<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 14:33:10"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E480247" ref_strand="+" ref_description="SGN-E480247 [cSTD-13-E4]">
      <seq>tggacaggtaaagtgtgaggagtggatccgagataatgacaccaaccattcggagcaatcaaagacatcttggtggttaaaccggctagtagggcgaaaaaagaaggtggattttgattggccattcccattttcagaggataggttatttgttctaactctcagtgccggttttgagggttatcacgtgaacgttgatgggaggcatgtgacctcatttccatatcgaattggatttgcgctcgaggattccactggtttgtctttgaatggtgacattgatgtcgattcagtctttgctgcctccttgcccacatcacatcctagttttgctcctcaaaggcatcttgatatgtcaaacagatggaaggcaccacccctccttgatcagcctgtggatctgttcattggcattctgtcggcaggcaatcactttgctgagcgaatggctataaggagggtcttggctgcagcatcagctaatcaaatcttcgaatgttgtggctcgattctttgtcgcattgcacgctaggaaaggatataacgtggagtttgaagaaagaagcagattcttttgtgacattgtcattgnttctttcatgggacattatgatccttgttgtcttgaaacagttgccatctgcgaatatggggtccacgtagcatttgcaaaaaaatcatgaagtgtgatgatgatacatttgttagagtggatgcagttatcaaggaaataaataagatacccga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="7903" stop="6283"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7603" g_stop="7372" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="232" r_length="232" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7371" i_stop="7290" i_length="82">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7289" g_stop="6999" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="524" r_length="292" r_score="0.962"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6998" i_stop="6890" i_length="109">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.996" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6889" g_stop="6761" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="653" r_length="129" r_score="0.876"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6760" i_stop="6678" i_length="83">
            <donor d_prob="0.139" d_score="0.90"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="6677" g_stop="6583" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="654" r_stop="747" r_length="94" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E480247" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>747</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E480247" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7603" e_stop="7372"/>
          <exon e_start="7289" e_stop="6999"/>
          <exon e_start="6889" e_stop="6761"/>
          <exon e_start="6677" e_stop="6583"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCCAGGTAAAGTGTGAGAAGTGGATCCGAGATAATGACACCAACCATTCGGAGCAATCAAAGGCATCTTGGTGGTTAAACCGGCTTGTAGGGCGAAAAAAGAAGGTCGATTTTGATTGGCCATTCCCATTTTCAGAGGATAGGTTATTTGTTCTAACTCTCAGTGCCGGTTTTGAGGGTTATCACGTGAACGTTGATGGGAGGCATGTGACCTCATTTCCATATCGAATTGTGAGTAATATACTACCACCTCTCCAGTTTCATGCTGAATTATTGAATTGAACTATAGAAGTTTACCAGTGATGCTTTTTAGGGATTTGCGCTCGAGGATGCCACTGGTTTGTCTTTGAATGGTGATATTGATGTCGATTCAGTCTTTGCTGCCTCCTTGCCCACATCACATCCTAGTTTTGCTCCTCAAAGGCATCTTGATATGTCAAATAGATGGAAGACACCACCCCTTCTTGATCAGCCTGTGGATCTGTTCATTGGCATTCTGTCGGCAGGCAATCACTTTGCTGAGCGAATGGCTATAAGGA-GGTCTTGGCTGCAGCACCAGCTCATCAAATCTTCGAATGTTGTGGCTCGATTTTTTGTCGCGTTGGTAGGTTGATAGATGGTAGCATATGCATCATTTTTGCGAATATAGTTTACTATTAACATTGGTGTTGCAGCTTGATAATTTGAGTTTAACTGGATTGGTTTTTTAATAGCACGCTAGG-AAGGATATAAACGTGGAG-TTGAAGAAAGAAGCACAATTCTTTGGTGACATTGTCATTGTTCCTTTCATGGACAATTATGAT-CTTGTTGTCTTGAAAACAGTTGCCATCTGCGAATATGGGGTGCGTTGTGGATTACCTATAAACATTGTTGTTGGTTGTCCCCAGCTTAACGTCATCCCAATATTGATATTTTCTTGTTGCAGGTCCATGTAGCATTTGCAAAAAATATCATGAAGTGTGATGATGATACATTTGTTAGAGTGGATGCGGTTATCAAGGAAATAAATAAGATACCCGA</genome_strand>
        <mrna_strand>TGGACAGGTAAAGTGTGAGGAGTGGATCCGAGATAATGACACCAACCATTCGGAGCAATCAAAGACATCTTGGTGGTTAAACCGGCTAGTAGGGCGAAAAAAGAAGGTGGATTTTGATTGGCCATTCCCATTTTCAGAGGATAGGTTATTTGTTCTAACTCTCAGTGCCGGTTTTGAGGGTTATCACGTGAACGTTGATGGGAGGCATGTGACCTCATTTCCATATCGAATT..................................................................................GGATTTGCGCTCGAGGATTCCACTGGTTTGTCTTTGAATGGTGACATTGATGTCGATTCAGTCTTTGCTGCCTCCTTGCCCACATCACATCCTAGTTTTGCTCCTCAAAGGCATCTTGATATGTCAAACAGATGGAAGGCACCACCCCTCCTTGATCAGCCTGTGGATCTGTTCATTGGCATTCTGTCGGCAGGCAATCACTTTGCTGAGCGAATGGCTATAAGGAGGGTCTTGGCTGCAGCATCAGCTAATCAAATCTTCGAATGTTGTGGCTCGATTCTTTGTCGCATTG.............................................................................................................CACGCTAGGAAAGGATAT-AACGTGGAGTTTGAAGAAAGAAGCA-GATTCTTTTGTGACATTGTCATTGNTTCTTTCATGGGACATTATGATCCTTGTTGTCTTG-AAACAGTTGCCATCTGCGAATATGGG...................................................................................GTCCACGTAGCATTTGCAAAAAA-ATCATGAAGTGTGATGATGATACATTTGTTAGAGTGGATGCAGTTATCAAGGAAATAAATAAGATACCCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E428517" ref_strand="+" ref_description="SGN-E428517 [STM-50-B9]">
      <seq>tggacaggtaaagtgtgaggagtggatccgagataatgacaccaaccattcggagcaatcaaagacatcttggtggttaaaccggctagtagggcgaaaaaagaaggtggattttgattggccattcccattttcagaggataggttatttgttctaactctcagtgccggttttgagggttatcacgtgaacgttgatgggaggcatgtgacctcatttccatatcgaattggatttgcgctcgaggattccactggtttgtctttgaatggtgacattgatgtcgattcagtctttgctgcctccttgcccacatcacatcctagttttgctccctcaaggcatcttgatatgtcaaacagatggaaagcaccacccctccttgatcagcctgtgggatctgttcattggcattctgtcggcaggcaatcactttgctgagcgaatggctataaggaggtcttggctgcagcatcagctaatcaaatcttcgaatgttgtggctcgattctttgtcgcattgcacgctaggaaggatataaacgtggagttgaagaaagaagcagaattctttggtgacattgtcattgttcctttcatggacaattatgatcttgttgtcttgaaaacagttgccatctgcgaatatggggtccacgtagcatttgcaaaaatatcatgaagtgtgatgatgatacatttgttagagtggatgcagtta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="7903" stop="6308"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7603" g_stop="7372" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="232" r_length="232" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7371" i_stop="7290" i_length="82">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7289" g_stop="6999" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="524" r_length="292" r_score="0.948"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6998" i_stop="6890" i_length="109">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6889" g_stop="6761" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="653" r_length="129" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6760" i_stop="6678" i_length="83">
            <donor d_prob="0.139" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="6677" g_stop="6608" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="654" r_stop="722" r_length="69" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E428517" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>722</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E428517" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7603" e_stop="7372"/>
          <exon e_start="7289" e_stop="6999"/>
          <exon e_start="6889" e_stop="6761"/>
          <exon e_start="6677" e_stop="6608"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCCAGGTAAAGTGTGAGAAGTGGATCCGAGATAATGACACCAACCATTCGGAGCAATCAAAGGCATCTTGGTGGTTAAACCGGCTTGTAGGGCGAAAAAAGAAGGTCGATTTTGATTGGCCATTCCCATTTTCAGAGGATAGGTTATTTGTTCTAACTCTCAGTGCCGGTTTTGAGGGTTATCACGTGAACGTTGATGGGAGGCATGTGACCTCATTTCCATATCGAATTGTGAGTAATATACTACCACCTCTCCAGTTTCATGCTGAATTATTGAATTGAACTATAGAAGTTTACCAGTGATGCTTTTTAGGGATTTGCGCTCGAGGATGCCACTGGTTTGTCTTTGAATGGTGATATTGATGTCGATTCAGTCTTTGCTGCCTCCTTGCCCACATCACATCCTAGTTTTGCTCCTCAAAGGCATCTTGATATGTCAAATAGATGGAAGACACCACCCCTTCTTGATCAGCCTGT-GGATCTGTTCATTGGCATTCTGTCGGCAGGCAATCACTTTGCTGAGCGAATGGCTATAAGGAGGTCTTGGCTGCAGCACCAGCTCATCAAATCTTCGAATGTTGTGGCTCGATTTTTTGTCGCGTTGGTAGGTTGATAGATGGTAGCATATGCATCATTTTTGCGAATATAGTTTACTATTAACATTGGTGTTGCAGCTTGATAATTTGAGTTTAACTGGATTGGTTTTTTAATAGCACGCTAGGAAGGATATAAACGTGGAGTTGAAGAAAGAAGCACAATTCTTTGGTGACATTGTCATTGTTCCTTTCATGGACAATTATGATCTTGTTGTCTTGAAAACAGTTGCCATCTGCGAATATGGGGTGCGTTGTGGATTACCTATAAACATTGTTGTTGGTTGTCCCCAGCTTAACGTCATCCCAATATTGATATTTTCTTGTTGCAGGTCCATGTAGCATTTGCAAAAAATATCATGAAGTGTGATGATGATACATTTGTTAGAGTGGATGCGGTTA</genome_strand>
        <mrna_strand>TGGACAGGTAAAGTGTGAGGAGTGGATCCGAGATAATGACACCAACCATTCGGAGCAATCAAAGACATCTTGGTGGTTAAACCGGCTAGTAGGGCGAAAAAAGAAGGTGGATTTTGATTGGCCATTCCCATTTTCAGAGGATAGGTTATTTGTTCTAACTCTCAGTGCCGGTTTTGAGGGTTATCACGTGAACGTTGATGGGAGGCATGTGACCTCATTTCCATATCGAATT..................................................................................GGATTTGCGCTCGAGGATTCCACTGGTTTGTCTTTGAATGGTGACATTGATGTCGATTCAGTCTTTGCTGCCTCCTTGCCCACATCACATCCTAGTTTTGCTCCCTCAAGGCATCTTGATATGTCAAACAGATGGAAAGCACCACCCCTCCTTGATCAGCCTGTGGGATCTGTTCATTGGCATTCTGTCGGCAGGCAATCACTTTGCTGAGCGAATGGCTATAAGGAGGTCTTGGCTGCAGCATCAGCTAATCAAATCTTCGAATGTTGTGGCTCGATTCTTTGTCGCATTG.............................................................................................................CACGCTAGGAAGGATATAAACGTGGAGTTGAAGAAAGAAGCAGAATTCTTTGGTGACATTGTCATTGTTCCTTTCATGGACAATTATGATCTTGTTGTCTTGAAAACAGTTGCCATCTGCGAATATGGG...................................................................................GTCCACGTAGCATTTGC-AAAAATATCATGAAGTGTGATGATGATACATTTGTTAGAGTGGATGCAGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E571879" ref_strand="+" ref_description="SGN-E571879 [30945]">
      <seq>ctgagtttttgggaaaagggagaatgatggtgttgccatgtgggcttactcttggttcacatataactgttgtggggaggccgaaaagggctcatcaggagcatgatccaaagatatcattgctgagggaaggtcaattcttgatggtttcacagtttatgatggagttacaaggtctgaagactgttgatggagaggacccacctaggattcttcacttcaatccacggttgagtggtgattggagcgggaagccgatgattgagcagaacacttgttataggatgcagtgggggacggctcaaaggtgtgatgggtggaggtccagggatgatgaggagactgttgatggacaggtaaagtgtgaggagtggatccgagataatgacaccaaccattcggagcaatcaaagacatcttggtggttaaaccggctagtagggcgaaaaaagaaggtggattttgattggccattcccattttcagaggataggttatttgttctaactctcagtgccggttttgagggttatcacgtgaacgttgatgggaggcatgtgacctcatttccatatcgaattggatttgcgctcgaggattccactggtttgtctttgaatggtgacattgatgtcgattcagtctttgctgcctccttgcccacatcacatcctagttttgctcctcaaaggcatcttgatatgtcccacagatggaaggcaccacccctccttgatcaggctgtggatctgttcattggcattctgtcggcaggcaatcactttgctgagcgaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="9155" stop="6774"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8855" g_stop="8511" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="345" r_length="345" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8510" i_stop="7608" i_length="903">
            <donor d_prob="0.953" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7607" g_stop="7372" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="581" r_length="236" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7371" i_stop="7290" i_length="82">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="7289" g_stop="7074" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="582" r_stop="797" r_length="216" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E571879" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>797</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E571879" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8855" e_stop="8511"/>
          <exon e_start="7607" e_stop="7372"/>
          <exon e_start="7289" e_stop="7074"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAGTTTTTGGGGAAAGGGAGAATGATGGTGTTGCCATGTGGGCTTACTCTTGGTTCACATATAACTGTTGTGGGTAAACCGAGAAGGGCTCATCAGGAGCGTGATCCAAAGATATCACTGCTGAGGGAAGGTCAATTCTTGATGGTTTCACAGTTTATGATGGAGTTGCAAGGTCTAAAGACTGTTGATGGGGAGGACCCACCTAGGATTCTTCACTTCAACCCACGGTTGAGTGGTGATTGGAGCGGGAAGCCGATGATTGAGCAGAACACTTGTTATAGGATGCAGTGGGGAACGGCTCAAAGGTGTGATGGGTGGAGGTCCAGGGATGATGAGGAGACTGGTGAGAATATCAATTTTGGTTCTTTTTGTTACTTTATTGGTCGTTAACACATTATTCTGTTTCTAATGAACTAGTTTTATGGGTCAACTATGCTCATTCCCAAACTAGTTGGACTGTCCCTTTATGATCCTTAATATTTTAGTGCTTAGAAGATTCATGTACCTGTTAACTTACTGCAATCCTCCTCCTTTATCTGTACTTGTGACCGGTAATGTGAAACTTACATAGGCAGAGTTGCTAAGAAAAGTCAAATGTTTAATATTAGTTGAACTTAAAAAGATTTGTTAGCTGGAGAAACCGTTTGATTTACTAGTTGAGGTTAAAAGGTGGTTCCTTTTTACTTCATCCGTTTTTGATTTGTTCGTCTTACTTTCCTTTTTAGTTTGTTTAAAAAAGGATGTCTCTTTCCTTTTTTTGGCAACTTCTTAATTCTAACTTTCCACGTGAACATGTTTAAGATCACAAGATCAAAGCATATTTTTGGTACATTACATATTTTTAGTTTAAGACCACGACATTGAAAAGTCTTCGTAAAGTCAAACCGGACAAACAAATTGAAATATAGGTAGTACTTTTTTTGTTGGGAGGTTGGTAGTGGGTGGGGATGCTGCAGAAGTTTTTATAGTGCATAACCAAGCAGCTGAATAAGTTTGAGTATAGAGCTTATTGCTTGAGAAAGTTCTATTTCGTGATGGGTACATTCCTAGGATTTTCATGAGTTGGGGATTATAATTATTTTATATACCTTTTCTACATGGGATTCTTGGCAATTGGATGGAATAAAAAATAAGCAAATTGCCCCATCAGTTACATTTGCATCTGCATCTCTTGTTGTCTGTGGCACAGTAATCTATCATTTGTATGTGGTACGGCATTTTTGGTAACTTCTGGACTCTTTTGCAGTTGATGGCCAGGTAAAGTGTGAGAAGTGGATCCGAGATAATGACACCAACCATTCGGAGCAATCAAAGGCATCTTGGTGGTTAAACCGGCTTGTAGGGCGAAAAAAGAAGGTCGATTTTGATTGGCCATTCCCATTTTCAGAGGATAGGTTATTTGTTCTAACTCTCAGTGCCGGTTTTGAGGGTTATCACGTGAACGTTGATGGGAGGCATGTGACCTCATTTCCATATCGAATTGTGAGTAATATACTACCACCTCTCCAGTTTCATGCTGAATTATTGAATTGAACTATAGAAGTTTACCAGTGATGCTTTTTAGGGATTTGCGCTCGAGGATGCCACTGGTTTGTCTTTGAATGGTGATATTGATGTCGATTCAGTCTTTGCTGCCTCCTTGCCCACATCACATCCTAGTTTTGCTCCTCAAAGGCATCTTGATATGTCAAATAGATGGAAGACACCACCCCTTCTTGATCAGCCTGTGGATCTGTTCATTGGCATTCTGTCGGCAGGCAATCACTTTGCTGAGCGAATG</genome_strand>
        <mrna_strand>CTGAGTTTTTGGGAAAAGGGAGAATGATGGTGTTGCCATGTGGGCTTACTCTTGGTTCACATATAACTGTTGTGGGGAGGCCGAAAAGGGCTCATCAGGAGCATGATCCAAAGATATCATTGCTGAGGGAAGGTCAATTCTTGATGGTTTCACAGTTTATGATGGAGTTACAAGGTCTGAAGACTGTTGATGGAGAGGACCCACCTAGGATTCTTCACTTCAATCCACGGTTGAGTGGTGATTGGAGCGGGAAGCCGATGATTGAGCAGAACACTTGTTATAGGATGCAGTGGGGGACGGCTCAAAGGTGTGATGGGTGGAGGTCCAGGGATGATGAGGAGACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGGACAGGTAAAGTGTGAGGAGTGGATCCGAGATAATGACACCAACCATTCGGAGCAATCAAAGACATCTTGGTGGTTAAACCGGCTAGTAGGGCGAAAAAAGAAGGTGGATTTTGATTGGCCATTCCCATTTTCAGAGGATAGGTTATTTGTTCTAACTCTCAGTGCCGGTTTTGAGGGTTATCACGTGAACGTTGATGGGAGGCATGTGACCTCATTTCCATATCGAATT..................................................................................GGATTTGCGCTCGAGGATTCCACTGGTTTGTCTTTGAATGGTGACATTGATGTCGATTCAGTCTTTGCTGCCTCCTTGCCCACATCACATCCTAGTTTTGCTCCTCAAAGGCATCTTGATATGTCCCACAGATGGAAGGCACCACCCCTCCTTGATCAGGCTGTGGATCTGTTCATTGGCATTCTGTCGGCAGGCAATCACTTTGCTGAGCGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E487250" ref_strand="+" ref_description="SGN-E487250 [cSTE-24-P14]">
      <seq>gtgaagagccagtaatgtttagtcacctgggtccccctcgaaggcgtacggctgcagaagaggaagaaaggatcaaagaccctaaacctgaagactccgtttattatcaccctacactgaatcctactggagctcctcctcctggaaaacctcccatgtttaaatcatcaataggacctagaataccatcatcagctgcatcatcgtcaatgtcagatgcagaagatggcactttatcagctcttccaccaccgccacctccacctccattgcccccaactggtgatgtagattctgtagatgggtctgcgattcctgcatctttacctttacctcctccaccgcctatgcccccaaagcctgcaatgacagacatgggtgcttcattgccattacctcctttgcccccaccgcctcctggccccccaccaaaggaactgatctctggccatcttccacttcctccacctcctccccgacctcttcatcaatctgctcaacttcctcattctggcataggtggaaatgaaagggataaaaatctttctgaattggatgagaggtccgcaacagagcaaaatcaggcctcatccatgtttcccccaccacctcctccaccagggttgcctttgaagtcagatggcatgcctgctgactctgatgctnaagttttggaaaacaaagatcatcttaagttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="12329" stop="14143"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12629" g_stop="12650" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="22" r_length="22" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12651" i_stop="12743" i_length="93">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12744" g_stop="12813" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="92" r_length="70" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12814" i_stop="13027" i_length="214">
            <donor d_prob="0.988" d_score="0.98"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13028" g_stop="13109" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="174" r_length="82" r_score="0.988"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13110" i_stop="13214" i_length="105">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.661" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13215" g_stop="13624" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="584" r_length="410" r_score="0.954"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13625" i_stop="13728" i_length="104">
            <donor d_prob="0.996" d_score="0.90"/>
            <acceptor a_prob="0.996" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="13729" g_stop="13843" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="585" r_stop="699" r_length="115" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E487250" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>699</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E487250" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12629" e_stop="12650"/>
          <exon e_start="12744" e_stop="12813"/>
          <exon e_start="13028" e_stop="13109"/>
          <exon e_start="13215" e_stop="13624"/>
          <exon e_start="13729" e_stop="13843"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAGAGCCAGTAATGTTTAGGTAACAGACAGCCTCTTGTTTGTCATTAATGCTGTGAGAAATGGCCCTTTCTCCTTGATTCTTTTACATGCCTTTTTCTTGCTTTCTCTGCAGTCACCTGGGCCCCCCTCGAAGGCGGACGGCTGCAGAAGAGGAAGAAAGGATCAAAGACCCTAAACCTGAAGTAAGATCTTACTTCACTCTTCTTTTTTAACCCCCTTCCCCCTGGAGCTCCCACCTTTTTGCTTTCTAGGTGACTCGAACTCACAACCTTAAAGTTGGAAGCGAGGGGTGCTTACCATCTGAGTAACTCTCTTTTGTCTATCTTACTTCACTCTTAATTGTTTATGGAAGTTGCTTTTGCTGATCTATGAACAACATGGCCTATGTTGATGCAGGACTCCGTTTATTATCACCCTACACTGAATCCTACTGGAGCTCCTCCTCCTGGAAAACCTCCCATGTTTAAATCATTAATAGGTATCTATAGTTCTTTTTGTCATCTCAATGTCATATTGTTCTCTCTCTCTCTCTCTCTCTCAACTCCCTCTCCCCAGCTCTGATAGTTCCTGCTTCAAACTACAGGACCTAGAATACCATCATCAGCTGCATCATCGTCAAAGTCAGATGCAGAAGATGACACTTTATCAGCTCTTCCGCCACCGCCACCACCACCTCCATTGCCCCCAACTGGTGATGCAGATTCTGTAGATGGGTCTGTGATTCCTGCATCTTTACCTTTACCTCCTCCACCACCTATGCCCCCAAAGCCTGCAATGACAGACATGGGTGCTTCATTGCCATTACCTCCTTTGCCCCCACCACCCCCTGGCCCCCCACCAAAGGAACATATCTCTGGCCATCTTCCACTTCCTCCACCTCCTCCCCGACCTCTTCATCAATCTGCTCAACCTCCTCATTCTGGCATTGTTGGAAATGAAAGGGATAAAAATCTTTCTGAACTGGATGAAATGTCTTCAACAGAGCAAAATCAGGTATACTTCTTATTAATAAGATATTTTGGTCATTTTGGATAAATGATTTATTTACTGTTTCTAGTCCTTTGCCCTAAAGTTATTCAGTCTTCTTAACTTTTCAGGCCTCGTCCATGCTTCCCCCACCACCTCCTCCACCAGGGTTGCCATTAAAGTCAGATGGCATGCCTGCTGACTCTGATGCTAAAGTTTTGGAAACAAAAGATCATCTTAAATTAC</genome_strand>
        <mrna_strand>GTGAAGAGCCAGTAATGTTTAG.............................................................................................TCACCTGGGTCCCCCTCGAAGGCGTACGGCTGCAGAAGAGGAAGAAAGGATCAAAGACCCTAAACCTGAA......................................................................................................................................................................................................................GACTCCGTTTATTATCACCCTACACTGAATCCTACTGGAGCTCCTCCTCCTGGAAAACCTCCCATGTTTAAATCATCAATAG.........................................................................................................GACCTAGAATACCATCATCAGCTGCATCATCGTCAATGTCAGATGCAGAAGATGGCACTTTATCAGCTCTTCCACCACCGCCACCTCCACCTCCATTGCCCCCAACTGGTGATGTAGATTCTGTAGATGGGTCTGCGATTCCTGCATCTTTACCTTTACCTCCTCCACCGCCTATGCCCCCAAAGCCTGCAATGACAGACATGGGTGCTTCATTGCCATTACCTCCTTTGCCCCCACCGCCTCCTGGCCCCCCACCAAAGGAACTGATCTCTGGCCATCTTCCACTTCCTCCACCTCCTCCCCGACCTCTTCATCAATCTGCTCAACTTCCTCATTCTGGCATAGGTGGAAATGAAAGGGATAAAAATCTTTCTGAATTGGATGAGAGGTCCGCAACAGAGCAAAATCAG........................................................................................................GCCTCATCCATGTTTCCCCCACCACCTCCTCCACCAGGGTTGCCTTTGAAGTCAGATGGCATGCCTGCTGACTCTGATGCTNAAGTTTTGGAAAACAAAGATCATCTTAAGTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E427514" ref_strand="+" ref_description="SGN-E427514 [STM-48-J13]">
      <seq>gtgaagagccagtaatgtttagtcacctgggtccccctcgaaggcgtacggctgcagaagaggaagaaaggatcaaagaccctaaacctgaagactccgtttattatcaccctacactgaatcctactggagctcctcctcctggaaaacctcccatgtttaaatcatcaataggacctagaataccatcatcagctgcatcatcgtcaatgtcagatgcagaagatggcactttatcagctcttccaccaccgccacctccacctccattgcccccaactggtgatgtagattctgtagatgggtctgcgattcctgcatctttacctttacctcctccaccgcctatgcccccaaagcctgcaatgacagacatgggtgcttcattgccattacctcctttgcccccaccgcctcctggccccccaccaaaggaactgatctctggccatcttccacttcctccacctcctccccgacctcttcatcaatctgctcaacttcctcattctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="12329" stop="13853"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12629" g_stop="12650" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="22" r_length="22" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12651" i_stop="12743" i_length="93">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12744" g_stop="12813" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="92" r_length="70" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12814" i_stop="13027" i_length="214">
            <donor d_prob="0.988" d_score="0.98"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13028" g_stop="13109" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="174" r_length="82" r_score="0.988"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13110" i_stop="13214" i_length="105">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.661" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13215" g_stop="13553" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="513" r_length="339" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E427514" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E427514" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12629" e_stop="12650"/>
          <exon e_start="12744" e_stop="12813"/>
          <exon e_start="13028" e_stop="13109"/>
          <exon e_start="13215" e_stop="13553"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAGAGCCAGTAATGTTTAGGTAACAGACAGCCTCTTGTTTGTCATTAATGCTGTGAGAAATGGCCCTTTCTCCTTGATTCTTTTACATGCCTTTTTCTTGCTTTCTCTGCAGTCACCTGGGCCCCCCTCGAAGGCGGACGGCTGCAGAAGAGGAAGAAAGGATCAAAGACCCTAAACCTGAAGTAAGATCTTACTTCACTCTTCTTTTTTAACCCCCTTCCCCCTGGAGCTCCCACCTTTTTGCTTTCTAGGTGACTCGAACTCACAACCTTAAAGTTGGAAGCGAGGGGTGCTTACCATCTGAGTAACTCTCTTTTGTCTATCTTACTTCACTCTTAATTGTTTATGGAAGTTGCTTTTGCTGATCTATGAACAACATGGCCTATGTTGATGCAGGACTCCGTTTATTATCACCCTACACTGAATCCTACTGGAGCTCCTCCTCCTGGAAAACCTCCCATGTTTAAATCATTAATAGGTATCTATAGTTCTTTTTGTCATCTCAATGTCATATTGTTCTCTCTCTCTCTCTCTCTCTCAACTCCCTCTCCCCAGCTCTGATAGTTCCTGCTTCAAACTACAGGACCTAGAATACCATCATCAGCTGCATCATCGTCAAAGTCAGATGCAGAAGATGACACTTTATCAGCTCTTCCGCCACCGCCACCACCACCTCCATTGCCCCCAACTGGTGATGCAGATTCTGTAGATGGGTCTGTGATTCCTGCATCTTTACCTTTACCTCCTCCACCACCTATGCCCCCAAAGCCTGCAATGACAGACATGGGTGCTTCATTGCCATTACCTCCTTTGCCCCCACCACCCCCTGGCCCCCCACCAAAGGAACATATCTCTGGCCATCTTCCACTTCCTCCACCTCCTCCCCGACCTCTTCATCAATCTGCTCAACCTCCTCATTCTG</genome_strand>
        <mrna_strand>GTGAAGAGCCAGTAATGTTTAG.............................................................................................TCACCTGGGTCCCCCTCGAAGGCGTACGGCTGCAGAAGAGGAAGAAAGGATCAAAGACCCTAAACCTGAA......................................................................................................................................................................................................................GACTCCGTTTATTATCACCCTACACTGAATCCTACTGGAGCTCCTCCTCCTGGAAAACCTCCCATGTTTAAATCATCAATAG.........................................................................................................GACCTAGAATACCATCATCAGCTGCATCATCGTCAATGTCAGATGCAGAAGATGGCACTTTATCAGCTCTTCCACCACCGCCACCTCCACCTCCATTGCCCCCAACTGGTGATGTAGATTCTGTAGATGGGTCTGCGATTCCTGCATCTTTACCTTTACCTCCTCCACCGCCTATGCCCCCAAAGCCTGCAATGACAGACATGGGTGCTTCATTGCCATTACCTCCTTTGCCCCCACCGCCTCCTGGCCCCCCACCAAAGGAACTGATCTCTGGCCATCTTCCACTTCCTCCACCTCCTCCCCGACCTCTTCATCAATCTGCTCAACTTCCTCATTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E338765" ref_strand="+" ref_description="SGN-E338765 [cTOE-21-O4]">
      <seq>attctggcattgttggaaatgaaagggataaaaatctttctgaactggatgaaatgtcttcaacagagcaaaatcaggcctcgtccatgcttnccccaccacctcctccaccagggttgccattaaagtcagatggcatgcctgctgactctgatgctaaagttttggaaacaaaagatcatcttaaattacctccaccacctccacggcacccttcaggtcttggacctgccatggtcccaacttatcagcctgatgtattacctcctggaatatctcggttccctccaccccctcctccaattgatatgcggccaccacctggaattgccatccagcctgctcctcctggaatgatggtccctctcttgccaagaccaccttttggacctcctccactaatgatgagaccaccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="13248" stop="14368"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13548" g_stop="13624" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13625" i_stop="13728" i_length="104">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13729" g_stop="14068" g_length="340"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="417" r_length="340" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E338765" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E338765" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13548" e_stop="13624"/>
          <exon e_start="13729" e_stop="14068"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCTGGCATTGTTGGAAATGAAAGGGATAAAAATCTTTCTGAACTGGATGAAATGTCTTCAACAGAGCAAAATCAGGTATACTTCTTATTAATAAGATATTTTGGTCATTTTGGATAAATGATTTATTTACTGTTTCTAGTCCTTTGCCCTAAAGTTATTCAGTCTTCTTAACTTTTCAGGCCTCGTCCATGCTTCCCCCACCACCTCCTCCACCAGGGTTGCCATTAAAGTCAGATGGCATGCCTGCTGACTCTGATGCTAAAGTTTTGGAAACAAAAGATCATCTTAAATTACCTCCACCACCTCCACGGCACCCTTCAGGTCTTGGACCTGCCATGGTCCCAACTTATCAGCCTGATGTATTACCTCCTGGAATATCTCGGTTCCCTCCACCCCCTCCTCCAATTGATATGCGGCCACCACCTGGAATTGCCATCCAGCCTGCTCCTCCTGGAATGATGGTCCCTCTCTTGCCAAGACCACCTTTTGGACCTCCTCCACTAATGATGAGACCACCAC</genome_strand>
        <mrna_strand>ATTCTGGCATTGTTGGAAATGAAAGGGATAAAAATCTTTCTGAACTGGATGAAATGTCTTCAACAGAGCAAAATCAG........................................................................................................GCCTCGTCCATGCTTNCCCCACCACCTCCTCCACCAGGGTTGCCATTAAAGTCAGATGGCATGCCTGCTGACTCTGATGCTAAAGTTTTGGAAACAAAAGATCATCTTAAATTACCTCCACCACCTCCACGGCACCCTTCAGGTCTTGGACCTGCCATGGTCCCAACTTATCAGCCTGATGTATTACCTCCTGGAATATCTCGGTTCCCTCCACCCCCTCCTCCAATTGATATGCGGCCACCACCTGGAATTGCCATCCAGCCTGCTCCTCCTGGAATGATGGTCCCTCTCTTGCCAAGACCACCTTTTGGACCTCCTCCACTAATGATGAGACCACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E486633" ref_strand="+" ref_description="SGN-E486633 [cSTE-22-D12]">
      <seq>agagagcaaaatcaggcctcatccatgtttcccccaccacctcctccaccagggttgcctttgaagtcagatggcatgcctgctgactctgatgctaaagttttggaaacaaaagatcatcttaagttacctccaccacctccacggcacccttcaggtcttggacctgccatggtcccaacttttcagcctgatgtattacctcctggaatatctcggttccctccacccccgcctccaactgatatgcggccaccacctggaattgctatccagcctgctcctcctggaatgatggtccctctcttgccaagaccaccttttggacctccactaatgatgagaccaccgcttccacctggtccacctccttttcaacaggatggtgctagactgcttgctcctcaaaagccatcatatgtcaaatcagctgcttcaacagttgttaagaggcctctagctcagcatacaccagaacttacatcaatggttcctgcatctgtgcgtgtgaagagagaatctgcgctcccaaaacccaagccgaagtcatctact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="13425" stop="15637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13610" g_stop="13624" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="15" r_length="15" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13625" i_stop="13728" i_length="104">
            <donor d_prob="0.996" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13729" g_stop="14205" g_length="477"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="489" r_length="474" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14206" i_stop="15271" i_length="1066">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15272" g_stop="15337" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="555" r_length="66" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E486633" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E486633" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13610" e_stop="13624"/>
          <exon e_start="13729" e_stop="14205"/>
          <exon e_start="15272" e_stop="15337"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGAGCAAAATCAGGTATACTTCTTATTAATAAGATATTTTGGTCATTTTGGATAAATGATTTATTTACTGTTTCTAGTCCTTTGCCCTAAAGTTATTCAGTCTTCTTAACTTTTCAGGCCTCGTCCATGCTTCCCCCACCACCTCCTCCACCAGGGTTGCCATTAAAGTCAGATGGCATGCCTGCTGACTCTGATGCTAAAGTTTTGGAAACAAAAGATCATCTTAAATTACCTCCACCACCTCCACGGCACCCTTCAGGTCTTGGACCTGCCATGGTCCCAACTTATCAGCCTGATGTATTACCTCCTGGAATATCTCGGTTCCCTCCACCCCCTCCTCCAATTGATATGCGGCCACCACCTGGAATTGCCATCCAGCCTGCTCCTCCTGGAATGATGGTCCCTCTCTTGCCAAGACCACCTTTTGGACCTCCTCCACTAATGATGAGACCACCACTTCCACCTGGTCCCCCTCCTTTTCAACAGGATGGTGCTAGACTGCTTGCTCCTCAAAAGCCATCATATGTCAAATCAGCTGCTTCAACAGTTATTAAGAGGCCTCTAGCTCAGCATACACCAGAACTTACATCTATGGTGAGTGATCTTTAATTTTACTACCTAATTGTTGTCCTCCTGCACTTATTTACATCAACTGTTACGTATTTTGTAGCATCATTTCAACGCAAACCTAATATATTAGATTGGAGTGTTATCCCCATCCAAATTGTGGATGAAATCAAGGGGATTATGGGCAAGTTCAAATCCTTGTCCAATGTTTGCTAGGAGGGTTAAGCACTGTATAGCATGCTAGTTATATACTTTAATTGTTTGGCCTAATATTTTTTAGAAGTTCGCGCCGAAATATCCTTGGTCAAGTTCAAATTTCGCAGGTGCAAATTTCTGTAACACTAGGCTCTTATTAATTTTGTCACCCTACAACGCCTTGAAGTTTTTTTTTTAAACCATCAAAAGTCAAAACAAAAACATCAGAAAATAGAAAACGATAAATCAAAAGATGGAACTATGAAGTAGAAAATAATACAATTTAAAAAAAAAGAATCATACAACCACAGTACAGAAAGTGACAAAAGCGGAAAAGGAAAAGAAAGCAGCCAAAAAATGAAAATAAAGAACTCAAGAAAGAAAAAGATGTGAAGATTGGATGGAGGTTGTGTGTTGTCATCAGGAGGCTAAAGAGGACATATCAGGGTTCGGGGTAAGGATGTATCCACTTAATTCATTTAAATTAAAAAATTTGTTGAAGAAACTACAGATGCTTTGAGGAAAGGCTAAGAGTCTGAAACTGTATTTAAGCCAGAGTAGTGGTGTTTGCATCAATTAGCTATGTGGTATAACCTCGTGAATGCATGCAAAGTAAATGATATTTTGCTAGACCTCTTAGTTGCAACTCTTCAGTAACAGACATGGAGAGATCTCTATACACTTCTTTTACCTTCCTAGCGTTATCTTAGTGCTGTTGTTGGTTGATGAATAAAACTTTTTGAGGGATATGCACCTTAATAATCTACTGTGTACCTAAAAGATCATTGTCTTGTTGAACTTATTTTTCTATCCAAAACAATAAGTAAAGATGAGAATTTATACTGGGATCTGGACTTGTTCACGTTTGATTCAACACATCACTTATGCTTTCCTATAGGTCCCTGCATCTGTGCGTGTGAGGAGAGAATCTGCGCTCCCAAAACCCAAGCCAAAGTCATCTACT</genome_strand>
        <mrna_strand>AGAGAGCAAAATCAG........................................................................................................GCCTCATCCATGTTTCCCCCACCACCTCCTCCACCAGGGTTGCCTTTGAAGTCAGATGGCATGCCTGCTGACTCTGATGCTAAAGTTTTGGAAACAAAAGATCATCTTAAGTTACCTCCACCACCTCCACGGCACCCTTCAGGTCTTGGACCTGCCATGGTCCCAACTTTTCAGCCTGATGTATTACCTCCTGGAATATCTCGGTTCCCTCCACCCCCGCCTCCAACTGATATGCGGCCACCACCTGGAATTGCTATCCAGCCTGCTCCTCCTGGAATGATGGTCCCTCTCTTGCCAAGACCACCTTTTGGA---CCTCCACTAATGATGAGACCACCGCTTCCACCTGGTCCACCTCCTTTTCAACAGGATGGTGCTAGACTGCTTGCTCCTCAAAAGCCATCATATGTCAAATCAGCTGCTTCAACAGTTGTTAAGAGGCCTCTAGCTCAGCATACACCAGAACTTACATCAATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTGCATCTGTGCGTGTGAAGAGAGAATCTGCGCTCCCAAAACCCAAGCCGAAGTCATCTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E454091" ref_strand="+" ref_description="SGN-E454091 [cSTS-22-I17]">
      <seq>accgcttccacctggtccacctccttttaacaggatggtgctagactgcttgctcctcaaaagccatcatatgtcaaatcagctgcttcaacagttgttaagaggcctctagctcagcatacaccagaacttacatcaatggttcctgcatctgtgcgtgtgaggagagaatctgcactcccaaaacccaagccaaagtcatctactgcggttacaatcaaccagcctgcagtaactccgcctgttgtcaagcatgaatctacaagcgcgcctgcaccaaaacctcaaagcattgatgactcatatacagcattcttggaggacatgaaagctcttggtgctctcgaaggatgaagtaacatcaaataggagaaaggaagaggatggcatgcagaggaaacaagtggccattgacaatctgatgagtctgatatctctgtgaccatgtcttgtgctacttgagtgtccacaactttatggtgctttgatgtatcgaccatctcattctttcttcgtgtgtatgatctatgattcgtctgtattctgattttatcttcctcaacattttgtcgcctctaatgagcagttgatatgcgttagtccagaggatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="13764" stop="16028"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14064" g_stop="14205" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="141" r_length="141" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14206" i_stop="15271" i_length="1066">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15272" g_stop="15728" g_length="457"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="612" r_length="471" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E454091" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>599</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E454091" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14064" e_stop="14205"/>
          <exon e_start="15272" e_stop="15728"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCACTTCCACCTGGTCCCCCTCCTTTTCAACAGGATGGTGCTAGACTGCTTGCTCCTCAAAAGCCATCATATGTCAAATCAGCTGCTTCAACAGTTATTAAGAGGCCTCTAGCTCAGCATACACCAGAACTTACATCTATGGTGAGTGATCTTTAATTTTACTACCTAATTGTTGTCCTCCTGCACTTATTTACATCAACTGTTACGTATTTTGTAGCATCATTTCAACGCAAACCTAATATATTAGATTGGAGTGTTATCCCCATCCAAATTGTGGATGAAATCAAGGGGATTATGGGCAAGTTCAAATCCTTGTCCAATGTTTGCTAGGAGGGTTAAGCACTGTATAGCATGCTAGTTATATACTTTAATTGTTTGGCCTAATATTTTTTAGAAGTTCGCGCCGAAATATCCTTGGTCAAGTTCAAATTTCGCAGGTGCAAATTTCTGTAACACTAGGCTCTTATTAATTTTGTCACCCTACAACGCCTTGAAGTTTTTTTTTTAAACCATCAAAAGTCAAAACAAAAACATCAGAAAATAGAAAACGATAAATCAAAAGATGGAACTATGAAGTAGAAAATAATACAATTTAAAAAAAAAGAATCATACAACCACAGTACAGAAAGTGACAAAAGCGGAAAAGGAAAAGAAAGCAGCCAAAAAATGAAAATAAAGAACTCAAGAAAGAAAAAGATGTGAAGATTGGATGGAGGTTGTGTGTTGTCATCAGGAGGCTAAAGAGGACATATCAGGGTTCGGGGTAAGGATGTATCCACTTAATTCATTTAAATTAAAAAATTTGTTGAAGAAACTACAGATGCTTTGAGGAAAGGCTAAGAGTCTGAAACTGTATTTAAGCCAGAGTAGTGGTGTTTGCATCAATTAGCTATGTGGTATAACCTCGTGAATGCATGCAAAGTAAATGATATTTTGCTAGACCTCTTAGTTGCAACTCTTCAGTAACAGACATGGAGAGATCTCTATACACTTCTTTTACCTTCCTAGCGTTATCTTAGTGCTGTTGTTGGTTGATGAATAAAACTTTTTGAGGGATATGCACCTTAATAATCTACTGTGTACCTAAAAGATCATTGTCTTGTTGAACTTATTTTTCTATCCAAAACAATAAGTAAAGATGAGAATTTATACTGGGATCTGGACTTGTTCACGTTTGATTCAACACATCACTTATGCTTTCCTATAGGTCCCTGCATCTGTGCGTGTGAGGAGAGAATCTGCGCTCCCAAAACCCAAGCCAAAGTCATCTACTGCGGTTACAATCAACCAGCCTGCAGTAACTCCGCCTGTTGTCAAGCATGAATCTACAAGCACACCTGCACCAAAACCTCAAAGCATTGATGACTCGTATACAGCATTCTTGGAGGACATGAAAGCTCTTGGTGCTCTCGAAGGATGAAGTGACATCAAATA-G-G--A-G-AGAGGA----A-G-A--GGAAACAAGTGGCTGTTGACAATCTGATGAGTTTGATATCTCTGTGACCATGTCTTGTGCTACTCGAGTGTCCACAACTTTATGGTGCTTTGATGTATCGACCATCTCATTCTTTCTTCGTGTGTATGATCTATGATTCATCTGTGTTCTGATTTTATCTTCCTCAGCATTTTGTCGCCTCTAATGAGCAGTTGATATGCGTTAGTCCAGAGGAAGT</genome_strand>
        <mrna_strand>ACCGCTTCCACCTGGTCCACCTCCTTTT-AACAGGATGGTGCTAGACTGCTTGCTCCTCAAAAGCCATCATATGTCAAATCAGCTGCTTCAACAGTTGTTAAGAGGCCTCTAGCTCAGCATACACCAGAACTTACATCAATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTGCATCTGTGCGTGTGAGGAGAGAATCTGCACTCCCAAAACCCAAGCCAAAGTCATCTACTGCGGTTACAATCAACCAGCCTGCAGTAACTCCGCCTGTTGTCAAGCATGAATCTACAAGCGCGCCTGCACCAAAACCTCAAAGCATTGATGACTCATATACAGCATTCTTGGAGGACATGAAAGCTCTTGGTGCTCTCGAAGGATGAAGTAACATCAAATAGGAGAAAGGAAGAGGATGGCATGCAGAGGAAACAAGTGGCCATTGACAATCTGATGAGTCTGATATCTCTGTGACCATGTCTTGTGCTACTTGAGTGTCCACAACTTTATGGTGCTTTGATGTATCGACCATCTCATTCTTTCTTCGTGTGTATGATCTATGATTCGTCTGTATTCTGATTTTATCTTCCTCAACATTTTGTCGCCTCTAATGAGCAGTTGATATGCGTTAGTCCAGAGGATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E712878" ref_strand="+" ref_description="SGN-E712878 [FB06AC10]">
      <seq>ggatggtgctagactgcttgctcctcaaaagccatcatatgtcaaatcagctgcttcaacagttattaagaggcctctagctcagcatacaccagaacttacatctatggtccctgcatctgtgcgtgtgaggagagaatctgcgctcccaaaacccaagccaaagtcatctactgcggttacaatcaaccagcctgcagtaactccgcctgttgtcaagcatgaatctacaagcacacctgcaccaaaacctcaaagcattgatgactcgtatacagcattcttggaggacatgaaagctcttggtgctctcgaaggatgaagtgacatcaaataggagagaggaagaggaaacaagtggctgttgacaatctgatgagtttgatatctctgtgaccatgtcttgtgctactcgagtgtccacaactttatggtgctttgatgtatcgaccatctcattctttcttcgtgtgtatgatctatgattcatctgtgttctgattttatcttcctcagcattttgtcgcctctaatgagcagttgatatgcgttagtccagaggaagttggaaaacatattgtaagatggattatttcaaggatctttcttttggctctgaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="13797" stop="16080"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14097" g_stop="14205" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="109" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14206" i_stop="15271" i_length="1066">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15272" g_stop="15779" g_length="508"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="617" r_length="508" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="619" polyA_stop="636"/>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E712878" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>617</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E712878" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14097" e_stop="14205"/>
          <exon e_start="15272" e_stop="15779"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATGGTGCTAGACTGCTTGCTCCTCAAAAGCCATCATATGTCAAATCAGCTGCTTCAACAGTTATTAAGAGGCCTCTAGCTCAGCATACACCAGAACTTACATCTATGGTGAGTGATCTTTAATTTTACTACCTAATTGTTGTCCTCCTGCACTTATTTACATCAACTGTTACGTATTTTGTAGCATCATTTCAACGCAAACCTAATATATTAGATTGGAGTGTTATCCCCATCCAAATTGTGGATGAAATCAAGGGGATTATGGGCAAGTTCAAATCCTTGTCCAATGTTTGCTAGGAGGGTTAAGCACTGTATAGCATGCTAGTTATATACTTTAATTGTTTGGCCTAATATTTTTTAGAAGTTCGCGCCGAAATATCCTTGGTCAAGTTCAAATTTCGCAGGTGCAAATTTCTGTAACACTAGGCTCTTATTAATTTTGTCACCCTACAACGCCTTGAAGTTTTTTTTTTAAACCATCAAAAGTCAAAACAAAAACATCAGAAAATAGAAAACGATAAATCAAAAGATGGAACTATGAAGTAGAAAATAATACAATTTAAAAAAAAAGAATCATACAACCACAGTACAGAAAGTGACAAAAGCGGAAAAGGAAAAGAAAGCAGCCAAAAAATGAAAATAAAGAACTCAAGAAAGAAAAAGATGTGAAGATTGGATGGAGGTTGTGTGTTGTCATCAGGAGGCTAAAGAGGACATATCAGGGTTCGGGGTAAGGATGTATCCACTTAATTCATTTAAATTAAAAAATTTGTTGAAGAAACTACAGATGCTTTGAGGAAAGGCTAAGAGTCTGAAACTGTATTTAAGCCAGAGTAGTGGTGTTTGCATCAATTAGCTATGTGGTATAACCTCGTGAATGCATGCAAAGTAAATGATATTTTGCTAGACCTCTTAGTTGCAACTCTTCAGTAACAGACATGGAGAGATCTCTATACACTTCTTTTACCTTCCTAGCGTTATCTTAGTGCTGTTGTTGGTTGATGAATAAAACTTTTTGAGGGATATGCACCTTAATAATCTACTGTGTACCTAAAAGATCATTGTCTTGTTGAACTTATTTTTCTATCCAAAACAATAAGTAAAGATGAGAATTTATACTGGGATCTGGACTTGTTCACGTTTGATTCAACACATCACTTATGCTTTCCTATAGGTCCCTGCATCTGTGCGTGTGAGGAGAGAATCTGCGCTCCCAAAACCCAAGCCAAAGTCATCTACTGCGGTTACAATCAACCAGCCTGCAGTAACTCCGCCTGTTGTCAAGCATGAATCTACAAGCACACCTGCACCAAAACCTCAAAGCATTGATGACTCGTATACAGCATTCTTGGAGGACATGAAAGCTCTTGGTGCTCTCGAAGGATGAAGTGACATCAAATAGGAGAGAGGAAGAGGAAACAAGTGGCTGTTGACAATCTGATGAGTTTGATATCTCTGTGACCATGTCTTGTGCTACTCGAGTGTCCACAACTTTATGGTGCTTTGATGTATCGACCATCTCATTCTTTCTTCGTGTGTATGATCTATGATTCATCTGTGTTCTGATTTTATCTTCCTCAGCATTTTGTCGCCTCTAATGAGCAGTTGATATGCGTTAGTCCAGAGGAAGTTGGAAAACATATTGTAAGATGGATTATTTCAAGGATCTTTCTTTTGGCTCT</genome_strand>
        <mrna_strand>GGATGGTGCTAGACTGCTTGCTCCTCAAAAGCCATCATATGTCAAATCAGCTGCTTCAACAGTTATTAAGAGGCCTCTAGCTCAGCATACACCAGAACTTACATCTATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCTGCATCTGTGCGTGTGAGGAGAGAATCTGCGCTCCCAAAACCCAAGCCAAAGTCATCTACTGCGGTTACAATCAACCAGCCTGCAGTAACTCCGCCTGTTGTCAAGCATGAATCTACAAGCACACCTGCACCAAAACCTCAAAGCATTGATGACTCGTATACAGCATTCTTGGAGGACATGAAAGCTCTTGGTGCTCTCGAAGGATGAAGTGACATCAAATAGGAGAGAGGAAGAGGAAACAAGTGGCTGTTGACAATCTGATGAGTTTGATATCTCTGTGACCATGTCTTGTGCTACTCGAGTGTCCACAACTTTATGGTGCTTTGATGTATCGACCATCTCATTCTTTCTTCGTGTGTATGATCTATGATTCATCTGTGTTCTGATTTTATCTTCCTCAGCATTTTGTCGCCTCTAATGAGCAGTTGATATGCGTTAGTCCAGAGGAAGTTGGAAAACATATTGTAAGATGGATTATTTCAAGGATCTTTCTTTTGGCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E246785" ref_strand="+" ref_description="SGN-E246785 [cLEF-45-P16]">
      <seq>ttgctcctcaaaagccatcatatgtcaaatcagctgcttcaacagttattaagaggcctctagctcagcatacaccagaacttacatctatggtccctgcatctgtgcgtgtgaggagagaatctgcgctcccaaaacccaagccaaagtcatctactgcggttacaatcaaccagcctgcagtaactccgcctgttgtcaagcatgaatctacaagcacacctgcaccaaaacctcaaagcattgatgactcgtatacagcattcttggaggacatgaaagctcttggtgctctcgaaggatgaagtgacatcaaataggagagaggaagaggaaacaagtggctgttgacaatctgatgagtttgatatctctgtgaccatgtcttgtgctactcgagtgtccacaactttatggtgctttgatgtatcgaccatctcattctttcttcgggtgtatgatctatgattcatctgtgttctgattttatcttcctcagcattttgtcgcctctaatgagcaggtgatatgcgttagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="13814" stop="16017"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14114" g_stop="14205" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14206" i_stop="15271" i_length="1066">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15272" g_stop="15717" g_length="446"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="538" r_length="446" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E246785" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>538</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E246785" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14114" e_stop="14205"/>
          <exon e_start="15272" e_stop="15717"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCTCCTCAAAAGCCATCATATGTCAAATCAGCTGCTTCAACAGTTATTAAGAGGCCTCTAGCTCAGCATACACCAGAACTTACATCTATGGTGAGTGATCTTTAATTTTACTACCTAATTGTTGTCCTCCTGCACTTATTTACATCAACTGTTACGTATTTTGTAGCATCATTTCAACGCAAACCTAATATATTAGATTGGAGTGTTATCCCCATCCAAATTGTGGATGAAATCAAGGGGATTATGGGCAAGTTCAAATCCTTGTCCAATGTTTGCTAGGAGGGTTAAGCACTGTATAGCATGCTAGTTATATACTTTAATTGTTTGGCCTAATATTTTTTAGAAGTTCGCGCCGAAATATCCTTGGTCAAGTTCAAATTTCGCAGGTGCAAATTTCTGTAACACTAGGCTCTTATTAATTTTGTCACCCTACAACGCCTTGAAGTTTTTTTTTTAAACCATCAAAAGTCAAAACAAAAACATCAGAAAATAGAAAACGATAAATCAAAAGATGGAACTATGAAGTAGAAAATAATACAATTTAAAAAAAAAGAATCATACAACCACAGTACAGAAAGTGACAAAAGCGGAAAAGGAAAAGAAAGCAGCCAAAAAATGAAAATAAAGAACTCAAGAAAGAAAAAGATGTGAAGATTGGATGGAGGTTGTGTGTTGTCATCAGGAGGCTAAAGAGGACATATCAGGGTTCGGGGTAAGGATGTATCCACTTAATTCATTTAAATTAAAAAATTTGTTGAAGAAACTACAGATGCTTTGAGGAAAGGCTAAGAGTCTGAAACTGTATTTAAGCCAGAGTAGTGGTGTTTGCATCAATTAGCTATGTGGTATAACCTCGTGAATGCATGCAAAGTAAATGATATTTTGCTAGACCTCTTAGTTGCAACTCTTCAGTAACAGACATGGAGAGATCTCTATACACTTCTTTTACCTTCCTAGCGTTATCTTAGTGCTGTTGTTGGTTGATGAATAAAACTTTTTGAGGGATATGCACCTTAATAATCTACTGTGTACCTAAAAGATCATTGTCTTGTTGAACTTATTTTTCTATCCAAAACAATAAGTAAAGATGAGAATTTATACTGGGATCTGGACTTGTTCACGTTTGATTCAACACATCACTTATGCTTTCCTATAGGTCCCTGCATCTGTGCGTGTGAGGAGAGAATCTGCGCTCCCAAAACCCAAGCCAAAGTCATCTACTGCGGTTACAATCAACCAGCCTGCAGTAACTCCGCCTGTTGTCAAGCATGAATCTACAAGCACACCTGCACCAAAACCTCAAAGCATTGATGACTCGTATACAGCATTCTTGGAGGACATGAAAGCTCTTGGTGCTCTCGAAGGATGAAGTGACATCAAATAGGAGAGAGGAAGAGGAAACAAGTGGCTGTTGACAATCTGATGAGTTTGATATCTCTGTGACCATGTCTTGTGCTACTCGAGTGTCCACAACTTTATGGTGCTTTGATGTATCGACCATCTCATTCTTTCTTCGTGTGTATGATCTATGATTCATCTGTGTTCTGATTTTATCTTCCTCAGCATTTTGTCGCCTCTAATGAGCAGTTGATATGCGTTAGT</genome_strand>
        <mrna_strand>TTGCTCCTCAAAAGCCATCATATGTCAAATCAGCTGCTTCAACAGTTATTAAGAGGCCTCTAGCTCAGCATACACCAGAACTTACATCTATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCTGCATCTGTGCGTGTGAGGAGAGAATCTGCGCTCCCAAAACCCAAGCCAAAGTCATCTACTGCGGTTACAATCAACCAGCCTGCAGTAACTCCGCCTGTTGTCAAGCATGAATCTACAAGCACACCTGCACCAAAACCTCAAAGCATTGATGACTCGTATACAGCATTCTTGGAGGACATGAAAGCTCTTGGTGCTCTCGAAGGATGAAGTGACATCAAATAGGAGAGAGGAAGAGGAAACAAGTGGCTGTTGACAATCTGATGAGTTTGATATCTCTGTGACCATGTCTTGTGCTACTCGAGTGTCCACAACTTTATGGTGCTTTGATGTATCGACCATCTCATTCTTTCTTCGGGTGTATGATCTATGATTCATCTGTGTTCTGATTTTATCTTCCTCAGCATTTTGTCGCCTCTAATGAGCAGGTGATATGCGTTAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E458770" ref_strand="+" ref_description="SGN-E458770 [cPRO-7-G12]">
      <seq>ccagaacttacatcaatggttcctgcatctgtgcgtgtgaggagagaatctgcgctcccaaaacccaagccgaagtcatctactgcggttacaatcaaccagcctgcagtaactccgcctgttgtcaagcatgaatctacaagcgcgcctgcaccaaaacctcaaagcattgatgactcatatacagcattcttggaggacatgaaagctcttggtgctctcgaaggatgaagtaacattaaataggagaaaggaagaggatggcatgcagaggaaacaagtggccattgacaatctgatgagtctgatatctctgtgaccatgtcttgtgctacttgagtgtccacatctttatggtgctttgatgtatcgaccatctcattctttcttcgtgtgtatgatctatgattcatctgtattctgattttatcttcctcaacattttgtcgcctctaatgagcagttgatatgcgttagtccacaggaagtaggacaacatattgtatgatggattatttcaaggaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="14966" stop="16063"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15272" g_stop="15762" g_length="491"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="523" r_length="505" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="524" polyA_stop="534"/>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E458770" ref_strand="+">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="0.919" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E458770" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15272" e_stop="15762"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCCTGCATCTGTGCGTGTGAGGAGAGAATCTGCGCTCCCAAAACCCAAGCCAAAGTCATCTACTGCGGTTACAATCAACCAGCCTGCAGTAACTCCGCCTGTTGTCAAGCATGAATCTACAAGCACACCTGCACCAAAACCTCAAAGCATTGATGACTCGTATACAGCATTCTTGGAGGACATGAAAGCTCTTGGTGCTCTCGAAGGATGAAGTGACATCAAAT-------AGG-AGA-GA-GG-A---AGAGGAAACAAGTGGCTGTTGACAATCTGATGAGTTTGATATCTCTGTGACCATGTCTTGTGCTACTCGAGTGTCCACAACTTTATGGTGCTTTGATGTATCGACCATCTCATTCTTTCTTCGTGTGTATGATCTATGATTCATCTGTGTTCTGATTTTATCTTCCTCAGCATTTTGTCGCCTCTAATGAGCAGTTGATATGCGTTAGTCCAGAGGAAGTTGGAAAACATATTGTAAGATGGATTATTTCAAGG</genome_strand>
        <mrna_strand>GTTCCTGCATCTGTGCGTGTGAGGAGAGAATCTGCGCTCCCAAAACCCAAGCCGAAGTCATCTACTGCGGTTACAATCAACCAGCCTGCAGTAACTCCGCCTGTTGTCAAGCATGAATCTACAAGCGCGCCTGCACCAAAACCTCAAAGCATTGATGACTCATATACAGCATTCTTGGAGGACATGAAAGCTCTTGGTGCTCTCGAAGGATGAAGTAACATTAAATAGGAGAAAGGAAGAGGATGGCATGCAGAGGAAACAAGTGGCCATTGACAATCTGATGAGTCTGATATCTCTGTGACCATGTCTTGTGCTACTTGAGTGTCCACATCTTTATGGTGCTTTGATGTATCGACCATCTCATTCTTTCTTCGTGTGTATGATCTATGATTCATCTGTATTCTGATTTTATCTTCCTCAACATTTTGTCGCCTCTAATGAGCAGTTGATATGCGTTAGTCCACAGGAAGTAGGACAACATATTGTATGATGGATTATTTCAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E426967" ref_strand="+" ref_description="SGN-E426967 [STM-47-D23]">
