<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-14 17:44:16"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06SLm0062L07-MA9aD/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06SLm0062L07-MA9aD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0062L07-MA9aD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318987" ref_strand="+" ref_description="SGN-U318987        Tomato 200607 #1 [15 ESTs aligned] arabidopsis/peptide: | Symbol: None | glycerophosphoryl diester phosphodiesterase family protein, low similarity to glycerophosphodiester phosphodiesterase (Borrelia hermsii) GI:1399038; contains Pfam profile PF03009: Glycerophosphoryl diester phosphodiesterase family | chr1:27913979-27916602 FORWARD | Aliases: F1O17.12, F1O17_12(evalue: 6e-146, score=514) genbank/nr: gi|15221164|ref|NP_177561.1| glycerophosphodiester phosphodiesterase -related [Arabidopsis thaliana] gi|25406323|pir||D96770 hypothetical protein F1O17.12 [imported] - Arabidopsis thaliana gi|12324904|gb|AAG52406.1| putative glycerophosphodiester phosphodiesterase; 42559-40170 [Arabidopsis thaliana] gi|17381162|gb|AAL36393.1| putative glycerophosphodiester phosphodiesterase [Arabidopsis thaliana] gi|21592460|gb|AAM64411.1| putative glycerophosphodiester phosphodiesterase [Arabidopsis thaliana] gi|23296874|gb|AAN13192.1| putative glycerophosphodiester phosphodiesterase [Arabidopsis thaliana](evalue: 5e-144, score=514)">
      <seq>aggagtgaggaagaaggagacagtcaccatggattccccaagtgttatcccttatatctttttgctacttcttgttggatgctcggccagacctctctacccacttcctggcagaagaaatgataggaataaacagcctttacaaacatttcgagcttacaacattgcacaccgaggttcaaatggagaaattcctgaagaaactgcagcagcatacatgagagctattgaagagggtactgatttcatcgaaacagatattttagcatctaaagacggcgctcttatatgtttccatgatgtcatacttgatgatacaactgatatagcaaatcacaaggaatttgctgatcgaaagaggacctatgatgttcaaggggttaacactactggatattttctggttgacttcacccttgaagaattgaagcttctgcgtgttaagcagagatatcctttcagagatcagcaatataatggagaattttctatcattacttttgaggagttcatctcaattgcattggatgcccatagagttgttggaatatatccagagataaaaaatccagtccttatcaaccaacacgtcaaatggccaggtggtaagaaatttgaggacaagtttgttgagacactgaagaagtatggatacaaaggttcatatatgtcgaagcaatggttaaagcagcctgcattcattcaatcttttgcgccgacgtcactaatttatatatcaaaccaaacggacctgcctaagatcttcctcattgatgacacaaatacaccaactcaagacaccaatcagtcatattgggagattactgcagatggttatcttgattatatcaaggattatgtggtggggattggtccctggaaggacaccatagttccttgttccaacaattatctgcaaacaccttctgatctcatcgcaagagcacatgcccgtaatctacaggtgcatccatacactttccggaatgagaaccaattcgtacacttcaacttcagtgaagatccatacaacgagtatgactactggataaacaagatgggagttgatggcctcttcacagacttcacaggcagccttcaccactatcaggaatggaccaatccatttgcatctggagaaaaagaagcaactaggcttctgaataagattgaattgatgctttccaagttcaagtacacctgagttaaattctattcaacattgtctgtggcaaggcaatgctatttattggtctgtatatatcattggctttccaatttatatttgccaaaagaaaaaacaggtttcaatatattgtaattggtgcaaatgacactcttgaagcatttggacccttaaaaacctattttttagattatggatttattccagagtttaaagggttcggaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0062L07-MA9aD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0062L07.1" temp_strand="+" temp_description="C06SLm0062L07.1  AC219223.1 htgs_phase:3 submitted_to_sgn_as:C06SLm0062L07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="5185" stop="11206"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5485" g_stop="5525" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5526" i_stop="7719" i_length="2194">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.895" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7720" g_stop="7898" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="220" r_length="179" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7899" i_stop="8160" i_length="262">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.937" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8161" g_stop="8344" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="404" r_length="184" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8345" i_stop="8534" i_length="190">
            <donor d_prob="0.822" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8535" g_stop="8609" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="479" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8610" i_stop="8827" i_length="218">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="8828" g_stop="8937" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="480" r_stop="589" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="8938" i_stop="9070" i_length="133">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="9071" g_stop="9289" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="590" r_stop="808" r_length="219" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="9290" i_stop="9728" i_length="439">
            <donor d_prob="0.905" d_score="1.00"/>
            <acceptor a_prob="0.863" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="9729" g_stop="9884" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="809" r_stop="964" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="9885" i_stop="10471" i_length="587">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="10472" g_stop="10902" g_length="431"/>
          <reference_exon_boundary r_type="cDNA" r_start="965" r_stop="1395" r_length="431" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1410" polyA_stop="1419"/>
      <MATCH_line gen_id="C06SLm0062L07.1" gen_strand="+" ref_id="SGN-U318987" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>1395</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0062L07.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U318987" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5485" e_stop="5525"/>
          <exon e_start="7720" e_stop="7898"/>
          <exon e_start="8161" e_stop="8344"/>
          <exon e_start="8535" e_stop="8609"/>
          <exon e_start="8828" e_stop="8937"/>
          <exon e_start="9071" e_stop="9289"/>
          <exon e_start="9729" e_stop="9884"/>
          <exon e_start="10472" e_stop="10902"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAGTGAGGAAGAAGGAGACAGTCACCATGGATTCCCCAAGTAAGTATTACAATCCCCAGTTTTGTTGTTTCTGTGTTTCGTTATGTTATTTGTTGTATTTGGTGTTGGAATGAAATAGAGCAGGGTGGATTTAGTTATAATGCCCTCTATTTCGTATTATTCTACGAGTTAGAGGTAAGGTCTGTGTATATTCTAATCTCACCGACCAAAACAATGGGATTATACGGTATGTTGTTGTTGTTATTATGGTTTACCTTAGCTAGTTTGGGATTATGTTTGTATTCTAGGAATGTAATTTTTTCAATATTGTCACTTGGTTCTTGAAAATTGTGTATTTTAGCTTAGATTGTGTATATCTACAACCCCTTTATGTATATAGCTGCTGGATTAAGTGGAATCATTTGAAAGATTGTTTTTTTTCTGGGTTTTTAACTTTTAAGTTCTCTATGGGCTCAAATCTTTCAAGTAATGTACAGTGACAATTAGTTATTGAAATCTGCACTCAGATTATATGTCTACTCATAATTTACTTCGAGTAAATGGGAAGGTTGAACAGTTTTTCAACTGTGTGCCTTGTCTGGTGCTCTGACAATTACAAATTCTTGTCAAGGCATTTCCCAGTAAGCACGCATTATATGCAGTGTCTTTGCATTTATTTGATATCTAATTAACTTGTGGTGATACCATAACTTTATATATTATGGGGAGTAGGTGGTGCTGATACAAGAAAATAAAGAGATAAGTGTGTTAAAATCTACTCGTCTCATTAATACATGACAGATTTACACCTTTAAATTGGTTGGTAACTCTTTATGTGAGAAATTGTATGCAACTTTAATATTTTACATGCTAAGTTGGGGTTGCTAAATTCAGTTTCTGTAGGTCAATCTGGCCCCATAAAACTTCAGAGAGGTTTAGCGTTGGTAGTAGTAATTGTTCAACTCTCAATGGTTTTGTGGGCTCTCTGCGTCCCCATTAATATTATGTGATGTTAGGTGAATTTGTAGTCTCCTTTGTTCCCAACCATAGAATCCCAAATGATATTAACTGGAGTGGAAACGTGAGCGTTGAACTTATCTTTCTAGTTCAAAGTGAATGTCATGGCGTGACTTGACACAATTTCTTAAATTAAATTGGGAAGAAAAGTAAGAATAGTTTTTGAATTTGGAAAATCCTGCTTAATTTTTTCGAGGTATCATATTCAATGAGGCGTGAAATGTTAAAACACTTTGTTTCCAAATATAGGATATAAACATGGATGTTGAGGATTCATATAGTTGAACCCCACTGATTTTGAGTTCAGCATTGTTGTTGTTGTTGTAGATTATAGAATTTACATTTAGGATCAGCTGAAAAAAGAATCTTAGCTCCAAATAAAAAACGGAGCAGTCTTAGTTACTGTTCATTTAGATAGAATTGAAAGTTCAGCGAGATGTCACTTATTTCAATTGCTATGATGTGTAGTATTGTGCATCATATAAAGATGGTTCATAATCTAAGTCGGGTTCAAATTAGCTCAATCTAATTAGTTAACCAAATATCACAGAAGGAATATAAAGGATTACTGTAGGCAAGCCAACTAGCGTGTGATTGAAAGCAGTTGATTCATAGAATTAGTGAACCAAATTATGGCCACCAAAAAAAATCCTATTATAGATTAAATCTTATTTCCCATTATTGATTTTCAGAATAAGAATTGAATGTATATCTAGTCTAGTACTTTGTCCAAAGTTCATAAGGGTATCCCATATTAAACTAGGATGTAAACATTGGATTGAACTTGTTATGATATATTCCGATATCCTGTGTCGCAAGTACTATCCAGCTATGCTTTGGCTGAACAAATCGTTGGCTGTATATTCTTCGCACATTTATCATGCTGCCTGTTGCTAAACATGTGTATTGACCATAACTATCGACTAATCCTAATTTAGAACTGAGACACAGTGGTTCTGGTGTGAGTATTGCTTGTTAATTTCCAAAGGTTTTCCTTGTTTTAGATTGAAAGTTAAGATGTTATAACTTTTCTCAAGCTGCAATGAATTGGATTATCAGAATAGATCAATTGATGTCAAGTGCATGCATTCATGTATATTGGTCTCTCCATACATGCACCATTATATATACCATGTTCACGTGTGAAATCATTGGCCGTAGATAGACAAGCATAGGTAACGTTTATAATCATGTGTTCATATATAGAATCTTACATCTTTCTCAATGTACTTTACAGGTGTTATCCCTTATATCTTTTTGCTACTTCTTGTTGGATGCTCGGCCAGACCTCTCTACCCACTTCCTGGCAGAAGAAATGATAGGAATAAACAGCCTTTACAAACATTTCGAGCTTACAACATTGCACACCGAGGTTCAAATGGAGAAATTCCTGAAGAAACTGCAGCAGCATACATGGTATGTCTACAATAGAATCATCATATAATTTTCAAAACATCCAGTTTCCAAAGTAGTAACTAGAAACCGGGTCTAGTCTCCAATAAAATGGCTTCACTTATGGTCACATGGTTGATACTTAAAGTACAATTATAGGGAAAATTCTTTTTGATGTTTGTAAAACACCTTTCTGCTTGCAGTAACTGATGTTGAAATAGAAGCAAACAGGTTGTTTATATAAATAAACTGCAAAACATGCCCCTGAAACTCTAGTATTATGCAGAGAGCTATTGAAGAGGGTACTGATTTCATCGAAACAGATATTTTAGCATCTAAAGACGGCGCTCTTATATGTTTCCATGATGTCATACTTGATGATACAACTGATATAGCAAATCACAAGGAATTTGCTGATCGAAAGAGGACCTATGATGTTCAAGGGGTTAACACTACTGGATATTTTCTGGGTATGGATGTTATAATTTCACTTGTGCTAACTTCTGTTTTATTACATTGATAATAGAATATGTCCTCTTGCTGTCACATTGTGTTAGCTTCATTTTATTCAGTTTACCTTCCAAGTATTGTACTATTTCTTTACTGATATGATATGTATCATTACTTCATCTATTAGTAATTTCTTGTACTATTATGCAGTTGACTTCACCCTTGAAGAATTGAAGCTTCTGCGTGTTAAGCAGAGATATCCTTTCAGAGATCAGCAATATAATGGTTAGTTTTCTAAACGTTCCTATAAACATAAAACAAGATAGAGAAATTTATGCTATGTGAAATGTTACATCAACAAAAAATGGTGCTTTTGATTGACTCTTCCCAACAACAAGGCATGCGTGCTCCTGCTATTACTCTATATGAGGATAGTTTCTTCAGAAAAATGCATCTCACTGCCTCCAATATTTTCACCTTTTCCGTTTTCAATTAACTGGCAGGAGAATTTTCTATCATTACTTTTGAGGAGTTCATCTCAATTGCATTGGATGCCCATAGAGTTGTTGGAATATATCCAGAGATAAAAAATCCAGTCCTTATCAACCAACACGTGAGTTCATTCCCTTTCTGCTACAAAATTGGTCAAACTGATATTATTGCAGAGTATGTTTTGCTGGAAAATCAATTGATACCCTTATGTATTACTTTCAGTTATCTTATACACTAACTACTGGTTCCAACAGGTCAAATGGCCAGGTGGTAAGAAATTTGAGGACAAGTTTGTTGAGACACTGAAGAAGTATGGATACAAAGGTTCATATATGTCGAAGCAATGGTTAAAGCAGCCTGCATTCATTCAATCTTTTGCGCCGACGTCACTAATTTATATATCAAACCAAACGGACCTGCCTAAGATCTTCCTCATTGATGACACAAATACACCAACTCAAGACACCAATCAGGTTTTCATCCCCTCTCTCCTAGCTAGCACTGTATGTTACAAAGAAGAAGTTGGCTATCTTATGTTGGAAATGCTAAATTCGAGATAGAAAACAAAGAAAGTTTTTACCCACAATTTAGAAGCATATACAAAAAGGAAATCCAAACTTTTAGGACTTCGATAAAAGTATCAACTACATCTGCAGTCTAGACACACCGGTAAAGATTTGTATAAAGCATGTAATATTCAGATCTTGTTTAAAAGTTTACAGGATTAACAAGTACACTTTACAGGCTTGATAAAAAATAAAAATTTTCTGTTTGCTGATTAAGAAATTAACCTCCATTCTAACATGTATTCCCTTTTTAGGAATATAGTTTTGTTGAAAAGATACCCTAGAGAAATCTGATTGTCACACTGTTTTGCTATTTAGAAAATTAATGATCCTTTTTACATTTCAGTCATATTGGGAGATTACTGCAGATGGTTATCTTGATTATATCAAGGATTATGTGGTGGGGATTGGTCCCTGGAAGGACACCATAGTTCCTTGTTCCAACAATTATCTGCAAACACCTTCTGATCTCATCGCAAGAGCACATGCCCGTAATCTACAGGTATCTGATCAATCATTGATTATGGGATATCATTGACATGTGAAGTTAATTGATGATATGATATTTTCTTCCACTGGTCTCTGTTCCACGGTTTTTGATTTTATTGTGCGCTAATATTAGATTACTGTTAATTGAAGGAAAAGGAAATACCTATATATCATGTAAAGTGATATCATGTAAAGTGTTTTCAATTGACATGTTATGTACATTTCTAACTTGTTGAGTCTGTTCTGTTGTAAGTTTGAGGGGTGCTGGGTTGCTTCTAGTTGGTGAATGTCTGCCTCTAAGTTCCAAGGTTATTGTTTTTACATCTAATTCTTAGAGAACCTAATGAGTCACTATGCATTAATGACTAGTGCCTTCTATCATAGATCTGCTATCATCTTATGTTTAGCACGCCTCTTCTTAGAATTGTCGAGTTTCCATTAACTAGTGCCTTCTGAATTATTGAGTTTTCAAAGAAAATGAATGAACCTGCTTTACTACCTATCTCATGTGTAGAAATGGTATTTCTTTTTTCTCCTTTTCCGTGCAATTCATCTTAATTTCATACATATTCATCCTCTGAATTTCAATAACAAATTCAGGTGCATCCATACACTTTCCGGAATGAGAACCAATTCGTACACTTCAACTTCAGTGAAGATCCATACAACGAGTATGACTACTGGATAAACAAGATGGGAGTTGATGGCCTCTTCACAGACTTCACAGGCAGCCTTCACCACTATCAGGAATGGACCAATCCATTTGCATCTGGAGAAAAAGAAGCAACTAGGCTTCTGAATAAGATTGAATTGATGCTTTCCAAGTTCAAGTACACCTGAGTTAAATTCTATTCAACATTGTCTGTGGCAAGGCAATGCTATTTATTGGTCTGTATATATCATTGGCTTTCCAATTTATATTTGCCAAAAGAAAAAACAGGTTTCAATATATTGTAATTGGTGCAAATGACACTCTTGAAGCATTTGGACCCTCTTAACCCTATCTCTTAGATTATGGATTTATACAAGAG</genome_strand>
        <mrna_strand>AGGAGTGAGGAAGAAGGAGACAGTCACCATGGATTCCCCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTATCCCTTATATCTTTTTGCTACTTCTTGTTGGATGCTCGGCCAGACCTCTCTACCCACTTCCTGGCAGAAGAAATGATAGGAATAAACAGCCTTTACAAACATTTCGAGCTTACAACATTGCACACCGAGGTTCAAATGGAGAAATTCCTGAAGAAACTGCAGCAGCATACATG......................................................................................................................................................................................................................................................................AGAGCTATTGAAGAGGGTACTGATTTCATCGAAACAGATATTTTAGCATCTAAAGACGGCGCTCTTATATGTTTCCATGATGTCATACTTGATGATACAACTGATATAGCAAATCACAAGGAATTTGCTGATCGAAAGAGGACCTATGATGTTCAAGGGGTTAACACTACTGGATATTTTCTGG..............................................................................................................................................................................................TTGACTTCACCCTTGAAGAATTGAAGCTTCTGCGTGTTAAGCAGAGATATCCTTTCAGAGATCAGCAATATAATG..........................................................................................................................................................................................................................GAGAATTTTCTATCATTACTTTTGAGGAGTTCATCTCAATTGCATTGGATGCCCATAGAGTTGTTGGAATATATCCAGAGATAAAAAATCCAGTCCTTATCAACCAACAC.....................................................................................................................................GTCAAATGGCCAGGTGGTAAGAAATTTGAGGACAAGTTTGTTGAGACACTGAAGAAGTATGGATACAAAGGTTCATATATGTCGAAGCAATGGTTAAAGCAGCCTGCATTCATTCAATCTTTTGCGCCGACGTCACTAATTTATATATCAAACCAAACGGACCTGCCTAAGATCTTCCTCATTGATGACACAAATACACCAACTCAAGACACCAATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATATTGGGAGATTACTGCAGATGGTTATCTTGATTATATCAAGGATTATGTGGTGGGGATTGGTCCCTGGAAGGACACCATAGTTCCTTGTTCCAACAATTATCTGCAAACACCTTCTGATCTCATCGCAAGAGCACATGCCCGTAATCTACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCATCCATACACTTTCCGGAATGAGAACCAATTCGTACACTTCAACTTCAGTGAAGATCCATACAACGAGTATGACTACTGGATAAACAAGATGGGAGTTGATGGCCTCTTCACAGACTTCACAGGCAGCCTTCACCACTATCAGGAATGGACCAATCCATTTGCATCTGGAGAAAAAGAAGCAACTAGGCTTCTGAATAAGATTGAATTGATGCTTTCCAAGTTCAAGTACACCTGAGTTAAATTCTATTCAACATTGTCTGTGGCAAGGCAATGCTATTTATTGGTCTGTATATATCATTGGCTTTCCAATTTATATTTGCCAAAAGAAAAAACAGGTTTCAATATATTGTAATTGGTGCAAATGACACTCTTGAAGCATTTGGACCCTTAAAAACCTATTTTTTAGATTATGGATTTATTCCAGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0062L07-MA9aD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U322066" ref_strand="+" ref_description="SGN-U322066        Tomato 200607 #1 [8 ESTs aligned] arabidopsis/peptide: | Symbol: None | Encodes a predicted protein with 30% identity with MER3/RCK. | chr5:24607225-24620740 FORWARD | Aliases: MAF19.14, MAF19_14(evalue: 4e-162, score=568) genbank/nr: gi|30697481|ref|NP_200922.2| DEAD box RNA helicase, putative [Arabidopsis thaliana](evalue: 3e-160, score=568)">
      <seq>tgaaagtagcctgagagagcaacttcatgaccacatcaacgctgagattgttactggaacaatctctcataaagaggacgctatgcattatctcacttggacctacttgtttcgtagattgatggttaacccagcttactatggcctagagcatgcagaacctgggattctaaattcttatttgtctagcttggtgcaaagcacatttgaggatcttgaagactctggatgcatcaaggttaccgaggacagtgttgaaccactgatgttgggctcaatagcatctcagtattatctgaagtacaccactgtatcaatgtttggctcaaaaataggatctgatacatcacttgaggttttcctacaaatactgtctggtgcttctgaatatgatgagctcccggtgaggcataatgaggaaaactacaatgaaaaattagctgagaaagttccatatgctgtcgaccacaatcgcctggatgatcctcatgtgaaagcaaatctgctctttcaggctcatttttcccaatcagagttgccaatcagcgattatgtcacagacttaaagtctgtgctggatcaaagtatacgtgttatccaggctatgatagatatttgtgccaacagtggatggctctcaagtaccattacctgtatgcatctgttgcaaatggtcatgcagggcttgtggtttgatagagactctcctctttggatgttaccatgcatgactgatgatctactcaactcattgcaaaaaaaaggaattgctagtatccagcagctgttggattgcccttcagaatcattacgggctatcactggaagttcagctgcctcgaaactgtatcaggatatgcggcatttccctcggattcaagttcgacttaaaattcagccaaaggaatctaatggtggaaagattttaaccttgaacattagattggaagatgcaaatactcagcgaagaacagcaaaagcttttatcccacgatatccaaaggtaaaagatgaagcttggtggttagtcctttgtaatacttccgcaagtgaactgtatgctctgaagagagtgtctttctctggtcgtttgcagacacacatggatttgccatccactctgaccaatttccaggggataaagctcattctagtatcggattcttacattgggtttgaacaagaacactctattgaaggattgacttaatctggaagaaactataccaactccagattgtaatgcaatgctcccaaaatcaggatttgactttgtatagcacaaaggctcactttttcacaatcagttatagaagttgtgttacggtctacatttgtaatgagatattgctttgtaattttcttgagtaattgatcggcatccttcatttttctttgtcatgtagatccaattgtatatatgcatcagggtactgttgaaagtcttatacacacaccctaatcaatatagagctttccattcaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0062L07-MA9aD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0062L07.1" temp_strand="+" temp_description="C06SLm0062L07.1  AC219223.1 htgs_phase:3 submitted_to_sgn_as:C06SLm0062L07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="33642" stop="41656"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33942" g_stop="34062" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34063" i_stop="35617" i_length="1555">
            <donor d_prob="0.308" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35618" g_stop="35685" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="189" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35686" i_stop="35763" i_length="78">
            <donor d_prob="0.933" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35764" g_stop="35929" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="355" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="35930" i_stop="36031" i_length="102">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="36032" g_stop="36094" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="418" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="36095" i_stop="36443" i_length="349">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="36444" g_stop="36539" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="514" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="36540" i_stop="36805" i_length="266">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="36806" g_stop="36973" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="515" r_stop="682" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="36974" i_stop="39135" i_length="2162">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="39136" g_stop="39306" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="683" r_stop="853" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="39307" i_stop="40251" i_length="945">
            <donor d_prob="0.887" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="40252" g_stop="40401" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="854" r_stop="1003" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="40402" i_stop="40466" i_length="65">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="40467" g_stop="40598" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="1004" r_stop="1135" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="40599" i_stop="41006" i_length="408">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="41007" g_stop="41362" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="1136" r_stop="1491" r_length="356" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0062L07.1" gen_strand="+" ref_id="SGN-U322066" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1491</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0062L07.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U322066" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33942" e_stop="34062"/>
          <exon e_start="35618" e_stop="35685"/>
          <exon e_start="35764" e_stop="35929"/>
          <exon e_start="36032" e_stop="36094"/>
          <exon e_start="36444" e_stop="36539"/>
