCQKVIARSRPESARIPSLDEAPVLHPTEEEFKDTLKYVASILPHVKQYGVCRIVPPSSWRPPCRIEEEDTRCGVNTRIQRISDLQSLFLKMRLEGAHKKTNNRRQKIPSMKPEFGHSVERKEFGCCDEHFEFESGPKFKLKSFKNYADHFKRQYFVKEDQITASNFNSDAM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="92198" PGL_stop="92480"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="92198" e_stop="92480"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.926"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.926">
            <gDNA_exon_boundary e_start="92198" e_stop="92480" e_length="283"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92198" stop="92480"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589572" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTCTAGATGTGGCTTATGAGGCAAAAGATGTCATAGATTCAATTATTGTTCGAGATAATGGTCTCTTACATCTTATTTTCTCACTTCCCATTACCATAAAGAAGATCAAACTTATCAAAGAAGAGATCTCTGCTTTAGATGAGAACATTCCCAAGGACAGAGGTCTAATCGTTGTGAACTCTCCCAAGAAACCAGTTGAGAGAAAGTCATTGACAACTGATAAAATAATTGTAGGTTTTGAGGAGGAGACAAACTTGATACTTAGAAAGCTCACCAGTGGAC</gDNA_template>
            <first_frame> V  L  D  V  A  Y  E  A  K  D  V  I  D  S  I  I  V  R  D  N  G  L  L  H  L  I  F  S  L  P  I  T  I  K  K  I  K  L  I  K  E  E  I  S  A  L  D  E  N  I  P  K  D  R  G  L  I  V  V  N  S  P  K  K  P  V  E  R  K  S  L  T  T  D  K  I  I  V  G  F  E  E  E  T  N  L  I  L  R  K  L  T  S  G  </first_frame>
            <second_frame>  F  *  M  W  L  M  R  Q  K  M  S  *  I  Q  L  L  F  E  I  M  V  S  Y  I  L  F  S  H  F  P  L  P  *  R  R  S  N  L  S  K  K  R  S  L  L  *  M  R  T  F  P  R  T  E  V  *  S  L  *  T  L  P  R  N  Q  L  R  E  S  H  *  Q  L  I  K  *  L  *  V  L  R  R  R  Q  T  *  Y  L  E  S  S  P  V  D </second_frame>
            <third_frame>   S  R  C  G  L  *  G  K  R  C  H  R  F  N  Y  C  S  R  *  W  S  L  T  S  Y  F  L  T  S  H  Y  H  K  E  D  Q  T  Y  Q  R  R  D  L  C  F  R  *  E  H  S  Q  G  Q  R  S  N  R  C  E  L  S  Q  E  T  S  *  E  K  V  I  D  N  *  *  N  N  C  R  F  *  G  G  D  K  L  D  T  *  K  A  H  Q  W   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0250I21.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92198" stop="92479"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>282</number_coding_nucleotides>
                  <number_encoded_amino_acids>94</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLDVAYEAKDVIDSIIVRDNGLLHLIFSLPITIKKIKLIKEEISALDENIPKDRGLIVVNSPKKPVERKSLTTDKIIVGFEEETNLILRKLTSG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="94203" PGL_stop="94659"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="94203" e_stop="94659"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.919">
            <gDNA_exon_boundary e_start="94203" e_stop="94659" e_length="457"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94203" stop="94659"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544869" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94203" stop="94627"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544870" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94204" stop="94627"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308524" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATCATCCATGGAGAAGAATGGAACATGGGGGAGGAAGACACCTTTGAGAATCTCAAATTTTTGAACTTGCGTCTACCGACTCTTTCCAAGTGGGAGGTTGGAGAGGAATCCTTCCCCAATCTTGAGAAATTAAAACTGCAGGAATGTGGTAAGTTTGAGGAGATTCCACCTAGTTTTGGAGATATTTATTCATTGAAATTTATCAAAATTGTAAAGAGTCCTCAACTTGAAGATTCTGCTCTCAAGATTAAGGAATACGCTGAAGAAATGAGAGGAGGGAGCGAGCTTCAGATCCTTGGCCAGAAGAATATCCCCTTATTTAAGTAGCATTATGGTTGAAAAGTAGATTGTACTTTGCAGGGTACATTGTATATGATTAAGAAAACTTTGTTGCAGTTATGAAATATTTTTGTGGATTTCTCAAAGTTTCTTCAACAAAAATTATAATTTTTATAAA</gDNA_template>
            <first_frame> I  I  H  G  E  E  W  N  M  G  E  E  D  T  F  E  N  L  K  F  L  N  L  R  L  P  T  L  S  K  W  E  V  G  E  E  S  F  P  N  L  E  K  L  K  L  Q  E  C  G  K  F  E  E  I  P  P  S  F  G  D  I  Y  S  L  K  F  I  K  I  V  K  S  P  Q  L  E  D  S  A  L  K  I  K  E  Y  A  E  E  M  R  G  G  S  E  L  Q  I  L  G  Q  K  N  I  P  L  F  K  *  H  Y  G  *  K  V  D  C  T  L  Q  G  T  L  Y  M  I  K  K  T  L  L  Q  L  *  N  I  F  V  D  F  S  K  F  L  Q  Q  K  L  *  F  L  *  </first_frame>