      <seq>tcagaggaaaaaaaaaacaaataccggtaccctaggaaaacccagaagttacaagtcgaacggcttttctgcttgacgagcaaatatggtgtcttcccttttcattaaatatcgtagacatccgtaatacaaagttcccataacttctgggcactcaaaattcttttccctctaagaggaaacaacaaaatgaatatagtgtatagaagacttactattgaccatcactaagagactacagaccaattgccaatctatacagacttgcttacattggaagtgaaagataatatgattcattacctgtgtacagaagcaatatctcagaaatcaacatctacatgttcctcgtgactacgaaactggtggcaactactactttcttcaaccacaccaccttattgcaaggattccaaaattttcagatgacgcaaatctttgattttgccaatgcttaccaagtatcaacagcaccataacttacatttttcttcccaatcctctgataacttccaccatgatacacatnatttgaagaagtttttctcgctatcaggccaactactcctattttctcttcatcccgtcaacaaatttctgatggtatagtacagtttcttacacaattttgtaactttgcagatcaacagtgcacaatatcgtcattgcctttggcaattgaatggaaaagcacagttgcacatcttcattgcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="25236" stop="26548"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25536" g_stop="26248" g_length="713"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="716" r_length="716" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E426967" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E426967" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25536" e_stop="26248"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGAAGAAGAAAAAAAACAAATACACGTACCCTGGTAAAACCCAGAAGTTAAAAGTCGAACTGGTTTTCTGCTTGACGAGCAAATATGGTGTC-TCCTCTTTCATTAAATATCGTAGACAAGCGTAATACAAAGTTCCCATAACTTCTGGGCACTCAAAATTCTTTTCCCTCAGAGAAGAAACAACAAAATGAATATAGAGTTTAGAAGACTT-TGACTG--CATCACTAAGAGACTACAGACCAATTGCCAATCTATACAGACTTGCTTACATTGGAAGTGAAAGATAATATGATTCATTACCTGTGTACAGAAGCAATATCTCGAAAATCAAACATCTACACATTCCTTGTGACTACGAAACTGGTGGCAACTACTAGTTTCTTTAACCACGCCACCTTATTGTAAGGATTCCAAAATTTTCAGATGACGCAAATCTTTGATTTTACCAATGCTTACCAAGTATCAACAGCACCAGAACTTACATTTTTCTTTCCAATCCTCTGATAACTTCCGCCATGATACACA-AATTTGAAGAAGTTTTTCTCGCTATCAGGCCAACTACTCCTATTTTCTCTTCATCTCGTCAACAAGTTTTCTGATGGTATAGTACAGTTTCTTACACAATTTTGTAACTTTGCAGATCAACAATGCATAATATCGTTGTTCCCCTTAGCGATTGAATGG-AAAGCACAGTAGCATATCTTCGTTGCAGC</genome_strand>
        <mrna_strand>TCAGAGGAA-AAAAAAAACAAATACCGGTACCCTAGGAAAACCCAGAAGTTACAAGTCGAACGGCTTTTCTGCTTGACGAGCAAATATGGTGTCTTCCCTTTTCATTAAATATCGTAGACATCCGTAATACAAAGTTCCCATAACTTCTGGGCACTCAAAATTCTTTTCCCTCTAAGAGGAAACAACAAAATGAATATAGTGTATAGAAGACTTACTATTGACCATCACTAAGAGACTACAGACCAATTGCCAATCTATACAGACTTGCTTACATTGGAAGTGAAAGATAATATGATTCATTACCTGTGTACAGAAGCAATATCTCAGAAATC-AACATCTACATGTTCCTCGTGACTACGAAACTGGTGGCAACTACTACTTTCTTCAACCACACCACCTTATTGCAAGGATTCCAAAATTTTCAGATGACGCAAATCTTTGATTTTGCCAATGCTTACCAAGTATCAACAGCACCATAACTTACATTTTTCTTCCCAATCCTCTGATAACTTCCACCATGATACACATNATTTGAAGAAGTTTTTCTCGCTATCAGGCCAACTACTCCTATTTTCTCTTCATCCCGTCAACAA-ATTTCTGATGGTATAGTACAGTTTCTTACACAATTTTGTAACTTTGCAGATCAACAGTGCACAATATCGTCATTGCCTTTGGCAATTGAATGGAAAAGCACAGTTGCACATCTTCATTGCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E542112" ref_strand="+" ref_description="SGN-E542112 [TUS-63-E2](-)">
      <seq>aagctgtaaactagtccagtcagcaaatggtacctctctaatagtgaaaagatgatctggatcagcgttggtttctttgaagctgtaatctatttcagcttagaaaatatacctccctaagctgcaacgaagatatgctactgtgctttccattcaatcgctaaggggaacaacgatattatgcattgttgatctgcaaagttacaaaattgtgtaagaaactgtactataccatcagaaaacttgttgacgagatgaagagaaaataggagtagttggcctgatagcgagaaaaacttcttcaaatttgtgtatcatggcggaagttatcagaggattggaaagaaaaatgtaagttctggtgctgttgatacttggtaagcattggtaaaatcaaagatttgcgtcatctgaaaattttggaatccttacaataaggtggcgtggttaaagaaactagtagttgccaccagtttcgtagtcacaaggaatgtgtagatgtttgattttcgagatattgcttctgtacacaggtaatgaatcatattatctttcacttccaatgtaagcaagtctgtatagattggcaattggtctgtagtctcttagtgatgcagtcaaagtcttctaaactctatattcattttgttgtttcttctctgagggaaaagaattttgagtgcccagaagttatgggaactttgtattacgcttgtctacgatatttaatgaaagaggagacaccatatttgctcgtcaagcagaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="26668" stop="25301"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26368" g_stop="25598" g_length="771"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="771" r_length="771" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="772" polyA_stop="793"/>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E542112" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>771</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E542112" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26368" e_stop="25598"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTGTAAACTAGTCCAGTCAGCAAATGGTACCTCTCTAATAGTGAAAAGATGATCTGGATCAGCGTTGGTTTCTTTGAAGCTGTAATCTATTTCAGCTTAGAAAATATACCTCCCTAAGCTGCAACGAAGATATGCTACTGTGCTTTCCATTCAATCGCTAAGGGGAACAACGATATTATGCATTGTTGATCTGCAAAGTTACAAAATTGTGTAAGAAACTGTACTATACCATCAGAAAACTTGTTGACGAGATGAAGAGAAAATAGGAGTAGTTGGCCTGATAGCGAGAAAAACTTCTTCAAATTTGTGTATCATGGCGGAAGTTATCAGAGGATTGGAAAGAAAAATGTAAGTTCTGGTGCTGTTGATACTTGGTAAGCATTGGTAAAATCAAAGATTTGCGTCATCTGAAAATTTTGGAATCCTTACAATAAGGTGGCGTGGTTAAAGAAACTAGTAGTTGCCACCAGTTTCGTAGTCACAAGGAATGTGTAGATGTTTGATTTTCGAGATATTGCTTCTGTACACAGGTAATGAATCATATTATCTTTCACTTCCAATGTAAGCAAGTCTGTATAGATTGGCAATTGGTCTGTAGTCTCTTAGTGATGCAGTCAAAGTCTTCTAAACTCTATATTCATTTTGTTGTTTCTTCTCTGAGGGAAAAGAATTTTGAGTGCCCAGAAGTTATGGGAACTTTGTATTACGCTTGTCTACGATATTTAATGAAAGAGGAGACACCATATTTGCTCGTCAAGCAGAAAACCA</genome_strand>
        <mrna_strand>AAGCTGTAAACTAGTCCAGTCAGCAAATGGTACCTCTCTAATAGTGAAAAGATGATCTGGATCAGCGTTGGTTTCTTTGAAGCTGTAATCTATTTCAGCTTAGAAAATATACCTCCCTAAGCTGCAACGAAGATATGCTACTGTGCTTTCCATTCAATCGCTAAGGGGAACAACGATATTATGCATTGTTGATCTGCAAAGTTACAAAATTGTGTAAGAAACTGTACTATACCATCAGAAAACTTGTTGACGAGATGAAGAGAAAATAGGAGTAGTTGGCCTGATAGCGAGAAAAACTTCTTCAAATTTGTGTATCATGGCGGAAGTTATCAGAGGATTGGAAAGAAAAATGTAAGTTCTGGTGCTGTTGATACTTGGTAAGCATTGGTAAAATCAAAGATTTGCGTCATCTGAAAATTTTGGAATCCTTACAATAAGGTGGCGTGGTTAAAGAAACTAGTAGTTGCCACCAGTTTCGTAGTCACAAGGAATGTGTAGATGTTTGATTTTCGAGATATTGCTTCTGTACACAGGTAATGAATCATATTATCTTTCACTTCCAATGTAAGCAAGTCTGTATAGATTGGCAATTGGTCTGTAGTCTCTTAGTGATGCAGTCAAAGTCTTCTAAACTCTATATTCATTTTGTTGTTTCTTCTCTGAGGGAAAAGAATTTTGAGTGCCCAGAAGTTATGGGAACTTTGTATTACGCTTGTCTACGATATTTAATGAAAGAGGAGACACCATATTTGCTCGTCAAGCAGAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E217908" ref_strand="+" ref_description="SGN-E217908 [cLEL-23-C11](-)">
      <seq>aaaatcaaagatttgcgtcatctgaaaattttggaatccttacaataaggtggcgtggttaaagaaactagtagttgccaccagtttggtagtcacaaggaatgtgtagatgtttgattttcgagatattgcttctgtacacaggtaatgaatcatattatctttcacttccaatgtaagcaagtctgtatagattggcaattggtctgtagtctcttagtgatgcagtcaaagtcttctaaactctatattcattttgttgtttcttctctgagggaaaagaattttgagtgcccagaagttatgggaactttgtattacgcttgtctacgatatttaatgaaagaggagacaccatatttgctcgtcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="26279" stop="25301"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25979" g_stop="25598" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="382" r_length="382" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E217908" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>382</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E217908" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25979" e_stop="25598"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCAAAGATTTGCGTCATCTGAAAATTTTGGAATCCTTACAATAAGGTGGCGTGGTTAAAGAAACTAGTAGTTGCCACCAGTTTCGTAGTCACAAGGAATGTGTAGATGTTTGATTTTCGAGATATTGCTTCTGTACACAGGTAATGAATCATATTATCTTTCACTTCCAATGTAAGCAAGTCTGTATAGATTGGCAATTGGTCTGTAGTCTCTTAGTGATGCAGTCAAAGTCTTCTAAACTCTATATTCATTTTGTTGTTTCTTCTCTGAGGGAAAAGAATTTTGAGTGCCCAGAAGTTATGGGAACTTTGTATTACGCTTGTCTACGATATTTAATGAAAGAGGAGACACCATATTTGCTCGTCAAGCAGAAAACCA</genome_strand>
        <mrna_strand>AAAATCAAAGATTTGCGTCATCTGAAAATTTTGGAATCCTTACAATAAGGTGGCGTGGTTAAAGAAACTAGTAGTTGCCACCAGTTTGGTAGTCACAAGGAATGTGTAGATGTTTGATTTTCGAGATATTGCTTCTGTACACAGGTAATGAATCATATTATCTTTCACTTCCAATGTAAGCAAGTCTGTATAGATTGGCAATTGGTCTGTAGTCTCTTAGTGATGCAGTCAAAGTCTTCTAAACTCTATATTCATTTTGTTGTTTCTTCTCTGAGGGAAAAGAATTTTGAGTGCCCAGAAGTTATGGGAACTTTGTATTACGCTTGTCTACGATATTTAATGAAAGAGGAGACACCATATTTGCTCGTCAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E218128" ref_strand="+" ref_description="SGN-E218128 [cLEL-23-C11](-)">
      <seq>tcatctgaaaattttggaatccttccaataaggtggcgtggttaaagaaactagtagttgccaccagtttcgtagtcacaaggaatgtgtagatgtttgattttcgagatattgcttctgtacacaggtaatgaatcatattatctttcacttccaatgtaagcaagtctgtatagattggcaattggtctgtagtctcttagtgatgcagtcaaagtcttctaaactctatattcattttgttgtttcttctctgagggaaaagaattttgagtgcccagaagttatgggaactttgtattacgcttgtctacgatatttaatgaaagaggagacaccatatttgctcgtcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="26262" stop="25301"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25962" g_stop="25598" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="365" r_length="365" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E218128" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>365</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E218128" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25962" e_stop="25598"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATCTGAAAATTTTGGAATCCTTACAATAAGGTGGCGTGGTTAAAGAAACTAGTAGTTGCCACCAGTTTCGTAGTCACAAGGAATGTGTAGATGTTTGATTTTCGAGATATTGCTTCTGTACACAGGTAATGAATCATATTATCTTTCACTTCCAATGTAAGCAAGTCTGTATAGATTGGCAATTGGTCTGTAGTCTCTTAGTGATGCAGTCAAAGTCTTCTAAACTCTATATTCATTTTGTTGTTTCTTCTCTGAGGGAAAAGAATTTTGAGTGCCCAGAAGTTATGGGAACTTTGTATTACGCTTGTCTACGATATTTAATGAAAGAGGAGACACCATATTTGCTCGTCAAGCAGAAAACCA</genome_strand>
        <mrna_strand>TCATCTGAAAATTTTGGAATCCTTCCAATAAGGTGGCGTGGTTAAAGAAACTAGTAGTTGCCACCAGTTTCGTAGTCACAAGGAATGTGTAGATGTTTGATTTTCGAGATATTGCTTCTGTACACAGGTAATGAATCATATTATCTTTCACTTCCAATGTAAGCAAGTCTGTATAGATTGGCAATTGGTCTGTAGTCTCTTAGTGATGCAGTCAAAGTCTTCTAAACTCTATATTCATTTTGTTGTTTCTTCTCTGAGGGAAAAGAATTTTGAGTGCCCAGAAGTTATGGGAACTTTGTATTACGCTTGTCTACGATATTTAATGAAAGAGGAGACACCATATTTGCTCGTCAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E544198" ref_strand="+" ref_description="SGN-E544198 [TUS-66-G13](-)">
      <seq>cgaagctgtaanctagtccagtcagcaaatggtacctctctaatagtgaaaagatgatctggatcagcgttggtttctttgaagctgtaatctatttcagcttagaaaatatacctccctaagctgcaacgaagatatgctactgtgctttccattcaatcgctaaggggaacaacgatattatgcattgttgatctgcaaagttacaaaattgtgtaagaaactgtactataccatcagaaaacttgttgacgagatgaagagaaaataggagtagttggcctgatagcgagaaaaacttcttcaaatttgtgtatcatggcggaagttatcagaggattggaaagaaaaatgtaagttctggtgctgttgatacttggtaagcattggtaaaatcaaagatttgcgtcatctgaaaattttggaatccttacaataaggtggcgtggttaaagaaactagtagttgccaccagtttcgtagtcacaaggaatgtgtagatgtttgattttcgagatattgcttctgtacacaggtaatgaatcatattatctttcacttccaatgtaagcaagtctgtatagattggcaattggtctgtagtctcttagtgatgcagtcaaagtcttctaaactctatattcattttgttgtttcttctctgagggaaaagaattttgagtgcccagaagttatgggaactttgtattacgcttgtctacgatatttaatgaaagaggagacaccatatttgctcgtcaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="26670" stop="25301"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26370" g_stop="25599" g_length="772"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="772" r_length="772" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E544198" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>772</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E544198" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26370" e_stop="25599"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAGCTGTAAACTAGTCCAGTCAGCAAATGGTACCTCTCTAATAGTGAAAAGATGATCTGGATCAGCGTTGGTTTCTTTGAAGCTGTAATCTATTTCAGCTTAGAAAATATACCTCCCTAAGCTGCAACGAAGATATGCTACTGTGCTTTCCATTCAATCGCTAAGGGGAACAACGATATTATGCATTGTTGATCTGCAAAGTTACAAAATTGTGTAAGAAACTGTACTATACCATCAGAAAACTTGTTGACGAGATGAAGAGAAAATAGGAGTAGTTGGCCTGATAGCGAGAAAAACTTCTTCAAATTTGTGTATCATGGCGGAAGTTATCAGAGGATTGGAAAGAAAAATGTAAGTTCTGGTGCTGTTGATACTTGGTAAGCATTGGTAAAATCAAAGATTTGCGTCATCTGAAAATTTTGGAATCCTTACAATAAGGTGGCGTGGTTAAAGAAACTAGTAGTTGCCACCAGTTTCGTAGTCACAAGGAATGTGTAGATGTTTGATTTTCGAGATATTGCTTCTGTACACAGGTAATGAATCATATTATCTTTCACTTCCAATGTAAGCAAGTCTGTATAGATTGGCAATTGGTCTGTAGTCTCTTAGTGATGCAGTCAAAGTCTTCTAAACTCTATATTCATTTTGTTGTTTCTTCTCTGAGGGAAAAGAATTTTGAGTGCCCAGAAGTTATGGGAACTTTGTATTACGCTTGTCTACGATATTTAATGAAAGAGGAGACACCATATTTGCTCGTCAAGCAGAAAACC</genome_strand>
        <mrna_strand>CGAAGCTGTAANCTAGTCCAGTCAGCAAATGGTACCTCTCTAATAGTGAAAAGATGATCTGGATCAGCGTTGGTTTCTTTGAAGCTGTAATCTATTTCAGCTTAGAAAATATACCTCCCTAAGCTGCAACGAAGATATGCTACTGTGCTTTCCATTCAATCGCTAAGGGGAACAACGATATTATGCATTGTTGATCTGCAAAGTTACAAAATTGTGTAAGAAACTGTACTATACCATCAGAAAACTTGTTGACGAGATGAAGAGAAAATAGGAGTAGTTGGCCTGATAGCGAGAAAAACTTCTTCAAATTTGTGTATCATGGCGGAAGTTATCAGAGGATTGGAAAGAAAAATGTAAGTTCTGGTGCTGTTGATACTTGGTAAGCATTGGTAAAATCAAAGATTTGCGTCATCTGAAAATTTTGGAATCCTTACAATAAGGTGGCGTGGTTAAAGAAACTAGTAGTTGCCACCAGTTTCGTAGTCACAAGGAATGTGTAGATGTTTGATTTTCGAGATATTGCTTCTGTACACAGGTAATGAATCATATTATCTTTCACTTCCAATGTAAGCAAGTCTGTATAGATTGGCAATTGGTCTGTAGTCTCTTAGTGATGCAGTCAAAGTCTTCTAAACTCTATATTCATTTTGTTGTTTCTTCTCTGAGGGAAAAGAATTTTGAGTGCCCAGAAGTTATGGGAACTTTGTATTACGCTTGTCTACGATATTTAATGAAAGAGGAGACACCATATTTGCTCGTCAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E553957" ref_strand="+" ref_description="SGN-E553957 [cTSC-2-M13]">
      <seq>gagcaaatatggtgtctcctctttcattaaatatcgtagacaagcgtaatacaaagttcccataacttctgggcactcaaaattcttttccctcagagaagaaacaacaaaatgaatatagagtttagaagactttgactgcatcactaagagactacagaccaattgccaatctatacagacttgcttacattggaagtgaaagataatatgattcattacctgtgtacagaagcaatatctcgaaaatcaaacatctacacattccttgtgactacgaaactggtggcaactactagtttctttaaccacgccaccttattgtaaggattccaaaattttcagatgacgcaaatctttgattttaccaatgcttaccaagtatcaacagcaccagaacttacatttttctttccaatcctctgataacttccgccatgatacacaaatttgaagaagtttttctcgctatcaggccaactactcctattttctcttcatctcgtcaacaagttttctgatggtatagtacagtttcttacacaattttgtaactttgcagatcaacaatgcataatatcgttgttccccttagcgattgaatggaaagcacagtagcatatcttcgttgcagcttagggaggtatattttctaagctgaaatagattacagcttcaaagaaaccaacgctgatccagatcatcttttcactattagagaggtaccatttgctgactggactagtttacagcttcgaagaanaggacctgcggttgcaaatgccctctctcacacatgacgagaacatcatcccagccaccaattacctttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="25314" stop="26743"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25614" g_stop="26447" g_length="834"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="834" r_length="834" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E553957" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>834</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E553957" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25614" e_stop="26447"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCAAATATGGTGTCTCCTCTTTCATTAAATATCGTAGACAAGCGTAATACAAAGTTCCCATAACTTCTGGGCACTCAAAATTCTTTTCCCTCAGAGAAGAAACAACAAAATGAATATAGAGTTTAGAAGACTTTGACTGCATCACTAAGAGACTACAGACCAATTGCCAATCTATACAGACTTGCTTACATTGGAAGTGAAAGATAATATGATTCATTACCTGTGTACAGAAGCAATATCTCGAAAATCAAACATCTACACATTCCTTGTGACTACGAAACTGGTGGCAACTACTAGTTTCTTTAACCACGCCACCTTATTGTAAGGATTCCAAAATTTTCAGATGACGCAAATCTTTGATTTTACCAATGCTTACCAAGTATCAACAGCACCAGAACTTACATTTTTCTTTCCAATCCTCTGATAACTTCCGCCATGATACACAAATTTGAAGAAGTTTTTCTCGCTATCAGGCCAACTACTCCTATTTTCTCTTCATCTCGTCAACAAGTTTTCTGATGGTATAGTACAGTTTCTTACACAATTTTGTAACTTTGCAGATCAACAATGCATAATATCGTTGTTCCCCTTAGCGATTGAATGGAAAGCACAGTAGCATATCTTCGTTGCAGCTTAGGGAGGTATATTTTCTAAGCTGAAATAGATTACAGCTTCAAAGAAACCAACGCTGATCCAGATCATCTTTTCACTATTAGAGAGGTACCATTTGCTGACTGGACTAGTTTACAGCTTCGAAGAAAAGGACCTGCGGTTGCAAATGCCCTCTCTCACACATGACGAGAACATCATCCCAGCCACCAATTACCTGAAT</genome_strand>
        <mrna_strand>GAGCAAATATGGTGTCTCCTCTTTCATTAAATATCGTAGACAAGCGTAATACAAAGTTCCCATAACTTCTGGGCACTCAAAATTCTTTTCCCTCAGAGAAGAAACAACAAAATGAATATAGAGTTTAGAAGACTTTGACTGCATCACTAAGAGACTACAGACCAATTGCCAATCTATACAGACTTGCTTACATTGGAAGTGAAAGATAATATGATTCATTACCTGTGTACAGAAGCAATATCTCGAAAATCAAACATCTACACATTCCTTGTGACTACGAAACTGGTGGCAACTACTAGTTTCTTTAACCACGCCACCTTATTGTAAGGATTCCAAAATTTTCAGATGACGCAAATCTTTGATTTTACCAATGCTTACCAAGTATCAACAGCACCAGAACTTACATTTTTCTTTCCAATCCTCTGATAACTTCCGCCATGATACACAAATTTGAAGAAGTTTTTCTCGCTATCAGGCCAACTACTCCTATTTTCTCTTCATCTCGTCAACAAGTTTTCTGATGGTATAGTACAGTTTCTTACACAATTTTGTAACTTTGCAGATCAACAATGCATAATATCGTTGTTCCCCTTAGCGATTGAATGGAAAGCACAGTAGCATATCTTCGTTGCAGCTTAGGGAGGTATATTTTCTAAGCTGAAATAGATTACAGCTTCAAAGAAACCAACGCTGATCCAGATCATCTTTTCACTATTAGAGAGGTACCATTTGCTGACTGGACTAGTTTACAGCTTCGAAGAANAGGACCTGCGGTTGCAAATGCCCTCTCTCACACATGACGAGAACATCATCCCAGCCACCAATTACCTTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E423019" ref_strand="+" ref_description="SGN-E423019 [STM-41-K8]">
      <seq>tcccttttcattatttatcgtagacatccgtaatacaaagttcccataacttctgggcactcaaaattcttttccctctaagaggaaacaacaaaatgaatatagagtgtatagaagacttactattgaccgcatcactaagagactacagaccaattgccaatctatacagacttgcttacattggaagtgaaagataatatgattcattacctgtgtacagaagcaatatctcagaaatcaaacatctacatgttcctcgtgactacgaaactggtggcaactactactttcttcaaccacgccaccttattgtaaggattccaaaattttcagatgacgcaaatctttgattttgccaatgcttaccaagtatcaacagcaccataacttacatttttcttcccaatcctctgataacttccaccatgataaacatatttgaagaagtttttctagctatcaggccaactactcctattttctcttcatcccgtcaacaaatttctgatggtatagtacagtttcttacacaattttgtaactttgcggatcaacagtatcgtcattgcctttggcaattgaatggaaaaacacagttgcacatcttcattgcagcttagggaggtatttttctaagctgaaatagattacagcttcaaagaaaccaacgctgatccagatcatcttttgactattagagaggtaccatttgctggcgggactagtttacagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="25331" stop="26666"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25630" g_stop="26366" g_length="737"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="736" r_length="736" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E423019" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>737</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E423019" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25630" e_stop="26366"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTCTTTCATTAAATATCGTAGACAAGCGTAATACAAAGTTCCCATAACTTCTGGGCACTCAAAATTCTTTTCCCTCAGAGAAGAAACAACAAAATGAATATAGAGT-T-TAGAAG----ACT-TTGACTGCATCACTAAGAGACTACAGACCAATTGCCAATCTATACAGACTTGCTTACATTGGAAGTGAAAGATAATATGATTCATTACCTGTGTACAGAAGCAATATCTCGAAAATCAAACATCTACACATTCCTTGTGACTACGAAACTGGTGGCAACTACTAGTTTCTTTAACCACGCCACCTTATTGTAAGGATTCCAAAATTTTCAGATGACGCAAATCTTTGATTTTACCAATGCTTACCAAGTATCAACAGCACCAGAACTTACATTTTTCTTTCCAATCCTCTGATAACTTCCGCCATGATACACAAATTTGAAGAAGTTTTTCTCGCTATCAGGCCAACTACTCCTATTTTCTCTTCATCTCGTCAACAAGTTTTCTGATGGTATAGTACAGTTTCTTACACAATTTTGTAACTTTGCAGATCAACAATGCATAATATCGTTGTTCCCCTTAGCGATTGAATGG-AAAGCACAGTAGCATATCTTCGTTGCAGCTTAGGGAGGTATATTTTCTAAGCTGAAATAGATTACAGCTTCAAAGAAACCAACGCTGATCCAGATCATCTTTTCACTATTAGAGAGGTACCATTTGCTGACTGGACTAGTTTACAGC</genome_strand>
        <mrna_strand>TCCCTTTTCATTATTTATCGTAGACATCCGTAATACAAAGTTCCCATAACTTCTGGGCACTCAAAATTCTTTTCCCTCTAAGAGGAAACAACAAAATGAATATAGAGTGTATAGAAGACTTACTATTGACCGCATCACTAAGAGACTACAGACCAATTGCCAATCTATACAGACTTGCTTACATTGGAAGTGAAAGATAATATGATTCATTACCTGTGTACAGAAGCAATATCTCAGAAATCAAACATCTACATGTTCCTCGTGACTACGAAACTGGTGGCAACTACTACTTTCTTCAACCACGCCACCTTATTGTAAGGATTCCAAAATTTTCAGATGACGCAAATCTTTGATTTTGCCAATGCTTACCAAGTATCAACAGCACCATAACTTACATTTTTCTTCCCAATCCTCTGATAACTTCCACCATGATAAACATATTTGAAGAAGTTTTTCTAGCTATCAGGCCAACTACTCCTATTTTCTCTTCATCCCGTCAACAA-ATTTCTGATGGTATAGTACAGTTTCTTACACAATTTTGTAACTTTGCGGATCAAC-A-G-----TATCGTCATTGCCTTTGGCAATTGAATGGAAAAACACAGTTGCACATCTTCATTGCAGCTTAGGGAGGTAT-TTTTCTAAGCTGAAATAGATTACAGCTTCAAAGAAACCAACGCTGATCCAGATCATCTTTTGACTATTAGAGAGGTACCATTTGCTGGCGGGACTAGTTTACAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E306843" ref_strand="+" ref_description="SGN-E306843 [cLEY-11-L13]">
      <seq>gtggctgggatgatgttctcgtcatgtgtgagagagggcatttgcaaccgcaggtccttttcttcgaagctgtaaactagtccagtcagcaaatggtacctctctaatagtgaaaagatgatctggatcagcgttggtttctttgaagctgtaatctatttcagcttagaaaatatacctccctaagctgcaacgaagatatgctactgtgctttccattcaatcgctaaggggaacaacgatattatgcattgttgatctgcaaagttacaaaattgtgtaagaaactgtactataccatcagaaaacttgttgacgagatgaagagaaaataggagtagttggcctgatagcgagaaaaacttcttcaaatttgtgtatcatggcggaagttatcagaggattggaaagaaaaatgtaagttctggtgctgttgatacttggtaagcattggtaaaatcaaagatttgcgtcatctgaaaattttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="26734" stop="25646"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26434" g_stop="25946" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="489" r_length="489" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E306843" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E306843" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26434" e_stop="25946"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGCTGGGATGATGTTCTCGTCATGTGTGAGAGAGGGCATTTGCAACCGCAGGTCCTTTTCTTCGAAGCTGTAAACTAGTCCAGTCAGCAAATGGTACCTCTCTAATAGTGAAAAGATGATCTGGATCAGCGTTGGTTTCTTTGAAGCTGTAATCTATTTCAGCTTAGAAAATATACCTCCCTAAGCTGCAACGAAGATATGCTACTGTGCTTTCCATTCAATCGCTAAGGGGAACAACGATATTATGCATTGTTGATCTGCAAAGTTACAAAATTGTGTAAGAAACTGTACTATACCATCAGAAAACTTGTTGACGAGATGAAGAGAAAATAGGAGTAGTTGGCCTGATAGCGAGAAAAACTTCTTCAAATTTGTGTATCATGGCGGAAGTTATCAGAGGATTGGAAAGAAAAATGTAAGTTCTGGTGCTGTTGATACTTGGTAAGCATTGGTAAAATCAAAGATTTGCGTCATCTGAAAATTTTGG</genome_strand>
        <mrna_strand>GTGGCTGGGATGATGTTCTCGTCATGTGTGAGAGAGGGCATTTGCAACCGCAGGTCCTTTTCTTCGAAGCTGTAAACTAGTCCAGTCAGCAAATGGTACCTCTCTAATAGTGAAAAGATGATCTGGATCAGCGTTGGTTTCTTTGAAGCTGTAATCTATTTCAGCTTAGAAAATATACCTCCCTAAGCTGCAACGAAGATATGCTACTGTGCTTTCCATTCAATCGCTAAGGGGAACAACGATATTATGCATTGTTGATCTGCAAAGTTACAAAATTGTGTAAGAAACTGTACTATACCATCAGAAAACTTGTTGACGAGATGAAGAGAAAATAGGAGTAGTTGGCCTGATAGCGAGAAAAACTTCTTCAAATTTGTGTATCATGGCGGAAGTTATCAGAGGATTGGAAAGAAAAATGTAAGTTCTGGTGCTGTTGATACTTGGTAAGCATTGGTAAAATCAAAGATTTGCGTCATCTGAAAATTTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E549003" ref_strand="+" ref_description="SGN-E549003 [TUS-66-G13]">
      <seq>aaggttatgtgtccagaaagctcatttgacgagcttctgaatcttgttgagatgaaccatcagttggcttgcgatcctgaggttggtggatgtgagaaacttaactatattcatcacattctctctgctccaccacatattttcacaacggttttgggttggcaaaatacttgtgaggatgtagatgacataaaagccacattatcagctttatctactgaagtggacatcggcgtcctttatcggggtcttgatccgaaaaacaaacattgcttaacttctgtggtttgctactatggacagcattatcactgttttgcctacagtcatgatcgtggacagtggatcatgtatgatgacaaaaccgtaaaggtaattggtggctgggatgatgttctcgtcatgtgtgagagagggcatttgcaaccgcaggtccttttcttcgaagctgtaaactagtccagtcagcaaatggtacctctctaatagtgaaaagatgatctggatcagcgttggtttctttgaagctgtaatctatttcagcttagaaaatatacctccctaagctgcaacgaagatatgctactgtgctttccattcaatcgctaaggggaacaacgatattatgcattgttgatctgcaaagttacaaaattgtgtaagaaactgtactataccatcagaaaacttgttgacgagatgaagagaaaataggagtagttggcctgatagcgagaaaacttcttcaaatttgtgtatcatggcgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="28435" stop="25745"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28308" g_stop="28306" g_length="3"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="3" r_length="3" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28305" i_stop="28134" i_length="172">
            <donor d_prob="0.974" d_score="0.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28133" g_stop="27986" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="4" r_stop="151" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27985" i_stop="27859" i_length="127">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27858" g_stop="27725" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="285" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27724" i_stop="26606" i_length="1119">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26605" g_stop="26519" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="372" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26518" i_stop="26442" i_length="77">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26441" g_stop="26045" g_length="397"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="768" r_length="396" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E549003" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>769</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E549003" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28308" e_stop="28306"/>
          <exon e_start="28133" e_stop="27986"/>
          <exon e_start="27858" e_stop="27725"/>
          <exon e_start="26605" e_stop="26519"/>
          <exon e_start="26441" e_stop="26045"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGCATGTTCTGTTGTTTTTTGAGTCAATTTTGAACATAAGTTTCCGTTAGTAAATTTATCTTTTTAAGTTCAATAAGTGACATTGTTTGTACAATGAGCAATTTTCTTTATTGTTATCATGAGGAGTGGGCTAATTTGCACATTTTACAGAGTATTTTGTTTTTTCCTTTCAGGTTATGTGTCCAGAAAGCTCATTTGACGAGCTTCTGAATCTTGTTGAGATGAACCATCAGTTGGCTTGCGATCCTGAGGTTGGTGGATGTGAGAAACTTAACTATATTCATCACATTCTCTCTGCTCCACCACATATTTTCACAACGGGTAACTAGTTTTGATGTTTTCCCCCTTCCCTCCTTTCTCTAATATGTTTTGGTTGCCAAATGGGTAATGTAATTTTATTTAGAGAATCTATTTGTTTCTAATGTGACTTGTTTCTTCCTCCCCACAGTTTTGGGTTGGCAAAATACTTGTGAGGATGTAGATGACATAAAAGCCACATTATCAGCTTTATCTACTGAAGTGGACATCGGCGTCCTTTATCGGGGTCTTGATCCGAAAAACAAACATTGCTTAACTTCTGTGGTAATGTTTCTTTTTCTTTTGTCTGCTGACTTTTTCGTTTATGTATTGTTAGGAAATTAGTATTTGGAATCCCTTAACTAGCTCGAGACAAAATATAATCAAGTCACTGGCACTGAATATACAAATCCATTCATATTTCAGATAGTTCCTGCTGTGGAAAATCTCACACGTTCCTCATCAATGTTATATATTTTCATAAAATCATGCCAATTGGTTTTTGTTCTGCAAATAGTACCTGCCAGCTGGTTAATTTTTATTTTTTTGCGGTTTCAACTAATTGAGGATTACTTTCTGTCATTTCTCATGAAAGAAGTACTCGTGATATTATTGTGCCCTTTTTATTAACTGTATTTTCATGATGTTAAAGAATGACAAAAGTCCCACATCGGTGGTAATGAGATGGGTAGAATCTTTATAAGGCTTAGGTAATTCTCCTTCCTTTGAGCTAGCTTTTGGGTGTGAGTTAGGCCTAAGACCTAATTAACATGGTATCAGAGCAGGGCCCGTCTCACCCGTTGTCGGGGCCCCCAAAATTAAAATTGCCCATGCACCAGATGCTAAAGCATTGGGCGTGAGGTGGGGTGTTAAAGAATGACAAAAGTCCCACATCGGTGGTTAATGAGATGAGTTGACTCCTTATGAGGCTTGGATAATTTTCCTCCCTTTGAGCTAGCTTTTGGGGTTGAGTTATGTCTAAGAACTAATTCAACGCATGATTGATGCATGAATGCGACTATTTGGTCACCACAGGTTTATTTTATTTTTTTGGTATTTCCTTGTTTGTGTCAACAACATATACTGTTTTGCACCCAGAGTTTGGGTCAAAACATATCTGAAATGACATAGCTTTCTTTTTTTGTTCCCATGTGCAGGTTTTTCTCTATTAAGCCTAAATATCTTTGAGATTGTTTTTATTTTTAAAAAAAGAATTTATCTGCATCTGCATTTGCTTAAGCTAAAGGTATCTTTCATGTTGCTAGGTTGAATATAAGAATCACTTTGTAGTACTTTTGGATGTTGAACCATGTTTAGTTTGTAGTTAAACAAGTGTTTATTTAATTCTGATGTTGTTGATACGTCTCTAAAGATGGGATGCTTTTATGACAACATTTGTTTCAGGTTTGCTACTATGGACAGCATTATCACTGTTTTGCCTACAGTCATGATCGTGGACAGTGGATCATGTATGATGACAAAACCGTAAAGGTAATATTCTGTTTCTTCCTATTTTTCTTTGTCATCTTTTACATAAGATTTTTTAATTATGGATATTTTATATTCAGGTAATTGGTGGCTGGGATGATGTTCTCGTCATGTGTGAGAGAGGGCATTTGCAACCGCAGGTCCTTTTCTTCGAAGCTGTAAACTAGTCCAGTCAGCAAATGGTACCTCTCTAATAGTGAAAAGATGATCTGGATCAGCGTTGGTTTCTTTGAAGCTGTAATCTATTTCAGCTTAGAAAATATACCTCCCTAAGCTGCAACGAAGATATGCTACTGTGCTTTCCATTCAATCGCTAAGGGGAACAACGATATTATGCATTGTTGATCTGCAAAGTTACAAAATTGTGTAAGAAACTGTACTATACCATCAGAAAACTTGTTGACGAGATGAAGAGAAAATAGGAGTAGTTGGCCTGATAGCGAGAAAAACTTCTTCAAATTTGTGTATCATGGCGGA</genome_strand>
        <mrna_strand>AAG............................................................................................................................................................................GTTATGTGTCCAGAAAGCTCATTTGACGAGCTTCTGAATCTTGTTGAGATGAACCATCAGTTGGCTTGCGATCCTGAGGTTGGTGGATGTGAGAAACTTAACTATATTCATCACATTCTCTCTGCTCCACCACATATTTTCACAACGG...............................................................................................................................TTTTGGGTTGGCAAAATACTTGTGAGGATGTAGATGACATAAAAGCCACATTATCAGCTTTATCTACTGAAGTGGACATCGGCGTCCTTTATCGGGGTCTTGATCCGAAAAACAAACATTGCTTAACTTCTGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGCTACTATGGACAGCATTATCACTGTTTTGCCTACAGTCATGATCGTGGACAGTGGATCATGTATGATGACAAAACCGTAAAG.............................................................................GTAATTGGTGGCTGGGATGATGTTCTCGTCATGTGTGAGAGAGGGCATTTGCAACCGCAGGTCCTTTTCTTCGAAGCTGTAAACTAGTCCAGTCAGCAAATGGTACCTCTCTAATAGTGAAAAGATGATCTGGATCAGCGTTGGTTTCTTTGAAGCTGTAATCTATTTCAGCTTAGAAAATATACCTCCCTAAGCTGCAACGAAGATATGCTACTGTGCTTTCCATTCAATCGCTAAGGGGAACAACGATATTATGCATTGTTGATCTGCAAAGTTACAAAATTGTGTAAGAAACTGTACTATACCATCAGAAAACTTGTTGACGAGATGAAGAGAAAATAGGAGTAGTTGGCCTGATAGCGAG-AAAACTTCTTCAAATTTGTGTATCATGGCGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E736342" ref_strand="+" ref_description="SGN-E736342 [LC05BF05]">
      <seq>agatagctcatttgacgagcttctgaatcttgttgagatgaaccatcagttggcttgcgatcctgaggttggtggatgtgagaaacttaactatattcatcacattctctctgctccaccacatattttcacaacggttttgggttggcaaaatacttgtgaggatgtagatgacataaaagccacattatcagctttatctactgaagtggacatcggcgtcctttatcggggtcttgatccgaaaaacaaacattgcttaacttctgtggtttgctactatggacagcattatcactgttttgcctacagtcatgatcgtggacagtggatcatgtatgatgacaaaaccgtaaaggtaattggtggctgggatgatgttctcgtcatgtgtgagagagggcatttgcaaccgcaggtccttttcttcgaagctgtaaactagtccagtcagcaaatggtacctctctaatagtgaaaagatgatctggatcagcgttggtttctttgaagctgtaatctatttcagcttagaaaatatacctccctaagctgcaacgaagatatgctactgtgctttccattcaatcgctaaggggaacaacgatattatgcattgttgatctgcaaagttacaaaattgtgtaagaaactgtactataccatcaaaaaacttgttgacgagatgaagagaaaataggagtagttggcctgatagcgagaaaaacttcttcaaatttgtgtatcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="28422" stop="25750"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28122" g_stop="27986" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="137" r_length="137" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27985" i_stop="27859" i_length="127">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27858" g_stop="27725" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="271" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27724" i_stop="26606" i_length="1119">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26605" g_stop="26519" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="358" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26518" i_stop="26442" i_length="77">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26441" g_stop="26050" g_length="392"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="750" r_length="392" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E736342" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>750</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E736342" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28122" e_stop="27986"/>
          <exon e_start="27858" e_stop="27725"/>
          <exon e_start="26605" e_stop="26519"/>
          <exon e_start="26441" e_stop="26050"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAGCTCATTTGACGAGCTTCTGAATCTTGTTGAGATGAACCATCAGTTGGCTTGCGATCCTGAGGTTGGTGGATGTGAGAAACTTAACTATATTCATCACATTCTCTCTGCTCCACCACATATTTTCACAACGGGTAACTAGTTTTGATGTTTTCCCCCTTCCCTCCTTTCTCTAATATGTTTTGGTTGCCAAATGGGTAATGTAATTTTATTTAGAGAATCTATTTGTTTCTAATGTGACTTGTTTCTTCCTCCCCACAGTTTTGGGTTGGCAAAATACTTGTGAGGATGTAGATGACATAAAAGCCACATTATCAGCTTTATCTACTGAAGTGGACATCGGCGTCCTTTATCGGGGTCTTGATCCGAAAAACAAACATTGCTTAACTTCTGTGGTAATGTTTCTTTTTCTTTTGTCTGCTGACTTTTTCGTTTATGTATTGTTAGGAAATTAGTATTTGGAATCCCTTAACTAGCTCGAGACAAAATATAATCAAGTCACTGGCACTGAATATACAAATCCATTCATATTTCAGATAGTTCCTGCTGTGGAAAATCTCACACGTTCCTCATCAATGTTATATATTTTCATAAAATCATGCCAATTGGTTTTTGTTCTGCAAATAGTACCTGCCAGCTGGTTAATTTTTATTTTTTTGCGGTTTCAACTAATTGAGGATTACTTTCTGTCATTTCTCATGAAAGAAGTACTCGTGATATTATTGTGCCCTTTTTATTAACTGTATTTTCATGATGTTAAAGAATGACAAAAGTCCCACATCGGTGGTAATGAGATGGGTAGAATCTTTATAAGGCTTAGGTAATTCTCCTTCCTTTGAGCTAGCTTTTGGGTGTGAGTTAGGCCTAAGACCTAATTAACATGGTATCAGAGCAGGGCCCGTCTCACCCGTTGTCGGGGCCCCCAAAATTAAAATTGCCCATGCACCAGATGCTAAAGCATTGGGCGTGAGGTGGGGTGTTAAAGAATGACAAAAGTCCCACATCGGTGGTTAATGAGATGAGTTGACTCCTTATGAGGCTTGGATAATTTTCCTCCCTTTGAGCTAGCTTTTGGGGTTGAGTTATGTCTAAGAACTAATTCAACGCATGATTGATGCATGAATGCGACTATTTGGTCACCACAGGTTTATTTTATTTTTTTGGTATTTCCTTGTTTGTGTCAACAACATATACTGTTTTGCACCCAGAGTTTGGGTCAAAACATATCTGAAATGACATAGCTTTCTTTTTTTGTTCCCATGTGCAGGTTTTTCTCTATTAAGCCTAAATATCTTTGAGATTGTTTTTATTTTTAAAAAAAGAATTTATCTGCATCTGCATTTGCTTAAGCTAAAGGTATCTTTCATGTTGCTAGGTTGAATATAAGAATCACTTTGTAGTACTTTTGGATGTTGAACCATGTTTAGTTTGTAGTTAAACAAGTGTTTATTTAATTCTGATGTTGTTGATACGTCTCTAAAGATGGGATGCTTTTATGACAACATTTGTTTCAGGTTTGCTACTATGGACAGCATTATCACTGTTTTGCCTACAGTCATGATCGTGGACAGTGGATCATGTATGATGACAAAACCGTAAAGGTAATATTCTGTTTCTTCCTATTTTTCTTTGTCATCTTTTACATAAGATTTTTTAATTATGGATATTTTATATTCAGGTAATTGGTGGCTGGGATGATGTTCTCGTCATGTGTGAGAGAGGGCATTTGCAACCGCAGGTCCTTTTCTTCGAAGCTGTAAACTAGTCCAGTCAGCAAATGGTACCTCTCTAATAGTGAAAAGATGATCTGGATCAGCGTTGGTTTCTTTGAAGCTGTAATCTATTTCAGCTTAGAAAATATACCTCCCTAAGCTGCAACGAAGATATGCTACTGTGCTTTCCATTCAATCGCTAAGGGGAACAACGATATTATGCATTGTTGATCTGCAAAGTTACAAAATTGTGTAAGAAACTGTACTATACCATCAGAAAACTTGTTGACGAGATGAAGAGAAAATAGGAGTAGTTGGCCTGATAGCGAGAAAAACTTCTTCAAATTTGTGTATCATG</genome_strand>
        <mrna_strand>AGATAGCTCATTTGACGAGCTTCTGAATCTTGTTGAGATGAACCATCAGTTGGCTTGCGATCCTGAGGTTGGTGGATGTGAGAAACTTAACTATATTCATCACATTCTCTCTGCTCCACCACATATTTTCACAACGG...............................................................................................................................TTTTGGGTTGGCAAAATACTTGTGAGGATGTAGATGACATAAAAGCCACATTATCAGCTTTATCTACTGAAGTGGACATCGGCGTCCTTTATCGGGGTCTTGATCCGAAAAACAAACATTGCTTAACTTCTGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGCTACTATGGACAGCATTATCACTGTTTTGCCTACAGTCATGATCGTGGACAGTGGATCATGTATGATGACAAAACCGTAAAG.............................................................................GTAATTGGTGGCTGGGATGATGTTCTCGTCATGTGTGAGAGAGGGCATTTGCAACCGCAGGTCCTTTTCTTCGAAGCTGTAAACTAGTCCAGTCAGCAAATGGTACCTCTCTAATAGTGAAAAGATGATCTGGATCAGCGTTGGTTTCTTTGAAGCTGTAATCTATTTCAGCTTAGAAAATATACCTCCCTAAGCTGCAACGAAGATATGCTACTGTGCTTTCCATTCAATCGCTAAGGGGAACAACGATATTATGCATTGTTGATCTGCAAAGTTACAAAATTGTGTAAGAAACTGTACTATACCATCAAAAAACTTGTTGACGAGATGAAGAGAAAATAGGAGTAGTTGGCCTGATAGCGAGAAAAACTTCTTCAAATTTGTGTATCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E426966" ref_strand="+" ref_description="SGN-E426966 [STM-47-D23]">
      <seq>gttggcttgcgatcctgaggttggtggatgtgagaaacttaactatattcatcacattctctctgctccaccacatattttcacaactgttttgggttggcagaatacttgtgaggatgtagatgacataaaagcgacattatcagctttatctactgaagtggacatcggcgtcctttatcgtggtcttgatccgaaaaacaaacatcgcctaatttctgtggtttgctactatggacagcattatcactgttttgcctacagtcatgatcgtggacagtggctcatgtatgatgacaaaaccgtaaaggtaattggtggctgggatgatgttctcgttatgtgtgaaagagggcatttgcaaccgcaggtccttttcttcgaagctgtaaactagtccagccagcaaatggtacctctctaatagtcaaaaagatgatctggaatcagcgttggtttctttgaagctgtaatctatttcagcttagaaaaatacctccctaagctgcaatgaagatgtgcaactgtgcttttccattcaattgccaaaggcaatgacgatattgtgcactgttgatctgcaaagttacaaaattgtgtaagaaactgtactataccatcagaaatttgttgacgggatgaaaagaaatangagtagttggcctgatagcgagaaaacttcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="28374" stop="25766"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28074" g_stop="27986" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27985" i_stop="27859" i_length="127">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27858" g_stop="27725" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="223" r_length="134" r_score="0.955"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27724" i_stop="26606" i_length="1119">
            <donor d_prob="0.966" d_score="0.92"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26605" g_stop="26519" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="310" r_length="87" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26518" i_stop="26442" i_length="77">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26441" g_stop="26066" g_length="376"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="685" r_length="375" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E426966" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>686</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E426966" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28074" e_stop="27986"/>
          <exon e_start="27858" e_stop="27725"/>
          <exon e_start="26605" e_stop="26519"/>
          <exon e_start="26441" e_stop="26066"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGGCTTGCGATCCTGAGGTTGGTGGATGTGAGAAACTTAACTATATTCATCACATTCTCTCTGCTCCACCACATATTTTCACAACGGGTAACTAGTTTTGATGTTTTCCCCCTTCCCTCCTTTCTCTAATATGTTTTGGTTGCCAAATGGGTAATGTAATTTTATTTAGAGAATCTATTTGTTTCTAATGTGACTTGTTTCTTCCTCCCCACAGTTTTGGGTTGGCAAAATACTTGTGAGGATGTAGATGACATAAAAGCCACATTATCAGCTTTATCTACTGAAGTGGACATCGGCGTCCTTTATCGGGGTCTTGATCCGAAAAACAAACATTGCTTAACTTCTGTGGTAATGTTTCTTTTTCTTTTGTCTGCTGACTTTTTCGTTTATGTATTGTTAGGAAATTAGTATTTGGAATCCCTTAACTAGCTCGAGACAAAATATAATCAAGTCACTGGCACTGAATATACAAATCCATTCATATTTCAGATAGTTCCTGCTGTGGAAAATCTCACACGTTCCTCATCAATGTTATATATTTTCATAAAATCATGCCAATTGGTTTTTGTTCTGCAAATAGTACCTGCCAGCTGGTTAATTTTTATTTTTTTGCGGTTTCAACTAATTGAGGATTACTTTCTGTCATTTCTCATGAAAGAAGTACTCGTGATATTATTGTGCCCTTTTTATTAACTGTATTTTCATGATGTTAAAGAATGACAAAAGTCCCACATCGGTGGTAATGAGATGGGTAGAATCTTTATAAGGCTTAGGTAATTCTCCTTCCTTTGAGCTAGCTTTTGGGTGTGAGTTAGGCCTAAGACCTAATTAACATGGTATCAGAGCAGGGCCCGTCTCACCCGTTGTCGGGGCCCCCAAAATTAAAATTGCCCATGCACCAGATGCTAAAGCATTGGGCGTGAGGTGGGGTGTTAAAGAATGACAAAAGTCCCACATCGGTGGTTAATGAGATGAGTTGACTCCTTATGAGGCTTGGATAATTTTCCTCCCTTTGAGCTAGCTTTTGGGGTTGAGTTATGTCTAAGAACTAATTCAACGCATGATTGATGCATGAATGCGACTATTTGGTCACCACAGGTTTATTTTATTTTTTTGGTATTTCCTTGTTTGTGTCAACAACATATACTGTTTTGCACCCAGAGTTTGGGTCAAAACATATCTGAAATGACATAGCTTTCTTTTTTTGTTCCCATGTGCAGGTTTTTCTCTATTAAGCCTAAATATCTTTGAGATTGTTTTTATTTTTAAAAAAAGAATTTATCTGCATCTGCATTTGCTTAAGCTAAAGGTATCTTTCATGTTGCTAGGTTGAATATAAGAATCACTTTGTAGTACTTTTGGATGTTGAACCATGTTTAGTTTGTAGTTAAACAAGTGTTTATTTAATTCTGATGTTGTTGATACGTCTCTAAAGATGGGATGCTTTTATGACAACATTTGTTTCAGGTTTGCTACTATGGACAGCATTATCACTGTTTTGCCTACAGTCATGATCGTGGACAGTGGATCATGTATGATGACAAAACCGTAAAGGTAATATTCTGTTTCTTCCTATTTTTCTTTGTCATCTTTTACATAAGATTTTTTAATTATGGATATTTTATATTCAGGTAATTGGTGGCTGGGATGATGTTCTCGTCATGTGTGAGAGAGGGCATTTGCAACCGCAGGTCCTTTTCTTCGAAGCTGTAAACTAGTCCAGTCAGCAAATGGTACCTCTCTAATAGT-GAAAAGATGATCTGG-ATCAGCGTTGGTTTCTTTGAAGCTGTAATCTATTTCAGCTTAGAAAATATACCTCCCTAAGCTGCAACGAAGATATGCTACTGTGC-TTTCCATTCAATCGCTAAGGGGAACAACGATATTATGCATTGTTGATCTGCAAAGTTACAAAATTGTGTAAGAAACTGTACTATACCATCAGAAAACTTGTTGACGAGATGAAGAGAAAATAGGAGTAGTTGGCCTGATAGCGAGAAAAACTTCTTC</genome_strand>
        <mrna_strand>GTTGGCTTGCGATCCTGAGGTTGGTGGATGTGAGAAACTTAACTATATTCATCACATTCTCTCTGCTCCACCACATATTTTCACAACTG...............................................................................................................................TTTTGGGTTGGCAGAATACTTGTGAGGATGTAGATGACATAAAAGCGACATTATCAGCTTTATCTACTGAAGTGGACATCGGCGTCCTTTATCGTGGTCTTGATCCGAAAAACAAACATCGCCTAATTTCTGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGCTACTATGGACAGCATTATCACTGTTTTGCCTACAGTCATGATCGTGGACAGTGGCTCATGTATGATGACAAAACCGTAAAG.............................................................................GTAATTGGTGGCTGGGATGATGTTCTCGTTATGTGTGAAAGAGGGCATTTGCAACCGCAGGTCCTTTTCTTCGAAGCTGTAAACTAGTCCAGCCAGCAAATGGTACCTCTCTAATAGTCAAAAAGATGATCTGGAATCAGCGTTGGTTTCTTTGAAGCTGTAATCTATTTCAGCTTAGAAAA-ATACCTCCCTAAGCTGCAATGAAGATGTGCAACTGTGCTTTTCCATTCAATTGCCAAAGGCAATGACGATATTGTGCACTGTTGATCTGCAAAGTTACAAAATTGTGTAAGAAACTGTACTATACCATCAG-AAATTTGTTGACGGGATGAAAAG-AAATANGAGTAGTTGGCCTGATAGCGAG-AAAACTTCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E482651" ref_strand="+" ref_description="SGN-E482651 [cSTE-1-K17]">
      <seq>tttcaccaactgttttgggttggcagactacttgtgaggactgtagctgacataaaagcgacattatcagctttctctacctgaagtggacatcggcgtcctttatcgtggtcttgatccgaaaaacaaacatcgcctaatttctgtggtttgctactatggacagcattatcactgttttgcctacagtcatgatcgtggacagtggctcatgtatgatgacaaaaccgtaaaggtaattggtggctgggatgatgttctcgttatgtgtgaaagagggcatttgcaaccgcaggtccttttcttcgaagctgtaaactagtccagccagcaaatggtacctctctaatagtcaaaaagatgatctggatcagcgttggtttctttgaagctgtaatctatttcagcttagaaaaatacctccctaagctgcaatgaagatgtgcaactgtgcttttccattcaattgccaaaggcaatgacgatattgtgcactgtttgatctgcaaagttacaaaaattgtgtaagaaaactgtactataccatcagaaaatttgttgacgggnatgaagagaaaataggaagtagtttggcctgatagcgagaaaaacttctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="28167" stop="25767"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27996" g_stop="27986" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="12" r_length="12" r_score="0.727"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27985" i_stop="27859" i_length="127">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="0.991" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27858" g_stop="27725" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="148" r_length="136" r_score="0.903"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27724" i_stop="26606" i_length="1119">
            <donor d_prob="0.966" d_score="0.92"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26605" g_stop="26519" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="235" r_length="87" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26518" i_stop="26442" i_length="77">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26441" g_stop="26067" g_length="375"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="617" r_length="382" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E482651" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E482651" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27996" e_stop="27986"/>
          <exon e_start="27858" e_stop="27725"/>
          <exon e_start="26605" e_stop="26519"/>
          <exon e_start="26441" e_stop="26067"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCA-CAACGGGTAACTAGTTTTGATGTTTTCCCCCTTCCCTCCTTTCTCTAATATGTTTTGGTTGCCAAATGGGTAATGTAATTTTATTTAGAGAATCTATTTGTTTCTAATGTGACTTGTTTCTTCCTCCCCACAGTTTTGGGTTGGCAAAATACTTGTGAGGA-TGTAGATGACATAAAAGCCACATTATCAGCTTTATCTA-CTGAAGTGGACATCGGCGTCCTTTATCGGGGTCTTGATCCGAAAAACAAACATTGCTTAACTTCTGTGGTAATGTTTCTTTTTCTTTTGTCTGCTGACTTTTTCGTTTATGTATTGTTAGGAAATTAGTATTTGGAATCCCTTAACTAGCTCGAGACAAAATATAATCAAGTCACTGGCACTGAATATACAAATCCATTCATATTTCAGATAGTTCCTGCTGTGGAAAATCTCACACGTTCCTCATCAATGTTATATATTTTCATAAAATCATGCCAATTGGTTTTTGTTCTGCAAATAGTACCTGCCAGCTGGTTAATTTTTATTTTTTTGCGGTTTCAACTAATTGAGGATTACTTTCTGTCATTTCTCATGAAAGAAGTACTCGTGATATTATTGTGCCCTTTTTATTAACTGTATTTTCATGATGTTAAAGAATGACAAAAGTCCCACATCGGTGGTAATGAGATGGGTAGAATCTTTATAAGGCTTAGGTAATTCTCCTTCCTTTGAGCTAGCTTTTGGGTGTGAGTTAGGCCTAAGACCTAATTAACATGGTATCAGAGCAGGGCCCGTCTCACCCGTTGTCGGGGCCCCCAAAATTAAAATTGCCCATGCACCAGATGCTAAAGCATTGGGCGTGAGGTGGGGTGTTAAAGAATGACAAAAGTCCCACATCGGTGGTTAATGAGATGAGTTGACTCCTTATGAGGCTTGGATAATTTTCCTCCCTTTGAGCTAGCTTTTGGGGTTGAGTTATGTCTAAGAACTAATTCAACGCATGATTGATGCATGAATGCGACTATTTGGTCACCACAGGTTTATTTTATTTTTTTGGTATTTCCTTGTTTGTGTCAACAACATATACTGTTTTGCACCCAGAGTTTGGGTCAAAACATATCTGAAATGACATAGCTTTCTTTTTTTGTTCCCATGTGCAGGTTTTTCTCTATTAAGCCTAAATATCTTTGAGATTGTTTTTATTTTTAAAAAAAGAATTTATCTGCATCTGCATTTGCTTAAGCTAAAGGTATCTTTCATGTTGCTAGGTTGAATATAAGAATCACTTTGTAGTACTTTTGGATGTTGAACCATGTTTAGTTTGTAGTTAAACAAGTGTTTATTTAATTCTGATGTTGTTGATACGTCTCTAAAGATGGGATGCTTTTATGACAACATTTGTTTCAGGTTTGCTACTATGGACAGCATTATCACTGTTTTGCCTACAGTCATGATCGTGGACAGTGGATCATGTATGATGACAAAACCGTAAAGGTAATATTCTGTTTCTTCCTATTTTTCTTTGTCATCTTTTACATAAGATTTTTTAATTATGGATATTTTATATTCAGGTAATTGGTGGCTGGGATGATGTTCTCGTCATGTGTGAGAGAGGGCATTTGCAACCGCAGGTCCTTTTCTTCGAAGCTGTAAACTAGTCCAGTCAGCAAATGGTACCTCTCTAATAGT-GAAAAGATGATCTGGATCAGCGTTGGTTTCTTTGAAGCTGTAATCTATTTCAGCTTAGAAAATATACCTCCCTAAGCTGCAACGAAGATATGCTACTGTGC-TTTCCATTCAATCGCTAAGGGGAACAACGATATTATGCATTG-TTGATCTGCAAAGTTAC-AAAATTGTGTAAG-AAACTGTACTATACCATCAGAAAACTTGTTGACGAG-ATGAAGAGAAAATAGG-AGTAG-TTGGCCTGATAGCGAGAAAAACTTCTT</genome_strand>
        <mrna_strand>TTTCACCAACTG...............................................................................................................................TTTTGGGTTGGCAGACTACTTGTGAGGACTGTAGCTGACATAAAAGCGACATTATCAGCTTTCTCTACCTGAAGTGGACATCGGCGTCCTTTATCGTGGTCTTGATCCGAAAAACAAACATCGCCTAATTTCTGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGCTACTATGGACAGCATTATCACTGTTTTGCCTACAGTCATGATCGTGGACAGTGGCTCATGTATGATGACAAAACCGTAAAG.............................................................................GTAATTGGTGGCTGGGATGATGTTCTCGTTATGTGTGAAAGAGGGCATTTGCAACCGCAGGTCCTTTTCTTCGAAGCTGTAAACTAGTCCAGCCAGCAAATGGTACCTCTCTAATAGTCAAAAAGATGATCTGGATCAGCGTTGGTTTCTTTGAAGCTGTAATCTATTTCAGCTTAGAAAA-ATACCTCCCTAAGCTGCAATGAAGATGTGCAACTGTGCTTTTCCATTCAATTGCCAAAGGCAATGACGATATTGTGCACTGTTTGATCTGCAAAGTTACAAAAATTGTGTAAGAAAACTGTACTATACCATCAGAAAATTTGTTGACGGGNATGAAGAGAAAATAGGAAGTAGTTTGGCCTGATAGCGAGAAAAACTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E239504" ref_strand="+" ref_description="SGN-E239504 [cLED-23-H8]">
      <seq>tactatggacagcattatcactgttttgcctacagtcatgatcgtggacagtggatcatgtatgatgacaaaaccgtaaaggtaattggtggctgggatgatgttctcgtcatgtgtgagagagggcatttgcaaccgcaggtccttttcttcgaagctgtaaactagtccagtcagcaaatggtacctctctaatagtgaaaagatgatctggatcagcgttggtttctttgaagctgtaatctatttcagcttagaaaatatacctccctaagctgcaacgaagatatgctactgtgctttccattcaatcgctaaggggaacaacgatattatgcattgttgatctgcaaagttacaaaattgtgtaagaaactgtactataccatcagaaaacttgttgacgagatgaagagaaaataggagtag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="26899" stop="25794"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26599" g_stop="26519" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26518" i_stop="26442" i_length="77">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26441" g_stop="26094" g_length="348"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="429" r_length="348" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E239504" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E239504" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26599" e_stop="26519"/>
          <exon e_start="26441" e_stop="26094"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACTATGGACAGCATTATCACTGTTTTGCCTACAGTCATGATCGTGGACAGTGGATCATGTATGATGACAAAACCGTAAAGGTAATATTCTGTTTCTTCCTATTTTTCTTTGTCATCTTTTACATAAGATTTTTTAATTATGGATATTTTATATTCAGGTAATTGGTGGCTGGGATGATGTTCTCGTCATGTGTGAGAGAGGGCATTTGCAACCGCAGGTCCTTTTCTTCGAAGCTGTAAACTAGTCCAGTCAGCAAATGGTACCTCTCTAATAGTGAAAAGATGATCTGGATCAGCGTTGGTTTCTTTGAAGCTGTAATCTATTTCAGCTTAGAAAATATACCTCCCTAAGCTGCAACGAAGATATGCTACTGTGCTTTCCATTCAATCGCTAAGGGGAACAACGATATTATGCATTGTTGATCTGCAAAGTTACAAAATTGTGTAAGAAACTGTACTATACCATCAGAAAACTTGTTGACGAGATGAAGAGAAAATAGGAGTAG</genome_strand>
        <mrna_strand>TACTATGGACAGCATTATCACTGTTTTGCCTACAGTCATGATCGTGGACAGTGGATCATGTATGATGACAAAACCGTAAAG.............................................................................GTAATTGGTGGCTGGGATGATGTTCTCGTCATGTGTGAGAGAGGGCATTTGCAACCGCAGGTCCTTTTCTTCGAAGCTGTAAACTAGTCCAGTCAGCAAATGGTACCTCTCTAATAGTGAAAAGATGATCTGGATCAGCGTTGGTTTCTTTGAAGCTGTAATCTATTTCAGCTTAGAAAATATACCTCCCTAAGCTGCAACGAAGATATGCTACTGTGCTTTCCATTCAATCGCTAAGGGGAACAACGATATTATGCATTGTTGATCTGCAAAGTTACAAAATTGTGTAAGAAACTGTACTATACCATCAGAAAACTTGTTGACGAGATGAAGAGAAAATAGGAGTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E484610" ref_strand="+" ref_description="SGN-E484610 [cSTE-14-C19]">