          <exon e_start="36806" e_stop="36973"/>
          <exon e_start="39136" e_stop="39306"/>
          <exon e_start="40252" e_stop="40401"/>
          <exon e_start="40467" e_stop="40598"/>
          <exon e_start="41007" e_stop="41362"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAAGTAGCCTGAGAGAGCAACTTCATGACCACATCAACGCTGAGATTGTTACTGGAACAATCTCTCATAAAGAGGACGCTATGCATTATCTCACTTGGACCTACTTGTTTCGTAGATTGGTATGGTTTTGTGATCCTATGGCAGAGAATTTATTTTGTTGCTCCAAATTTATAGTCTTGCATTACCGATCAAGAAAAAATTTCAATCTTGCAGCAATGGCAATGCTAAGTTAGGAACCACCATCATTATATTAAGAGTGCTTGATGCATGTTTTTCTTTCAGCAAGTAATCATCAGTAATAAGTAGGTTACTTGGTTGCTGATTGATATGGGTTACTCATTTAAGGTAAATATATTAATATGAAATTTCTAAAGAAGATGTAGGTAACTAAGTTGTGTCTCCTACAGTGAAGAACATATAAATGGAAATCCAGTAAAGGAAATGAGTCCTTTATAATAAGGTAACACGGGAGATTTATGAGTTGATTAATTTAGCTTGCAAAAAGAAAAGTTAAGGGAGGCCACAATAGTGCAACCTTGTTCTGATTTTATCTTGCTTATGTTATCTTTTCCGGAAGTCTCAAATTTTATTTTCTAAGTAAGCATTACCAACATGTGACAACTGAAACTGGAAAAAGAAAGTGGTAGGTAAAGGGCTAATTTCAGTTGTACCATAGTGATCTTTATGGTAACATGATTTGTTTCAGATTGTGGTGGACTCCAAAATCTATATTATTGTAATCAACTAGCAGACAAAGGGAACACACTTCAGGCAGCAGCTAAAGTTGCACAAGAAAATATGTGTCTGTTTGATGTGCTTTTACAAGCTTACTGCTGCTAGATACCATCAAAGCATTTTCTATGAAAAAAGTTGGGAGAAAGTGAGGTCTACCCCACGTACCAAAGTCTTGTCAAAGTGCAAGTTGAAATAGCTCGTCAGCTTTAACCAGACCCTAAGGGATAGGAATAGCTAATCCACAAATTATGTGTAGTAATTATCTAACTTGATTGACCCTTGTTTATTTATGTAACATAAGATTATTTTAGATTCAAAATGAGAGAGCTGATTTAAAGCAATAACAATCAGCATTGAGTGGTAAAACAATGGTTTGCTTATGCTATTCATTGTATCCTTCCGCCCCAACAAATGTAGTGCCAACTGTAGGTGTTGATGTTGCATGTGTATTATTTTCCACCTTGTGGGAAAGAACAAAAGAAAAGTTACATTTCTGTGTACTGCCTGTATAGATGCCTTTTATATAGTGAATAATTGATCTATGGGTTAGTCACAATAGGGAATAATTGGTTATTCCGTGGTTCAAATGGAATTCTTGCCCTAGTGGCAAGGTCCCTCCACCTCCAGTCACTAATATGTGGTTCGGGACACTCAGAGGGAAAAGTAGGCGAGCACTGTTTCTCCTGGGAAGGGGAAGCATTGAGGTAAAGAAGGATGTTACCAATTTAAAAAAAAAAAAAAAGATAAAGGAGGAGATGATATGTCACCTAAATGAAAAGGATGAGAAGAAAGTCAATTTTCACCTCAATCTACTAATGTATTTCTGTGGATTGACAATGTCATCAAAGAAAATCTTATATGTTTGAAGAATTACCAAAAATAGTGTACTGTTCTTTCCCTGCTAGTTATTATGTTTATTAACCATAGAAGTTTTTGCAGATGGTTAACCCAGCTTACTATGGCCTAGAGCATGCAGAACCTGGGATTCTAAATTCTTATTTGTCTAGGTAAAATGAAAGCACTACATAGTCTTGAAATAGCTTTTCTTGTATATTTCTGTGTGTGCTCACATTATTTATGAACAGCTTGGTGCAAAGCACATTTGAGGATCTTGAAGACTCTGGATGCATCAAGGTTACCGAGGACAGTGTTGAACCACTGATGTTGGGCTCAATAGCATCTCAGTATTATCTGAAGTACACCACTGTATCAATGTTTGGCTCAAAAATAGGATCTGATACATCACTTGAGGTTTGTAGAACACCTAACATGGATGTCTAATCCTTATTTCTCTATTTCAATGTTTTTAAATTATATTTCTTGGCATTACTTCCTATTTATCTTTCACCCCAGGTTTTCCTACAAATACTGTCTGGTGCTTCTGAATATGATGAGCTCCCGGTGAGGCATAATGAGGTAATTTTTTTAGCTAGGCAATATATATATATATATATATATATATATATATATTTGAAGACAGTTGTTGCTGAACAATGGTTTGTTGGTTTTCAACTCTCTTAATTTCTTTACTTTTTTCCCTTAGTTGTATATTACTTGCTAGTTCTAACTAGTAAACCAATAACATTGATGTCCTGGCATTACACCAATTGTTGCAGACACTTCTGAATTATTGTCTGCAAATCTAAATTAGTATCGATAATTCCGCTAAGAAATTGCCTGGATTTTGAAACTATCAAACTATGCATCAACTACTTCTTTATTTGTATGTTGTACACATCATCTGCTTATTGATCACCTATTCCAGGAAAACTACAATGAAAAATTAGCTGAGAAAGTTCCATATGCTGTCGACCACAATCGCCTGGATGATCCTCATGTGAAAGCAAATCTGCTCTTTCAGGTATAGGTTATGGCTTTGTCTGCTAGGTTCTACTTAAAGTCAATATATCTTTCAGGGAACAACCGCAGCCTTCGTAACCTGGGGATGATGCCCCCTCCCCCCCTCTCTTTTATCCTTCTCCACTTAAATACCAAAATTTAGTTTGCATGGCGCAGAGCTTTAACACCCCAAGTCACAAGTCCCTCAAGTTTGCTTCCTGAACTAGGTCCTGGGGTTATAATATTTTTTGCTCTTCTACTCATCCCTTACACATCTCACTTTTGCAGGCTCATTTTTCCCAATCAGAGTTGCCAATCAGCGATTATGTCACAGACTTAAAGTCTGTGCTGGATCAAAGTATACGTGTTATCCAGGCTATGATAGATATTTGTGCCAACAGTGGATGGCTCTCAAGTACCATTACCTGTATGCATCTGTTGCAAATGGTCATGCAGGTCTTGCTACTGCTTCCAAAGCTTCCTTTATCTATTCACTGTAAAATGGACTACTATACTGCTTTTATCAACTCTTTTATACTTATTTCTATATTCCTATCATTTTCTTTTCTCATTTTGGGTTGCCAACATGTCCTTGTATGGAATACAAACTTGTTTTTTTTTCAAAAAAAGAAATAAAAGATTCACCTCGTAATGAGAGAGAGTAAAGAAAAACAACTATCAAATTCCAAATTGTTGAATATTATAATTTTTTTGGGTTCGTTTTATCATCAATTCTAACGTACAAAGAGATAAGAGTTGAGCTATGGTGCAACACAACATCACATATTCCCGTTATTTTTTCCCTGTACTTCCTGTTAAGAATAAATCTTATTCAGAGTAGCGTCCAGCTATCTAGATGTGATCTTTATGGATGTATAACATGTTTCTGTTTTGTTGCATTCTGCAAATTACTTGACCATGGAAAATATGTATATCACTATGTAGATGTTTGTTATCCAGCTTATCACTAACTCTTATATCTAGATGAAGTGAAAGTTCTGAAGTATCTGAACAAGAAAGAGCTTCTTTTCAACCTTCTTCTAGAAATTGTTTGTGGTTAGTATTATGCACCAAAATATGCTCCTTGACAAACTTTTCATAACCAACACACTTCATGCGATGTAGAAGTTGTCAGCCTAGTAATGACATATGGGAGTGAATGTTCGTCCTCCAAGTCCAATTTCAACAAGATAAATATCATAGAAATGAAGATATTAAGATGGATGTGCAGTTACAATATATAAATCAGCGTATTAAGATGAATGTATATTCCTACAAAATTTTGGATAGGATTATATAATGATAACACCAAACGAAGGGTGTAAGTAGCACATATGGAAATTAAATGAGAGGCTGCATGAAATGGTTTTGCTATGTCATGCTAAACCTCCATATGCACCAATATATAGATGTGTACCTATGAAAGGTGTGAATTGGATATATGGAAGGCCTAAAATAATGTTTTAGCAAAAAATACTGGCCCCGGCGAGGTTAAAGTGGCCCGTGACATTGGGAGGGCCATGTGACTGTTGTTTCAGATCTCGAGTCCTAGATGTGAAATCCTTGAAATTCAAGAATGGACTGGGACGACTGAAGATTCCTGAGTAAGGCTGTTTTGAACCAAGCTCCATCACAATTAGGTCAAAACCGCATATAATGGAGCTAACTCAAGTCATGGGCGCTTGGATATGTTAGAATAGGATTGTACATAGTATCATATATGGAAAAGGATTCTAGTGTAATATAAATATGGCTCAGTGCAGTAATTCAGTTCTTACATTAATTCAATATGATTTTTCCCATGATTTTACTTCTCCCAAATGGTATCAGAGCATGAGCCATCTCAATTGTCATTTCCAATGTTGGGCCTCTAATAAATTACCCAGGCACTGGCAGTTCATTCAGGATGTTAAACTTCGTATTCTATCGGGAAACCTTTAATATATTCTTTTTTTCTCTCTCTATTTATGACCATTCTCACTTCAAAGTCAAAGATTAGGAAATTCTCTTGATTTTGGATATTATGGCCTCCTAGAAAACTAGAAACGATTTAGCATAGCTCTCGCAACTATCGGCGAAGGAGAAAGTTGTCCGTAATTCATTGCCTATTTTGAGGCTACAACTGTTATGAAAATATCAGATGGGAGAAGGAGAACTAGTTCGGCAATTAGACTGATGTTCATCCCTAGGCATGAGGGGTGTGTAAAGAGTCCCTCATTGGTTGGTTGTCTGATTATGCAATCAAAGTTTTTCAGTGTTTGCGAGTATTTTATTCGGGTAAAGACTTTTTTGTCAACATAGGAATAAGTTTAAGATTTAGAGTATCTTTGTGATTTGAAAATCACTATTCTGTTTTCGAAGACAATTGTTCTAGTATTAAAACATAATTGGCCCGAATAGAGGTGAAAAGATGCAGATGATTTACACAGATCCAACTAGTTTTGGATTAATGCTAGTTGGTTGATTTGGTTGATCATTTAGAATATCTTTAAAATGATGGTTTTGAACAAGTTTTTGGTATTTTTACTAGATTTTACCCTTTATTATAAACTAGGTCATTAGCAACTGAACTTTGTCCTTGAGCATCATTTGATTATTCGTCTTTGTTTAATCTACAGGGCTTGTGGTTTGATAGAGACTCTCCTCTTTGGATGTTACCATGCATGACTGATGATCTACTCAACTCATTGCAAAAAAAAGGAATTGCTAGTATCCAGCAGCTGTTGGATTGCCCTTCAGAATCATTACGGGCTATCACTGGAAGTTCAGCTGCCTCGAAACTGTATCAGGTGTTCTAATTAGTTTTAGTAGTTGATTACGTTTTGGATAAATCATCTCTCCTGTCACTGCAATTTTTGTTGATGTATTGCATCCTAAGAATGTTTGTTTTGAACAAGCGTCAAACATCTATGAGTAGAACTTACTCCACATGGTTAGGAGGTTAGTGTGAACGGTTATGTTCTAATAAAGTTATTGCATAATGCATGTGTACCAGTATCTTACTATTTTTGTCGGCACTAAGCTATAAATCACATGTGGATTTCTTTGTAAATCAAGTTTGTATAATGATAAATGGGGAATATCGATAAGGACGAGCATATGGAGGGATATTCTTAAATTTATGATCATCTCTTCTAAAAGCTTAATCTATTAGAGAGTCACTTTTATTTACTTACGATTTCAACATGCTCCCATAATGTGGGCCTAATTATTTTTTATGGGTCGAACACGTTGATTTCCTTTTCTGATAATGGGTGACAGTGAGACTCGAACCCAAAACCTTTGTTTGCTCTGATGACATGTTAAGTTATATCTCATTTAAAAGCTTAAAGATGTTAGAGAGAGTGCATTTGTATTTGCTTAATTATATCTTCAACAGAATTGATTGTCTTCAGCAGAACCTTGTTGATGTAGCATTCCCGACTTCTTGTCCCAGCTTGACGTCGAAAGACCTATTTTTGTACATACTTTTTATGAGTTCTAAAATTTCCTTCCTTCCTCACACATCATTCCCGGGGTATTTATTCCATGTTTTTTGGGGCCTCCCATTTCCTCTCTTGAAGGATCTCTTGATTTTATGCTAGGGAGAGCTTGTAATGATGCTCTTTATCATTGTATGTGCTAATATTTATTGTCAAAAGCCACTTTTGTACTGTGCATGGTAAGTACATCTCTGCTTCTGGAACACGTATACTAATTGAGATCTGATTTGCGTAATTCTACTTTTTGGACAGGATATGCGGCATTTCCCTCGGATTCAAGTTCGACTTAAAATTCAGCCAAAGGAATCTAATGGTGGAAAGATTTTAACCTTGAACATTAGATTGGAAGATGCAAATACTCAGCGAAGAACAGCAAAAGCTTTTATCCCACGATATCCAAAGGTATTTTCATCTGCTAGTTTTGTAATCTGGAGCAAGTCAAACACTTGACATTTTGCTCTTTTCAGGTAAAAGATGAAGCTTGGTGGTTAGTCCTTTGTAATACTTCCGCAAGTGAACTGTATGCTCTGAAGAGAGTGTCTTTCTCTGGTCGTTTGCAGACACACATGGATTTGCCATCCACTCTGACCAATTTCCAGGTTGATATCTGATGATATTGTATATACATATACTTATTTGGTATTAAACTTAACCTGACATTTTTTTGTACACCAGTTAGCTGGTGTTTCCCCCTCTTCTAGATGAATCAGTGTCCCAGTAGCAGTCATTTTCTTTTTATGATGGTCTCTGAGAAATTAAACACCTACTCTCCCCCAGCACACACACACAAACAAACAAAATTAAATTAAAAATAGAAGTTAATAACAGATCAGCTTTTAGAAGATAGAGTATGACATATTTGTCTTCTTATCTTGGAGTCAAGATTCAGTCCTCCCAGCTACCCACCCACTCCAGGAAGGGGAAAAAAACATGTTTTCATTCTGTGCATGTAAAAGATGTTACACCTTCTATGTTGGGACTGAAAAGTTGAGATGTTTCTATTTCAGGGGATAAAGCTCATTCTAGTATCGGATTCTTACATTGGGTTTGAACAAGAACACTCTATTGAAGGATTGACTTAATCTGGAAGAAACTATACCAACTCCAGATTGTAATGCAATGCTCCCAAAATCAGGATTTGACTTTGTATAGCACAAAGGCTCACTTTTTCACAATCAGTTATAGAAGTTGTGTTACGGTCTACATTTGTAATGAGATATTGCTTTGTAATTTTCTTGAGTAATTGATCGGCATCCTTCATTTTTCTTTGTCATGTAGATCCAATTGTATATATGCATCAGGGTACTGTTGAAAGTCTTATACACACACCCTAATCAATATAGAGCTTTCCATTCAATGTCCA</genome_strand>
        <mrna_strand>TGAAAGTAGCCTGAGAGAGCAACTTCATGACCACATCAACGCTGAGATTGTTACTGGAACAATCTCTCATAAAGAGGACGCTATGCATTATCTCACTTGGACCTACTTGTTTCGTAGATTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTTAACCCAGCTTACTATGGCCTAGAGCATGCAGAACCTGGGATTCTAAATTCTTATTTGTCTAG..............................................................................CTTGGTGCAAAGCACATTTGAGGATCTTGAAGACTCTGGATGCATCAAGGTTACCGAGGACAGTGTTGAACCACTGATGTTGGGCTCAATAGCATCTCAGTATTATCTGAAGTACACCACTGTATCAATGTTTGGCTCAAAAATAGGATCTGATACATCACTTGAG......................................................................................................GTTTTCCTACAAATACTGTCTGGTGCTTCTGAATATGATGAGCTCCCGGTGAGGCATAATGAG.............................................................................................................................................................................................................................................................................................................................................................GAAAACTACAATGAAAAATTAGCTGAGAAAGTTCCATATGCTGTCGACCACAATCGCCTGGATGATCCTCATGTGAAAGCAAATCTGCTCTTTCAG..........................................................................................................................................................................................................................................................................GCTCATTTTTCCCAATCAGAGTTGCCAATCAGCGATTATGTCACAGACTTAAAGTCTGTGCTGGATCAAAGTATACGTGTTATCCAGGCTATGATAGATATTTGTGCCAACAGTGGATGGCTCTCAAGTACCATTACCTGTATGCATCTGTTGCAAATGGTCATGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTTGTGGTTTGATAGAGACTCTCCTCTTTGGATGTTACCATGCATGACTGATGATCTACTCAACTCATTGCAAAAAAAAGGAATTGCTAGTATCCAGCAGCTGTTGGATTGCCCTTCAGAATCATTACGGGCTATCACTGGAAGTTCAGCTGCCTCGAAACTGTATCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATGCGGCATTTCCCTCGGATTCAAGTTCGACTTAAAATTCAGCCAAAGGAATCTAATGGTGGAAAGATTTTAACCTTGAACATTAGATTGGAAGATGCAAATACTCAGCGAAGAACAGCAAAAGCTTTTATCCCACGATATCCAAAG.................................................................GTAAAAGATGAAGCTTGGTGGTTAGTCCTTTGTAATACTTCCGCAAGTGAACTGTATGCTCTGAAGAGAGTGTCTTTCTCTGGTCGTTTGCAGACACACATGGATTTGCCATCCACTCTGACCAATTTCCAG........................................................................................................................................................................................................................................................................................................................................................................................................................GGGATAAAGCTCATTCTAGTATCGGATTCTTACATTGGGTTTGAACAAGAACACTCTATTGAAGGATTGACTTAATCTGGAAGAAACTATACCAACTCCAGATTGTAATGCAATGCTCCCAAAATCAGGATTTGACTTTGTATAGCACAAAGGCTCACTTTTTCACAATCAGTTATAGAAGTTGTGTTACGGTCTACATTTGTAATGAGATATTGCTTTGTAATTTTCTTGAGTAATTGATCGGCATCCTTCATTTTTCTTTGTCATGTAGATCCAATTGTATATATGCATCAGGGTACTGTTGAAAGTCTTATACACACACCCTAATCAATATAGAGCTTTCCATTCAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0062L07-MA9aD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U319191" ref_strand="+" ref_description="SGN-U319191        Tomato 200607 #1 [14 ESTs aligned] arabidopsis/peptide: | Symbol: None | transmembrane protein, putative, similar to GB:AAB61079; contains weak similarity to the SAPB protein (TR:E236624) (Arabidopsis thaliana); similar to seven transmembrane domain orphan receptor (GI:4321619) (Mus musculus) contains 7 transmembrane domains; | chr3:1389455-1391681 FORWARD | Aliases: T9J14.4, T9J14_4(evalue: 9e-99, score=357) genbank/nr: gi|18397089|ref|NP_566244.1| expressed protein [Arabidopsis thaliana] gi|15028251|gb|AAK76714.1| unknown protein [Arabidopsis thaliana](evalue: 7e-97, score=357)">
      <seq>gcaacttctccttcgaagttcgatctaccctcctccgattgcttccatttcacgtcggacctagggttccgatgatctcatccacaagttttcaatgcctttgattttctattctgcgaagaatgacaaattttagtggagcattttccattactgaagcttcatctcccaccgaagcaggtccggcccgaaccggaaccggaactgccggtagagatgacttcatattccggttgtccagctcagcaactgcgtgccatgggttctggcacgatgtgatactggtattaccatcggttttgttcgtactgtacttagggtttcatgctaggagcaacattaagaagctcagtcatcgtcggtcttttgtaatgattggatactatggacttttgtggtttgctgttcttttaaacctttgttggtgctttcttcaggcatggcagtgcactccagggaagcaggtggcttggaatcttttatcgttgtttgcaacgtctgcaatgctatttctggagattagcatagtggcattcttacttaaggagaattatgcgagctgtttggaaactttatcacgtactttcatggtttcaggcctttttgttggcgtggatttactattaaaggcaatttatatatttggacttggtattccacttttccttgacatggaaatagctgatagggggaagtggcgtgtctggagcaccaacaagcttcttcttactgcagcttatggctacatattgtttgtgcatttctcaaagtggagagataagctgcctccacgtccagccttttacaattacgtcatcgtcatgtttgtgacaagtgctgtaatgttatttgcctgtgggcttgcaggcattaggggtggctttggactttggttgtataatttgactgtagtttgttatcactcgctttatcttccatttctttacgtgacgttcctggctgattttttcaaggaggaagattggcttctggacagcgcatattactcagagatgaaagatgcagggttttttgatgcagacggggagtaagcttgtaaaactgtagacaaataagcagtcccaacatgtaattgtaaatattgactggctggtattatgagaaacaaaactaatagttattcaagtgattgcattgtctagcttatttgctggttgagatcattgatccacttggcaaaagtataagaaagaacaactaaaatgttattgtaaagatatgtatttttgaatagaccatgctggctaaatatttgggttgaaaaaaaaaaaaaaaaaaaactcgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0062L07-MA9aD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0062L07.1" temp_strand="-" temp_description="C06SLm0062L07.1  AC219223.1 htgs_phase:3 submitted_to_sgn_as:C06SLm0062L07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="46442" stop="41462"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46142" g_stop="45706" g_length="437"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="437" r_length="437" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45705" i_stop="44292" i_length="1414">
            <donor d_prob="0.739" d_score="1.00"/>
            <acceptor a_prob="0.604" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44291" g_stop="44100" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="629" r_length="192" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="44099" i_stop="42686" i_length="1414">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.937" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42685" g_stop="42526" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="630" r_stop="789" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42525" i_stop="42427" i_length="99">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.438" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42426" g_stop="42324" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="790" r_stop="892" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="42323" i_stop="42230" i_length="94">
            <donor d_prob="0.088" d_score="1.00"/>
            <acceptor a_prob="0.695" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="42229" g_stop="42148" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="893" r_stop="974" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="42147" i_stop="42075" i_length="73">
            <donor d_prob="0.926" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="42074" g_stop="41766" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="975" r_stop="1283" r_length="309" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1284" polyA_stop="1302"/>
      <MATCH_line gen_id="C06SLm0062L07.1" gen_strand="-" ref_id="SGN-U319191" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1283</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0062L07.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U319191" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46142" e_stop="45706"/>
          <exon e_start="44291" e_stop="44100"/>
          <exon e_start="42685" e_stop="42526"/>
          <exon e_start="42426" e_stop="42324"/>
          <exon e_start="42229" e_stop="42148"/>
          <exon e_start="42074" e_stop="41766"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAACTTCTCCTTCGAAGTTCGATCTACCCTCCTCCGATTGCTTCCATTTCACGTCGGACCTAGGGTTCCGATGATCTCATCCACAAGTTTTCAATGCCTTTGATTTTCTATTCTGCGAAGAATGACAAATTTTAGTGGAGCATTTTCCATTACTGAAGCTTCATCTCCCACCGAAGCAGGTCCGGCCCGAACCGGAACCGGAACTGCCGGTAGAGATGACTTCATATTCCGGTTGTCCAGCTCAGCAACTGCGTGCCATGGGTTCTGGCACGATGTGATACTGGTATTACCATCGGTTTTGTTCGTACTGTACTTAGGGTTTCATGCTAGGAGCAACATTAAGAAGCTCAGTCATCGTCGGTCTTTTGTAATGATTGGATACTATGGACTTTTGTGGTTTGCTGTTCTTTTAAACCTTTGTTGGTGCTTTCTTCAGGTACTTATGACATTAGCTCGACGGTATTTATTTCCATGTTATATTACACTTGATAATTCATTCACTTCTTAGATATTTCATGATTTGTGTGGTAGTATTTGTATGTAGTTTCCAGATATGTGAATCTTATTTTCCTAAAAAAGAGAGGCAAATTTATGTTGGAATTGAGATCCTTCTCTTAAGGCAATATTGTGAAAGTTGACATTGGTTGTCCTGCTGGAGCTATTAAGGAGAGCTGATGGAGAGGAGTTCTCCTTAAGCTGGGGGTCGCTGGCTCTAGTTATTGGTTGGCAGAGGGTGCTTGGAATGATTGGGTATTTCAAAATTTAAAAGGAAGAAGATTTTCTTTTTTGATTACCAAACTCAAGCTACGTCGTGATTGTTACTATTTTGGGTAAGCTAAACATGGTTGTAACCTGACATATCTAATCGATTCTCATCCCAAAATAATGAGAAGTATTGAGGATTTGACTCTGGTTTCTGACTCATCAACTCATGTTGGTGCTACGACTTCCCCACTCAAGGGTGGGGCGTAGCAGTTGATGGATTTGGAAAGAAGACCATGGTTTATCAGGCTTCCAATCCCAGTCAAGGCATTAAAGTTCCATTAGGGTGGGAAGAGTTTCTAGGTAGATGTATTGGCGGAAGGATGCAAATACGTGGTGAAATAGTTAAGGTCCACTCTTATAGAAGAAAATGGTGCTATTGACTAGCTAATAGAGTATTATTTGCATTGTCTTTGAGATAGAGTTGAAAGGATAATTAGAGAATACGTATATCTAAAAAATCATGGTGATCGAACCCTAACTTAATCTAACCTTCGTGTTGTCTTTGTACTCCCTCTGTCCGGATTTATATGACATACTTCCCTTTTTAGTCTATCCCTAAAGAATGACCTATTTCCTTGTCAAACATTTAATGACACTATCAATAATTTACCCATGTTGGGTTCCACTATTTAAAAATTCATTTATTTTATGGTTAGTTTTGGAACATTGCAAAGTCTTCCCCTATTTTGTAAATTCTATGCCCGGTCAAACTACACCACATAAATTGGGTTCGAAGGAGTAATAAAAGACTCAAATCCAATATAGATTCTCTGATTAGCATCATATGTTTCTGTAGTCATGATTTTTGAAATTATGGTACTGTCCTTAAACAAAATCCAGCAGAAAGAGAATTGTGCTTGATTAGTGTGGTCAATCTTTTCCTCGGTCTCTATGTTATGGAATGTGATTGAATGATTGTCATTTCATGGGTGGCTTGTATCAGAATTTGGAACGCATCTTACCTTCTGTATCAATGCTGTTATGATCTACGTTTTCCTAATATTATCGAAGTCGTAAACCATTATGGTTATGTACTTCTGTTCCTTGAAATGCTATTGCATCATCTTTCCAAATTTGCAAAGCAGGCATGGCAGTGCACTCCAGGGAAGCAGGTGGCTTGGAATCTTTTATCGTTGTTTGCAACGTCTGCAATGCTATTTCTGGAGATTAGCATAGTGGCATTCTTACTTAAGGAGAATTATGCGAGCTGTTTGGAAACTTTATCACGTACTTTCATGGTTTCAGGCCTTTTTGTTGGCGTGGATTTACTATTAAAGGTGAAGATTTCTTCATCTTGTTTCTTACTGTCTTTTGACTAATAAAGCAGTTTACTTAAACACTAACAAATTGCACGCAGTTACAGAGAACCTGTTATCCATCCAGGGCATAAACTATATCACAAAATTGCCCCCCTGTTCAACCAATTTAAGGAATCCATTAAACTTAGTTTGCCTATAACTGAAGTCTACAGGAAAGAAACACAGAGTATTCAGCACCAGAAATGTGGTTGGATTTGTTAAGTGTGTATTTTTCGGGTAAAACTTTGGCACAGAAGTCTATTTGTTCTCATTTCATATATTCACTGTCTTGAACCATGTTCTCCTTTCTTCTACGTGTGCAGCACCTACAACTGAATTTCTATGACTTTTCCTTTTGTACTTAAGCTTAGATGAAGCAAGTAATGAGTTTGATATTTGACTCAGTTTGCTTGAGCTGATTTTTTATTCAAGGTTCTGCACTGGCTGGAGAAATAGTGTAGTTCTGCATCAGCTGCCACTCTTGTTTTCATCTTTTAAGCTTAATTGAAAATAATGTGGAAACTCTCACAGTATTGGGTGTTGTAGTTTCCAGCTTTAAGTGAGAAGGCCAATTAAATAATACATGCTAAACACACATTCAAGGAGAAGGCGATTGTAGTTTAGAGAGAAGAATTTTGACTCTGCTGTTCTTGTGTATCTTTTATAACGTGATTGATTGGTTTGAGTTTTTTTTACTTGCTACCAGGATAGACATAGGATCAAGATCATGTGCTTTTGCAAGCCATGCTAAATCTGTAGTTGCATTTCATTGGAAACCTTTGGTGCTCTAAAGAGATATTAAAATTATTTATCTCAATGTGATGTGTAATAACTCTTTGTTCAATTCCTCTGAATTTGAGGAAGGCCCTGTTCTGTTAGTTGCTGTAGAAGCTCCTCTTGTAACAAGAGAAATCAGTCTTACAACATAAGTGGCTCTTTATCCTATGAGTAGTCACATCCATCCAGGGACACAGTATTTTTTTAGTTCATCATGATTGACGAAGGTTGGATACAGTACTTCCAGACTGTTGTGCTTTTGGGACATGGATCATGCTAGTTAAACTTACCGTACTAAATAACGCAGTTGCGAGAGAGAAAGGGTGAGACAAGTAACTCATGCGTGCCTGGCTTGGAAATTTGTCCAGATAACTTGGTATATTGTTTTCTAATAATCACTTGGGTATGTTACCTAACCTGCAAAGGTGGAAACAAACAAGTACTATCCAAAAGATGTTCGAGATAGTTCTTCAATTTTACTTAGTTACTGTTTTATGCCCCAGAGTTGTTGCTACTTACGACCAAATAAAGGGTAACCAATTAATTGTAGAGAGCTTATTTCTGATTTCTTTATATGGAAACACTTATGTGCCTTCCCGTCTATTCATTTGATCAGGCAATTTATATATTTGGACTTGGTATTCCACTTTTCCTTGACATGGAAATAGCTGATAGGGGGAAGTGGCGTGTCTGGAGCACCAACAAGCTTCTTCTTACTGCAGCTTATGGCTACATATTGTTTGTGCATTTCTCAAAGTGGAGAGATAAGCTGCCTCGTAAGTTTGATTTTTTATTTTCCCTACTTGACCACTTCCATTTTCCTGGTCCATCTCTTCGTATTAGGTCTAACATACAGTGTTTTCCATTATATGCAGCACGTCCAGCCTTTTACAATTACGTCATCGTCATGTTTGTGACAAGTGCTGTAATGTTATTTGCCTGTGGGCTTGCAGGCATTAGGGGTGGCTTTGGACTTTGGTATAGACAAGTTTGCTTCCGTTACTATTACTCTTCCAAAATCAATAGTGTCTTTTCAACTCAATTGACATATGGGAATCGTTCAACTTTGCAGGTTGTATAATTTGACTGTAGTTTGTTATCACTCGCTTTATCTTCCATTTCTTTACGTGACGTTCCTGGCTGATTTTTTCAAGGTAATCTACCCAGACTAGTTATTTGTTGGTCAGAAATGCAAGCATTCTCTTATTTCTTTCCTTACAACTGCAGGAGGAAGATTGGCTTCTGGACAGCGCATATTACTCAGAGATGAAAGATGCAGGGTTTTTTGATGCAGACGGGGAGTAAGCTTGTAAAACTGTAGACAAATAAGCAGTCCCAACATGTAATTGTAAATATTGACTGGCTGGTATTATGAGAAACAAAACTAATAGTTATTCAAGTGATTGCATTGTCTAGCTTATTTGCTGGTTGAGATCATTGATCCACTTGGCAAAAGTATAAGAAAGAACAACTAAAATGTTATTGTAAAGATATGTATTTTTGAATAGACCATGCTGGCTAAATATTTGGGTTGAA</genome_strand>