            <second_frame>  S  S  M  E  K  N  G  T  W  G  R  K  T  P  L  R  I  S  N  F  *  T  C  V  Y  R  L  F  P  S  G  R  L  E  R  N  P  S  P  I  L  R  N  *  N  C  R  N  V  V  S  L  R  R  F  H  L  V  L  E  I  F  I  H  *  N  L  S  K  L  *  R  V  L  N  L  K  I  L  L  S  R  L  R  N  T  L  K  K  *  E  E  G  A  S  F  R  S  L  A  R  R  I  S  P  Y  L  S  S  I  M  V  E  K  *  I  V  L  C  R  V  H  C  I  *  L  R  K  L  C  C  S  Y  E  I  F  L  W  I  S  Q  S  F  F  N  K  N  Y  N  F  Y  K </second_frame>
            <third_frame>   H  P  W  R  R  M  E  H  G  G  G  R  H  L  *  E  S  Q  I  F  E  L  A  S  T  D  S  F  Q  V  G  G  W  R  G  I  L  P  Q  S  *  E  I  K  T  A  G  M  W  *  V  *  G  D  S  T  *  F  W  R  Y  L  F  I  E  I  Y  Q  N  C  K  E  S  S  T  *  R  F  C  S  Q  D  *  G  I  R  *  R  N  E  R  R  E  R  A  S  D  P  W  P  E  E  Y  P  L  I  *  V  A  L  W  L  K  S  R  L  Y  F  A  G  Y  I  V  Y  D  *  E  N  F  V  A  V  M  K  Y  F  C  G  F  L  K  V  S  S  T  K  I  I  I  F  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0250I21.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94203" stop="94529"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>324</number_coding_nucleotides>
                  <number_encoded_amino_acids>108</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IIHGEEWNMGEEDTFENLKFLNLRLPTLSKWEVGEESFPNLEKLKLQECGKFEEIPPSFGDIYSLKFIKIVKSPQLEDSALKIKEYAEEMRGGSELQILGQKNIPLFK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="102063" PGL_stop="102489"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="102063" e_stop="102489"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.916"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.916">
            <gDNA_exon_boundary e_start="102063" e_stop="102489" e_length="427"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102063" stop="102489"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243215" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCAAATTTTTTCTTCGAATACGAAATTAAATTACAATACACAAAAAAATTGTTTAAATTTTTTTCTTTAAACTAAGTAATGAAAGAAAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAGCGAAGTCAAAAAATAATTTATGTATGAAAAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATACCCCTAAATAATTTTTTAAAAAAAATTACAAGTAATAAATATAAATTTAAAACTAATTTTTTAACTTTCGTTAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAGCCGTTTGAATAACGGTAAGGGCATATATAAACCACTTTTATAACGAGGGGTATATCAGCTCCAAATGACAAAATTGAGGGGTAAATCAGACCCTTTTCCCT</gDNA_template>
            <first_frame> T  K  F  F  L  R  I  R  N  *  I  T  I  H  K  K  I  V  *  I  F  F  F  K  L  S  N  E  R  K  K  Q  N  K  N  K  K  L  K  *  L  *  *  A  K  S  K  N  N  L  C  M  K  K  N  *  N  I  P  *  T  L  I  E  E  S  Y  I  P  L  N  N  F  L  K  K  I  T  S  N  K  Y  K  F  K  T  N  F  L  T  F  V  K  *  R  V  Y  V  S  H  F  V  T  A  G  V  Y  V  S  R  L  N  N  G  K  G  I  Y  K  P  L  L  *  R  G  V  Y  Q  L  Q  M  T  K  L  R  G  K  S  D  P  F  P  </first_frame>
            <second_frame>  P  N  F  F  F  E  Y  E  I  K  L  Q  Y  T  K  K  L  F  K  F  F  S  L  N  *  V  M  K  E  K  N  K  I  R  I  R  N  S  N  N  Y  N  K  R  S  Q  K  I  I  Y  V  *  K  K  I  K  I  Y  L  E  L  *  *  K  N  H  I  Y  P  *  I  I  F  *  K  K  L  Q  V  I  N  I  N  L  K  L  I  F  *  L  S  L  N  E  G  Y  M  *  A  I  L  *  R  Q  G  Y  M  *  A  V  *  I  T  V  R  A  Y  I  N  H  F  Y  N  E  G  Y  I  S  S  K  *  Q  N  *  G  V  N  Q  T  L  F  P </second_frame>
            <third_frame>   Q  I  F  S  S  N  T  K  L  N  Y  N  T  Q  K  N  C  L  N  F  F  L  *  T  K  *  *  K  K  K  T  K  *  E  *  E  T  Q  I  I  I  I  S  E  V  K  K  *  F  M  Y  E  K  K  L  K  Y  T  L  N  F  D  R  R  I  I  Y  T  P  K  *  F  F  K  K  N  Y  K  *  *  I  *  I  *  N  *  F  F  N  F  R  *  M  K  G  I  C  E  P  F  C  N  G  R  G  I  C  E  P  F  E  *  R  *  G  H  I  *  T  T  F  I  T  R  G  I  S  A  P  N  D  K  I  E  G  *  I  R  P  F  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0250I21.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="108725" PGL_stop="114034"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="108725" e_stop="108789"/>