      <seq>gttggcttgcgcgcctgaggttggtggacgtgagaaacttaactctattcatcacattctctctgctccaccacatattttcacaactgttttgggttggcagaatacttgtgaggatgtagatgacataaaagcgacattatcagctttatctactgaagtggacatcggcgtcctttatcgtggtcttgatccgaaaaacaaacatcgcctaatttctgtggtttgctactatggacagcattatcactgttttgcctacagtcatgatcgtggacagtggctcatgtatgatgacaaaaccgtaaaggtaattggtggctgggatgatgttctcgttatgtgtgaaagagggcatttgcaaccgcaggtccttttcttcgaagctgtaaactagtccagccagcaaatggtacctctctaatagtcaaaaagatgatctggatcagcgttggtttctttgaagctgtaatctatttcagcttagaaaaatacctccctaagctgcaatgaagatgtgcaactgtgcttttccattcaattgccaaaggcaatgacgatattgtgcactgtttgatctgcaaagtta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="28374" stop="25865"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28074" g_stop="27986" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27985" i_stop="27859" i_length="127">
            <donor d_prob="0.989" d_score="0.96"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27858" g_stop="27725" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="223" r_length="134" r_score="0.955"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27724" i_stop="26606" i_length="1119">
            <donor d_prob="0.966" d_score="0.92"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26605" g_stop="26519" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="310" r_length="87" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26518" i_stop="26442" i_length="77">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26441" g_stop="26165" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="589" r_length="279" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E484610" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E484610" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28074" e_stop="27986"/>
          <exon e_start="27858" e_stop="27725"/>
          <exon e_start="26605" e_stop="26519"/>
          <exon e_start="26441" e_stop="26165"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGGCTTGCGATCCTGAGGTTGGTGGATGTGAGAAACTTAACTATATTCATCACATTCTCTCTGCTCCACCACATATTTTCACAACGGGTAACTAGTTTTGATGTTTTCCCCCTTCCCTCCTTTCTCTAATATGTTTTGGTTGCCAAATGGGTAATGTAATTTTATTTAGAGAATCTATTTGTTTCTAATGTGACTTGTTTCTTCCTCCCCACAGTTTTGGGTTGGCAAAATACTTGTGAGGATGTAGATGACATAAAAGCCACATTATCAGCTTTATCTACTGAAGTGGACATCGGCGTCCTTTATCGGGGTCTTGATCCGAAAAACAAACATTGCTTAACTTCTGTGGTAATGTTTCTTTTTCTTTTGTCTGCTGACTTTTTCGTTTATGTATTGTTAGGAAATTAGTATTTGGAATCCCTTAACTAGCTCGAGACAAAATATAATCAAGTCACTGGCACTGAATATACAAATCCATTCATATTTCAGATAGTTCCTGCTGTGGAAAATCTCACACGTTCCTCATCAATGTTATATATTTTCATAAAATCATGCCAATTGGTTTTTGTTCTGCAAATAGTACCTGCCAGCTGGTTAATTTTTATTTTTTTGCGGTTTCAACTAATTGAGGATTACTTTCTGTCATTTCTCATGAAAGAAGTACTCGTGATATTATTGTGCCCTTTTTATTAACTGTATTTTCATGATGTTAAAGAATGACAAAAGTCCCACATCGGTGGTAATGAGATGGGTAGAATCTTTATAAGGCTTAGGTAATTCTCCTTCCTTTGAGCTAGCTTTTGGGTGTGAGTTAGGCCTAAGACCTAATTAACATGGTATCAGAGCAGGGCCCGTCTCACCCGTTGTCGGGGCCCCCAAAATTAAAATTGCCCATGCACCAGATGCTAAAGCATTGGGCGTGAGGTGGGGTGTTAAAGAATGACAAAAGTCCCACATCGGTGGTTAATGAGATGAGTTGACTCCTTATGAGGCTTGGATAATTTTCCTCCCTTTGAGCTAGCTTTTGGGGTTGAGTTATGTCTAAGAACTAATTCAACGCATGATTGATGCATGAATGCGACTATTTGGTCACCACAGGTTTATTTTATTTTTTTGGTATTTCCTTGTTTGTGTCAACAACATATACTGTTTTGCACCCAGAGTTTGGGTCAAAACATATCTGAAATGACATAGCTTTCTTTTTTTGTTCCCATGTGCAGGTTTTTCTCTATTAAGCCTAAATATCTTTGAGATTGTTTTTATTTTTAAAAAAAGAATTTATCTGCATCTGCATTTGCTTAAGCTAAAGGTATCTTTCATGTTGCTAGGTTGAATATAAGAATCACTTTGTAGTACTTTTGGATGTTGAACCATGTTTAGTTTGTAGTTAAACAAGTGTTTATTTAATTCTGATGTTGTTGATACGTCTCTAAAGATGGGATGCTTTTATGACAACATTTGTTTCAGGTTTGCTACTATGGACAGCATTATCACTGTTTTGCCTACAGTCATGATCGTGGACAGTGGATCATGTATGATGACAAAACCGTAAAGGTAATATTCTGTTTCTTCCTATTTTTCTTTGTCATCTTTTACATAAGATTTTTTAATTATGGATATTTTATATTCAGGTAATTGGTGGCTGGGATGATGTTCTCGTCATGTGTGAGAGAGGGCATTTGCAACCGCAGGTCCTTTTCTTCGAAGCTGTAAACTAGTCCAGTCAGCAAATGGTACCTCTCTAATAGT-GAAAAGATGATCTGGATCAGCGTTGGTTTCTTTGAAGCTGTAATCTATTTCAGCTTAGAAAATATACCTCCCTAAGCTGCAACGAAGATATGCTACTGTGC-TTTCCATTCAATCGCTAAGGGGAACAACGATATTATGCATTG-TTGATCTGCAAAGTTA</genome_strand>
        <mrna_strand>GTTGGCTTGCGCGCCTGAGGTTGGTGGACGTGAGAAACTTAACTCTATTCATCACATTCTCTCTGCTCCACCACATATTTTCACAACTG...............................................................................................................................TTTTGGGTTGGCAGAATACTTGTGAGGATGTAGATGACATAAAAGCGACATTATCAGCTTTATCTACTGAAGTGGACATCGGCGTCCTTTATCGTGGTCTTGATCCGAAAAACAAACATCGCCTAATTTCTGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGCTACTATGGACAGCATTATCACTGTTTTGCCTACAGTCATGATCGTGGACAGTGGCTCATGTATGATGACAAAACCGTAAAG.............................................................................GTAATTGGTGGCTGGGATGATGTTCTCGTTATGTGTGAAAGAGGGCATTTGCAACCGCAGGTCCTTTTCTTCGAAGCTGTAAACTAGTCCAGCCAGCAAATGGTACCTCTCTAATAGTCAAAAAGATGATCTGGATCAGCGTTGGTTTCTTTGAAGCTGTAATCTATTTCAGCTTAGAAAA-ATACCTCCCTAAGCTGCAATGAAGATGTGCAACTGTGCTTTTCCATTCAATTGCCAAAGGCAATGACGATATTGTGCACTGTTTGATCTGCAAAGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E306876" ref_strand="+" ref_description="SGN-E306876 [cLEY-11-L2]">
      <seq>aggttatgtgtccagaaagctcatttgacgagcttctgaatcttgttgagatgaaccatcagttggcttgcgatcctgaggttggtggatgtgagaaacttaactatattcatcacattctctctgctccaccacatattttcacaacggttttgggttggcaaaatacttgtgaggatgtagatgacataaaagccacattatcagctttatctactgaagtggacatcggcgtcctttatcggggtcttgatccgaaaaacaaacattgcttaacttctgtggtttgctactatggacagcattatcactgttttgcctacagtcatgatcgtggacagtggatcatgtatgatgacaaaaccgtaaaggtaattggtggctgggatgatgttctcgtcatgtgtgagagagggcatttgcaaccgcaggtccttttcttcgaagctgtaaactagtccagtcagcaaatggtacctctctaatagtgaaaagatgatctggatcagcgttggtttctttgaagctgtaatctatttcagcttagaaaatatacctccctaagctgcaacgaagatatgctactgtgctttccattcaatcgctaaggggaacaacgatattatgcattgttgatctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="28435" stop="25872"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28135" g_stop="27986" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="150" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27985" i_stop="27859" i_length="127">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27858" g_stop="27725" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="284" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27724" i_stop="26606" i_length="1119">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26605" g_stop="26519" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="371" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26518" i_stop="26442" i_length="77">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26441" g_stop="26172" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="641" r_length="270" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E306876" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>641</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E306876" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28135" e_stop="27986"/>
          <exon e_start="27858" e_stop="27725"/>
          <exon e_start="26605" e_stop="26519"/>
          <exon e_start="26441" e_stop="26172"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTTATGTGTCCAGAAAGCTCATTTGACGAGCTTCTGAATCTTGTTGAGATGAACCATCAGTTGGCTTGCGATCCTGAGGTTGGTGGATGTGAGAAACTTAACTATATTCATCACATTCTCTCTGCTCCACCACATATTTTCACAACGGGTAACTAGTTTTGATGTTTTCCCCCTTCCCTCCTTTCTCTAATATGTTTTGGTTGCCAAATGGGTAATGTAATTTTATTTAGAGAATCTATTTGTTTCTAATGTGACTTGTTTCTTCCTCCCCACAGTTTTGGGTTGGCAAAATACTTGTGAGGATGTAGATGACATAAAAGCCACATTATCAGCTTTATCTACTGAAGTGGACATCGGCGTCCTTTATCGGGGTCTTGATCCGAAAAACAAACATTGCTTAACTTCTGTGGTAATGTTTCTTTTTCTTTTGTCTGCTGACTTTTTCGTTTATGTATTGTTAGGAAATTAGTATTTGGAATCCCTTAACTAGCTCGAGACAAAATATAATCAAGTCACTGGCACTGAATATACAAATCCATTCATATTTCAGATAGTTCCTGCTGTGGAAAATCTCACACGTTCCTCATCAATGTTATATATTTTCATAAAATCATGCCAATTGGTTTTTGTTCTGCAAATAGTACCTGCCAGCTGGTTAATTTTTATTTTTTTGCGGTTTCAACTAATTGAGGATTACTTTCTGTCATTTCTCATGAAAGAAGTACTCGTGATATTATTGTGCCCTTTTTATTAACTGTATTTTCATGATGTTAAAGAATGACAAAAGTCCCACATCGGTGGTAATGAGATGGGTAGAATCTTTATAAGGCTTAGGTAATTCTCCTTCCTTTGAGCTAGCTTTTGGGTGTGAGTTAGGCCTAAGACCTAATTAACATGGTATCAGAGCAGGGCCCGTCTCACCCGTTGTCGGGGCCCCCAAAATTAAAATTGCCCATGCACCAGATGCTAAAGCATTGGGCGTGAGGTGGGGTGTTAAAGAATGACAAAAGTCCCACATCGGTGGTTAATGAGATGAGTTGACTCCTTATGAGGCTTGGATAATTTTCCTCCCTTTGAGCTAGCTTTTGGGGTTGAGTTATGTCTAAGAACTAATTCAACGCATGATTGATGCATGAATGCGACTATTTGGTCACCACAGGTTTATTTTATTTTTTTGGTATTTCCTTGTTTGTGTCAACAACATATACTGTTTTGCACCCAGAGTTTGGGTCAAAACATATCTGAAATGACATAGCTTTCTTTTTTTGTTCCCATGTGCAGGTTTTTCTCTATTAAGCCTAAATATCTTTGAGATTGTTTTTATTTTTAAAAAAAGAATTTATCTGCATCTGCATTTGCTTAAGCTAAAGGTATCTTTCATGTTGCTAGGTTGAATATAAGAATCACTTTGTAGTACTTTTGGATGTTGAACCATGTTTAGTTTGTAGTTAAACAAGTGTTTATTTAATTCTGATGTTGTTGATACGTCTCTAAAGATGGGATGCTTTTATGACAACATTTGTTTCAGGTTTGCTACTATGGACAGCATTATCACTGTTTTGCCTACAGTCATGATCGTGGACAGTGGATCATGTATGATGACAAAACCGTAAAGGTAATATTCTGTTTCTTCCTATTTTTCTTTGTCATCTTTTACATAAGATTTTTTAATTATGGATATTTTATATTCAGGTAATTGGTGGCTGGGATGATGTTCTCGTCATGTGTGAGAGAGGGCATTTGCAACCGCAGGTCCTTTTCTTCGAAGCTGTAAACTAGTCCAGTCAGCAAATGGTACCTCTCTAATAGTGAAAAGATGATCTGGATCAGCGTTGGTTTCTTTGAAGCTGTAATCTATTTCAGCTTAGAAAATATACCTCCCTAAGCTGCAACGAAGATATGCTACTGTGCTTTCCATTCAATCGCTAAGGGGAACAACGATATTATGCATTGTTGATCTGC</genome_strand>
        <mrna_strand>AGGTTATGTGTCCAGAAAGCTCATTTGACGAGCTTCTGAATCTTGTTGAGATGAACCATCAGTTGGCTTGCGATCCTGAGGTTGGTGGATGTGAGAAACTTAACTATATTCATCACATTCTCTCTGCTCCACCACATATTTTCACAACGG...............................................................................................................................TTTTGGGTTGGCAAAATACTTGTGAGGATGTAGATGACATAAAAGCCACATTATCAGCTTTATCTACTGAAGTGGACATCGGCGTCCTTTATCGGGGTCTTGATCCGAAAAACAAACATTGCTTAACTTCTGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGCTACTATGGACAGCATTATCACTGTTTTGCCTACAGTCATGATCGTGGACAGTGGATCATGTATGATGACAAAACCGTAAAG.............................................................................GTAATTGGTGGCTGGGATGATGTTCTCGTCATGTGTGAGAGAGGGCATTTGCAACCGCAGGTCCTTTTCTTCGAAGCTGTAAACTAGTCCAGTCAGCAAATGGTACCTCTCTAATAGTGAAAAGATGATCTGGATCAGCGTTGGTTTCTTTGAAGCTGTAATCTATTTCAGCTTAGAAAATATACCTCCCTAAGCTGCAACGAAGATATGCTACTGTGCTTTCCATTCAATCGCTAAGGGGAACAACGATATTATGCATTGTTGATCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E542114" ref_strand="+" ref_description="SGN-E542114 [TUS-63-E2]">
      <seq>gaaaaataagtcagggaaagattgcattaatgcttcctgtcttaccataacatctttccagaatagtattttagctccatttcctcttctgagtttgttgtttcctactagtttggtccagaaggatctcctattgtttccatgttgaaactctatatggcatagtgacctcattggtacaccactgggagtcctggccatacttgtgatgtctaacttctctccaaagagcctgttcttctttcacatatctccacaaccattttatcaagaggcactcgttatggatcctaagatccctaactccaagatcatctgagagcttaggtagctgcactgtttcccagttaattagatagcacccttcctttttttgtttccaaaccatagaaagtctcttctaagctataaaattagagcacatcctgtatttgaatctttgaaacaaagaaatgtgtttgaatcaatcaaatctatttccaagctaatttctgtttctgttagtaacagtgattggtgagctcaatcatctctttccatttcttcattggttaaactttaaaggagcaagtcatcttggttcagataagtgatatagtaattgtggcattacttcgtcatactcaagttgacctgcaatcctctgtagattttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="30762" stop="29508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30462" g_stop="29808" g_length="655"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="655" r_length="655" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E542114" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>655</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E542114" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30462" e_stop="29808"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAATAAGTCAGGGAAAGATTGCATTAATGCTTCCTGTCTTACCATAACATCTTTCCAGAATAGTATTTTAGCTCCATTTCCTCTTCTGAGTTTGTTGTTTCCTACTAGTTTGGTCCAGAAGGATCTCCTATTGTTTCCATGTTGAAACTCTATATGGCATAGTGACCTCATTGGTACACCACTGGGAGTCCTGGCCATACTTGTGATGTCTAACTTCTCTCCAAAGAGCCTGTTCTTCTTTCACATATCTCCACAACCATTTTATCAAGAGGCACTCGTTATGGATCCTAAGATCCCTAACTCCAAGATCATCTGAGAGCTTAGGTAGCTGCACTGTTTCCCAGTTAATTAGATAGCACCCTTCCTTTTTTTGTTTCCAAACCATAGAAAGTCTCTTCTAAGCTATAAAATTAGAGCACATCCTGTATTTGAATCTTTGAAACAAAGAAATGTGTTTGAATCAATCAAATCTATTTCCAAGCTAATTTCTGTTTCTGTTAGTAACAGTGATTGGTGAGCTCAATCATCTCTTTCCATTTCTTCATTGGTTAAACTTTAAAGGAGCAAGTCATCTTGGTTCAGATAAGTGATATAGTAATTGTGGCATTACTTCGTCATACTCAAGTTGACCTGCAATCCTCTGTAGATTTTT</genome_strand>
        <mrna_strand>GAAAAATAAGTCAGGGAAAGATTGCATTAATGCTTCCTGTCTTACCATAACATCTTTCCAGAATAGTATTTTAGCTCCATTTCCTCTTCTGAGTTTGTTGTTTCCTACTAGTTTGGTCCAGAAGGATCTCCTATTGTTTCCATGTTGAAACTCTATATGGCATAGTGACCTCATTGGTACACCACTGGGAGTCCTGGCCATACTTGTGATGTCTAACTTCTCTCCAAAGAGCCTGTTCTTCTTTCACATATCTCCACAACCATTTTATCAAGAGGCACTCGTTATGGATCCTAAGATCCCTAACTCCAAGATCATCTGAGAGCTTAGGTAGCTGCACTGTTTCCCAGTTAATTAGATAGCACCCTTCCTTTTTTTGTTTCCAAACCATAGAAAGTCTCTTCTAAGCTATAAAATTAGAGCACATCCTGTATTTGAATCTTTGAAACAAAGAAATGTGTTTGAATCAATCAAATCTATTTCCAAGCTAATTTCTGTTTCTGTTAGTAACAGTGATTGGTGAGCTCAATCATCTCTTTCCATTTCTTCATTGGTTAAACTTTAAAGGAGCAAGTCATCTTGGTTCAGATAAGTGATATAGTAATTGTGGCATTACTTCGTCATACTCAAGTTGACCTGCAATCCTCTGTAGATTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E449546" ref_strand="+" ref_description="SGN-E449546 [cSTS-6-H4]">
      <seq>gagaagtctaagcatggccatgaaaaaacaaaggacaagaaaaagaaacaagagtatcgaaaagcaaaagatttgaagcctaacagtggtaacgaattgcatgtgcttcaccatgagactgtggatcatgtctcatctccacttgctcatgatggagatgatcaagagagtgaaattcctcaaactggtaattccttagatctacaggaagaggagtacaaacgtatgattgagcttgaagccgaggaaaggaagcttgaagaaactttagagtatcaaagaagaattgagaatgaagctaagctgaaacatctggctgagcaacataagagaactgcaagaacaattcaagagaatatggatgcagctacaaatcccgagtcttacccgtatcaaaaaatgaatcctgacacttacttgaagggttgtgatattgatcagaaaatcaatgagcaatggaagagtagtgagaagaacaatgtactattgaactgtgtagaaggtctttcaaagaactttccagaaagaatggcacaaagagatggattgtcaaacaaaggaactncagaggatggtatattgatgtctgataagcgatctgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="34118" stop="32427"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33818" g_stop="33741" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="0.936"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33740" i_stop="33651" i_length="90">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33650" g_stop="33598" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="131" r_length="53" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="33597" i_stop="33484" i_length="114">
            <donor d_prob="0.973" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33483" g_stop="33141" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="474" r_length="343" r_score="0.950"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33140" i_stop="32970" i_length="171">
            <donor d_prob="0.895" d_score="0.94"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="32969" g_stop="32900" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="475" r_stop="544" r_length="70" r_score="0.971"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="32899" i_stop="32786" i_length="114">
            <donor d_prob="0.650" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="32785" g_stop="32727" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="603" r_length="59" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E449546" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>603</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E449546" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33818" e_stop="33741"/>
          <exon e_start="33650" e_stop="33598"/>
          <exon e_start="33483" e_stop="33141"/>
          <exon e_start="32969" e_stop="32900"/>
          <exon e_start="32785" e_stop="32727"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAGTCTAAACATGCCCATGAAAAGACAAAGGACAAGAAAAAGAAACAAGAGTATCGAAAAGCAAAAGATTCAAAGGTTTGAGCTGTGGGCCAGATTATTGTTTCTGCAGCAGTTGTTTGGTGTATTGCTGGGGGAAGAATAACTTGTTTCCTCTTACCTGTGCAGCCTAACAGTGGTAATGAATTGCATGTGCTTCACCATGAGACTGTGGATCATGTGTATGTCTCTTCCTAGTTCCTAACGACATATTTCTCCATTTACGTACCCTCTAATTTGGCATCTTAGCAAACCATTTACGCCTTTAATATTTCCAAGTGTATGTTTTGGTGCAGCTCATCTCCACTTGCTCATGATGGAGATGATCAAGAGAGTGAAATTCCTCAAACTGGTAATTCCTTAGATCTACAGGAAGAGGAGTACAAACGTATGATTGAGCTTGAAGCCGAGGAAAGGAAGCTAGAAGAAACTTTAGAGTATCAAAGAAGAATTGAGAATGAGGCTAAGCTGAAACATTTGGCTGAGCAACATAAGAGAACTGTAAGAGCAGTTCAAGAGAATATGGATGCAGTTACAAATCCTGAGTCCTACCCGTATCAAAAGTCGAGTCCTGACACTTACTTGAAGAGTTGTGATATTGATCAGAAAGTCAACGAGCAATGGAAGAGAAGTGAGAAGGTTACATTCTGATTGGCTTTTTACTGTTAGAGAATTTTACATTCTGGATTTCTCATATCATTTAAAGTTATAACTAAGGCCTCGAAATGCCTTGATGTTATTTTCAAGGATGTTGCTAAAATTTGGTTGGCCCTATGAAGTGATTGTAATATTTGACTTTCCTTGATGCAGAACAATGTACTATTGAACAGTGTAGAAGGTCTTTCAAAGAACTTTCCAGAAAGAATGTCACAAAGAGATGGTATCATCTTGATTTGTGAATGGAATAATTTATGCTTCCCAAATAATCTGTACCAACTGTTCCAGGGTTAGGATTATGTCATCTGAACATGCTATCATTTTTTCTCTGATTCAGGATTGTCAAACAAAGGAACTCCAGAGGATGGTATATTGATGTCTGATAAGCGATCTGGA</genome_strand>
        <mrna_strand>GAGAAGTCTAAGCATGGCCATGAAAAAACAAAGGACAAGAAAAAGAAACAAGAGTATCGAAAAGCAAAAGATTTGAAG..........................................................................................CCTAACAGTGGTAACGAATTGCATGTGCTTCACCATGAGACTGTGGATCATGT..................................................................................................................CTCATCTCCACTTGCTCATGATGGAGATGATCAAGAGAGTGAAATTCCTCAAACTGGTAATTCCTTAGATCTACAGGAAGAGGAGTACAAACGTATGATTGAGCTTGAAGCCGAGGAAAGGAAGCTTGAAGAAACTTTAGAGTATCAAAGAAGAATTGAGAATGAAGCTAAGCTGAAACATCTGGCTGAGCAACATAAGAGAACTGCAAGAACAATTCAAGAGAATATGGATGCAGCTACAAATCCCGAGTCTTACCCGTATCAAAAAATGAATCCTGACACTTACTTGAAGGGTTGTGATATTGATCAGAAAATCAATGAGCAATGGAAGAGTAGTGAGAAG...........................................................................................................................................................................AACAATGTACTATTGAACTGTGTAGAAGGTCTTTCAAAGAACTTTCCAGAAAGAATGGCACAAAGAGATG..................................................................................................................GATTGTCAAACAAAGGAACTNCAGAGGATGGTATATTGATGTCTGATAAGCGATCTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E326102" ref_strand="+" ref_description="SGN-E326102 [cTOC-16-N9]">
      <seq>agaagtctaaacatgcccatgaaaagacaaaggacaagaaaaagaaacaagagtatcgaaaagcaaaagattcaaagcctaacagtggtaatgaattgcatgtgcttcaccatgagactgtggatcatgtctcatctccacttgctcatgatggagatgatcaagagagtgaaattcctcaaactggtaattccttagatctacaggaagaggagtacaaacgtatgattgagcttgaagccgaggaaaggaagctagaagaaactttagagtatcaaagaagaattgagaatgaggctaagctgaaacatttggctgagcaacataagagaactgtaagagcagttcaagagaatatggatgcagttacaaatcctgagtcctacccgtatcaaaagtcgagtcctgacacttacttgaagagttgtgatattgatcagaaagtcaacgagcaatggaagagaagtgagaagaacaatgtactattgaacagtgtagaaggtctttcaaagaactttccagaaagaatgtcacaaagagatggattgtcaaacaaaggaactccagaggatggtatattgatgtctgataagcgatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="34117" stop="32430"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33817" g_stop="33741" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33740" i_stop="33651" i_length="90">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33650" g_stop="33598" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="130" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="33597" i_stop="33484" i_length="114">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33483" g_stop="33141" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="473" r_length="343" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33140" i_stop="32970" i_length="171">
            <donor d_prob="0.895" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="32969" g_stop="32900" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="474" r_stop="543" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="32899" i_stop="32786" i_length="114">
            <donor d_prob="0.650" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="32785" g_stop="32730" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="544" r_stop="599" r_length="56" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E326102" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>599</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E326102" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33817" e_stop="33741"/>
          <exon e_start="33650" e_stop="33598"/>
          <exon e_start="33483" e_stop="33141"/>
          <exon e_start="32969" e_stop="32900"/>
          <exon e_start="32785" e_stop="32730"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGTCTAAACATGCCCATGAAAAGACAAAGGACAAGAAAAAGAAACAAGAGTATCGAAAAGCAAAAGATTCAAAGGTTTGAGCTGTGGGCCAGATTATTGTTTCTGCAGCAGTTGTTTGGTGTATTGCTGGGGGAAGAATAACTTGTTTCCTCTTACCTGTGCAGCCTAACAGTGGTAATGAATTGCATGTGCTTCACCATGAGACTGTGGATCATGTGTATGTCTCTTCCTAGTTCCTAACGACATATTTCTCCATTTACGTACCCTCTAATTTGGCATCTTAGCAAACCATTTACGCCTTTAATATTTCCAAGTGTATGTTTTGGTGCAGCTCATCTCCACTTGCTCATGATGGAGATGATCAAGAGAGTGAAATTCCTCAAACTGGTAATTCCTTAGATCTACAGGAAGAGGAGTACAAACGTATGATTGAGCTTGAAGCCGAGGAAAGGAAGCTAGAAGAAACTTTAGAGTATCAAAGAAGAATTGAGAATGAGGCTAAGCTGAAACATTTGGCTGAGCAACATAAGAGAACTGTAAGAGCAGTTCAAGAGAATATGGATGCAGTTACAAATCCTGAGTCCTACCCGTATCAAAAGTCGAGTCCTGACACTTACTTGAAGAGTTGTGATATTGATCAGAAAGTCAACGAGCAATGGAAGAGAAGTGAGAAGGTTACATTCTGATTGGCTTTTTACTGTTAGAGAATTTTACATTCTGGATTTCTCATATCATTTAAAGTTATAACTAAGGCCTCGAAATGCCTTGATGTTATTTTCAAGGATGTTGCTAAAATTTGGTTGGCCCTATGAAGTGATTGTAATATTTGACTTTCCTTGATGCAGAACAATGTACTATTGAACAGTGTAGAAGGTCTTTCAAAGAACTTTCCAGAAAGAATGTCACAAAGAGATGGTATCATCTTGATTTGTGAATGGAATAATTTATGCTTCCCAAATAATCTGTACCAACTGTTCCAGGGTTAGGATTATGTCATCTGAACATGCTATCATTTTTTCTCTGATTCAGGATTGTCAAACAAAGGAACTCCAGAGGATGGTATATTGATGTCTGATAAGCGATCT</genome_strand>
        <mrna_strand>AGAAGTCTAAACATGCCCATGAAAAGACAAAGGACAAGAAAAAGAAACAAGAGTATCGAAAAGCAAAAGATTCAAAG..........................................................................................CCTAACAGTGGTAATGAATTGCATGTGCTTCACCATGAGACTGTGGATCATGT..................................................................................................................CTCATCTCCACTTGCTCATGATGGAGATGATCAAGAGAGTGAAATTCCTCAAACTGGTAATTCCTTAGATCTACAGGAAGAGGAGTACAAACGTATGATTGAGCTTGAAGCCGAGGAAAGGAAGCTAGAAGAAACTTTAGAGTATCAAAGAAGAATTGAGAATGAGGCTAAGCTGAAACATTTGGCTGAGCAACATAAGAGAACTGTAAGAGCAGTTCAAGAGAATATGGATGCAGTTACAAATCCTGAGTCCTACCCGTATCAAAAGTCGAGTCCTGACACTTACTTGAAGAGTTGTGATATTGATCAGAAAGTCAACGAGCAATGGAAGAGAAGTGAGAAG...........................................................................................................................................................................AACAATGTACTATTGAACAGTGTAGAAGGTCTTTCAAAGAACTTTCCAGAAAGAATGTCACAAAGAGATG..................................................................................................................GATTGTCAAACAAAGGAACTCCAGAGGATGGTATATTGATGTCTGATAAGCGATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E423018" ref_strand="+" ref_description="SGN-E423018 [STM-41-K8]">
      <seq>gagaagtctaagcatggccatgaaaaaacaaaggacaagaaaaagaaacaagagtatcgaaaagcaaaagatttgaagcctaacagtggtaacgaattgcatgtgcttcaccatgagactgtggatcatgtctcatctccacttgctcatgatggagatgatcaagagagtgaaattcctcaaactggtaattccttagatctacaggaagaggagtacaaacgtatgattgagcttgaagccgaggaaaggaagcttgaagaaactttagagtatcaaagaagaattgagaatgaagctaagctgaaacatctggctgagcaacataagagaactgcaagaacaattcaagagaatatggatgcagctacaaatcccgagccttacccgtatcaaaaaatgaatcctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="34118" stop="32917"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33818" g_stop="33741" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="0.936"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33740" i_stop="33651" i_length="90">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33650" g_stop="33598" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="131" r_length="53" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="33597" i_stop="33484" i_length="114">
            <donor d_prob="0.973" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33483" g_stop="33205" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="410" r_length="279" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E423018" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>410</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E423018" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33818" e_stop="33741"/>
          <exon e_start="33650" e_stop="33598"/>
          <exon e_start="33483" e_stop="33205"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAGTCTAAACATGCCCATGAAAAGACAAAGGACAAGAAAAAGAAACAAGAGTATCGAAAAGCAAAAGATTCAAAGGTTTGAGCTGTGGGCCAGATTATTGTTTCTGCAGCAGTTGTTTGGTGTATTGCTGGGGGAAGAATAACTTGTTTCCTCTTACCTGTGCAGCCTAACAGTGGTAATGAATTGCATGTGCTTCACCATGAGACTGTGGATCATGTGTATGTCTCTTCCTAGTTCCTAACGACATATTTCTCCATTTACGTACCCTCTAATTTGGCATCTTAGCAAACCATTTACGCCTTTAATATTTCCAAGTGTATGTTTTGGTGCAGCTCATCTCCACTTGCTCATGATGGAGATGATCAAGAGAGTGAAATTCCTCAAACTGGTAATTCCTTAGATCTACAGGAAGAGGAGTACAAACGTATGATTGAGCTTGAAGCCGAGGAAAGGAAGCTAGAAGAAACTTTAGAGTATCAAAGAAGAATTGAGAATGAGGCTAAGCTGAAACATTTGGCTGAGCAACATAAGAGAACTGTAAGAGCAGTTCAAGAGAATATGGATGCAGTTACAAATCCTGAGTCCTACCCGTATCAAAAGTCGAGTCCTGA</genome_strand>
        <mrna_strand>GAGAAGTCTAAGCATGGCCATGAAAAAACAAAGGACAAGAAAAAGAAACAAGAGTATCGAAAAGCAAAAGATTTGAAG..........................................................................................CCTAACAGTGGTAACGAATTGCATGTGCTTCACCATGAGACTGTGGATCATGT..................................................................................................................CTCATCTCCACTTGCTCATGATGGAGATGATCAAGAGAGTGAAATTCCTCAAACTGGTAATTCCTTAGATCTACAGGAAGAGGAGTACAAACGTATGATTGAGCTTGAAGCCGAGGAAAGGAAGCTTGAAGAAACTTTAGAGTATCAAAGAAGAATTGAGAATGAAGCTAAGCTGAAACATCTGGCTGAGCAACATAAGAGAACTGCAAGAACAATTCAAGAGAATATGGATGCAGCTACAAATCCCGAGCCTTACCCGTATCAAAAAATGAATCCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E603849" ref_strand="+" ref_description="SGN-E603849 [67038]">
      <seq>agaactcatagatagtgacaacgacactacaattatcagcaataggcctgagttggatgctatatcaaatgttcttaaggaagcagaatctctcaatgtaaatcaattcggatttgacgaaacttacggtggtggaacgtctcaattttgtgacttggagtctggcgaagaggatgattggagactgaaggactaccttcatcaggtggactctagtgtggaagttgcaatacagagacagaaggaacatatctccattgagcttagcaaaattgatgcacgaatcatgcgggtggttaccgggatgcagcagttggagtcaaagcttgagccggcttctgcccaagattaccggcgaattttagtgcctctattgaaatcatttctgcgggcacacttggaagacctggccgagaaggacgctacagaaaaatctgatgctacaagggaagcttttctggctgaacttgcacgtgattccgaaaagagttcaagtgggggaaatgagaagtctaagcatgggcatgaaaagacaaaggacaagaaaaagaaacaagagtatcgaaaaggaaaagattcgaaggctaacagtggtaacgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="34849" stop="33438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34549" g_stop="34288" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="262" r_length="262" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34287" i_stop="34194" i_length="94">
            <donor d_prob="0.669" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34193" g_stop="34065" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="391" r_length="129" r_score="0.961"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34064" i_stop="33933" i_length="132">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33932" g_stop="33741" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="583" r_length="192" r_score="0.943"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33740" i_stop="33651" i_length="90">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="33650" g_stop="33632" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="584" r_stop="602" r_length="19" r_score="0.895"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E603849" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E603849" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34549" e_stop="34288"/>
          <exon e_start="34193" e_stop="34065"/>
          <exon e_start="33932" e_stop="33741"/>
          <exon e_start="33650" e_stop="33632"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAACTCATAGATAGTGACAATGATACTACAATTATCAGCAATAGGCCTGAGTTGGATGCTATATCAAATGTTCTTAAAGAAGCAGAATCTCTCAATGTAAATCAATTTGGATTTGACGAAACTTACGGTGGTGGAACGTCTCAATTTTGTGACTTGGAGTCTGGCGAAGAGGATGATTGGAGACTGAAGGACTACCTTCATCAGGTGGACTCTAGTGTGGAAGTTGCAATACAGAGACAGAAGGAACATATCTCCATTGAGGTTGGTGGATCAGTTACAGTACAACGTTCTTTTTCTTTTTGTTTTTTCGGGCATTGTTTGATTGTTGTTTGATCTTACAATTTCATGGATGCAGCTTAGCAAAATTGATGCACGAATTATGAGGGTGGTTACCGGGATGCAGCAGTTGGAGTCGAAGCTTGAGCCGGCTTCTTCCCAGGATTACCGGCGAATTTTAGTGCCTCTATTGAAATCATTTCTGCGGGTATCTGCTGTTGTGATGTACCTATGTTGCTCTTGAAATCTTCTACTGCTGTTTTGTACTCCTGACTTCTTGTCGTTTCGCCTTTCTCATTCTTTGTTTGATTAGGATGATTGTTTTTTTTTAAATTCTTAGGCACACTTGGAGGACCTGGCCGAGAAGGATGCTACCGAGAAATCTGATGCCACAAGGGAAGCTTTTCTGGCTGAACTTGCACGTGATTCCGAAAAGAGTTCAAGTTGGGGAAATGAGAAGTCTAAACATGCCCATGAAAAGACAAAGGACAAGAAAAAGAAACAAGAGTATCGAAAAGCAAAAGATTCAAAGGTTTGAGCTGTGGGCCAGATTATTGTTTCTGCAGCAGTTGTTTGGTGTATTGCTGGGGGAAGAATAACTTGTTTCCTCTTACCTGTGCAGCCTAACAGTGGTAATGAAT</genome_strand>
        <mrna_strand>AGAACTCATAGATAGTGACAACGACACTACAATTATCAGCAATAGGCCTGAGTTGGATGCTATATCAAATGTTCTTAAGGAAGCAGAATCTCTCAATGTAAATCAATTCGGATTTGACGAAACTTACGGTGGTGGAACGTCTCAATTTTGTGACTTGGAGTCTGGCGAAGAGGATGATTGGAGACTGAAGGACTACCTTCATCAGGTGGACTCTAGTGTGGAAGTTGCAATACAGAGACAGAAGGAACATATCTCCATTGAG..............................................................................................CTTAGCAAAATTGATGCACGAATCATGCGGGTGGTTACCGGGATGCAGCAGTTGGAGTCAAAGCTTGAGCCGGCTTCTGCCCAAGATTACCGGCGAATTTTAGTGCCTCTATTGAAATCATTTCTGCGG....................................................................................................................................GCACACTTGGAAGACCTGGCCGAGAAGGACGCTACAGAAAAATCTGATGCTACAAGGGAAGCTTTTCTGGCTGAACTTGCACGTGATTCCGAAAAGAGTTCAAGTGGGGGAAATGAGAAGTCTAAGCATGGGCATGAAAAGACAAAGGACAAGAAAAAGAAACAAGAGTATCGAAAAGGAAAAGATTCGAAG..........................................................................................GCTAACAGTGGTAACGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E474846" ref_strand="+" ref_description="SGN-E474846 [cSTB-38-K17]">
      <seq>aaaaagagaaaatgaaacagaatttgtccgacaaagctacgattctgtcttgagaaagcgacgagaagaactcatagatagtgacaacgacactacaattatcagcaataggcctgagttggatgctatatcaaatgttcttaaggaagcagaatctctcaatgtaaatcaattcggatttgacgaaacttacggtggtggaacgtctcaattttgtgacttggagtctggcgaagaggatgattggagactgaaggactaccttcatcaagtggactctagtgtggaagttgcaatacagagacagaaggaacatatctccattgagcttagcaaaattgatgcacggatcatgcgggtggttaccgggatgcagcagttggagtcgaagcttgagccggcttctgcccaagattaccggcgaattttagtgcctctactgaaatcatttctgcgggcacacttggaggacctagccgagaaagacgctacggaaaaatctgatgctacaagggaagcttttctggctgaacttgcacgtgattccgaaaagagttcaagtgggggaaatgagaagtctaagcatggccatgaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="34915" stop="33493"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34615" g_stop="34288" g_length="328"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="328" r_length="328" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34287" i_stop="34194" i_length="94">
            <donor d_prob="0.669" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34193" g_stop="34065" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="457" r_length="129" r_score="0.953"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34064" i_stop="33933" i_length="132">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33932" g_stop="33793" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="597" r_length="140" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E474846" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E474846" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34615" e_stop="34288"/>
          <exon e_start="34193" e_stop="34065"/>
          <exon e_start="33932" e_stop="33793"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGAGAACATGAAACAGAATTTGTCCGACAAAGCTACGATTCTATCTTGAGAAAGCGACGAGAACAACTCATAGATAGTGACAATGATACTACAATTATCAGCAATAGGCCTGAGTTGGATGCTATATCAAATGTTCTTAAAGAAGCAGAATCTCTCAATGTAAATCAATTTGGATTTGACGAAACTTACGGTGGTGGAACGTCTCAATTTTGTGACTTGGAGTCTGGCGAAGAGGATGATTGGAGACTGAAGGACTACCTTCATCAGGTGGACTCTAGTGTGGAAGTTGCAATACAGAGACAGAAGGAACATATCTCCATTGAGGTTGGTGGATCAGTTACAGTACAACGTTCTTTTTCTTTTTGTTTTTTCGGGCATTGTTTGATTGTTGTTTGATCTTACAATTTCATGGATGCAGCTTAGCAAAATTGATGCACGAATTATGAGGGTGGTTACCGGGATGCAGCAGTTGGAGTCGAAGCTTGAGCCGGCTTCTTCCCAGGATTACCGGCGAATTTTAGTGCCTCTATTGAAATCATTTCTGCGGGTATCTGCTGTTGTGATGTACCTATGTTGCTCTTGAAATCTTCTACTGCTGTTTTGTACTCCTGACTTCTTGTCGTTTCGCCTTTCTCATTCTTTGTTTGATTAGGATGATTGTTTTTTTTTAAATTCTTAGGCACACTTGGAGGACCTGGCCGAGAAGGATGCTACCGAGAAATCTGATGCCACAAGGGAAGCTTTTCTGGCTGAACTTGCACGTGATTCCGAAAAGAGTTCAAGTTGGGGAAATGAGAAGTCTAAACATGCCCATGAAAA</genome_strand>
        <mrna_strand>AAAAAGAGAAAATGAAACAGAATTTGTCCGACAAAGCTACGATTCTGTCTTGAGAAAGCGACGAGAAGAACTCATAGATAGTGACAACGACACTACAATTATCAGCAATAGGCCTGAGTTGGATGCTATATCAAATGTTCTTAAGGAAGCAGAATCTCTCAATGTAAATCAATTCGGATTTGACGAAACTTACGGTGGTGGAACGTCTCAATTTTGTGACTTGGAGTCTGGCGAAGAGGATGATTGGAGACTGAAGGACTACCTTCATCAAGTGGACTCTAGTGTGGAAGTTGCAATACAGAGACAGAAGGAACATATCTCCATTGAG..............................................................................................CTTAGCAAAATTGATGCACGGATCATGCGGGTGGTTACCGGGATGCAGCAGTTGGAGTCGAAGCTTGAGCCGGCTTCTGCCCAAGATTACCGGCGAATTTTAGTGCCTCTACTGAAATCATTTCTGCGG....................................................................................................................................GCACACTTGGAGGACCTAGCCGAGAAAGACGCTACGGAAAAATCTGATGCTACAAGGGAAGCTTTTCTGGCTGAACTTGCACGTGATTCCGAAAAGAGTTCAAGTGGGGGAAATGAGAAGTCTAAGCATGGCCATGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E465315" ref_strand="+" ref_description="SGN-E465315 [cPRO-20-B10]">
      <seq>cctgaagagaggagaaaagagattgaggttcgggtagctgctgctaggctgttgcagcagaagtcggaaactgtcaaatcacagaatgatggagataaaggttttgattcaactgcaggatcgggtcagagagcaggtgataggaggaagagtggaaatgcaaagaagaatgcttcttccacggagagaaggaagtgggtgcagtcattttggaattccataagtttggatgtgaagaaagaattgcttagaattagaatttcagatcttaagacatattttactgtttctaaggatcatttggctattgaagtgctttctgatgctcttccatttgccgagacccataaaacatgggagttctggagatgttgccggtgcaatgaaattttttctgattctcaatcacacgttcaccatgttgtgcatgatcacatgggagctttgctgcctaaaatgcagtcagttttgcctcaaattgttgagaatgagtgggctgagatgcttctgaactgttcttggaaaccattagatattaatgcggcagtgaaaatgcttgataag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="36453" stop="35290"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36153" g_stop="35590" g_length="564"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="564" r_length="564" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E465315" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>564</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E465315" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36153" e_stop="35590"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTGAAGAGAGAAGAAAAGAGATTGAGGTTCGGGTAGCTGCTGCTAGGCTGTTGCAGCAGAAGTCAGAAACTGTCAAATCACAGAATGATGTAGACAAAGGTTTGGATTCAACTGCAGGATCGGGTCAGAGAGCACGAGATAGGAGGTCCAGCGGAAATGCAAAGAAGAATACTTCTTCCACTGAGAGAAGAAAGTGGGTGCAGTCATATTGGAATTCCATAAGTTTGGATGTGAAGAAAGAATTGCTTAGAATTAGAATTTCAGATCTTAAGACACATTTTACTGCTTCTAAGGATCATTTGGCTATAGAAGTACTCTCTGATGCTCTTCCATTTGCCGAGACCCATAAAACATGGGAGTTCTGGAGATGTTGCCGGTGCAATGAAAATTTTGCTGATTCTCAATCACACGTTCATCATGTTGTGCATGATCACATGGGAGCTTTGCTGCCTAAAATGCAGTCAGTTTTGCCTCAAAATGTTGAGAATGAGTGGGCTGAGATGCTTCTGAACTGTTCTTGGAAACCATTAGATATTAATGCGGCAGTGAAAATGCTAGATAAG</genome_strand>
        <mrna_strand>CCTGAAGAGAGGAGAAAAGAGATTGAGGTTCGGGTAGCTGCTGCTAGGCTGTTGCAGCAGAAGTCGGAAACTGTCAAATCACAGAATGATGGAGATAAAGGTTTTGATTCAACTGCAGGATCGGGTCAGAGAGCAGGTGATAGGAGGAAGAGTGGAAATGCAAAGAAGAATGCTTCTTCCACGGAGAGAAGGAAGTGGGTGCAGTCATTTTGGAATTCCATAAGTTTGGATGTGAAGAAAGAATTGCTTAGAATTAGAATTTCAGATCTTAAGACATATTTTACTGTTTCTAAGGATCATTTGGCTATTGAAGTGCTTTCTGATGCTCTTCCATTTGCCGAGACCCATAAAACATGGGAGTTCTGGAGATGTTGCCGGTGCAATGAAATTTTTTCTGATTCTCAATCACACGTTCACCATGTTGTGCATGATCACATGGGAGCTTTGCTGCCTAAAATGCAGTCAGTTTTGCCTCAAATTGTTGAGAATGAGTGGGCTGAGATGCTTCTGAACTGTTCTTGGAAACCATTAGATATTAATGCGGCAGTGAAAATGCTTGATAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E247713" ref_strand="+" ref_description="SGN-E247713 [cLEF-42-G12]">
      <seq>tccatacttttatttgtctctctctttcatgcatctgtggggtgcataatcccctgtacccattacttctctgctcataaatcacagcttccttcttctttttcttcttcccccattccaaacaccctttaaagttgcaacctttcactttcttgatttcttcttttccattaattagtccctgcagatccctgatgtagcccttgttctttcacagcctgctctgagttcaatctcagctggctttctcttgcctaaatcacattcttgattcacaaaaataacaatagtaaagatgcaatctttgatatttttgctgaccaattgataaaggggtttcaagaattcttgttaatatggcctttgcagctcagcagaagaaggctattcattccatgttagcaaacaagctgacccatctcaaaatccctgactcttcttcatcatcatctcctcctcctactgatccagactttgatttttctgatgtttttggtgctcctacctctccttcatcttcttccagttttctaactgacccacanatcattcatagtaggtcccactcttttgtgggtccatctccaaggatcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61563" stop="62758"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61863" g_stop="62458" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E247713" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E247713" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61863" e_stop="62458"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCATACTTTCATTTGTCTCTCTCTTTCATGCATCTGTAATTTGCAAAATCCCCTGTACCCATTACTTCTCTGCTCATAAATCACAGCTTCCTTCTTCTTTTTCTTCTTCCCCCATTCCAAACACCCTTTAAAGTTGCAACCTTTCACTTTCTTGATTTCTTCTTTTCCATTAATTAGTCCCTGCAGATCCCTGATGTAGCCCTTGTTCTTTCACAGCCTGCTCTGAGTTCAATCTCAGCTGGCTTTCTCTTGCCTAAATCACATTCTTGATTCACAAAAATAACAATAGTAAAGATGCAATCTTTGATATTTTTGCTGACCAATTGATAAAGGGGTTTCAAGAATTCTTGTTAATATGGCCTTTGCAGCTCAGCAGAAGAAGGCTATTCATTCCATGTTAGCAAACAAGCTGACCCATCTCAAAATCCCTGACTCTTCTTCATCATCATCTCCTCCTCCTACTGATCCAGACTTTGATTTTTCTGATGTTTTTGGTGCTCCTACCTCTCCTTCATCTTCTTCCAGTTTTCTAACTGACCCACAAATCATTCATAGTAGGTCCCACTCTTTTGTGGGTCCATCTCCAAGGATCACT</genome_strand>
        <mrna_strand>TCCATACTTTTATTTGTCTCTCTCTTTCATGCATCTGTGGGGTGCATAATCCCCTGTACCCATTACTTCTCTGCTCATAAATCACAGCTTCCTTCTTCTTTTTCTTCTTCCCCCATTCCAAACACCCTTTAAAGTTGCAACCTTTCACTTTCTTGATTTCTTCTTTTCCATTAATTAGTCCCTGCAGATCCCTGATGTAGCCCTTGTTCTTTCACAGCCTGCTCTGAGTTCAATCTCAGCTGGCTTTCTCTTGCCTAAATCACATTCTTGATTCACAAAAATAACAATAGTAAAGATGCAATCTTTGATATTTTTGCTGACCAATTGATAAAGGGGTTTCAAGAATTCTTGTTAATATGGCCTTTGCAGCTCAGCAGAAGAAGGCTATTCATTCCATGTTAGCAAACAAGCTGACCCATCTCAAAATCCCTGACTCTTCTTCATCATCATCTCCTCCTCCTACTGATCCAGACTTTGATTTTTCTGATGTTTTTGGTGCTCCTACCTCTCCTTCATCTTCTTCCAGTTTTCTAACTGACCCACANATCATTCATAGTAGGTCCCACTCTTTTGTGGGTCCATCTCCAAGGATCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E451945" ref_strand="+" ref_description="SGN-E451945 [cSTS-15-K21]">
      <seq>tctctctatactttcatttgcctgtgtctctctttcatgttcattcatgcatctgtaatttgcaaaattcactgtacccattacttctctgctgataattcacggcttccttcttcttcttcttcttcttcttcccccaagcaaacacccttcaaagttgcaacctttcaattttttgatttcttcttttccatttattagtccctgcagatccctgatgtagccctttttctttcacagcctgctctgagttcaatctcagctggcttttcttgcctaaatcacattcttgattcacaaaataacaatagtaaagatgccatctttgttatttttgctgaccaattgataaaggggtttcaagaattcttgttaatatggcctttgcagctcagcagaagaaggctattcattccatgttagcaaacaagctgacccatctcaaaatccctgactcttcttcatcatctcctccttctactgatccagactttgatttttctgatgtttttggtgctcctacctcttcttcatctcctacatcttcttccagttttctaactgacccacaaatcattcatagtaggtcccattcttttgtgggtccatctccaaggatcactctctcaaagcctctgccttttaccaagaagttgattctgagagtgaaagtgatagtgataaagttaatactcatgtangtactcaccaaactgaatgtactga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61570" stop="62862"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61888" g_stop="62562" g_length="675"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="726" r_length="683" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E451945" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>675</cumulative_length_of_scored_exons>
        <coverage percentage="0.930" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E451945" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61888" e_stop="62562"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATGCATCTGTAATTTGCAAAATCCCCTGTACCCATTACTTCTCTGCTCATAAATCACAGCTTCCTTCTTCTT-TT--TCTTCTTC--CCCCATTCCAAACACCCTTTAAAGTTGCAACCTTTCACTTTCTTGATTTCTTCTTTTCCATTAATTAGTCCCTGCAGATCCCTGATGTAGCCCTTGTTCTTTCACAGCCTGCTCTGAGTTCAATCTCAGCTGGCTTTCTCTTGCCTAAATCACATTCTTGATTCACAAAAATAACAATAGTAAAGATGCAATCTTTGATATTTTTGCTGACCAATTGATAAAGGGGTTTCAAGAATTCTTGTTAATATGGCCTTTGCAGCTCAGCAGAAGAAGGCTATTCATTCCATGTTAGCAAACAAGCTGACCCATCTCAAAATCCCTGACTCTTCTTCATCATCATCTCCTCCTCCTACTGATCCAGACTTTGATTTTTCTGATGTTTTTGGTGCTCCTA-C-C-TC-TC--CT--T-CATCTTCTTCCAGTTTTCTAACTGACCCACAAATCATTCATAGTAGGTCCCACTCTTTTGTGGGTCCATCTCCAAGGATCACTCTCTCAAAACCTCTGCCTTTTCACCAAGAAGTTGATTCTGAGGGAGAAAGTGATAGTGATAAAGTTAATACTCATGTAGGTACTCACCAAACTGAATGTTCTGA</genome_strand>
        <mrna_strand>TTCATGCATCTGTAATTTGCAAAATTCACTGTACCCATTACTTCTCTGCTGATAATTCACGGCTTCCTTCTTCTTCTTCTTCTTCTTCTTCCCCCAAGCAAACACCCTTCAAAGTTGCAACCTTTCAATTTTTTGATTTCTTCTTTTCCATTTATTAGTCCCTGCAGATCCCTGATGTAGCCCTTTTTCTTTCACAGCCTGCTCTGAGTTCAATCTCAGCTGGCTTT-TCTTGCCTAAATCACATTCTTGATTCAC-AAAATAACAATAGTAAAGATGCCATCTTTGTTATTTTTGCTGACCAATTGATAAAGGGGTTTCAAGAATTCTTGTTAATATGGCCTTTGCAGCTCAGCAGAAGAAGGCTATTCATTCCATGTTAGCAAACAAGCTGACCCATCTCAAAATCCCTGACTCTTC-T--TCATCATCTCCTCCTTCTACTGATCCAGACTTTGATTTTTCTGATGTTTTTGGTGCTCCTACCTCTTCTTCATCTCCTACATCTTCTTCCAGTTTTCTAACTGACCCACAAATCATTCATAGTAGGTCCCATTCTTTTGTGGGTCCATCTCCAAGGATCACTCTCTCAAAGCCTCTGCCTTTT-ACCAAGAAGTTGATTCTGAGAGTGAAAGTGATAGTGATAAAGTTAATACTCATGTANGTACTCACCAAACTGAATGTACTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E445675" ref_strand="+" ref_description="SGN-E445675 [cSTA-18-K23]">
      <seq>gtctctctctatactttcatttgcctctctctctctttcatgttcattcatgcatctgtaatttgcaaaattcactgtacccattacttctctgctgataaatcacggcttccttcttcttcttcttcccctaagcaaacacccttcaaagttgcaacctttcactttcttgattcttcttttccattaattagtccctgcagatccctgatgtagccctttttctttcacagcctgctctgagttcaatctcagctggcttttcttgcctaaaccacattcttgattcacaaaatagcaatagtaaagatacaatctttgttattttggctgaccaattgataaaggggtttcaagaattcttgttaatatggcctttgcagctcagcagaagaaggctattcattccatgttagcaaacaagctgacccatctcaaaatccctgactcttcttcatcatctcctccttctactgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61555" stop="62629"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61888" g_stop="62329" g_length="442"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="478" r_length="432" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E445675" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>442</cumulative_length_of_scored_exons>
        <coverage percentage="0.925" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E445675" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61888" e_stop="62329"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATGCATCTGTAATTTGCAAAATCCCCTGTACCCATTACTTCTCTGCTCATAAATCACAGCTTCCTTCTTCTTTTTCTTCTTCCCCCATTCCAAACACCCTTTAAAGTTGCAACCTTTCACTTTCTTGATTTCTTCTTTTCCATTAATTAGTCCCTGCAGATCCCTGATGTAGCCCTTGTTCTTTCACAGCCTGCTCTGAGTTCAATCTCAGCTGGCTTTCTCTTGCCTAAATCACATTCTTGATTCACAAAAATAACAATAGTAAAGATGCAATCTTTGATATTTTTGCTGACCAATTGATAAAGGGGTTTCAAGAATTCTTGTTAATATGGCCTTTGCAGCTCAGCAGAAGAAGGCTATTCATTCCATGTTAGCAAACAAGCTGACCCATCTCAAAATCCCTGACTCTTCTTCATCATCATCTCCTCCTCCTACTGAT</genome_strand>
        <mrna_strand>TTCATGCATCTGTAATTTGCAAAATTCACTGTACCCATTACTTCTCTGCTGATAAATCACGGCTTCCTTCTTC-T-T-CTTCTTCCCCTA-AGCAAACACCCTTCAAAGTTGCAACCTTTCACTTTCTTGA-TTCTTCTTTTCCATTAATTAGTCCCTGCAGATCCCTGATGTAGCCCTTTTTCTTTCACAGCCTGCTCTGAGTTCAATCTCAGCTGGCTTT-TCTTGCCTAAACCACATTCTTGATTCAC-AAAATAGCAATAGTAAAGATACAATCTTTGTTATTTTGGCTGACCAATTGATAAAGGGGTTTCAAGAATTCTTGTTAATATGGCCTTTGCAGCTCAGCAGAAGAAGGCTATTCATTCCATGTTAGCAAACAAGCTGACCCATCTCAAAATCCCTGACTCTTC-T--TCATCATCTCCTCCTTCTACTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E445670" ref_strand="+" ref_description="SGN-E445670 [cSTA-18-K11]">
      <seq>ccctaagcaaacacccttcaaagttgcaacctctcactctgttgattcttcttttccattaattaatccctgcaaatccctgatgtagccctttttctttcacagcctgctctgagttcaatctcagctggcttttcttgcctaaaccacattcttgattcacaaaatagcaatagtaaagatacaatctttgttattttggctgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61681" stop="62483"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61974" g_stop="62183" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="207" r_length="207" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E445670" ref_strand="+">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>210</cumulative_length_of_scored_exons>
        <coverage percentage="1.014" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E445670" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61974" e_stop="62183"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCATTCCAAACACCCTTTAAAGTTGCAACCTTTCACTTTCTTGATTTCTTCTTTTCCATTAATTAGTCCCTGCAGATCCCTGATGTAGCCCTTGTTCTTTCACAGCCTGCTCTGAGTTCAATCTCAGCTGGCTTTCTCTTGCCTAAATCACATTCTTGATTCACAAAAATAACAATAGTAAAGATGCAATCTTTGATATTTTTGCTGAC</genome_strand>
        <mrna_strand>CCCTAAGCAAACACCCTTCAAAGTTGCAACCTCTCACTCTGTTGA-TTCTTCTTTTCCATTAATTAATCCCTGCAAATCCCTGATGTAGCCCTTTTTCTTTCACAGCCTGCTCTGAGTTCAATCTCAGCTGGCTTT-TCTTGCCTAAACCACATTCTTGATTCAC-AAAATAGCAATAGTAAAGATACAATCTTTGTTATTTTGGCTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E557597" ref_strand="+" ref_description="SGN-E557597 [16420]">
      <seq>cttgaggatgattggaaaaggttcttttgggaaggtttttcagtgtgaagatgaaggggtatggtggtgagggtgagggtgatgggatattagcaatgaaagtgatgaggaaggacacggtaatcaagaataagcatgtggattatatgagagctgagagggatattctcactaaagttgagcacccttttattgttcagcttagatactcatttcagacgaagtctaagctgtatttgattttggattttataaatggaggacatcttttctatcatctatacagacaagggattttcagtgaggaccagctagatttatgctgctgagatagtttctgctgtttcacatcttcacaagagagggatcgtgcatcgagacctcaaacctgaaaatattctcatggatggtgatggaccatgtcatgctgacagattttggactggcaaaagagattgatgaatcaagcagatctaattcaattgtgtggaaccatgggaaatacatggctcccggagcattatacagtccaagggccacaataaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="62332" stop="65211"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62632" g_stop="62848" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="218" r_length="218" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62849" i_stop="64360" i_length="1512">
            <donor d_prob="0.992" d_score="0.96"/>