        <mrna_strand>GCAACTTCTCCTTCGAAGTTCGATCTACCCTCCTCCGATTGCTTCCATTTCACGTCGGACCTAGGGTTCCGATGATCTCATCCACAAGTTTTCAATGCCTTTGATTTTCTATTCTGCGAAGAATGACAAATTTTAGTGGAGCATTTTCCATTACTGAAGCTTCATCTCCCACCGAAGCAGGTCCGGCCCGAACCGGAACCGGAACTGCCGGTAGAGATGACTTCATATTCCGGTTGTCCAGCTCAGCAACTGCGTGCCATGGGTTCTGGCACGATGTGATACTGGTATTACCATCGGTTTTGTTCGTACTGTACTTAGGGTTTCATGCTAGGAGCAACATTAAGAAGCTCAGTCATCGTCGGTCTTTTGTAATGATTGGATACTATGGACTTTTGTGGTTTGCTGTTCTTTTAAACCTTTGTTGGTGCTTTCTTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGGCAGTGCACTCCAGGGAAGCAGGTGGCTTGGAATCTTTTATCGTTGTTTGCAACGTCTGCAATGCTATTTCTGGAGATTAGCATAGTGGCATTCTTACTTAAGGAGAATTATGCGAGCTGTTTGGAAACTTTATCACGTACTTTCATGGTTTCAGGCCTTTTTGTTGGCGTGGATTTACTATTAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATTTATATATTTGGACTTGGTATTCCACTTTTCCTTGACATGGAAATAGCTGATAGGGGGAAGTGGCGTGTCTGGAGCACCAACAAGCTTCTTCTTACTGCAGCTTATGGCTACATATTGTTTGTGCATTTCTCAAAGTGGAGAGATAAGCTGCCTC...................................................................................................CACGTCCAGCCTTTTACAATTACGTCATCGTCATGTTTGTGACAAGTGCTGTAATGTTATTTGCCTGTGGGCTTGCAGGCATTAGGGGTGGCTTTGGACTTTG..............................................................................................GTTGTATAATTTGACTGTAGTTTGTTATCACTCGCTTTATCTTCCATTTCTTTACGTGACGTTCCTGGCTGATTTTTTCAAG.........................................................................GAGGAAGATTGGCTTCTGGACAGCGCATATTACTCAGAGATGAAAGATGCAGGGTTTTTTGATGCAGACGGGGAGTAAGCTTGTAAAACTGTAGACAAATAAGCAGTCCCAACATGTAATTGTAAATATTGACTGGCTGGTATTATGAGAAACAAAACTAATAGTTATTCAAGTGATTGCATTGTCTAGCTTATTTGCTGGTTGAGATCATTGATCCACTTGGCAAAAGTATAAGAAAGAACAACTAAAATGTTATTGTAAAGATATGTATTTTTGAATAGACCATGCTGGCTAAATATTTGGGTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0062L07-MA9aD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U325209" ref_strand="+" ref_description="SGN-U325209        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr5:2533758-2540422 FORWARD | Aliases: F13G24.140(evalue: 8e-09, score=58.5) genbank/nr: gi|15241462|ref|NP_196411.1| expressed protein [Arabidopsis thaliana] gi|10176728|dbj|BAB09958.1| gene_id:MXM12.18~unknown protein [Arabidopsis thaliana](evalue: 6e-07, score=58.5)">
      <seq>tcacattcacctaataaagctgcggaatctagtccaaacatgctacagcttattcagaaggtggaccagtcgagagagtgtggttccggggcagagttaggtcattctgaaaaaaaagcatcatctaggatgcctgaagcagcagagaattctgatgagtctgttggtcatcacctgaggagtcagtctgctttctctcaaggctatggtctacaacttggccctccatcccgacgtgcatcagtccgaacccattctttgacatctcagcgcccgatccaagcttttagctcttcacattatagtcatgctactgttgacactggtgagaagaatcaaggaccaatgcacccccctcatcaggctccatccgtactttcaccttctgatccatcccaggaaggattgaagaatataggatttggtattgcaggaagtaccaataatgtaacttctatgtatgcaatgcccggaaacctttctccagcgtttgattctcattctggttttccctataggggaggtcagcttaaaattccaaatgtggctaggactactgcacaactcccaacaaatcaatccttgagtgtatcctttgataagcatgcttcctctcatacagagaaaggtgactcttgcagaggatctgcaaatggtcagtctgtggaggcttccttgctggctggggctgacaagttgcaagataagcctattctctccgcagacaagtctcaattgagtaacaccaatcgtacagtggaaagtatctttaccaatcaagttacatcccaagagccagtatcagtttctcaggcgttagtgtctggcatcggtcagcagggtacgtattcaaaaatgtcatccggtatatggggtacttttccaccacctcagcaagcttttggctttcagtatagcaaggattcttctcatattttccaatcacatcaaatgaatattgtggagtcgtcattatctgctcctgggaggcaaagtgatcaatacttgaatagaggtagttttgcatcccagattggtactagctcagtgaattccctggtttcttctgaaggggaagaacagcgaccaaaggaaagtcattctcagcaaatatcagtgacaaatgttgaccacatccagaagatgaatgattcacagggtagagaaccttttatcaagtatatcttgggaggatctgctgcaaatgctgcatctatgcagagagatattgaagcctttggccgaactttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0062L07-MA9aD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0062L07.1" temp_strand="+" temp_description="C06SLm0062L07.1  AC219223.1 htgs_phase:3 submitted_to_sgn_as:C06SLm0062L07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61542" stop="63593"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61842" g_stop="61873" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61874" i_stop="62074" i_length="201">
            <donor d_prob="0.916" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62075" g_stop="63293" g_length="1219"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="1251" r_length="1219" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0062L07.1" gen_strand="+" ref_id="SGN-U325209" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1251</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0062L07.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U325209" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61842" e_stop="61873"/>
          <exon e_start="62075" e_stop="63293"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACATTCACCTAATAAAGCTGCGGAATCTAGGTAGTTAATTTGCTGATTCTCAGAACTATTAGCAATGGTTATGGATACATTTTGATAGATCCTGTACGATTTAGATGTTCTTTTGTACGTATCTTTACATGTGTATTAAAACCTTGTTGACGGTCAAGTTGAGCTGTATAAACTACTTTGCGGTGCCTTCTCTTTCTGGCTTCAATGTTTAAACTGTTTCTATTCTTGCAGTCCAAACATGCTACAGCTTATTCAGAAGGTGGACCAGTCGAGAGAGTGTGGTTCCGGGGCAGAGTTAGGTCATTCTGAAAAAAAAGCATCATCTAGGATGCCTGAAGCAGCAGAGAATTCTGATGAGTCTGTTGGTCATCACCTGAGGAGTCAGTCTGCTTTCTCTCAAGGCTATGGTCTACAACTTGGCCCTCCATCCCGACGTGCATCAGTCCGAACCCATTCTTTGACATCTCAGCGCCCGATCCAAGCTTTTAGCTCTTCACATTATAGTCATGCTACTGTTGACACTGGTGAGAAGAATCAAGGACCAATGCACCCCCCTCATCAGGCTCCATCCGTACTTTCACCTTCTGATCCATCCCAGGAAGGATTGAAGAATATAGGATTTGGTATTGCAGGAAGTACCAATAATGTAACTTCTATGTATGCAATGCCCGGAAACCTTTCTCCAGCGTTTGATTCTCATTCTGGTTTTCCCTATAGGGGAGGTCAGCTTAAAATTCCAAATGTGGCTAGGACTACTGCACAACTCCCAACAAATCAATCCTTGAGTGTATCCTTTGATAAGCATGCTTCCTCTCATACAGAGAAAGGTGACTCTTGCAGAGGATCTGCAAATGGTCAGTCTGTGGAGGCTTCCTTGCTGGCTGGGGCTGACAAGTTGCAAGATAAGCCTATTCTCTCCGCAGACAAGTCTCAATTGAGTAACACCAATCGTACAGTGGAAAGTATCTTTACCAATCAAGTTACATCCCAAGAGCCAGTATCAGTTTCTCAGGCGTTAGTGTCTGGCATCGGTCAGCAGGGTACGTATTCAAAAATGTCATCCGGTATATGGGGTACTTTTCCACCACCTCAGCAAGCTTTTGGCTCTCAGTATAGCAAGGATTCTTCTCATATTTTCCAATCACATCAAATGAATATTGTGGAGTCGTCATTATCTGCTCCTGGGAGGCAAAGTGATCAATACTTGAATAGAGGTAGTTTTGCATCCCAGATTGGTACTAGCTCAGTGAATTCCCTGGTTTCTTCTGAAGGGGAAGAACAGCGACCAAAGGAAAGTCATTCTCAGCAAATATCAGTGACAAATGTTGACCACATCCAGAAGATGAATGATTCACAGGGTAGAGAACCTTTTATCAAGTATATCTTGGGAGGATCTGCTGCAAATGCTGCATCTATGCAGAGAGATATTGAAGCCTTTGGCCGAACTTTG</genome_strand>
        <mrna_strand>TCACATTCACCTAATAAAGCTGCGGAATCTAG.........................................................................................................................................................................................................TCCAAACATGCTACAGCTTATTCAGAAGGTGGACCAGTCGAGAGAGTGTGGTTCCGGGGCAGAGTTAGGTCATTCTGAAAAAAAAGCATCATCTAGGATGCCTGAAGCAGCAGAGAATTCTGATGAGTCTGTTGGTCATCACCTGAGGAGTCAGTCTGCTTTCTCTCAAGGCTATGGTCTACAACTTGGCCCTCCATCCCGACGTGCATCAGTCCGAACCCATTCTTTGACATCTCAGCGCCCGATCCAAGCTTTTAGCTCTTCACATTATAGTCATGCTACTGTTGACACTGGTGAGAAGAATCAAGGACCAATGCACCCCCCTCATCAGGCTCCATCCGTACTTTCACCTTCTGATCCATCCCAGGAAGGATTGAAGAATATAGGATTTGGTATTGCAGGAAGTACCAATAATGTAACTTCTATGTATGCAATGCCCGGAAACCTTTCTCCAGCGTTTGATTCTCATTCTGGTTTTCCCTATAGGGGAGGTCAGCTTAAAATTCCAAATGTGGCTAGGACTACTGCACAACTCCCAACAAATCAATCCTTGAGTGTATCCTTTGATAAGCATGCTTCCTCTCATACAGAGAAAGGTGACTCTTGCAGAGGATCTGCAAATGGTCAGTCTGTGGAGGCTTCCTTGCTGGCTGGGGCTGACAAGTTGCAAGATAAGCCTATTCTCTCCGCAGACAAGTCTCAATTGAGTAACACCAATCGTACAGTGGAAAGTATCTTTACCAATCAAGTTACATCCCAAGAGCCAGTATCAGTTTCTCAGGCGTTAGTGTCTGGCATCGGTCAGCAGGGTACGTATTCAAAAATGTCATCCGGTATATGGGGTACTTTTCCACCACCTCAGCAAGCTTTTGGCTTTCAGTATAGCAAGGATTCTTCTCATATTTTCCAATCACATCAAATGAATATTGTGGAGTCGTCATTATCTGCTCCTGGGAGGCAAAGTGATCAATACTTGAATAGAGGTAGTTTTGCATCCCAGATTGGTACTAGCTCAGTGAATTCCCTGGTTTCTTCTGAAGGGGAAGAACAGCGACCAAAGGAAAGTCATTCTCAGCAAATATCAGTGACAAATGTTGACCACATCCAGAAGATGAATGATTCACAGGGTAGAGAACCTTTTATCAAGTATATCTTGGGAGGATCTGCTGCAAATGCTGCATCTATGCAGAGAGATATTGAAGCCTTTGGCCGAACTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0062L07-MA9aD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U338170" ref_strand="+" ref_description="SGN-U338170        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: hypothetical(evalue: 2e-06, score=56.2)">
      <seq>tttaccaatcaagttacatcccaagagccagtatcagtttctcaggcgttagtgtctggcatcggtcagcagggtacgtattcaaaaatgtcatccggtatatggggtacttttccaccacctcagcaagcttttggctctcagtatagcaaggattcttctcatattttccaatcacatcaaatgaatattgtggagtcgtcattatctgctcctgggaggcaaagtgatcaatacttgaatagaggtagttttgcatcccagattggtactagctcagtgaattccctggtttcttctgaaggggaagaacagcgaccaaaggaaagtcattctcagcaaatatcagtgacaaatgttgaccacatccagaagatgaatgattcacagggtagagaaccttttatcaagtatatcttgggaggatctgctgcaaatgctgcatctatgcagagagatattgaagcctttggccgaactttgaagcccaacctttcaaatcagaactattccctattaaaccaagtgcaggctatcaaacatgtggaggtcgatccaagcaatagggacttcaagagaatgaaagtagcagacagcagtacaggtgctccacaattttcttctggggacactgaaatgttgggagtctctgtgccagaggatttgcaaagaagcatttcatctcaacaagggagaaaaatgtctcctcatgatgtact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0062L07-MA9aD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0062L07.1" temp_strand="+" temp_description="C06SLm0062L07.1  AC219223.1 htgs_phase:3 submitted_to_sgn_as:C06SLm0062L07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="62511" stop="63829"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62811" g_stop="63529" g_length="719"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="719" r_length="719" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0062L07.1" gen_strand="+" ref_id="SGN-U338170" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>719</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0062L07.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U338170" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62811" e_stop="63529"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTACCAATCAAGTTACATCCCAAGAGCCAGTATCAGTTTCTCAGGCGTTAGTGTCTGGCATCGGTCAGCAGGGTACGTATTCAAAAATGTCATCCGGTATATGGGGTACTTTTCCACCACCTCAGCAAGCTTTTGGCTCTCAGTATAGCAAGGATTCTTCTCATATTTTCCAATCACATCAAATGAATATTGTGGAGTCGTCATTATCTGCTCCTGGGAGGCAAAGTGATCAATACTTGAATAGAGGTAGTTTTGCATCCCAGATTGGTACTAGCTCAGTGAATTCCCTGGTTTCTTCTGAAGGGGAAGAACAGCGACCAAAGGAAAGTCATTCTCAGCAAATATCAGTGACAAATGTTGACCACATCCAGAAGATGAATGATTCACAGGGTAGAGAACCTTTTATCAAGTATATCTTGGGAGGATCTGCTGCAAATGCTGCATCTATGCAGAGAGATATTGAAGCCTTTGGCCGAACTTTGAAGCCCAACCTTTCAAATCAGAACTATTCCCTATTAAACCAAGTGCAGGCTATCAAACATGTGGAGGTCGATCCAAGCAATAGGGACTTCAAGAGAATGAAAGTAGCAGACAGCAGTACAGGTGCTCCACAATTTTCTTCTGGGGACACTGAAATGTTGGGAGTCTCTGTGCCAGAGGATTTGCAAAGAAGCATTTCATCTCAACAAGGGAGAAAAATGTCTCCTCATGATGTACT</genome_strand>
        <mrna_strand>TTTACCAATCAAGTTACATCCCAAGAGCCAGTATCAGTTTCTCAGGCGTTAGTGTCTGGCATCGGTCAGCAGGGTACGTATTCAAAAATGTCATCCGGTATATGGGGTACTTTTCCACCACCTCAGCAAGCTTTTGGCTCTCAGTATAGCAAGGATTCTTCTCATATTTTCCAATCACATCAAATGAATATTGTGGAGTCGTCATTATCTGCTCCTGGGAGGCAAAGTGATCAATACTTGAATAGAGGTAGTTTTGCATCCCAGATTGGTACTAGCTCAGTGAATTCCCTGGTTTCTTCTGAAGGGGAAGAACAGCGACCAAAGGAAAGTCATTCTCAGCAAATATCAGTGACAAATGTTGACCACATCCAGAAGATGAATGATTCACAGGGTAGAGAACCTTTTATCAAGTATATCTTGGGAGGATCTGCTGCAAATGCTGCATCTATGCAGAGAGATATTGAAGCCTTTGGCCGAACTTTGAAGCCCAACCTTTCAAATCAGAACTATTCCCTATTAAACCAAGTGCAGGCTATCAAACATGTGGAGGTCGATCCAAGCAATAGGGACTTCAAGAGAATGAAAGTAGCAGACAGCAGTACAGGTGCTCCACAATTTTCTTCTGGGGACACTGAAATGTTGGGAGTCTCTGTGCCAGAGGATTTGCAAAGAAGCATTTCATCTCAACAAGGGAGAAAAATGTCTCCTCATGATGTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0062L07-MA9aD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U331862" ref_strand="+" ref_description="SGN-U331862        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | dentin sialophosphoprotein-related, contains weak similarity to Swiss-Prot:Q9NZW4 dentin sialophosphoprotein precursor (Homo sapiens) | chr5:2549433-2554670 REVERSE | Aliases: F13G24.2(evalue: 3e-32, score=135) genbank/nr: gi|15241481|ref|NP_196415.1| expressed protein [Arabidopsis thaliana] gi|11357396|pir||T45623 hypothetical protein F13G24.180 - Arabidopsis thaliana gi|6562312|emb|CAB62610.1| putative protein [Arabidopsis thaliana] gi|10176732|dbj|BAB09962.1| gene_id:MXM12.22~unknown protein [Arabidopsis thaliana](evalue: 2e-30, score=135)">
      <seq>ctagagctgctaatagacttactgaaaaggttatagaagacattggttttaatgaggaaggggccccaggggttaaagctaaaagaagggctatattgaccactcagcttatgcagcaactactcccctctccccctgcagcaattctttctgcagaagctaattcagagtatgagagtgtgggttactccatctctagatcgtcattgggggatgcatgtagcatgctttcttgctcaaatgctgatcgtaatatgccttgtgatgacaaagaactgcttcccaaagggtgcattacttctcagaggattaataaacatgattttgccaaaacattggaagagttacagggaagagcgaggagattggaaagtgattttatgagactggacaagagagcatcggtattagatgtgacagtggatgggcaagaccaagagaagttcggcgttattaatcggtatgctaggtttcttggtcgggcgcaatatgatggtattcctcagagatacgtcacagcgcttccaataccaaaagatctgcctagtggggtgcactgtctttctctataatcacaaatcaattgaatcttttctgtgctctgtcatcaattacctcaacttcccgtagacatttttgtcctagtcatgtactagttctagcaagagcaaaatagaaccacacaatcagtattgctgaacatactcaattgtcatctcagatggaacgtagctgtccaatcttttgcatgtaggccatttatgtcattatcaagaaaatatacatgtacatctcttcaaacttagtgaggggaggtgaaactagggtgccccatcattttttgccagaagtggggagagaatacatacttctgtgcttttaagctgttgacatacagttggccatcattatgtataagagatgcccaggcgctcataattaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0062L07-MA9aD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0062L07.1" temp_strand="+" temp_description="C06SLm0062L07.1  AC219223.1 htgs_phase:3 submitted_to_sgn_as:C06SLm0062L07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63866" stop="68386"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64166" g_stop="64194" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="29" r_length="29" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64195" i_stop="64274" i_length="80">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64275" g_stop="64522" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="277" r_length="248" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64523" i_stop="64609" i_length="87">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64610" g_stop="64717" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="385" r_length="108" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="64718" i_stop="67528" i_length="2811">
            <donor d_prob="0.977" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67529" g_stop="68085" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="942" r_length="557" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0062L07.1" gen_strand="+" ref_id="SGN-U331862" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>942</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0062L07.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U331862" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64166" e_stop="64194"/>
          <exon e_start="64275" e_stop="64522"/>
          <exon e_start="64610" e_stop="64717"/>
          <exon e_start="67529" e_stop="68085"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGAGCTGCTAATAGGCTTACTGAAAAGGTATAATGAACTGACTGCTATAATCCTCCTGATTTCATTATTAGTTGCCTTACTTTTAACAGCCTGTACTTCTCTCTTAGGTTATAGAAGGCATTGGTTTTAATGAGGAAGGGGCCCCAGGGGTTAAAGCTAAAAGAAGGGCTATATTGACCACTCAGCTTATGCAGCAACTACTCCCCTCTCCCCCTGCAGCAATTCTTTCTGCAGAAGCTAATTCAGAGTATGAGAGTGTGGGTTACTCCATCTCTAGATCGTCATTGGGGGATGCATGCAGCATGCTTTCTTGCTCAAATGCTGATCGTAATATGCCTTGTGATGACAAAGAACTGTGAGTTCTCTAGTTGCATGAGATTATTCAACTGTCTTTTGTTTTTTTGTTCTTCTGATCCTAATGATACATTTAATGCAATTGTAGGCTTCCCAAAGGGTGCATTACTTCTCAGAGGATTAATAAACATGATTTTGCCAAAACATTAGAAGAGTTACAGGGAAGAGCGAGGAGATTGGAAAGTGATTTTATGAGGTAATGCTTGATGTTTCAGTTTCAGTTTCTATATTTTTTCTCCAGTTACACCATTTTGCTGAATATTGTTGATTGCGCACGGCTATAGGCCTATAGCAGATGAGTTTCTTTACAGCTTGTTTTGATGGTTGTTACTTATTGTATTGTTTTGTATTATAGAAAATAATAATTAGAGGGGGCATACAAACAAGTGATAACTAATTTTGCAAAAGAGCAATTTTTGTGAGATGCAATGGTAAATAATATTTTAAATTCGATACTTGAAATGAGCTAATGTCCATGTGGGTGCACATGCTAATTCTACAAATTATATTTCATGATGCAAAGTGAGCTGTTGGTTAATGTTATTTATTAAGTAATACCATATTTTTTTTCATTGAGCTAGCTAAATAGGAATATCATTCATTATTTTTGGTAAACTTACACTTTTTTCTTAATCTTTTTCTTTTTGAATTTCATCGATCTATATTTTAAATTTTTGTTTTAAAGTCAAATACATTGTTTTTGATAGTGATACTAATGTAACTTAAAAGAAATTGTGCAGTCATTGATATGGATACTTGAGCTAAATTGACTACCTAAATGGAATTAACATTCATCATTTTTAAGGAACTTAAACTTTTTCATTTGATTTAAGTTTATTTTATAGCACAATACATAGTTCAATATATTTATGAGTTTTTTCAAATATATTCATTAATATAGGGTTCATGTGCAAAGCGATATTGAAAAGCATGAAGGCAGATAACAAAATTTTGTTCATCTTTTTAACCCCTTAAATTTGATCTCACACTTGATAAAATAGTAATTTAATTATAACCCTAATACTTAGGACTTTGAGATCAACTAAAATTTGATATTAAATCATTCCTTATTTGAACTAAGTAAGAACTCCTATTATTTAGAAATTTATGATCATGCAAGAGTTTTACTTGAACAAAAGTTTTCCTTATTTCCTGCTTCACATTTAATTTGCTTTTTAAGTATCTTACGTCTGAGTTATTTATGATTTATTTTATATTAGTTTAGTTTTGGTTTAAAATTAAGATTTGTTGAGTCCAATTTAAAAAGTCACATCATATCTAAAGAATGCATCTTCTAATAAGCTGCTAATTTGGGTATAAACACTGAATATTAATAGTCTCAACCCCTTTCCTAATATGGATATTTATTATTACTCTATTCGTATAATTAGTAAACATTGCTAAATATTTTATTTTTTGTAGTATCTCTCTAATAACATTAAATTCATTTAAAACATTATAAAATATTGATGTTCAAAAGAATTATAATTTGAATTGAATCTCTTGACCTCAACTTCAATTGTGTTGGACCTAAGATTGAGTATTGTTGACTCGCATCAGCTAAGGTAGCCTGCTCGTTAATCACTTTCCCTGCATGGTCAACTCTTGTCAATTTAATGTATTTGAGCTAATTGTATATTTATTCTTACCACTTGCCCTGCGCGGTCAACTCTTGTCAATTTAATGTATTTGAGCTAAATTGTATATTTATTCTTACATTGAGATTACCTATTAATAGTGGTCTGTCCCTGCATTAGCAATTGATACATTATAATTGGATAAGTTATTAGAAATATGATTTGATGAAAGACCAAAGAAAGAAATAAGAATTTTCCTTGTATCTTTTCTTTCCTTAGTTTGACACACACACATATATATATATATATATATGTATATATGTATATATATATATGTGTGTGTGTGTATATATATATATATATAAATATAAATTGATATTGATATTGAATTATAACATTCTTATGAGACGCAAAGGAAGAAGCTATAGGTTGACTATTGGGGTCAAATGTTTGGATAAGTTATTAGAAATATGATTTGATGAAAGACTAAAGAAAGAAATAAGAATTTTCCTTGTATCTTTTCTTTCCTTAGTTTGACACAATTTACCTCTTTGTCAATAGACTTCATATATATATATATATATATATATATATATATAAAAATTGATATTGATATTGAATTATAACATTCTTATGAGACGCAAAGGAAGAAGCTATAGGTTGACTATTGGGGTCAAATGTTTGTGTTGTTCGAATTTATGTTCTTTGTCAATATTTAATTATAGCATTTCGTCCTATTAGTGCTTGCATAATATGTTGGAGGTTCTGTATGTCATGATTTCTTCTCCTTTATTGATCTAACTAATATGGTAACATTTCTTTTCAATTAATGAAGTTGCATCTACTTAGTGTCATTTTCTATTTTTACATAATTCACTTTTCTTATATACAATCTTTTTAGTTGACGCAATACACCCATGTATACTGAAACTAGTTACTAAATAAAGCTTAATTTGTTAATTATGTAGATACTACATGTAGTGCTAAATTTTAATGATGGATATGTAAATCTAAGATTTACAAAGAACAATTTCAGAAATTCAAGGTTTACTTTGAACTGTGATGGCGCTTTTGCTTCTGATTTTGCACCTCTAAAAATATATACAGCTGATGATAGGTCTTAAACCATGATCTTTCACTCCATTAGAAAATGAGGGCAAAGTGCTAACTGTACTTACTGGTTGGTTACGTATAAACTTGGATTTTTTATTAGGAAATCCACACTTCTCAAGTCTTAAATGTCTACTGTCATTTGACTTGCTATTAGTTTTTGGACATTCATTTTATCTTTTGATGTTTCAGTTTTACACTTCCCATTATATTATATTAATACTGTCTGCTTTACTAGCTTCCTTTTTTACCTGAAAAAGATATGTTAATTCTGCTTGATTAGTTTTGTTTGCTTTCTAATTTGTTCCTTCTCTGATCAGACTGGACAAGAGAGCATCGGTATTAGATGTGACAGTGGATGGGCAAGACCAAGAGAAGTTCGGCGTTATTAATCGGTATGCTAGGTTTCTTGGTCGGGCGCAATATGATGGTATTCCTCAGAGATACGTCACAGCGCTTCCAATACCAAAAGATCTGCCTAGTGGGGTGCACTGTCTTTCTCTATAATCACAAATCAATTGAATCTTTTCTGTGCTCTGTCATCAATTACCTCAACTTCCCGTAGACATTTTTGTCCTAGTCATGTACTAGTTCTAGCAAGAGCAAAATAGAACCACACAATCAGTATTGCTGAACATACTCAATTGTCATCTCAGATGGAACGTAGCTGTCCAATCTTTTGCATGTAGGCCATTTATGTCATTATCAAGAAAATATACATGTACATCTCTTCAAACTTAGTGAGGGGAGGTGAAACTAGGGTGCCCCATCATTTTTTGCCAGAAGTGGGGAGAGAATACATACTTCTGTGCTTCTAAGCTGTTGACATACAGTTGGCCATCATTATGTATAAGAGATGCCCAGGCGCTCATAATTG</genome_strand>