            <exon e_start="110077" e_stop="110139"/>
            <exon e_start="110215" e_stop="114034"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.974" acc_prob="0.997" e_score="0.938"/>
          <exon-intron don_prob="0.971" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.948"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.938">
            <gDNA_exon_boundary e_start="108725" e_stop="108789" e_length="65"/>
          </exon>
          <intron i_serial="1" don_prob="0.974" acc_prob="0.997">
            <gDNA_intron_boundary i_start="108790" i_stop="110076" i_length="1287"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="110077" e_stop="110139" e_length="63"/>
          </exon>
          <intron i_serial="2" don_prob="0.971" acc_prob="0.999">
            <gDNA_intron_boundary i_start="110140" i_stop="110214" i_length="75"/>
          </intron>
          <exon e_serial="3" e_score="0.948">
            <gDNA_exon_boundary e_start="110215" e_stop="114034" e_length="3820"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108725" stop="108789"/>
              <exon start="110077" stop="110139"/>
              <exon start="110215" stop="114034"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747625" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108727" stop="108789"/>
              <exon start="110077" stop="110139"/>
              <exon start="110215" stop="113941"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747626" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCAATAGGTTCAGCATTATTTCTCAAACAAAGGGTTCTGTAGCTAAACTTCAGCCTGTGTAAAG : GTCTTGAGAAAAAGTAGAATCATGGAAAAACGAAAAGATAATGAAGAAGCAAACAACTCATTG : GTGTTATTTTCTGCTCTTAGCAAGGACATTGCCGATGTTCTGGTTTTCCTAGAGAATGAGGAAAATCAAAAATCTCTTGACAAAGATGAAGTTGAAAATCTAAAATTGAAAATGGCATTTATTTGTACATATGTTCAGCTTTCTTATTCCGATTTTGAGCAGTTTGAAGATATAATGACGAGAAAAAGACAACAGGTTGAGAATCTGCTTCAATCACTTTTGGATGATGATGTCCTTACTAGCCTCACCAGTAATATGGATGACTGTATCAGCTTGTATCATCGTTCTTATAAATCAGATGCCATCATGATGGATGAGCAATTGGACTTCCTCCTCTTGAATCTGTATCATCTATCCAAGCATCACGCTGAAAAGATATTTCCTGGAGTGACTCAATATGAAGTTCTTCAGAATGTATGTGGCAACCTAAGAGATTTCCATGGGTTGATAGTGAATGGTTGCATTAAGCATGAGATGGTTGAGAATGTCTTACCTCTGTTTCAACTGATGGCTGAAAGAGTAGGACACTTCCTTTGGGAGGATAAGACTGATGAAGACTCGGATGAGGATGATCAGAATGATAGAGACTCTCGACTCTTCCAGCTAACACATCTACTCTTGAAGATTGTTCCAACTGAACTGGAGGTTATGCACATATGTTATACAAATTTGAAAGCTTCAACTTCAGCAGAAGTTGGACGCTTCATTAAGAAGCTCCTGGAAACCTCACCGGATATTCTCAGAGAATATATCATTCAACTACAAGAGCATATGATAACTGTTATTCGCCCTAGCACTTCAGGGGCTCGAAACATTCATGTCATGATGGAATTCCTATTACTTATTCTTTCTGATATGCCCAAGGACTTTATTCATCATGACAAACTTTTTGATCTCTTGGCTCATGTCGGAGTACTTACCAGGGAGGTATCAACTCTTGTACGTGACTTGGAAGAGAAATTAAGGAATAAAGAGGGTAATAACCAAACAAATTGTGCAACCCTAGACTTGCTGGAAAATATTGAACTCCTCAAGAAAGATCTCAAACATGTTTATCTGAAAGCCCCGGATTCATCTCAATGTTGCTTCCCCATGAGTGATGGACCACTCTTCATGCATCTTTTACACATGCACTTAAATGATTTGCTAGATTCTAATGCTTATTCAATTTCTTTGATAAAGGAAGAAATCGAGTTGGTGAAACAAGACCTGGAATTCATAAGATCATTCTTTGTGGATGCTGAGCAAGGATTGTATAAAGATATCTGGGCACGTGTCCTAGATGTGGCTTATGAGGCAAAAGATGTCATAGATTCAATTATTGTTCGAGATAATGGTCTCTTACATCTTATTTTCTCACTTCCCATTACCATAAAGAAGATCAAACTTATCAAAGAAGAGATCTCTGCTTTAGATGAGAGCATTCCCAAGGACAGAGGTCTAATCGCTGTGAACTCTCCCAAGAAACCAGTTGAGAGAAAGTCATTGACAACTAATAAAATAATTGTAGGTTTTGAGGAGGAGACGAACTTGATACTTAGAAAGCTCACCAGTGGACCGGCAGATCTAGATGTCATTTCGATCACTGGTATGCCGGGTTCAGGTAAAACTACTTTGGCATACAAAGTATACAATGATAAGTCAGTTTCTAGCCATTTCGACCTTCGTGCATGGTGCACGGTCGACCAAGGATGTGATGAGAAGAAGTTGTTGAATAAAATTTTCAATCAAGTTAGTGACTCAGATTCAAAATTGAGTGAGAATATTGATGTTCCTGATAAGCTACGGAAACAACTGTATGGAAAGAGGTATCTTATTGTCTTAGATGACGTGTGGGAGACTACTACATGGGATGAGGTGACAAGACCTTTTCCTGAAGCTAAGAAAGGAAGTAGAATTATTTTGACAACTCGAGAAAAGGAAGTAGCTTTGCATGGAAAGCTCTACACTGATCCTCTTGACCTTCGATTGCTAAGACCTGATGAAAGTTGGGAATTATTAGAGAAAAGGGCATTTGGGGACGAGAGTTGCCCTGATGAACTATTAGATGTCGGTAAAGAAATTGCCGAAAATTGTAAAGGGCTTCCTTTGGTGGCTGATCTGATTGCTGGAGTCATTGCTGGGAGGGAAAAGAAAAGGAGTGTGTGGCTTGAAGTTCAAAGTAGTTTGAGTTCTTTTATTTTGAACAGTGAAGTGGAAGTGATGAAAGTTATAGAATTAAGTTATGACCATTTACCACATCACCTCAAGCCATGCTTGCTGTATTTTGCAAGTTTTCCGAAGGACACTTCATTGACAATCTATGAGTTTAATGTTTATTTGGGTGCTGAAGGATTTGTGGGAAAGGCGGAGATGAACAGTATGGAAGAAGTGGTGAAGATTTATATGGATGATTTAATTTCCAGTAGCTTGGTAATTTGTTTCAATGAGATAGGTGATGCACTGAATTTCCAAATTCATGATCTTGTGCATGACTTTTGTTTGATAAAAGCAAGAAAGGAAAATTTGTTTGATCAGATAAGATCAAGTGCTCCAACAGATTTGTTGCCTCGTCAAATTACCATTGATTATGATGATGATGAGGAGCACTTTGGGCTTAATTTTGTCATTTTTGATTCAAATAAGAAAAGGCATTCTGGTAAACACATCTATTCTTTGAGGATTTTTGGAGACGAGCTGGATGACAGTCTTTTTGATACATTTCACCTAAGACACTTGAGGCTTCTTAGAGTGTTGGTCCTGGATACCTCTTTTATCATGGTGAACGATTCTTTGCTGAATGAAATATGCATGTTGAATCATTTGAGGTACTTAAGAATTGGGACACAAGTTAAATATCTGCCTTTGTCTTTCTCAAACCTCTGGAATCTAGAATTATTGTGGGTTGAAAACAAAGAATCAACCTTGATACTATTACCAAGAATTTGGGATCTTGTAAAGCTGCGAGTGCTGTTCGCGGATGCTTGTTCTTTCTTTGATATGGATGCAGATGAATCAATATTGATAGCAGAGGACACAAAGTTAGAGAAGTTGAGAATATTAGGGGAACTGTTGATTTCCTATTCGAAAGATACAAAGAATATTTTCAAAAGGTTTCCCAATCTTCAGATGCTTCAGTTTGAACTCAAGGAGTCATGGGATTATTCAACAGAGCAACATTGGTTCCCGAAATTGGATTGCCTAACTGAACTAGAAATACTCAATGTAGGTTTTAAAAGTTCAAACACAAACCACAGTGGGTCCTCTGTAAAGACAAATCGGCCGTGGGATTTTCACTTTCCTTCAAATTTGAAACAACTGTCATTGCATGACTTTCCTCTGACATCCGATTCACTATCAACAATAGCGAGACTGCCCAACCTTGAAGAGTTGTCCCTTTATGATGCAATCATCCAGGGAGAAGAATGGAACATGGGGGAGGAAGACACCTTTGAGAATCTCAAATTTTTGAACTTGCGTCTAGCGACTCTTTCCAAGTGGGAGGTTGGAGAGGAATCCTTCCCCAATCTTGAGAAGTTAAAACTGCAGGGATGTCGTAAGCTTGAGGAGATTCCACCTAGTTTTGGAGATATTTATTCATTGAAAGTTATCAAAATTGTAAAGAGTCCTCAACTTGAAGATTCTGCTCTCAAGATTAAGGAATACGCTGAAGATATGAGAGGAGGGAGCGAGCTTCAGATCCTTGGCCAGAAGAATATCCCCTTATTTAAGTAGCATTATGGTTGAACTTTGCTGGGTGATATTGTATATGATTAAAATATCCTGTTATGAGATTCCTCTTAGTTTCTTTTAACAAAAAATATAATTTTTATAAGTACAC</gDNA_template>
            <first_frame> S  N  R  F  S  I  I  S  Q  T  K  G  S  V  A  K  L  Q  P  V  *  R :   S  *  E  K  V  E  S  W  K  N  E  K  I  M  K  K  Q  T  T  H  W :   C  Y  F  L  L  L  A  R  T  L  P  M  F  W  F  S  *  R  M  R  K  I  K  N  L  L  T  K  M  K  L  K  I  *  N  *  K  W  H  L  F  V  H  M  F  S  F  L  I  P  I  L  S  S  L  K  I  *  *  R  E  K  D  N  R  L  R  I  C  F  N  H  F  W  M  M  M  S  L  L  A  S  P  V  I  W  M  T  V  S  A  C  I  I  V  L  I  N  Q  M  P  S  *  W  M  S  N  W  T  S  S  S  *  I  C  I  I  Y  P  S  I  T  L  K  R  Y  F  L  E  *  L  N  M  K  F  F  R  M  Y  V  A  T  *  E  I  S  M  G  *  *  *  M  V  A  L  S  M  R  W  L  R  M  S  Y  L  C  F  N  *  W  L  K  E  *  D  T  S  F  G  R  I  R  L  M  K  T  R  M  R  M  I  R  M  I  E  T  L  D  S  S  S  *  H  I  Y  S  *  R  L  F  Q  L  N  W  R  L  C  T  Y  V  I  Q  I  *  K  L  Q  L  Q  Q  K  L  D  A  S  L  R  S  S  W  K  P  H  R  I  F  S  E  N  I  S  F  N  Y  K  S  I  *  *  L  L  F  A  L  A  L  Q  G  L  E  T  F  M  S  *  W  N  S  Y  Y  L  F  F  L  I  C  P  R  T  L  F  I  M  T  N  F  L  I  S  W  L  M  S  E  Y  L  P  G  R  Y  Q  L  L  Y  V  T  W  K  R  N  *  G  I  K  R  V  I  T  K  Q  I  V  Q  P  *  T  C  W  K  I  L  N  S  S  R  K  I  S  N  M  F  I  *  K  P  R  I  H  L  N  V  A  S  P  *  V  M  D  H  S  S  C  I  F  Y  T  C  T  *  M  I  C  *  I  L  M  L  I  Q  F  L  *  *  R  K  K  S  S  W  *  N  K  T  W  N  S  *  D  H  S  L  W  M  L  S  K  D  C  I  K  I  S  G  H  V  S  *  M  W  L  M  R  Q  K  M  S  *  I  Q  L  L  F  E  I  M  V  S  Y  I  L  F  S  H  F  P  L  P  *  R  R  S  N  L  S  K  K  R  S  L  L  *  M  R  A  F  P  R  T  E  V  *  S  L  *  T  L  P  R  N  Q  L  R  E  S  H  *  Q  L  I  K  *  L  *  V  L  R  R  R  R  T  *  Y  L  E  S  S  P  V  D  R  Q  I  *  M  S  F  R  S  L  V  C  R  V  Q  V  K  L  L  W  H  T  K  Y  T  M  I  S  Q  F  L  A  I  S  T  F  V  H  G  A  R  S  T  K  D  V  M  R  R  S  C  *  I  K  F  S  I  K  L  V  T  Q  I  Q  N  *  V  R  I  L  M  F  L  I  S  Y  G  N  N  C  M  E  R  G  I  L  L  S  *  M  T  C  G  R  L  L  H  G  M  R  *  Q  D  L  F  L  K  L  R  K  E  V  E  L  F  *  Q  L  E  K  R  K  *  L  C  M  E  S  S  T  L  