            <acceptor a_prob="0.866" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64361" g_stop="64443" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="301" r_length="83" r_score="0.964"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64444" i_stop="64528" i_length="85">
            <donor d_prob="0.966" d_score="0.98"/>
            <acceptor a_prob="0.790" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64529" g_stop="64649" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="421" r_length="120" r_score="0.942"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="64650" i_stop="64790" i_length="141">
            <donor d_prob="0.901" d_score="0.94"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="64791" g_stop="64911" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="547" r_length="126" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E557597" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E557597" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62632" e_stop="62848"/>
          <exon e_start="64361" e_stop="64443"/>
          <exon e_start="64529" e_stop="64649"/>
          <exon e_start="64791" e_stop="64911"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGAGGATGATTGGAAAAGGTTCTTTTGGGAAGGTTTTTCAG-GTGAAGATGAAGGGGTATGGTGGTGAGGGTGAGGGTGATGGAATATTAGCCATGAAAGTGATGAGGAAGGACACAGTAATCAAGAATAACCATGTGGATTATATGAGAGCTGAGAGGGATATTCTCACCAAAGTTGAGCACCCTTTTATTGTGCAGCTTAGATACTCATTTCAGGTAATAATTGCTTATACTGGACTTAATAAATTTGTCTATTCAGTTTCAGTTTAATGGATTGAAATTTGATGCATAAATAGTTTTACTATCCTGCTATTGTTACCTCTTATGCCTTCATAAATGTTGTGTTTTTTTGCTTTCTTTGAGCCGAGTGTTTATCGGAAATAGCCTCTCTACCTACACTCACCCTCCCCTGACCCCATTCATGGTACTATACTGGTTCTGTTGTTGTTGTTTGTACATAAATACAGGGATATCTTGGTGAGAATAGTGCGTCCACATTAAGGGACTTGGCTAAGTGTTATTCCAGTTATCAATCTGAACTGATGTTACTTGTTTTTCTTTTTCATGTACAAGAACAAGATAATCTTTTGTATTAGGAATTATTTGGTTTCAAGTCAGAAACTAAATTTAGTACTATGGTTATTCGTCCTTTCATTTAATTTTCTGTTACAGAAGTACTTAACAGATGAGGCTTTTCCTTGCCTCTCTCTGTGGGGAAAAGCTTTTCATCAAAAGAGGAAACTCTTTTGGGAATCTGGTTGAATTCTGGTGTCACTCATTCCTTCTTTTTTGAGCTGGGACAACATGAGCAAGTTTTGAACTTTATTAGTACTAGGAGTACTATTTAGCATCATTAATGCTAATGAAATTAATTTCAAGTGGAACTTCTGTTTTTGTCTAGAATCTAGTCAGATTGTTGATATTTGATTGGATCTTTTAGTAGATTTATTTAGACGATATCAGAGAACCTCATTAACTTTTTCTGTCGCGATTTTCTTTTTTTAGTTCCCATTATTATTTGCCTTTGATGCAGAATTGTCTTTGTTTCGGGAATGATCTTTGTGAAGGTTTTTTTGGACAATTTTTCTTTTGAACGGTTTAACTTTTGTATTATAGACCAGTACTTAGGTCGTACTGGAGAACCCATTTACAAATGAAATTATGAGAACAAAGAAGCTAAGAAAATTCAATCCTAACATGAGTCTAAAACTTTTAAGATTGATCTGCATCTACGGGAGCTCTTTGTTCTTCAATAGGAAATAGCAAAACATTGTTTCTATAAAATGCTACTTCTGGCCTCAAAATGTTTGGAATTCCTTTCTTTCCAGATAGCCCACCAATGCAAGCTGGAATGATCCTACAGTAGCTTCTATTTGTTACCCCAATCCCAGCCTCCTCCCAGCTAGAAAGAGTGTCAACAATCTTCCTGGGCATTGTCCAAGATGAATTTTTTTTTTTTTTTGGGCAATTTCAAAGTGAAGTTAATGATTTTGTAGAACTTTTGTTGGTTTTTTCTGTTTAGTTCCCATATTTCTCGATGTCTTTTTTAAGCACGGATTTTGTCTTTCTTTGGTGTACTCATTGTCATTGATTTTGCTACTGTGATTTGATTTTCGAAATCATTGAACTGATGCCTTACAGTCTCAGACCAAGCTTTTTTGCCCTTTGATGTGTTTGTTCTTATTAACAATATCAGTCCTTGATCATTTATTTTGGAATATGCTGCAGACGAAGTCTAAGCTTTACTTGATTTTGGATTTTATAAATGGAGGACATCTTTTCTATCATTTATACAGACAAGGGATTTTCAGGTACCTTTGGTATTTTTTATTGTCTAACCAGTCATAATATGCATTCTGTTCTTCTAACTTCAGCTCTTGGGTGTGCTTTGGGTAGTGAGGACCAGGCAAGGATTTATGCTGCTGAGATAGTTTCTGCTGTTTCACATCTTCACCAGAGAGGGATCGTGCATCGAGACCTCAAACCAGAAAATATTCTCATGGATGGTGATGGA-CATGTAATAGTCTTGCTGTACTCTACTGCAGGAACATGATTGATCCATGGAAGAAGAAACGAAATAAGAAATATGTAGCATTTTTCCTTTGAACATTGCAGTTGATTCATTCCTCTTCTTAAGCATATCATTTTCTCTACCCAGGTCATGCTGACAGATTTTGGACTGGCAAAAGAGATTGATGAATCAAGCAGATCTAATTCAA-TGTGTGGAACCAT-GG-AATACATGGCT-CCGGAG-ATTATACAGTCCAAGGGCCACAATAAAG</genome_strand>
        <mrna_strand>CTTGAGGATGATTGGAAAAGGTTCTTTTGGGAAGGTTTTTCAGTGTGAAGATGAAGGGGTATGGTGGTGAGGGTGAGGGTGATGGGATATTAGCAATGAAAGTGATGAGGAAGGACACGGTAATCAAGAATAAGCATGTGGATTATATGAGAGCTGAGAGGGATATTCTCACTAAAGTTGAGCACCCTTTTATTGTTCAGCTTAGATACTCATTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAGTCTAAGCTGTATTTGATTTTGGATTTTATAAATGGAGGACATCTTTTCTATCATCTATACAGACAAGGGATTTTCAG.....................................................................................TGAGGACCA-GCTA-GATTTATGCTGCTGAGATAGTTTCTGCTGTTTCACATCTTCACAAGAGAGGGATCGTGCATCGAGACCTCAAACCTGAAAATATTCTCATGGATGGTGATGGACCAT.............................................................................................................................................GTCATGCTGACAGATTTTGGACTGGCAAAAGAGATTGATGAATCAAGCAGATCTAATTCAATTGTGTGGAACCATGGGAAATACATGGCTCCCGGAGCATTATACAGTCCAAGGGCCACAATAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E224449" ref_strand="-" ref_description="SGN-E224449 [cLEL-27-D14](-)">
      <seq>cttttgggaaggtttttcaggtgaagatgaaggggtatggtggtgagggtgagggtgatggaatattagccatgaaagtgatgaggaaggacacagtaatcaagaataaccatgtggattatatgagagctgagagggatattctcaccaaagttgagcacccttttattgtgcagcttagatactcatttcagacgaagtctaagctttacttgattttggattttataaatggaggacatcttttctatcatttatacagacaagggattttcagtgaggaccaggcaaggatttatgctgctgagatagtttctgctgtttcacatcttcaccagagagggatcgtgcatcgagacctcaaaccagaaaatattctcatggatggtgatggacatgtcatgctgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="62355" stop="64959"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62655" g_stop="62848" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="194" r_length="194" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62849" i_stop="64360" i_length="1512">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.866" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64361" g_stop="64443" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="277" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64444" i_stop="64528" i_length="85">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.790" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64529" g_stop="64649" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="398" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="64650" i_stop="64790" i_length="141">
            <donor d_prob="0.901" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="64791" g_stop="64801" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="399" r_stop="409" r_length="11" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E224449" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>409</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E224449" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="62655" e_stop="62848"/>
          <exon e_start="64361" e_stop="64443"/>
          <exon e_start="64529" e_stop="64649"/>
          <exon e_start="64791" e_stop="64801"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTGGGAAGGTTTTTCAGGTGAAGATGAAGGGGTATGGTGGTGAGGGTGAGGGTGATGGAATATTAGCCATGAAAGTGATGAGGAAGGACACAGTAATCAAGAATAACCATGTGGATTATATGAGAGCTGAGAGGGATATTCTCACCAAAGTTGAGCACCCTTTTATTGTGCAGCTTAGATACTCATTTCAGGTAATAATTGCTTATACTGGACTTAATAAATTTGTCTATTCAGTTTCAGTTTAATGGATTGAAATTTGATGCATAAATAGTTTTACTATCCTGCTATTGTTACCTCTTATGCCTTCATAAATGTTGTGTTTTTTTGCTTTCTTTGAGCCGAGTGTTTATCGGAAATAGCCTCTCTACCTACACTCACCCTCCCCTGACCCCATTCATGGTACTATACTGGTTCTGTTGTTGTTGTTTGTACATAAATACAGGGATATCTTGGTGAGAATAGTGCGTCCACATTAAGGGACTTGGCTAAGTGTTATTCCAGTTATCAATCTGAACTGATGTTACTTGTTTTTCTTTTTCATGTACAAGAACAAGATAATCTTTTGTATTAGGAATTATTTGGTTTCAAGTCAGAAACTAAATTTAGTACTATGGTTATTCGTCCTTTCATTTAATTTTCTGTTACAGAAGTACTTAACAGATGAGGCTTTTCCTTGCCTCTCTCTGTGGGGAAAAGCTTTTCATCAAAAGAGGAAACTCTTTTGGGAATCTGGTTGAATTCTGGTGTCACTCATTCCTTCTTTTTTGAGCTGGGACAACATGAGCAAGTTTTGAACTTTATTAGTACTAGGAGTACTATTTAGCATCATTAATGCTAATGAAATTAATTTCAAGTGGAACTTCTGTTTTTGTCTAGAATCTAGTCAGATTGTTGATATTTGATTGGATCTTTTAGTAGATTTATTTAGACGATATCAGAGAACCTCATTAACTTTTTCTGTCGCGATTTTCTTTTTTTAGTTCCCATTATTATTTGCCTTTGATGCAGAATTGTCTTTGTTTCGGGAATGATCTTTGTGAAGGTTTTTTTGGACAATTTTTCTTTTGAACGGTTTAACTTTTGTATTATAGACCAGTACTTAGGTCGTACTGGAGAACCCATTTACAAATGAAATTATGAGAACAAAGAAGCTAAGAAAATTCAATCCTAACATGAGTCTAAAACTTTTAAGATTGATCTGCATCTACGGGAGCTCTTTGTTCTTCAATAGGAAATAGCAAAACATTGTTTCTATAAAATGCTACTTCTGGCCTCAAAATGTTTGGAATTCCTTTCTTTCCAGATAGCCCACCAATGCAAGCTGGAATGATCCTACAGTAGCTTCTATTTGTTACCCCAATCCCAGCCTCCTCCCAGCTAGAAAGAGTGTCAACAATCTTCCTGGGCATTGTCCAAGATGAATTTTTTTTTTTTTTTGGGCAATTTCAAAGTGAAGTTAATGATTTTGTAGAACTTTTGTTGGTTTTTTCTGTTTAGTTCCCATATTTCTCGATGTCTTTTTTAAGCACGGATTTTGTCTTTCTTTGGTGTACTCATTGTCATTGATTTTGCTACTGTGATTTGATTTTCGAAATCATTGAACTGATGCCTTACAGTCTCAGACCAAGCTTTTTTGCCCTTTGATGTGTTTGTTCTTATTAACAATATCAGTCCTTGATCATTTATTTTGGAATATGCTGCAGACGAAGTCTAAGCTTTACTTGATTTTGGATTTTATAAATGGAGGACATCTTTTCTATCATTTATACAGACAAGGGATTTTCAGGTACCTTTGGTATTTTTTATTGTCTAACCAGTCATAATATGCATTCTGTTCTTCTAACTTCAGCTCTTGGGTGTGCTTTGGGTAGTGAGGACCAGGCAAGGATTTATGCTGCTGAGATAGTTTCTGCTGTTTCACATCTTCACCAGAGAGGGATCGTGCATCGAGACCTCAAACCAGAAAATATTCTCATGGATGGTGATGGACATGTAATAGTCTTGCTGTACTCTACTGCAGGAACATGATTGATCCATGGAAGAAGAAACGAAATAAGAAATATGTAGCATTTTTCCTTTGAACATTGCAGTTGATTCATTCCTCTTCTTAAGCATATCATTTTCTCTACCCAGGTCATGCTGAC</genome_strand>
        <mrna_strand>CTTTTGGGAAGGTTTTTCAGGTGAAGATGAAGGGGTATGGTGGTGAGGGTGAGGGTGATGGAATATTAGCCATGAAAGTGATGAGGAAGGACACAGTAATCAAGAATAACCATGTGGATTATATGAGAGCTGAGAGGGATATTCTCACCAAAGTTGAGCACCCTTTTATTGTGCAGCTTAGATACTCATTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAGTCTAAGCTTTACTTGATTTTGGATTTTATAAATGGAGGACATCTTTTCTATCATTTATACAGACAAGGGATTTTCAG.....................................................................................TGAGGACCAGGCAAGGATTTATGCTGCTGAGATAGTTTCTGCTGTTTCACATCTTCACCAGAGAGGGATCGTGCATCGAGACCTCAAACCAGAAAATATTCTCATGGATGGTGATGGACAT.............................................................................................................................................GTCATGCTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E221365" ref_strand="+" ref_description="SGN-E221365 [cLEL-22-H8](-)">
      <seq>gatcaaaagtcacaagtggttccgcacaatcaactggaaaaaacttgatgccagagaactacagcctaagttcaaaccagatgtaattggcagagattgcacagccaatttcgataaatgttggactacgatgccaccggatgactcaccagcatctactccgacaacaggcgaacactttcaaggttacacttatgtagcaccaaatccttggctctcctctagttgatttaagtctttatcctgacaaaattccgaacttttagtttgctattgtaagtcattcttttttagagagaggatcatgagaagtgtatggatcagattgtatcatgataaaagcaaatctttctaactctttttgtgtactattgtaagctcaattcttctttaaaaaaaaaaaaaaaaaaaaactcgagactagttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65138" stop="66130"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65438" g_stop="65829" g_length="392"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="392" r_length="392" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="393" polyA_stop="414"/>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E221365" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>392</cumulative_length_of_scored_exons>
        <coverage percentage="0.916" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E221365" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65438" e_stop="65829"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCAAAAGTCACAAGTGGTTCCGCACAATCAACTGGAAGAAACTTGATGCCAGAGAACTACAGCCTAAGTTCAAACCAGATGTAATTGGCAGAGATTGCACAGCCAATTTCGATAAATGTTGGACTACGATGCCACCGGATGACTCACCAGCATCTACTCCGACAACAGGCGAACACTTTCAAGGTTACACTTATGTAGCACCAAATCCTTGGCTCTCCTCTAGTTGATTTAAGTCTTTATCCTGACAAAATTCCGAACTTTTAGTTTGCTATTGTAAGTCATTCTTTTTTAGAGAGAGGATCATGAGAAGTGTATGGATCAGATTGTATCATGATAAAAGCAAATCTTTCTAACTCTTTTTGTGTACTATTGTAAGCTCAATTCTTCTTT</genome_strand>
        <mrna_strand>GATCAAAAGTCACAAGTGGTTCCGCACAATCAACTGGAAAAAACTTGATGCCAGAGAACTACAGCCTAAGTTCAAACCAGATGTAATTGGCAGAGATTGCACAGCCAATTTCGATAAATGTTGGACTACGATGCCACCGGATGACTCACCAGCATCTACTCCGACAACAGGCGAACACTTTCAAGGTTACACTTATGTAGCACCAAATCCTTGGCTCTCCTCTAGTTGATTTAAGTCTTTATCCTGACAAAATTCCGAACTTTTAGTTTGCTATTGTAAGTCATTCTTTTTTAGAGAGAGGATCATGAGAAGTGTATGGATCAGATTGTATCATGATAAAAGCAAATCTTTCTAACTCTTTTTGTGTACTATTGTAAGCTCAATTCTTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E220988" ref_strand="+" ref_description="SGN-E220988 [cLEL-22-H20](-)">
      <seq>aagttcaaaccagatgtaattggcagagattgcacagccaatttcgataaatgttggactacgatgccaccggatgactcaccagcatctactccgacaacaggcgaacactttcaaggttacacttatgtagcaccaaatccttggctctcctctagttgatttaagtctttatcctgacaaaattccgaacttttagtttgctattgtaagtcattcttttttagagagaggatcatgagaagtgtatggatcagattgtatcatgataaaagcaaatctttctaactctttttgtgtactattgtaagctcaattcttctttaaaaaaaaaaaaaaaaaaaaactcgagactagttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="65205" stop="66130"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65505" g_stop="65829" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="325" r_length="325" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="326" polyA_stop="347"/>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E220988" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>325</cumulative_length_of_scored_exons>
        <coverage percentage="0.900" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E220988" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65505" e_stop="65829"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTTCAAACCAGATGTAATTGGCAGAGATTGCACAGCCAATTTCGATAAATGTTGGACTACGATGCCACCGGATGACTCACCAGCATCTACTCCGACAACAGGCGAACACTTTCAAGGTTACACTTATGTAGCACCAAATCCTTGGCTCTCCTCTAGTTGATTTAAGTCTTTATCCTGACAAAATTCCGAACTTTTAGTTTGCTATTGTAAGTCATTCTTTTTTAGAGAGAGGATCATGAGAAGTGTATGGATCAGATTGTATCATGATAAAAGCAAATCTTTCTAACTCTTTTTGTGTACTATTGTAAGCTCAATTCTTCTTT</genome_strand>
        <mrna_strand>AAGTTCAAACCAGATGTAATTGGCAGAGATTGCACAGCCAATTTCGATAAATGTTGGACTACGATGCCACCGGATGACTCACCAGCATCTACTCCGACAACAGGCGAACACTTTCAAGGTTACACTTATGTAGCACCAAATCCTTGGCTCTCCTCTAGTTGATTTAAGTCTTTATCCTGACAAAATTCCGAACTTTTAGTTTGCTATTGTAAGTCATTCTTTTTTAGAGAGAGGATCATGAGAAGTGTATGGATCAGATTGTATCATGATAAAAGCAAATCTTTCTAACTCTTTTTGTGTACTATTGTAAGCTCAATTCTTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E308760" ref_strand="+" ref_description="SGN-E308760 [cLEZ-11-I10]">
      <seq>gtttttacaacccatacactaagattcaagaaaatcataattgctgcctaacacatgcacccaatcaggatttggataatgttatcacatggtcagctcatacaaccacccacatacatatctataggaccactcttcatcaaagatggtatcttcattgtgtttttccatggaaaactactttagtagtagggattttgatgttataaataagagtagcattaaataggtaccacaaagcatgacatatttctggtctgtacaaatcaggaccaaaagtctagtcaattaatcacatatggatatctccttacataaacttttcctcaatatataagattaatataattatgaacccagcttactcactctttgtcctagttttttcttcttcttatttttctttctccaaagatcctttgatctctctcatgccacacggatgatgctttctccattactgaaacttgacatcacattatatgccgagtgtctagtagatgatgcttgtccctgatcaagtgacaatgataatctcagtgacaacgacgatggctcgattgttgaattgtggttggcgttaaggtcgatcgattttgatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="69215" stop="70418"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69515" g_stop="70118" g_length="604"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="604" r_length="604" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E308760" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E308760" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69515" e_stop="70118"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCTTACAACCCATACACTAGGATTCAAGAAAATCATAATTGCTGCCTAACACATGCACCCAATCAGGATTTGGATAATGTTATCACATGGTCAGCTCATACAACCACCCACATACATATCTATAGGACCACTCTTCATCAAAGATGGTATCTTCATTGTGTTTTTCCATGGAAAACTACTTTAGTAGTAGGGATTTTGATGTTATAAATAAGAGTAGCATTAAATAGGTACCACAAAGCATGACATATTTCTGGTCTGTACAAATCAGGACCAAAAGTCTAGTCAATTAATCACATATGGATATCTCCTTACATAAACTTTTCCTCAATATATAAGATTAATATAATTATGAACCCAGCTTACTCACTCTTTGTCCTAGTTTTTTCTTCTTCTTTTTTTTCTTTCTCCAGAGATCCTTTGATCTCTCTCATGCCACACGGATGATGCTTTCTCCATTACTGAAACTTGACATCACATTATATGCCGAGTGTCTAGTAGATGATGCTTGTCCCTGATCAAGTGACAATGATAATCTCAGTGACAACGACGATGGCTCGATTGTTGAATTGTGGTTGGCGTTAAGGTCGATCGATTTTGATGGA</genome_strand>
        <mrna_strand>GTTTTTACAACCCATACACTAAGATTCAAGAAAATCATAATTGCTGCCTAACACATGCACCCAATCAGGATTTGGATAATGTTATCACATGGTCAGCTCATACAACCACCCACATACATATCTATAGGACCACTCTTCATCAAAGATGGTATCTTCATTGTGTTTTTCCATGGAAAACTACTTTAGTAGTAGGGATTTTGATGTTATAAATAAGAGTAGCATTAAATAGGTACCACAAAGCATGACATATTTCTGGTCTGTACAAATCAGGACCAAAAGTCTAGTCAATTAATCACATATGGATATCTCCTTACATAAACTTTTCCTCAATATATAAGATTAATATAATTATGAACCCAGCTTACTCACTCTTTGTCCTAGTTTTTTCTTCTTCTTATTTTTCTTTCTCCAAAGATCCTTTGATCTCTCTCATGCCACACGGATGATGCTTTCTCCATTACTGAAACTTGACATCACATTATATGCCGAGTGTCTAGTAGATGATGCTTGTCCCTGATCAAGTGACAATGATAATCTCAGTGACAACGACGATGGCTCGATTGTTGAATTGTGGTTGGCGTTAAGGTCGATCGATTTTGATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E556560" ref_strand="+" ref_description="SGN-E556560 [cTSD-3-N7]">
      <seq>ggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttccagcaccagcaacattacctcctgtagaaactaccaaaaccaatgcattttcggtggcaccggctgttgctcctatcatatttccagtacaggttaataagtcaagagagaatccaactctgtttcgacatgatcatgcgaattcatcgatgctagttggtcctgttcctatgttttcaatgcctaatccatcaaaatcgatcgaccttaacgccaaccacaattcaacaatcgagccatcgtcgttgtcactgagattatcattgtcacttgatcagggacaagcatcatctactagacactcggcatataatgtgatgtcaagtttcagtaatggagaaagcatcatccgtgtggcatgagagagatcaaaggatctctggagaaagaaaaaaaagaagaagaaaaaactaggacaaagagtgagtaagctgggttcataattatattaatcttatatattgaggaaaagtttatgtaaggagatatccatatgtgattaattgactagacttttggtcctgatttgtacagaccagaaatatgtcatgctttgtggtacctatttaatgctactcttatttataacatcaaaatccctactactaaagtagttttccatggaaaaaaaaaaaaaaaaaanaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70658" stop="69364"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70358" g_stop="69673" g_length="686"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="686" r_length="686" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="687" polyA_stop="708"/>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E556560" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>686</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E556560" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70358" e_stop="69673"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAAAGAAGAAGAAAAAACTAGGACAAAGAGTGAGTAAGCTGGGTTCATAATTATATTAATCTTATATATTGAGGAAAAGTTTATGTAAGGAGATATCCATATGTGATTAATTGACTAGACTTTTGGTCCTGATTTGTACAGACCAGAAATATGTCATGCTTTGTGGTACCTATTTAATGCTACTCTTATTTATAACATCAAAATCCCTACTACTAAAGTAGTTTTCCATGGAAAAACACA</genome_strand>
        <mrna_strand>GGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAAAGAAGAAGAAAAAACTAGGACAAAGAGTGAGTAAGCTGGGTTCATAATTATATTAATCTTATATATTGAGGAAAAGTTTATGTAAGGAGATATCCATATGTGATTAATTGACTAGACTTTTGGTCCTGATTTGTACAGACCAGAAATATGTCATGCTTTGTGGTACCTATTTAATGCTACTCTTATTTATAACATCAAAATCCCTACTACTAAAGTAGTTTTCCATGGAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E551701" ref_strand="+" ref_description="SGN-E551701 [cTSB-1-J10]">
      <seq>atctctcgtaacttcgtaaagactcgcacaccgacacaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttccagcaccagcaacattacctcctgtagaaactaccaaaaccaatgcattttcggtggcaccggctgttgctcctatcatatttccagtacaggttaataagtcaagagagaatccaactctgtttcgacatgatcatgcgaattcatcgatgctagttggtcctgttcctatgttttcaatgcctaatccatcaaaatcgatcgaccttaacgccaaccacaattcaacaatcgagccatcgtcgttgtcactgagattatcattgtcacttgatcagggacaagcatcatctactagacactcggcatataatgtgatgtcaagtttcagtaatggagaaagcatcatccgtgtggcatgagagagatcaaaggatctctggagaaagaaaaaaaagaagaagaaaaaactaggacaaagagtgagtaagctgggttcataattatattaatcttatatattgaggaaaagtttatgtaaggagatatccatatgtgattaattgactagacttttggtcctgatttgtacagaccagaaatatgtcatgctttgtggtacctatttaatgctactcttatttataacatcaaaatccctactactaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71253" stop="69396"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70953" g_stop="70822" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="132" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70357" g_stop="69696" g_length="662"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="794" r_length="662" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E551701" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>794</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E551701" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70953" e_stop="70822"/>
          <exon e_start="70357" e_stop="69696"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAAAGAAGAAGAAAAAACTAGGACAAAGAGTGAGTAAGCTGGGTTCATAATTATATTAATCTTATATATTGAGGAAAAGTTTATGTAAGGAGATATCCATATGTGATTAATTGACTAGACTTTTGGTCCTGATTTGTACAGACCAGAAATATGTCATGCTTTGTGGTACCTATTTAATGCTACTCTTATTTATAACATCAAAATCCCTACTACTAAA</genome_strand>
        <mrna_strand>ATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAAAGAAGAAGAAAAAACTAGGACAAAGAGTGAGTAAGCTGGGTTCATAATTATATTAATCTTATATATTGAGGAAAAGTTTATGTAAGGAGATATCCATATGTGATTAATTGACTAGACTTTTGGTCCTGATTTGTACAGACCAGAAATATGTCATGCTTTGTGGTACCTATTTAATGCTACTCTTATTTATAACATCAAAATCCCTACTACTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E575058" ref_strand="+" ref_description="SGN-E575058 [34622]">
      <seq>ctttgtcactgagattatcattgtcacttgatcatgtacaagcatcatctactagacactcggcatataacgtgatgtcaagtttcagtaatggagaaagcatcatccgtgtggcatgagatcaaaggatctcttgagaaaaaaagaagaagaaaaaactaggacaagagtgagtaagctgggttcataattatattaatcttatatattgaggaaaagtttatgatatccatgtggtgattaaatgactacacttttggtcctgatttgtacagaccagaaatatgtcatgctttgtggtacctatttaatgctactcttatttataacatcaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70362" stop="69410"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70062" g_stop="69705" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="342" r_length="342" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E575058" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>358</cumulative_length_of_scored_exons>
        <coverage percentage="1.047" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E575058" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70062" e_stop="69705"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAAAGAAGAAGAAAAAACTAGGACAAAGAGTGAGTAAGCTGGGTTCATAATTATATTAATCTTATATATTGAGGAAAAGTTTATGTAAGGAGATATCCATAT-GTGATTAATTGACTAGACTTTTGGTCCTGATTTGTACAGACCAGAAATATGTCATGCTTTGTGGTACCTATTTAATGCTACTCTTATTTATAACATCAAAATCCCT</genome_strand>
        <mrna_strand>CTTTGTCACTGAGATTATCATTGTCACTTGATCATGTACAAGCATCATCTACTAGACACTCGGCATATAACGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCAT----GAGATCAAAGGATCTCT--TG--AG-AAAAAAAGAAGAAGAAAAAACTAGGAC-AAGAGTGAGTAAGCTGGGTTCATAATTATATTAATCTTATATATTGAGGAAAAGTTTA--T-----GATATCCATGTGGTGATTAAATGACTACACTTTTGGTCCTGATTTGTACAGACCAGAAATATGTCATGCTTTGTGGTACCTATTTAATGCTACTCTTATTTATAACATCAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E241791" ref_strand="+" ref_description="SGN-E241791 [cLEE-10-M23]">
      <seq>gagaatccatctctgtttcgacatgatcatgcgaattcatcgatgctagttggtcctgttcctatgttttcaatgcctaatccatcaaaatcgatcgaccttaacgccaaccacaattcaacaatcgagccatcgtcgttgtcactgagattatcattgtcacttgatcagggacaagcatcatctactagacactcggcatataatgtgatgtcaagtttcagtaatggagaaagcatcatccgtgtggcatgagagagatcaaaggatctctggagaaagaaaaaaaagaagaagaaaaaactaggacaaagagtgagtaagctgggttcataattatattaatcttatatattgaggaaaagtttatgtaaggagatatccatatgtgattaattgactagacttttggtcctgatttgtacagaccagaaatatgtcatgctttgtggtacctatttaatgctactcttatttataacatcaaanaataaaataaaaaaaaaaataaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70498" stop="69411"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70198" g_stop="69711" g_length="488"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="488" r_length="488" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="498" polyA_stop="515"/>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E241791" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E241791" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70198" e_stop="69711"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAAAGAAGAAGAAAAAACTAGGACAAAGAGTGAGTAAGCTGGGTTCATAATTATATTAATCTTATATATTGAGGAAAAGTTTATGTAAGGAGATATCCATATGTGATTAATTGACTAGACTTTTGGTCCTGATTTGTACAGACCAGAAATATGTCATGCTTTGTGGTACCTATTTAATGCTACTCTTATTTATAACATCAAA</genome_strand>
        <mrna_strand>GAGAATCCATCTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAAAGAAGAAGAAAAAACTAGGACAAAGAGTGAGTAAGCTGGGTTCATAATTATATTAATCTTATATATTGAGGAAAAGTTTATGTAAGGAGATATCCATATGTGATTAATTGACTAGACTTTTGGTCCTGATTTGTACAGACCAGAAATATGTCATGCTTTGTGGTACCTATTTAATGCTACTCTTATTTATAACATCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E589486" ref_strand="-" ref_description="SGN-E589486 [43062]">
      <seq>aaagagcataagttatccttttcggattgcagaaaatggggaaaaggagactggagaggaatctctcgtaacttcgttaagactcgcacaccgactcaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggaaaataaacaagaaatcccagttctagcaccagcaacattaccaactaccaaaaccaatgcatttccgggggcaccagctgttggtcctatcatatttccagtacaaattgacaagtcaagagagaatccaactctgttgcgacatgatcatgggaattcaccgatgctagttggtcctgttcctatgttttcaatgcctaatccatcaacagcaattgaccttaacgccaaccacaactcaacaattgagccatcgtctttgtcactgagattatcattgtcacttgatcagggacaagcatcatctactagacactcggcatataacgtgatgccaagtttcagtaatggagaaagcatcatccgtgtggcatgagatcaaaggatctcttgagaaaaaaagaagatgaaaatactaggacaagagtgagtaagctcggttcataattatattaatcttatatattgaggaaaagtttatgatatccatgtgatgtgattagttgactagacttttggtcctgatttgtacagaccagaaatatgtcatgctttgtggtgtacctatttaatgctaagggaaagtagttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71274" stop="69431"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71013" g_stop="70822" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="192" r_length="192" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70357" g_stop="69748" g_length="610"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="779" r_length="587" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E589486" ref_strand="-">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>802</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E589486" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="71013" e_stop="70822"/>
          <exon e_start="70357" e_stop="69748"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAGCATAAGTTATTCCTTTTAGGATTGCA-AAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAAAGAAGAAGAAAAAACTAGGACAAAGAGTGAGTAAGCTGGGTTCATAATTATATTAATCTTATATATTGAGGAAAAGTTTATGTAAGGAGATATCCATATGTGATTAATTGACTAGACTTTTGGTCCTGATTTGTACAGACCAGAAATATGTCATGCTTTGTG</genome_strand>
        <mrna_strand>AAAGAGCATAAGTTA-TCCTTTTCGGATTGCAGAAAATGGGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTTAAGACTCGCACACCGACTCAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAACAAGAAATCCCAGTTCTAGCACCAGCAACATTA---CC------AACTACCAAAACCAATGCATTTCCGGGGGCACCAGCTGTTGGTCCTATCATATTTCCAGTACAAATTGACAAGTCAAGAGAGAATCCAACTCTGTTGCGACATGATCATGGGAATTCACCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAACAGCAATTGACCTTAACGCCAACCACAACTCAACAATTGAGCCATCGTCTTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAACGTGATGCCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCAT----GAGATCAAAGGATCTCT--TG--AG-AAAAAAAGAAGATGAAAATACTAGGAC-AAGAGTGAGTAAGCTCGGTTCATAATTATATTAATCTTATATATTGAGGAAAAGTTTATG--A-TATCCAT-GTGATGTGATTAGTTGACTAGACTTTTGGTCCTGATTTGTACAGACCAGAAATATGTCATGCTTTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E591495" ref_strand="-" ref_description="SGN-E591495 [45208]">
      <seq>tcaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggaaaataaacaagaaatcccagttctagcaccagcaacattaccaactacccaaaccaatgcatttccgggggcaccagctgttggtcctatcatatttccagtacaaattgacaagtcaagagagaatccaactctgttgcgacatgatcatgggaattcaccgatgctagttggtcctgttcctatgttttcaatgcctaatccatcaacagcaattgaccttaacgccaaccacaactcaacaattgagccatcgtctttgtcactgagattatcattgtcacttgatcagggacaagcatcatctactagacactcggcatataacgtgatgccaagtttcagtaatggagaaagcatcatccgtgtggcatgagatcaaaggatctcttgagaaaaaaagaagatgaaaatactaggacaagagtgagtaagctcggttcataattatattaatcttatatattgaggaaaagtttatgatatccatgtgatgtgattagttgactagacttttggtcctgatttgtacagaccagaaatatgtcatgctttgtggtgtacctatttaatgctaagggaaagtagttttccattgaaaatcacaatgaagatatcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71217" stop="69431"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70918" g_stop="70822" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="97" r_length="97" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70357" g_stop="69748" g_length="610"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="684" r_length="587" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E591495" ref_strand="-">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>707</cumulative_length_of_scored_exons>
        <coverage percentage="0.946" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E591495" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="70918" e_stop="70822"/>
          <exon e_start="70357" e_stop="69748"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAAAGAAGAAGAAAAAACTAGGACAAAGAGTGAGTAAGCTGGGTTCATAATTATATTAATCTTATATATTGAGGAAAAGTTTATGTAAGGAGATATCCATATGTGATTAATTGACTAGACTTTTGGTCCTGATTTGTACAGACCAGAAATATGTCATGCTTTGTG</genome_strand>
        <mrna_strand>TCAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAACAAGAAATCCCAGTTCTAGCACCAGCAACATTA---CC------AACTACCCAAACCAATGCATTTCCGGGGGCACCAGCTGTTGGTCCTATCATATTTCCAGTACAAATTGACAAGTCAAGAGAGAATCCAACTCTGTTGCGACATGATCATGGGAATTCACCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAACAGCAATTGACCTTAACGCCAACCACAACTCAACAATTGAGCCATCGTCTTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAACGTGATGCCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCAT----GAGATCAAAGGATCTCT--TG--AG-AAAAAAAGAAGATGAAAATACTAGGAC-AAGAGTGAGTAAGCTCGGTTCATAATTATATTAATCTTATATATTGAGGAAAAGTTTATG--A-TATCCAT-GTGATGTGATTAGTTGACTAGACTTTTGGTCCTGATTTGTACAGACCAGAAATATGTCATGCTTTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E432323" ref_strand="-" ref_description="SGN-E432323 [STM-56-J24]">
      <seq>gtatcagtaatgccaatagaagaggtggaaaataaacaagaaatcccagttctagcaccagcaacattaccaactaccaaaaccaatgcatttccgggggcaccagctgttggtcctatcatatttccagtacaaattgacaagtcaagagagaatccaactctgttgcgacatgatcatgggaattcaccgatgctagttggtcctgttcctatgttttcaatgcctaatccatcaacagcaattgaccttaacgccaaccacaactcaacaattgagccatcgtctttgtcactgagattatcattgtcacttgatcagggacaagcatcatctactagacactcggcatataacgtgatgccaagtttcagtaatggagaaagcatcatccgtgtggcatgagatcaaaggatctcttgagaaaaaaagaagatgaaaatactaggacaagagtgagtaagctcggttcataattatattaatcttatatattgaggaaaagtttatgatatccatgtgatgtgattagttgactagacttttggtcctgatttgtacagaccagaaatatgtcatgctttgtggtgtacctatttaatgctaagggaaagtagttttccattgaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70657" stop="69431"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70357" g_stop="69748" g_length="610"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="587" r_length="587" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="628" polyA_stop="647"/>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E432323" ref_strand="-">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E432323" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="70357" e_stop="69748"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAAAGAAGAAGAAAAAACTAGGACAAAGAGTGAGTAAGCTGGGTTCATAATTATATTAATCTTATATATTGAGGAAAAGTTTATGTAAGGAGATATCCATATGTGATTAATTGACTAGACTTTTGGTCCTGATTTGTACAGACCAGAAATATGTCATGCTTTGTG</genome_strand>
        <mrna_strand>GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAACAAGAAATCCCAGTTCTAGCACCAGCAACATTA---CC------AACTACCAAAACCAATGCATTTCCGGGGGCACCAGCTGTTGGTCCTATCATATTTCCAGTACAAATTGACAAGTCAAGAGAGAATCCAACTCTGTTGCGACATGATCATGGGAATTCACCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAACAGCAATTGACCTTAACGCCAACCACAACTCAACAATTGAGCCATCGTCTTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAACGTGATGCCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCAT----GAGATCAAAGGATCTCT--TG--AG-AAAAAAAGAAGATGAAAATACTAGGAC-AAGAGTGAGTAAGCTCGGTTCATAATTATATTAATCTTATATATTGAGGAAAAGTTTATG--A-TATCCAT-GTGATGTGATTAGTTGACTAGACTTTTGGTCCTGATTTGTACAGACCAGAAATATGTCATGCTTTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E368401" ref_strand="+" ref_description="SGN-E368401 [TUS-23-N23](-)">
      <seq>agtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttccagcaccagcaacattacctcctgtagaaactaccaaaaccaatgcattttcggtggcaccggctgttgctcctatcatatttccagtacaggttaataagtcaagagagaatccaactctgtttcgacatgatcatgcgaattcatcgatgctagttggtcctgttcctatgttttcaatgcctaatccatcaaaatcgatcgaccttaacgccaaccacaattcaacaatcgagccatcgtcgttgtcactgagattatcattgtcacttgatcagggacaagcatcatctactagacactcggcatataatgtgatgtcaagtttcagtaatggagaaagcatcatccgtgtggcatgagagagatcaaaggatctctggagaaagaaaaaaaagaagaagaaaaaactaggacaaagagtgagtaagctgggttcataattatattaatcttatatattgaggaaaagtttatgtaaggagatatccatatgtgattaattgactagacttttggtcctgatttgtacagaccagaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71208" stop="69462"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70908" g_stop="70822" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="87" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70357" g_stop="69756" g_length="602"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="689" r_length="602" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E368401" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>689</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E368401" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70908" e_stop="70822"/>
          <exon e_start="70357" e_stop="69756"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAAAGAAGAAGAAAAAACTAGGACAAAGAGTGAGTAAGCTGGGTTCATAATTATATTAATCTTATATATTGAGGAAAAGTTTATGTAAGGAGATATCCATATGTGATTAATTGACTAGACTTTTGGTCCTGATTTGTACAGACCAGAAATATGTCAT</genome_strand>
        <mrna_strand>AGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAAAGAAGAAGAAAAAACTAGGACAAAGAGTGAGTAAGCTGGGTTCATAATTATATTAATCTTATATATTGAGGAAAAGTTTATGTAAGGAGATATCCATATGTGATTAATTGACTAGACTTTTGGTCCTGATTTGTACAGACCAGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E392495" ref_strand="+" ref_description="SGN-E392495 [TUS-36-M22](-)">
      <seq>gaaaagatagaaatattgaattctgatgaatacaaactgccacttggatattttgtttttcagattttccatttctaaggttctctttctatgacaagcaggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttccagcaccagcaacattacctcctgtagaaactaccaaaaccaatgcattttcggtggcaccggctgttgctcctatcatatttccagtacaggttaataagtcaagagagaatccaactctgtttcgacatgatcatgcgaattcatcgatgctagttggtcctgttcctatgttttcaatgcctaatccatcaaaatcgatcgaccttaacgccaaccacaattcaacaatcgagccatcgtcgttgtcactgagattatcattgtcacttgatcagggacaagcatcatttactagacactcggcatataatgtgatgtcaagtttcagtaatggagaaagcatcatccgtgtggcatgagagagatcaaaggatctctggagaaagaaaaaaaagaagaagaaaaaactaggacaaagagtgagtaagctgggttcataattatattaatcttatatattgaggaaaagtttatgtaaggagatatccatatgtgattaattgactagacttttggtcctgatttgtacagaccagaaataaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70758" stop="69462"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70458" g_stop="69763" g_length="696"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="696" r_length="696" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="697" polyA_stop="715"/>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E392495" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392495" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70458" e_stop="69763"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAAAGAAGAAGAAAAAACTAGGACAAAGAGTGAGTAAGCTGGGTTCATAATTATATTAATCTTATATATTGAGGAAAAGTTTATGTAAGGAGATATCCATATGTGATTAATTGACTAGACTTTTGGTCCTGATTTGTACAGACCAGAAAT</genome_strand>
        <mrna_strand>GAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATTTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAAAGAAGAAGAAAAAACTAGGACAAAGAGTGAGTAAGCTGGGTTCATAATTATATTAATCTTATATATTGAGGAAAAGTTTATGTAAGGAGATATCCATATGTGATTAATTGACTAGACTTTTGGTCCTGATTTGTACAGACCAGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E596595" ref_strand="-" ref_description="SGN-E596595 [40080]">
      <seq>cttaacgccaaccacaactcaacaattgagccatcgtctttgtcactgagattatcattgtcacttgatcagggacaagcatcatctactagacactcggcatataacgtgatgtcaagtttcagtaatggagaaagcatcatccgtgtggcatgagatcaaaggatctcttgagaaaaaaagaagaagaaaaaactaggacaagagtgagtaagctgggttcataattatattaatcttatatattgaggaaaagtttatgaaaaaaaaaaaaaaaaaaaaaactcgagactagttctctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70399" stop="69518"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70099" g_stop="69821" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="269" r_length="269" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="270" polyA_stop="285"/>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E596595" ref_strand="-">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>279</cumulative_length_of_scored_exons>
        <coverage percentage="0.924" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E596595" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="70099" e_stop="69821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAAAGAAGAAGAAAAAACTAGGACAAAGAGTGAGTAAGCTGGGTTCATAATTATATTAATCTTATATATTGAGGAAAAGTTTATGTAAGGAG</genome_strand>
        <mrna_strand>CTTAACGCCAACCACAACTCAACAATTGAGCCATCGTCTTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAACGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCAT----GAGATCAAAGGATCTCT--TG--AG-AAAAAAAGAAGAAGAAAAAACTAGGAC-AAGAGTGAGTAAGCTGGGTTCATAATTATATTAATCTTATATATTGAGGAAAAGTTTATGAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E617746" ref_strand="+" ref_description="SGN-E617746 [66599]">
      <seq>aaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgactcaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttgtagcaccagcaacattaccaactaccaaaaccaatgcatttccggtggcaccaactgttggtcctatcatatttccagtacagattgacaagtcaagagagtatccaactctgttgcgacatgatcatgggaattcaccgatgctagttggtcctgttcctatgttttcaatgcctaatccatcaacagcaattgaccttaacgccaaccacaactcaacaattgagccatcgtctttgtcactgagattatcattgtcacttgatcagggacaagcatcatctactagacactcggcatataacgtgatgtcaagtttcagtaatggagaaagcatcatccgtgtggcatgagatcaaaggatctcttgagaaaaaaagaagaagaaaaaactaggacaagagtgagtaagctgggttcataatttatatataatcttatatattgaggaaaagtttatgatatccatgtggtgattaatggactac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71270" stop="69526"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70970" g_stop="70822" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70357" g_stop="69829" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="661" r_length="512" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E617746" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E617746" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70970" e_stop="70822"/>
          <exon e_start="70357" e_stop="69829"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAAAGAAGAAGAAAAAACTAGGACAAAGAGTGAGTAAGCTGGGTTCATAA-TTATAT-TAATCTTATATATTGAGGAAAAGTTTAT</genome_strand>
        <mrna_strand>AAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACTCAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTGTAGCACCAGCAACATTA---CC------AACTACCAAAACCAATGCATTTCCGGTGGCACCAACTGTTGGTCCTATCATATTTCCAGTACAGATTGACAAGTCAAGAGAGTATCCAACTCTGTTGCGACATGATCATGGGAATTCACCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAACAGCAATTGACCTTAACGCCAACCACAACTCAACAATTGAGCCATCGTCTTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAACGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCAT----GAGATCAAAGGATCTCT--TG--AG-AAAAAAAGAAGAAGAAAAAACTAGGAC-AAGAGTGAGTAAGCTGGGTTCATAATTTATATATAATCTTATATATTGAGGAAAAGTTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E696933" ref_strand="+" ref_description="SGN-E696933 [LH_Ea10G19](-)">
      <seq>gcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttccagcaccagcaacagcaacattacctactgtagaaactaccaaaaccaatgcatttccggtggcaccggctgttgctcctatcatatttccagtacaggttaacaagtcaagagagaatccaactctgtttcgacatgatcatgggaattcatcgatgctagttggtcctgttcctatgttttcaatgcctaatccatcgaaagcgattgaccttaacgccaaccacaactcaacaatcgagccttcgtcgtggtcactgagattatcattgtcacttgatcagggacaagcatcatctactagacactcggcatataatgtggggtcaagtttcagtaatggagaaagcatcatccgttagagggagagagatcaaaggatctctgagaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71177" stop="69597"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70877" g_stop="70822" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70357" g_stop="69901" g_length="457"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="517" r_length="461" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E696933" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E696933" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70877" e_stop="70822"/>
          <exon e_start="70357" e_stop="69901"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGC-A-A-CA---TTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAAAGAAGAAGA</genome_strand>
        <mrna_strand>GCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACAGCAACATTACCTACTGTAGAAACTACCAAAACCAATGCATTTCCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAACAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGGGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCGAAAGCGATTGACCTTAACGCCAACCACAACTCAACAATCGAGCCTTCGTCGTGGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGGGGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGT-TAGAGGGAGAGAGATCAAAGGATCTCT-GAGAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E269158" ref_strand="-" ref_description="SGN-E269158 [cLEI-16-G16]">
      <seq>ttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggaaaataagctagaaatcccagttccagcaccagcaacattacctcgtgtagaaactaccaaaaccaatgcattttcggtggcaccggatgttgctcctatcatatttccaggacaggttaataagtcaagagagaatccaactttgtttggacatgatcatgcgaattcatcgatgctagttggtcctgttcttatgttttcaatgcctaatccatcaaaatcgatggactttaacgccaaccacaattcaactatcgagccatcgtcgttgtcactgagattatcattgtcacttgatcagggacaagcatcatctactagacactcggcatataatgtgatgtcaagtttcagcaatggagaaagcatcatccgtgtggcatgagacagatcaaaggatctttggagaaagaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71141" stop="69606"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70841" g_stop="70822" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="20" r_length="20" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70357" g_stop="69906" g_length="452"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="472" r_length="452" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E269158" ref_strand="-">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E269158" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="70841" e_stop="70822"/>
          <exon e_start="70357" e_stop="69906"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAAAGAA</genome_strand>
        <mrna_strand>TTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCTAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCGTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGATGTTGCTCCTATCATATTTCCAGGACAGGTTAATAAGTCAAGAGAGAATCCAACTTTGTTTGGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCTTATGTTTTCAATGCCTAATCCATCAAAATCGATGGACTTTAACGCCAACCACAATTCAACTATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGCAATGGAGAAAGCATCATCCGTGTGGCATGAGACAGATCAAAGGATCTTTGGAGAAAGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E693093" ref_strand="+" ref_description="SGN-E693093 [LH_Ea10G19]">
      <seq>ttaacctcaaccgtcgccgccgtcgatctagcctctttcatatcaccactgactcggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttccagcaccagcaacagcaacattacctactgtagaaactaccaaaaccaatgcatttccggtggcaccggctgttgctcctatcatatttccagtacaggttaacaagtcaagagagaatccaactctgtttcgacatgatcatgggaattcatcgatgctagttggtcctgttcctatgttttcaatgcctaatccatcgaaagcgattgaccttaacgccaaccacaactcaacaatcgagccttcgtctttgtcactgagattatcattgtcacttgatcagggacaagcatcatctactagacactcggcatataatgtgatgtcaagtttcagtaatggagaaagcatcatccgtgtggcatgagagagatcaaaggatctctggagaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71175" stop="69606"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70877" g_stop="70822" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="0.946"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70357" g_stop="69908" g_length="450"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="512" r_length="456" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E693093" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>506</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E693093" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70877" e_stop="70822"/>
          <exon e_start="70357" e_stop="69908"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACA------TTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAAAG</genome_strand>
        <mrna_strand>TTAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTCATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACAGCAACATTACCTACTGTAGAAACTACCAAAACCAATGCATTTCCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAACAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGGGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCGAAAGCGATTGACCTTAACGCCAACCACAACTCAACAATCGAGCCTTCGTCTTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E611363" ref_strand="+" ref_description="SGN-E611363 [61114]">
      <seq>ggaattcaccgatgctagttggtcctgttcctatgttttcaatgcctaatccatcaacagcaattgaccttaacgccaaccacaactcaacaattgagccatcgtctttgtcactgagattatcattgtcacttgatcagggacaagcatcatctactagacactcggcatataacgtgatgtcaagtttcagtaatggagaaagcatcatccgtgtggcatgagatcaaaggatctcttgagaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70466" stop="69609"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70167" g_stop="69909" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="255" r_length="255" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E611363" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>259</cumulative_length_of_scored_exons>
        <coverage percentage="1.016" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E611363" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70167" e_stop="69909"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAAA</genome_strand>