        <mrna_strand>CTAGAGCTGCTAATAGACTTACTGAAAAG................................................................................GTTATAGAAGACATTGGTTTTAATGAGGAAGGGGCCCCAGGGGTTAAAGCTAAAAGAAGGGCTATATTGACCACTCAGCTTATGCAGCAACTACTCCCCTCTCCCCCTGCAGCAATTCTTTCTGCAGAAGCTAATTCAGAGTATGAGAGTGTGGGTTACTCCATCTCTAGATCGTCATTGGGGGATGCATGTAGCATGCTTTCTTGCTCAAATGCTGATCGTAATATGCCTTGTGATGACAAAGAACT.......................................................................................GCTTCCCAAAGGGTGCATTACTTCTCAGAGGATTAATAAACATGATTTTGCCAAAACATTGGAAGAGTTACAGGGAAGAGCGAGGAGATTGGAAAGTGATTTTATGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGACAAGAGAGCATCGGTATTAGATGTGACAGTGGATGGGCAAGACCAAGAGAAGTTCGGCGTTATTAATCGGTATGCTAGGTTTCTTGGTCGGGCGCAATATGATGGTATTCCTCAGAGATACGTCACAGCGCTTCCAATACCAAAAGATCTGCCTAGTGGGGTGCACTGTCTTTCTCTATAATCACAAATCAATTGAATCTTTTCTGTGCTCTGTCATCAATTACCTCAACTTCCCGTAGACATTTTTGTCCTAGTCATGTACTAGTTCTAGCAAGAGCAAAATAGAACCACACAATCAGTATTGCTGAACATACTCAATTGTCATCTCAGATGGAACGTAGCTGTCCAATCTTTTGCATGTAGGCCATTTATGTCATTATCAAGAAAATATACATGTACATCTCTTCAAACTTAGTGAGGGGAGGTGAAACTAGGGTGCCCCATCATTTTTTGCCAGAAGTGGGGAGAGAATACATACTTCTGTGCTTTTAAGCTGTTGACATACAGTTGGCCATCATTATGTATAAGAGATGCCCAGGCGCTCATAATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0062L07-MA9aD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318489" ref_strand="+" ref_description="SGN-U318489        Tomato 200607 #1 [16 ESTs aligned] arabidopsis/peptide: | Symbol: None | biotin carboxyl carrier protein 1 (BCCP1), identical to biotin carboxyl carrier protein of acetyl-CoA carboxylase precursor (Arabidopsis thaliana) gi:9759121:dbj:BAB09606 | chr5:5360812-5363129 REVERSE | Aliases: MQK4.12, MQK4_12(evalue: 5e-41, score=165) genbank/nr: gi|12006187|gb|AAG44776.1| biotin carboxyl carrier protein subunit [Glycine max](evalue: 3e-45, score=185)">
      <seq>gggcgattggcggcaaatcggccgaattgatctgcctctgccagcttaaatcgcatcgtcccccttctccctcgtgtgtatcgcccccctcccttttctccaatttcggattttcccctgctaaatctcatcaattttaccgtccaattctcttctacaaaaccccccatcaagctcccaatttccctcatagccatacagacaaaattacaatattttcttgaaaaatctggcaatggcttctttcagtgtcccttgtcctaagatttctgtcctctctgttgcttcatcatccaatttaagctcgacccatcagccccagagctccctttccttcagatccggtcctgcattgctccctcgtattcaggggtccagtcgcatccaatctcaggtgtttaaggtgaatgcccagctgaatgaggttgctattgacaagtcgaacaattcaaaacctgtctctgagaaaagcttggaggaagtctccaagactgaatacagtattccagatgcttcatccattcaagcattcatgtctcaggcagctgatcttgtggagcttgtggattcaagggacattgtggagctgcagctaaagcaaaacaattgtgaaattcttataaggaagaaggcggcattgccccagccgcctgtttatatggccccaccatctgttccacaggcctttgttcagcaacagttgcctcctgcaagtgcccctgctcctgcagctccagcagttgctgcacttcctccacctgcaccttcaaagcctaaatcctcacatcctccaatgaaatgtcccatggccggaacattctatcgatcacctgccccaggggcagcaccttttgtaaaggtaggtgacaaggtccagaaagggcaagtcgtctgcattattgaggctatgaaattgatgaatgaaattgaggctgatcaagctggaaccatagttgacatagttgcagaggatggtaagcccgttagtgtggacacgcctctatttgtcattgaaccatgatagaaagaagtaatcttggtgtgcaacataggtggatgaagcagagtgaaattcaaaagttatagagagcaaatctgtcttaagctcaaggcatatctgctcagaagattggttcactattactcttgttgaaatctatgatcatatttatagcttgtattactcattttccttatgctgctcataaattttggaactatattttctttataaagttgtgacttgatgataaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0062L07-MA9aD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0062L07.1" temp_strand="-" temp_description="C06SLm0062L07.1  AC219223.1 htgs_phase:3 submitted_to_sgn_as:C06SLm0062L07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="83457" stop="80194"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83157" g_stop="82817" g_length="341"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="370" r_length="341" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82816" i_stop="82733" i_length="84">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82732" g_stop="82679" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="424" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82678" i_stop="82442" i_length="237">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.919" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82441" g_stop="82308" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="558" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82307" i_stop="82215" i_length="93">
            <donor d_prob="0.905" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82214" g_stop="81914" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="559" r_stop="859" r_length="301" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="81913" i_stop="81352" i_length="562">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.965" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="81351" g_stop="81280" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="860" r_stop="931" r_length="72" r_score="0.986"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="81279" i_stop="80900" i_length="380">
            <donor d_prob="0.988" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="80899" g_stop="80834" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="932" r_stop="997" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="80833" i_stop="80750" i_length="84">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="80749" g_stop="80494" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="998" r_stop="1253" r_length="256" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1254" polyA_stop="1271"/>
      <MATCH_line gen_id="C06SLm0062L07.1" gen_strand="-" ref_id="SGN-U318489" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1224</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0062L07.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U318489" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83157" e_stop="82817"/>
          <exon e_start="82732" e_stop="82679"/>
          <exon e_start="82441" e_stop="82308"/>
          <exon e_start="82214" e_stop="81914"/>
          <exon e_start="81351" e_stop="81280"/>
          <exon e_start="80899" e_stop="80834"/>
          <exon e_start="80749" e_stop="80494"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTGCCTCTGCCAGCTTAAATCGCATCGTCCCCCTTCTCCCTCGTGTGTATCGCCCCCCTCCCTTTTCTCCAATTTCGGATTTTCCCCTGCTAAATCTCATCAATTTTACCGTCCAATTCTCTTCTACAAAACCCCCCATCAAGCTCCCAATTTCCCTCATAGCCATACAGACAAAATTACAATATTTTCTTGAAAAATCTGGCAATGGCTTCTTTCAGTGTCCCTTGTCCTAAGATTTCTGTCCTCTCTGTTGCTTCATCATCCAATTTAAGCTCGACCCATCAGCCCCAGAGCTCCCTTTCCTTCAGATCCGGTCCTGCATTGCTCCCTCGTATTCAGGTTTGTGTTCCCTTTGAGAGGTTAATCGTAAAGATTGAAGCTTTATCATGCATTTGGCTGAGTTTAGTGTGTTTTGTTTTTCAGGGGTCCAGTCGCATCCAATCTCAGGTGTTTAAGGTGAATGCCCAGCTGAATGAGGTGATTTTATATCTCTTGGTTGTTTCTTGGAATTTTGTGTGTTTAAATTATTAGTTTCATTGTGTGAATTAATAGAGGAGGTTGCTGTGGGATGAAAGATAACTAAGAATAGTTTAGCTATAACGAATCCTTATATGTTCTGATTTGATAGTAAGAAAGAAAATGAGACAGGTGATTTATATATAATTTGATTTGGTATTGAAGCATAGTTGATTGATTGAGTTTTGTGAATTTAAGGTTGCTATTGACAAGTCGAACAATTCAAAACCTGTCTCTGAGAAAAGCTTGGAGGAAGTCTCCAAGACTGAATACAGTATTCCAGATGCTTCATCCATTCAAGCATTCATGTCTCAGGCAGCTGATCTTGTGGAGTGCGTTAAGCCCTCATCACCTATAATTTTGTTTGTTTTCTGGTCTTTTTGTAGAGTTCATTTTTAATTTTTTTTTGCCTTTTTTGTTCTTAGGCTTGTGGATTCAAGGGACATTGTGGAGCTGCAGCTAAAGCAAAACAATTGTGAAATTCTTATAAGGAAGAAGGCGGCATTGCCCCAGCCGCCTGTTTATATGGCCTCACCATCTGTTCCACAGGCCTTTGTTCAGCAACAGTTGCCTCCTGCAAGTGCCCCTGCTCCTGCAGCTCCAGCAGTTGCTGCACTTCCTCCACCTGCACCTTCAAAGCCTAAATCCTCACATCCTCCAATGAAATGTCCCATGGCCGGAACATTCTATCGATCACCTGCCCCAGGGGCAGCACCTTTTGTTAAGGTAAATATATACATTGGTTTCACCTGTGAATACCTTGTGTTCAATCGCTCCATAATCCAAATTTAGTAAATGAGCAATTAAAAAAAAGTGGGGAAATGAAGAATGAAGCAACTATTAACAATTGTTAAGCAATTAAACTTGCACAGTTGATTTTATAGTTTGGAAATGGAGTTAATTTGTCAGAGCGGGATGGATATTTGCTGTTGTTGCCGACTGTTATTTCCTGTTTTTCCCTCTCTTTCTTTCCTTGATTATCATTTTTTGGGAGCAAAAGACTGGGAGGTCTATATGGAGATCAATTTTTTCATGTTTTGCACTCTAGCATGTCCCTGAATTCCTTAAAATTATGTGAAATTTGGCATTAAGTTTTGGGTTAGTCAAGAAATCAGAGAAATATTTAGTTTAGGGCAAATTCAATTTCATGCTGTTCACATCTTCTAGCAATCAAAGTGAGAATGTTTGCCACTGTGTGTTTGCTTGCAGCTTCTCTTTTCTCTTTACCTCTGTATGTTCTTGGTCTTGTTGTTTTCTCATGAGCCTGACTAAACTGGTGAATTACCAGGTAGGTGACAAGGTCCAGAAAGGGCAAGTGGTCTGCATTATTGAGGCTATGAAATTGATGAATGAAATTGAGGTAATTCTGGATTACGATTTCAGTTCCTTAATGTGCAAACTTAGTTTATTGTTGCTTGCAATATATAGCTTCCTAAATAAAAAGGCGAATATGATAGGGTAGAAACATTTATAATCAGATAATTCGTAGTGCGGAACATGTTTAAGTGTTGTACTTTCAGTTTTCCTTTTCTGTTGCATCCATTCTCATGGTAATAGACGGTAGGAATGACTTAAATAGGCAAGTGATGTGTCATAAAGAGGAGCTCTTCTCAACATTTCCCATCTTGGCGAAGTTAGTGGCGAAATTATCCGATTTGCTTAGGCCACTCTCGCACCATGATGTATTAGTCTTAAGTTCCTTTTATACCTACTGCATTTATTTTTTGAATTCTTTATCAGGCTGATCAAGCTGGAACCATAGTTGACATAGTTGCAGAGGATGGTAAGCCCGTTAGTGTGGACACGGTATGTCTCTCTTTCTCTAGTTTATATCTTTAGACTAGTTCGGGTCTACTTGTGCTTTATGTGATGTTCAATCTCTTCTTGCAGCCTCTATTTGTCATTGAACCATGATAGAAAGAAGTAATCTTGGTGTGCAACATAGGTGGATGAAGCAGAGTGAAATTCAAAAGTTATAGAGAGCAAATCTGTCTTAAGCTCAAGGCATATCTGCTCAGAAGATTGGTTCACTATTACTCTTGTTGAAATCTATGATCATATTTATAGCTTGTATTACTCATTTTCCTTATGCTGCTCATAAATTTTGGAACTATATTTTCTTTATAAAGTTGTGACTTGATGATAA</genome_strand>
        <mrna_strand>ATCTGCCTCTGCCAGCTTAAATCGCATCGTCCCCCTTCTCCCTCGTGTGTATCGCCCCCCTCCCTTTTCTCCAATTTCGGATTTTCCCCTGCTAAATCTCATCAATTTTACCGTCCAATTCTCTTCTACAAAACCCCCCATCAAGCTCCCAATTTCCCTCATAGCCATACAGACAAAATTACAATATTTTCTTGAAAAATCTGGCAATGGCTTCTTTCAGTGTCCCTTGTCCTAAGATTTCTGTCCTCTCTGTTGCTTCATCATCCAATTTAAGCTCGACCCATCAGCCCCAGAGCTCCCTTTCCTTCAGATCCGGTCCTGCATTGCTCCCTCGTATTCAG....................................................................................GGGTCCAGTCGCATCCAATCTCAGGTGTTTAAGGTGAATGCCCAGCTGAATGAG.............................................................................................................................................................................................................................................GTTGCTATTGACAAGTCGAACAATTCAAAACCTGTCTCTGAGAAAAGCTTGGAGGAAGTCTCCAAGACTGAATACAGTATTCCAGATGCTTCATCCATTCAAGCATTCATGTCTCAGGCAGCTGATCTTGTGGA.............................................................................................GCTTGTGGATTCAAGGGACATTGTGGAGCTGCAGCTAAAGCAAAACAATTGTGAAATTCTTATAAGGAAGAAGGCGGCATTGCCCCAGCCGCCTGTTTATATGGCCCCACCATCTGTTCCACAGGCCTTTGTTCAGCAACAGTTGCCTCCTGCAAGTGCCCCTGCTCCTGCAGCTCCAGCAGTTGCTGCACTTCCTCCACCTGCACCTTCAAAGCCTAAATCCTCACATCCTCCAATGAAATGTCCCATGGCCGGAACATTCTATCGATCACCTGCCCCAGGGGCAGCACCTTTTGTAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGGTGACAAGGTCCAGAAAGGGCAAGTCGTCTGCATTATTGAGGCTATGAAATTGATGAATGAAATTGAG............................................................................................................................................................................................................................................................................................................................................................................................GCTGATCAAGCTGGAACCATAGTTGACATAGTTGCAGAGGATGGTAAGCCCGTTAGTGTGGACACG....................................................................................CCTCTATTTGTCATTGAACCATGATAGAAAGAAGTAATCTTGGTGTGCAACATAGGTGGATGAAGCAGAGTGAAATTCAAAAGTTATAGAGAGCAAATCTGTCTTAAGCTCAAGGCATATCTGCTCAGAAGATTGGTTCACTATTACTCTTGTTGAAATCTATGATCATATTTATAGCTTGTATTACTCATTTTCCTTATGCTGCTCATAAATTTTGGAACTATATTTTCTTTATAAAGTTGTGACTTGATGATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0062L07-MA9aD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U324399" ref_strand="+" ref_description="SGN-U324399        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | UDP-glucose 6-dehydrogenase, putative, very strong similarity to SP:Q96558 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) {Glycine max}; contains Pfam profiles PF03721: UDP-glucose/GDP-mannose dehydrogenase family NAD binding domain, PF00984: UDP-glucose/GDP-mannose dehydrogenase family central domain, PF03720: UDP-glucose/GDP-mannose dehydrogenase family UDP binding domain | chr3:11268328-11270465 REVERSE | Aliases: MUO10.18(evalue: 3e-98, score=354) genbank/nr: gi|77554940|gb|ABA97736.1| UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain, putative [Oryza sativa (japonica cultivar-group)] (evalue: 2e-99, score=364)">
      <seq>ctgtgaatgcaatggtctcaaagaagttgctaactactggaaacaagtgattcaggtgaatgactaccaaaagaatcggtttgttaaccgagttgtctcctctatgttcaacacagtttcaggcaagaagattgctatccttggatttgctttcaagaaagatacaggtgacactagagagacaccagcaattgatgtgtgcaaaggcctattgggagacaatgctaacttgagcatatatgatccacaggtcactgaggatcaaatccgaaaggatctgtcaatgaaaaagtttgattgggataatccaattcacctccagccaatgagccccactgtgatgaagcaactcaatgtagtatgggatgcttatgcagccacaaaaggcgcccacggcctctgtcttttgaccgagtgggatgagttcaagactcttgatttcaagaagatttatgataacatgcaaaaacctgcatttgtgtttgatggaaggaacattgttgatgaacagaagctcagagaaatcgggttcatcgtctactccattgggaaacctttagatggatggctcaaggatatgcctgctgtggcataacccccctggaataagcactgaacatgagagcaaaatctatttatatttttccagtttttgttttttccattcaagcttacaattgttgtttcctagtagcattgttaaaaatgcttacctttatatcatgttttttttgtgtgtaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0062L07-MA9aD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0062L07.1" temp_strand="+" temp_description="C06SLm0062L07.1  AC219223.1 htgs_phase:3 submitted_to_sgn_as:C06SLm0062L07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="90279" stop="91620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90579" g_stop="91326" g_length="748"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="748" r_length="748" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0062L07.1" gen_strand="+" ref_id="SGN-U324399" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>748</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0062L07.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U324399" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90579" e_stop="91326"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTGAATGCAATGGTCTCAAAGAAGTTGCTAACTACTGGAAACAAGTGATTCAGGTGAATGACTACCAAAAGAATCGGTTTGTTAACCGAGTTGTCTCCTCTATGTTCAACACAGTTTCAGGCAAGAAGATTGCTATCCTTGGATTTGCTTTCAAGAAAGATACAGGTGACACTAGAGAGACACCAGCAATTGATGTGTGCAAAGGCCTATTGGGAGACAATGCTAACTTGAGCATATATGATCCACAGGTCACTGAGGATCAAATCCGAAAGGATCTGTCAATGAAAAAGTTTGATTGGGATAATCCAATTCACCTCCAGCCAATGAGCCCCACTGTGATGAAGCAACTCAATGTAGTATGGGATGCTTATGCAGCCACAAAAGGCGCCCACGGCCTCTGTCTTTTGACCGAGTGGGATGAGTTCAAGACTCTTGATTTCAAGAAGATTTATGATAACATGCAAAAACCTGCATTTGTGTTTGATGGAAGGAACATTGTTGATGAACAGAAGCTCAGAGAAATCGGGTTCATCGTCTACTCCATTGGGAAACCTTTAGATGGATGGCTCAAGGATATGCCTGCTGTGGCATAACCCCCCTGGAATAAGCACTGAACATGAGAGCAAAATCTATTTATATTTTTCCAGTTCTTGTCTTTTCCATTCAAGCTTACAATTGTTGTTTCCTAGTAGCATTGTTAAAAATGCTTACCTTTATATCATGTTTTTTTTGTGTGTGAACTTCAG</genome_strand>
        <mrna_strand>CTGTGAATGCAATGGTCTCAAAGAAGTTGCTAACTACTGGAAACAAGTGATTCAGGTGAATGACTACCAAAAGAATCGGTTTGTTAACCGAGTTGTCTCCTCTATGTTCAACACAGTTTCAGGCAAGAAGATTGCTATCCTTGGATTTGCTTTCAAGAAAGATACAGGTGACACTAGAGAGACACCAGCAATTGATGTGTGCAAAGGCCTATTGGGAGACAATGCTAACTTGAGCATATATGATCCACAGGTCACTGAGGATCAAATCCGAAAGGATCTGTCAATGAAAAAGTTTGATTGGGATAATCCAATTCACCTCCAGCCAATGAGCCCCACTGTGATGAAGCAACTCAATGTAGTATGGGATGCTTATGCAGCCACAAAAGGCGCCCACGGCCTCTGTCTTTTGACCGAGTGGGATGAGTTCAAGACTCTTGATTTCAAGAAGATTTATGATAACATGCAAAAACCTGCATTTGTGTTTGATGGAAGGAACATTGTTGATGAACAGAAGCTCAGAGAAATCGGGTTCATCGTCTACTCCATTGGGAAACCTTTAGATGGATGGCTCAAGGATATGCCTGCTGTGGCATAACCCCCCTGGAATAAGCACTGAACATGAGAGCAAAATCTATTTATATTTTTCCAGTTTTTGTTTTTTCCATTCAAGCTTACAATTGTTGTTTCCTAGTAGCATTGTTAAAAATGCTTACCTTTATATCATGTTTTTTTTGTGTGTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0062L07-MA9aD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U333237" ref_strand="+" ref_description="SGN-U333237        Tomato 200607 #1 [2 ESTs aligned]">
      <seq>tttttccccaaaatcaatttctcatcttctacccctttaatcgaccttgatttttcttcttgaagatcaaatcaacctccgatacttctaattcgtttcattctctatcgattggtacctcttttggatctatccgtctggaaatcgaattccgagttaaatatggtgcaaaaaagaccatacagtgaagaaaagttgtatgaggtttcatctaagcagccgagacatgtagaaccgagtactcagctagtttcctttttgcagtttccgtgtgaatcagtggctcccaactcttacacttcaggtggcgatgaggagaaattttcagaagtcagagcttttagtgagaaaagacctgatagttgcgatgtgactgctgtccctgtttcttcagagaaagcaattgagacgagcatccatggctctgcttcaaactcttcttggacctctagtagcaccagcgaagaagacattaggtccgaggtgccttttcatgtattgacggcttctaaatattacagtagtgatcctccattccgagttgttattcatccaatggaggtctattcccctcttttcaacaatcctcctcggaaatcggctgcccattggaccagatttccaagccgaattaccagaatgccgtgcatatgatagtaaaaatatatccgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0062L07-MA9aD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0062L07.1" temp_strand="+" temp_description="C06SLm0062L07.1  AC219223.1 htgs_phase:3 submitted_to_sgn_as:C06SLm0062L07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="93936" stop="96508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94236" g_stop="94391" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="156" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94392" i_stop="95476" i_length="1085">
            <donor d_prob="0.687" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95477" g_stop="95624" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="304" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="95625" i_stop="95840" i_length="216">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95841" g_stop="96208" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="673" r_length="369" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0062L07.1" gen_strand="+" ref_id="SGN-U333237" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>672</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0062L07.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U333237" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94236" e_stop="94391"/>
          <exon e_start="95477" e_stop="95624"/>
          <exon e_start="95841" e_stop="96208"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTCCCCAAAATCAATTTCTCATCTTCTACCCCTTTAATCGACCTTGATTTTTCTTCTTGAAGATCAAATCAACCTCCGATACTTCTAATTCGTTTCATTCTCTATCGATTGGTACCTCTTTTGGATCTATCCGTCTGGAAATCGAATTCCGAGGTTAGGGTTTCAGATCTATAGGTTTTTTCATCAGATCTGTTCGATCTACCTTTATTTCATGAAATTAATTCAGTTTCTAGCTTGATTTTGTTATCATCTCTTGATTTCTTGAGAAAAAAAAAGATCGATTTTTTTTTTATTTTGAGGATTTTCTTGTTATATCAGCTTTTGTTCGTGCTCGATCTGCGATTCGTCGCTTCATTTCTGATCGATTTGATTATTTTTTGAATTTTTTTACATCGAATTCAAATTTGGGGATCTAGGGTTAGGGTTAGGTTTCTTAATTCATAAAATTGTAATTAAATCATTTTAGGTCACGATTTCCAGAACAAAACCAGTAAAAATACGTCCGATTTCCTGATACGGACTGTCGATTGATAGTAATTAGCTCAAAATCAAAGATCTCATCTTTTTAAAAAAAAAATTGTTTATTAAATAAACAAAAATATATATTTTTTAATATTTTAGATTTTTACTTTCAAAAACTCTGAGCCACTCCATTTTCACTGTACATGTGCCACGTGTTACAAATTAGAAACTTATACAAATGATTACTATGTCCTCTACCTCTTGAGTGGCAACCTTTTCAACTATTACTTTGATTCTTTGCTTGAAACAGAGTGAACTGTGTATCTACTTGAATGTCCAACTGTGCTTTGACAATTTCTAGTCTTGTCTACATTTGTTCTTTATTATATCATATGGGGTGTTCTATGTTGCTACTTCCCTCAACATACTCTCTGAATTTTTTCTCTTGTTCTTTATTAGTATGCTATTGATAGTTTAGTATCTGTTGTTGTGCAGTATTTTGTAAGTATCTTTTTTGGGGGTTATGGAAGTTATATTTCTGTAGTTAGAAAATATCAATTTTGTGGTTAGCTATGACCAAAAAGATTTCATTTTTGTGTTCAATGCTGGATGTTGTGTCTACATCTCTGTCATGTACTTTTTGTGTTTGCAGAATGCTCTGGATACCGTTTGTGTTTTATGGAATTGTTTGCGTTCTTTGAATTCATGGAACTTAATTCTCCTCCACTTTCCCTTTTCTGAATCTGCTTAACACCTTCTTCAACTTCCTTTTGCAGTTAAATATGGTGCAAAAAAGACCATACAGTGAAGAAAAGTTGTATGAGGTTTCATCTAAGCAGCCGAGACATGTAGAACCGAGTACTCAGCTAGTTTCCTTTTTGCAGTTTCCGTGTGAATCAGTGGCTCCCAACTCTTACACTTCAGGTTAGGAAGAGATTAATCTATCAAATTCCTGAAATGATTTACGTTGTTTTAACTGCTTTGTGGATAATGGTTAGAATGGTTTTATTTACTCAAACTTAAGATACTCTTGGAAAACAGCTTCTCATTAGGAGGTTGCTCTTTTAGCAGCACGTTTGGATGTTGAATTAATTTGTGGATTTTCATCCTTGGATGATCTAAATTTTTGGTCTTTGGTAGGTGGCGATGAGGAGAAATTTTCAGAAGTCAGAGCTTTTAGTGAGAAAAGACCTGATAGTTGCGATGTGACTGCTGTCCCTGTTTCTTCAGAGAAAGCAATTGAGACGAGCATCCATGGCTCTGCTTCAAACTCTTCTTGGACCTCTAGTAGCACCAGCGAAGAAGACATTAGGTCCGAGGTGCCTTTTCATGTATTGACGGCTTCTAAATATTACAGTAGTGATCCTCCATTCCGAGTTGTTATTCATCCAATGGAGGTCTATTCCCCTCTTTTCAACAATCCTCCTCGGAAATCGG-TTCCCATTGGACCAGATTTCCAAGCCGAATTACCAGAATGGGGTGCATATGATAGTAAAAATATATCCGTG</genome_strand>