I  L  L  T  F  D  C  *  D  L  M  K  V  G  N  Y  *  R  K  G  H  L  G  T  R  V  A  L  M  N  Y  *  M  S  V  K  K  L  P  K  I  V  K  G  F  L  W  W  L  I  *  L  L  E  S  L  L  G  G  K  R  K  G  V  C  G  L  K  F  K  V  V  *  V  L  L  F  *  T  V  K  W  K  *  *  K  L  *  N  *  V  M  T  I  Y  H  I  T  S  S  H  A  C  C  I  L  Q  V  F  R  R  T  L  H  *  Q  S  M  S  L  M  F  I  W  V  L  K  D  L  W  E  R  R  R  *  T  V  W  K  K  W  *  R  F  I  W  M  I  *  F  P  V  A  W  *  F  V  S  M  R  *  V  M  H  *  I  S  K  F  M  I  L  C  M  T  F  V  *  *  K  Q  E  R  K  I  C  L  I  R  *  D  Q  V  L  Q  Q  I  C  C  L  V  K  L  P  L  I  M  M  M  M  R  S  T  L  G  L  I  L  S  F  L  I  Q  I  R  K  G  I  L  V  N  T  S  I  L  *  G  F  L  E  T  S  W  M  T  V  F  L  I  H  F  T  *  D  T  *  G  F  L  E  C  W  S  W  I  P  L  L  S  W  *  T  I  L  C  *  M  K  Y  A  C  *  I  I  *  G  T  *  E  L  G  H  K  L  N  I  C  L  C  L  S  Q  T  S  G  I  *  N  Y  C  G  L  K  T  K  N  Q  P  *  Y  Y  Y  Q  E  F  G  I  L  *  S  C  E  C  C  S  R  M  L  V  L  S  L  I  W  M  Q  M  N  Q  Y  *  *  Q  R  T  Q  S  *  R  S  *  E  Y  *  G  N  C  *  F  P  I  R  K  I  Q  R  I  F  S  K  G  F  P  I  F  R  C  F  S  L  N  S  R  S  H  G  I  I  Q  Q  S  N  I  G  S  R  N  W  I  A  *  L  N  *  K  Y  S  M  *  V  L  K  V  Q  T  Q  T  T  V  G  P  L  *  R  Q  I  G  R  G  I  F  T  F  L  Q  I  *  N  N  C  H  C  M  T  F  L  *  H  P  I  H  Y  Q  Q  *  R  D  C  P  T  L  K  S  C  P  F  M  M  Q  S  S  R  E  K  N  G  T  W  G  R  K  T  P  L  R  I  S  N  F  *  T  C  V  *  R  L  F  P  S  G  R  L  E  R  N  P  S  P  I  L  R  S  *  N  C  R  D  V  V  S  L  R  R  F  H  L  V  L  E  I  F  I  H  *  K  L  S  K  L  *  R  V  L  N  L  K  I  L  L  S  R  L  R  N  T  L  K  I  *  E  E  G  A  S  F  R  S  L  A  R  R  I  S  P  Y  L  S  S  I  M  V  E  L  C  W  V  I  L  Y  M  I  K  I  S  C  Y  E  I  P  L  S  F  F  *  Q  K  I  *  F  L  *  V  H </first_frame>
            <second_frame>  P  I  G  S  A  L  F  L  K  Q  R  V  L  *  L  N  F  S  L  C  K   : G  L  E  K  K  *  N  H  G  K  T  K  R  *  *  R  S  K  Q  L  I   : G  V  I  F  C  S  *  Q  G  H  C  R  C  S  G  F  P  R  E  *  G  K  S  K  I  S  *  Q  R  *  S  *  K  S  K  I  E  N  G  I  Y  L  Y  I  C  S  A  F  L  F  R  F  *  A  V  *  R  Y  N  D  E  K  K  T  T  G  *  E  S  A  S  I  T  F  G  *  *  C  P  Y  *  P  H  Q  *  Y  G  *  L  Y  Q  L  V  S  S  F  L  *  I  R  C  H  H  D  G  *  A  I  G  L  P  P  L  E  S  V  S  S  I  Q  A  S  R  *  K  D  I  S  W  S  D  S  I  *  S  S  S  E  C  M  W  Q  P  K  R  F  P  W  V  D  S  E  W  L  H  *  A  *  D  G  *  E  C  L  T  S  V  S  T  D  G  *  K  S  R  T  L  P  L  G  G  *  D  *  *  R  L  G  *  G  *  S  E  *  *  R  L  S  T  L  P  A  N  T  S  T  L  E  D  C  S  N  *  T  G  G  Y  A  H  M  L  Y  K  F  E  S  F  N  F  S  R  S  W  T  L  H  *  E  A  P  G  N  L  T  G  Y  S  Q  R  I  Y  H  S  T  T  R  A  Y  D  N  C  Y  S  P  *  H  F  R  G  S  K  H  S  C  H  D  G  I  P  I  T  Y  S  F  *  Y  A  Q  G  L  Y  S  S  *  Q  T  F  *  S  L  G  S  C  R  S  T  Y  Q  G  G  I  N  S  C  T  *  L  G  R  E  I  K  E  *  R  G  *  *  P  N  K  L  C  N  P  R  L  A  G  K  Y  *  T  P  Q  E  R  S  Q  T  C  L  S  E  S  P  G  F  I  S  M  L  L  P  H  E  *  W  T  T  L  H  A  S  F  T  H  A  L  K  *  F  A  R  F  *  C  L  F  N  F  F  D  K  G  R  N  R  V  G  E  T  R  P  G  I  H  K  I  I  L  C  G  C  *  A  R  I  V  *  R  Y  L  G  T  C  P  R  C  G  L  *  G  K  R  C  H  R  F  N  Y  C  S  R  *  W  S  L  T  S  Y  F  L  T  S  H  Y  H  K  E  D  Q  T  Y  Q  R  R  D  L  C  F  R  *  E  H  S  Q  G  Q  R  S  N  R  C  E  L  S  Q  E  T  S  *  E  K  V  I  D  N  *  *  N  N  C  R  F  *  G  G  D  E  L  D  T  *  K  A  H  Q  W  T  G  R  S  R  C  H  F  D  H  W  Y  A  G  F  R  *  N  Y  F  G  I  Q  S  I  Q  *  *  V  S  F  *  P  F  R  P  S  C  M  V  H  G  R  P  R  M  *  *  E  E  V  V  E  *  N  F  Q  S  S  *  *  L  R  F  K  I  E  *  E  Y  *  C  S  *  *  A  T  E  T  T  V  W  K  E  V  S  Y  C  L  R  *  R  V  G  D  Y  Y  M  G  *  G  D  K  T  F  S  *  S  *  E  R  