        <mrna_strand>GGAATTCACCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAACAGCAATTGACCTTAACGCCAACCACAACTCAACAATTGAGCCATCGTCTTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAACGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCAT----GAGATCAAAGGATCTCTTGAGAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E576816" ref_strand="+" ref_description="SGN-E576816 [60093]">
      <seq>ctgactcggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttgtagcaccagcaacattaccaactaccaaaaccaatgcatttccggtggcaccaactgttggtcctatcatatttccagtacagattgacaagtcaagagagtatccaactctgttgcgacatgatcatgggaattcaccgatgctagttggtcctgttcctatgttttcaatgcctaatccatcaacagcaattgaccttaacgccaaccacaactcaacaattgagccatcgtctttgtcactgagattatcattgtcacttgatcagggacaagcatcatctactagacactcggcatataacgtgatgtcaagtttcagtaatggagaaagcatcatccgtgtggcatgagatcaaaggatctcttgagaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70658" stop="69609"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70357" g_stop="69910" g_length="448"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="443" r_length="435" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E576816" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>448</cumulative_length_of_scored_exons>
        <coverage percentage="1.011" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E576816" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70357" e_stop="69910"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAA</genome_strand>
        <mrna_strand>GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTGTAGCACCAGCAACATTA---CC------AACTACCAAAACCAATGCATTTCCGGTGGCACCAACTGTTGGTCCTATCATATTTCCAGTACAGATTGACAAGTCAAGAGAGTATCCAACTCTGTTGCGACATGATCATGGGAATTCACCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAACAGCAATTGACCTTAACGCCAACCACAACTCAACAATTGAGCCATCGTCTTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAACGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCAT----GAGATCAAAGGATCTCTTGAGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E591848" ref_strand="+" ref_description="SGN-E591848 [45569]">
      <seq>gtctaaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacggcggtgataacaatgaatcctctaaagtggctcaggatgaaggttatgcctctgcagatgacgctgttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttcggattgcagaaagtgggaaaaggagactggagaggaatctctcgtaacttcgttaagactcgcacaccgactcaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggaaaataaacaagaaatcccagttctagcaccagcaacattaccaactaccaaaaccaatgcatttccgggggcaccagctgttggtcctatcatatttccagtacaaattgacaagtcaagagagaatccaactctgttgcgacatgatcatgggaattcaccgatgctagttggtcctgttcctatgttttcaatgcctaatccatcaacagcaattgaccttaacgccaaccacaagtcaacaattgagccatcgtctttgtcactgagattatcattgtcacttgatcagggacaagcatcatctactagacactcnggcatataacgttgatgcccaagttttcagtaattggagaaaagcatcatccgtgtgggcatgagatcaaaggatctcttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71931" stop="69622"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71631" g_stop="71467" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="159" r_length="159" r_score="0.945"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.964" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="368" r_length="209" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70357" g_stop="69922" g_length="436"/>
          <reference_exon_boundary r_type="cDNA" r_start="369" r_stop="798" r_length="430" r_score="0.885"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E591848" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>810</cumulative_length_of_scored_exons>
        <coverage percentage="1.015" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E591848" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71631" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
          <exon e_start="70357" e_stop="69922"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTC-GGCATATAATG-TGATG-TCAAG-TTTCAGTAA-TGGAG-AAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGA</genome_strand>
        <mrna_strand>GTCTAAACGATCTTTCACAGTACGAGCAACCGAATGCT---AACAACAACAACAA---CGGCGGTGATAACAATGAATCCTCTAAAGTGGCTCAGGATGAAGGTTATGCCTCTGCAGATGACGCTGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTCGGATTGCAGAAAGTGGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTTAAGACTCGCACACCGACTCAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAACAAGAAATCCCAGTTCTAGCACCAGCAACATTA---CC------AACTACCAAAACCAATGCATTTCCGGGGGCACCAGCTGTTGGTCCTATCATATTTCCAGTACAAATTGACAAGTCAAGAGAGAATCCAACTCTGTTGCGACATGATCATGGGAATTCACCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAACAGCAATTGACCTTAACGCCAACCACAAGTCAACAATTGAGCCATCGTCTTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCNGGCATATAACGTTGATGCCCAAGTTTTCAGTAATTGGAGAAAAGCATCATCCGTGTGG---GCATGAGATCAAAGGATCTCTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E378167" ref_strand="+" ref_description="SGN-E378167 [TUS-23-N23]">
      <seq>tcaatttcaataggtgtgtacggttttcaattgacgaagtgtatgtttagtcatcaacactttgtataaattgatttttttattgattcgtggaatcttccagaaagatgtcgagcgtttgcagtgataagtcgtcgtcgacgccggcggtaaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgcaggatgaaggttatgcctctgcagatgacgcggttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcaaaaagttggaaaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgacacaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttccagcaccagcaacattacctcctgtagaaactaccaaaaccaatgcattttcggtggcaccggctgttgctcctatcatatttccagtacaggttaataagtcaagagagaatccaactctgtttcgacatgatcatgcgaattcatcgatgctagttggtcctgttcctatgttttcaatgcctaatccatcaaaatcgatcgaccttaacgccaccacaattcaacaatcgangcatcgtcgttgtcactgagattatcattgtcacttgatcagggacaagcatcatctact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72159" stop="69710"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71859" g_stop="71467" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="393" r_length="393" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="602" r_length="209" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70357" g_stop="70010" g_length="348"/>
          <reference_exon_boundary r_type="cDNA" r_start="603" r_stop="949" r_length="347" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E378167" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>950</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E378167" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71859" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
          <exon e_start="70357" e_stop="70010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACT</genome_strand>
        <mrna_strand>TCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCC-ACCACAATTCAACAATCGANGCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E709928" ref_strand="+" ref_description="SGN-E709928 [FA53CF12]">
      <seq>cgttatagatgtcgagcgtttgcagtgataagtcgtcgtcgacgccggcggtaaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgcaggatgaaggttatgcctctgcagatgacgcggttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcaaaaagttggaaaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgacacaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttccagcaccagcaacattacctcctgtagaaactaccaaaaccaatgcattttcggtggcaccggctgttgctcctatcatatttccagtacaggttaataagtcaagagagaatccaactctgtttcgacatgatcatgcgaattcatcgatgctagttggtcctgttcctatgttttcaatgcctaatccatcaaaatcgatcgaccttaacgccaaccacaatttcacaatcgagccatcgtcgttgtcactgagattatcattgtcacttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72056" stop="69731"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71756" g_stop="71467" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="5" r_stop="294" r_length="290" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="503" r_length="209" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70357" g_stop="70031" g_length="327"/>
          <reference_exon_boundary r_type="cDNA" r_start="504" r_stop="830" r_length="327" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E709928" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>826</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E709928" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71756" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
          <exon e_start="70357" e_stop="70031"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGAT</genome_strand>
        <mrna_strand>ATAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTTCACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E317204" ref_strand="+" ref_description="SGN-E317204 [cTOA-28-A10]">
      <seq>ggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgcaggatgaaggttatgcctctgcagatgacgcggttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcaaaaagttggaaaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgacacaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttccagcaccagcaacattacctcctgtagaaactaccaaaaccaatgcattttcggtggcaccggctgttgctcctatcatatttccagtacaggttaataagtcaagagagaatccaactctgtttcgacatgatcatgcgaattcatcgatgctagttggtcctggtccctatgttttcatgcctaatccatcaaaatcgatcgaccttaacgccaaccacattcaacaatcgagccatcgtcgttgtcactgagattatcattgtcacttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72004" stop="69732"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71704" g_stop="71467" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="238" r_length="238" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="447" r_length="209" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70357" g_stop="70032" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="772" r_length="325" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E317204" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>773</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E317204" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71704" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
          <exon e_start="70357" e_stop="70032"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCT-GTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGA</genome_strand>
        <mrna_strand>GGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGGTCCCTATGTTTTC-ATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCAC-ATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E551804" ref_strand="+" ref_description="SGN-E551804 [cTSB-1-O14]">
      <seq>gtcgatctagcctctttgatatcaccactgactcggtattcattttttattcatgtcttccatttatcaaacttgtttctcacccttattattaatcgagtgaaatctaacaatttctttgaattactacaattatatttctctcattttgccatttattggtgaatttcctttgagtaggtggtaagtgattgtgtatagagagagaaaattagatggtttgattttaatacttcgatcttatcactctttaacagaaggagtagtaatgtgattctttcattgttcttgttttgaattgatattgatgctgggtttttgttgttattcttttgtgtcttttctctaatagattctttttcattggtgtcaagttctttgtttatacttgccttctggaaaagatagaaatattgaattctgatgaatacaaactgccacttggatattttgtttttcagattttccatttctaaggttctctttctatgacaagcaggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttccagcaccaagaacattacctcctgtagaaactaccaaaaccaatgcattttcggtggcaccggctgttgctcctatcatatttccagtacaggttaataagtcaagagagaatccaactctgtttcgacatgatcatgcgaattcatcgatgctagttggtcctgttcctatgttttcaatgcctaatccatcaaaatcgatcgaccttaacgccaaccacaattcaacaatcgaaccatcgtcgttgtcactgagattatcattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71156" stop="69740"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70856" g_stop="70040" g_length="817"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="817" r_length="817" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E551804" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>817</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E551804" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70856" e_stop="70040"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTG</genome_strand>
        <mrna_strand>GTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAAGAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAACCATCGTCGTTGTCACTGAGATTATCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E730228" ref_strand="+" ref_description="SGN-E730228 [LA23BH12]">
      <seq>acggttttcaattgacgaagtgtatgtttagtcatcaacactttgtataaattgatttttttattgattcgtggaatcttccagaaagatgtcgagcgtttgcagtgataagtcgtcgtcgacgccggcggtaaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgcaggatgaaggttatgcctctgcagatgacgcggttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcaaaaagttggaaaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgacacaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttccagcaccagcaacattacctcctgtagaaactaccaaaaccaatgcattttcggtggcaccggctgttgctcctatcatatttccagtacaggttaataagtcaagagagaatccaactctgtttcgacatgatcatgcgaattcatcgatgctagttggtcctgttcctatgttttcatgcctaatccatcaaaatcgatcgaccttaacgccaaccacaattcaacaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72140" stop="69774"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71840" g_stop="71467" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="374" r_length="374" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="583" r_length="209" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70357" g_stop="70074" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="584" r_stop="866" r_length="283" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E730228" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>867</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E730228" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71840" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
          <exon e_start="70357" e_stop="70074"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAAT</genome_strand>
        <mrna_strand>ACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTC-ATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E731864" ref_strand="+" ref_description="SGN-E731864 [LA28BF04]">
      <seq>cttcctttcaatttcaataggtgtgtacggttttcaattgacgaagtgtatgtttagtcatcaacactttgtataaattgatttttttattgattcgtggaatcttccagaaagatgtcgagcgtttgcagtgataagtcgtcgtcgacgccggcggtaaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgcaggatgaaggttatgcctctgcagatgacgcggttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcaaaaagttggaaaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgacacaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttccagcaccagcaacattacctcctgtagaaactaccaaaaccaatgcattttcggtggcaccggctgttgctcctatcatatttccagtacaggttaataagtcaagagagaatccaactctgtttcgacatgatcatgcgaattcatcgatgctagttggtcctgttcctatgtttttcatgcctaatccatcaaatcgatcgaccttaccgccaaccacaatttcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72166" stop="69779"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71866" g_stop="71467" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="400" r_length="400" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="609" r_length="209" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70357" g_stop="70076" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="610" r_stop="890" r_length="281" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E731864" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>891</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E731864" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71866" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
          <exon e_start="70357" e_stop="70076"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACA</genome_strand>
        <mrna_strand>CTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTTCATGCCTAATCCATC-AAATCGATCGACCTTACCGCCAACCACAATTTCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E704059" ref_strand="+" ref_description="SGN-E704059 [FA23BA03]">
      <seq>cgggtttttcttcctttcaatttcaataggtgtgtacggttttcaattgacgaagtgtatgtttagtcatcaacactttgtataaattgatttttttattgattcgtggaatcttccagaaagatgtcgagcgtttgcagtgataagtcgtcgtcgacgccggcggtaaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgcaggatgaaggttatgcctctgcagatgacgcggttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcaaaaagttggaaaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgacacaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttccagcaccagcaacattacctcctgtagaaactaccaaaaccaatgcattttcggtggcaccggctgttgctcctatcatatttccagtacaggttaataagtcaagagagaatccaactctgtttcgacatgatcatgcgaattcatcgatgctagttggtcctgttcctatgttttcaatgcctaatccatcaaaatcgatcgacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72175" stop="69798"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71875" g_stop="71467" g_length="409"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="409" r_length="409" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="410" r_stop="618" r_length="209" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70357" g_stop="70098" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="619" r_stop="878" r_length="260" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E704059" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>878</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E704059" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71875" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
          <exon e_start="70357" e_stop="70098"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGGTTTTTCTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCT</genome_strand>
        <mrna_strand>CGGGTTTTTCTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E728009" ref_strand="+" ref_description="SGN-E728009 [LA16BF10]">
      <seq>cttcctttcaatttcaataggtgtgtacggttttcaattgacgaagtgtatgtttagtcatcaacactttgtataaattgatttttttattgattcgtggaatcttccagaaagatgtcgagcgtttgcagtgataagtcgtcgtcgacgccggcggtaaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgcaggatgaaggttatgcctctgcagatgacgcggttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcaaaaagttggaaaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgacacaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttccagcaccagcaacattacctcctgtagaaactaccaaaaccaatgcattttcggtggcaccggctgttgctcctatcatatttccagtacaggttaataagtcaagagagaatccaactctgtttcgacatgatcatgcgaattcatcgatgctagttgggccctgtttctatgttttcaatgcctaatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72166" stop="69816"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71866" g_stop="71467" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="400" r_length="400" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="609" r_length="209" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70357" g_stop="70116" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="610" r_stop="852" r_length="243" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E728009" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>851</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E728009" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71866" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
          <exon e_start="70357" e_stop="70116"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTT-GGTCCTGTTCCTATGTTTTCAATGCCTAATCC</genome_strand>
        <mrna_strand>CTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGGCCCTGTTTCTATGTTTTCAATGCCTAATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E556389" ref_strand="+" ref_description="SGN-E556389 [cTSD-3-F16]">
      <seq>gtcgatctagcctctttgatatcaccactgactcggtattcattttttattcatgtcttccatttatcaaacttgtttctcacccttattattaatcgagtgaaatctaacaatttctttgaattactacaattatatttctctcattttgccatttattggtgaatttcctttgagtaggtggtaagtgattgtgtatagagagagaaaattagatggtttgattttaatacttcgatcttatcactctttaacagaaggagtagtaatgtgattctttcattgttcttgttttgaattgatattgatgctgggtttttgttgttattcttttgtgtcttttctctaatagattctttttcattggtgtcaagttctttgtttatacttgccttctggaaaagatagaaatattgaattctgatgaatacaaactgccacttggatattttgtttttcagattttccatttctaaggttctctttctatgacaagcaggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttccagcaccagcaacattacctcctgtagaaactaccaaaaccaatgcattttcggtggcaccggctgttgctcctatcatatttccagtacaggttaataagtcaagagagaatccaactctgtttcgacatgatcatgcgaattcatcaatgctagttggtcctgttcctatgttttcaatgcctaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71156" stop="69817"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70856" g_stop="70117" g_length="740"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="740" r_length="740" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E556389" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>740</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E556389" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70856" e_stop="70117"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATC</genome_strand>
        <mrna_strand>GTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCAATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E277016" ref_strand="+" ref_description="SGN-E277016 [cLEN-22-N18]">
      <seq>tgaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgcaggatgaaggttatgcctctgcagatgacgcggttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcaaaaagttggaaaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgacacaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttccagcaccagcaacattacctcctgtagaaactaccaaaaccaatgcattttcggtggcaccggctgttgctcctatcatatttccagtacaggttaataagtcaagagagaatccaactctgtttcgacatgatcatgcgaattcatcgatgctagttggtcctgttcctatgttttcaatgcctaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71928" stop="69818"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71628" g_stop="71467" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="162" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="371" r_length="209" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70357" g_stop="70118" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="611" r_length="240" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E277016" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>611</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E277016" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71628" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
          <exon e_start="70357" e_stop="70118"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAAT</genome_strand>
        <mrna_strand>TGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E705000" ref_strand="+" ref_description="SGN-E705000 [FA25DE09]">
      <seq>cttcctttcaatttcaataggtgtgtacggttttcaattgacgaagtgtatgtttagtcatcaacactttgtataaattgatttttttattgattcgtggaatcttccagaaagatgtcgagcgtttgcagtgataagtcgtcgtcgacgccggcggtaaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgcaggatgaaggttatgcctctgcagatgacgcggttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcaaaaagttggaaaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgacacaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttccagcaccagcaacattacctcctgtagaaactaccaaaaccaatgcattttcggtggcaccggctgttgctcctatcatatttccagtacaggttaataagtcaagagagaatccaactctgtttcgacatgatcatgcgaattcatcgatgctagttggtcctgttcctatgttttcaatgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72166" stop="69822"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71866" g_stop="71467" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="400" r_length="400" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="609" r_length="209" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70357" g_stop="70122" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="610" r_stop="845" r_length="236" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E705000" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>845</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E705000" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71866" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
          <exon e_start="70357" e_stop="70122"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCC</genome_strand>
        <mrna_strand>CTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E698939" ref_strand="+" ref_description="SGN-E698939 [FA08AC07]">
      <seq>cgtatgtttagtcatcaacactttgtataaattgatttttttattgattcgtggaatcttccagaaagatgtcgagcgtttgcagtgataagtcgtcgtcgacgccggcggtaaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgcaggatgaaggttatgcctctgcagatgacgcggttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcaaaaagttggaaaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgacacaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcacccactgactcggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttccagcaccagcaacattacctcctgtagaaactaccaaaaccaatgcattttcggtggcacccggctgttgctcctatcatatttccagtacaggttaataagtcaagagagaatccaactctgtttcgaccttgatcatgcgaattcatcgatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72119" stop="69852"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71820" g_stop="71467" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="354" r_length="354" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="564" r_length="210" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70357" g_stop="70152" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="772" r_length="208" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E698939" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>769</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E698939" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71820" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
          <exon e_start="70357" e_stop="70152"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCA-CCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCA-CCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGA-CATGATCATGCGAATTCATCGATGCT</genome_strand>
        <mrna_strand>CGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACCTTGATCATGCGAATTCATCGATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E392259" ref_strand="+" ref_description="SGN-E392259 [TUS-36-M22]">
      <seq>ctttgatatcaccactgactcggtattcattttttattcatgtcttccatttatcaaacttgtttctcacccttattattaatcgagtgaaatctaacaatttctttgaattactacaattatatttctctcattttgccatttattggtgaatttcctttgagtaggtggtaagtgattgtgtatagagagagaaaattagatggtttgattttaatacttcgatcttatcactctttaacagaaggagtagtaatgtgattctttcattgttcttgttttgaattgatattgatgctgggtttttgttgttattcttttgtgtcttttctctaatagattctttttcattggtgtcaagttctttgtttatacttgccttctggaaaagatagaaatattgaattctgatgaatacaaactgccacttggatattttgtttttcagattttccatttctaaggttctctttctatgacaagcaggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttccagcaccagcaacattacctcctgtagaaactaccaaaaccaatgcattttcggtggcaccggctgttgctcctatcatatttccagtacaggttaataagtcaagagagaatccaactctgtttcgacatgatcatgcgaattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71143" stop="69861"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70843" g_stop="70161" g_length="683"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="683" r_length="683" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E392259" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>683</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392259" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70843" e_stop="70161"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTC</genome_strand>
        <mrna_strand>CTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E561790" ref_strand="+" ref_description="SGN-E561790 [19208]">
      <seq>tggatccccgggctgcaggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctaaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacggcggtgataacaatgaatcctctaaagtggctcaggatgaaggttatgcctctgcagatgacgctgttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcagaaagtgggaaaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgactcaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttgtagcaccagcaacattaccaaataccaaaagcaatgcatttccggtggcaccaactgttggtcctatcatatttccagtacagattgacaagtcaagagagtatccaactctgttgcgacatgatcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72005" stop="69869"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71701" g_stop="71467" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="246" r_length="229" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.964" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="455" r_length="209" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70357" g_stop="70169" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="635" r_length="180" r_score="0.889"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E561790" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E561790" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71701" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
          <exon e_start="70357" e_stop="70169"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCAT</genome_strand>
        <mrna_strand>GGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTAAACGATCTTTCACAGTACGAGCAACCGAATGCT---AACAACAACAACAA---CGGCGGTGATAACAATGAATCCTCTAAAGTGGCTCAGGATGAAGGTTATGCCTCTGCAGATGACGCTGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAGAAAGTGGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACTCAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTGTAGCACCAGCAACATTA---CC-----AAA-TACCAAAAGCAATGCATTTCCGGTGGCACCAACTGTTGGTCCTATCATATTTCCAGTACAGATTGACAAGTCAAGAGAGTATCCAACTCTGTTGCGACATGATCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E731203" ref_strand="+" ref_description="SGN-E731203 [LA26BG09]">
      <seq>gaatcggcacgaggcttcctttcaatttcaataggtgtgtacggttttcaattgacgaagtgtatgtttagtcatcaacactttgtataaattgatttttttattgattcgtggaatcttccagaaagatgtcgagcgtttgcagtgataagtcgtcgtcgacgccggcggtaaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgcaggatgaaggttatgcctctgcagatgacgcggttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcaaaaagttggaaaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgacacaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttccagcaccagcaacattacctcctgtagaaactaccaaaaccaatgcattttcggtggcaccggctgttgctcctatcatatttccagtacaggttaataagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72166" stop="69903"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71866" g_stop="71467" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="414" r_length="400" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="623" r_length="209" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70357" g_stop="70203" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="624" r_stop="778" r_length="155" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E731203" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>764</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E731203" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71866" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
          <exon e_start="70357" e_stop="70203"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTC</genome_strand>
        <mrna_strand>CTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E576082" ref_strand="+" ref_description="SGN-E576082 [59243]">
      <seq>tttcaatacgtgtgtacggtttccgtttgacggagtgtatgtttagtcatcaccactttgtatcaactgatttttattgattcgtggaaacttccaggaacgatgtcgagcgtttacagcgataagtcgtcgtcgacgccggcagttaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctaaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacggcggtgataacaatgaatcctctaaagtggctcaggatgaaggttatgcctctgcagatgacgctgttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttcggattgcagaaagtgggaaaaggagactggagaggaatctctcgtaacttcgttaagactcgcacaccgactcaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaacgaggtggaaaataaacaagaaatcccagttctagcaccaggaacattaccaagtaccaaagacaatgcatttccgggggcaccagctgttggtcctatcatatttccagta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72155" stop="69917"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71855" g_stop="71467" g_length="389"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="382" r_length="382" r_score="0.931"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.964" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="591" r_length="209" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70357" g_stop="70217" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="592" r_stop="724" r_length="133" r_score="0.851"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E576082" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>739</cumulative_length_of_scored_exons>
        <coverage percentage="1.021" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E576082" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71855" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
          <exon e_start="70357" e_stop="70217"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCA-GAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAA-GAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTA</genome_strand>
        <mrna_strand>TTTCAATACGTGTGTACGGTTTCCGTTTGACGGAGTGTATGTTTAGTCATCACCACTTTGTATCAACTGA--TTTTTATTGATTCGTGGAAACTTCCAGGAACGATGTCGAGCGTTTACAGCGATAAGTCGTCGTCGACGCCGGCAGTTACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTAAACGATCTTTCACAGTACGAGCAACCGAATGCT---AACAACAACAACAA---CGGCGGTGATAACAATGAATCCTCTAAAGTGGCTCAGGATGAAGGTTATGCCTCTGCAGATGACGCTGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTCGGATTGCAGAAAGTGGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTTAAGACTCGCACACCGACTCAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAACGAGGTGGAAAATAAACAAGAAATCCCAGTTCTAGCACCAGGAACATTA---CC------AAGTACCAAAGACAATGCATTTCCGGGGGCACCAGCTGTTGGTCCTATCATATTTCCAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E584469" ref_strand="+" ref_description="SGN-E584469 [10296]">
      <seq>ttaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcatccgaatgctaacaacaacaacaacggcggtgataacaatgaatcctctaaagtggctcaggatgaaggttatgcctctgcagatgacgctgttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcagaaagtgggaaaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgactcaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttgtagcaccagcaacattaccaactaccaaaaccaatgcatttccggtggcaaccaactgttgggtcctatcatatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72009" stop="69983"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71709" g_stop="71467" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="237" r_length="237" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.964" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="446" r_length="209" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70357" g_stop="70222" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="575" r_length="129" r_score="0.860"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E584469" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>588</cumulative_length_of_scored_exons>
        <coverage percentage="1.023" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E584469" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71709" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
          <exon e_start="70357" e_stop="70222"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGC-ACCGGCTGTT-GCTCCTATCATATTTC</genome_strand>
        <mrna_strand>TTACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCATCCGAATGCT---AACAACAACAACAA---CGGCGGTGATAACAATGAATCCTCTAAAGTGGCTCAGGATGAAGGTTATGCCTCTGCAGATGACGCTGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAGAAAGTGGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACTCAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTGTAGCACCAGCAACATTA---CC------AACTACCAAAACCAATGCATTTCCGGTGGCAACCAACTGTTGGGTCCTATCATATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E265388" ref_strand="+" ref_description="SGN-E265388 [cLEI-9-K9]">
      <seq>tttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgcaggatgaaggttatgcctctgcagatgacgcggttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcaaaaagttggaaaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgacacaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggaaaataagcaagaaatcccagttccagcaccagcaacattacctcctgtagaaactaccaaaaccaatgcattttcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71974" stop="69952"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71674" g_stop="71467" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="208" r_length="208" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="417" r_length="209" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70357" g_stop="70252" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="523" r_length="106" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E265388" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>523</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265388" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71674" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
          <exon e_start="70357" e_stop="70252"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGG</genome_strand>
        <mrna_strand>TTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E590958" ref_strand="+" ref_description="SGN-E590958 [44565]">
      <seq>cttcctttcaatttcaatttcaataggtgtgtacggtttccgtttgacggagtgtatgtttagtcatcaccactttgtatcaattgattttttattgattcgtggaaacttccagaacgatgtcgagcgtttacagcgataagtcgtcgtcgacgccggcagttaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctaaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacggcggtgataacaatgaatcctctaaagtggctcaggatgaaggttatgcctctgcagatgacgctgttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcagaaagtgggaaaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgactcaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggacaataagcaagaaatctcagttgtagcaccagcaacattaccaactaccaaaaaccattgcatttccggttggcaacaaactgttggttctatcatatttccagtacagattgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72161" stop="69909"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71872" g_stop="71467" g_length="406"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="399" r_length="399" r_score="0.929"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.964" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="400" r_stop="608" r_length="209" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70357" g_stop="70283" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="609" r_stop="683" r_length="75" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E590958" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>690</cumulative_length_of_scored_exons>
        <coverage percentage="0.918" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E590958" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71872" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
          <exon e_start="70357" e_stop="70283"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTCTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCT</genome_strand>
        <mrna_strand>CTTCCTTTCAATTTCAATTTCAATAGGTGTGTACGGTTTCCGTTTGACGGAGTGTATGTTTAGTCATCACCACTTTGTATCAATTGA-TTTTTTATTGATTCGTGGAAACTTCCAGAACGATGTCGAGCGTTTACAGCGATAAGTCGTCGTCGACGCCGGCAGTTACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTAAACGATCTTTCACAGTACGAGCAACCGAATGCT---AACAACAACAACAA---CGGCGGTGATAACAATGAATCCTCTAAAGTGGCTCAGGATGAAGGTTATGCCTCTGCAGATGACGCTGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAGAAAGTGGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACTCAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGACAATAAGCAAGAAATCTCAGTTGTAGCACCAGCAACATTACCAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E728017" ref_strand="+" ref_description="SGN-E728017 [LA16BG07]">
      <seq>cttcctttcaatttcagtaggtgtgtacggttttcaattgacgaagtgtatgtttagtcatcaacactttgtataaattgatttttttattgattcgtggaatcttccaaaaagatgtcgagcgtttgcagagataagtcgacgtcgacgccggcggtaaccggcggcagatttggaggataaatcatgttgatttggttgtgagagtaatagtggatcctatgaggaagagcgagaatctgaacgatctttcacaggacgagcaaccgaatgctaacaacaacaactcacaacggcggcggtgataacaatgaatcctctaaagtggcgcaggatgaaggatatgcctctgcatatgacgcggatcaacatcattccaacagtggtcgcgagcgtaatagaggagttccgtggacagaggaagagcataagatattccttttatgattgcgaaaagttggaaaaggacactggagaggaatctctcgtaacttcgtaaagactcgcacaccgacacaggttgcaagtcatgctcacaaatacttcctccggcgaaggaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgcctctagaagaggtggaaaataagcaagaaatcccagttccagcaccagcaacattacctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72166" stop="69985"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71866" g_stop="71467" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="403" r_length="403" r_score="0.942"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="0.92"/>
            <acceptor a_prob="0.964" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="612" r_length="209" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70357" g_stop="70284" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="613" r_stop="686" r_length="74" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E728017" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>683</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E728017" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71866" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
          <exon e_start="70357" e_stop="70284"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTG-TTTGG-TGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAAC-AACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCC</genome_strand>
        <mrna_strand>CTTCCTTTCAATTTCAGTAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAAAAAGATGTCGAGCGTTTGCAGAGATAAGTCGACGTCGACGCCGGCGGTAACCGGCGGCAGATTTGGAGGATAAATCATGTTGATTTGGTTGTGAGAGTAATAGTGGATCCTATGAGGAAGAGCGAGAATCTGAACGATCTTTCACAGGACGAGCAACCGAATGCTAACAACAACAACTCACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGATATGCCTCTGCATATGACGCGGATCAACATCATTCCAACAGTGGTCGCGAGCGTAATAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGATATTCCTTTTATGATTGCGAAAAGTTGGAAAAGGACACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCACAAATACTTCCTCCGGCGAAGGAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCTCTAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E584467" ref_strand="+" ref_description="SGN-E584467 [10294]">
      <seq>taggtgtgtacggtttccgtttgacggagtgtatgtttagtcatcaccactttgtatcaattgattttttattgattcgtggaaacttccagaacgatgtcgagcgtttacagcgataagtcgtcgtcgacgccggcagttaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcatccgaatgctaacaacaacaacaacggcggtgataacaatgaatcctctaaagtggctcaggatgaaggttatgcctctgcagatgacgctgttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcagaaagtgggaaaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgactcaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtatgcccaatagaagaggtggaaaataagcgagaaaatccca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72149" stop="70010"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71849" g_stop="71467" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="376" r_length="376" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.964" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="585" r_length="209" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70357" g_stop="70310" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="586" r_stop="634" r_length="49" r_score="0.875"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E584467" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E584467" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71849" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
          <exon e_start="70357" e_stop="70310"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAG-AAATCCCA</genome_strand>
        <mrna_strand>TAGGTGTGTACGGTTTCCGTTTGACGGAGTGTATGTTTAGTCATCACCACTTTGTATCAATTGA-TTTTTTATTGATTCGTGGAAACTTCCAGAACGATGTCGAGCGTTTACAGCGATAAGTCGTCGTCGACGCCGGCAGTTACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCATCCGAATGCT---AACAACAACAACAA---CGGCGGTGATAACAATGAATCCTCTAAAGTGGCTCAGGATGAAGGTTATGCCTCTGCAGATGACGCTGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAGAAAGTGGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACTCAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTATGCCCAATAGAAGAGGTGGAAAATAAGCGAGAAAATCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E573632" ref_strand="+" ref_description="SGN-E573632 [32973]">
      <seq>ccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcatccgaatgctaacaacaacaacaacggcggtgataacaatgaatcctctaaagtggctcaggatgaaggttatgcctctgcagatgacgctgttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcagaaagtgggaaaaggagactggagcaggaatctctcgtaacttcgtaaagactcgcacaccgactcaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagaggtggacaataagcaagaaatccca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72006" stop="70010"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71706" g_stop="71467" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="234" r_length="234" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.964" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="444" r_length="210" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70357" g_stop="70310" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="445" r_stop="492" r_length="48" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E573632" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>497</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E573632" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71706" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
          <exon e_start="70357" e_stop="70310"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAG-AGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCA</genome_strand>