        <mrna_strand>TTTTTCCCCAAAATCAATTTCTCATCTTCTACCCCTTTAATCGACCTTGATTTTTCTTCTTGAAGATCAAATCAACCTCCGATACTTCTAATTCGTTTCATTCTCTATCGATTGGTACCTCTTTTGGATCTATCCGTCTGGAAATCGAATTCCGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAATATGGTGCAAAAAAGACCATACAGTGAAGAAAAGTTGTATGAGGTTTCATCTAAGCAGCCGAGACATGTAGAACCGAGTACTCAGCTAGTTTCCTTTTTGCAGTTTCCGTGTGAATCAGTGGCTCCCAACTCTTACACTTCAG........................................................................................................................................................................................................................GTGGCGATGAGGAGAAATTTTCAGAAGTCAGAGCTTTTAGTGAGAAAAGACCTGATAGTTGCGATGTGACTGCTGTCCCTGTTTCTTCAGAGAAAGCAATTGAGACGAGCATCCATGGCTCTGCTTCAAACTCTTCTTGGACCTCTAGTAGCACCAGCGAAGAAGACATTAGGTCCGAGGTGCCTTTTCATGTATTGACGGCTTCTAAATATTACAGTAGTGATCCTCCATTCCGAGTTGTTATTCATCCAATGGAGGTCTATTCCCCTCTTTTCAACAATCCTCCTCGGAAATCGGCTGCCCATTGGACCAGATTTCCAAGCCGAATTACCAGAATGCCGTGCATATGATAGTAAAAATATATCCGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06SLm0062L07-MA9aD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326618" ref_strand="+" ref_description="SGN-U326618        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | myb family transcription factor / ELM2 domain-containing protein, contains Pfam profile: PF00249 Myb-like DNA-binding domain; contains Pfam profile: PF01448 ELM2 domain | chr2:1045453-1047678 REVERSE | Aliases: T4M8.10, T4M8_10(evalue: 4e-25, score=102) genbank/nr: expressed(evalue: 2e-26, score=109)">
      <seq>aagaattgggtgctcctgtggagatgctggttcctttggatgtgttcggttgcacatcatggaagcaagggagaaacttaaggcggccttgggtgaggaaacatttgttaggttgggtgtttatgatatgggagagatagtggcagagaaatggagtgaagaggaagaggaattatttcatgaagttgtattttccaatcctgcagcattaggcaagaatttctgggaccaccttgctgttgaatttccttcacggagcaagagagatcttgttagctattacttcaatgtctttattttgcggaagcgtgccaagcagaataggttgacccatcaaatatagacagtgataacgatgaatggcaggagattgatgatgatgttgttgctacgggagctcaaatgacagatgacgacgaggattctgtggttgaatcaccaatatatcaaaattatcctggtcacaatgagatatatgtgactgaaaaacaagcatatgatgaagaagctggtgttgcaaccttggaagattatcagacgataaatttttgcaggaggaaggtcttgagtgatgtgtcaaaagcatgtcctgatgaattgattgataataacagtagttgtggtcacaatattcagcctctagacagacatcattcaaatgaagtgggtaaccatgatgttgaagataactcttgtaccactgatgcagctggggcttcttcagatacaccacaggtaaaaactggatgattgtaaacactgggcaagtcattttgctggtgttggcattgacagtgggcatgattttgtgatggagccatctaatggtaaagaatgggatatgggagggtacttgagctgtcctaagaatgaagttgatttgttaccaacttgctctatgattgaggaagtgtttggagacgaagcctggagttccaagcacagagatggtcacagtttaagcaagcattgacctgttgcatatgatacccgtttattttttgccgttggatcatccttggaacacttcttgcaaaagtgagatccatttttacttgtatattatttagtggtgaaaggacagagcatgttagggataaaagttgagattttcgaccttgctcttggttgttagtaggaagctgttttgaggtaggcggttaggattaatttatatgtaaattatatggccgagttgagccatctttcgacaaatgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06SLm0062L07-MA9aD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06SLm0062L07.1" temp_strand="+" temp_description="C06SLm0062L07.1  AC219223.1 htgs_phase:3 submitted_to_sgn_as:C06SLm0062L07 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="96067" stop="97893"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96367" g_stop="97593" g_length="1227"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1227" r_length="1227" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06SLm0062L07.1" gen_strand="+" ref_id="SGN-U326618" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1227</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06SLm0062L07.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U326618" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96367" e_stop="97593"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAATTGGGTGCTCCTGTGGAGATGCTGGTTCCTTTGGATGTGTTCGGTTGCACATCATGGAAGCAAGGGAGAAACTTAAGGCGGCCTTGGGTGAGGAAACATTTGTTAGGTTGGGTGTTTATGATATGGGAGAGATAGTGGCAGAGAAATGGAGTGAAGAGGAAGAGGAATTATTTCATGAAGTTGTATTTTCCAATCCTGCAGCATTAGGCAAGAATTTCTGGGACCACCTTGCTGTTGAATTTCCTTCACGGAGCAAGAGAGATCTTGTTAGCTATTACTTCAATGTCTTTATTTTGCGGAAGCGTGCCAAGCAGAATAGGTTTGACCCATCAAATATAGACAGTGATAACGATGAATGGCAGGAGATTGATGATGATGTTGTTGCTACGGGAGCTCAAATGACAGATGACGACGAGGATTCTGTGGTTGAATCACCAATATATCAAAATTATCCTGGTCACAATGAGATATATGTGACTGAAAAACAAGCATATGATGAAGAAGCTGGTGTTGCAACCTTGGAAGATTATCAGACGATAAATTTTTGCAGGAGGAAGGTCTTGAGTGATGTGTCAAAAGCATGTCCTGATGAATTGATTGATAATAACAGTAGTTGTGGTCACAATATTCAGCCTCTAGACAGACATCATTCAAATGAAGTGGGTAACCATGATGTTGAAGATAACTCTTGTACCACTGATGCAGCTGGGGCTTCTTCAGATACACCACAGGTAAAAACT-GATGATTGTAAACACTGGGCAAGTCATTTTGCTGGTGTTGGCATTGACAGTGGGCATGATTTTGTGATGGAGCCATCTAATGGTAAAGAATGGGATATGGGAGGGTACTTGAGCTGTCCTAAGAATGAAGTTGATTTGTTACCAACTTGCTCTATGATTGAGGAAGTGTTTGGAGACGAAGCCTGGAGTTCCAAGCACAGAGATGGTCACAGTTTAAGCAAGCATTGACCTGTTGCATATGATACCCGTTTATTTTTTGCCGTTGGATCATCCTTGGAACACTTCTTGCAAAAGTGAGATCCATTTTTACTTGTATATTATTTAGTGGTGAAAGGACAGAGCATGTTAGGGATAAAAGTTGAGATTTTCGACCTTGCTCTTGGTTGTTAGTAGGAAGCTGTTTTGAGGTAGGCGGTTAGGATTAATTTATATGTAAATTATATGGCCGAGTTGAGCCATCTTTCGACAAATGAAAAAAAAAA</genome_strand>
        <mrna_strand>AAGAATTGGGTGCTCCTGTGGAGATGCTGGTTCCTTTGGATGTGTTCGGTTGCACATCATGGAAGCAAGGGAGAAACTTAAGGCGGCCTTGGGTGAGGAAACATTTGTTAGGTTGGGTGTTTATGATATGGGAGAGATAGTGGCAGAGAAATGGAGTGAAGAGGAAGAGGAATTATTTCATGAAGTTGTATTTTCCAATCCTGCAGCATTAGGCAAGAATTTCTGGGACCACCTTGCTGTTGAATTTCCTTCACGGAGCAAGAGAGATCTTGTTAGCTATTACTTCAATGTCTTTATTTTGCGGAAGCGTGCCAAGCAGAATAGG-TTGACCCATCAAATATAGACAGTGATAACGATGAATGGCAGGAGATTGATGATGATGTTGTTGCTACGGGAGCTCAAATGACAGATGACGACGAGGATTCTGTGGTTGAATCACCAATATATCAAAATTATCCTGGTCACAATGAGATATATGTGACTGAAAAACAAGCATATGATGAAGAAGCTGGTGTTGCAACCTTGGAAGATTATCAGACGATAAATTTTTGCAGGAGGAAGGTCTTGAGTGATGTGTCAAAAGCATGTCCTGATGAATTGATTGATAATAACAGTAGTTGTGGTCACAATATTCAGCCTCTAGACAGACATCATTCAAATGAAGTGGGTAACCATGATGTTGAAGATAACTCTTGTACCACTGATGCAGCTGGGGCTTCTTCAGATACACCACAGGTAAAAACTGGATGATTGTAAACACTGGGCAAGTCATTTTGCTGGTGTTGGCATTGACAGTGGGCATGATTTTGTGATGGAGCCATCTAATGGTAAAGAATGGGATATGGGAGGGTACTTGAGCTGTCCTAAGAATGAAGTTGATTTGTTACCAACTTGCTCTATGATTGAGGAAGTGTTTGGAGACGAAGCCTGGAGTTCCAAGCACAGAGATGGTCACAGTTTAAGCAAGCATTGACCTGTTGCATATGATACCCGTTTATTTTTTGCCGTTGGATCATCCTTGGAACACTTCTTGCAAAAGTGAGATCCATTTTTACTTGTATATTATTTAGTGGTGAAAGGACAGAGCATGTTAGGGATAAAAGTTGAGATTTTCGACCTTGCTCTTGGTTGTTAGTAGGAAGCTGTTTTGAGGTAGGCGGTTAGGATTAATTTATATGTAAATTATATGGCCGAGTTGAGCCATCTTTCGACAAATGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>10</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="5485" PGL_stop="10902"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="5485" e_stop="5525"/>
            <exon e_start="7720" e_stop="7898"/>
            <exon e_start="8161" e_stop="8344"/>
            <exon e_start="8535" e_stop="8609"/>
            <exon e_start="8828" e_stop="8937"/>
            <exon e_start="9071" e_stop="9289"/>
            <exon e_start="9729" e_stop="9884"/>
            <exon e_start="10472" e_stop="10902"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.895" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.937" e_score="1.000"/>
          <exon-intron don_prob="0.822" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.768" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.905" acc_prob="0.863" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.980" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="5485" e_stop="5525" e_length="41"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.895">
            <gDNA_intron_boundary i_start="5526" i_stop="7719" i_length="2194"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="7720" e_stop="7898" e_length="179"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.937">
            <gDNA_intron_boundary i_start="7899" i_stop="8160" i_length="262"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="8161" e_stop="8344" e_length="184"/>
          </exon>
          <intron i_serial="3" don_prob="0.822" acc_prob="0.992">
            <gDNA_intron_boundary i_start="8345" i_stop="8534" i_length="190"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="8535" e_stop="8609" e_length="75"/>
          </exon>
          <intron i_serial="4" don_prob="0.990" acc_prob="0.768">
            <gDNA_intron_boundary i_start="8610" i_stop="8827" i_length="218"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="8828" e_stop="8937" e_length="110"/>
          </exon>
          <intron i_serial="5" don_prob="0.969" acc_prob="1.000">
            <gDNA_intron_boundary i_start="8938" i_stop="9070" i_length="133"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="9071" e_stop="9289" e_length="219"/>
          </exon>
          <intron i_serial="6" don_prob="0.905" acc_prob="0.863">
            <gDNA_intron_boundary i_start="9290" i_stop="9728" i_length="439"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="9729" e_stop="9884" e_length="156"/>
          </exon>
          <intron i_serial="7" don_prob="0.998" acc_prob="0.980">
            <gDNA_intron_boundary i_start="9885" i_stop="10471" i_length="587"/>
          </intron>
          <exon e_serial="8" e_score="0.981">
            <gDNA_exon_boundary e_start="10472" e_stop="10902" e_length="431"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5485" stop="5525"/>
              <exon start="7720" stop="7898"/>
              <exon start="8161" stop="8344"/>
              <exon start="8535" stop="8609"/>
              <exon start="8828" stop="8937"/>
              <exon start="9071" stop="9289"/>
              <exon start="9729" stop="9884"/>
              <exon start="10472" stop="10902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318987" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGAGTGAGGAAGAAGGAGACAGTCACCATGGATTCCCCAA : GTGTTATCCCTTATATCTTTTTGCTACTTCTTGTTGGATGCTCGGCCAGACCTCTCTACCCACTTCCTGGCAGAAGAAATGATAGGAATAAACAGCCTTTACAAACATTTCGAGCTTACAACATTGCACACCGAGGTTCAAATGGAGAAATTCCTGAAGAAACTGCAGCAGCATACATG : AGAGCTATTGAAGAGGGTACTGATTTCATCGAAACAGATATTTTAGCATCTAAAGACGGCGCTCTTATATGTTTCCATGATGTCATACTTGATGATACAACTGATATAGCAAATCACAAGGAATTTGCTGATCGAAAGAGGACCTATGATGTTCAAGGGGTTAACACTACTGGATATTTTCTGG : TTGACTTCACCCTTGAAGAATTGAAGCTTCTGCGTGTTAAGCAGAGATATCCTTTCAGAGATCAGCAATATAATG : GAGAATTTTCTATCATTACTTTTGAGGAGTTCATCTCAATTGCATTGGATGCCCATAGAGTTGTTGGAATATATCCAGAGATAAAAAATCCAGTCCTTATCAACCAACAC : GTCAAATGGCCAGGTGGTAAGAAATTTGAGGACAAGTTTGTTGAGACACTGAAGAAGTATGGATACAAAGGTTCATATATGTCGAAGCAATGGTTAAAGCAGCCTGCATTCATTCAATCTTTTGCGCCGACGTCACTAATTTATATATCAAACCAAACGGACCTGCCTAAGATCTTCCTCATTGATGACACAAATACACCAACTCAAGACACCAATCAG : TCATATTGGGAGATTACTGCAGATGGTTATCTTGATTATATCAAGGATTATGTGGTGGGGATTGGTCCCTGGAAGGACACCATAGTTCCTTGTTCCAACAATTATCTGCAAACACCTTCTGATCTCATCGCAAGAGCACATGCCCGTAATCTACAG : GTGCATCCATACACTTTCCGGAATGAGAACCAATTCGTACACTTCAACTTCAGTGAAGATCCATACAACGAGTATGACTACTGGATAAACAAGATGGGAGTTGATGGCCTCTTCACAGACTTCACAGGCAGCCTTCACCACTATCAGGAATGGACCAATCCATTTGCATCTGGAGAAAAAGAAGCAACTAGGCTTCTGAATAAGATTGAATTGATGCTTTCCAAGTTCAAGTACACCTGAGTTAAATTCTATTCAACATTGTCTGTGGCAAGGCAATGCTATTTATTGGTCTGTATATATCATTGGCTTTCCAATTTATATTTGCCAAAAGAAAAAACAGGTTTCAATATATTGTAATTGGTGCAAATGACACTCTTGAAGCATTTGGACCCTCTTAACCCTATCTCTTAGATTATGGATTTATACAAGAG</gDNA_template>
            <first_frame> R  S  E  E  E  G  D  S  H  H  G  F  P  K :   C  Y  P  L  Y  L  F  A  T  S  C  W  M  L  G  Q  T  S  L  P  T  S  W  Q  K  K  *  *  E  *  T  A  F  T  N  I  S  S  L  Q  H  C  T  P  R  F  K  W  R  N  S  *  R  N  C  S  S  I  H   : E  S  Y  *  R  G  Y  *  F  H  R  N  R  Y  F  S  I  *  R  R  R  S  Y  M  F  P  *  C  H  T  *  *  Y  N  *  Y  S  K  S  Q  G  I  C  *  S  K  E  D  L  *  C  S  R  G  *  H  Y  W  I  F  S  G :   *  L  H  P  *  R  I  E  A  S  A  C  *  A  E  I  S  F  Q  R  S  A  I  *  W :   R  I  F  Y  H  Y  F  *  G  V  H  L  N  C  I  G  C  P  *  S  C  W  N  I  S  R  D  K  K  S  S  P  Y  Q  P  T   : R  Q  M  A  R  W  *  E  I  *  G  Q  V  C  *  D  T  E  E  V  W  I  Q  R  F  I  Y  V  E  A  M  V  K  A  A  C  I  H  S  I  F  C  A  D  V  T  N  L  Y  I  K  P  N  G  P  A  *  D  L  P  H  *  *  H  K  Y  T  N  S  R  H  Q  S   : V  I  L  G  D  Y  C  R  W  L  S  *  L  Y  Q  G  L  C  G  G  D  W  S  L  E  G  H  H  S  S  L  F  Q  Q  L  S  A  N  T  F  *  S  H  R  K  S  T  C  P  *  S  T   : G  A  S  I  H  F  P  E  *  E  P  I  R  T  L  Q  L  Q  *  R  S  I  Q  R  V  *  L  L  D  K  Q  D  G  S  *  W  P  L  H  R  L  H  R  Q  P  S  P  L  S  G  M  D  Q  S  I  C  I  W  R  K  R  S  N  *  A  S  E  *  D  *  I  D  A  F  Q  V  Q  V  H  L  S  *  I  L  F  N  I  V  C  G  K  A  M  L  F  I  G  L  Y  I  S  L  A  F  Q  F  I  F  A  K  R  K  N  R  F  Q  Y  I  V  I  G  A  N  D  T  L  E  A  F  G  P  S  *  P  Y  L  L  D  Y  G  F  I  Q  E </first_frame>
            <second_frame>  G  V  R  K  K  E  T  V  T  M  D  S  P   : S  V  I  P  Y  I  F  L  L  L  L  V  G  C  S  A  R  P  L  Y  P  L  P  G  R  R  N  D  R  N  K  Q  P  L  Q  T  F  R  A  Y  N  I  A  H  R  G  S  N  G  E  I  P  E  E  T  A  A  A  Y  M  :  R  A  I  E  E  G  T  D  F  I  E  T  D  I  L  A  S  K  D  G  A  L  I  C  F  H  D  V  I  L  D  D  T  T  D  I  A  N  H  K  E  F  A  D  R  K  R  T  Y  D  V  Q  G  V  N  T  T  G  Y  F  L   : V  D  F  T  L  E  E  L  K  L  L  R  V  K  Q  R  Y  P  F  R  D  Q  Q  Y  N   : G  E  F  S  I  I  T  F  E  E  F  I  S  I  A  L  D  A  H  R  V  V  G  I  Y  P  E  I  K  N  P  V  L  I  N  Q  H  :  V  K  W  P  G  G  K  K  F  E  D  K  F  V  E  T  L  K  K  Y  G  Y  K  G  S  Y  M  S  K  Q  W  L  K  Q  P  A  F  I  Q  S  F  A  P  T  S  L  I  Y  I  S  N  Q  T  D  L  P  K  I  F  L  I  D  D  T  N  T  P  T  Q  D  T  N  Q  :  S  Y  W  E  I  T  A  D  G  Y  L  D  Y  I  K  D  Y  V  V  G  I  G  P  W  K  D  T  I  V  P  C  S  N  N  Y  L  Q  T  P  S  D  L  I  A  R  A  H  A  R  N  L  Q  :  V  H  P  Y  T  F  R  N  E  N  Q  F  V  H  F  N  F  S  E  D  P  Y  N  E  Y  D  Y  W  I  N  K  M  G  V  D  G  L  F  T  D  F  T  G  S  L  H  H  Y  Q  E  W  T  N  P  F  A  S  G  E  K  E  A  T  R  L  L  N  K  I  E  L  M  L  S  K  F  K  Y  T  *  V  K  F  Y  S  T  L  S  V  A  R  Q  C  Y  L  L  V  C  I  Y  H  W  L  S  N  L  Y  L  P  K  E  K  T  G  F  N  I  L  *  L  V  Q  M  T  L  L  K  H  L  D  P  L  N  P  I  S  *  I  M  D  L  Y  K   </second_frame>
            <third_frame>   E  *  G  R  R  R  Q  S  P  W  I  P  Q  :  V  L  S  L  I  S  F  C  Y  F  L  L  D  A  R  P  D  L  S  T  H  F  L  A  E  E  M  I  G  I  N  S  L  Y  K  H  F  E  L  T  T  L  H  T  E  V  Q  M  E  K  F  L  K  K  L  Q  Q  H  T  * :   E  L  L  K  R  V  L  I  S  S  K  Q  I  F  *  H  L  K  T  A  L  L  Y  V  S  M  M  S  Y  L  M  I  Q  L  I  *  Q  I  T  R  N  L  L  I  E  R  G  P  M  M  F  K  G  L  T  L  L  D  I  F  W  :  L  T  S  P  L  K  N  *  S  F  C  V  L  S  R  D  I  L  S  E  I  S  N  I  M  :  E  N  F  L  S  L  L  L  R  S  S  S  Q  L  H  W  M  P  I  E  L  L  E  Y  I  Q  R  *  K  I  Q  S  L  S  T  N  T :   S  N  G  Q  V  V  R  N  L  R  T  S  L  L  R  H  *  R  S  M  D  T  K  V  H  I  C  R  S  N  G  *  S  S  L  H  S  F  N  L  L  R  R  R  H  *  F  I  Y  Q  T  K  R  T  C  L  R  S  S  S  L  M  T  Q  I  H  Q  L  K  T  P  I  S :   H  I  G  R  L  L  Q  M  V  I  L  I  I  S  R  I  M  W  W  G  L  V  P  G  R  T  P  *  F  L  V  P  T  I  I  C  K  H  L  L  I  S  S  Q  E  H  M  P  V  I  Y  R :   C  I  H  T  L  S  G  M  R  T  N  S  Y  T  S  T  S  V  K  I  H  T  T  S  M  T  T  G  *  T  R  W  E  L  M  A  S  S  Q  T  S  Q  A  A  F  T  T  I  R  N  G  P  I  H  L  H  L  E  K  K  K  Q  L  G  F  *  I  R  L  N  *  C  F  P  S  S  S  T  P  E  L  N  S  I  Q  H  C  L  W  Q  G  N  A  I  Y  W  S  V  Y  I  I  G  F  P  I  Y  I  C  Q  K  K  K  Q  V  S  I  Y  C  N  W  C  K  *  H  S  *  S  I  W  T  L  L  T  L  S  L  R  L  W  I  Y  T  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0062L07.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5486" stop="5525"/>
                    <exon start="7720" stop="7898"/>
                    <exon start="8161" stop="8344"/>
                    <exon start="8535" stop="8609"/>
                    <exon start="8828" stop="8937"/>
                    <exon start="9071" stop="9289"/>
                    <exon start="9729" stop="9884"/>
                    <exon start="10472" stop="10711"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1200</number_coding_nucleotides>
                  <number_encoded_amino_acids>400</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GVRKKETVTMDSPSVIPYIFLLLLVGCSARPLYPLPGRRNDRNKQPLQTFRAYNIAHRGSNGEIPEETAAAYMRAIEEGTDFIETDILASKDGALICFHDVILDDTTDIANHKEFADRKRTYDVQGVNTTGYFLVDFTLEELKLLRVKQRYPFRDQQYNGEFSIITFEEFISIALDAHRVVGIYPEIKNPVLINQHVKWPGGKKFEDKFVETLKKYGYKGSYMSKQWLKQPAFIQSFAPTSLIYISNQTDLPKIFLIDDTNTPTQDTNQSYWEITADGYLDYIKDYVVGIGPWKDTIVPCSNNYLQTPSDLIARAHARNLQVHPYTFRNENQFVHFNFSEDPYNEYDYWINKMGVDGLFTDFTGSLHHYQEWTNPFASGEKEATRLLNKIELMLSKFKYT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="33942" PGL_stop="41362"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33942" e_stop="34062"/>
            <exon e_start="35618" e_stop="35685"/>
            <exon e_start="35764" e_stop="35929"/>
            <exon e_start="36032" e_stop="36094"/>
            <exon e_start="36444" e_stop="36539"/>
            <exon e_start="36806" e_stop="36973"/>
            <exon e_start="39136" e_stop="39306"/>
            <exon e_start="40252" e_stop="40401"/>
            <exon e_start="40467" e_stop="40598"/>
            <exon e_start="41007" e_stop="41362"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.308" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.933" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.963" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.887" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.943" e_score="1.000"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="33942" e_stop="34062" e_length="121"/>
          </exon>
          <intron i_serial="1" don_prob="0.308" acc_prob="0.973">
            <gDNA_intron_boundary i_start="34063" i_stop="35617" i_length="1555"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="35618" e_stop="35685" e_length="68"/>
          </exon>
          <intron i_serial="2" don_prob="0.933" acc_prob="0.997">
            <gDNA_intron_boundary i_start="35686" i_stop="35763" i_length="78"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="35764" e_stop="35929" e_length="166"/>
          </exon>
          <intron i_serial="3" don_prob="0.972" acc_prob="0.981">
            <gDNA_intron_boundary i_start="35930" i_stop="36031" i_length="102"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="36032" e_stop="36094" e_length="63"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="36095" i_stop="36443" i_length="349"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="36444" e_stop="36539" e_length="96"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="36540" i_stop="36805" i_length="266"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="36806" e_stop="36973" e_length="168"/>
          </exon>
          <intron i_serial="6" don_prob="0.963" acc_prob="0.993">