K  *  N  Y  F  D  N  S  R  K  G  S  S  F  A  W  K  A  L  H  *  S  S  *  P  S  I  A  K  T  *  *  K  L  G  I  I  R  E  K  G  I  W  G  R  E  L  P  *  *  T  I  R  C  R  *  R  N  C  R  K  L  *  R  A  S  F  G  G  *  S  D  C  W  S  H  C  W  E  G  K  E  K  E  C  V  A  *  S  S  K  *  F  E  F  F  Y  F  E  Q  *  S  G  S  D  E  S  Y  R  I  K  L  *  P  F  T  T  S  P  Q  A  M  L  A  V  F  C  K  F  S  E  G  H  F  I  D  N  L  *  V  *  C  L  F  G  C  *  R  I  C  G  K  G  G  D  E  Q  Y  G  R  S  G  E  D  L  Y  G  *  F  N  F  Q  *  L  G  N  L  F  Q  *  D  R  *  C  T  E  F  P  N  S  *  S  C  A  *  L  L  F  D  K  S  K  K  G  K  F  V  *  S  D  K  I  K  C  S  N  R  F  V  A  S  S  N  Y  H  *  L  *  *  *  *  G  A  L  W  A  *  F  C  H  F  *  F  K  *  E  K  A  F  W  *  T  H  L  F  F  E  D  F  W  R  R  A  G  *  Q  S  F  *  Y  I  S  P  K  T  L  E  A  S  *  S  V  G  P  G  Y  L  F  Y  H  G  E  R  F  F  A  E  *  N  M  H  V  E  S  F  E  V  L  K  N  W  D  T  S  *  I  S  A  F  V  F  L  K  P  L  E  S  R  I  I  V  G  *  K  Q  R  I  N  L  D  T  I  T  K  N  L  G  S  C  K  A  A  S  A  V  R  G  C  L  F  F  L  *  Y  G  C  R  *  I  N  I  D  S  R  G  H  K  V  R  E  V  E  N  I  R  G  T  V  D  F  L  F  E  R  Y  K  E  Y  F  Q  K  V  S  Q  S  S  D  A  S  V  *  T  Q  G  V  M  G  L  F  N  R  A  T  L  V  P  E  I  G  L  P  N  *  T  R  N  T  Q  C  R  F  *  K  F  K  H  K  P  Q  W  V  L  C  K  D  K  S  A  V  G  F  S  L  S  F  K  F  E  T  T  V  I  A  *  L  S  S  D  I  R  F  T  I  N  N  S  E  T  A  Q  P  *  R  V  V  P  L  *  C  N  H  P  G  R  R  M  E  H  G  G  G  R  H  L  *  E  S  Q  I  F  E  L  A  S  S  D  S  F  Q  V  G  G  W  R  G  I  L  P  Q  S  *  E  V  K  T  A  G  M  S  *  A  *  G  D  S  T  *  F  W  R  Y  L  F  I  E  S  Y  Q  N  C  K  E  S  S  T  *  R  F  C  S  Q  D  *  G  I  R  *  R  Y  E  R  R  E  R  A  S  D  P  W  P  E  E  Y  P  L  I  *  V  A  L  W  L  N  F  A  G  *  Y  C  I  *  L  K  Y  P  V  M  R  F  L  L  V  S  F  N  K  K  Y  N  F  Y  K  Y   </second_frame>
            <third_frame>   Q  *  V  Q  H  Y  F  S  N  K  G  F  C  S  *  T  S  A  C  V  K  :  V  L  R  K  S  R  I  M  E  K  R  K  D  N  E  E  A  N  N  S  L  :  V  L  F  S  A  L  S  K  D  I  A  D  V  L  V  F  L  E  N  E  E  N  Q  K  S  L  D  K  D  E  V  E  N  L  K  L  K  M  A  F  I  C  T  Y  V  Q  L  S  Y  S  D  F  E  Q  F  E  D  I  M  T  R  K  R  Q  Q  V  E  N  L  L  Q  S  L  L  D  D  D  V  L  T  S  L  T  S  N  M  D  D  C  I  S  L  Y  H  R  S  Y  K  S  D  A  I  M  M  D  E  Q  L  D  F  L  L  L  N  L  Y  H  L  S  K  H  H  A  E  K  I  F  P  G  V  T  Q  Y  E  V  L  Q  N  V  C  G  N  L  R  D  F  H  G  L  I  V  N  G  C  I  K  H  E  M  V  E  N  V  L  P  L  F  Q  L  M  A  E  R  V  G  H  F  L  W  E  D  K  T  D  E  D  S  D  E  D  D  Q  N  D  R  D  S  R  L  F  Q  L  T  H  L  L  L  K  I  V  P  T  E  L  E  V  M  H  I  C  Y  T  N  L  K  A  S  T  S  A  E  V  G  R  F  I  K  K  L  L  E  T  S  P  D  I  L  R  E  Y  I  I  Q  L  Q  E  H  M  I  T  V  I  R  P  S  T  S  G  A  R  N  I  H  V  M  M  E  F  L  L  L  I  L  S  D  M  P  K  D  F  I  H  H  D  K  L  F  D  L  L  A  H  V  G  V  L  T  R  E  V  S  T  L  V  R  D  L  E  E  K  L  R  N  K  E  G  N  N  Q  T  N  C  A  T  L  D  L  L  E  N  I  E  L  L  K  K  D  L  K  H  V  Y  L  K  A  P  D  S  S  Q  C  C  F  P  M  S  D  G  P  L  F  M  H  L  L  H  M  H  L  N  D  L  L  D  S  N  A  Y  S  I  S  L  I  K  E  E  I  E  L  V  K  Q  D  L  E  F  I  R  S  F  F  V  D  A  E  Q  G  L  Y  K  D  I  W  A  R  V  L  D  V  A  Y  E  A  K  D  V  I  D  S  I  I  V  R  D  N  G  L  L  H  L  I  F  S  L  P  I  T  I  K  K  I  K  L  I  K  E  E  I  S  A  L  D  E  S  I  P  K  D  R  G  L  I  A  V  N  S  P  K  K  P  V  E  R  K  S  L  T  T  N  K  I  I  V  G  F  E  E  E  T  N  L  I  L  R  K  L  T  S  G  P  A  D  L  D  V  I  S  I  T  G  M  P  G  S  G  K  T  T  L  A  Y  K  V  Y  N  D  K  S  V  S  S  H  F  D  L  R  A  W  C  T  V  D  Q  G  C  D  E  K  K  L  L  N  K  I  F  N  Q  V  S  D  S  D  S  K  L  S  E  N  I  D  V  P  D  K  L  R  K  Q  L  Y  G  K  R  Y  L  I  V  L  