        <mrna_strand>CCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCATCCGAATGCT---AACAACAACAACAA---CGGCGGTGATAACAATGAATCCTCTAAAGTGGCTCAGGATGAAGGTTATGCCTCTGCAGATGACGCTGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAGAAAGTGGGAAAAGGAGACTGGAGCAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACTCAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGGTGGACAATAAGCAAGAAATCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E581669" ref_strand="+" ref_description="SGN-E581669 [7296]">
      <seq>gtgtgtacggtttccgtttgacggagtgtatgtttagtcatcaccactttgtatcaattgattgtggattgattcgtggaaacttccagaacgatgtcgagcgtttacagcgataagtcgtcgtcgacgccggcagttaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcatccgaatgctattaacaacaacaacggcggtgataacaatgaatcctctaaagtggctcaggatgaaggttatgcctctgcagatgacgctgttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcagaaagtgggacaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgactcaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaatgccaatagaagagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72146" stop="70033"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71846" g_stop="71467" g_length="380"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="373" r_length="373" r_score="0.929"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.964" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="582" r_length="209" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70357" g_stop="70333" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="583" r_stop="607" r_length="25" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E581669" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="1.012" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E581669" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71846" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
          <exon e_start="70357" e_stop="70333"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGG</genome_strand>
        <mrna_strand>GTGTGTACGGTTTCCGTTTGACGGAGTGTATGTTTAGTCATCACCACTTTGTATCAATTGA-TTGTGGATTGATTCGTGGAAACTTCCAGAACGATGTCGAGCGTTTACAGCGATAAGTCGTCGTCGACGCCGGCAGTTACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCATCCGAATGCT---ATTAACAACAACAA---CGGCGGTGATAACAATGAATCCTCTAAAGTGGCTCAGGATGAAGGTTATGCCTCTGCAGATGACGCTGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAGAAAGTGGGACAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACTCAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E590623" ref_strand="+" ref_description="SGN-E590623 [44223]">
      <seq>cttcctttcaatttcaatttcaatacgtgtgtacggtttccgtttgacggagtgtatgtttagtcatcaccactttgtatcaactgatttttattgattcgtggaaacttccaggaacgatgtcgagcgtttacagcgataagtcgtcgtcgacgccggcagttaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctaaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacggcggtgataacaatgaatcctctaaagtggctcaggatgaaggttatgcctctgcagatgacgctgttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttcggattgcagaaagtgggaaaaggagactggagaggaatctctcgtaacttcgttaagactcgcacaccgactcaggttgcaagtcatgctcagaaatacttcctccggcgaagcaagctcaaccgtcgccgccgtcgatctagcctctttgatatcaccagttgactcggtatcagtaatgccaatagaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72161" stop="70035"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71872" g_stop="71467" g_length="406"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="399" r_length="399" r_score="0.916"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.964" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="400" r_stop="609" r_length="210" r_score="0.957"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70357" g_stop="70335" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="610" r_stop="632" r_length="23" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E590623" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E590623" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71872" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
          <exon e_start="70357" e_stop="70335"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTCTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCA-GAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCA-CTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGA</genome_strand>
        <mrna_strand>CTTCCTTTCAATTTCAATTTCAATACGTGTGTACGGTTTCCGTTTGACGGAGTGTATGTTTAGTCATCACCACTTTGTATCAACTGA--TTTTTATTGATTCGTGGAAACTTCCAGGAACGATGTCGAGCGTTTACAGCGATAAGTCGTCGTCGACGCCGGCAGTTACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTAAACGATCTTTCACAGTACGAGCAACCGAATGCT---AACAACAACAACAA---CGGCGGTGATAACAATGAATCCTCTAAAGTGGCTCAGGATGAAGGTTATGCCTCTGCAGATGACGCTGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTCGGATTGCAGAAAGTGGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTTAAGACTCGCACACCGACTCAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAAGCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCAGTTGACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCAGTAATGCCAATAGAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E236527" ref_strand="+" ref_description="SGN-E236527 [cLED-13-K5]">
      <seq>tttgatatcaccactgactcggtattcattttttattcatgtcttccatttatcaaacttgtttctcacccttattattaatcgagtgaaatctaacaatttctttgaattactacaattatatttctctcattttgccatttattggtgaatttcctttgagtaggtggtaagtgattgtgtatagagagagaaaattagatggtttgattttaatacttcgatcttatcactctttaacagaaggagtagtaatgtgattctttcattgttcttgttttgaattgatattgatgctgggtttttggtggtattcttttggggtcttttctctaatagattctttttcattggtgtcaagttctttgtttatacttgccttctggaaaagatagaaatattgaattctgatgaatacaaactgccacttggatattttgttttcagattttccatttctaaggttctctttctatgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71142" stop="70064"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70842" g_stop="70364" g_length="479"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="479" r_length="479" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E236527" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E236527" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70842" e_stop="70364"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTT-GTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGAC</genome_strand>
        <mrna_strand>TTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGGTGGTATTCTTTTGGGGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTG-TTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E240851" ref_strand="+" ref_description="SGN-E240851 [cLED-24-F18]">
      <seq>tttgatatcaccactgactcggtattcattttttattcatgtcttccatttatcaaacttgtttctcacccttattattaatcgagtgaaatctaacaatttctttgaattactacaattatatttctctcattttgccatttattggtgaatttcctttgagtaggtggtaagtgattgtgtatagagagagaaaattagatggtttgattttaatacttcgatcttatcactctttaacagaaggagtagtaatgtgattctttcattgttcttgttttgaattgatattgatgctgggtttttgttgttattcttttgtgtcttttctctaatagattctttttcattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71142" stop="70191"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70842" g_stop="70491" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="352" r_length="352" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E240851" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>352</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E240851" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70842" e_stop="70491"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTG</genome_strand>
        <mrna_strand>TTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E211740" ref_strand="+" ref_description="SGN-E211740 [cLEC-66-M7]">
      <seq>ttcctttcaatttcaataggtgtgtacggttttcaattgacgaagtgtatgtttagtcatcaacactttgtataaattgatttttttattgattcgtggaatcttccagaaagatgtcgagcgtttgcagtgataagtcgtcgtcgacgccggcggtaaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgcaggatgaaggttatgcctctgcagatgacgcggttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcaaaaagttggaaaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgacacaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72165" stop="70513"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71865" g_stop="71467" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="399" r_length="399" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="400" r_stop="608" r_length="209" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E211740" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>608</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E211740" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71865" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG</genome_strand>
        <mrna_strand>TTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E463806" ref_strand="+" ref_description="SGN-E463806 [cPRO-16-E11]">
      <seq>cttctttcttcctttcaatttcaatttcaataggtgtgtacggtttccgtttgacggagtgtatgtttagtcatcgccactttgtatcaattgattttttattgattcgtggaaacttccagaacgatgtcgagcgtttgcagcgataagtcgtcatcgacgccggcagttaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcatccgaatgctaacaacaacaacaacggcggtgataacaatgaatcctctanagtggctcaggatgaaggttatgcctctgcagatgacgctgnttcacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcagaaagtgggaaaaggagactggagaggaatctctcgtaacttcgtcaagactcgcacaccgactcaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgcccgccgtcgatctagcctctttgatatcaccactgactcggtatcagtaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72171" stop="70513"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71861" g_stop="71467" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="406" r_length="388" r_score="0.932"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="0.92"/>
            <acceptor a_prob="0.964" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="616" r_length="210" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E463806" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E463806" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71861" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCG-CCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG</genome_strand>
        <mrna_strand>TTTCAATTTCAATAGGTGTGTACGGTTTCCGTTTGACGGAGTGTATGTTTAGTCATCGCCACTTTGTATCAATTGA-TTTTTTATTGATTCGTGGAAACTTCCAGAACGATGTCGAGCGTTTGCAGCGATAAGTCGTCATCGACGCCGGCAGTTACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCATCCGAATGCT---AACAACAACAACAA---CGGCGGTGATAACAATGAATCCTCTANAGTGGCTCAGGATGAAGGTTATGCCTCTGCAGATGACGCTGNTTCACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAGAAAGTGGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTCAAGACTCGCACACCGACTCAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E450405" ref_strand="+" ref_description="SGN-E450405 [cSTS-9-C14]">
      <seq>ttccgtttgacggagtgtatgtttagtcatcaccactttgtatcaactgatttttattgattcgtggaaacttccaggaacgatgtcgagcgtttacagcgataagtcgtcgtcgacgccggcagttaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctaaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacggcggtgataacaatgaatcctctaaagtggctcaggatgaaggttatgcctctgcagatgacgctgttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttcggattgcagaaagtgggaaaaggagactggagaggaatctctcgtaacttcgttaagactcgcacaccgactcaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatcaccactgactcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72135" stop="70522"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71835" g_stop="71467" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="362" r_length="362" r_score="0.930"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.964" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70822" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="571" r_length="209" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E450405" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>578</cumulative_length_of_scored_exons>
        <coverage percentage="1.012" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E450405" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71835" e_stop="71467"/>
          <exon e_start="71030" e_stop="70822"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCA-GAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG</genome_strand>
        <mrna_strand>TTCCGTTTGACGGAGTGTATGTTTAGTCATCACCACTTTGTATCAACTGA--TTTTTATTGATTCGTGGAAACTTCCAGGAACGATGTCGAGCGTTTACAGCGATAAGTCGTCGTCGACGCCGGCAGTTACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTAAACGATCTTTCACAGTACGAGCAACCGAATGCT---AACAACAACAACAA---CGGCGGTGATAACAATGAATCCTCTAAAGTGGCTCAGGATGAAGGTTATGCCTCTGCAGATGACGCTGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTCGGATTGCAGAAAGTGGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTTAAGACTCGCACACCGACTCAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E246848" ref_strand="+" ref_description="SGN-E246848 [cLEF-41-E12]">
      <seq>tcaatttcaataggtgtgtacggttttcaattgacgaagtgtatgtttagtcatcaacactttgtatgaattgatttttttattgattcgtggaatcttccagaaagatgtcgagcgtttgcagtgataagtcgtcgtcgacgccggcggtaaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgcaggatgaaggttatgcctctgcagatgacgcggttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcaaaaagttggaaaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgacacaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctctttgatatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72159" stop="70533"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71859" g_stop="71467" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="393" r_length="393" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70833" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="591" r_length="198" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E246848" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246848" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71859" e_stop="71467"/>
          <exon e_start="71030" e_stop="70833"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCA</genome_strand>
        <mrna_strand>TCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATGAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E368402" ref_strand="+" ref_description="SGN-E368402 [TUS-23-N23]">
      <seq>tcaatttcaataggtgtgtacggttttcaattgacgaagtgtatgtttagtcatcaacactttgtataaattgatttttttattgattcgtggaatcttccagaaagatgtcgagcgtttgcagtgataagtcgtcgtcgacgccggcggtaaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaactatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgcaggatgaaggttatgcctctgcagatgacgcggttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcaaaaagttggaaaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgacacaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgccgtcgatctagcctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72159" stop="70542"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71859" g_stop="71467" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="393" r_length="393" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70842" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="582" r_length="189" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E368402" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>582</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E368402" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71859" e_stop="71467"/>
          <exon e_start="71030" e_stop="70842"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCT</genome_strand>
        <mrna_strand>TCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACTATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E697700" ref_strand="+" ref_description="SGN-E697700 [FA03DE04]">
      <seq>ctttcaatttcaataggtgtgtacggttttcaattgacgaagtgtatgtttagtcatcaacactttgtataaattgatttttttattgattcgtggaatcttccagaaagatgtcgagcgtttgcagtgataagtcgtcgtcgacgccggcggtaaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgcaggatgaaggttatgcctctgcagatgacgcggttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcaacaagttggaaaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgacaccggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaaccgtcgccgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72162" stop="70557"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71862" g_stop="71467" g_length="396"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="396" r_length="396" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70857" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="570" r_length="174" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E697700" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E697700" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71862" e_stop="71467"/>
          <exon e_start="71030" e_stop="70857"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCC</genome_strand>
        <mrna_strand>CTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAACAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACCGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E561501" ref_strand="+" ref_description="SGN-E561501 [16311]">
      <seq>ttcaatttcaatacgtgtgtacggtttccgtttgacggagtgtatgtttagtcatcaccactttgtatcaactgatttttattgattcgtggaaacttccaggaacgatgtcgagcgtttacagcgataagtcgtcgtcgacgccggcagttaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctaaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacggcggtgataacaatgaatcctctaaagtggctcaggatgaaggttatgcctctgcagatgacgctgttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttcggattgcagaaagtgggaaaaggagactggagaggaatctctcgtaacttcgttaagactcgcacaccgactcaggttgcaagtcatgctcagaaatacttcctccggcgaagcaacctcaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72160" stop="70566"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71860" g_stop="71467" g_length="394"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="387" r_length="387" r_score="0.931"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.964" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70866" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="552" r_length="165" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E561501" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.013" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E561501" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71860" e_stop="71467"/>
          <exon e_start="71030" e_stop="70866"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCA-GAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACC</genome_strand>
        <mrna_strand>TTCAATTTCAATACGTGTGTACGGTTTCCGTTTGACGGAGTGTATGTTTAGTCATCACCACTTTGTATCAACTGA--TTTTTATTGATTCGTGGAAACTTCCAGGAACGATGTCGAGCGTTTACAGCGATAAGTCGTCGTCGACGCCGGCAGTTACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTAAACGATCTTTCACAGTACGAGCAACCGAATGCT---AACAACAACAACAA---CGGCGGTGATAACAATGAATCCTCTAAAGTGGCTCAGGATGAAGGTTATGCCTCTGCAGATGACGCTGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTCGGATTGCAGAAAGTGGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTTAAGACTCGCACACCGACTCAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E246138" ref_strand="+" ref_description="SGN-E246138 [cLEF-40-M6]">
      <seq>ttttcttcctttcaatttcaataggtgtgtacggttttcaattgacgaagtgtatgtttagtcatcaacactttgtataaattgatttttttattgattcgtggaatcttccagaaagatgtcgagcgtttgcagtgataagtcgtcgtcgacgccggcggtaaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgcaggatgaaggttatgcctctgcagatgacgcggttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcaaaaagttggaaaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgacacaggttgcaagtcatgctcagaaatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72170" stop="70591"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71870" g_stop="71467" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="404" r_length="404" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70891" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="544" r_length="140" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E246138" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>544</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246138" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71870" e_stop="71467"/>
          <exon e_start="71030" e_stop="70891"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATAC</genome_strand>
        <mrna_strand>TTTTCTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E253880" ref_strand="+" ref_description="SGN-E253880 [cLEG-28-A4]">
      <seq>ttcttcctttcaatttcaataggtgtgtacggttttcaattgacgaagtgtatgtttagtcatcaacactttgtataaattgatttttttattgattcgtggaatcttccagaaagatgtcgagcgtttgcagtgataagtcgtcgtcgacgccggcggtaaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgcaggatgaaggttatgcctctgcagatgacgcggttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcaaaaagttggaaaaggagactggagaggaatctctcgtaacttcgtaaagactcgcacaccgacacaggttgcaagtcatgctcagaaatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72168" stop="70591"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71868" g_stop="71467" g_length="402"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="402" r_length="402" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70891" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="542" r_length="140" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E253880" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E253880" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71868" e_stop="71467"/>
          <exon e_start="71030" e_stop="70891"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATAC</genome_strand>
        <mrna_strand>TTCTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E562943" ref_strand="+" ref_description="SGN-E562943 [1660]">
      <seq>ctttcttcctttcaatttcaatttcaataggtgtgtacggtttccgtttgacggaagtgtatgtttagtcatcaccactttgtatcaattgattttttattgattcgtggaaacttccagaacgatgtcgagcgtttacagcgataagtcgtcgtcgacgccggcagttaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcatccgaatgctaacaacaacaacaacggcggtgataacaatgaatcctctaaagtggctcaggatgaaggttatgcctctgcagatgacgctgttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtgggaccagaggaagagcatcacgttattccttttaggattgcagaaagtgggaacaaggagactggagaggaatctctcggtaacttcgtagagactcgcacacgactcagttgcaagtcatgctcagaaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72169" stop="70592"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71861" g_stop="71467" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="404" r_length="389" r_score="0.942"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.964" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70892" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="546" r_length="142" r_score="0.878"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E562943" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E562943" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71861" e_stop="71467"/>
          <exon e_start="71030" e_stop="70892"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGAC-GAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGT-GGA-CAGAGGAAGAGCAT-AAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAA-AAGGAGACTGGAGAGGAATCTCTC-GTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATA</genome_strand>
        <mrna_strand>TTTCAATTTCAATAGGTGTGTACGGTTTCCGTTTGACGGAAGTGTATGTTTAGTCATCACCACTTTGTATCAATTGA-TTTTTTATTGATTCGTGGAAACTTCCAGAACGATGTCGAGCGTTTACAGCGATAAGTCGTCGTCGACGCCGGCAGTTACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCATCCGAATGCT---AACAACAACAACAA---CGGCGGTGATAACAATGAATCCTCTAAAGTGGCTCAGGATGAAGGTTATGCCTCTGCAGATGACGCTGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGGACCAGAGGAAGAGCATCACGTTATTCCTTTTAGGATTGCAGAAAGTGGGAACAAGGAGACTGGAGAGGAATCTCTCGGTAACTTCGTAGAGACTCGCACA-CGACTCA-GTTGCAAGTCATGCTCAGAAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E306754" ref_strand="+" ref_description="SGN-E306754 [cLEY-19-L5]">
      <seq>tttttcttcctttcaatttcaataggtgtgtacggttgtcaattgacgaagtgtatgtttagtcatcaacactttgtataaattgatttttttattgattcgtggaatcttccagaaagatgtcgagcgtttgcagtgataagtcgtcgtcgacgccggcggtaaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgcaagatgaaggttatgcctctgcagatgacgcggttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaagattgcaaaaagttggaaaaggagactggagaggaatctctcgtaacttcgtgaagactcgcacaccgacacaagttgcaagtca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72171" stop="70604"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71871" g_stop="71467" g_length="405"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="405" r_length="405" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70904" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="532" r_length="127" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E306754" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E306754" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71871" e_stop="71467"/>
          <exon e_start="71030" e_stop="70904"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTCTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCA</genome_strand>
        <mrna_strand>TTTTTCTTCCTTTCAATTTCAATAGGTGTGTACGGTTGTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAAGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAAGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTGAAGACTCGCACACCGACACAAGTTGCAAGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E473523" ref_strand="+" ref_description="SGN-E473523 [cSTB-32-N3]">
      <seq>gtttgacggagtgtatgtttagtcatcgccactttgtatcaattgattttttattgattcgtggaaacttccagaacgatgtcgagcgtttgcagcgataagtcgtcatcgacgccggcagttaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcatccgaatgctaacaacaacaacaacggcggtgataacaatgaatcctctaaagtggctcaggatgaaggttatgcctctgcagatgacgctgttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcagaaagtgggaaaaggagactggagaggaatctctcgtaacttcgtcaagactcgcacaccgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72129" stop="70619"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71831" g_stop="71467" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="358" r_length="358" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.964" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70919" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="470" r_length="112" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E473523" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="1.015" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E473523" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71831" e_stop="71467"/>
          <exon e_start="71030" e_stop="70919"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGAC</genome_strand>
        <mrna_strand>GTTTGACGGAGTGTATGTTTAGTCATCGCCACTTTGTATCAATTGA-TTTTTTATTGATTCGTGGAAACTTCCAGAACGATGTCGAGCGTTTGCAGCGATAAGTCGTCATCGACGCCGGCAGTTACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCATCCGAATGCT---AACAACAACAACAA---CGGCGGTGATAACAATGAATCCTCTAAAGTGGCTCAGGATGAAGGTTATGCCTCTGCAGATGACGCTGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAGAAAGTGGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTCAAGACTCGCACACCGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E207768" ref_strand="+" ref_description="SGN-E207768 [cLEC-32-K6]">
      <seq>ttcgggtttttcttcctttcaatttcaataggtgtgtacggttttcaattgacgaagtgtatgtttagtcatcaacactttgtataaattgatttttttattgattcgtggaatcttccagaaagatgtcgagcgtttgcagtgataagtcgtcgtcgacgccggcggtaaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgcaggatgaaggttatgcctctgcagatgacgcggttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttaggattgcaaaaagttggaaaaggagactggagaggaatctctcgtaacttcgtaaagac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72177" stop="70631"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71877" g_stop="71467" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="411" r_length="411" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70931" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="412" r_stop="511" r_length="100" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E207768" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E207768" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71877" e_stop="71467"/>
          <exon e_start="71030" e_stop="70931"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGGGTTTTTCTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGAC</genome_strand>
        <mrna_strand>TTCGGGTTTTTCTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E250383" ref_strand="+" ref_description="SGN-E250383 [cLEG-6-G4]">
      <seq>tttttcttcctttcaatttcaataggtgtgtacggttttcaattgacgaagtgtatgtttagtcatcaacactttgtataaattgatttttttattgattcgtggaatcttccagaaagatgtcgagcgtttgcagtgataagtcgtcgtcgacgccggcggtaaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgcacgatgaagggttaaatttgcgctctgcagatgacgcggttcaacatcagtccaacagtggtcgcgagcgtcagagaggagttccgtggacagaggaagagcataagttattccttttacgattgcgaaaagttggaaaaggagactggagaggaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72171" stop="70651"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71871" g_stop="71467" g_length="405"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="411" r_length="411" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.964" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70951" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="412" r_stop="491" r_length="80" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E250383" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>485</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E250383" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71871" e_stop="71467"/>
          <exon e_start="71030" e_stop="70951"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTCTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAA-GGTT--A--TGC-CTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATC</genome_strand>
        <mrna_strand>TTTTTCTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCACGATGAAGGGTTAAATTTGCGCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTCAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTACGATTGCGAAAAGTTGGAAAAGGAGACTGGAGAGGAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E265256" ref_strand="+" ref_description="SGN-E265256 [cLEI-9-K11]">
      <seq>acaacggcggcggtgataacaatgaatcctctaaagtggcgcaggatgaaggtatgcctctgcgatgacgcggttcaacatcagtccaacagtggtcgaagcgtaataaggagttccgtggacagaggaagagcataattattccttttaggattgcaaagttggaaaaggagactggagaggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71880" stop="70653"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71580" g_stop="71467" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="0.947"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="0.90"/>
            <acceptor a_prob="0.964" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70953" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="185" r_length="75" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E265256" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>192</cumulative_length_of_scored_exons>
        <coverage percentage="1.038" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265256" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71580" e_stop="71467"/>
          <exon e_start="71030" e_stop="70953"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAA</genome_strand>
        <mrna_strand>ACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGG-TATGCCTCTGC-GATGACGCGGTTCAACATCAGTCCAACAGTGGTCG-AAGCGTAATA-AG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAA-TTATTCCTTTTAGGATTGC--AAAGTTGGAAAAGGAGACTGGAGAGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E476652" ref_strand="+" ref_description="SGN-E476652 [cSTB-45-F23]">
      <seq>cttctttcttcctttcaatttcaatttcaatacgtgtgtacggtttccgtttgacggagtgtatgtttagtcatcaccactttgtatcaactgatttttattgattcgtggaaacttccaggaacgatgtcgagcgtttacagcgataagtcgtcgtcgacgccggcagttaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctaaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacggcggtgataacaatgaatcctctaaagaggctcaggatgaaggttatgcctctgcagatgacgctgttcaacatcagtccaacagtggtcgcgagcgtaagagaggagttccgtggacagaggaagagcataagttattccttttcggattgcagaaagtgggaaaaggagact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72171" stop="70662"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71846" g_stop="71467" g_length="380"/>
          <reference_exon_boundary r_type="cDNA" r_start="34" r_stop="406" r_length="373" r_score="0.929"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.964" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70962" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="475" r_length="69" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E476652" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>449</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E476652" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71846" e_stop="71467"/>
          <exon e_start="71030" e_stop="70962"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCA-GAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACT</genome_strand>
        <mrna_strand>GTGTGTACGGTTTCCGTTTGACGGAGTGTATGTTTAGTCATCACCACTTTGTATCAACTGA--TTTTTATTGATTCGTGGAAACTTCCAGGAACGATGTCGAGCGTTTACAGCGATAAGTCGTCGTCGACGCCGGCAGTTACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTAAACGATCTTTCACAGTACGAGCAACCGAATGCT---AACAACAACAACAA---CGGCGGTGATAACAATGAATCCTCTAAAGAGGCTCAGGATGAAGGTTATGCCTCTGCAGATGACGCTGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTCGGATTGCAGAAAGTGGGAAAAGGAGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E450422" ref_strand="+" ref_description="SGN-E450422 [cSTS-9-E24]">
      <seq>cggtttccgtttgacggagtgtatgtttagtcatcaccactttgtatcaattgattttttattgattcggggaaacttccaaaacgatgtcgagcgtttacagcgataagtcgtcgtcaacgccggcagttaccggcggcggttttggaggaaaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctaaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacgggggtgataacaatgaatcctctaaagtggctcaggatgaaggttatgcctctgcagatgacgctgttcaacatcagtccaacagtggtcgcgagcgtaaaagaggagttccgtggacagaggaagagcataagttattccttttaggattgcaaaaagtgggaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72139" stop="70668"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71839" g_stop="71467" g_length="373"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="366" r_length="366" r_score="0.928"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436">
            <donor d_prob="0.987" d_score="0.96"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71030" g_stop="70968" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="429" r_length="63" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E450422" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>436</cumulative_length_of_scored_exons>
        <coverage percentage="1.016" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E450422" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71839" e_stop="71467"/>
          <exon e_start="71030" e_stop="70968"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAGGTGAGATCTCCTGTCCTCTTCTTCTATTTTTTGTTGCTAATCGGCGTGTTTTTATGATCGTCTTCATTTTTCATTCGATTCGGTTATTTCTGTCAGTGCTTAGTCAATTAATGTCTACTCTGAGTGAAGTTTCTATTAGATTCATCGATCGTTTTCTCTGTTATGCACAAATTTTTGAGTTATACTCTTCTATCCTAATTTGTGTTGCACAGAGTCAAATTGATAGTTTTATCACGTGATTTATATGTAATTGTTTGAAATTAATTCCAAAAATGATGGCCGAATTTGTAGAATTTTTTTTGGATTCTGTAGAAGGGAACTCGTTTCCCTCTGTCTAGATTTCAGGACCATAAATATGGTTTTGATCTAACCTGCTTAGCTTTGAATCCATAAAAATTGATTTCTGATGAAGTAGGGTTGATTTTGTTTGTATTAGGAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAG</genome_strand>
        <mrna_strand>CGGTTTCCGTTTGACGGAGTGTATGTTTAGTCATCACCACTTTGTATCAATTGA-TTTTTTATTGATTCGGGGAAACTTCCAAAACGATGTCGAGCGTTTACAGCGATAAGTCGTCGTCAACGCCGGCAGTTACCGGCGGCGGTTTTGGAGGAAAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTAAACGATCTTTCACAGTACGAGCAACCGAATGCT---AACAACAACAACAAC-G-GG-GGTGATAACAATGAATCCTCTAAAGTGGCTCAGGATGAAGGTTATGCCTCTGCAGATGACGCTGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAAAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTGGGAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E697373" ref_strand="+" ref_description="SGN-E697373 [FA02CE11]">
      <seq>ccgtttcaatttcaataggtgtgtacggttttcaattgacgaagtgtatgtttagtcatcaacactttgtataaattgatttttttattgattcgcggaatcttccagaaagatgtcgagcgtttgcagtgataagtcgtcgtcgacgccggcggtaaccggcggcggctttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgacgaagagcgtgagtctgaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgcatcgatgaaggttatgcctctgcagatgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72163" stop="71210"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71864" g_stop="71510" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="356" r_length="356" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E697373" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>355</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E697373" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71864" e_stop="71510"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCA-GGATGAAGGTTATGCCTCTGCAGATGAC</genome_strand>
        <mrna_strand>CCGTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGCGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGCTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGACGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCATCGATGAAGGTTATGCCTCTGCAGATGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E463973" ref_strand="+" ref_description="SGN-E463973 [cPRO-16-F11]">
      <seq>cttctttcttcctttcaatttcaatttcaataggtgtgtacggtttccgtttgacggagtgtatgtttagtcatcgccactttgtatcaattgattttttattgattcgtggaaacttccagaacgatgtcgagcgtttgcagcgataagtcgtcatcgacgccggcagttaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcatccgaatgctaacaacaacaacaacggcggtgataacaatgaatcctctaaagtggctcaagatgaagggtatgcctctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72171" stop="71218"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71861" g_stop="71518" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="355" r_length="337" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E463973" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>344</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E463973" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71861" e_stop="71518"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTG</genome_strand>
        <mrna_strand>TTTCAATTTCAATAGGTGTGTACGGTTTCCGTTTGACGGAGTGTATGTTTAGTCATCGCCACTTTGTATCAATTGA-TTTTTTATTGATTCGTGGAAACTTCCAGAACGATGTCGAGCGTTTGCAGCGATAAGTCGTCATCGACGCCGGCAGTTACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCATCCGAATGCT---AACAACAACAACAA---CGGCGGTGATAACAATGAATCCTCTAAAGTGGCTCAAGATGAAGGGTATGCCTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E313959" ref_strand="+" ref_description="SGN-E313959 [cTOA-19-C10]">
      <seq>ttcctttcaatttcaataggtgtgtacggttttcaattgacgaagtgtatgtttagtcatcaacactttgtataaattgatttttttattgattcgtggaatcttccagaaagatgtcgagcgtttgcagtgataagtcgtcgtcgacgccggcggtaaccggcggcggttttggaggaaaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcaaccgaatgctaacaacaacaacaacaacggcggcggtgataacaatgaatcctctaaagtggcgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72165" stop="71239"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71865" g_stop="71539" g_length="327"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="327" r_length="327" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E313959" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>327</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E313959" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71865" e_stop="71539"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGC</genome_strand>
        <mrna_strand>TTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAAAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E476061" ref_strand="+" ref_description="SGN-E476061 [cSTB-43-O7]">
      <seq>cttctttcttcctttcaatttcaatttcaataggtgtgtacggtttccgtttgacggagtgtatgtttagtcatcgccactttgtatcaattgattttttattgattcgtggaaacttccagaacgatgtcgagcgtttgcagcgataagtcgtcatcgacgccggcagttaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcatccgaatgctaacaacaacaacaacggcggtgataacaatgaatcctctaaagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72171" stop="71243"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71861" g_stop="71543" g_length="319"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="330" r_length="312" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E476061" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>319</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E476061" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71861" e_stop="71543"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTG</genome_strand>
        <mrna_strand>TTTCAATTTCAATAGGTGTGTACGGTTTCCGTTTGACGGAGTGTATGTTTAGTCATCGCCACTTTGTATCAATTGA-TTTTTTATTGATTCGTGGAAACTTCCAGAACGATGTCGAGCGTTTGCAGCGATAAGTCGTCATCGACGCCGGCAGTTACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCATCCGAATGCT---AACAACAACAACAA---CGGCGGTGATAACAATGAATCCTCTAAAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E291323" ref_strand="+" ref_description="SGN-E291323 [cLET-2-G10]">
      <seq>tttcaatttcaataggtgtgtacggttttcaattgacgaagtgtatgtttagtcatcaacactttgtataaattgatttttttattgattcgtggaatcttccagaaagatgtcgagcgtttgcagtgataagtcgtcgtcgacgccggcggtaaccggcggcggttctggaggctaaatcatgttgtttggtgtgagagccaacgtggatcctatgacgaagagcgtgagtctgaacgatctcttcacagtacgagcacccgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72161" stop="71297"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71861" g_stop="71597" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="266" r_length="266" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E291323" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>265</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E291323" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71861" e_stop="71597"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCT-TTCACAGTACGAGCAACCGAAT</genome_strand>
        <mrna_strand>TTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTCTGGAGGCTAAATCATGTTGTTTGGTGTGAGAGCCAACGTGGATCCTATGACGAAGAGCGTGAGTCTGAACGATCTCTTCACAGTACGAGCACCCGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E584472" ref_strand="+" ref_description="SGN-E584472 [10299]">
      <seq>taggtgtgtacggtttccgtttgacggagtgtatgtttagtcatcaccactttgtatcaattgattttgtattgattcgtggaaacttccagaacgatgtcgagcgtttacagcgataagtcgtcgtcgacgccggcagttaccggcggcggttttggaggagaaatcatgttgtttggtgtgagagtaaaagtggatcctatgaggaagagcgtgagtctgaacgatctttcacagtacgagcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72149" stop="71302"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71849" g_stop="71602" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="247" r_length="247" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E584472" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>248</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E584472" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71849" e_stop="71602"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAAC</genome_strand>
        <mrna_strand>TAGGTGTGTACGGTTTCCGTTTGACGGAGTGTATGTTTAGTCATCACCACTTTGTATCAATTGA-TTTTGTATTGATTCGTGGAAACTTCCAGAACGATGTCGAGCGTTTACAGCGATAAGTCGTCGTCGACGCCGGCAGTTACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E549724" ref_strand="+" ref_description="SGN-E549724 [TUS-6-L3](-)">
      <seq>ccataagagacagtgtaattattcctcgagggcccactatcaccagaattttggttgcttgtctaactggagcccttcctagttcacgactagaaacagtaacttacgctctactggcattgacccgggcatatgggtgaaaagctcttgagtgggcaaaggaatgtgtgtccttaattccatcaacagctgttacagaattggaaaggactaggtttttacaagctttgtctgatgcagcctctggagcaaatatgaacggtctggtagttccgattgacgagatttcagaggtttgccgacgtaatcgaactgttcaggaaatagttcaaggagctttgaggccacttgatctgaacatagtagctgtatcatagtggagagggtgcagaaggacctttttttaacctctcccttctttgcagacagtagtttttcatgattctttggaggccttatttcatcgtttgtccattgtgcggcttggaaatatatactagttatgcagcaaaagggtgttgtattgttgttactttttctacttgtgggaagtgatagaggaactcaaagcagatgcagttcacttggtttggctttttcacttttggtcctttttcgatttgggggggttttctttcgaaggtgaggagtttccagttttgaggtttaatcctggagttcaatgtataagcttcttgtagttggtaacatcttccagtttataactatggatagaatgtgcagttcttcagtcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77089" stop="75625"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76789" g_stop="76692" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76691" i_stop="76586" i_length="106">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76585" g_stop="75930" g_length="656"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="752" r_length="654" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E549724" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>754</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E549724" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76789" e_stop="76692"/>