            <gDNA_intron_boundary i_start="36974" i_stop="39135" i_length="2162"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="39136" e_stop="39306" e_length="171"/>
          </exon>
          <intron i_serial="7" don_prob="0.887" acc_prob="0.982">
            <gDNA_intron_boundary i_start="39307" i_stop="40251" i_length="945"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="40252" e_stop="40401" e_length="150"/>
          </exon>
          <intron i_serial="8" don_prob="0.985" acc_prob="0.967">
            <gDNA_intron_boundary i_start="40402" i_stop="40466" i_length="65"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="40467" e_stop="40598" e_length="132"/>
          </exon>
          <intron i_serial="9" don_prob="0.997" acc_prob="0.943">
            <gDNA_intron_boundary i_start="40599" i_stop="41006" i_length="408"/>
          </intron>
          <exon e_serial="10" e_score="0.986">
            <gDNA_exon_boundary e_start="41007" e_stop="41362" e_length="356"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33942" stop="34062"/>
              <exon start="35618" stop="35685"/>
              <exon start="35764" stop="35929"/>
              <exon start="36032" stop="36094"/>
              <exon start="36444" stop="36539"/>
              <exon start="36806" stop="36973"/>
              <exon start="39136" stop="39306"/>
              <exon start="40252" stop="40401"/>
              <exon start="40467" stop="40598"/>
              <exon start="41007" stop="41362"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U322066" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAAAGTAGCCTGAGAGAGCAACTTCATGACCACATCAACGCTGAGATTGTTACTGGAACAATCTCTCATAAAGAGGACGCTATGCATTATCTCACTTGGACCTACTTGTTTCGTAGATTG : ATGGTTAACCCAGCTTACTATGGCCTAGAGCATGCAGAACCTGGGATTCTAAATTCTTATTTGTCTAG : CTTGGTGCAAAGCACATTTGAGGATCTTGAAGACTCTGGATGCATCAAGGTTACCGAGGACAGTGTTGAACCACTGATGTTGGGCTCAATAGCATCTCAGTATTATCTGAAGTACACCACTGTATCAATGTTTGGCTCAAAAATAGGATCTGATACATCACTTGAG : GTTTTCCTACAAATACTGTCTGGTGCTTCTGAATATGATGAGCTCCCGGTGAGGCATAATGAG : GAAAACTACAATGAAAAATTAGCTGAGAAAGTTCCATATGCTGTCGACCACAATCGCCTGGATGATCCTCATGTGAAAGCAAATCTGCTCTTTCAG : GCTCATTTTTCCCAATCAGAGTTGCCAATCAGCGATTATGTCACAGACTTAAAGTCTGTGCTGGATCAAAGTATACGTGTTATCCAGGCTATGATAGATATTTGTGCCAACAGTGGATGGCTCTCAAGTACCATTACCTGTATGCATCTGTTGCAAATGGTCATGCAG : GGCTTGTGGTTTGATAGAGACTCTCCTCTTTGGATGTTACCATGCATGACTGATGATCTACTCAACTCATTGCAAAAAAAAGGAATTGCTAGTATCCAGCAGCTGTTGGATTGCCCTTCAGAATCATTACGGGCTATCACTGGAAGTTCAGCTGCCTCGAAACTGTATCAG : GATATGCGGCATTTCCCTCGGATTCAAGTTCGACTTAAAATTCAGCCAAAGGAATCTAATGGTGGAAAGATTTTAACCTTGAACATTAGATTGGAAGATGCAAATACTCAGCGAAGAACAGCAAAAGCTTTTATCCCACGATATCCAAAG : GTAAAAGATGAAGCTTGGTGGTTAGTCCTTTGTAATACTTCCGCAAGTGAACTGTATGCTCTGAAGAGAGTGTCTTTCTCTGGTCGTTTGCAGACACACATGGATTTGCCATCCACTCTGACCAATTTCCAG : GGGATAAAGCTCATTCTAGTATCGGATTCTTACATTGGGTTTGAACAAGAACACTCTATTGAAGGATTGACTTAATCTGGAAGAAACTATACCAACTCCAGATTGTAATGCAATGCTCCCAAAATCAGGATTTGACTTTGTATAGCACAAAGGCTCACTTTTTCACAATCAGTTATAGAAGTTGTGTTACGGTCTACATTTGTAATGAGATATTGCTTTGTAATTTTCTTGAGTAATTGATCGGCATCCTTCATTTTTCTTTGTCATGTAGATCCAATTGTATATATGCATCAGGGTACTGTTGAAAGTCTTATACACACACCCTAATCAATATAGAGCTTTCCATTCAATGTCCA</gDNA_template>
            <first_frame> *  K  *  P  E  R  A  T  S  *  P  H  Q  R  *  D  C  Y  W  N  N  L  S  *  R  G  R  Y  A  L  S  H  L  D  L  L  V  S  *  I   : D  G  *  P  S  L  L  W  P  R  A  C  R  T  W  D  S  K  F  L  F  V  *  :  L  G  A  K  H  I  *  G  S  *  R  L  W  M  H  Q  G  Y  R  G  Q  C  *  T  T  D  V  G  L  N  S  I  S  V  L  S  E  V  H  H  C  I  N  V  W  L  K  N  R  I  *  Y  I  T  *   : G  F  P  T  N  T  V  W  C  F  *  I  *  *  A  P  G  E  A  *  *   : G  K  L  Q  *  K  I  S  *  E  S  S  I  C  C  R  P  Q  S  P  G  *  S  S  C  E  S  K  S  A  L  S   : G  S  F  F  P  I  R  V  A  N  Q  R  L  C  H  R  L  K  V  C  A  G  S  K  Y  T  C  Y  P  G  Y  D  R  Y  L  C  Q  Q  W  M  A  L  K  Y  H  Y  L  Y  A  S  V  A  N  G  H  A   : G  L  V  V  *  *  R  L  S  S  L  D  V  T  M  H  D  *  *  S  T  Q  L  I  A  K  K  R  N  C  *  Y  P  A  A  V  G  L  P  F  R  I  I  T  G  Y  H  W  K  F  S  C  L  E  T  V  S   : G  Y  A  A  F  P  S  D  S  S  S  T  *  N  S  A  K  G  I  *  W  W  K  D  F  N  L  E  H  *  I  G  R  C  K  Y  S  A  K  N  S  K  S  F  Y  P  T  I  S  K   : G  K  R  *  S  L  V  V  S  P  L  *  Y  F  R  K  *  T  V  C  S  E  E  S  V  F  L  W  S  F  A  D  T  H  G  F  A  I  H  S  D  Q  F  P   : G  D  K  A  H  S  S  I  G  F  L  H  W  V  *  T  R  T  L  Y  *  R  I  D  L  I  W  K  K  L  Y  Q  L  Q  I  V  M  Q  C  S  Q  N  Q  D  L  T  L  Y  S  T  K  A  H  F  F  T  I  S  Y  R  S  C  V  T  V  Y  I  C  N  E  I  L  L  C  N  F  L  E  *  L  I  G  I  L  H  F  S  L  S  C  R  S  N  C  I  Y  A  S  G  Y  C  *  K  S  Y  T  H  T  L  I  N  I  E  L  S  I  Q  C  P </first_frame>
            <second_frame>  E  S  S  L  R  E  Q  L  H  D  H  I  N  A  E  I  V  T  G  T  I  S  H  K  E  D  A  M  H  Y  L  T  W  T  Y  L  F  R  R  L  :  M  V  N  P  A  Y  Y  G  L  E  H  A  E  P  G  I  L  N  S  Y  L  S  S :   L  V  Q  S  T  F  E  D  L  E  D  S  G  C  I  K  V  T  E  D  S  V  E  P  L  M  L  G  S  I  A  S  Q  Y  Y  L  K  Y  T  T  V  S  M  F  G  S  K  I  G  S  D  T  S  L  E  :  V  F  L  Q  I  L  S  G  A  S  E  Y  D  E  L  P  V  R  H  N  E  :  E  N  Y  N  E  K  L  A  E  K  V  P  Y  A  V  D  H  N  R  L  D  D  P  H  V  K  A  N  L  L  F  Q  :  A  H  F  S  Q  S  E  L  P  I  S  D  Y  V  T  D  L  K  S  V  L  D  Q  S  I  R  V  I  Q  A  M  I  D  I  C  A  N  S  G  W  L  S  S  T  I  T  C  M  H  L  L  Q  M  V  M  Q  :  G  L  W  F  D  R  D  S  P  L  W  M  L  P  C  M  T  D  D  L  L  N  S  L  Q  K  K  G  I  A  S  I  Q  Q  L  L  D  C  P  S  E  S  L  R  A  I  T  G  S  S  A  A  S  K  L  Y  Q  :  D  M  R  H  F  P  R  I  Q  V  R  L  K  I  Q  P  K  E  S  N  G  G  K  I  L  T  L  N  I  R  L  E  D  A  N  T  Q  R  R  T  A  K  A  F  I  P  R  Y  P  K  :  V  K  D  E  A  W  W  L  V  L  C  N  T  S  A  S  E  L  Y  A  L  K  R  V  S  F  S  G  R  L  Q  T  H  M  D  L  P  S  T  L  T  N  F  Q  :  G  I  K  L  I  L  V  S  D  S  Y  I  G  F  E  Q  E  H  S  I  E  G  L  T  *  S  G  R  N  Y  T  N  S  R  L  *  C  N  A  P  K  I  R  I  *  L  C  I  A  Q  R  L  T  F  S  Q  S  V  I  E  V  V  L  R  S  T  F  V  M  R  Y  C  F  V  I  F  L  S  N  *  S  A  S  F  I  F  L  C  H  V  D  P  I  V  Y  M  H  Q  G  T  V  E  S  L  I  H  T  P  *  S  I  *  S  F  P  F  N  V   </second_frame>
            <third_frame>   K  V  A  *  E  S  N  F  M  T  T  S  T  L  R  L  L  L  E  Q  S  L  I  K  R  T  L  C  I  I  S  L  G  P  T  C  F  V  D  * :   W  L  T  Q  L  T  M  A  *  S  M  Q  N  L  G  F  *  I  L  I  C  L   : A  W  C  K  A  H  L  R  I  L  K  T  L  D  A  S  R  L  P  R  T  V  L  N  H  *  C  W  A  Q  *  H  L  S  I  I  *  S  T  P  L  Y  Q  C  L  A  Q  K  *  D  L  I  H  H  L  R :   F  S  Y  K  Y  C  L  V  L  L  N  M  M  S  S  R  *  G  I  M  R :   K  T  T  M  K  N  *  L  R  K  F  H  M  L  S  T  T  I  A  W  M  I  L  M  *  K  Q  I  C  S  F  R :   L  I  F  P  N  Q  S  C  Q  S  A  I  M  S  Q  T  *  S  L  C  W  I  K  V  Y  V  L  S  R  L  *  *  I  F  V  P  T  V  D  G  S  Q  V  P  L  P  V  C  I  C  C  K  W  S  C  R :   A  C  G  L  I  E  T  L  L  F  G  C  Y  H  A  *  L  M  I  Y  S  T  H  C  K  K  K  E  L  L  V  S  S  S  C  W  I  A  L  Q  N  H  Y  G  L  S  L  E  V  Q  L  P  R  N  C  I  R :   I  C  G  I  S  L  G  F  K  F  D  L  K  F  S  Q  R  N  L  M  V  E  R  F  *  P  *  T  L  D  W  K  M  Q  I  L  S  E  E  Q  Q  K  L  L  S  H  D  I  Q  R :   *  K  M  K  L  G  G  *  S  F  V  I  L  P  Q  V  N  C  M  L  *  R  E  C  L  S  L  V  V  C  R  H  T  W  I  C  H  P  L  *  P  I  S  R :   G  *  S  S  F  *  Y  R  I  L  T  L  G  L  N  K  N  T  L  L  K  D  *  L  N  L  E  E  T  I  P  T  P  D  C  N  A  M  L  P  K  S  G  F  D  F  V  *  H  K  G  S  L  F  H  N  Q  L  *  K  L  C  Y  G  L  H  L  *  *  D  I  A  L  *  F  S  *  V  I  D  R  H  P  S  F  F  F  V  M  *  I  Q  L  Y  I  C  I  R  V  L  L  K  V  L  Y  T  H  P  N  Q  Y  R  A  F  H  S  M  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0062L07.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33943" stop="34062"/>
                    <exon start="35618" stop="35685"/>
                    <exon start="35764" stop="35929"/>
                    <exon start="36032" stop="36094"/>
                    <exon start="36444" stop="36539"/>
                    <exon start="36806" stop="36973"/>
                    <exon start="39136" stop="39306"/>
                    <exon start="40252" stop="40401"/>
                    <exon start="40467" stop="40598"/>
                    <exon start="41007" stop="41081"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1206</number_coding_nucleotides>
                  <number_encoded_amino_acids>402</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ESSLREQLHDHINAEIVTGTISHKEDAMHYLTWTYLFRRLMVNPAYYGLEHAEPGILNSYLSSLVQSTFEDLEDSGCIKVTEDSVEPLMLGSIASQYYLKYTTVSMFGSKIGSDTSLEVFLQILSGASEYDELPVRHNEENYNEKLAEKVPYAVDHNRLDDPHVKANLLFQAHFSQSELPISDYVTDLKSVLDQSIRVIQAMIDICANSGWLSSTITCMHLLQMVMQGLWFDRDSPLWMLPCMTDDLLNSLQKKGIASIQQLLDCPSESLRAITGSSAASKLYQDMRHFPRIQVRLKIQPKESNGGKILTLNIRLEDANTQRRTAKAFIPRYPKVKDEAWWLVLCNTSASELYALKRVSFSGRLQTHMDLPSTLTNFQGIKLILVSDSYIGFEQEHSIEGLT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="46142" PGL_stop="41766"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46142" e_stop="45706"/>
            <exon e_start="44291" e_stop="44100"/>
            <exon e_start="42685" e_stop="42526"/>
            <exon e_start="42426" e_stop="42324"/>
            <exon e_start="42229" e_stop="42148"/>
            <exon e_start="42074" e_stop="41766"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.739" acc_prob="0.604" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.937" e_score="1.000"/>
          <exon-intron don_prob="0.899" acc_prob="0.438" e_score="1.000"/>
          <exon-intron don_prob="0.088" acc_prob="0.695" e_score="1.000"/>
          <exon-intron don_prob="0.926" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="46142" e_stop="45706" e_length="437"/>
          </exon>
          <intron i_serial="1" don_prob="0.739" acc_prob="0.604">
            <gDNA_intron_boundary i_start="45705" i_stop="44292" i_length="1414"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="44291" e_stop="44100" e_length="192"/>
          </exon>
          <intron i_serial="2" don_prob="0.960" acc_prob="0.937">
            <gDNA_intron_boundary i_start="44099" i_stop="42686" i_length="1414"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="42685" e_stop="42526" e_length="160"/>
          </exon>
          <intron i_serial="3" don_prob="0.899" acc_prob="0.438">
            <gDNA_intron_boundary i_start="42525" i_stop="42427" i_length="99"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="42426" e_stop="42324" e_length="103"/>
          </exon>
          <intron i_serial="4" don_prob="0.088" acc_prob="0.695">
            <gDNA_intron_boundary i_start="42323" i_stop="42230" i_length="94"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="42229" e_stop="42148" e_length="82"/>
          </exon>
          <intron i_serial="5" don_prob="0.926" acc_prob="0.995">
            <gDNA_intron_boundary i_start="42147" i_stop="42075" i_length="73"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="42074" e_stop="41766" e_length="309"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46142" stop="45706"/>
              <exon start="44291" stop="44100"/>
              <exon start="42685" stop="42526"/>
              <exon start="42426" stop="42324"/>
              <exon start="42229" stop="42148"/>
              <exon start="42074" stop="41766"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U319191" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAACTTCTCCTTCGAAGTTCGATCTACCCTCCTCCGATTGCTTCCATTTCACGTCGGACCTAGGGTTCCGATGATCTCATCCACAAGTTTTCAATGCCTTTGATTTTCTATTCTGCGAAGAATGACAAATTTTAGTGGAGCATTTTCCATTACTGAAGCTTCATCTCCCACCGAAGCAGGTCCGGCCCGAACCGGAACCGGAACTGCCGGTAGAGATGACTTCATATTCCGGTTGTCCAGCTCAGCAACTGCGTGCCATGGGTTCTGGCACGATGTGATACTGGTATTACCATCGGTTTTGTTCGTACTGTACTTAGGGTTTCATGCTAGGAGCAACATTAAGAAGCTCAGTCATCGTCGGTCTTTTGTAATGATTGGATACTATGGACTTTTGTGGTTTGCTGTTCTTTTAAACCTTTGTTGGTGCTTTCTTCAG : GCATGGCAGTGCACTCCAGGGAAGCAGGTGGCTTGGAATCTTTTATCGTTGTTTGCAACGTCTGCAATGCTATTTCTGGAGATTAGCATAGTGGCATTCTTACTTAAGGAGAATTATGCGAGCTGTTTGGAAACTTTATCACGTACTTTCATGGTTTCAGGCCTTTTTGTTGGCGTGGATTTACTATTAAAG : GCAATTTATATATTTGGACTTGGTATTCCACTTTTCCTTGACATGGAAATAGCTGATAGGGGGAAGTGGCGTGTCTGGAGCACCAACAAGCTTCTTCTTACTGCAGCTTATGGCTACATATTGTTTGTGCATTTCTCAAAGTGGAGAGATAAGCTGCCTC : CACGTCCAGCCTTTTACAATTACGTCATCGTCATGTTTGTGACAAGTGCTGTAATGTTATTTGCCTGTGGGCTTGCAGGCATTAGGGGTGGCTTTGGACTTTG : GTTGTATAATTTGACTGTAGTTTGTTATCACTCGCTTTATCTTCCATTTCTTTACGTGACGTTCCTGGCTGATTTTTTCAAG : GAGGAAGATTGGCTTCTGGACAGCGCATATTACTCAGAGATGAAAGATGCAGGGTTTTTTGATGCAGACGGGGAGTAAGCTTGTAAAACTGTAGACAAATAAGCAGTCCCAACATGTAATTGTAAATATTGACTGGCTGGTATTATGAGAAACAAAACTAATAGTTATTCAAGTGATTGCATTGTCTAGCTTATTTGCTGGTTGAGATCATTGATCCACTTGGCAAAAGTATAAGAAAGAACAACTAAAATGTTATTGTAAAGATATGTATTTTTGAATAGACCATGCTGGCTAAATATTTGGGTTGAA</gDNA_template>
            <first_frame> A  T  S  P  S  K  F  D  L  P  S  S  D  C  F  H  F  T  S  D  L  G  F  R  *  S  H  P  Q  V  F  N  A  F  D  F  L  F  C  E  E  *  Q  I  L  V  E  H  F  P  L  L  K  L  H  L  P  P  K  Q  V  R  P  E  P  E  P  E  L  P  V  E  M  T  S  Y  S  G  C  P  A  Q  Q  L  R  A  M  G  S  G  T  M  *  Y  W  Y  Y  H  R  F  C  S  Y  C  T  *  G  F  M  L  G  A  T  L  R  S  S  V  I  V  G  L  L  *  *  L  D  T  M  D  F  C  G  L  L  F  F  *  T  F  V  G  A  F  F  R :   H  G  S  A  L  Q  G  S  R  W  L  G  I  F  Y  R  C  L  Q  R  L  Q  C  Y  F  W  R  L  A  *  W  H  S  Y  L  R  R  I  M  R  A  V  W  K  L  Y  H  V  L  S  W  F  Q  A  F  L  L  A  W  I  Y  Y  *  R :   Q  F  I  Y  L  D  L  V  F  H  F  S  L  T  W  K  *  L  I  G  G  S  G  V  S  G  A  P  T  S  F  F  L  L  Q  L  M  A  T  Y  C  L  C  I  S  Q  S  G  E  I  S  C  L  :  H  V  Q  P  F  T  I  T  S  S  S  C  L  *  Q  V  L  *  C  Y  L  P  V  G  L  Q  A  L  G  V  A  L  D  F   : G  C  I  I  *  L  *  F  V  I  T  R  F  I  F  H  F  F  T  *  R  S  W  L  I  F  S  R :   R  K  I  G  F  W  T  A  H  I  T  Q  R  *  K  M  Q  G  F  L  M  Q  T  G  S  K  L  V  K  L  *  T  N  K  Q  S  Q  H  V  I  V  N  I  D  W  L  V  L  *  E  T  K  L  I  V  I  Q  V  I  A  L  S  S  L  F  A  G  *  D  H  *  S  T  W  Q  K  Y  K  K  E  Q  L  K  C  Y  C  K  D  M  Y  F  *  I  D  H  A  G  *  I  F  G  L   </first_frame>
            <second_frame>  Q  L  L  L  R  S  S  I  Y  P  P  P  I  A  S  I  S  R  R  T  *  G  S  D  D  L  I  H  K  F  S  M  P  L  I  F  Y  S  A  K  N  D  K  F  *  W  S  I  F  H  Y  *  S  F  I  S  H  R  S  R  S  G  P  N  R  N  R  N  C  R  *  R  *  L  H  I  P  V  V  Q  L  S  N  C  V  P  W  V  L  A  R  C  D  T  G  I  T  I  G  F  V  R  T  V  L  R  V  S  C  *  E  Q  H  *  E  A  Q  S  S  S  V  F  C  N  D  W  I  L  W  T  F  V  V  C  C  S  F  K  P  L  L  V  L  S  S   : G  M  A  V  H  S  R  E  A  G  G  L  E  S  F  I  V  V  C  N  V  C  N  A  I  S  G  D  *  H  S  G  I  L  T  *  G  E  L  C  E  L  F  G  N  F  I  T  Y  F  H  G  F  R  P  F  C  W  R  G  F  T  I  K   : G  N  L  Y  I  W  T  W  Y  S  T  F  P  *  H  G  N  S  *  *  G  E  V  A  C  L  E  H  Q  Q  A  S  S  Y  C  S  L  W  L  H  I  V  C  A  F  L  K  V  E  R  *  A  A  S :   T  S  S  L  L  Q  L  R  H  R  H  V  C  D  K  C  C  N  V  I  C  L  W  A  C  R  H  *  G  W  L  W  T  L  :  V  V  *  F  D  C  S  L  L  S  L  A  L  S  S  I  S  L  R  D  V  P  G  *  F  F  Q   : G  G  R  L  A  S  G  Q  R  I  L  L  R  D  E  R  C  R  V  F  *  C  R  R  G  V  S  L  *  N  C  R  Q  I  S  S  P  N  M  *  L  *  I  L  T  G  W  Y  Y  E  K  Q  N  *  *  L  F  K  *  L  H  C  L  A  Y  L  L  V  E  I  I  D  P  L  G  K  S  I  R  K  N  N  *  N  V  I  V  K  I  C  I  F  E  *  T  M  L  A  K  Y  L  G  *  </second_frame>
            <third_frame>   N  F  S  F  E  V  R  S  T  L  L  R  L  L  P  F  H  V  G  P  R  V  P  M  I  S  S  T  S  F  Q  C  L  *  F  S  I  L  R  R  M  T  N  F  S  G  A  F  S  I  T  E  A  S  S  P  T  E  A  G  P  A  R  T  G  T  G  T  A  G  R  D  D  F  I  F  R  L  S  S  S  A  T  A  C  H  G  F  W  H  D  V  I  L  V  L  P  S  V  L  F  V  L  Y  L  G  F  H  A  R  S  N  I  K  K  L  S  H  R  R  S  F  V  M  I  G  Y  Y  G  L  L  W  F  A  V  L  L  N  L  C  W  C  F  L  Q  :  A  W  Q  C  T  P  G  K  Q  V  A  W  N  L  L  S  L  F  A  T  S  A  M  L  F  L  E  I  S  I  V  A  F  L  L  K  E  N  Y  A  S  C  L  E  T  L  S  R  T  F  M  V  S  G  L  F  V  G  V  D  L  L  L  K  :  A  I  Y  I  F  G  L  G  I  P  L  F  L  D  M  E  I  A  D  R  G  K  W  R  V  W  S  T  N  K  L  L  L  T  A  A  Y  G  Y  I  L  F  V  H  F  S  K  W  R  D  K  L  P   : P  R  P  A  F  Y  N  Y  V  I  V  M  F  V  T  S  A  V  M  L  F  A  C  G  L  A  G  I  R  G  G  F  G  L  W :   L  Y  N  L  T  V  V  C  Y  H  S  L  Y  L  P  F  L  Y  V  T  F  L  A  D  F  F  K  :  E  E  D  W  L  L  D  S  A  Y  Y  S  E  M  K  D  A  G  F  F  D  A  D  G  E  *  A  C  K  T  V  D  K  *  A  V  P  T  C  N  C  K  Y  *  L  A  G  I  M  R  N  K  T  N  S  Y  S  S  D  C  I  V  *  L  I  C  W  L  R  S  L  I  H  L  A  K  V  *  E  R  T  T  K  M  L  L  *  R  Y  V  F  L  N  R  P  C  W  L  N  I  W  V  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0062L07.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46038" stop="45706"/>
                    <exon start="44291" stop="44100"/>
                    <exon start="42685" stop="42526"/>
                    <exon start="42426" stop="42324"/>
                    <exon start="42229" stop="42148"/>
                    <exon start="42074" stop="41997"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>945</number_coding_nucleotides>
                  <number_encoded_amino_acids>315</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSILRRMTNFSGAFSITEASSPTEAGPARTGTGTAGRDDFIFRLSSSATACHGFWHDVILVLPSVLFVLYLGFHARSNIKKLSHRRSFVMIGYYGLLWFAVLLNLCWCFLQAWQCTPGKQVAWNLLSLFATSAMLFLEISIVAFLLKENYASCLETLSRTFMVSGLFVGVDLLLKAIYIFGLGIPLFLDMEIADRGKWRVWSTNKLLLTAAYGYILFVHFSKWRDKLPPRPAFYNYVIVMFVTSAVMLFACGLAGIRGGFGLWLYNLTVVCYHSLYLPFLYVTFLADFFKEEDWLLDSAYYSEMKDAGFFDADGE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="61842" PGL_stop="63529"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61842" e_stop="61873"/>
            <exon e_start="62075" e_stop="63529"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.916" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="61842" e_stop="61873" e_length="32"/>
          </exon>
          <intron i_serial="1" don_prob="0.916" acc_prob="0.996">
            <gDNA_intron_boundary i_start="61874" i_stop="62074" i_length="201"/>
          </intron>
          <exon e_serial="2" e_score="0.999">
            <gDNA_exon_boundary e_start="62075" e_stop="63529" e_length="1455"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61842" stop="61873"/>