D  D  V  W  E  T  T  T  W  D  E  V  T  R  P  F  P  E  A  K  K  G  S  R  I  I  L  T  T  R  E  K  E  V  A  L  H  G  K  L  Y  T  D  P  L  D  L  R  L  L  R  P  D  E  S  W  E  L  L  E  K  R  A  F  G  D  E  S  C  P  D  E  L  L  D  V  G  K  E  I  A  E  N  C  K  G  L  P  L  V  A  D  L  I  A  G  V  I  A  G  R  E  K  K  R  S  V  W  L  E  V  Q  S  S  L  S  S  F  I  L  N  S  E  V  E  V  M  K  V  I  E  L  S  Y  D  H  L  P  H  H  L  K  P  C  L  L  Y  F  A  S  F  P  K  D  T  S  L  T  I  Y  E  F  N  V  Y  L  G  A  E  G  F  V  G  K  A  E  M  N  S  M  E  E  V  V  K  I  Y  M  D  D  L  I  S  S  S  L  V  I  C  F  N  E  I  G  D  A  L  N  F  Q  I  H  D  L  V  H  D  F  C  L  I  K  A  R  K  E  N  L  F  D  Q  I  R  S  S  A  P  T  D  L  L  P  R  Q  I  T  I  D  Y  D  D  D  E  E  H  F  G  L  N  F  V  I  F  D  S  N  K  K  R  H  S  G  K  H  I  Y  S  L  R  I  F  G  D  E  L  D  D  S  L  F  D  T  F  H  L  R  H  L  R  L  L  R  V  L  V  L  D  T  S  F  I  M  V  N  D  S  L  L  N  E  I  C  M  L  N  H  L  R  Y  L  R  I  G  T  Q  V  K  Y  L  P  L  S  F  S  N  L  W  N  L  E  L  L  W  V  E  N  K  E  S  T  L  I  L  L  P  R  I  W  D  L  V  K  L  R  V  L  F  A  D  A  C  S  F  F  D  M  D  A  D  E  S  I  L  I  A  E  D  T  K  L  E  K  L  R  I  L  G  E  L  L  I  S  Y  S  K  D  T  K  N  I  F  K  R  F  P  N  L  Q  M  L  Q  F  E  L  K  E  S  W  D  Y  S  T  E  Q  H  W  F  P  K  L  D  C  L  T  E  L  E  I  L  N  V  G  F  K  S  S  N  T  N  H  S  G  S  S  V  K  T  N  R  P  W  D  F  H  F  P  S  N  L  K  Q  L  S  L  H  D  F  P  L  T  S  D  S  L  S  T  I  A  R  L  P  N  L  E  E  L  S  L  Y  D  A  I  I  Q  G  E  E  W  N  M  G  E  E  D  T  F  E  N  L  K  F  L  N  L  R  L  A  T  L  S  K  W  E  V  G  E  E  S  F  P  N  L  E  K  L  K  L  Q  G  C  R  K  L  E  E  I  P  P  S  F  G  D  I  Y  S  L  K  V  I  K  I  V  K  S  P  Q  L  E  D  S  A  L  K  I  K  E  Y  A  E  D  M  R  G  G  S  E  L  Q  I  L  G  Q  K  N  I  P  L  F  K  *  H  Y  G  *  T  L  L  G  D  I  V  Y  D  *  N  I  L  L  *  D  S  S  *  F  L  L  T  K  N  I  I  F  I  S  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0250I21.2" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108772" stop="108789"/>
                    <exon start="110077" stop="110139"/>
                    <exon start="110215" stop="113928"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>3792</number_coding_nucleotides>
                  <number_encoded_amino_acids>1264</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSACVKVLRKSRIMEKRKDNEEANNSLVLFSALSKDIADVLVFLENEENQKSLDKDEVENLKLKMAFICTYVQLSYSDFEQFEDIMTRKRQQVENLLQSLLDDDVLTSLTSNMDDCISLYHRSYKSDAIMMDEQLDFLLLNLYHLSKHHAEKIFPGVTQYEVLQNVCGNLRDFHGLIVNGCIKHEMVENVLPLFQLMAERVGHFLWEDKTDEDSDEDDQNDRDSRLFQLTHLLLKIVPTELEVMHICYTNLKASTSAEVGRFIKKLLETSPDILREYIIQLQEHMITVIRPSTSGARNIHVMMEFLLLILSDMPKDFIHHDKLFDLLAHVGVLTREVSTLVRDLEEKLRNKEGNNQTNCATLDLLENIELLKKDLKHVYLKAPDSSQCCFPMSDGPLFMHLLHMHLNDLLDSNAYSISLIKEEIELVKQDLEFIRSFFVDAEQGLYKDIWARVLDVAYEAKDVIDSIIVRDNGLLHLIFSLPITIKKIKLIKEEISALDESIPKDRGLIAVNSPKKPVERKSLTTNKIIVGFEEETNLILRKLTSGPADLDVISITGMPGSGKTTLAYKVYNDKSVSSHFDLRAWCTVDQGCDEKKLLNKIFNQVSDSDSKLSENIDVPDKLRKQLYGKRYLIVLDDVWETTTWDEVTRPFPEAKKGSRIILTTREKEVALHGKLYTDPLDLRLLRPDESWELLEKRAFGDESCPDELLDVGKEIAENCKGLPLVADLIAGVIAGREKKRSVWLEVQSSLSSFILNSEVEVMKVIELSYDHLPHHLKPCLLYFASFPKDTSLTIYEFNVYLGAEGFVGKAEMNSMEEVVKIYMDDLISSSLVICFNEIGDALNFQIHDLVHDFCLIKARKENLFDQIRSSAPTDLLPRQITIDYDDDEEHFGLNFVIFDSNKKRHSGKHIYSLRIFGDELDDSLFDTFHLRHLRLLRVLVLDTSFIMVNDSLLNEICMLNHLRYLRIGTQVKYLPLSFSNLWNLELLWVENKESTLILLPRIWDLVKLRVLFADACSFFDMDADESILIAEDTKLEKLRILGELLISYSKDTKNIFKRFPNLQMLQFELKESWDYSTEQHWFPKLDCLTELEILNVGFKSSNTNHSGSSVKTNRPWDFHFPSNLKQLSLHDFPLTSDSLSTIARLPNLEELSLYDAIIQGEEWNMGEEDTFENLKFLNLRLATLSKWEVGEESFPNLEKLKLQGCRKLEEIPPSFGDIYSLKVIKIVKSPQLEDSALKIKEYAEDMRGGSELQILGQKNIPLFK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="122840" PGL_stop="131996"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="122840" e_stop="123036"/>
            <exon e_start="131614" e_stop="131996"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.939"/>