          <exon e_start="76585" e_stop="75930"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATAAGAGACAGTGTAATTATTCCTCGAGGGCCCACTATCACCAGAATTTTGGTTGCTTGTCTAACTGGAGCCCTTCCTAGTTCACGACTAGAAACAGTAAGTACAAATCATTATTTCTTTTTTATAAAAGGCAGATGGGTGAAGAGAAAGGTAGTAATAGTTTGTTGCATTCAAGAGTTACTCTGAGCTGTTTTCTTTGTAGGTAACTTACGCTCTACTGGCATTGACCCGGGCATATGGGTTGAAAGCTCTTGAGTGGGCAAAGGAATGTGTGTCCTTAATTCCATCAACAGCTGTTACAGAATTGGAAAGGACTAGGTTTTTACAAGCTTTGTCTGATGCAGCCTCTGGAGCAAATATGAACGGTCTGGTAGTTCCGATTGACGAGATTTCAGAGGTTTGCCGACGTAATCGAACTGTTCAGGAAATAGTTCAAGGAGCTTTGAGGCCACTTGATCTGAACATAGTAGCTGTATCATAGTGGAGAGGGTGCAGAAGGACCTTTTTTTAACCTCTCCCTTCTTTGCAGACAGTAGTTTTTCATGATTCTTTGGAGGCCTTATTTCATCGTTTGTCCATTGTGCGGCTTGGAAATATATACTAGTTATGCAGCAAAAGGGTGTTGTATTGTTGTTACTTTTTCTACTTGTGGGAAGTGATAGAGGAACTCAAAGCAGATGCAGTTCACTTGGTTTGGCTTTTTCACTTTTGGTCCTTTTTCGATTTGGGGGGGTTTTCTTTCGAAGGTGAGGAGTTTCCAGTTTTGAGGTTTAATCCTGGAGTTCAATGTATAAGCTTCTTGTATTTGGTAACATCTTCCAGTTTATAACTATGTATAGAATGTGCAGTTTCTTTCAG</genome_strand>
        <mrna_strand>CCATAAGAGACAGTGTAATTATTCCTCGAGGGCCCACTATCACCAGAATTTTGGTTGCTTGTCTAACTGGAGCCCTTCCTAGTTCACGACTAGAAACA..........................................................................................................GTAACTTACGCTCTACTGGCATTGACCCGGGCATATGGGTGAAAAGCTCTTGAGTGGGCAAAGGAATGTGTGTCCTTAATTCCATCAACAGCTGTTACAGAATTGGAAAGGACTAGGTTTTTACAAGCTTTGTCTGATGCAGCCTCTGGAGCAAATATGAACGGTCTGGTAGTTCCGATTGACGAGATTTCAGAGGTTTGCCGACGTAATCGAACTGTTCAGGAAATAGTTCAAGGAGCTTTGAGGCCACTTGATCTGAACATAGTAGCTGTATCATAGTGGAGAGGGTGCAGAAGGACCTTTTTTTAACCTCTCCCTTCTTTGCAGACAGTAGTTTTTCATGATTCTTTGGAGGCCTTATTTCATCGTTTGTCCATTGTGCGGCTTGGAAATATATACTAGTTATGCAGCAAAAGGGTGTTGTATTGTTGTTACTTTTTCTACTTGTGGGAAGTGATAGAGGAACTCAAAGCAGATGCAGTTCACTTGGTTTGGCTTTTTCACTTTTGGTCCTTTTTCGATTTGGGGGGGTTTTCTTTCGAAGGTGAGGAGTTTCCAGTTTTGAGGTTTAATCCTGGAGTTCAATGTATAAGCTTCTTGTAGTTGGTAACATCTTCCAGTTTATAACTATGGATAGAATGTGCAG-TTC-TTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E549746" ref_strand="+" ref_description="SGN-E549746 [TUS-6-L3]">
      <seq>ccataagagacagtgtaattattcctcgagggcccactatcaccagaattttggttgcttgtctaactggagcccttcctagttcacgactagaaacagtaacttacgctctactggcattgacccgggcatatgggttgaaagctcttgagtgggcaaaggaatgtgtgtccttaattccatcaacagctgttacagaattggaaaggactaggtttttacaagctttgtctgatgcagcctctggagcaaatatgaacggtctggtagttccgattgacgagatttcagaggtttgccgacgtaatcgaactgttcaggaaatagttcaaggagctttgaggccacttgatctgaacatagtagctgtatcatagtggagagggtgcagaaggacctttttttaacctctcccttctttgcagacagtagtttttcatgattctttggaggccttatttcatcgtttgtccattgtgcggcttggaaatatatactagttatgcagcaaaagggtgttgtattgttgttactttttctacttgtgggaagtgatagaggaactcaaagcagatgcagttcacttggtttggctttttcacttttggtcctttttcgatttgggggggttttctttcgaaggtgaggagtttcaagttttgaggtttatcctggaggtcaatgtataagcttcttgtatttgggtacatcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77089" stop="75669"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76789" g_stop="76692" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76691" i_stop="76586" i_length="106">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76585" g_stop="75969" g_length="617"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="714" r_length="616" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E549746" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E549746" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76789" e_stop="76692"/>
          <exon e_start="76585" e_stop="75969"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATAAGAGACAGTGTAATTATTCCTCGAGGGCCCACTATCACCAGAATTTTGGTTGCTTGTCTAACTGGAGCCCTTCCTAGTTCACGACTAGAAACAGTAAGTACAAATCATTATTTCTTTTTTATAAAAGGCAGATGGGTGAAGAGAAAGGTAGTAATAGTTTGTTGCATTCAAGAGTTACTCTGAGCTGTTTTCTTTGTAGGTAACTTACGCTCTACTGGCATTGACCCGGGCATATGGGTTGAAAGCTCTTGAGTGGGCAAAGGAATGTGTGTCCTTAATTCCATCAACAGCTGTTACAGAATTGGAAAGGACTAGGTTTTTACAAGCTTTGTCTGATGCAGCCTCTGGAGCAAATATGAACGGTCTGGTAGTTCCGATTGACGAGATTTCAGAGGTTTGCCGACGTAATCGAACTGTTCAGGAAATAGTTCAAGGAGCTTTGAGGCCACTTGATCTGAACATAGTAGCTGTATCATAGTGGAGAGGGTGCAGAAGGACCTTTTTTTAACCTCTCCCTTCTTTGCAGACAGTAGTTTTTCATGATTCTTTGGAGGCCTTATTTCATCGTTTGTCCATTGTGCGGCTTGGAAATATATACTAGTTATGCAGCAAAAGGGTGTTGTATTGTTGTTACTTTTTCTACTTGTGGGAAGTGATAGAGGAACTCAAAGCAGATGCAGTTCACTTGGTTTGGCTTTTTCACTTTTGGTCCTTTTTCGATTTGGGGGGGTTTTCTTTCGAAGGTGAGGAGTTTCCAGTTTTGAGGTTTAATCCTGGAGTTCAATGTATAAGCTTCTTGTATTTGGTAACATCTTC</genome_strand>
        <mrna_strand>CCATAAGAGACAGTGTAATTATTCCTCGAGGGCCCACTATCACCAGAATTTTGGTTGCTTGTCTAACTGGAGCCCTTCCTAGTTCACGACTAGAAACA..........................................................................................................GTAACTTACGCTCTACTGGCATTGACCCGGGCATATGGGTTGAAAGCTCTTGAGTGGGCAAAGGAATGTGTGTCCTTAATTCCATCAACAGCTGTTACAGAATTGGAAAGGACTAGGTTTTTACAAGCTTTGTCTGATGCAGCCTCTGGAGCAAATATGAACGGTCTGGTAGTTCCGATTGACGAGATTTCAGAGGTTTGCCGACGTAATCGAACTGTTCAGGAAATAGTTCAAGGAGCTTTGAGGCCACTTGATCTGAACATAGTAGCTGTATCATAGTGGAGAGGGTGCAGAAGGACCTTTTTTTAACCTCTCCCTTCTTTGCAGACAGTAGTTTTTCATGATTCTTTGGAGGCCTTATTTCATCGTTTGTCCATTGTGCGGCTTGGAAATATATACTAGTTATGCAGCAAAAGGGTGTTGTATTGTTGTTACTTTTTCTACTTGTGGGAAGTGATAGAGGAACTCAAAGCAGATGCAGTTCACTTGGTTTGGCTTTTTCACTTTTGGTCCTTTTTCGATTTGGGGGGGTTTTCTTTCGAAGGTGAGGAGTTTCAAGTTTTGAGGTTT-ATCCTGGAGGTCAATGTATAAGCTTCTTGTATTTGGGTACATCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E699682" ref_strand="+" ref_description="SGN-E699682 [FA10DF04]">
      <seq>cccttcattggtggattgtgccatgatcggcatcaccgtgcagcacagggaggcttgcaattcaatattgaactttgtgtctgatatattcgatctttcgaactctacaaacggggaaagttgcctatccataagagacagtgtaattattcctcgagggcccactatcaccagaattttggttgcttgtctaactggagcccttcctagttcacgactagaaacagtaacttacgctctactggcattgacccgggcatatgggttgaaagctcttgagtgggcaaaggaatgtgtgtccttaattccatcaacagctgttacagaattggaaaggactaggtttttacaagctttgtctgatgcagcctctggagcaaatatgaacggtctggtagttccgattgacgagatttcagaggtttgccgacgtaatcgaactgttcaggaaatagttcaaggagctttgaggccacttgatctgaacatagtagctgtatcatagtggagagggtgcagaaggacctttttttaacctctcccttctttgcagacagtagtttttcatgattctttggaggccttatttcatcgtttgtccattgtgcggcttggaaatatatactagttatgcagcaaaagggtgttgtattgttgttactttttctacttgtgggaagtgatagaggaactcaaagcagatgcagttcacttggtttggctttttcacttttggtcctttttcgatttgggggggttttctttccaaggtgaggagtttccagttttgaggtttaatcctggagttcaatgtata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="79078" stop="75695"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78779" g_stop="78732" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78731" i_stop="76870" i_length="1862">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76869" g_stop="76692" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="226" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76691" i_stop="76586" i_length="106">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="76585" g_stop="75995" g_length="591"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="817" r_length="591" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E699682" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>817</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E699682" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78779" e_stop="78732"/>
          <exon e_start="76869" e_stop="76692"/>
          <exon e_start="76585" e_stop="75995"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCATCATTGGTGGATTGTGCCATGATCGGCATCACCGTGCAGCACAGGTAAATCTCTCTATTTCCTCCTCACCCCATGAACTTATGGCCTGTTTACATCTATTTTGATGTAAAGAGGAAGCTCTGGTTCTACACGGGTAGACTGATGAAGATTTTGTATTCTGGACAATAACATAAAATTGTGAGAAATGTGAGATGAATTGGTTGAATTTGTGAGGTCAAACGTCTTATGGTTGAATCTTGGTAGCGCCAATAATTTATCTCTTCAGCGTAGAATACAATTGTTGAGATATATGCCTTCGTAGGCAGAACTTCAATTTCATCTATAACTTAAATTTTTTTTTATGGAACTATCTGGTAGACCTCAAGCTGCTGGCTGCATGTCATACATGCCATGTCTGTTACAGATGTAATTAATGCAAGGACTGCAACTGAGTTGATGACATCTGTGTGAGCCAATCATTTAATTTTATGAATTTTGTTATAGTGCCTCATGAGAGTATCTTTTCTCTGACAAAACACCAGTAAATTTCGATTACTTGACCTCTTATTATGTAATGGCTTTGGTATAACATAAAATGCAATTTAATTATTTCACACAAGTTGCATCTGACTTTGCTCTGCCAACTTCAATTCTTCTAGTAGTTTGGCAGCATGAGTCCAAGCTGCCGTAATTGTGGTGCTTTGTACACTAGATTTTGCAGTCACATTTTCTTTCTTTCTTTCCTAGGAGAAGTTGCTCCAACTAGAATGCTATACTTGGAATTATAGCGTCCAGCAAAGTTTGTCACCATCCAATCTGCACCGGTCATGTTTGATTCACGTGGAGTAATACTTCATCTGGAGCTTATTATATATGCTGAAGCCTGAAGTATGCATCCTGATGAGTATCACTAGAGAATGAAATTTGTAGTCCTAACTAGAAAGATAATATTAGGTCAGTCATTGTGAGGTAGTCTAGTTTACCAACTTCTTTTTTATCTCCCTGGAACACCAAGAGGCTCCTCTGACCTAGTAGATCGCTAAGGGGACCAAAATCTTATCTCATCATAAATTGATTTTCTTCCCTATGAGTTAGTCTCAATAATACCATGGTTTTTGTGACATTGACACATGTAACTGTCAGAAAAGTGCGGACGAAAAGCATGTAGATAACTATGATCAAGTACCTGAGTGAATGATACAAGAACTGAGTCACGGGACACGGCCAGTTTGATTAGCATGAATTACTTGATGAGACATTAACTGGTCTGATGCTGAAGGAACACATATTCACTATGTTGGTTGTCTATTTTGTTGCATTTCTCAATGCAATATAAGCAGCAGTTTGTTCCACATCAATATGGCGCTATATTTGTTTCCAAAGTCCATTGCCTACAATATGGGTTACAGAGGCCAAGTACCCAAGATATTTAGTAAAAGTATACTTGTAGTTGAATTTTAATATGTCAAGCATAGAATCATCTTTTGATTACCCCCCCCCCCCCCCCGCCCCCCGCTGTTTCAATTTAAGTGTGTCTTAGTTTGATTAGGTACAGAGTTTAAGAAAATTAGGGAAACTTTTGAATCTTGTGTGGCCTAAAACTAAAGACGTGGGTAATGTATCAAGATTTCTTTTGAATCTTGTGATCTTAAACAAACCATGTAAGATGGTGGAATTAGGGAGTTGCCAATGTCATTCTTTCTGAAACATACTAAGACCGAAAGTAAGGCACTTACATTAAAATGGCGGGAGTATATCATTGTCCATTCATCTATCTAATTACTAGAGAACCTATCAGGAACTGCCAGGGAACTCTGGCCCTTTTAGATTTGGATTTCTCCTTCTCTAGTAATTCTATTATCCATTTGGTATGATATTTTATTATGTTTTGATTGTTCTAAATTTCGAAGTATTGACTGGATTGTAGGGAGGCTTGCAATTCAATATTGAACTTTGTGTCTGATATATTCGATCTTTCGAACTCTACAAACGGGGAAAGTTGCCTATCCATAAGAGACAGTGTAATTATTCCTCGAGGGCCCACTATCACCAGAATTTTGGTTGCTTGTCTAACTGGAGCCCTTCCTAGTTCACGACTAGAAACAGTAAGTACAAATCATTATTTCTTTTTTATAAAAGGCAGATGGGTGAAGAGAAAGGTAGTAATAGTTTGTTGCATTCAAGAGTTACTCTGAGCTGTTTTCTTTGTAGGTAACTTACGCTCTACTGGCATTGACCCGGGCATATGGGTTGAAAGCTCTTGAGTGGGCAAAGGAATGTGTGTCCTTAATTCCATCAACAGCTGTTACAGAATTGGAAAGGACTAGGTTTTTACAAGCTTTGTCTGATGCAGCCTCTGGAGCAAATATGAACGGTCTGGTAGTTCCGATTGACGAGATTTCAGAGGTTTGCCGACGTAATCGAACTGTTCAGGAAATAGTTCAAGGAGCTTTGAGGCCACTTGATCTGAACATAGTAGCTGTATCATAGTGGAGAGGGTGCAGAAGGACCTTTTTTTAACCTCTCCCTTCTTTGCAGACAGTAGTTTTTCATGATTCTTTGGAGGCCTTATTTCATCGTTTGTCCATTGTGCGGCTTGGAAATATATACTAGTTATGCAGCAAAAGGGTGTTGTATTGTTGTTACTTTTTCTACTTGTGGGAAGTGATAGAGGAACTCAAAGCAGATGCAGTTCACTTGGTTTGGCTTTTTCACTTTTGGTCCTTTTTCGATTTGGGGGGGTTTTCTTTCGAAGGTGAGGAGTTTCCAGTTTTGAGGTTTAATCCTGGAGTTCAATGTATA</genome_strand>
        <mrna_strand>CCCTTCATTGGTGGATTGTGCCATGATCGGCATCACCGTGCAGCACAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGCTTGCAATTCAATATTGAACTTTGTGTCTGATATATTCGATCTTTCGAACTCTACAAACGGGGAAAGTTGCCTATCCATAAGAGACAGTGTAATTATTCCTCGAGGGCCCACTATCACCAGAATTTTGGTTGCTTGTCTAACTGGAGCCCTTCCTAGTTCACGACTAGAAACA..........................................................................................................GTAACTTACGCTCTACTGGCATTGACCCGGGCATATGGGTTGAAAGCTCTTGAGTGGGCAAAGGAATGTGTGTCCTTAATTCCATCAACAGCTGTTACAGAATTGGAAAGGACTAGGTTTTTACAAGCTTTGTCTGATGCAGCCTCTGGAGCAAATATGAACGGTCTGGTAGTTCCGATTGACGAGATTTCAGAGGTTTGCCGACGTAATCGAACTGTTCAGGAAATAGTTCAAGGAGCTTTGAGGCCACTTGATCTGAACATAGTAGCTGTATCATAGTGGAGAGGGTGCAGAAGGACCTTTTTTTAACCTCTCCCTTCTTTGCAGACAGTAGTTTTTCATGATTCTTTGGAGGCCTTATTTCATCGTTTGTCCATTGTGCGGCTTGGAAATATATACTAGTTATGCAGCAAAAGGGTGTTGTATTGTTGTTACTTTTTCTACTTGTGGGAAGTGATAGAGGAACTCAAAGCAGATGCAGTTCACTTGGTTTGGCTTTTTCACTTTTGGTCCTTTTTCGATTTGGGGGGGTTTTCTTTCCAAGGTGAGGAGTTTCCAGTTTTGAGGTTTAATCCTGGAGTTCAATGTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E246157" ref_strand="+" ref_description="SGN-E246157 [cLEF-40-F7]">
      <seq>cataagagacagtgtaattattcctcgagggcccactatcaccagaattttggttgcttgtctaactggagcccttcctagttcacgactagaaacagtaacttacgctctactggcattgacccgggcatatgggttgaaagctcttgagtgggcaaaggaatgtgtgtccttaattccatcaacagctgttacagaattggaaaggactaggtttttacaagctttgtctgatgcagcctctggagcaaatatgaacggtctggtagttccgattgacgagatttcagaggtttgccgacgtaatcgaactgttcaggaaatagttcaaggagctttgaggccacttgatctgaacatagtagctgtatcatagtggagagggtgcagaaggacctttttttaacctctcccttctttgcagacagtagtttttcatgattctttggaggccttatttcatcgtttgtccattgtgcggcttggaaatatatactagttatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77088" stop="75878"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76788" g_stop="76692" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="97" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76691" i_stop="76586" i_length="106">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76585" g_stop="76178" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="505" r_length="408" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E246157" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246157" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76788" e_stop="76692"/>
          <exon e_start="76585" e_stop="76178"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATAAGAGACAGTGTAATTATTCCTCGAGGGCCCACTATCACCAGAATTTTGGTTGCTTGTCTAACTGGAGCCCTTCCTAGTTCACGACTAGAAACAGTAAGTACAAATCATTATTTCTTTTTTATAAAAGGCAGATGGGTGAAGAGAAAGGTAGTAATAGTTTGTTGCATTCAAGAGTTACTCTGAGCTGTTTTCTTTGTAGGTAACTTACGCTCTACTGGCATTGACCCGGGCATATGGGTTGAAAGCTCTTGAGTGGGCAAAGGAATGTGTGTCCTTAATTCCATCAACAGCTGTTACAGAATTGGAAAGGACTAGGTTTTTACAAGCTTTGTCTGATGCAGCCTCTGGAGCAAATATGAACGGTCTGGTAGTTCCGATTGACGAGATTTCAGAGGTTTGCCGACGTAATCGAACTGTTCAGGAAATAGTTCAAGGAGCTTTGAGGCCACTTGATCTGAACATAGTAGCTGTATCATAGTGGAGAGGGTGCAGAAGGACCTTTTTTTAACCTCTCCCTTCTTTGCAGACAGTAGTTTTTCATGATTCTTTGGAGGCCTTATTTCATCGTTTGTCCATTGTGCGGCTTGGAAATATATACTAGTTATGC</genome_strand>
        <mrna_strand>CATAAGAGACAGTGTAATTATTCCTCGAGGGCCCACTATCACCAGAATTTTGGTTGCTTGTCTAACTGGAGCCCTTCCTAGTTCACGACTAGAAACA..........................................................................................................GTAACTTACGCTCTACTGGCATTGACCCGGGCATATGGGTTGAAAGCTCTTGAGTGGGCAAAGGAATGTGTGTCCTTAATTCCATCAACAGCTGTTACAGAATTGGAAAGGACTAGGTTTTTACAAGCTTTGTCTGATGCAGCCTCTGGAGCAAATATGAACGGTCTGGTAGTTCCGATTGACGAGATTTCAGAGGTTTGCCGACGTAATCGAACTGTTCAGGAAATAGTTCAAGGAGCTTTGAGGCCACTTGATCTGAACATAGTAGCTGTATCATAGTGGAGAGGGTGCAGAAGGACCTTTTTTTAACCTCTCCCTTCTTTGCAGACAGTAGTTTTTCATGATTCTTTGGAGGCCTTATTTCATCGTTTGTCCATTGTGCGGCTTGGAAATATATACTAGTTATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E568618" ref_strand="+" ref_description="SGN-E568618 [12928]">
      <seq>aagatgtatccgatactgtctcaactattttttccctctactgtgtttccatcattggtggattgtgccatgatcggatcaccgtgcagcacaggggaggcttgcaattcaatattgaactttgtatctgatatattcgatcttgcaaactctacaaacggagaaagttgcctatccataagggacagtgtaattattcctcgagggcccactatcaccagaattttggttgcttgtctaactggagcccttcctagttcacgactagaaacagtaacttacgctctactggcattgacccgggcttatgggttgaaagctcttgagtgggcaaaggaatgtgtgtccttaattccatcaacagctgttacagaattggaaaggacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="79127" stop="76171"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78827" g_stop="78732" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78731" i_stop="76870" i_length="1862">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.971" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76869" g_stop="76692" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="273" r_length="179" r_score="0.961"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76691" i_stop="76586" i_length="106">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="76585" g_stop="76471" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="388" r_length="115" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E568618" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>389</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E568618" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78827" e_stop="78732"/>
          <exon e_start="76869" e_stop="76692"/>
          <exon e_start="76585" e_stop="76471"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATGTATCCGATACTGTCCTCAACTATTTTTTCCCTCTACTGTGTTTCCATCATTGGTGGATTGTGCCATGATCGGCATCACCGTGCAGCACAGGTAAATCTCTCTATTTCCTCCTCACCCCATGAACTTATGGCCTGTTTACATCTATTTTGATGTAAAGAGGAAGCTCTGGTTCTACACGGGTAGACTGATGAAGATTTTGTATTCTGGACAATAACATAAAATTGTGAGAAATGTGAGATGAATTGGTTGAATTTGTGAGGTCAAACGTCTTATGGTTGAATCTTGGTAGCGCCAATAATTTATCTCTTCAGCGTAGAATACAATTGTTGAGATATATGCCTTCGTAGGCAGAACTTCAATTTCATCTATAACTTAAATTTTTTTTTATGGAACTATCTGGTAGACCTCAAGCTGCTGGCTGCATGTCATACATGCCATGTCTGTTACAGATGTAATTAATGCAAGGACTGCAACTGAGTTGATGACATCTGTGTGAGCCAATCATTTAATTTTATGAATTTTGTTATAGTGCCTCATGAGAGTATCTTTTCTCTGACAAAACACCAGTAAATTTCGATTACTTGACCTCTTATTATGTAATGGCTTTGGTATAACATAAAATGCAATTTAATTATTTCACACAAGTTGCATCTGACTTTGCTCTGCCAACTTCAATTCTTCTAGTAGTTTGGCAGCATGAGTCCAAGCTGCCGTAATTGTGGTGCTTTGTACACTAGATTTTGCAGTCACATTTTCTTTCTTTCTTTCCTAGGAGAAGTTGCTCCAACTAGAATGCTATACTTGGAATTATAGCGTCCAGCAAAGTTTGTCACCATCCAATCTGCACCGGTCATGTTTGATTCACGTGGAGTAATACTTCATCTGGAGCTTATTATATATGCTGAAGCCTGAAGTATGCATCCTGATGAGTATCACTAGAGAATGAAATTTGTAGTCCTAACTAGAAAGATAATATTAGGTCAGTCATTGTGAGGTAGTCTAGTTTACCAACTTCTTTTTTATCTCCCTGGAACACCAAGAGGCTCCTCTGACCTAGTAGATCGCTAAGGGGACCAAAATCTTATCTCATCATAAATTGATTTTCTTCCCTATGAGTTAGTCTCAATAATACCATGGTTTTTGTGACATTGACACATGTAACTGTCAGAAAAGTGCGGACGAAAAGCATGTAGATAACTATGATCAAGTACCTGAGTGAATGATACAAGAACTGAGTCACGGGACACGGCCAGTTTGATTAGCATGAATTACTTGATGAGACATTAACTGGTCTGATGCTGAAGGAACACATATTCACTATGTTGGTTGTCTATTTTGTTGCATTTCTCAATGCAATATAAGCAGCAGTTTGTTCCACATCAATATGGCGCTATATTTGTTTCCAAAGTCCATTGCCTACAATATGGGTTACAGAGGCCAAGTACCCAAGATATTTAGTAAAAGTATACTTGTAGTTGAATTTTAATATGTCAAGCATAGAATCATCTTTTGATTACCCCCCCCCCCCCCCCGCCCCCCGCTGTTTCAATTTAAGTGTGTCTTAGTTTGATTAGGTACAGAGTTTAAGAAAATTAGGGAAACTTTTGAATCTTGTGTGGCCTAAAACTAAAGACGTGGGTAATGTATCAAGATTTCTTTTGAATCTTGTGATCTTAAACAAACCATGTAAGATGGTGGAATTAGGGAGTTGCCAATGTCATTCTTTCTGAAACATACTAAGACCGAAAGTAAGGCACTTACATTAAAATGGCGGGAGTATATCATTGTCCATTCATCTATCTAATTACTAGAGAACCTATCAGGAACTGCCAGGGAACTCTGGCCCTTTTAGATTTGGATTTCTCCTTCTCTAGTAATTCTATTATCCATTTGGTATGATATTTTATTATGTTTTGATTGTTCTAAATTTCGAAGTATTGACTGGATTGTAG-GGAGGCTTGCAATTCAATATTGAACTTTGTGTCTGATATATTCGATCTTTCGAACTCTACAAACGGGGAAAGTTGCCTATCCATAAGAGACAGTGTAATTATTCCTCGAGGGCCCACTATCACCAGAATTTTGGTTGCTTGTCTAACTGGAGCCCTTCCTAGTTCACGACTAGAAACAGTAAGTACAAATCATTATTTCTTTTTTATAAAAGGCAGATGGGTGAAGAGAAAGGTAGTAATAGTTTGTTGCATTCAAGAGTTACTCTGAGCTGTTTTCTTTGTAGGTAACTTACGCTCTACTGGCATTGACCCGGGCATATGGGTTGAAAGCTCTTGAGTGGGCAAAGGAATGTGTGTCCTTAATTCCATCAACAGCTGTTACAGAATTGGAAAGGACTA</genome_strand>
        <mrna_strand>AAGATGTATCCGATACTGT-CTCAACTATTTTTTCCCTCTACTGTGTTTCCATCATTGGTGGATTGTGCCATGATCGG-ATCACCGTGCAGCACAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAGGCTTGCAATTCAATATTGAACTTTGTATCTGATATATTCGATCTTGCAAACTCTACAAACGGAGAAAGTTGCCTATCCATAAGGGACAGTGTAATTATTCCTCGAGGGCCCACTATCACCAGAATTTTGGTTGCTTGTCTAACTGGAGCCCTTCCTAGTTCACGACTAGAAACA..........................................................................................................GTAACTTACGCTCTACTGGCATTGACCCGGGCTTATGGGTTGAAAGCTCTTGAGTGGGCAAAGGAATGTGTGTCCTTAATTCCATCAACAGCTGTTACAGAATTGGAAAGGACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E259070" ref_strand="+" ref_description="SGN-E259070 [cLEG-41-I18]">
      <seq>gaggaaatacaaggactatatggacaacaccatcagccgtgtttgctttatctctctagtgaagtcattaagatatttggttcagatccatcctgtgcaaattacttgaaagttctcattgagtctctctttagccatacagcatgtcttcttacaaagattcacgatttcacttgccgtccggatatagcaaatgagtgggttttgctggcatcaagatgtatccaatactgatctcaactattgtttccctctactgtgtccccatcattggtggattgtgccatgatcggcatcaccgtgcatcacacggaggcttgcaattcaatattgaactttgtgtctgatatattcgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="79496" stop="76523"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79196" g_stop="79125" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="72" r_length="72" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79124" i_stop="79041" i_length="84">
            <donor d_prob="0.866" d_score="0.98"/>
            <acceptor a_prob="0.199" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79040" g_stop="78948" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="73" r_stop="165" r_length="93" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="78947" i_stop="78878" i_length="70">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.156" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78877" g_stop="78732" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="311" r_length="146" r_score="0.911"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78731" i_stop="76870" i_length="1862">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="76869" g_stop="76823" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="358" r_length="47" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E259070" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>358</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E259070" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79196" e_stop="79125"/>
          <exon e_start="79040" e_stop="78948"/>
          <exon e_start="78877" e_stop="78732"/>
          <exon e_start="76869" e_stop="76823"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGAAATACAAGGACTATATGGACAACACCATCAGCCGTGTTTTCTTTATCTCTCTAGTGAAGTCATTAAGGTATTTGAGTTCTTTCTTGCATTGCAAAATTTTAACCAAATTTGCAGTTTCCATTTTAAGCAACAGTTGGACCTTCTGCCGCAGATATTTGGTTCAGATCCATCCTGTGCAAATTACTTGAAAGTTCTCATTGAGTCTCTCTTTAGCCATACAGCATGTCTTCTTACAAAGATTCAGGTACAGTCTGTTGCTTTATTTTGCATTTCACCGCTAGTTATGTAAGCTAACTCCGAAGTGTGGTTCACAGGATTTCACTTCCCGTCCGGATATAGCAGATGATTGTTTTTTGCTGGCATCAAGATGTATCCGATACTGTCCTCAACTATTTTTTCCCTCTACTGTGTTTCCATCATTGGTGGATTGTGCCATGATCGGCATCACCGTGCAGCACAGGTAAATCTCTCTATTTCCTCCTCACCCCATGAACTTATGGCCTGTTTACATCTATTTTGATGTAAAGAGGAAGCTCTGGTTCTACACGGGTAGACTGATGAAGATTTTGTATTCTGGACAATAACATAAAATTGTGAGAAATGTGAGATGAATTGGTTGAATTTGTGAGGTCAAACGTCTTATGGTTGAATCTTGGTAGCGCCAATAATTTATCTCTTCAGCGTAGAATACAATTGTTGAGATATATGCCTTCGTAGGCAGAACTTCAATTTCATCTATAACTTAAATTTTTTTTTATGGAACTATCTGGTAGACCTCAAGCTGCTGGCTGCATGTCATACATGCCATGTCTGTTACAGATGTAATTAATGCAAGGACTGCAACTGAGTTGATGACATCTGTGTGAGCCAATCATTTAATTTTATGAATTTTGTTATAGTGCCTCATGAGAGTATCTTTTCTCTGACAAAACACCAGTAAATTTCGATTACTTGACCTCTTATTATGTAATGGCTTTGGTATAACATAAAATGCAATTTAATTATTTCACACAAGTTGCATCTGACTTTGCTCTGCCAACTTCAATTCTTCTAGTAGTTTGGCAGCATGAGTCCAAGCTGCCGTAATTGTGGTGCTTTGTACACTAGATTTTGCAGTCACATTTTCTTTCTTTCTTTCCTAGGAGAAGTTGCTCCAACTAGAATGCTATACTTGGAATTATAGCGTCCAGCAAAGTTTGTCACCATCCAATCTGCACCGGTCATGTTTGATTCACGTGGAGTAATACTTCATCTGGAGCTTATTATATATGCTGAAGCCTGAAGTATGCATCCTGATGAGTATCACTAGAGAATGAAATTTGTAGTCCTAACTAGAAAGATAATATTAGGTCAGTCATTGTGAGGTAGTCTAGTTTACCAACTTCTTTTTTATCTCCCTGGAACACCAAGAGGCTCCTCTGACCTAGTAGATCGCTAAGGGGACCAAAATCTTATCTCATCATAAATTGATTTTCTTCCCTATGAGTTAGTCTCAATAATACCATGGTTTTTGTGACATTGACACATGTAACTGTCAGAAAAGTGCGGACGAAAAGCATGTAGATAACTATGATCAAGTACCTGAGTGAATGATACAAGAACTGAGTCACGGGACACGGCCAGTTTGATTAGCATGAATTACTTGATGAGACATTAACTGGTCTGATGCTGAAGGAACACATATTCACTATGTTGGTTGTCTATTTTGTTGCATTTCTCAATGCAATATAAGCAGCAGTTTGTTCCACATCAATATGGCGCTATATTTGTTTCCAAAGTCCATTGCCTACAATATGGGTTACAGAGGCCAAGTACCCAAGATATTTAGTAAAAGTATACTTGTAGTTGAATTTTAATATGTCAAGCATAGAATCATCTTTTGATTACCCCCCCCCCCCCCCCGCCCCCCGCTGTTTCAATTTAAGTGTGTCTTAGTTTGATTAGGTACAGAGTTTAAGAAAATTAGGGAAACTTTTGAATCTTGTGTGGCCTAAAACTAAAGACGTGGGTAATGTATCAAGATTTCTTTTGAATCTTGTGATCTTAAACAAACCATGTAAGATGGTGGAATTAGGGAGTTGCCAATGTCATTCTTTCTGAAACATACTAAGACCGAAAGTAAGGCACTTACATTAAAATGGCGGGAGTATATCATTGTCCATTCATCTATCTAATTACTAGAGAACCTATCAGGAACTGCCAGGGAACTCTGGCCCTTTTAGATTTGGATTTCTCCTTCTCTAGTAATTCTATTATCCATTTGGTATGATATTTTATTATGTTTTGATTGTTCTAAATTTCGAAGTATTGACTGGATTGTAGGGAGGCTTGCAATTCAATATTGAACTTTGTGTCTGATATATTCGATC</genome_strand>
        <mrna_strand>GAGGAAATACAAGGACTATATGGACAACACCATCAGCCGTGTTTGCTTTATCTCTCTAGTGAAGTCATTAAG....................................................................................ATATTTGGTTCAGATCCATCCTGTGCAAATTACTTGAAAGTTCTCATTGAGTCTCTCTTTAGCCATACAGCATGTCTTCTTACAAAGATTCAC......................................................................GATTTCACTTGCCGTCCGGATATAGCAAATGAGTGGGTTTTGCTGGCATCAAGATGTATCCAATACTGATCTCAACTATTGTTTCCCTCTACTGTGTCCCCATCATTGGTGGATTGTGCCATGATCGGCATCACCGTGCATCACAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGCTTGCAATTCAATATTGAACTTTGTGTCTGATATATTCGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E709724" ref_strand="+" ref_description="SGN-E709724 [FA52DG08]">
      <seq>acaatcggagcgtattcaaagtggcttgatgcttcatcaaatggattttcacatttgcccacactcattgatattcttgtgagaggcatgagcacgtgtgaagattccgcagctgcagctgctttagctttcagacacatatgcaatgattgcaagaagaagctttgtgggtcactagatggtctgtttcaaatttaccaaacggcagtcattggggaaggtcccttcaaagtttccgcggaagattcgttgcatctggttgaagctttaagtatggttattacagagcttccttcggaacatgctaagaaggcacttgaggcagtatgcctgccatctgttgctcagttacaagagatgatcaatcaaggtccccaagttttggggcaaaaaaatgctcgggaattaactgttcattttgatcgacttcaaatatatttagatatgtaaatcacccagaagcggttgcagatgcaattcaaaaactttggccaatattcaaagccatttttgatgttcgtgcttgggacatgcggacgatggagtctctttgccgggcttgtaaaaatgctgtacgaacttctaagaggctcatgggggttacaattggggcgatgctggaggaaatacaaggactatatggacaacaccatcagccgtgttttctttatctctctagtgaagtcattaagatatttggttcagatccatcctgtgcaaattacttgaaagttctcattgagtctctctttagccatacagcatgtcttcttacaaagattcaggatttcccttcccgtccggatatagcagatgattgttttttgctggcatcaagatgtatccgataatgtcctcaactattttttccctccactggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="-" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="82335" stop="78482"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82035" g_stop="81888" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="148" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81887" i_stop="80457" i_length="1431">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.915" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80456" g_stop="80333" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="272" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80332" i_stop="80210" i_length="123">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80209" g_stop="80128" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="354" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80127" i_stop="80056" i_length="72">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.948" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="80055" g_stop="79967" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="442" r_length="88" r_score="0.989"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="79966" i_stop="79886" i_length="81">
            <donor d_prob="0.982" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="79885" g_stop="79811" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="517" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="79810" i_stop="79720" i_length="91">
            <donor d_prob="0.830" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="79719" g_stop="79665" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="518" r_stop="572" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="79664" i_stop="79245" i_length="420">
            <donor d_prob="0.377" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="79244" g_stop="79125" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="573" r_stop="692" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="79124" i_stop="79041" i_length="84">
            <donor d_prob="0.866" d_score="1.00"/>
            <acceptor a_prob="0.199" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="79040" g_stop="78948" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="693" r_stop="785" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="78947" i_stop="78878" i_length="70">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.156" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="78877" g_stop="78782" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="786" r_stop="881" r_length="96" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="-" ref_id="SGN-E709724" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>882</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E709724" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82035" e_stop="81888"/>
          <exon e_start="80456" e_stop="80333"/>
          <exon e_start="80209" e_stop="80128"/>
          <exon e_start="80055" e_stop="79967"/>
          <exon e_start="79885" e_stop="79811"/>
          <exon e_start="79719" e_stop="79665"/>
          <exon e_start="79244" e_stop="79125"/>
          <exon e_start="79040" e_stop="78948"/>
          <exon e_start="78877" e_stop="78782"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAATCGGAGCGTATTCAAAGTGGCTTGATGCTTCATCAAATGGATTTTCACATTTGCCCACACTCATTGATATTCTTGTGAGAGGCATGAGCACGTGTGAAGATTCCGCAGCTGCAGCTGCTTTAGCTTTCAGACACATATGCAATGGTAAATACTTCGTTCAGTTTCTCATGTTTGTATTTATTTTTCTTTTAGTGTTACTTGTAGTAATTCTGCCTTTTATCCAAAAAAAAATTGATACTCCACCCTTTTTGTTAAAGAACTGATTATTTTTCTATGATCATTCTATTTTATTTATTTTCAAGAGATCTCTAATATTTGATAATTGATGAAAGTTTACCACTTCATGGTTGGGCTTTGTCAACGATATAATTAATATCTGTGAGACTAGTTGGTGGATTATGATACACCTCTTGTTTCAAATTCACATCCAGTTTATCTGTGGCAGCTATTTCATAAAGACAACTTGGAAAAGAGCCAAAAATATCTCTATCCTAGGGAAAAAGGCTCAACAACACCATCCATCCACCTTTTGATCTGAATTACCCCCAATCTATTTTTTTCTATTTTGTTCGGACTCTTCAAAAATATCAATGGGAGCGTGTCAGATGTTCTAAAAGTAGTGTGTTTTTGGTAAATCCGACAAGGGTGCAGCATCGAAAGTGAAGAGTCCGTGCAACTTATATTTTATATTAAAATACCTCAAACTAAAACCTTAAACTTGATTGTTTTTCCTAATTTTTTTTAAAAAGCCATGTGATCTATTTTGATTGACCAAAATATTACTTATTTCAAAAATTAATCCCACCCATTTCGTTAATCTAAACTTGCCCCAAATAATCTGGTTCGTTCTTTATAATCTAAAATCACCCGCTGATATTTTTATTCCACCCATTTAAACTCTTGTAAATATTCTATAGAAGCCACAAAGTCTTGCAACTCTGAATCTCTCTCCTAGCCAGGTGATTGAGCCTCTGTTTTCCCCTCTTGGATCCCCAACTCAAGCTATCCAACAACTTGGAACTGAATTGTTATCTCATCTCTTTGCACATGAGCATTTTAAGCAGGATACAAACAAGAAAAGCAGTAGTGTCTCTTGTGCAGCTAGCAGGCATTGGTATTTTGAACTTGCAACAGACATCAATTAGGGTCAGATTATTAGGCGCGAGTTTGAATTAAAAAAATGGGTGGCTTTAATTTTTAAATAAAGTAATGTAAGTGGCCAATCAAAATAGCCATGTGGCTTTTTTAAAAACTAGTAAAAATCATCAAGTTTAAGGTGTTAGTTTAGGGGTATTCTTGAGCAAAAAAAAAACATATAGGTTGAGGGTATTTTTAGACCAAAAGGTGGATGAAGGGTATTGATGAGCCATTTTCCATAGGATAGAGGTATTTTTGGCCCTTTTCTGAATAGAATTTTAGGATCAATTTTTTCTTAACTTTGCGAAATTGTATCTTGGTTACTCAGTCCATCTGAAATGACCTGGTGAATTTGCTCCTTCTCAGAGTTAAACATTCTGGCCAGAGTTAATAGTTCTTTAGTTCAATCTCGTTTCAATCTTTTTACTGTCATTGTAGATTGCAAGAAGAAGCTTTGTGGGTCACTAGATGGTCTGTTTCAAATTTACCAAACGGCAGTCATTGGGGAAGGTCCCTTCAAAGTTTCCGCGGAAGATTCGTTGCATCTGGTTGAAGCTTTAAGGTATTATCTAATGCTTAGAAGCTGATCCCTAAGTTAGTTAAGTTCTTTATCTTGTTAAATCCTTACTCTCACCACCCACTTTCCAAGTAAACACACTGGTCTTTTTTCTTCTTTTTTTTGCAGTATGGTTATTACAGAGCTTCCTTCGGAACATGCTAAGAAGGCACTTGAGGCAGTATGCCTGCCATCTGTTGCTCAGTTACAAGTAAGTTTCCTTTCTAAAATTTTATGAATAACTTTAAGTATCAATTTACAAATACTTGGAGTTAACTTCCAGGAGATGATCAATCAAGGTCCCCAAGTTTTGGGGCAAAAAAATGCTCGGGAATTAACTGTTCATTTTGATCGACTTGCAAATATATTTAGGTACAGGAAATTTCCTTGTTCCGTCTTTCATCTATTTGCTTCTATTTGCATTGTCAATTTTGGGACTGAAACCATTTGCAGATATGTAAATCACCCAGAAGCGGTTGCAGATGCAATTCAAAAACTTTGGCCAATATTCAAAGCCATTTTTGATGTGTAAGAAAGCTGTATGCTGTAAATATTGCTTTTAGGATAACTCTTTGATTATAAATTTCCCTAATGGTATTGTTTGATGATATTCACATAGTCGTGCTTGGGACATGCGGACGATGGAGTCTCTTTGCCGGGCTTGTAAAAATGCTGTAAGTTCAGTTATCTATGCCATCCCCTGCCAAGGGATCCAGGAAATCATTCATCAAGCTTCCTATTCCTGAAAAATGTTGTAGTGACACAACTTCTCCTGTAAATATGTGGCGTTTTTCATAGTCCTTCGAATACTTCGTGTTCTTCTCTTCTTTATTCTTGTGCCTCTTGACATCTACATCCGGAGCTGATTTTTTTTCTTCTTTCTGTGAATTTCTGCTGACTTATGTTGCTTAACGTATGACCTCAAACTGCTTTTATGTTACTCTTTGAAATTGTGATTGATAATGTTCTCTACAGCTTATTTAAAGTGGTGTGTTCTGAACTCTGAAGACAAGTATCATCAAGATTCTAGTCTGAGCCCGACAATGAGCAAATGGTATTATGACTTTCCTAACTATGATGATTTCATCCATTAGGTACGAACTTCTAAGAGGCTCATGGGGGTTACAATTGGGGCGATGCTGGAGGAAATACAAGGACTATATGGACAACACCATCAGCCGTGTTTTCTTTATCTCTCTAGTGAAGTCATTAAGGTATTTGAGTTCTTTCTTGCATTGCAAAATTTTAACCAAATTTGCAGTTTCCATTTTAAGCAACAGTTGGACCTTCTGCCGCAGATATTTGGTTCAGATCCATCCTGTGCAAATTACTTGAAAGTTCTCATTGAGTCTCTCTTTAGCCATACAGCATGTCTTCTTACAAAGATTCAGGTACAGTCTGTTGCTTTATTTTGCATTTCACCGCTAGTTATGTAAGCTAACTCCGAAGTGTGGTTCACAGGATTTCACTTCCCGTCCGGATATAGCAGATGATTGTTTTTTGCTGGCATCAAGATGTATCCGATACTGTCCTCAACTATTTTTTCCCTCTACTGTG</genome_strand>
        <mrna_strand>ACAATCGGAGCGTATTCAAAGTGGCTTGATGCTTCATCAAATGGATTTTCACATTTGCCCACACTCATTGATATTCTTGTGAGAGGCATGAGCACGTGTGAAGATTCCGCAGCTGCAGCTGCTTTAGCTTTCAGACACATATGCAATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAGAAGAAGCTTTGTGGGTCACTAGATGGTCTGTTTCAAATTTACCAAACGGCAGTCATTGGGGAAGGTCCCTTCAAAGTTTCCGCGGAAGATTCGTTGCATCTGGTTGAAGCTTTAAG...........................................................................................................................TATGGTTATTACAGAGCTTCCTTCGGAACATGCTAAGAAGGCACTTGAGGCAGTATGCCTGCCATCTGTTGCTCAGTTACAA........................................................................GAGATGATCAATCAAGGTCCCCAAGTTTTGGGGCAAAAAAATGCTCGGGAATTAACTGTTCATTTTGATCGACTT-CAAATATATTTAG.................................................................................ATATGTAAATCACCCAGAAGCGGTTGCAGATGCAATTCAAAAACTTTGGCCAATATTCAAAGCCATTTTTGATGT...........................................................................................TCGTGCTTGGGACATGCGGACGATGGAGTCTCTTTGCCGGGCTTGTAAAAATGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGAACTTCTAAGAGGCTCATGGGGGTTACAATTGGGGCGATGCTGGAGGAAATACAAGGACTATATGGACAACACCATCAGCCGTGTTTTCTTTATCTCTCTAGTGAAGTCATTAAG....................................................................................ATATTTGGTTCAGATCCATCCTGTGCAAATTACTTGAAAGTTCTCATTGAGTCTCTCTTTAGCCATACAGCATGTCTTCTTACAAAGATTCAG......................................................................GATTTCCCTTCCCGTCCGGATATAGCAGATGATTGTTTTTTGCTGGCATCAAGATGTATCCGATAATGTCCTCAACTATTTTTTCCCTCCACTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E745440" ref_strand="+" ref_description="SGN-E745440 [GI|47105638]">
      <seq>gagaattgaaagggcaaattgggcgaaaatggtggcactatcactgtacaagggaaatctccacagagtacctgaaactccacggcgatggctagtgccaacccccaaaatctctcataaggacttccaatgtctcctccgtcgccggtcccgagccctctctcgcctccaaaatcctcccgatgtctctcctaccaccgccaccgcttcaaaccctaaccctaacctcaaaactgataccaaatccaaacctgaggatgaggttcctgtttcgattccagtgaagatcgagaaggaggaagaggatgttcgagtggagaatgtgaaagagccggagaaattggttgattcatctgctgtcgtggttgaacctaagcttgaggttttggaaaacgatcagaaattggagggtcaggtgaatccctctggtgtggagactagcaacaaagaggatgcaactgataatcagaaaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcgtttgagcagtacatcaccatcttcagattctcaactgaggaagaccccctataatgtggttcctctcgcttcacgatctgttggagttactgttagtccttcacggtttgcacctccgggacagcaagggcaaccttcaagtctccccccagtgtccttatctggaacgaacattgttgcctcctctccttctcctgtagcatcaggcggcacttcagcatttcgagatcggtttgcaagcccatgaaaatgggagttgtgctagttgttactcctcctgtcagctggctttctgttctctcaacctcattctaagtttcaactggctaatctatgaagctgtaaattattctgtagttccaaattggtcattcgctgtaacggtagcagtgacgatgcagtgtctttaagtctggtgccttctagttggaagtatagtatttccgttaatctggctgggtgtgtgtccatccgatacttgtgaagtttcccatggtcatgtttttagttcttaaaagatgttagaaccaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94361" stop="104675"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94568" g_stop="94570" g_length="3"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="3" r_length="3" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94571" i_stop="94662" i_length="92">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.358" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94663" g_stop="95095" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="4" r_stop="436" r_length="433" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="95096" i_stop="100536" i_length="5441">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100537" g_stop="100644" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="544" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="100781" g_stop="101056" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="820" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="103900" g_stop="104372" g_length="473"/>
          <reference_exon_boundary r_type="cDNA" r_start="821" r_stop="1293" r_length="473" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1294" polyA_stop="1306"/>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E745440" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1293</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E745440" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94568" e_stop="94570"/>
          <exon e_start="94663" e_stop="95095"/>
          <exon e_start="100537" e_stop="100644"/>
          <exon e_start="100781" e_stop="101056"/>
          <exon e_start="103900" e_stop="104372"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGATATTCTTTTCGAAATGGAGAGAATACCACTTTATTATATACTCATTCATATTCGATATGTATAAATAAGAAAAACTGAAAAGGGAAAATAGAATTGAAAGGGCAAATTGGGCGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAGGTATTGAATTGCAATTATTGATCTATTTTGTTTGTATGGTGTTATCCATGGATTTTGCTGGCTTTAGTTATGATTCGCTTATGCATCTTTCTGTTTTCTCTTAGTAAGGAAGGGATCCCAGCCAATTCAGGGTAGAAGTTAAGGGTGTGTATACCTTACGAAGCTTTTTACCCTTTTTGCGATGAGGCTGCTCCAAGTCTGGACTCTCCAACCATGACCTACAGCTTTTCCTCATTTTTGTTTATTATGTTTAGGAATTCTTAATATATGTCAATAAAAAAATATGTATCAGATGATTTGTAAGAACTAATACTGTTTATTTCTATGGAAGAGCGTAATGATATATGTGTAGTTGGTTTAAGACTAGCATTTTTTTAGCAGAAGCGTCATGTACTGATTAGAGATGAGGAGGTATATTTGCCTGAGGGTTGGGATACTTACATTAGATCTGTTCGGGGGATACTGCTTTCAGAAATTAAGGATAAATGGAGAGACAGTGAATGCTACATGCTACATTGGATTTATGGAGATAGGGAGAAGAGTCGTTCTTTCCGTATAGGGTGCCCATGAAGGTGTGTTTCCTTGCTTGATTAGGGGCGGGTGAAGTGATATTGATGGCTGAGAACATGAGATAGAAAAGGAGCACCTATGTTGGTGTTACATCTACAGATGTTTGGGTGAATACGTAGACCTGTCTCCTGTTACATTTTCAGGTGGTTGTGCACTCATTGTTGGCAATTCTGAATCGTTTGGTGGATACATGAGTATTTGTCAGAGTTTCTCTATATCGGAAGCAATCTGTAATTCCAGACTTTTCACCTACTCGTTTAACCGGAACCCAACATACTAAATTTAAGAGAATATCAAATATGAAGTCGGTCGCTTTCACAAAACTTTAGACGTTCCCAGTTACTTCTTTACTGACACAAGCCAAAACCAAATTTACAAGACCGACACAAGGAGGAAAACTCTAGGATTTAAGCAAAATAATATACTATATTAGTCTAAATAGAATGATGTCCCATGCGAGGTAAGTGCGGAGCTTGTTAGCTCTGTGACTCTGTATGAGTCAAAGTGTCACCCTTAAATGAATTATCTTTGGGGGGGGGGGAGGAGTTGGATTCAGTTGCACTAATTGCGTGAGTAATAACATCAACCATACATTTTATATGGAGCAGGTATACATAAGGAATCATGCAATTTATAAGATCCTCAACTATGTCCTACTTAAATCAATATAGCCTAAGTTGCTCGGGTGTGGTTTCCGATAATGCGGACCTAGAGCTCAAATCCTATATGATCTAAATTTTTAGATTTGGGTATATGGATCCATGTATGGATATGGGAGCGGGGGTTCGGCTAAAAATAATTCAAATAGCTAAAAATAGAGTTATAAAGCCTAAGTTATGAGATATTATATGGACGTCTTGAGATGAAAATGTTGATCAAGAGGAGAAAGAGATAAAAGGAAAAAGAGTGACAATAGAAATTAATATATCCAAGGTATTTCATTTCTTCAATTTCACCTTAATTTTTGTTTTGCGCATATAAATCATTGAATCTGTCCAAATTTCTCCCTCAAATTTGGTTTAAGTATCCCAAATTGGTTGACCATATCGTTTACGGATGCCACACCATCACTCACACCCGTTTCGTGTCGACATGGGTGCGAGAACAAAGGCGAAGAGTCCGTGCAACTTAGGATATAACCATTGTTGTGAAAAGCGCAGAAAAAGCGCGCTTCAAAGCGACACGACCCTTGTGCGCTTTTTTATCTTGAGGCGAGGCGATCTGAAGAAAACTCTCGCTTCAGATGAAGAAGCGACCCTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAAAAGCGACAATTAGTTTTTTTTTAATAAAAAAATTAGGTTTTTTTTTATAAAAAAATCTGAAATATAACCTTCTCTCTCCTCACGACTCTTTTCCTTCTTTCTCTTCTCGCAACTCTTCTTTCACAACACTTCTTTCCCTTCTTTCTCTCCTCGCAGCTCTTCTTTCACAATACTTCTTTCCCTTCTTTCTCTCCTGACGATCTCGACTGAGTCTGCCTCTTTCTTCAACCTCGACTGTAGGTAACTTTTTGTTCATCTCTTTTTTAGCTAATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATCAATCTTTGCCTGTGCTTCATCTCTTCATCTCTCTGAGTTTCAACTACTCTAGTTTTTTCTTCTTCTTCTCTTCTTTTCTTCATCTCTGCTGCTTGCTCTGTTTCTAATTACTGACTGCTGCCTCCTCTGTTTTTTTTTTCTTCAATTCTTTTGCTTTTTTTTATTTTTTTATTTTGTGATCAGTCTAGCAGCCTTGTTGAAGAATAGGAGTTTGAATCTTTGTGACTTAATTATATTTTTGATTTTTTGCTTTATATGTTATGACTTATGAGTATTTTTGCCTATGTAATTTCTTTCAATCTAAGACTATATTACCTCTATTTAGTTATTTAATATTTTTTATTTTTATACTAAATGTCGCTTTTTTTTTCTAAAAAAAAGCGCGCTTCGCTTCTGTGAAGCAAGCCTTCGTAGCTTTTTTCCGCTTCTCGCTTCCCAAAACACGGATATAACAATTCGTGTGTGAAATAAATGATCAAAATGGATGAAAATATACATTTTAGATCCATTTATCCTTTTCTACTTAATATCCTTATATAGTGGGAGATACATTAACCAAAATCGATGTAAATTTGGACACCACAAGTCTATCATGGCTTTCTGACTATCCCATCAGCTAGGTTCCCTTCTAGAGGGCTCAAGTGTGATATTCATATTACTGGTTCTTTCCTGCTAGTATAGGAAAATATTATACAAGGTGCGACCATGTCTAGTGACCTCAACGTTAGATGATAGTGATCTAGCAAAGCTTACTCCTGAAGTATCTTCCTTACAACAACAACATACCCAGTATGATCCCACATAGTTAGGGTCTAGGGAAGGTAGAGTTTACACAGAACTTAACCCTACCTCAGAGGTATTGAAGTATCTTCCATATAAGACAAAATGTTGTCATATTTTTTTGTGTTAAGAATTTATTCCAATAGTATATATAGCAACTAGGTTTAAGGATAATCAATATGTCAAAGTCATTATAAAGATGATTTTGTACATTTCCAATTGTGGACCATACTTTCACTTGTTCGTGTGCAGGTAATCGATTTGTTTTTTATAAATCGTTTCAATGCAAGAATACAAACTCAAAATTATGCTATAATTGAAATTCAACTATGAAAGAATTATAACTCATAGTACTATTGCTGAAAACTCCAATTTGATAATTGCGTCGTCAAAGTATCAAATATCTTATAATAGGTCATAACTTTGTATCTTAATCATTCATAGAACTTGTGAAATTCCATGTTTTTAGCAATAAGATCTCAATTTCCCAATTCGACTCTAACATTAACTCTTAACATTAAGTCGATGTGGGTTTATTAGTTTGGCTGTATTCTCCATTCTAAAAAAAGTTTATCAGGAATCCTAAATAGCAAATGATGAAACTGCTAGTTCAAGAATAAAGACAAAACTTGTGTTTATATCATGTTACTCCGAGCCAACTTTAAATAAAGTGTTGTCTTAGCAGTTAGCACCGTTTCGGGAAAAATATATTTTCGATCATCAAGTTTGAAACCTAAATCAACTTCTTCCCCAAATTGAAAGCTTCTTTAAAATTCCAGATTATTGCCTCCTCAAATCTCCATTTATGAACAAGGTATTTTAACTTTTGATATAATGTTGAATCTAGTGCTGAATACCTCATTAATTTAAGGTCGCTTCACTCCTATTTCCTACTGTTTTATACCCTAAAGAAGAATTTAGTTAGTTGAATATGGTTTTAAAGAGTGACCTGAATTGTGATTACAGCAAAAAAATTTGCTTCTTCTCCTTTAGCTTGTGCTTAGGTTTTAAAGGTAGTAACTTCTATTTATGATCTTGAAGTTCTTCTTATTTTTTTTTTTGCTTTCTTGCTTCCTTTCCTTTTTTTTTCCTTCTTTCCTGTAGCTCTTGTTTCCCCCTTGCGAAATGCTGTTGGAAAGCTTCCTCTTAAAACCAGTGCTGCTGGCTTTTGTCTCTATTGCCAACCGCTCCTCTTCTTTTTTTCTCCTTTTTTAATAGCCGACGGGTCAAGGATAATGGGCTGGCTATTTTAGTTACTCGCTTATTTTAAATGTGCCAAGTCCAATTCTTTAAGTCATTACACACGTTGTGGGTCAGTGGTTATTTGGTCTCTTTTTTATGGTCCTATCCATTCATCTCGACATGAGCTAGTTTTTGGGGTTGAGTTATGCCGTGGTCCAATTCTTTGTCATGGTACCATAGTCAAGTCCATCCCAATTCATGTTTACCTGATGTTGGGCCTCCCATCTTATATTTTCTTCGCTCCAAAGGTTCAACCTTGAGCGCGTGCGACCGGGGTGGGTGGGTAGGGGGTTGGGGTTAAGGTTACCTAGTCTTTATATGATGTGGGCAATTCTTCCCTCATGAGCTAGCTTTAGGATTGAGTTAGACCCAAGGTTGTTTTTTATTTCAGAAGGTGAACAAGAAGATCGAAGGCGTCGGATGATGCTCCATTAGCCTTTATGTGGGTTATATTGAAAGAGAAAAAATAGGATAACATTTGAAGGGGTTGACAATGACTCTGTTAAATTAAAAAAGTAGCCTCTTGTGTATGATATCTCTTTGGTGTACCTATGAGGTTCCTATTTGTGTAGAAGACCGGATATCTTCTGTTGAGAACCATACATTTGTTTAGGTTTCTATACTTTTTGATATTTGACTTGTATTACCGATTTCCCATCATTGATAGTATTGCTTATTAAATTAATGAAAAAGGAGAAATGGTAAATGAAATTGCCTTATTGAATATATGACAGCTGTTTGAATAGTGCTAATTATGTCGTACACATTTTGATTGAACAGCCTCATTAGCTGCAAAGGCACAATATCTTATGCTAATGCCTTCCTTTTCCTCTTCATTCTTATTTGCTGTCCGTTGGTACCTCTGTTCTTCTCTTACCTCTTATTTGTGCATTCATTCATCTGTATATTATATGTTATTTGGCAGTTGATCCTCTTCTAAAATTTACCAAAAATTGATTAGCCTAGTTCTCTTGACATGGCTCATTGTAGATTATAGTGAATCCTCATATTTATGTCTGAATATATTTTCCCAACTGCCAATGTGGTTAGCAGAGAGCGATAGGATGGGGTTGGAAGGCATCTGATATGCAAAATATATGATTATATAAGTATTATGTTTGAGGTCAGGGTCAACTATACATTTGGTGCATAATTTAGAACAAGGACCAGCTCAAAATTGTTTTCTTCTTGTTTCCATTTAACTTCTTAATTTTTCTTATAACTCTCCTTGGCAGACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTGGTAAGTGCCCTATCTATGCGTGCATTGTTACCTTTGGCTTTCATTTGTGGCGCTACACCACCAGGAGTGGAAAAAGAGGGCTTTAATTTTTGTTTCTAATATAATTAATCTAGCAAAGATTTAAAAAGTTTTAAGTAAAGCAACAACATTCAATATGTGCAAGACTGCAAGTTAGTTCATCATATTATTGCTGGTTCACTCCCTTGAACCAAGTCTTCTATTTATCTTCTTCCTCAATGGAGCAGATCTTAATTTTTCTTTCATAGAACCATGTCCAAGGCATCTCGAAATGTGTGCTCTTGGTAACATTTGCTGAAAATTAAGGACCCCATATTGAACTTCTATTGGACATGAGATTTTGTTACAATTGTGTCTCTGTAACTAGTTTTGAGCTGTTCCAATCATTTTCTGCCACTTGTTGGACTAATTGGACCTTGCAATAAATTATGTTGCTACTTTGCACATGCCATAATAAGGGTTAGTGCTTTGACTAAGGGAAGATGATATATGTATATATATATATATGTATATATATATATATTATCTTGTTGTTGCATCAATGGAGAAGTTTATGTGCTATTTTACCTTGTTAATACTAGTTGTAAGAGCAAAAATTACTTTGTGGCCATTTTCTTCAGTGCAAACTGGGAATCAACATGTGGGATGAGGGATTATTGGAGTTATATATCAGCCTTCAACCACTTCCCCTTGATGTGAAATTTTCAGTCCCCTTTCTTTGTGAATAATGGAGTTCCAGAGAATGTACGATGTTCGGAGACTTGAACCAAGAGGTGCATCCTTAGATTACGTTAGGGCAATTAAATACATGTACTATGGAGCAAGGAAACTCAGATCACTTCTCGTTGTGATGGGGTTGCACCAGGGATCGACACATAGCCCATTTCTAGTTACTAACACGACTTATCCTAGGAAAAGTCCATGATATATGCTCTTTGCAGATGACAATGTGGTAATGAGACCAGGACAGAGTTAACAATAGGTGCCTTAACAATATATTGGAAATTTGAGGACAGACGTTGGAGTATAAAGAGTCTGGGTTGAGTAGGACTTAGACAAAATACTTGAAGTTCAAGTTCAATGACGTAAAACACATGGTAGATGTGGAAGTAAGGATTGAAACAAGCAGGGATCAATGATTCAGGAAAATAAGGAGATAGACGAAGATGTTACACATTGTATTGGAGCAGGTGGATGACGTTCACTGTCTTTTATGATAAGATTGTACCACCAAAGCCTTAAGGTAGGTATTACAAAGTGGTGGTCAGACTAGCTATGGACAGAGTGTTGACTAGACAAGAACTCGCATGTATAGAAGATGAGAGTAGTAGAAATGAGAATGTTGAGTTGGATGTTTGGGCATACTAAGATTGAGATTAGGAATGAAGCTATACGCGACATTGTGGGATAGGGCGCCTTGGTGAACAAGATGAGGCATGTGAAGCTGAGATGGTTCGAACATGTGAAGGAAACATGCATGAATACCCCGATTAGGAGCGAGAGGTTGGCTATAGAGGATGTAACATGATGTAGAGGTAGACCGAGAAGTCTCAAAAGAAATGATTAGATAGGACATGACTCATGCAGCTTACCTTTATGAGGACATGACCTTGGCCCTAGATAGGAAGATATGGCGGTCAAAAATTAGGGTAGAAGGTCAGTAGGTCGAACATTGTCTTGTTCTCTCTTACTGTCTTATTCGATTTTAGTATTACATGATTTTTCATTTGCTAACAGCTACCGTTATTTTAAATTTTTTGGTGTTGCTATTGCTCTCTTTATTGATTTCAGCATGACTTTGATTTTAGGATTACATTATTGTATTTGCTTTGCATACTTGTTTTTTATATGCTTTACCTGTGTCGTTTATCTGGTAGATACAACCTCTCTACCTTTCAAAAGGTAGGGGTAAGGCCGTGTACACACCATCCTCCTCAGACCCCACTTGTGGGATTATAACTGGCCCAGTTGAGCTGGGTATGTTTTTATTGGATCTCCAGATGAAGACCAGACAATACTTTTCTTGACAAATTGCTTTACGTGGAAGGCTGCTGATACTGCATTAGTTGCTTACATTTGGTTTTCACTAGACATCTTTTTCATATTATACATAAATATGCAGGCTACACTAGAAACTACTATATAGAATTGGATAATCCGTAGTGAATAAATTTATCTTGGGTCTGTTTTGTTTTCTCACTCCATGTAGCATGGGCACTTTATTAGATACATATTCAAGTATAGTTTAAGGCTCCACCTGCAAGGACTTTTTTAACTTTAACTTCTTCCAATTTTTGCAAAGTGGACTATTTGTTAAATCAAAAGTAGATATATATTAGCAGCTTCAAAAAAAAAAAGTAGATGTATATTAGAATCTAGCTATTAGTAGTCCTTTGTAATTATAATGATGAACAACAATATATTTTCCTAATCATATGTTAGTCGACTTACTAGTTAATTAACTAAATAGTTCTTATTGTATCCTCAGGCTACGTTCCTTTGAGGTCTACTTTGATATATAGGGTGAAATGGTAGGGCAAAGTGACAAGACACTGAAGAAAACAGCTATAAGAAGAAAAGATATGAAAGCAGATGAAGAATTAGTTCTCATAAACCAGTTAAAAAAAAGTCATGAGATTACCATTAAGTAGCTTATCTAGTAAAATTTGAGTCAGGGAGCAGGGAGCTGAACTATACACCACAGATAAAAATCAGTTCATAAAAAATTCAGCCAATTGGTTTATGAGAAAACTAATTCTTAAATAGTATGTAATAAATTTCACTAGTTCAAGAAATCCATTCTCACTTGCTGTCTATTTTTTCAGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTTAAGTCTGGTGCCTTCTAGTTGGAAGTATAGTATTTCCGTTAATCTGGCTGGGTGTGTGTCCATCCGATACTTGTGAAGTTTCCCATGGTCATGTTTTTAGTTCTTAAAAGATGTTAGAACTGA</genome_strand>
        <mrna_strand>GAG............................................................................................AATTGAAAGGGCAAATTGGGCGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTTAAGTCTGGTGCCTTCTAGTTGGAAGTATAGTATTTCCGTTAATCTGGCTGGGTGTGTGTCCATCCGATACTTGTGAAGTTTCCCATGGTCATGTTTTTAGTTCTTAAAAGATGTTAGAACCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E205182" ref_strand="+" ref_description="SGN-E205182 [cLEC-16-N17]">