              <exon start="62075" stop="63293"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U325209" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62811" stop="63529"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U338170" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCACATTCACCTAATAAAGCTGCGGAATCTAG : TCCAAACATGCTACAGCTTATTCAGAAGGTGGACCAGTCGAGAGAGTGTGGTTCCGGGGCAGAGTTAGGTCATTCTGAAAAAAAAGCATCATCTAGGATGCCTGAAGCAGCAGAGAATTCTGATGAGTCTGTTGGTCATCACCTGAGGAGTCAGTCTGCTTTCTCTCAAGGCTATGGTCTACAACTTGGCCCTCCATCCCGACGTGCATCAGTCCGAACCCATTCTTTGACATCTCAGCGCCCGATCCAAGCTTTTAGCTCTTCACATTATAGTCATGCTACTGTTGACACTGGTGAGAAGAATCAAGGACCAATGCACCCCCCTCATCAGGCTCCATCCGTACTTTCACCTTCTGATCCATCCCAGGAAGGATTGAAGAATATAGGATTTGGTATTGCAGGAAGTACCAATAATGTAACTTCTATGTATGCAATGCCCGGAAACCTTTCTCCAGCGTTTGATTCTCATTCTGGTTTTCCCTATAGGGGAGGTCAGCTTAAAATTCCAAATGTGGCTAGGACTACTGCACAACTCCCAACAAATCAATCCTTGAGTGTATCCTTTGATAAGCATGCTTCCTCTCATACAGAGAAAGGTGACTCTTGCAGAGGATCTGCAAATGGTCAGTCTGTGGAGGCTTCCTTGCTGGCTGGGGCTGACAAGTTGCAAGATAAGCCTATTCTCTCCGCAGACAAGTCTCAATTGAGTAACACCAATCGTACAGTGGAAAGTATCTTTACCAATCAAGTTACATCCCAAGAGCCAGTATCAGTTTCTCAGGCGTTAGTGTCTGGCATCGGTCAGCAGGGTACGTATTCAAAAATGTCATCCGGTATATGGGGTACTTTTCCACCACCTCAGCAAGCTTTTGGCTCTCAGTATAGCAAGGATTCTTCTCATATTTTCCAATCACATCAAATGAATATTGTGGAGTCGTCATTATCTGCTCCTGGGAGGCAAAGTGATCAATACTTGAATAGAGGTAGTTTTGCATCCCAGATTGGTACTAGCTCAGTGAATTCCCTGGTTTCTTCTGAAGGGGAAGAACAGCGACCAAAGGAAAGTCATTCTCAGCAAATATCAGTGACAAATGTTGACCACATCCAGAAGATGAATGATTCACAGGGTAGAGAACCTTTTATCAAGTATATCTTGGGAGGATCTGCTGCAAATGCTGCATCTATGCAGAGAGATATTGAAGCCTTTGGCCGAACTTTGAAGCCCAACCTTTCAAATCAGAACTATTCCCTATTAAACCAAGTGCAGGCTATCAAACATGTGGAGGTCGATCCAAGCAATAGGGACTTCAAGAGAATGAAAGTAGCAGACAGCAGTACAGGTGCTCCACAATTTTCTTCTGGGGACACTGAAATGTTGGGAGTCTCTGTGCCAGAGGATTTGCAAAGAAGCATTTCATCTCAACAAGGGAGAAAAATGTCTCCTCATGATGTACT</gDNA_template>
            <first_frame> S  H  S  P  N  K  A  A  E  S  S :   P  N  M  L  Q  L  I  Q  K  V  D  Q  S  R  E  C  G  S  G  A  E  L  G  H  S  E  K  K  A  S  S  R  M  P  E  A  A  E  N  S  D  E  S  V  G  H  H  L  R  S  Q  S  A  F  S  Q  G  Y  G  L  Q  L  G  P  P  S  R  R  A  S  V  R  T  H  S  L  T  S  Q  R  P  I  Q  A  F  S  S  S  H  Y  S  H  A  T  V  D  T  G  E  K  N  Q  G  P  M  H  P  P  H  Q  A  P  S  V  L  S  P  S  D  P  S  Q  E  G  L  K  N  I  G  F  G  I  A  G  S  T  N  N  V  T  S  M  Y  A  M  P  G  N  L  S  P  A  F  D  S  H  S  G  F  P  Y  R  G  G  Q  L  K  I  P  N  V  A  R  T  T  A  Q  L  P  T  N  Q  S  L  S  V  S  F  D  K  H  A  S  S  H  T  E  K  G  D  S  C  R  G  S  A  N  G  Q  S  V  E  A  S  L  L  A  G  A  D  K  L  Q  D  K  P  I  L  S  A  D  K  S  Q  L  S  N  T  N  R  T  V  E  S  I  F  T  N  Q  V  T  S  Q  E  P  V  S  V  S  Q  A  L  V  S  G  I  G  Q  Q  G  T  Y  S  K  M  S  S  G  I  W  G  T  F  P  P  P  Q  Q  A  F  G  S  Q  Y  S  K  D  S  S  H  I  F  Q  S  H  Q  M  N  I  V  E  S  S  L  S  A  P  G  R  Q  S  D  Q  Y  L  N  R  G  S  F  A  S  Q  I  G  T  S  S  V  N  S  L  V  S  S  E  G  E  E  Q  R  P  K  E  S  H  S  Q  Q  I  S  V  T  N  V  D  H  I  Q  K  M  N  D  S  Q  G  R  E  P  F  I  K  Y  I  L  G  G  S  A  A  N  A  A  S  M  Q  R  D  I  E  A  F  G  R  T  L  K  P  N  L  S  N  Q  N  Y  S  L  L  N  Q  V  Q  A  I  K  H  V  E  V  D  P  S  N  R  D  F  K  R  M  K  V  A  D  S  S  T  G  A  P  Q  F  S  S  G  D  T  E  M  L  G  V  S  V  P  E  D  L  Q  R  S  I  S  S  Q  Q  G  R  K  M  S  P  H  D  V   </first_frame>
            <second_frame>  H  I  H  L  I  K  L  R  N  L   : V  Q  T  C  Y  S  L  F  R  R  W  T  S  R  E  S  V  V  P  G  Q  S  *  V  I  L  K  K  K  H  H  L  G  C  L  K  Q  Q  R  I  L  M  S  L  L  V  I  T  *  G  V  S  L  L  S  L  K  A  M  V  Y  N  L  A  L  H  P  D  V  H  Q  S  E  P  I  L  *  H  L  S  A  R  S  K  L  L  A  L  H  I  I  V  M  L  L  L  T  L  V  R  R  I  K  D  Q  C  T  P  L  I  R  L  H  P  Y  F  H  L  L  I  H  P  R  K  D  *  R  I  *  D  L  V  L  Q  E  V  P  I  M  *  L  L  C  M  Q  C  P  E  T  F  L  Q  R  L  I  L  I  L  V  F  P  I  G  E  V  S  L  K  F  Q  M  W  L  G  L  L  H  N  S  Q  Q  I  N  P  *  V  Y  P  L  I  S  M  L  P  L  I  Q  R  K  V  T  L  A  E  D  L  Q  M  V  S  L  W  R  L  P  C  W  L  G  L  T  S  C  K  I  S  L  F  S  P  Q  T  S  L  N  *  V  T  P  I  V  Q  W  K  V  S  L  P  I  K  L  H  P  K  S  Q  Y  Q  F  L  R  R  *  C  L  A  S  V  S  R  V  R  I  Q  K  C  H  P  V  Y  G  V  L  F  H  H  L  S  K  L  L  A  L  S  I  A  R  I  L  L  I  F  S  N  H  I  K  *  I  L  W  S  R  H  Y  L  L  L  G  G  K  V  I  N  T  *  I  E  V  V  L  H  P  R  L  V  L  A  Q  *  I  P  W  F  L  L  K  G  K  N  S  D  Q  R  K  V  I  L  S  K  Y  Q  *  Q  M  L  T  T  S  R  R  *  M  I  H  R  V  E  N  L  L  S  S  I  S  W  E  D  L  L  Q  M  L  H  L  C  R  E  I  L  K  P  L  A  E  L  *  S  P  T  F  Q  I  R  T  I  P  Y  *  T  K  C  R  L  S  N  M  W  R  S  I  Q  A  I  G  T  S  R  E  *  K  *  Q  T  A  V  Q  V  L  H  N  F  L  L  G  T  L  K  C  W  E  S  L  C  Q  R  I  C  K  E  A  F  H  L  N  K  G  E  K  C  L  L  M  M  Y  </second_frame>
            <third_frame>   T  F  T  *  *  S  C  G  I  *  :  S  K  H  A  T  A  Y  S  E  G  G  P  V  E  R  V  W  F  R  G  R  V  R  S  F  *  K  K  S  I  I  *  D  A  *  S  S  R  E  F  *  *  V  C  W  S  S  P  E  E  S  V  C  F  L  S  R  L  W  S  T  T  W  P  S  I  P  T  C  I  S  P  N  P  F  F  D  I  S  A  P  D  P  S  F  *  L  F  T  L  *  S  C  Y  C  *  H  W  *  E  E  S  R  T  N  A  P  P  S  S  G  S  I  R  T  F  T  F  *  S  I  P  G  R  I  E  E  Y  R  I  W  Y  C  R  K  Y  Q  *  C  N  F  Y  V  C  N  A  R  K  P  F  S  S  V  *  F  S  F  W  F  S  L  *  G  R  S  A  *  N  S  K  C  G  *  D  Y  C  T  T  P  N  K  S  I  L  E  C  I  L  *  *  A  C  F  L  S  Y  R  E  R  *  L  L  Q  R  I  C  K  W  S  V  C  G  G  F  L  A  G  W  G  *  Q  V  A  R  *  A  Y  S  L  R  R  Q  V  S  I  E  *  H  Q  S  Y  S  G  K  Y  L  Y  Q  S  S  Y  I  P  R  A  S  I  S  F  S  G  V  S  V  W  H  R  S  A  G  Y  V  F  K  N  V  I  R  Y  M  G  Y  F  S  T  T  S  A  S  F  W  L  S  V  *  Q  G  F  F  S  Y  F  P  I  T  S  N  E  Y  C  G  V  V  I  I  C  S  W  E  A  K  *  S  I  L  E  *  R  *  F  C  I  P  D  W  Y  *  L  S  E  F  P  G  F  F  *  R  G  R  T  A  T  K  G  K  S  F  S  A  N  I  S  D  K  C  *  P  H  P  E  D  E  *  F  T  G  *  R  T  F  Y  Q  V  Y  L  G  R  I  C  C  K  C  C  I  Y  A  E  R  Y  *  S  L  W  P  N  F  E  A  Q  P  F  K  S  E  L  F  P  I  K  P  S  A  G  Y  Q  T  C  G  G  R  S  K  Q  *  G  L  Q  E  N  E  S  S  R  Q  Q  Y  R  C  S  T  I  F  F  W  G  H  *  N  V  G  S  L  C  A  R  G  F  A  K  K  H  F  I  S  T  R  E  K  N  V  S  S  *  C  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0062L07.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61842" stop="61873"/>
                    <exon start="62075" stop="63527"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1485</number_coding_nucleotides>
                  <number_encoded_amino_acids>495</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SHSPNKAAESSPNMLQLIQKVDQSRECGSGAELGHSEKKASSRMPEAAENSDESVGHHLRSQSAFSQGYGLQLGPPSRRASVRTHSLTSQRPIQAFSSSHYSHATVDTGEKNQGPMHPPHQAPSVLSPSDPSQEGLKNIGFGIAGSTNNVTSMYAMPGNLSPAFDSHSGFPYRGGQLKIPNVARTTAQLPTNQSLSVSFDKHASSHTEKGDSCRGSANGQSVEASLLAGADKLQDKPILSADKSQLSNTNRTVESIFTNQVTSQEPVSVSQALVSGIGQQGTYSKMSSGIWGTFPPPQQAFGSQYSKDSSHIFQSHQMNIVESSLSAPGRQSDQYLNRGSFASQIGTSSVNSLVSSEGEEQRPKESHSQQISVTNVDHIQKMNDSQGREPFIKYILGGSAANAASMQRDIEAFGRTLKPNLSNQNYSLLNQVQAIKHVEVDPSNRDFKRMKVADSSTGAPQFSSGDTEMLGVSVPEDLQRSISSQQGRKMSPHDV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="64166" PGL_stop="68085"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64166" e_stop="64194"/>
            <exon e_start="64275" e_stop="64522"/>
            <exon e_start="64610" e_stop="64717"/>
            <exon e_start="67529" e_stop="68085"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="0.966"/>
          <exon-intron don_prob="0.979" acc_prob="0.992" e_score="0.992"/>
          <exon-intron don_prob="0.977" acc_prob="0.999" e_score="0.991"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.966">
            <gDNA_exon_boundary e_start="64166" e_stop="64194" e_length="29"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="64195" i_stop="64274" i_length="80"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="64275" e_stop="64522" e_length="248"/>
          </exon>
          <intron i_serial="2" don_prob="0.979" acc_prob="0.992">
            <gDNA_intron_boundary i_start="64523" i_stop="64609" i_length="87"/>
          </intron>
          <exon e_serial="3" e_score="0.991">
            <gDNA_exon_boundary e_start="64610" e_stop="64717" e_length="108"/>
          </exon>
          <intron i_serial="3" don_prob="0.977" acc_prob="0.999">
            <gDNA_intron_boundary i_start="64718" i_stop="67528" i_length="2811"/>
          </intron>
          <exon e_serial="4" e_score="0.996">
            <gDNA_exon_boundary e_start="67529" e_stop="68085" e_length="557"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64166" stop="64194"/>
              <exon start="64275" stop="64522"/>
              <exon start="64610" stop="64717"/>
              <exon start="67529" stop="68085"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U331862" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTAGAGCTGCTAATAGGCTTACTGAAAAG : GTTATAGAAGGCATTGGTTTTAATGAGGAAGGGGCCCCAGGGGTTAAAGCTAAAAGAAGGGCTATATTGACCACTCAGCTTATGCAGCAACTACTCCCCTCTCCCCCTGCAGCAATTCTTTCTGCAGAAGCTAATTCAGAGTATGAGAGTGTGGGTTACTCCATCTCTAGATCGTCATTGGGGGATGCATGCAGCATGCTTTCTTGCTCAAATGCTGATCGTAATATGCCTTGTGATGACAAAGAACT : GCTTCCCAAAGGGTGCATTACTTCTCAGAGGATTAATAAACATGATTTTGCCAAAACATTAGAAGAGTTACAGGGAAGAGCGAGGAGATTGGAAAGTGATTTTATGAG : ACTGGACAAGAGAGCATCGGTATTAGATGTGACAGTGGATGGGCAAGACCAAGAGAAGTTCGGCGTTATTAATCGGTATGCTAGGTTTCTTGGTCGGGCGCAATATGATGGTATTCCTCAGAGATACGTCACAGCGCTTCCAATACCAAAAGATCTGCCTAGTGGGGTGCACTGTCTTTCTCTATAATCACAAATCAATTGAATCTTTTCTGTGCTCTGTCATCAATTACCTCAACTTCCCGTAGACATTTTTGTCCTAGTCATGTACTAGTTCTAGCAAGAGCAAAATAGAACCACACAATCAGTATTGCTGAACATACTCAATTGTCATCTCAGATGGAACGTAGCTGTCCAATCTTTTGCATGTAGGCCATTTATGTCATTATCAAGAAAATATACATGTACATCTCTTCAAACTTAGTGAGGGGAGGTGAAACTAGGGTGCCCCATCATTTTTTGCCAGAAGTGGGGAGAGAATACATACTTCTGTGCTTCTAAGCTGTTGACATACAGTTGGCCATCATTATGTATAAGAGATGCCCAGGCGCTCATAATTG</gDNA_template>
            <first_frame> L  E  L  L  I  G  L  L  K  R :   L  *  K  A  L  V  L  M  R  K  G  P  Q  G  L  K  L  K  E  G  L  Y  *  P  L  S  L  C  S  N  Y  S  P  L  P  L  Q  Q  F  F  L  Q  K  L  I  Q  S  M  R  V  W  V  T  P  S  L  D  R  H  W  G  M  H  A  A  C  F  L  A  Q  M  L  I  V  I  C  L  V  M  T  K  N   : C  F  P  K  G  A  L  L  L  R  G  L  I  N  M  I  L  P  K  H  *  K  S  Y  R  E  E  R  G  D  W  K  V  I  L  *   : D  W  T  R  E  H  R  Y  *  M  *  Q  W  M  G  K  T  K  R  S  S  A  L  L  I  G  M  L  G  F  L  V  G  R  N  M  M  V  F  L  R  D  T  S  Q  R  F  Q  Y  Q  K  I  C  L  V  G  C  T  V  F  L  Y  N  H  K  S  I  E  S  F  L  C  S  V  I  N  Y  L  N  F  P  *  T  F  L  S  *  S  C  T  S  S  S  K  S  K  I  E  P  H  N  Q  Y  C  *  T  Y  S  I  V  I  S  D  G  T  *  L  S  N  L  L  H  V  G  H  L  C  H  Y  Q  E  N  I  H  V  H  L  F  K  L  S  E  G  R  *  N  *  G  A  P  S  F  F  A  R  S  G  E  R  I  H  T  S  V  L  L  S  C  *  H  T  V  G  H  H  Y  V  *  E  M  P  R  R  S  *  L </first_frame>
            <second_frame>  *  S  C  *  *  A  Y  *  K   : G  Y  R  R  H  W  F  *  *  G  R  G  P  R  G  *  S  *  K  K  G  Y  I  D  H  S  A  Y  A  A  T  T  P  L  S  P  C  S  N  S  F  C  R  S  *  F  R  V  *  E  C  G  L  L  H  L  *  I  V  I  G  G  C  M  Q  H  A  F  L  L  K  C  *  S  *  Y  A  L  *  *  Q  R  T  :  A  S  Q  R  V  H  Y  F  S  E  D  *  *  T  *  F  C  Q  N  I  R  R  V  T  G  K  S  E  E  I  G  K  *  F  Y  E  :  T  G  Q  E  S  I  G  I  R  C  D  S  G  W  A  R  P  R  E  V  R  R  Y  *  S  V  C  *  V  S  W  S  G  A  I  *  W  Y  S  S  E  I  R  H  S  A  S  N  T  K  R  S  A  *  W  G  A  L  S  F  S  I  I  T  N  Q  L  N  L  F  C  A  L  S  S  I  T  S  T  S  R  R  H  F  C  P  S  H  V  L  V  L  A  R  A  K  *  N  H  T  I  S  I  A  E  H  T  Q  L  S  S  Q  M  E  R  S  C  P  I  F  C  M  *  A  I  Y  V  I  I  K  K  I  Y  M  Y  I  S  S  N  L  V  R  G  G  E  T  R  V  P  H  H  F  L  P  E  V  G  R  E  Y  I  L  L  C  F  *  A  V  D  I  Q  L  A  I  I  M  Y  K  R  C  P  G  A  H  N   </second_frame>
            <third_frame>   R  A  A  N  R  L  T  E  K  :  V  I  E  G  I  G  F  N  E  E  G  A  P  G  V  K  A  K  R  R  A  I  L  T  T  Q  L  M  Q  Q  L  L  P  S  P  P  A  A  I  L  S  A  E  A  N  S  E  Y  E  S  V  G  Y  S  I  S  R  S  S  L  G  D  A  C  S  M  L  S  C  S  N  A  D  R  N  M  P  C  D  D  K  E  L :   L  P  K  G  C  I  T  S  Q  R  I  N  K  H  D  F  A  K  T  L  E  E  L  Q  G  R  A  R  R  L  E  S  D  F  M  R :   L  D  K  R  A  S  V  L  D  V  T  V  D  G  Q  D  Q  E  K  F  G  V  I  N  R  Y  A  R  F  L  G  R  A  Q  Y  D  G  I  P  Q  R  Y  V  T  A  L  P  I  P  K  D  L  P  S  G  V  H  C  L  S  L  *  S  Q  I  N  *  I  F  S  V  L  C  H  Q  L  P  Q  L  P  V  D  I  F  V  L  V  M  Y  *  F  *  Q  E  Q  N  R  T  T  Q  S  V  L  L  N  I  L  N  C  H  L  R  W  N  V  A  V  Q  S  F  A  C  R  P  F  M  S  L  S  R  K  Y  T  C  T  S  L  Q  T  *  *  G  E  V  K  L  G  C  P  I  I  F  C  Q  K  W  G  E  N  T  Y  F  C  A  S  K  L  L  T  Y  S  W  P  S  L  C  I  R  D  A  Q  A  L  I  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0062L07.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64168" stop="64194"/>
                    <exon start="64275" stop="64522"/>
                    <exon start="64610" stop="64717"/>
                    <exon start="67529" stop="67715"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>567</number_coding_nucleotides>
                  <number_encoded_amino_acids>189</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RAANRLTEKVIEGIGFNEEGAPGVKAKRRAILTTQLMQQLLPSPPAAILSAEANSEYESVGYSISRSSLGDACSMLSCSNADRNMPCDDKELLPKGCITSQRINKHDFAKTLEELQGRARRLESDFMRLDKRASVLDVTVDGQDQEKFGVINRYARFLGRAQYDGIPQRYVTALPIPKDLPSGVHCLSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="83157" PGL_stop="80494"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="83157" e_stop="82817"/>
            <exon e_start="82732" e_stop="82679"/>
            <exon e_start="82441" e_stop="82308"/>
            <exon e_start="82214" e_stop="81914"/>
            <exon e_start="81351" e_stop="81280"/>
            <exon e_start="80899" e_stop="80834"/>
            <exon e_start="80749" e_stop="80494"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.964" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.919" e_score="1.000"/>
          <exon-intron don_prob="0.905" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.965" e_score="0.993"/>
          <exon-intron don_prob="0.988" acc_prob="1.000" e_score="0.986"/>
          <exon-intron don_prob="0.999" acc_prob="0.943" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="83157" e_stop="82817" e_length="341"/>
          </exon>
          <intron i_serial="1" don_prob="0.964" acc_prob="0.998">
            <gDNA_intron_boundary i_start="82816" i_stop="82733" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="82732" e_stop="82679" e_length="54"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.919">
            <gDNA_intron_boundary i_start="82678" i_stop="82442" i_length="237"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="82441" e_stop="82308" e_length="134"/>
          </exon>
          <intron i_serial="3" don_prob="0.905" acc_prob="1.000">
            <gDNA_intron_boundary i_start="82307" i_stop="82215" i_length="93"/>
          </intron>
          <exon e_serial="4" e_score="0.993">
            <gDNA_exon_boundary e_start="82214" e_stop="81914" e_length="301"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.965">
            <gDNA_intron_boundary i_start="81913" i_stop="81352" i_length="562"/>
          </intron>
          <exon e_serial="5" e_score="0.986">
            <gDNA_exon_boundary e_start="81351" e_stop="81280" e_length="72"/>
          </exon>
          <intron i_serial="5" don_prob="0.988" acc_prob="1.000">
            <gDNA_intron_boundary i_start="81279" i_stop="80900" i_length="380"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="80899" e_stop="80834" e_length="66"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.943">
            <gDNA_intron_boundary i_start="80833" i_stop="80750" i_length="84"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="80749" e_stop="80494" e_length="256"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83157" stop="82817"/>
              <exon start="82732" stop="82679"/>
              <exon start="82441" stop="82308"/>
              <exon start="82214" stop="81914"/>
              <exon start="81351" stop="81280"/>
              <exon start="80899" stop="80834"/>
              <exon start="80749" stop="80494"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318489" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCTGCCTCTGCCAGCTTAAATCGCATCGTCCCCCTTCTCCCTCGTGTGTATCGCCCCCCTCCCTTTTCTCCAATTTCGGATTTTCCCCTGCTAAATCTCATCAATTTTACCGTCCAATTCTCTTCTACAAAACCCCCCATCAAGCTCCCAATTTCCCTCATAGCCATACAGACAAAATTACAATATTTTCTTGAAAAATCTGGCAATGGCTTCTTTCAGTGTCCCTTGTCCTAAGATTTCTGTCCTCTCTGTTGCTTCATCATCCAATTTAAGCTCGACCCATCAGCCCCAGAGCTCCCTTTCCTTCAGATCCGGTCCTGCATTGCTCCCTCGTATTCAG : GGGTCCAGTCGCATCCAATCTCAGGTGTTTAAGGTGAATGCCCAGCTGAATGAG : GTTGCTATTGACAAGTCGAACAATTCAAAACCTGTCTCTGAGAAAAGCTTGGAGGAAGTCTCCAAGACTGAATACAGTATTCCAGATGCTTCATCCATTCAAGCATTCATGTCTCAGGCAGCTGATCTTGTGGA : GCTTGTGGATTCAAGGGACATTGTGGAGCTGCAGCTAAAGCAAAACAATTGTGAAATTCTTATAAGGAAGAAGGCGGCATTGCCCCAGCCGCCTGTTTATATGGCCTCACCATCTGTTCCACAGGCCTTTGTTCAGCAACAGTTGCCTCCTGCAAGTGCCCCTGCTCCTGCAGCTCCAGCAGTTGCTGCACTTCCTCCACCTGCACCTTCAAAGCCTAAATCCTCACATCCTCCAATGAAATGTCCCATGGCCGGAACATTCTATCGATCACCTGCCCCAGGGGCAGCACCTTTTGTTAAG : GTAGGTGACAAGGTCCAGAAAGGGCAAGTGGTCTGCATTATTGAGGCTATGAAATTGATGAATGAAATTGAG : GCTGATCAAGCTGGAACCATAGTTGACATAGTTGCAGAGGATGGTAAGCCCGTTAGTGTGGACACG : CCTCTATTTGTCATTGAACCATGATAGAAAGAAGTAATCTTGGTGTGCAACATAGGTGGATGAAGCAGAGTGAAATTCAAAAGTTATAGAGAGCAAATCTGTCTTAAGCTCAAGGCATATCTGCTCAGAAGATTGGTTCACTATTACTCTTGTTGAAATCTATGATCATATTTATAGCTTGTATTACTCATTTTCCTTATGCTGCTCATAAATTTTGGAACTATATTTTCTTTATAAAGTTGTGACTTGATGATAA</gDNA_template>
            <first_frame> I  C  L  C  Q  L  K  S  H  R  P  P  S  P  S  C  V  S  P  P  S  L  F  S  N  F  G  F  S  P  A  K  S  H  Q  F  Y  R  P  I  L  F  Y  K  T  P  H  Q  A  P  N  F  P  H  S  H  T  D  K  I  T  I  F  S  *  K  I  W  Q  W  L  L  S  V  S  L  V  L  R  F  L  S  S  L  L  L  H  H  P  I  *  A  R  P  I  S  P  R  A  P  F  P  S  D  P  V  L  H  C  S  L  V  F  R :   G  P  V  A  S  N  L  R  C  L  R  *  M  P  S  *  M  R :   L  L  L  T  S  R  T  I  Q  N  L  S  L  R  K  A  W  R  K  S  P  R  L  N  T  V  F  Q  M  L  H  P  F  K  H  S  C  L  R  Q  L  I  L  W   : S  L  W  I  Q  G  T  L  W  S  C  S  *  S  K  T  I  V  K  F  L  *  G  R  R  R  H  C  P  S  R  L  F  I  W  P  H  H  L  F  H  R  P  L  F  S  N  S  C  L  L  Q  V  P  L  L  L  Q  L  Q  Q  L  L  H  F  L  H  L  H  L  Q  S  L  N  P  H  I  L  Q  *  N  V  P  W  P  E  H  S  I  D  H  L  P  Q  G  Q  H  L  L  L  R :   *  V  T  R  S  R  K  G  K  W  S  A  L  L  R  L  *  N  *  *  M  K  L  R :   L  I  K  L  E  P  *  L  T  *  L  Q  R  M  V  S  P  L  V  W  T  R :   L  Y  L  S  L  N  H  D  R  K  K  *  S  W  C  A  T  *  V  D  E  A  E  *  N  S  K  V  I  E  S  K  S  V  L  S  S  R  H  I  C  S  E  D  W  F  T  I  T  L  V  E  I  Y  D  H  I  Y  S  L  Y  Y  S  F  S  L  C  C  S  *  I  L  E  L  Y  F  L  Y  K  V  V  T  *  *  * </first_frame>