          <exon-only e_score="0.896"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.939">
            <gDNA_exon_boundary e_start="122840" e_stop="123036" e_length="197"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="123037" i_stop="131613" i_length="8577"/>
          </intron>
          <exon e_serial="2" e_score="0.896">
            <gDNA_exon_boundary e_start="131614" e_stop="131996" e_length="383"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="122840" stop="123036"/>
              <exon start="131614" stop="131996"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301194" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTGTTAGGGCGTAGCTTAGCACTATATATAGACGCTATGGCAAACCCTATTCTGTAATTCTGTTTTTGCCTCTCCATAATAAAACTGCTCCCTCTCTTCCCCGTGGATGTAGCCAATTTATTGGTGAACCACGTAAATCTGTTGTCTTGTTTTTTGCGTTTATATTTTCACGTATTATCTCGAATTTCGCACAACA : CTCTTAATATTCATAACTCTCATCTTTTCATATTCATAACTTCCAAATATTTAAACTAAAACTTTAAGATATCTTTTGATATTCCTTCTATTCTGTTTATATAAATTCAACTTCTTTATCTCATGAAACCCTACCAAGATTATTAGGATATTATTTTTATTCTATAGTAAAAACAGATGATGAAGATTCTTGAATTTTGATAGGATATGAAAGGAATCAATAAAAACTCAGAGAGTTATGTACTAATTTTGTACTTATTTTTTCATCTATATATACATCAATCTTATAAGAATAATGTCGATATTTTATTTTTTCTTAAATATTCTGTTTCTTTTTATCTTTTTTTACTCTGTTAGACTTCTTAATTTAGTTTTCTAAAAGAG</gDNA_template>
            <first_frame> S  V  R  A  *  L  S  T  I  Y  R  R  Y  G  K  P  Y  S  V  I  L  F  L  P  L  H  N  K  T  A  P  S  L  P  R  G  C  S  Q  F  I  G  E  P  R  K  S  V  V  L  F  F  A  F  I  F  S  R  I  I  S  N  F  A  Q  H :   S  *  Y  S  *  L  S  S  F  H  I  H  N  F  Q  I  F  K  L  K  L  *  D  I  F  *  Y  S  F  Y  S  V  Y  I  N  S  T  S  L  S  H  E  T  L  P  R  L  L  G  Y  Y  F  Y  S  I  V  K  T  D  D  E  D  S  *  I  L  I  G  Y  E  R  N  Q  *  K  L  R  E  L  C  T  N  F  V  L  I  F  S  S  I  Y  T  S  I  L  *  E  *  C  R  Y  F  I  F  S  *  I  F  C  F  F  L  S  F  F  T  L  L  D  F  L  I  *  F  S  K  R  </first_frame>
            <second_frame>  L  L  G  R  S  L  A  L  Y  I  D  A  M  A  N  P  I  L  *  F  C  F  C  L  S  I  I  K  L  L  P  L  F  P  V  D  V  A  N  L  L  V  N  H  V  N  L  L  S  C  F  L  R  L  Y  F  H  V  L  S  R  I  S  H  N   : T  L  N  I  H  N  S  H  L  F  I  F  I  T  S  K  Y  L  N  *  N  F  K  I  S  F  D  I  P  S  I  L  F  I  *  I  Q  L  L  Y  L  M  K  P  Y  Q  D  Y  *  D  I  I  F  I  L  *  *  K  Q  M  M  K  I  L  E  F  *  *  D  M  K  G  I  N  K  N  S  E  S  Y  V  L  I  L  Y  L  F  F  H  L  Y  I  H  Q  S  Y  K  N  N  V  D  I  L  F  F  L  K  Y  S  V  S  F  Y  L  F  L  L  C  *  T  S  *  F  S  F  L  K  E </second_frame>
            <third_frame>   C  *  G  V  A  *  H  Y  I  *  T  L  W  Q  T  L  F  C  N  S  V  F  A  S  P  *  *  N  C  S  L  S  S  P  W  M  *  P  I  Y  W  *  T  T  *  I  C  C  L  V  F  C  V  Y  I  F  T  Y  Y  L  E  F  R  T  T  :  L  L  I  F  I  T  L  I  F  S  Y  S  *  L  P  N  I  *  T  K  T  L  R  Y  L  L  I  F  L  L  F  C  L  Y  K  F  N  F  F  I  S  *  N  P  T  K  I  I  R  I  L  F  L  F  Y  S  K  N  R  *  *  R  F  L  N  F  D  R  I  *  K  E  S  I  K  T  Q  R  V  M  Y  *  F  C  T  Y  F  F  I  Y  I  Y  I  N  L  I  R  I  M  S  I  F  Y  F  F  L  N  I  L  F  L  F  I  F  F  Y  S  V  R  L  L  N  L  V  F  *  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0250I21.2" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="122898" stop="123036"/>
                    <exon start="131614" stop="131672"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FCFCLSIIKLLPLFPVDVANLLVNHVNLLSCFLRLYFHVLSRISHNTLNIHNSHLFIFITSKYLN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 87 chains have been computed
$ 
$ memory statistics:
$ 56272 bytes spliced alignments in total
$ 20 spliced alignments have been stored
$ 2813 bytes was the average size of a spliced alignment
$ 20088 bytes predicted gene locations in total
$ 13 predicted gene locations have been stored
$ 1545 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 103 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 05:58:52
-->