            <second_frame>  S  A  S  A  S  L  N  R  I  V  P  L  L  P  R  V  Y  R  P  P  P  F  S  P  I  S  D  F  P  L  L  N  L  I  N  F  T  V  Q  F  S  S  T  K  P  P  I  K  L  P  I  S  L  I  A  I  Q  T  K  L  Q  Y  F  L  E  K  S  G  N  G  F  F  Q  C  P  L  S  *  D  F  C  P  L  C  C  F  I  I  Q  F  K  L  D  P  S  A  P  E  L  P  F  L  Q  I  R  S  C  I  A  P  S  Y  S   : G  V  Q  S  H  P  I  S  G  V  *  G  E  C  P  A  E  *   : G  C  Y  *  Q  V  E  Q  F  K  T  C  L  *  E  K  L  G  G  S  L  Q  D  *  I  Q  Y  S  R  C  F  I  H  S  S  I  H  V  S  G  S  *  S  C  G  :  A  C  G  F  K  G  H  C  G  A  A  A  K  A  K  Q  L  *  N  S  Y  K  E  E  G  G  I  A  P  A  A  C  L  Y  G  L  T  I  C  S  T  G  L  C  S  A  T  V  A  S  C  K  C  P  C  S  C  S  S  S  S  C  C  T  S  S  T  C  T  F  K  A  *  I  L  T  S  S  N  E  M  S  H  G  R  N  I  L  S  I  T  C  P  R  G  S  T  F  C  *   : G  R  *  Q  G  P  E  R  A  S  G  L  H  Y  *  G  Y  E  I  D  E  *  N  *   : G  *  S  S  W  N  H  S  *  H  S  C  R  G  W  *  A  R  *  C  G  H   : A  S  I  C  H  *  T  M  I  E  R  S  N  L  G  V  Q  H  R  W  M  K  Q  S  E  I  Q  K  L  *  R  A  N  L  S  *  A  Q  G  I  S  A  Q  K  I  G  S  L  L  L  L  L  K  S  M  I  I  F  I  A  C  I  T  H  F  P  Y  A  A  H  K  F  W  N  Y  I  F  F  I  K  L  *  L  D  D   </second_frame>
            <third_frame>   L  P  L  P  A  *  I  A  S  S  P  F  S  L  V  C  I  A  P  L  P  F  L  Q  F  R  I  F  P  C  *  I  S  S  I  L  P  S  N  S  L  L  Q  N  P  P  S  S  S  Q  F  P  S  *  P  Y  R  Q  N  Y  N  I  F  L  K  N  L  A  M  A  S  F  S  V  P  C  P  K  I  S  V  L  S  V  A  S  S  S  N  L  S  S  T  H  Q  P  Q  S  S  L  S  F  R  S  G  P  A  L  L  P  R  I  Q  :  G  S  S  R  I  Q  S  Q  V  F  K  V  N  A  Q  L  N  E  :  V  A  I  D  K  S  N  N  S  K  P  V  S  E  K  S  L  E  E  V  S  K  T  E  Y  S  I  P  D  A  S  S  I  Q  A  F  M  S  Q  A  A  D  L  V  E :   L  V  D  S  R  D  I  V  E  L  Q  L  K  Q  N  N  C  E  I  L  I  R  K  K  A  A  L  P  Q  P  P  V  Y  M  A  S  P  S  V  P  Q  A  F  V  Q  Q  Q  L  P  P  A  S  A  P  A  P  A  A  P  A  V  A  A  L  P  P  P  A  P  S  K  P  K  S  S  H  P  P  M  K  C  P  M  A  G  T  F  Y  R  S  P  A  P  G  A  A  P  F  V  K  :  V  G  D  K  V  Q  K  G  Q  V  V  C  I  I  E  A  M  K  L  M  N  E  I  E  :  A  D  Q  A  G  T  I  V  D  I  V  A  E  D  G  K  P  V  S  V  D  T  :  P  L  F  V  I  E  P  *  *  K  E  V  I  L  V  C  N  I  G  G  *  S  R  V  K  F  K  S  Y  R  E  Q  I  C  L  K  L  K  A  Y  L  L  R  R  L  V  H  Y  Y  S  C  *  N  L  *  S  Y  L  *  L  V  L  L  I  F  L  M  L  L  I  N  F  G  T  I  F  S  L  *  S  C  D  L  M  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0062L07.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82993" stop="82817"/>
                    <exon start="82732" stop="82679"/>
                    <exon start="82441" stop="82308"/>
                    <exon start="82214" stop="81914"/>
                    <exon start="81351" stop="81280"/>
                    <exon start="80899" stop="80834"/>
                    <exon start="80749" stop="80726"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>825</number_coding_nucleotides>
                  <number_encoded_amino_acids>275</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PYRQNYNIFLKNLAMASFSVPCPKISVLSVASSSNLSSTHQPQSSLSFRSGPALLPRIQGSSRIQSQVFKVNAQLNEVAIDKSNNSKPVSEKSLEEVSKTEYSIPDASSIQAFMSQAADLVELVDSRDIVELQLKQNNCEILIRKKAALPQPPVYMASPSVPQAFVQQQLPPASAPAPAAPAVAALPPPAPSKPKSSHPPMKCPMAGTFYRSPAPGAAPFVKVGDKVQKGQVVCIIEAMKLMNEIEADQAGTIVDIVAEDGKPVSVDTPLFVIEP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0062L07.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83157" stop="82963"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ICLCQLKSHRPPSPSCVSPPSLFSNFGFSPAKSHQFYRPILFYKTPHQAPNFPHSHTDKITIFS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="90579" PGL_stop="91326"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90579" e_stop="91326"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="90579" e_stop="91326" e_length="748"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90579" stop="91326"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U324399" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGTGAATGCAATGGTCTCAAAGAAGTTGCTAACTACTGGAAACAAGTGATTCAGGTGAATGACTACCAAAAGAATCGGTTTGTTAACCGAGTTGTCTCCTCTATGTTCAACACAGTTTCAGGCAAGAAGATTGCTATCCTTGGATTTGCTTTCAAGAAAGATACAGGTGACACTAGAGAGACACCAGCAATTGATGTGTGCAAAGGCCTATTGGGAGACAATGCTAACTTGAGCATATATGATCCACAGGTCACTGAGGATCAAATCCGAAAGGATCTGTCAATGAAAAAGTTTGATTGGGATAATCCAATTCACCTCCAGCCAATGAGCCCCACTGTGATGAAGCAACTCAATGTAGTATGGGATGCTTATGCAGCCACAAAAGGCGCCCACGGCCTCTGTCTTTTGACCGAGTGGGATGAGTTCAAGACTCTTGATTTCAAGAAGATTTATGATAACATGCAAAAACCTGCATTTGTGTTTGATGGAAGGAACATTGTTGATGAACAGAAGCTCAGAGAAATCGGGTTCATCGTCTACTCCATTGGGAAACCTTTAGATGGATGGCTCAAGGATATGCCTGCTGTGGCATAACCCCCCTGGAATAAGCACTGAACATGAGAGCAAAATCTATTTATATTTTTCCAGTTCTTGTCTTTTCCATTCAAGCTTACAATTGTTGTTTCCTAGTAGCATTGTTAAAAATGCTTACCTTTATATCATGTTTTTTTTGTGTGTGAACTTCAG</gDNA_template>
            <first_frame> L  *  M  Q  W  S  Q  R  S  C  *  L  L  E  T  S  D  S  G  E  *  L  P  K  E  S  V  C  *  P  S  C  L  L  Y  V  Q  H  S  F  R  Q  E  D  C  Y  P  W  I  C  F  Q  E  R  Y  R  *  H  *  R  D  T  S  N  *  C  V  Q  R  P  I  G  R  Q  C  *  L  E  H  I  *  S  T  G  H  *  G  S  N  P  K  G  S  V  N  E  K  V  *  L  G  *  S  N  S  P  P  A  N  E  P  H  C  D  E  A  T  Q  C  S  M  G  C  L  C  S  H  K  R  R  P  R  P  L  S  F  D  R  V  G  *  V  Q  D  S  *  F  Q  E  D  L  *  *  H  A  K  T  C  I  C  V  *  W  K  E  H  C  *  *  T  E  A  Q  R  N  R  V  H  R  L  L  H  W  E  T  F  R  W  M  A  Q  G  Y  A  C  C  G  I  T  P  L  E  *  A  L  N  M  R  A  K  S  I  Y  I  F  P  V  L  V  F  S  I  Q  A  Y  N  C  C  F  L  V  A  L  L  K  M  L  T  F  I  S  C  F  F  C  V  *  T  S  </first_frame>
            <second_frame>  C  E  C  N  G  L  K  E  V  A  N  Y  W  K  Q  V  I  Q  V  N  D  Y  Q  K  N  R  F  V  N  R  V  V  S  S  M  F  N  T  V  S  G  K  K  I  A  I  L  G  F  A  F  K  K  D  T  G  D  T  R  E  T  P  A  I  D  V  C  K  G  L  L  G  D  N  A  N  L  S  I  Y  D  P  Q  V  T  E  D  Q  I  R  K  D  L  S  M  K  K  F  D  W  D  N  P  I  H  L  Q  P  M  S  P  T  V  M  K  Q  L  N  V  V  W  D  A  Y  A  A  T  K  G  A  H  G  L  C  L  L  T  E  W  D  E  F  K  T  L  D  F  K  K  I  Y  D  N  M  Q  K  P  A  F  V  F  D  G  R  N  I  V  D  E  Q  K  L  R  E  I  G  F  I  V  Y  S  I  G  K  P  L  D  G  W  L  K  D  M  P  A  V  A  *  P  P  W  N  K  H  *  T  *  E  Q  N  L  F  I  F  F  Q  F  L  S  F  P  F  K  L  T  I  V  V  S  *  *  H  C  *  K  C  L  P  L  Y  H  V  F  F  V  C  E  L  Q </second_frame>
            <third_frame>   V  N  A  M  V  S  K  K  L  L  T  T  G  N  K  *  F  R  *  M  T  T  K  R  I  G  L  L  T  E  L  S  P  L  C  S  T  Q  F  Q  A  R  R  L  L  S  L  D  L  L  S  R  K  I  Q  V  T  L  E  R  H  Q  Q  L  M  C  A  K  A  Y  W  E  T  M  L  T  *  A  Y  M  I  H  R  S  L  R  I  K  S  E  R  I  C  Q  *  K  S  L  I  G  I  I  Q  F  T  S  S  Q  *  A  P  L  *  *  S  N  S  M  *  Y  G  M  L  M  Q  P  Q  K  A  P  T  A  S  V  F  *  P  S  G  M  S  S  R  L  L  I  S  R  R  F  M  I  T  C  K  N  L  H  L  C  L  M  E  G  T  L  L  M  N  R  S  S  E  K  S  G  S  S  S  T  P  L  G  N  L  *  M  D  G  S  R  I  C  L  L  W  H  N  P  P  G  I  S  T  E  H  E  S  K  I  Y  L  Y  F  S  S  S  C  L  F  H  S  S  L  Q  L  L  F  P  S  S  I  V  K  N  A  Y  L  Y  I  M  F  F  L  C  V  N  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0062L07.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90580" stop="91173"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>591</number_coding_nucleotides>
                  <number_encoded_amino_acids>197</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CECNGLKEVANYWKQVIQVNDYQKNRFVNRVVSSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCKGLLGDNANLSIYDPQVTEDQIRKDLSMKKFDWDNPIHLQPMSPTVMKQLNVVWDAYAATKGAHGLCLLTEWDEFKTLDFKKIYDNMQKPAFVFDGRNIVDEQKLREIGFIVYSIGKPLDGWLKDMPAVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="94236" PGL_stop="96208"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="94236" e_stop="94391"/>
            <exon e_start="95477" e_stop="95624"/>
            <exon e_start="95841" e_stop="96208"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.687" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="94236" e_stop="94391" e_length="156"/>
          </exon>
          <intron i_serial="1" don_prob="0.687" acc_prob="0.981">
            <gDNA_intron_boundary i_start="94392" i_stop="95476" i_length="1085"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="95477" e_stop="95624" e_length="148"/>
          </exon>
          <intron i_serial="2" don_prob="0.981" acc_prob="0.999">
            <gDNA_intron_boundary i_start="95625" i_stop="95840" i_length="216"/>
          </intron>
          <exon e_serial="3" e_score="0.986">
            <gDNA_exon_boundary e_start="95841" e_stop="96208" e_length="368"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94236" stop="94391"/>
              <exon start="95477" stop="95624"/>
              <exon start="95841" stop="96208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U333237" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTTCCCCAAAATCAATTTCTCATCTTCTACCCCTTTAATCGACCTTGATTTTTCTTCTTGAAGATCAAATCAACCTCCGATACTTCTAATTCGTTTCATTCTCTATCGATTGGTACCTCTTTTGGATCTATCCGTCTGGAAATCGAATTCCGAG : TTAAATATGGTGCAAAAAAGACCATACAGTGAAGAAAAGTTGTATGAGGTTTCATCTAAGCAGCCGAGACATGTAGAACCGAGTACTCAGCTAGTTTCCTTTTTGCAGTTTCCGTGTGAATCAGTGGCTCCCAACTCTTACACTTCAG : GTGGCGATGAGGAGAAATTTTCAGAAGTCAGAGCTTTTAGTGAGAAAAGACCTGATAGTTGCGATGTGACTGCTGTCCCTGTTTCTTCAGAGAAAGCAATTGAGACGAGCATCCATGGCTCTGCTTCAAACTCTTCTTGGACCTCTAGTAGCACCAGCGAAGAAGACATTAGGTCCGAGGTGCCTTTTCATGTATTGACGGCTTCTAAATATTACAGTAGTGATCCTCCATTCCGAGTTGTTATTCATCCAATGGAGGTCTATTCCCCTCTTTTCAACAATCCTCCTCGGAAATCGGTTCCCATTGGACCAGATTTCCAAGCCGAATTACCAGAATGGGGTGCATATGATAGTAAAAATATATCCGTG</gDNA_template>
            <first_frame> F  F  P  K  I  N  F  S  S  S  T  P  L  I  D  L  D  F  S  S  *  R  S  N  Q  P  P  I  L  L  I  R  F  I  L  Y  R  L  V  P  L  L  D  L  S  V  W  K  S  N  S  E  :  L  N  M  V  Q  K  R  P  Y  S  E  E  K  L  Y  E  V  S  S  K  Q  P  R  H  V  E  P  S  T  Q  L  V  S  F  L  Q  F  P  C  E  S  V  A  P  N  S  Y  T  S   : G  G  D  E  E  K  F  S  E  V  R  A  F  S  E  K  R  P  D  S  C  D  V  T  A  V  P  V  S  S  E  K  A  I  E  T  S  I  H  G  S  A  S  N  S  S  W  T  S  S  S  T  S  E  E  D  I  R  S  E  V  P  F  H  V  L  T  A  S  K  Y  Y  S  S  D  P  P  F  R  V  V  I  H  P  M  E  V  Y  S  P  L  F  N  N  P  P  R  K  S  V  P  I  G  P  D  F  Q  A  E  L  P  E  W  G  A  Y  D  S  K  N  I  S  V </first_frame>
            <second_frame>  F  S  P  K  S  I  S  H  L  L  P  L  *  S  T  L  I  F  L  L  E  D  Q  I  N  L  R  Y  F  *  F  V  S  F  S  I  D  W  Y  L  F  W  I  Y  P  S  G  N  R  I  P  S :   *  I  W  C  K  K  D  H  T  V  K  K  S  C  M  R  F  H  L  S  S  R  D  M  *  N  R  V  L  S  *  F  P  F  C  S  F  R  V  N  Q  W  L  P  T  L  T  L  Q  :  V  A  M  R  R  N  F  Q  K  S  E  L  L  V  R  K  D  L  I  V  A  M  *  L  L  S  L  F  L  Q  R  K  Q  L  R  R  A  S  M  A  L  L  Q  T  L  L  G  P  L  V  A  P  A  K  K  T  L  G  P  R  C  L  F  M  Y  *  R  L  L  N  I  T  V  V  I  L  H  S  E  L  L  F  I  Q  W  R  S  I  P  L  F  S  T  I  L  L  G  N  R  F  P  L  D  Q  I  S  K  P  N  Y  Q  N  G  V  H  M  I  V  K  I  Y  P   </second_frame>
            <third_frame>   F  P  Q  N  Q  F  L  I  F  Y  P  F  N  R  P  *  F  F  F  L  K  I  K  S  T  S  D  T  S  N  S  F  H  S  L  S  I  G  T  S  F  G  S  I  R  L  E  I  E  F  R   : V  K  Y  G  A  K  K  T  I  Q  *  R  K  V  V  *  G  F  I  *  A  A  E  T  C  R  T  E  Y  S  A  S  F  L  F  A  V  S  V  *  I  S  G  S  Q  L  L  H  F  R :   W  R  *  G  E  I  F  R  S  Q  S  F  *  *  E  K  T  *  *  L  R  C  D  C  C  P  C  F  F  R  E  S  N  *  D  E  H  P  W  L  C  F  K  L  F  L  D  L  *  *  H  Q  R  R  R  H  *  V  R  G  A  F  S  C  I  D  G  F  *  I  L  Q  *  *  S  S  I  P  S  C  Y  S  S  N  G  G  L  F  P  S  F  Q  Q  S  S  S  E  I  G  S  H  W  T  R  F  P  S  R  I  T  R  M  G  C  I  *  *  *  K  Y  I  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0062L07.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94299" stop="94391"/>
                    <exon start="95477" stop="95624"/>
                    <exon start="95841" stop="96208"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>609</number_coding_nucleotides>
                  <number_encoded_amino_acids>203</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSNQPPILLIRFILYRLVPLLDLSVWKSNSELNMVQKRPYSEEKLYEVSSKQPRHVEPSTQLVSFLQFPCESVAPNSYTSGGDEEKFSEVRAFSEKRPDSCDVTAVPVSSEKAIETSIHGSASNSSWTSSSTSEEDIRSEVPFHVLTASKYYSSDPPFRVVIHPMEVYSPLFNNPPRKSVPIGPDFQAELPEWGAYDSKNISV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="96367" PGL_stop="97593"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="96367" e_stop="97593"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="96367" e_stop="97593" e_length="1227"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96367" stop="97593"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326618" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGAATTGGGTGCTCCTGTGGAGATGCTGGTTCCTTTGGATGTGTTCGGTTGCACATCATGGAAGCAAGGGAGAAACTTAAGGCGGCCTTGGGTGAGGAAACATTTGTTAGGTTGGGTGTTTATGATATGGGAGAGATAGTGGCAGAGAAATGGAGTGAAGAGGAAGAGGAATTATTTCATGAAGTTGTATTTTCCAATCCTGCAGCATTAGGCAAGAATTTCTGGGACCACCTTGCTGTTGAATTTCCTTCACGGAGCAAGAGAGATCTTGTTAGCTATTACTTCAATGTCTTTATTTTGCGGAAGCGTGCCAAGCAGAATAGGTTTGACCCATCAAATATAGACAGTGATAACGATGAATGGCAGGAGATTGATGATGATGTTGTTGCTACGGGAGCTCAAATGACAGATGACGACGAGGATTCTGTGGTTGAATCACCAATATATCAAAATTATCCTGGTCACAATGAGATATATGTGACTGAAAAACAAGCATATGATGAAGAAGCTGGTGTTGCAACCTTGGAAGATTATCAGACGATAAATTTTTGCAGGAGGAAGGTCTTGAGTGATGTGTCAAAAGCATGTCCTGATGAATTGATTGATAATAACAGTAGTTGTGGTCACAATATTCAGCCTCTAGACAGACATCATTCAAATGAAGTGGGTAACCATGATGTTGAAGATAACTCTTGTACCACTGATGCAGCTGGGGCTTCTTCAGATACACCACAGGTAAAAACTGATGATTGTAAACACTGGGCAAGTCATTTTGCTGGTGTTGGCATTGACAGTGGGCATGATTTTGTGATGGAGCCATCTAATGGTAAAGAATGGGATATGGGAGGGTACTTGAGCTGTCCTAAGAATGAAGTTGATTTGTTACCAACTTGCTCTATGATTGAGGAAGTGTTTGGAGACGAAGCCTGGAGTTCCAAGCACAGAGATGGTCACAGTTTAAGCAAGCATTGACCTGTTGCATATGATACCCGTTTATTTTTTGCCGTTGGATCATCCTTGGAACACTTCTTGCAAAAGTGAGATCCATTTTTACTTGTATATTATTTAGTGGTGAAAGGACAGAGCATGTTAGGGATAAAAGTTGAGATTTTCGACCTTGCTCTTGGTTGTTAGTAGGAAGCTGTTTTGAGGTAGGCGGTTAGGATTAATTTATATGTAAATTATATGGCCGAGTTGAGCCATCTTTCGACAAATGAAAAAAAAAA</gDNA_template>
            <first_frame> K  N  W  V  L  L  W  R  C  W  F  L  W  M  C  S  V  A  H  H  G  S  K  G  E  T  *  G  G  L  G  *  G  N  I  C  *  V  G  C  L  *  Y  G  R  D  S  G  R  E  M  E  *  R  G  R  G  I  I  S  *  S  C  I  F  Q  S  C  S  I  R  Q  E  F  L  G  P  P  C  C  *  I  S  F  T  E  Q  E  R  S  C  *  L  L  L  Q  C  L  Y  F  A  E  A  C  Q  A  E  *  V  *  P  I  K  Y  R  Q  *  *  R  *  M  A  G  D  *  *  *  C  C  C  Y  G  S  S  N  D  R  *  R  R  G  F  C  G  *  I  T  N  I  S  K  L  S  W  S  Q  *  D  I  C  D  *  K  T  S  I  *  *  R  S  W  C  C  N  L  G  R  L  S  D  D  K  F  L  Q  E  E  G  L  E  *  C  V  K  S  M  S  *  *  I  D  *  *  *  Q  *  L  W  S  Q  Y  S  A  S  R  Q  T  S  F  K  *  S  G  *  P  *  C  *  R  *  L  L  Y  H  *  C  S  W  G  F  F  R  Y  T  T  G  K  N  *  *  L  *  T  L  G  K  S  F  C  W  C  W  H  *  Q  W  A  *  F  C  D  G  A  I  *  W  *  R  M  G  Y  G  R  V  L  E  L  S  *  E  *  S  *  F  V  T  N  L  L  Y  D  *  G  S  V  W  R  R  S  L  E  F  Q  A  Q  R  W  S  Q  F  K  Q  A  L  T  C  C  I  *  Y  P  F  I  F  C  R  W  I  I  L  G  T  L  L  A  K  V  R  S  I  F  T  C  I  L  F  S  G  E  R  T  E  H  V  R  D  K  S  *  D  F  R  P  C  S  W  L  L  V  G  S  C  F  E  V  G  G  *  D  *  F  I  C  K  L  Y  G  R  V  E  P  S  F  D  K  *  K  K  K </first_frame>
            <second_frame>  R  I  G  C  S  C  G  D  A  G  S  F  G  C  V  R  L  H  I  M  E  A  R  E  K  L  K  A  A  L  G  E  E  T  F  V  R  L  G  V  Y  D  M  G  E  I  V  A  E  K  W  S  E  E  E  E  E  L  F  H  E  V  V  F  S  N  P  A  A  L  G  K  N  F  W  D  H  L  A  V  E  F  P  S  R  S  K  R  D  L  V  S  Y  Y  F  N  V  F  I  L  R  K  R  A  K  Q  N  R  F  D  P  S  N  I  D  S  D  N  D  E  W  Q  E  I  D  D  D  V  V  A  T  G  A  Q  M  T  D  D  D  E  D  S  V  V  E  S  P  I  Y  Q  N  Y  P  G  H  N  E  I  Y  V  T  E  K  Q  A  Y  D  E  E  A  G  V  A  T  L  E  D  Y  Q  T  I  N  F  C  R  R  K  V  L  S  D  V  S  K  A  C  P  D  E  L  I  D  N  N  S  S  C  G  H  N  I  Q  P  L  D  R  H  H  S  N  E  V  G  N  H  D  V  E  D  N  S  C  T  T  D  A  A  G  A  S  S  D  T  P  Q  V  K  T  D  D  C  K  H  W  A  S  H  F  A  G  V  G  I  D  S  G  H  D  F  V  M  E  P  S  N  G  K  E  W  D  M  G  G  Y  L  S  C  P  K  N  E  V  D  L  L  P  T  C  S  M  I  E  E  V  F  G  D  E  A  W  S  S  K  H  R  D  G  H  S  L  S  K  H  *  P  V  A  Y  D  T  R  L  F  F  A  V  G  S  S  L  E  H  F  L  Q  K  *  D  P  F  L  L  V  Y  Y  L  V  V  K  G  Q  S  M  L  G  I  K  V  E  I  F  D  L  A  L  G  C  *  *  E  A  V  L  R  *  A  V  R  I  N  L  Y  V  N  Y  M  A  E  L  S  H  L  S  T  N  E  K  K   </second_frame>
            <third_frame>   E  L  G  A  P  V  E  M  L  V  P  L  D  V  F  G  C  T  S  W  K  Q  G  R  N  L  R  R  P  W  V  R  K  H  L  L  G  W  V  F  M  I  W  E  R  *  W  Q  R  N  G  V  K  R  K  R  N  Y  F  M  K  L  Y  F  P  I  L  Q  H  *  A  R  I  S  G  T  T  L  L  L  N  F  L  H  G  A  R  E  I  L  L  A  I  T  S  M  S  L  F  C  G  S  V  P  S  R  I  G  L  T  H  Q  I  *  T  V  I  T  M  N  G  R  R  L  M  M  M  L  L  L  R  E  L  K  *  Q  M  T  T  R  I  L  W  L  N  H  Q  Y  I  K  I  I  L  V  T  M  R  Y  M  *  L  K  N  K  H  M  M  K  K  L  V  L  Q  P  W  K  I  I  R  R  *  I  F  A  G  G  R  S  *  V  M  C  Q  K  H  V  L  M  N  *  L  I  I  T  V  V  V  V  T  I  F  S  L  *  T  D  I  I  Q  M  K  W  V  T  M  M  L  K  I  T  L  V  P  L  M  Q  L  G  L  L  Q  I  H  H  R  *  K  L  M  I  V  N  T  G  Q  V  I  L  L  V  L  A  L  T  V  G  M  I  L  *  W  S  H  L  M  V  K  N  G  I  W  E  G  T  *  A  V  L  R  M  K  L  I  C  Y  Q  L  A  L  *  L  R  K  C  L  E  T  K  P  G  V  P  S  T  E  M  V  T  V  *  A  S  I  D  L  L  H  M  I  P  V  Y  F  L  P  L  D  H  P  W  N  T  S  C  K  S  E  I  H  F  Y  L  Y  I  I  *  W  *  K  D  R  A  C  *  G  *  K  L  R  F  S  T  L  L  L  V  V  S  R  K  L  F  *  G  R  R  L  G  L  I  Y  M  *  I  I  W  P  S  *  A  I  F  R  Q  M  K  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06SLm0062L07.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96368" stop="97339"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>969</number_coding_nucleotides>
                  <number_encoded_amino_acids>323</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RIGCSCGDAGSFGCVRLHIMEAREKLKAALGEETFVRLGVYDMGEIVAEKWSEEEEELFHEVVFSNPAALGKNFWDHLAVEFPSRSKRDLVSYYFNVFILRKRAKQNRFDPSNIDSDNDEWQEIDDDVVATGAQMTDDDEDSVVESPIYQNYPGHNEIYVTEKQAYDEEAGVATLEDYQTINFCRRKVLSDVSKACPDELIDNNSSCGHNIQPLDRHHSNEVGNHDVEDNSCTTDAAGASSDTPQVKTDDCKHWASHFAGVGIDSGHDFVMEPSNGKEWDMGGYLSCPKNEVDLLPTCSMIEEVFGDEAWSSKHRDGHSLSKH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 20 chains have been computed
$ 
$ memory statistics:
$ 19264 bytes spliced alignments in total
$ 10 spliced alignments have been stored
$ 1926 bytes was the average size of a spliced alignment
$ 15992 bytes predicted gene locations in total
$ 9 predicted gene locations have been stored
$ 1776 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 21 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-14 17:44:38
-->