      <seq>tagaattgaaagggcaaattgggcgaaaatggtggcactatcactgtacaagggaaatctccacagagtacctgaaactccacggcgatggctagtgccaacccccaaaatctctcataaggacttccaatgtctcctccgtcgccggtcccgagccctctctcgcctccaaaatcctcccgatgtctctcctaccaccgccaccgcttcaaaccctaaccctaacctcaaaactgataccaaatccaaacctgaggatgaggttcctgtttcgattccagtgaagatcgagaaggaggaagaggatgttcgagtggagaatgtgaaagagccggagaaattggttgattcatctgctgtcgtggttgaacctaagcttgaggttttggaaaacgatcagaaattggagggtcaggtgaatccctctggtgtggagactagcaacaaagaggatgcaactgataatcagaaaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94360" stop="100876"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94660" g_stop="95095" g_length="436"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="436" r_length="436" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95096" i_stop="100536" i_length="5441">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100537" g_stop="100576" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="476" r_length="40" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E205182" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>476</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E205182" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94660" e_stop="95095"/>
          <exon e_start="100537" e_stop="100576"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGAATTGAAAGGGCAAATTGGGCGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAGGTATTGAATTGCAATTATTGATCTATTTTGTTTGTATGGTGTTATCCATGGATTTTGCTGGCTTTAGTTATGATTCGCTTATGCATCTTTCTGTTTTCTCTTAGTAAGGAAGGGATCCCAGCCAATTCAGGGTAGAAGTTAAGGGTGTGTATACCTTACGAAGCTTTTTACCCTTTTTGCGATGAGGCTGCTCCAAGTCTGGACTCTCCAACCATGACCTACAGCTTTTCCTCATTTTTGTTTATTATGTTTAGGAATTCTTAATATATGTCAATAAAAAAATATGTATCAGATGATTTGTAAGAACTAATACTGTTTATTTCTATGGAAGAGCGTAATGATATATGTGTAGTTGGTTTAAGACTAGCATTTTTTTAGCAGAAGCGTCATGTACTGATTAGAGATGAGGAGGTATATTTGCCTGAGGGTTGGGATACTTACATTAGATCTGTTCGGGGGATACTGCTTTCAGAAATTAAGGATAAATGGAGAGACAGTGAATGCTACATGCTACATTGGATTTATGGAGATAGGGAGAAGAGTCGTTCTTTCCGTATAGGGTGCCCATGAAGGTGTGTTTCCTTGCTTGATTAGGGGCGGGTGAAGTGATATTGATGGCTGAGAACATGAGATAGAAAAGGAGCACCTATGTTGGTGTTACATCTACAGATGTTTGGGTGAATACGTAGACCTGTCTCCTGTTACATTTTCAGGTGGTTGTGCACTCATTGTTGGCAATTCTGAATCGTTTGGTGGATACATGAGTATTTGTCAGAGTTTCTCTATATCGGAAGCAATCTGTAATTCCAGACTTTTCACCTACTCGTTTAACCGGAACCCAACATACTAAATTTAAGAGAATATCAAATATGAAGTCGGTCGCTTTCACAAAACTTTAGACGTTCCCAGTTACTTCTTTACTGACACAAGCCAAAACCAAATTTACAAGACCGACACAAGGAGGAAAACTCTAGGATTTAAGCAAAATAATATACTATATTAGTCTAAATAGAATGATGTCCCATGCGAGGTAAGTGCGGAGCTTGTTAGCTCTGTGACTCTGTATGAGTCAAAGTGTCACCCTTAAATGAATTATCTTTGGGGGGGGGGGAGGAGTTGGATTCAGTTGCACTAATTGCGTGAGTAATAACATCAACCATACATTTTATATGGAGCAGGTATACATAAGGAATCATGCAATTTATAAGATCCTCAACTATGTCCTACTTAAATCAATATAGCCTAAGTTGCTCGGGTGTGGTTTCCGATAATGCGGACCTAGAGCTCAAATCCTATATGATCTAAATTTTTAGATTTGGGTATATGGATCCATGTATGGATATGGGAGCGGGGGTTCGGCTAAAAATAATTCAAATAGCTAAAAATAGAGTTATAAAGCCTAAGTTATGAGATATTATATGGACGTCTTGAGATGAAAATGTTGATCAAGAGGAGAAAGAGATAAAAGGAAAAAGAGTGACAATAGAAATTAATATATCCAAGGTATTTCATTTCTTCAATTTCACCTTAATTTTTGTTTTGCGCATATAAATCATTGAATCTGTCCAAATTTCTCCCTCAAATTTGGTTTAAGTATCCCAAATTGGTTGACCATATCGTTTACGGATGCCACACCATCACTCACACCCGTTTCGTGTCGACATGGGTGCGAGAACAAAGGCGAAGAGTCCGTGCAACTTAGGATATAACCATTGTTGTGAAAAGCGCAGAAAAAGCGCGCTTCAAAGCGACACGACCCTTGTGCGCTTTTTTATCTTGAGGCGAGGCGATCTGAAGAAAACTCTCGCTTCAGATGAAGAAGCGACCCTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAAAAGCGACAATTAGTTTTTTTTTAATAAAAAAATTAGGTTTTTTTTTATAAAAAAATCTGAAATATAACCTTCTCTCTCCTCACGACTCTTTTCCTTCTTTCTCTTCTCGCAACTCTTCTTTCACAACACTTCTTTCCCTTCTTTCTCTCCTCGCAGCTCTTCTTTCACAATACTTCTTTCCCTTCTTTCTCTCCTGACGATCTCGACTGAGTCTGCCTCTTTCTTCAACCTCGACTGTAGGTAACTTTTTGTTCATCTCTTTTTTAGCTAATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATCAATCTTTGCCTGTGCTTCATCTCTTCATCTCTCTGAGTTTCAACTACTCTAGTTTTTTCTTCTTCTTCTCTTCTTTTCTTCATCTCTGCTGCTTGCTCTGTTTCTAATTACTGACTGCTGCCTCCTCTGTTTTTTTTTTCTTCAATTCTTTTGCTTTTTTTTATTTTTTTATTTTGTGATCAGTCTAGCAGCCTTGTTGAAGAATAGGAGTTTGAATCTTTGTGACTTAATTATATTTTTGATTTTTTGCTTTATATGTTATGACTTATGAGTATTTTTGCCTATGTAATTTCTTTCAATCTAAGACTATATTACCTCTATTTAGTTATTTAATATTTTTTATTTTTATACTAAATGTCGCTTTTTTTTTCTAAAAAAAAGCGCGCTTCGCTTCTGTGAAGCAAGCCTTCGTAGCTTTTTTCCGCTTCTCGCTTCCCAAAACACGGATATAACAATTCGTGTGTGAAATAAATGATCAAAATGGATGAAAATATACATTTTAGATCCATTTATCCTTTTCTACTTAATATCCTTATATAGTGGGAGATACATTAACCAAAATCGATGTAAATTTGGACACCACAAGTCTATCATGGCTTTCTGACTATCCCATCAGCTAGGTTCCCTTCTAGAGGGCTCAAGTGTGATATTCATATTACTGGTTCTTTCCTGCTAGTATAGGAAAATATTATACAAGGTGCGACCATGTCTAGTGACCTCAACGTTAGATGATAGTGATCTAGCAAAGCTTACTCCTGAAGTATCTTCCTTACAACAACAACATACCCAGTATGATCCCACATAGTTAGGGTCTAGGGAAGGTAGAGTTTACACAGAACTTAACCCTACCTCAGAGGTATTGAAGTATCTTCCATATAAGACAAAATGTTGTCATATTTTTTTGTGTTAAGAATTTATTCCAATAGTATATATAGCAACTAGGTTTAAGGATAATCAATATGTCAAAGTCATTATAAAGATGATTTTGTACATTTCCAATTGTGGACCATACTTTCACTTGTTCGTGTGCAGGTAATCGATTTGTTTTTTATAAATCGTTTCAATGCAAGAATACAAACTCAAAATTATGCTATAATTGAAATTCAACTATGAAAGAATTATAACTCATAGTACTATTGCTGAAAACTCCAATTTGATAATTGCGTCGTCAAAGTATCAAATATCTTATAATAGGTCATAACTTTGTATCTTAATCATTCATAGAACTTGTGAAATTCCATGTTTTTAGCAATAAGATCTCAATTTCCCAATTCGACTCTAACATTAACTCTTAACATTAAGTCGATGTGGGTTTATTAGTTTGGCTGTATTCTCCATTCTAAAAAAAGTTTATCAGGAATCCTAAATAGCAAATGATGAAACTGCTAGTTCAAGAATAAAGACAAAACTTGTGTTTATATCATGTTACTCCGAGCCAACTTTAAATAAAGTGTTGTCTTAGCAGTTAGCACCGTTTCGGGAAAAATATATTTTCGATCATCAAGTTTGAAACCTAAATCAACTTCTTCCCCAAATTGAAAGCTTCTTTAAAATTCCAGATTATTGCCTCCTCAAATCTCCATTTATGAACAAGGTATTTTAACTTTTGATATAATGTTGAATCTAGTGCTGAATACCTCATTAATTTAAGGTCGCTTCACTCCTATTTCCTACTGTTTTATACCCTAAAGAAGAATTTAGTTAGTTGAATATGGTTTTAAAGAGTGACCTGAATTGTGATTACAGCAAAAAAATTTGCTTCTTCTCCTTTAGCTTGTGCTTAGGTTTTAAAGGTAGTAACTTCTATTTATGATCTTGAAGTTCTTCTTATTTTTTTTTTTGCTTTCTTGCTTCCTTTCCTTTTTTTTTCCTTCTTTCCTGTAGCTCTTGTTTCCCCCTTGCGAAATGCTGTTGGAAAGCTTCCTCTTAAAACCAGTGCTGCTGGCTTTTGTCTCTATTGCCAACCGCTCCTCTTCTTTTTTTCTCCTTTTTTAATAGCCGACGGGTCAAGGATAATGGGCTGGCTATTTTAGTTACTCGCTTATTTTAAATGTGCCAAGTCCAATTCTTTAAGTCATTACACACGTTGTGGGTCAGTGGTTATTTGGTCTCTTTTTTATGGTCCTATCCATTCATCTCGACATGAGCTAGTTTTTGGGGTTGAGTTATGCCGTGGTCCAATTCTTTGTCATGGTACCATAGTCAAGTCCATCCCAATTCATGTTTACCTGATGTTGGGCCTCCCATCTTATATTTTCTTCGCTCCAAAGGTTCAACCTTGAGCGCGTGCGACCGGGGTGGGTGGGTAGGGGGTTGGGGTTAAGGTTACCTAGTCTTTATATGATGTGGGCAATTCTTCCCTCATGAGCTAGCTTTAGGATTGAGTTAGACCCAAGGTTGTTTTTTATTTCAGAAGGTGAACAAGAAGATCGAAGGCGTCGGATGATGCTCCATTAGCCTTTATGTGGGTTATATTGAAAGAGAAAAAATAGGATAACATTTGAAGGGGTTGACAATGACTCTGTTAAATTAAAAAAGTAGCCTCTTGTGTATGATATCTCTTTGGTGTACCTATGAGGTTCCTATTTGTGTAGAAGACCGGATATCTTCTGTTGAGAACCATACATTTGTTTAGGTTTCTATACTTTTTGATATTTGACTTGTATTACCGATTTCCCATCATTGATAGTATTGCTTATTAAATTAATGAAAAAGGAGAAATGGTAAATGAAATTGCCTTATTGAATATATGACAGCTGTTTGAATAGTGCTAATTATGTCGTACACATTTTGATTGAACAGCCTCATTAGCTGCAAAGGCACAATATCTTATGCTAATGCCTTCCTTTTCCTCTTCATTCTTATTTGCTGTCCGTTGGTACCTCTGTTCTTCTCTTACCTCTTATTTGTGCATTCATTCATCTGTATATTATATGTTATTTGGCAGTTGATCCTCTTCTAAAATTTACCAAAAATTGATTAGCCTAGTTCTCTTGACATGGCTCATTGTAGATTATAGTGAATCCTCATATTTATGTCTGAATATATTTTCCCAACTGCCAATGTGGTTAGCAGAGAGCGATAGGATGGGGTTGGAAGGCATCTGATATGCAAAATATATGATTATATAAGTATTATGTTTGAGGTCAGGGTCAACTATACATTTGGTGCATAATTTAGAACAAGGACCAGCTCAAAATTGTTTTCTTCTTGTTTCCATTTAACTTCTTAATTTTTCTTATAACTCTCCTTGGCAGACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAA</genome_strand>
        <mrna_strand>TAGAATTGAAAGGGCAAATTGGGCGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E717624" ref_strand="+" ref_description="SGN-E717624 [FC02BA11]">
      <seq>gggcgattggcggccaatcggccgaattggaattgaaagggcaaactgtaagaaaatggtggcactatcactgtacaagggaaatctccacagagtacctgaaactccacggcgatggctagtgccaacccccaaaatctctcataaggacttccaatgtctcctccgtcgccggtcccgagccctctctcgcctccaaaatcctcccgatgtctctcctaccaccgccaccgcttcaaaccctaaccctaacctcaaaactgataccaaatccaaacctgaggatgaggttcctgtttcgattccagtgaaaatcgagaaggaggaaaaggatgttcgagtggagaatgtgaaagagccggagaaattggttgattcatctgctgtcgtggttgaacctaagcttgaggttttggaaaacgatcagaaattggagggtcaggtgaatccctctggtgtggagactagcaacaaagaggatgcaactgataatcagaaaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcgtttgagcagtacatcaccatcttcagattctcaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94357" stop="101333"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94663" g_stop="95095" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="463" r_length="433" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95096" i_stop="100536" i_length="5441">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100537" g_stop="100644" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="571" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100781" g_stop="101033" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="572" r_stop="824" r_length="253" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E717624" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>794</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E717624" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94663" e_stop="95095"/>
          <exon e_start="100537" e_stop="100644"/>
          <exon e_start="100781" e_stop="101033"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGAAAGGGCAAATTGGGCGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAGGTATTGAATTGCAATTATTGATCTATTTTGTTTGTATGGTGTTATCCATGGATTTTGCTGGCTTTAGTTATGATTCGCTTATGCATCTTTCTGTTTTCTCTTAGTAAGGAAGGGATCCCAGCCAATTCAGGGTAGAAGTTAAGGGTGTGTATACCTTACGAAGCTTTTTACCCTTTTTGCGATGAGGCTGCTCCAAGTCTGGACTCTCCAACCATGACCTACAGCTTTTCCTCATTTTTGTTTATTATGTTTAGGAATTCTTAATATATGTCAATAAAAAAATATGTATCAGATGATTTGTAAGAACTAATACTGTTTATTTCTATGGAAGAGCGTAATGATATATGTGTAGTTGGTTTAAGACTAGCATTTTTTTAGCAGAAGCGTCATGTACTGATTAGAGATGAGGAGGTATATTTGCCTGAGGGTTGGGATACTTACATTAGATCTGTTCGGGGGATACTGCTTTCAGAAATTAAGGATAAATGGAGAGACAGTGAATGCTACATGCTACATTGGATTTATGGAGATAGGGAGAAGAGTCGTTCTTTCCGTATAGGGTGCCCATGAAGGTGTGTTTCCTTGCTTGATTAGGGGCGGGTGAAGTGATATTGATGGCTGAGAACATGAGATAGAAAAGGAGCACCTATGTTGGTGTTACATCTACAGATGTTTGGGTGAATACGTAGACCTGTCTCCTGTTACATTTTCAGGTGGTTGTGCACTCATTGTTGGCAATTCTGAATCGTTTGGTGGATACATGAGTATTTGTCAGAGTTTCTCTATATCGGAAGCAATCTGTAATTCCAGACTTTTCACCTACTCGTTTAACCGGAACCCAACATACTAAATTTAAGAGAATATCAAATATGAAGTCGGTCGCTTTCACAAAACTTTAGACGTTCCCAGTTACTTCTTTACTGACACAAGCCAAAACCAAATTTACAAGACCGACACAAGGAGGAAAACTCTAGGATTTAAGCAAAATAATATACTATATTAGTCTAAATAGAATGATGTCCCATGCGAGGTAAGTGCGGAGCTTGTTAGCTCTGTGACTCTGTATGAGTCAAAGTGTCACCCTTAAATGAATTATCTTTGGGGGGGGGGGAGGAGTTGGATTCAGTTGCACTAATTGCGTGAGTAATAACATCAACCATACATTTTATATGGAGCAGGTATACATAAGGAATCATGCAATTTATAAGATCCTCAACTATGTCCTACTTAAATCAATATAGCCTAAGTTGCTCGGGTGTGGTTTCCGATAATGCGGACCTAGAGCTCAAATCCTATATGATCTAAATTTTTAGATTTGGGTATATGGATCCATGTATGGATATGGGAGCGGGGGTTCGGCTAAAAATAATTCAAATAGCTAAAAATAGAGTTATAAAGCCTAAGTTATGAGATATTATATGGACGTCTTGAGATGAAAATGTTGATCAAGAGGAGAAAGAGATAAAAGGAAAAAGAGTGACAATAGAAATTAATATATCCAAGGTATTTCATTTCTTCAATTTCACCTTAATTTTTGTTTTGCGCATATAAATCATTGAATCTGTCCAAATTTCTCCCTCAAATTTGGTTTAAGTATCCCAAATTGGTTGACCATATCGTTTACGGATGCCACACCATCACTCACACCCGTTTCGTGTCGACATGGGTGCGAGAACAAAGGCGAAGAGTCCGTGCAACTTAGGATATAACCATTGTTGTGAAAAGCGCAGAAAAAGCGCGCTTCAAAGCGACACGACCCTTGTGCGCTTTTTTATCTTGAGGCGAGGCGATCTGAAGAAAACTCTCGCTTCAGATGAAGAAGCGACCCTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAAAAGCGACAATTAGTTTTTTTTTAATAAAAAAATTAGGTTTTTTTTTATAAAAAAATCTGAAATATAACCTTCTCTCTCCTCACGACTCTTTTCCTTCTTTCTCTTCTCGCAACTCTTCTTTCACAACACTTCTTTCCCTTCTTTCTCTCCTCGCAGCTCTTCTTTCACAATACTTCTTTCCCTTCTTTCTCTCCTGACGATCTCGACTGAGTCTGCCTCTTTCTTCAACCTCGACTGTAGGTAACTTTTTGTTCATCTCTTTTTTAGCTAATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATCAATCTTTGCCTGTGCTTCATCTCTTCATCTCTCTGAGTTTCAACTACTCTAGTTTTTTCTTCTTCTTCTCTTCTTTTCTTCATCTCTGCTGCTTGCTCTGTTTCTAATTACTGACTGCTGCCTCCTCTGTTTTTTTTTTCTTCAATTCTTTTGCTTTTTTTTATTTTTTTATTTTGTGATCAGTCTAGCAGCCTTGTTGAAGAATAGGAGTTTGAATCTTTGTGACTTAATTATATTTTTGATTTTTTGCTTTATATGTTATGACTTATGAGTATTTTTGCCTATGTAATTTCTTTCAATCTAAGACTATATTACCTCTATTTAGTTATTTAATATTTTTTATTTTTATACTAAATGTCGCTTTTTTTTTCTAAAAAAAAGCGCGCTTCGCTTCTGTGAAGCAAGCCTTCGTAGCTTTTTTCCGCTTCTCGCTTCCCAAAACACGGATATAACAATTCGTGTGTGAAATAAATGATCAAAATGGATGAAAATATACATTTTAGATCCATTTATCCTTTTCTACTTAATATCCTTATATAGTGGGAGATACATTAACCAAAATCGATGTAAATTTGGACACCACAAGTCTATCATGGCTTTCTGACTATCCCATCAGCTAGGTTCCCTTCTAGAGGGCTCAAGTGTGATATTCATATTACTGGTTCTTTCCTGCTAGTATAGGAAAATATTATACAAGGTGCGACCATGTCTAGTGACCTCAACGTTAGATGATAGTGATCTAGCAAAGCTTACTCCTGAAGTATCTTCCTTACAACAACAACATACCCAGTATGATCCCACATAGTTAGGGTCTAGGGAAGGTAGAGTTTACACAGAACTTAACCCTACCTCAGAGGTATTGAAGTATCTTCCATATAAGACAAAATGTTGTCATATTTTTTTGTGTTAAGAATTTATTCCAATAGTATATATAGCAACTAGGTTTAAGGATAATCAATATGTCAAAGTCATTATAAAGATGATTTTGTACATTTCCAATTGTGGACCATACTTTCACTTGTTCGTGTGCAGGTAATCGATTTGTTTTTTATAAATCGTTTCAATGCAAGAATACAAACTCAAAATTATGCTATAATTGAAATTCAACTATGAAAGAATTATAACTCATAGTACTATTGCTGAAAACTCCAATTTGATAATTGCGTCGTCAAAGTATCAAATATCTTATAATAGGTCATAACTTTGTATCTTAATCATTCATAGAACTTGTGAAATTCCATGTTTTTAGCAATAAGATCTCAATTTCCCAATTCGACTCTAACATTAACTCTTAACATTAAGTCGATGTGGGTTTATTAGTTTGGCTGTATTCTCCATTCTAAAAAAAGTTTATCAGGAATCCTAAATAGCAAATGATGAAACTGCTAGTTCAAGAATAAAGACAAAACTTGTGTTTATATCATGTTACTCCGAGCCAACTTTAAATAAAGTGTTGTCTTAGCAGTTAGCACCGTTTCGGGAAAAATATATTTTCGATCATCAAGTTTGAAACCTAAATCAACTTCTTCCCCAAATTGAAAGCTTCTTTAAAATTCCAGATTATTGCCTCCTCAAATCTCCATTTATGAACAAGGTATTTTAACTTTTGATATAATGTTGAATCTAGTGCTGAATACCTCATTAATTTAAGGTCGCTTCACTCCTATTTCCTACTGTTTTATACCCTAAAGAAGAATTTAGTTAGTTGAATATGGTTTTAAAGAGTGACCTGAATTGTGATTACAGCAAAAAAATTTGCTTCTTCTCCTTTAGCTTGTGCTTAGGTTTTAAAGGTAGTAACTTCTATTTATGATCTTGAAGTTCTTCTTATTTTTTTTTTTGCTTTCTTGCTTCCTTTCCTTTTTTTTTCCTTCTTTCCTGTAGCTCTTGTTTCCCCCTTGCGAAATGCTGTTGGAAAGCTTCCTCTTAAAACCAGTGCTGCTGGCTTTTGTCTCTATTGCCAACCGCTCCTCTTCTTTTTTTCTCCTTTTTTAATAGCCGACGGGTCAAGGATAATGGGCTGGCTATTTTAGTTACTCGCTTATTTTAAATGTGCCAAGTCCAATTCTTTAAGTCATTACACACGTTGTGGGTCAGTGGTTATTTGGTCTCTTTTTTATGGTCCTATCCATTCATCTCGACATGAGCTAGTTTTTGGGGTTGAGTTATGCCGTGGTCCAATTCTTTGTCATGGTACCATAGTCAAGTCCATCCCAATTCATGTTTACCTGATGTTGGGCCTCCCATCTTATATTTTCTTCGCTCCAAAGGTTCAACCTTGAGCGCGTGCGACCGGGGTGGGTGGGTAGGGGGTTGGGGTTAAGGTTACCTAGTCTTTATATGATGTGGGCAATTCTTCCCTCATGAGCTAGCTTTAGGATTGAGTTAGACCCAAGGTTGTTTTTTATTTCAGAAGGTGAACAAGAAGATCGAAGGCGTCGGATGATGCTCCATTAGCCTTTATGTGGGTTATATTGAAAGAGAAAAAATAGGATAACATTTGAAGGGGTTGACAATGACTCTGTTAAATTAAAAAAGTAGCCTCTTGTGTATGATATCTCTTTGGTGTACCTATGAGGTTCCTATTTGTGTAGAAGACCGGATATCTTCTGTTGAGAACCATACATTTGTTTAGGTTTCTATACTTTTTGATATTTGACTTGTATTACCGATTTCCCATCATTGATAGTATTGCTTATTAAATTAATGAAAAAGGAGAAATGGTAAATGAAATTGCCTTATTGAATATATGACAGCTGTTTGAATAGTGCTAATTATGTCGTACACATTTTGATTGAACAGCCTCATTAGCTGCAAAGGCACAATATCTTATGCTAATGCCTTCCTTTTCCTCTTCATTCTTATTTGCTGTCCGTTGGTACCTCTGTTCTTCTCTTACCTCTTATTTGTGCATTCATTCATCTGTATATTATATGTTATTTGGCAGTTGATCCTCTTCTAAAATTTACCAAAAATTGATTAGCCTAGTTCTCTTGACATGGCTCATTGTAGATTATAGTGAATCCTCATATTTATGTCTGAATATATTTTCCCAACTGCCAATGTGGTTAGCAGAGAGCGATAGGATGGGGTTGGAAGGCATCTGATATGCAAAATATATGATTATATAAGTATTATGTTTGAGGTCAGGGTCAACTATACATTTGGTGCATAATTTAGAACAAGGACCAGCTCAAAATTGTTTTCTTCTTGTTTCCATTTAACTTCTTAATTTTTCTTATAACTCTCCTTGGCAGACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAAC</genome_strand>
        <mrna_strand>AATTGAAAGGGCAAACTGTAAGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAAATCGAGAAGGAGGAAAAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E572351" ref_strand="+" ref_description="SGN-E572351 [31491]">
      <seq>aattgggcgaaaatggtggcactatcactgtacaagggaaatctccacagagtacctgaaactccacgtcgatggctaatgccaacccccaaaatctctctcaaggacttccgatgtctcctccgtcgccggtcccgagccctctctcgcctcccaactcctcccgatgtctctcctaccaccgccaccgcttcaaaccctaaccctaacctcaaaactgataccaaatccaaacctgaggaggaggttcctgtttcggtcccagtaaagaccgagaaggaggaagaggatgttcgagtggagaatgtggaagtgccggagaaattggttgactcatctgctgtcgtggttgaacctaagcttgaggttttggaaaacgatcagaaattgttggttccgatgaacccctccgttttggagactatcaacaaagaggatggaactgataatcagaaaaaaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacagttactaaaacagattttgaatgcagaagaggagctaaagagacggagcatgcaaggtatggcagtgcggccatcactcccacttcaagtggatactacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaacccccattggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttttctcgggaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94376" stop="101281"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94676" g_stop="95095" g_length="420"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="420" r_length="420" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95096" i_stop="100536" i_length="5441">
            <donor d_prob="0.997" d_score="0.82"/>
            <acceptor a_prob="0.997" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100537" g_stop="100644" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="528" r_length="108" r_score="0.963"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100781" g_stop="100991" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="741" r_length="213" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E572351" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>739</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E572351" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94676" e_stop="95095"/>
          <exon e_start="100537" e_stop="100644"/>
          <exon e_start="100781" e_stop="100991"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGGGCGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAGGTATTGAATTGCAATTATTGATCTATTTTGTTTGTATGGTGTTATCCATGGATTTTGCTGGCTTTAGTTATGATTCGCTTATGCATCTTTCTGTTTTCTCTTAGTAAGGAAGGGATCCCAGCCAATTCAGGGTAGAAGTTAAGGGTGTGTATACCTTACGAAGCTTTTTACCCTTTTTGCGATGAGGCTGCTCCAAGTCTGGACTCTCCAACCATGACCTACAGCTTTTCCTCATTTTTGTTTATTATGTTTAGGAATTCTTAATATATGTCAATAAAAAAATATGTATCAGATGATTTGTAAGAACTAATACTGTTTATTTCTATGGAAGAGCGTAATGATATATGTGTAGTTGGTTTAAGACTAGCATTTTTTTAGCAGAAGCGTCATGTACTGATTAGAGATGAGGAGGTATATTTGCCTGAGGGTTGGGATACTTACATTAGATCTGTTCGGGGGATACTGCTTTCAGAAATTAAGGATAAATGGAGAGACAGTGAATGCTACATGCTACATTGGATTTATGGAGATAGGGAGAAGAGTCGTTCTTTCCGTATAGGGTGCCCATGAAGGTGTGTTTCCTTGCTTGATTAGGGGCGGGTGAAGTGATATTGATGGCTGAGAACATGAGATAGAAAAGGAGCACCTATGTTGGTGTTACATCTACAGATGTTTGGGTGAATACGTAGACCTGTCTCCTGTTACATTTTCAGGTGGTTGTGCACTCATTGTTGGCAATTCTGAATCGTTTGGTGGATACATGAGTATTTGTCAGAGTTTCTCTATATCGGAAGCAATCTGTAATTCCAGACTTTTCACCTACTCGTTTAACCGGAACCCAACATACTAAATTTAAGAGAATATCAAATATGAAGTCGGTCGCTTTCACAAAACTTTAGACGTTCCCAGTTACTTCTTTACTGACACAAGCCAAAACCAAATTTACAAGACCGACACAAGGAGGAAAACTCTAGGATTTAAGCAAAATAATATACTATATTAGTCTAAATAGAATGATGTCCCATGCGAGGTAAGTGCGGAGCTTGTTAGCTCTGTGACTCTGTATGAGTCAAAGTGTCACCCTTAAATGAATTATCTTTGGGGGGGGGGGAGGAGTTGGATTCAGTTGCACTAATTGCGTGAGTAATAACATCAACCATACATTTTATATGGAGCAGGTATACATAAGGAATCATGCAATTTATAAGATCCTCAACTATGTCCTACTTAAATCAATATAGCCTAAGTTGCTCGGGTGTGGTTTCCGATAATGCGGACCTAGAGCTCAAATCCTATATGATCTAAATTTTTAGATTTGGGTATATGGATCCATGTATGGATATGGGAGCGGGGGTTCGGCTAAAAATAATTCAAATAGCTAAAAATAGAGTTATAAAGCCTAAGTTATGAGATATTATATGGACGTCTTGAGATGAAAATGTTGATCAAGAGGAGAAAGAGATAAAAGGAAAAAGAGTGACAATAGAAATTAATATATCCAAGGTATTTCATTTCTTCAATTTCACCTTAATTTTTGTTTTGCGCATATAAATCATTGAATCTGTCCAAATTTCTCCCTCAAATTTGGTTTAAGTATCCCAAATTGGTTGACCATATCGTTTACGGATGCCACACCATCACTCACACCCGTTTCGTGTCGACATGGGTGCGAGAACAAAGGCGAAGAGTCCGTGCAACTTAGGATATAACCATTGTTGTGAAAAGCGCAGAAAAAGCGCGCTTCAAAGCGACACGACCCTTGTGCGCTTTTTTATCTTGAGGCGAGGCGATCTGAAGAAAACTCTCGCTTCAGATGAAGAAGCGACCCTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAAAAGCGACAATTAGTTTTTTTTTAATAAAAAAATTAGGTTTTTTTTTATAAAAAAATCTGAAATATAACCTTCTCTCTCCTCACGACTCTTTTCCTTCTTTCTCTTCTCGCAACTCTTCTTTCACAACACTTCTTTCCCTTCTTTCTCTCCTCGCAGCTCTTCTTTCACAATACTTCTTTCCCTTCTTTCTCTCCTGACGATCTCGACTGAGTCTGCCTCTTTCTTCAACCTCGACTGTAGGTAACTTTTTGTTCATCTCTTTTTTAGCTAATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATCAATCTTTGCCTGTGCTTCATCTCTTCATCTCTCTGAGTTTCAACTACTCTAGTTTTTTCTTCTTCTTCTCTTCTTTTCTTCATCTCTGCTGCTTGCTCTGTTTCTAATTACTGACTGCTGCCTCCTCTGTTTTTTTTTTCTTCAATTCTTTTGCTTTTTTTTATTTTTTTATTTTGTGATCAGTCTAGCAGCCTTGTTGAAGAATAGGAGTTTGAATCTTTGTGACTTAATTATATTTTTGATTTTTTGCTTTATATGTTATGACTTATGAGTATTTTTGCCTATGTAATTTCTTTCAATCTAAGACTATATTACCTCTATTTAGTTATTTAATATTTTTTATTTTTATACTAAATGTCGCTTTTTTTTTCTAAAAAAAAGCGCGCTTCGCTTCTGTGAAGCAAGCCTTCGTAGCTTTTTTCCGCTTCTCGCTTCCCAAAACACGGATATAACAATTCGTGTGTGAAATAAATGATCAAAATGGATGAAAATATACATTTTAGATCCATTTATCCTTTTCTACTTAATATCCTTATATAGTGGGAGATACATTAACCAAAATCGATGTAAATTTGGACACCACAAGTCTATCATGGCTTTCTGACTATCCCATCAGCTAGGTTCCCTTCTAGAGGGCTCAAGTGTGATATTCATATTACTGGTTCTTTCCTGCTAGTATAGGAAAATATTATACAAGGTGCGACCATGTCTAGTGACCTCAACGTTAGATGATAGTGATCTAGCAAAGCTTACTCCTGAAGTATCTTCCTTACAACAACAACATACCCAGTATGATCCCACATAGTTAGGGTCTAGGGAAGGTAGAGTTTACACAGAACTTAACCCTACCTCAGAGGTATTGAAGTATCTTCCATATAAGACAAAATGTTGTCATATTTTTTTGTGTTAAGAATTTATTCCAATAGTATATATAGCAACTAGGTTTAAGGATAATCAATATGTCAAAGTCATTATAAAGATGATTTTGTACATTTCCAATTGTGGACCATACTTTCACTTGTTCGTGTGCAGGTAATCGATTTGTTTTTTATAAATCGTTTCAATGCAAGAATACAAACTCAAAATTATGCTATAATTGAAATTCAACTATGAAAGAATTATAACTCATAGTACTATTGCTGAAAACTCCAATTTGATAATTGCGTCGTCAAAGTATCAAATATCTTATAATAGGTCATAACTTTGTATCTTAATCATTCATAGAACTTGTGAAATTCCATGTTTTTAGCAATAAGATCTCAATTTCCCAATTCGACTCTAACATTAACTCTTAACATTAAGTCGATGTGGGTTTATTAGTTTGGCTGTATTCTCCATTCTAAAAAAAGTTTATCAGGAATCCTAAATAGCAAATGATGAAACTGCTAGTTCAAGAATAAAGACAAAACTTGTGTTTATATCATGTTACTCCGAGCCAACTTTAAATAAAGTGTTGTCTTAGCAGTTAGCACCGTTTCGGGAAAAATATATTTTCGATCATCAAGTTTGAAACCTAAATCAACTTCTTCCCCAAATTGAAAGCTTCTTTAAAATTCCAGATTATTGCCTCCTCAAATCTCCATTTATGAACAAGGTATTTTAACTTTTGATATAATGTTGAATCTAGTGCTGAATACCTCATTAATTTAAGGTCGCTTCACTCCTATTTCCTACTGTTTTATACCCTAAAGAAGAATTTAGTTAGTTGAATATGGTTTTAAAGAGTGACCTGAATTGTGATTACAGCAAAAAAATTTGCTTCTTCTCCTTTAGCTTGTGCTTAGGTTTTAAAGGTAGTAACTTCTATTTATGATCTTGAAGTTCTTCTTATTTTTTTTTTTGCTTTCTTGCTTCCTTTCCTTTTTTTTTCCTTCTTTCCTGTAGCTCTTGTTTCCCCCTTGCGAAATGCTGTTGGAAAGCTTCCTCTTAAAACCAGTGCTGCTGGCTTTTGTCTCTATTGCCAACCGCTCCTCTTCTTTTTTTCTCCTTTTTTAATAGCCGACGGGTCAAGGATAATGGGCTGGCTATTTTAGTTACTCGCTTATTTTAAATGTGCCAAGTCCAATTCTTTAAGTCATTACACACGTTGTGGGTCAGTGGTTATTTGGTCTCTTTTTTATGGTCCTATCCATTCATCTCGACATGAGCTAGTTTTTGGGGTTGAGTTATGCCGTGGTCCAATTCTTTGTCATGGTACCATAGTCAAGTCCATCCCAATTCATGTTTACCTGATGTTGGGCCTCCCATCTTATATTTTCTTCGCTCCAAAGGTTCAACCTTGAGCGCGTGCGACCGGGGTGGGTGGGTAGGGGGTTGGGGTTAAGGTTACCTAGTCTTTATATGATGTGGGCAATTCTTCCCTCATGAGCTAGCTTTAGGATTGAGTTAGACCCAAGGTTGTTTTTTATTTCAGAAGGTGAACAAGAAGATCGAAGGCGTCGGATGATGCTCCATTAGCCTTTATGTGGGTTATATTGAAAGAGAAAAAATAGGATAACATTTGAAGGGGTTGACAATGACTCTGTTAAATTAAAAAAGTAGCCTCTTGTGTATGATATCTCTTTGGTGTACCTATGAGGTTCCTATTTGTGTAGAAGACCGGATATCTTCTGTTGAGAACCATACATTTGTTTAGGTTTCTATACTTTTTGATATTTGACTTGTATTACCGATTTCCCATCATTGATAGTATTGCTTATTAAATTAATGAAAAAGGAGAAATGGTAAATGAAATTGCCTTATTGAATATATGACAGCTGTTTGAATAGTGCTAATTATGTCGTACACATTTTGATTGAACAGCCTCATTAGCTGCAAAGGCACAATATCTTATGCTAATGCCTTCCTTTTCCTCTTCATTCTTATTTGCTGTCCGTTGGTACCTCTGTTCTTCTCTTACCTCTTATTTGTGCATTCATTCATCTGTATATTATATGTTATTTGGCAGTTGATCCTCTTCTAAAATTTACCAAAAATTGATTAGCCTAGTTCTCTTGACATGGCTCATTGTAGATTATAGTGAATCCTCATATTTATGTCTGAATATATTTTCCCAACTGCCAATGTGGTTAGCAGAGAGCGATAGGATGGGGTTGGAAGGCATCTGATATGCAAAATATATGATTATATAAGTATTATGTTTGAGGTCAGGGTCAACTATACATTTGGTGCATAATTTAGAACAAGGACCAGCTCAAAATTGTTTTCTTCTTGTTTCCATTTAACTTCTTAATTTTTCTTATAACTCTCCTTGGCAGACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAA-CCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACAC-TTCCTCGGAATT</genome_strand>
        <mrna_strand>AATTGGGCGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGTCGATGGCTAATGCCAACCCCCAAAATCTCTCTCAAGGACTTCCGATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCCAACTCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGAGGAGGTTCCTGTTTCGGTCCCAGTAAAGACCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGGAAGTGCCGGAGAAATTGGTTGACTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGTTGGTTCCGATGAACCCCTCCGTTTTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTATCAACAAAGAGGATGGAACTGATAATCAGAAAAAAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAGTTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTAAAGAGACGGAGCATGCAAGGTATGGCAGTGCGGCCATCACTCCCACTTCAAGTGGATACTACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCCATTGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTTTCTCGGGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E725846" ref_strand="+" ref_description="SGN-E725846 [LA08CA02]">
      <seq>aattgggcgaaaatggtggcactatcactgtacaagggaaatctccacagagtacctgaaactccacggcgatggctagtgccaacccccaaaatctctcataaggacttccaatgtctcctccgtcgccggtcccgagccctctctcgcctccaaaatcctcccgatgtctctcctaccaccgccaccgcttcaaaccctaaccctaacctcaaaactgataccaaatccaaacctgaggatgaggttcctgtttcgattccagtgaagatcgagaaggaggaagaggatgttcgagtggagaatgtgaaagagccggagaaattggttgattcatctgctgtcgtggttgaacctaagcttgaggttttggaaaacgatcagaaattggagggtcaggtgaatccctctggtgtggagactagcaacaaagaggatgcaactgataatcagaaaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94376" stop="100946"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94676" g_stop="95095" g_length="420"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="420" r_length="420" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95096" i_stop="100536" i_length="5441">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100537" g_stop="100644" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="528" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100781" g_stop="100790" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="538" r_length="10" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E725846" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>538</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E725846" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94676" e_stop="95095"/>
          <exon e_start="100537" e_stop="100644"/>
          <exon e_start="100781" e_stop="100790"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGGGCGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAGGTATTGAATTGCAATTATTGATCTATTTTGTTTGTATGGTGTTATCCATGGATTTTGCTGGCTTTAGTTATGATTCGCTTATGCATCTTTCTGTTTTCTCTTAGTAAGGAAGGGATCCCAGCCAATTCAGGGTAGAAGTTAAGGGTGTGTATACCTTACGAAGCTTTTTACCCTTTTTGCGATGAGGCTGCTCCAAGTCTGGACTCTCCAACCATGACCTACAGCTTTTCCTCATTTTTGTTTATTATGTTTAGGAATTCTTAATATATGTCAATAAAAAAATATGTATCAGATGATTTGTAAGAACTAATACTGTTTATTTCTATGGAAGAGCGTAATGATATATGTGTAGTTGGTTTAAGACTAGCATTTTTTTAGCAGAAGCGTCATGTACTGATTAGAGATGAGGAGGTATATTTGCCTGAGGGTTGGGATACTTACATTAGATCTGTTCGGGGGATACTGCTTTCAGAAATTAAGGATAAATGGAGAGACAGTGAATGCTACATGCTACATTGGATTTATGGAGATAGGGAGAAGAGTCGTTCTTTCCGTATAGGGTGCCCATGAAGGTGTGTTTCCTTGCTTGATTAGGGGCGGGTGAAGTGATATTGATGGCTGAGAACATGAGATAGAAAAGGAGCACCTATGTTGGTGTTACATCTACAGATGTTTGGGTGAATACGTAGACCTGTCTCCTGTTACATTTTCAGGTGGTTGTGCACTCATTGTTGGCAATTCTGAATCGTTTGGTGGATACATGAGTATTTGTCAGAGTTTCTCTATATCGGAAGCAATCTGTAATTCCAGACTTTTCACCTACTCGTTTAACCGGAACCCAACATACTAAATTTAAGAGAATATCAAATATGAAGTCGGTCGCTTTCACAAAACTTTAGACGTTCCCAGTTACTTCTTTACTGACACAAGCCAAAACCAAATTTACAAGACCGACACAAGGAGGAAAACTCTAGGATTTAAGCAAAATAATATACTATATTAGTCTAAATAGAATGATGTCCCATGCGAGGTAAGTGCGGAGCTTGTTAGCTCTGTGACTCTGTATGAGTCAAAGTGTCACCCTTAAATGAATTATCTTTGGGGGGGGGGGAGGAGTTGGATTCAGTTGCACTAATTGCGTGAGTAATAACATCAACCATACATTTTATATGGAGCAGGTATACATAAGGAATCATGCAATTTATAAGATCCTCAACTATGTCCTACTTAAATCAATATAGCCTAAGTTGCTCGGGTGTGGTTTCCGATAATGCGGACCTAGAGCTCAAATCCTATATGATCTAAATTTTTAGATTTGGGTATATGGATCCATGTATGGATATGGGAGCGGGGGTTCGGCTAAAAATAATTCAAATAGCTAAAAATAGAGTTATAAAGCCTAAGTTATGAGATATTATATGGACGTCTTGAGATGAAAATGTTGATCAAGAGGAGAAAGAGATAAAAGGAAAAAGAGTGACAATAGAAATTAATATATCCAAGGTATTTCATTTCTTCAATTTCACCTTAATTTTTGTTTTGCGCATATAAATCATTGAATCTGTCCAAATTTCTCCCTCAAATTTGGTTTAAGTATCCCAAATTGGTTGACCATATCGTTTACGGATGCCACACCATCACTCACACCCGTTTCGTGTCGACATGGGTGCGAGAACAAAGGCGAAGAGTCCGTGCAACTTAGGATATAACCATTGTTGTGAAAAGCGCAGAAAAAGCGCGCTTCAAAGCGACACGACCCTTGTGCGCTTTTTTATCTTGAGGCGAGGCGATCTGAAGAAAACTCTCGCTTCAGATGAAGAAGCGACCCTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAAAAGCGACAATTAGTTTTTTTTTAATAAAAAAATTAGGTTTTTTTTTATAAAAAAATCTGAAATATAACCTTCTCTCTCCTCACGACTCTTTTCCTTCTTTCTCTTCTCGCAACTCTTCTTTCACAACACTTCTTTCCCTTCTTTCTCTCCTCGCAGCTCTTCTTTCACAATACTTCTTTCCCTTCTTTCTCTCCTGACGATCTCGACTGAGTCTGCCTCTTTCTTCAACCTCGACTGTAGGTAACTTTTTGTTCATCTCTTTTTTAGCTAATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATCAATCTTTGCCTGTGCTTCATCTCTTCATCTCTCTGAGTTTCAACTACTCTAGTTTTTTCTTCTTCTTCTCTTCTTTTCTTCATCTCTGCTGCTTGCTCTGTTTCTAATTACTGACTGCTGCCTCCTCTGTTTTTTTTTTCTTCAATTCTTTTGCTTTTTTTTATTTTTTTATTTTGTGATCAGTCTAGCAGCCTTGTTGAAGAATAGGAGTTTGAATCTTTGTGACTTAATTATATTTTTGATTTTTTGCTTTATATGTTATGACTTATGAGTATTTTTGCCTATGTAATTTCTTTCAATCTAAGACTATATTACCTCTATTTAGTTATTTAATATTTTTTATTTTTATACTAAATGTCGCTTTTTTTTTCTAAAAAAAAGCGCGCTTCGCTTCTGTGAAGCAAGCCTTCGTAGCTTTTTTCCGCTTCTCGCTTCCCAAAACACGGATATAACAATTCGTGTGTGAAATAAATGATCAAAATGGATGAAAATATACATTTTAGATCCATTTATCCTTTTCTACTTAATATCCTTATATAGTGGGAGATACATTAACCAAAATCGATGTAAATTTGGACACCACAAGTCTATCATGGCTTTCTGACTATCCCATCAGCTAGGTTCCCTTCTAGAGGGCTCAAGTGTGATATTCATATTACTGGTTCTTTCCTGCTAGTATAGGAAAATATTATACAAGGTGCGACCATGTCTAGTGACCTCAACGTTAGATGATAGTGATCTAGCAAAGCTTACTCCTGAAGTATCTTCCTTACAACAACAACATACCCAGTATGATCCCACATAGTTAGGGTCTAGGGAAGGTAGAGTTTACACAGAACTTAACCCTACCTCAGAGGTATTGAAGTATCTTCCATATAAGACAAAATGTTGTCATATTTTTTTGTGTTAAGAATTTATTCCAATAGTATATATAGCAACTAGGTTTAAGGATAATCAATATGTCAAAGTCATTATAAAGATGATTTTGTACATTTCCAATTGTGGACCATACTTTCACTTGTTCGTGTGCAGGTAATCGATTTGTTTTTTATAAATCGTTTCAATGCAAGAATACAAACTCAAAATTATGCTATAATTGAAATTCAACTATGAAAGAATTATAACTCATAGTACTATTGCTGAAAACTCCAATTTGATAATTGCGTCGTCAAAGTATCAAATATCTTATAATAGGTCATAACTTTGTATCTTAATCATTCATAGAACTTGTGAAATTCCATGTTTTTAGCAATAAGATCTCAATTTCCCAATTCGACTCTAACATTAACTCTTAACATTAAGTCGATGTGGGTTTATTAGTTTGGCTGTATTCTCCATTCTAAAAAAAGTTTATCAGGAATCCTAAATAGCAAATGATGAAACTGCTAGTTCAAGAATAAAGACAAAACTTGTGTTTATATCATGTTACTCCGAGCCAACTTTAAATAAAGTGTTGTCTTAGCAGTTAGCACCGTTTCGGGAAAAATATATTTTCGATCATCAAGTTTGAAACCTAAATCAACTTCTTCCCCAAATTGAAAGCTTCTTTAAAATTCCAGATTATTGCCTCCTCAAATCTCCATTTATGAACAAGGTATTTTAACTTTTGATATAATGTTGAATCTAGTGCTGAATACCTCATTAATTTAAGGTCGCTTCACTCCTATTTCCTACTGTTTTATACCCTAAAGAAGAATTTAGTTAGTTGAATATGGTTTTAAAGAGTGACCTGAATTGTGATTACAGCAAAAAAATTTGCTTCTTCTCCTTTAGCTTGTGCTTAGGTTTTAAAGGTAGTAACTTCTATTTATGATCTTGAAGTTCTTCTTATTTTTTTTTTTGCTTTCTTGCTTCCTTTCCTTTTTTTTTCCTTCTTTCCTGTAGCTCTTGTTTCCCCCTTGCGAAATGCTGTTGGAAAGCTTCCTCTTAAAACCAGTGCTGCTGGCTTTTGTCTCTATTGCCAACCGCTCCTCTTCTTTTTTTCTCCTTTTTTAATAGCCGACGGGTCAAGGATAATGGGCTGGCTATTTTAGTTACTCGCTTATTTTAAATGTGCCAAGTCCAATTCTTTAAGTCATTACACACGTTGTGGGTCAGTGGTTATTTGGTCTCTTTTTTATGGTCCTATCCATTCATCTCGACATGAGCTAGTTTTTGGGGTTGAGTTATGCCGTGGTCCAATTCTTTGTCATGGTACCATAGTCAAGTCCATCCCAATTCATGTTTACCTGATGTTGGGCCTCCCATCTTATATTTTCTTCGCTCCAAAGGTTCAACCTTGAGCGCGTGCGACCGGGGTGGGTGGGTAGGGGGTTGGGGTTAAGGTTACCTAGTCTTTATATGATGTGGGCAATTCTTCCCTCATGAGCTAGCTTTAGGATTGAGTTAGACCCAAGGTTGTTTTTTATTTCAGAAGGTGAACAAGAAGATCGAAGGCGTCGGATGATGCTCCATTAGCCTTTATGTGGGTTATATTGAAAGAGAAAAAATAGGATAACATTTGAAGGGGTTGACAATGACTCTGTTAAATTAAAAAAGTAGCCTCTTGTGTATGATATCTCTTTGGTGTACCTATGAGGTTCCTATTTGTGTAGAAGACCGGATATCTTCTGTTGAGAACCATACATTTGTTTAGGTTTCTATACTTTTTGATATTTGACTTGTATTACCGATTTCCCATCATTGATAGTATTGCTTATTAAATTAATGAAAAAGGAGAAATGGTAAATGAAATTGCCTTATTGAATATATGACAGCTGTTTGAATAGTGCTAATTATGTCGTACACATTTTGATTGAACAGCCTCATTAGCTGCAAAGGCACAATATCTTATGCTAATGCCTTCCTTTTCCTCTTCATTCTTATTTGCTGTCCGTTGGTACCTCTGTTCTTCTCTTACCTCTTATTTGTGCATTCATTCATCTGTATATTATATGTTATTTGGCAGTTGATCCTCTTCTAAAATTTACCAAAAATTGATTAGCCTAGTTCTCTTGACATGGCTCATTGTAGATTATAGTGAATCCTCATATTTATGTCTGAATATATTTTCCCAACTGCCAATGTGGTTAGCAGAGAGCGATAGGATGGGGTTGGAAGGCATCTGATATGCAAAATATATGATTATATAAGTATTATGTTTGAGGTCAGGGTCAACTATACATTTGGTGCATAATTTAGAACAAGGACCAGCTCAAAATTGTTTTCTTCTTGTTTCCATTTAACTTCTTAATTTTTCTTATAACTCTCCTTGGCAGACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATG</genome_strand>
        <mrna_strand>AATTGGGCGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E705492" ref_strand="+" ref_description="SGN-E705492 [FA27BC03]">
      <seq>attgggcgaaaatggtggcactatcactgtacaagggaaatctccacagagtacctgaaactccacggcgatggctagtgccaacccccaaaatctctcataaggacttccaatgtctcctccgtcgccggtcccgagccctctctcgcctccaaaatcctcccgatgtctctcctaccaccgccaccgcttcaaaccctaaccctaacctcaaaactgataccaaatccaaacctgaggatgaggttcctgtttcgattccagtgaagatcgagaaggaggaagaggatgttcgagtggagaatgtgaaagagccggagaaattggttgattcatctgctgtcgtggttgaacctaagcttgaggttttggaaaacgatcagaaattggagggtcaggtgaatccctctggtgtggagactagcaacaaagaggatgcaactgataatcagaaaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcgtttgagcagtacatcaccatcttcagattctcaactgaggaagaccccctataatgtggttcctctcgcttcacgatctgttggagttactgttagtccttcacgggttgcacctccgggacagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94377" stop="104267"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94677" g_stop="95095" g_length="419"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="419" r_length="419" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95096" i_stop="100536" i_length="5441">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100537" g_stop="100644" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="527" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100781" g_stop="101056" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="528" r_stop="803" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103900" g_stop="103967" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="804" r_stop="871" r_length="68" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E705492" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>871</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E705492" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94677" e_stop="95095"/>
          <exon e_start="100537" e_stop="100644"/>
          <exon e_start="100781" e_stop="101056"/>
          <exon e_start="103900" e_stop="103967"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGGGCGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAGGTATTGAATTGCAATTATTGATCTATTTTGTTTGTATGGTGTTATCCATGGATTTTGCTGGCTTTAGTTATGATTCGCTTATGCATCTTTCTGTTTTCTCTTAGTAAGGAAGGGATCCCAGCCAATTCAGGGTAGAAGTTAAGGGTGTGTATACCTTACGAAGCTTTTTACCCTTTTTGCGATGAGGCTGCTCCAAGTCTGGACTCTCCAACCATGACCTACAGCTTTTCCTCATTTTTGTTTATTATGTTTAGGAATTCTTAATATATGTCAATAAAAAAATATGTATCAGATGATTTGTAAGAACTAATACTGTTTATTTCTATGGAAGAGCGTAATGATATATGTGTAGTTGGTTTAAGACTAGCATTTTTTTAGCAGAAGCGTCATGTACTGATTAGAGATGAGGAGGTATATTTGCCTGAGGGTTGGGATACTTACATTAGATCTGTTCGGGGGATACTGCTTTCAGAAATTAAGGATAAATGGAGAGACAGTGAATGCTACATGCTACATTGGATTTATGGAGATAGGGAGAAGAGTCGTTCTTTCCGTATAGGGTGCCCATGAAGGTGTGTTTCCTTGCTTGATTAGGGGCGGGTGAAGTGATATTGATGGCTGAGAACATGAGATAGAAAAGGAGCACCTATGTTGGTGTTACATCTACAGATGTTTGGGTGAATACGTAGACCTGTCTCCTGTTACATTTTCAGGTGGTTGTGCACTCATTGTTGGCAATTCTGAATCGTTTGGTGGATACATGAGTATTTGTCAGAGTTTCTCTATATCGGAAGCAATCTGTAATTCCAGACTTTTCACCTACTCGTTTAACCGGAACCCAACATACTAAATTTAAGAGAATATCAAATATGAAGTCGGTCGCTTTCACAAAACTTTAGACGTTCCCAGTTACTTCTTTACTGACACAAGCCAAAACCAAATTTACAAGACCGACACAAGGAGGAAAACTCTAGGATTTAAGCAAAATAATATACTATATTAGTCTAAATAGAATGATGTCCCATGCGAGGTAAGTGCGGAGCTTGTTAGCTCTGTGACTCTGTATGAGTCAAAGTGTCACCCTTAAATGAATTATCTTTGGGGGGGGGGGAGGAGTTGGATTCAGTTGCACTAATTGCGTGAGTAATAACATCAACCATACATTTTATATGGAGCAGGTATACATAAGGAATCATGCAATTTATAAGATCCTCAACTATGTCCTACTTAAATCAATATAGCCTAAGTTGCTCGGGTGTGGTTTCCGATAATGCGGACCTAGAGCTCAAATCCTATATGATCTAAATTTTTAGATTTGGGTATATGGATCCATGTATGGATATGGGAGCGGGGGTTCGGCTAAAAATAATTCAAATAGCTAAAAATAGAGTTATAAAGCCTAAGTTATGAGATATTATATGGACGTCTTGAGATGAAAATGTTGATCAAGAGGAGAAAGAGATAAAAGGAAAAAGAGTGACAATAGAAATTAATATATCCAAGGTATTTCATTTCTTCAATTTCACCTTAATTTTTGTTTTGCGCATATAAATCATTGAATCTGTCCAAATTTCTCCCTCAAATTTGGTTTAAGTATCCCAAATTGGTTGACCATATCGTTTACGGATGCCACACCATCACTCACACCCGTTTCGTGTCGACATGGGTGCGAGAACAAAGGCGAAGAGTCCGTGCAACTTAGGATATAACCATTGTTGTGAAAAGCGCAGAAAAAGCGCGCTTCAAAGCGACACGACCCTTGTGCGCTTTTTTATCTTGAGGCGAGGCGATCTGAAGAAAACTCTCGCTTCAGATGAAGAAGCGACCCTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAAAAGCGACAATTAGTTTTTTTTTAATAAAAAAATTAGGTTTTTTTTTATAAAAAAATCTGAAATATAACCTTCTCTCTCCTCACGACTCTTTTCCTTCTTTCTCTTCTCGCAACTCTTCTTTCACAACACTTCTTTCCCTTCTTTCTCTCCTCGCAGCTCTTCTTTCACAATACTTCTTTCCCTTCTTTCTCTCCTGACGATCTCGACTGAGTCTGCCTCTTTCTTCAACCTCGACTGTAGGTAACTTTTTGTTCATCTCTTTTTTAGCTAATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATCAATCTTTGCCTGTGCTTCATCTCTTCATCTCTCTGAGTTTCAACTACTCTAGTTTTTTCTTCTTCTTCTCTTCTTTTCTTCATCTCTGCTGCTTGCTCTGTTTCTAATTACTGACTGCTGCCTCCTCTGTTTTTTTTTTCTTCAATTCTTTTGCTTTTTTTTATTTTTTTATTTTGTGATCAGTCTAGCAGCCTTGTTGAAGAATAGGAGTTTGAATCTTTGTGACTTAATTATATTTTTGATTTTTTGCTTTATATGTTATGACTTATGAGTATTTTTGCCTATGTAATTTCTTTCAATCTAAGACTATATTACCTCTATTTAGTTATTTAATATTTTTTATTTTTATACTAAATGTCGCTTTTTTTTTCTAAAAAAAAGCGCGCTTCGCTTCTGTGAAGCAAGCCTTCGTAGCTTTTTTCCGCTTCTCGCTTCCCAAAACACGGATATAACAATTCGTGTGTGAAATAAATGATCAAAATGGATGAAAATATACATTTTAGATCCATTTATCCTTTTCTACTTAATATCCTTATATAGTGGGAGATACATTAACCAAAATCGATGTAAATTTGGACACCACAAGTCTATCATGGCTTTCTGACTATCCCATCAGCTAGGTTCCCTTCTAGAGGGCTCAAGTGTGATATTCATATTACTGGTTCTTTCCTGCTAGTATAGGAAAATATTATACAAGGTGCGACCATGTCTAGTGACCTCAACGTTAGATGATAGTGATCTAGCAAAGCTTACTCCTGAAGTATCTTCCTTACAACAACAACATACCCAGTATGATCCCACATAGTTAGGGTCTAGGGAAGGTAGAGTTTACACAGAACTTAACCCTACCTCAGAGGTATTGAAGTATCTTCCATATAAGACAAAATGTTGTCATATTTTTTTGTGTTAAGAATTTATTCCAATAGTATATATAGCAACTAGGTTTAAGGATAATCAATATGTCAAAGTCATTATAAAGATGATTTTGTACATTTCCAATTGTGGACCATACTTTCACTTGTTCGTGTGCAGGTAATCGATTTGTTTTTTATAAATCGTTTCAATGCAAGAATACAAACTCAAAATTATGCTATAATTGAAATTCAACTATGAAAGAATTATAACTCATAGTACTATTGCTGAAAACTCCAATTTGATAATTGCGTCGTCAAAGTATCAAATATCTTATAATAGGTCATAACTTTGTATCTTAATCATTCATAGAACTTGTGAAATTCCATGTTTTTAGCAATAAGATCTCAATTTCCCAATTCGACTCTAACATTAACTCTTAACATTAAGTCGATGTGGGTTTATTAGTTTGGCTGTATTCTCCATTCTAAAAAAAGTTTATCAGGAATCCTAAATAGCAAATGATGAAACTGCTAGTTCAAGAATAAAGACAAAACTTGTGTTTATATCATGTTACTCCGAGCCAACTTTAAATAAAGTGTTGTCTTAGCAGTTAGCACCGTTTCGGGAAAAATATATTTTCGATCATCAAGTTTGAAACCTAAATCAACTTCTTCCCCAAATTGAAAGCTTCTTTAAAATTCCAGATTATTGCCTCCTCAAATCTCCATTTATGAACAAGGTATTTTAACTTTTGATATAATGTTGAATCTAGTGCTGAATACCTCATTAATTTAAGGTCGCTTCACTCCTATTTCCTACTGTTTTATACCCTAAAGAAGAATTTAGTTAGTTGAATATGGTTTTAAAGAGTGACCTGAATTGTGATTACAGCAAAAAAATTTGCTTCTTCTCCTTTAGCTTGTGCTTAGGTTTTAAAGGTAGTAACTTCTATTTATGATCTTGAAGTTCTTCTTATTTTTTTTTTTGCTTTCTTGCTTCCTTTCCTTTTTTTTTCCTTCTTTCCTGTAGCTCTTGTTTCCCCCTTGCGAAATGCTGTTGGAAAGCTTCCTCTTAAAACCAGTGCTGCTGGCTTTTGTCTCTATTGCCAACCGCTCCTCTTCTTTTTTTCTCCTTTTTTAATAGCCGACGGGTCAAGGATAATGGGCTGGCTATTTTAGTTACTCGCTTATTTTAAATGTGCCAAGTCCAATTCTTTAAGTCATTACACACGTTGTGGGTCAGTGGTTATTTGGTCTCTTTTTTATGGTCCTATCCATTCATCTCGACATGAGCTAGTTTTTGGGGTTGAGTTATGCCGTGGTCCAATTCTTTGTCATGGTACCATAGTCAAGTCCATCCCAATTCATGTTTACCTGATGTTGGGCCTCCCATCTTATATTTTCTTCGCTCCAAAGGTTCAACCTTGAGCGCGTGCGACCGGGGTGGGTGGGTAGGGGGTTGGGGTTAAGGTTACCTAGTCTTTATATGATGTGGGCAATTCTTCCCTCATGAGCTAGCTTTAGGATTGAGTTAGACCCAAGGTTGTTTTTTATTTCAGAAGGTGAACAAGAAGATCGAAGGCGTCGGATGATGCTCCATTAGCCTTTATGTGGGTTATATTGAAAGAGAAAAAATAGGATAACATTTGAAGGGGTTGACAATGACTCTGTTAAATTAAAAAAGTAGCCTCTTGTGTATGATATCTCTTTGGTGTACCTATGAGGTTCCTATTTGTGTAGAAGACCGGATATCTTCTGTTGAGAACCATACATTTGTTTAGGTTTCTATACTTTTTGATATTTGACTTGTATTACCGATTTCCCATCATTGATAGTATTGCTTATTAAATTAATGAAAAAGGAGAAATGGTAAATGAAATTGCCTTATTGAATATATGACAGCTGTTTGAATAGTGCTAATTATGTCGTACACATTTTGATTGAACAGCCTCATTAGCTGCAAAGGCACAATATCTTATGCTAATGCCTTCCTTTTCCTCTTCATTCTTATTTGCTGTCCGTTGGTACCTCTGTTCTTCTCTTACCTCTTATTTGTGCATTCATTCATCTGTATATTATATGTTATTTGGCAGTTGATCCTCTTCTAAAATTTACCAAAAATTGATTAGCCTAGTTCTCTTGACATGGCTCATTGTAGATTATAGTGAATCCTCATATTTATGTCTGAATATATTTTCCCAACTGCCAATGTGGTTAGCAGAGAGCGATAGGATGGGGTTGGAAGGCATCTGATATGCAAAATATATGATTATATAAGTATTATGTTTGAGGTCAGGGTCAACTATACATTTGGTGCATAATTTAGAACAAGGACCAGCTCAAAATTGTTTTCTTCTTGTTTCCATTTAACTTCTTAATTTTTCTTATAACTCTCCTTGGCAGACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTGGTAAGTGCCCTATCTATGCGTGCATTGTTACCTTTGGCTTTCATTTGTGGCGCTACACCACCAGGAGTGGAAAAAGAGGGCTTTAATTTTTGTTTCTAATATAATTAATCTAGCAAAGATTTAAAAAGTTTTAAGTAAAGCAACAACATTCAATATGTGCAAGACTGCAAGTTAGTTCATCATATTATTGCTGGTTCACTCCCTTGAACCAAGTCTTCTATTTATCTTCTTCCTCAATGGAGCAGATCTTAATTTTTCTTTCATAGAACCATGTCCAAGGCATCTCGAAATGTGTGCTCTTGGTAACATTTGCTGAAAATTAAGGACCCCATATTGAACTTCTATTGGACATGAGATTTTGTTACAATTGTGTCTCTGTAACTAGTTTTGAGCTGTTCCAATCATTTTCTGCCACTTGTTGGACTAATTGGACCTTGCAATAAATTATGTTGCTACTTTGCACATGCCATAATAAGGGTTAGTGCTTTGACTAAGGGAAGATGATATATGTATATATATATATATGTATATATATATATATTATCTTGTTGTTGCATCAATGGAGAAGTTTATGTGCTATTTTACCTTGTTAATACTAGTTGTAAGAGCAAAAATTACTTTGTGGCCATTTTCTTCAGTGCAAACTGGGAATCAACATGTGGGATGAGGGATTATTGGAGTTATATATCAGCCTTCAACCACTTCCCCTTGATGTGAAATTTTCAGTCCCCTTTCTTTGTGAATAATGGAGTTCCAGAGAATGTACGATGTTCGGAGACTTGAACCAAGAGGTGCATCCTTAGATTACGTTAGGGCAATTAAATACATGTACTATGGAGCAAGGAAACTCAGATCACTTCTCGTTGTGATGGGGTTGCACCAGGGATCGACACATAGCCCATTTCTAGTTACTAACACGACTTATCCTAGGAAAAGTCCATGATATATGCTCTTTGCAGATGACAATGTGGTAATGAGACCAGGACAGAGTTAACAATAGGTGCCTTAACAATATATTGGAAATTTGAGGACAGACGTTGGAGTATAAAGAGTCTGGGTTGAGTAGGACTTAGACAAAATACTTGAAGTTCAAGTTCAATGACGTAAAACACATGGTAGATGTGGAAGTAAGGATTGAAACAAGCAGGGATCAATGATTCAGGAAAATAAGGAGATAGACGAAGATGTTACACATTGTATTGGAGCAGGTGGATGACGTTCACTGTCTTTTATGATAAGATTGTACCACCAAAGCCTTAAGGTAGGTATTACAAAGTGGTGGTCAGACTAGCTATGGACAGAGTGTTGACTAGACAAGAACTCGCATGTATAGAAGATGAGAGTAGTAGAAATGAGAATGTTGAGTTGGATGTTTGGGCATACTAAGATTGAGATTAGGAATGAAGCTATACGCGACATTGTGGGATAGGGCGCCTTGGTGAACAAGATGAGGCATGTGAAGCTGAGATGGTTCGAACATGTGAAGGAAACATGCATGAATACCCCGATTAGGAGCGAGAGGTTGGCTATAGAGGATGTAACATGATGTAGAGGTAGACCGAGAAGTCTCAAAAGAAATGATTAGATAGGACATGACTCATGCAGCTTACCTTTATGAGGACATGACCTTGGCCCTAGATAGGAAGATATGGCGGTCAAAAATTAGGGTAGAAGGTCAGTAGGTCGAACATTGTCTTGTTCTCTCTTACTGTCTTATTCGATTTTAGTATTACATGATTTTTCATTTGCTAACAGCTACCGTTATTTTAAATTTTTTGGTGTTGCTATTGCTCTCTTTATTGATTTCAGCATGACTTTGATTTTAGGATTACATTATTGTATTTGCTTTGCATACTTGTTTTTTATATGCTTTACCTGTGTCGTTTATCTGGTAGATACAACCTCTCTACCTTTCAAAAGGTAGGGGTAAGGCCGTGTACACACCATCCTCCTCAGACCCCACTTGTGGGATTATAACTGGCCCAGTTGAGCTGGGTATGTTTTTATTGGATCTCCAGATGAAGACCAGACAATACTTTTCTTGACAAATTGCTTTACGTGGAAGGCTGCTGATACTGCATTAGTTGCTTACATTTGGTTTTCACTAGACATCTTTTTCATATTATACATAAATATGCAGGCTACACTAGAAACTACTATATAGAATTGGATAATCCGTAGTGAATAAATTTATCTTGGGTCTGTTTTGTTTTCTCACTCCATGTAGCATGGGCACTTTATTAGATACATATTCAAGTATAGTTTAAGGCTCCACCTGCAAGGACTTTTTTAACTTTAACTTCTTCCAATTTTTGCAAAGTGGACTATTTGTTAAATCAAAAGTAGATATATATTAGCAGCTTCAAAAAAAAAAAGTAGATGTATATTAGAATCTAGCTATTAGTAGTCCTTTGTAATTATAATGATGAACAACAATATATTTTCCTAATCATATGTTAGTCGACTTACTAGTTAATTAACTAAATAGTTCTTATTGTATCCTCAGGCTACGTTCCTTTGAGGTCTACTTTGATATATAGGGTGAAATGGTAGGGCAAAGTGACAAGACACTGAAGAAAACAGCTATAAGAAGAAAAGATATGAAAGCAGATGAAGAATTAGTTCTCATAAACCAGTTAAAAAAAAGTCATGAGATTACCATTAAGTAGCTTATCTAGTAAAATTTGAGTCAGGGAGCAGGGAGCTGAACTATACACCACAGATAAAAATCAGTTCATAAAAAATTCAGCCAATTGGTTTATGAGAAAACTAATTCTTAAATAGTATGTAATAAATTTCACTAGTTCAAGAAATCCATTCTCACTTGCTGTCTATTTTTTCAGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCA</genome_strand>
        <mrna_strand>ATTGGGCGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGGTTGCACCTCCGGGACAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E554092" ref_strand="+" ref_description="SGN-E554092 [cTSC-3-D15]">
      <seq>attgggcgaaaatggtggcactatcactgtacaagggaaatctccacagagtacctgaaactccacggcgatggctagtgccaacccccaaaatctctcataaggacttccaatgtctcctccgtcgccggtcccgagccctctctcgcctccaaaatcctcccgatgtctctcctaccaccgccaccgcttcaaaccctaaccctaacctcaaaactgataccaaatccaaacctgaggatgaggttcctgtttcgattccagtgaagatcgagaaggaggaagaggatgttcgagtggagaatgtgaaagagccggagaaattggttgattcatctgctgtcgtggttgaacctaagcttgaggttttggaaaacgatcagaaattggagggtcaggtgaatccctctggtgtggagactagcaacaaagaggatgcaactgataatcagaaaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcgtttgagcagtacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94377" stop="101312"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94677" g_stop="95095" g_length="419"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="419" r_length="419" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95096" i_stop="100536" i_length="5441">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100537" g_stop="100644" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="527" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100781" g_stop="101012" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="528" r_stop="759" r_length="232" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E554092" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>759</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E554092" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94677" e_stop="95095"/>
          <exon e_start="100537" e_stop="100644"/>
          <exon e_start="100781" e_stop="101012"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGGGCGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAGGTATTGAATTGCAATTATTGATCTATTTTGTTTGTATGGTGTTATCCATGGATTTTGCTGGCTTTAGTTATGATTCGCTTATGCATCTTTCTGTTTTCTCTTAGTAAGGAAGGGATCCCAGCCAATTCAGGGTAGAAGTTAAGGGTGTGTATACCTTACGAAGCTTTTTACCCTTTTTGCGATGAGGCTGCTCCAAGTCTGGACTCTCCAACCATGACCTACAGCTTTTCCTCATTTTTGTTTATTATGTTTAGGAATTCTTAATATATGTCAATAAAAAAATATGTATCAGATGATTTGTAAGAACTAATACTGTTTATTTCTATGGAAGAGCGTAATGATATATGTGTAGTTGGTTTAAGACTAGCATTTTTTTAGCAGAAGCGTCATGTACTGATTAGAGATGAGGAGGTATATTTGCCTGAGGGTTGGGATACTTACATTAGATCTGTTCGGGGGATACTGCTTTCAGAAATTAAGGATAAATGGAGAGACAGTGAATGCTACATGCTACATTGGATTTATGGAGATAGGGAGAAGAGTCGTTCTTTCCGTATAGGGTGCCCATGAAGGTGTGTTTCCTTGCTTGATTAGGGGCGGGTGAAGTGATATTGATGGCTGAGAACATGAGATAGAAAAGGAGCACCTATGTTGGTGTTACATCTACAGATGTTTGGGTGAATACGTAGACCTGTCTCCTGTTACATTTTCAGGTGGTTGTGCACTCATTGTTGGCAATTCTGAATCGTTTGGTGGATACATGAGTATTTGTCAGAGTTTCTCTATATCGGAAGCAATCTGTAATTCCAGACTTTTCACCTACTCGTTTAACCGGAACCCAACATACTAAATTTAAGAGAATATCAAATATGAAGTCGGTCGCTTTCACAAAACTTTAGACGTTCCCAGTTACTTCTTTACTGACACAAGCCAAAACCAAATTTACAAGACCGACACAAGGAGGAAAACTCTAGGATTTAAGCAAAATAATATACTATATTAGTCTAAATAGAATGATGTCCCATGCGAGGTAAGTGCGGAGCTTGTTAGCTCTGTGACTCTGTATGAGTCAAAGTGTCACCCTTAAATGAATTATCTTTGGGGGGGGGGGAGGAGTTGGATTCAGTTGCACTAATTGCGTGAGTAATAACATCAACCATACATTTTATATGGAGCAGGTATACATAAGGAATCATGCAATTTATAAGATCCTCAACTATGTCCTACTTAAATCAATATAGCCTAAGTTGCTCGGGTGTGGTTTCCGATAATGCGGACCTAGAGCTCAAATCCTATATGATCTAAATTTTTAGATTTGGGTATATGGATCCATGTATGGATATGGGAGCGGGGGTTCGGCTAAAAATAATTCAAATAGCTAAAAATAGAGTTATAAAGCCTAAGTTATGAGATATTATATGGACGTCTTGAGATGAAAATGTTGATCAAGAGGAGAAAGAGATAAAAGGAAAAAGAGTGACAATAGAAATTAATATATCCAAGGTATTTCATTTCTTCAATTTCACCTTAATTTTTGTTTTGCGCATATAAATCATTGAATCTGTCCAAATTTCTCCCTCAAATTTGGTTTAAGTATCCCAAATTGGTTGACCATATCGTTTACGGATGCCACACCATCACTCACACCCGTTTCGTGTCGACATGGGTGCGAGAACAAAGGCGAAGAGTCCGTGCAACTTAGGATATAACCATTGTTGTGAAAAGCGCAGAAAAAGCGCGCTTCAAAGCGACACGACCCTTGTGCGCTTTTTTATCTTGAGGCGAGGCGATCTGAAGAAAACTCTCGCTTCAGATGAAGAAGCGACCCTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAAAAGCGACAATTAGTTTTTTTTTAATAAAAAAATTAGGTTTTTTTTTATAAAAAAATCTGAAATATAACCTTCTCTCTCCTCACGACTCTTTTCCTTCTTTCTCTTCTCGCAACTCTTCTTTCACAACACTTCTTTCCCTTCTTTCTCTCCTCGCAGCTCTTCTTTCACAATACTTCTTTCCCTTCTTTCTCTCCTGACGATCTCGACTGAGTCTGCCTCTTTCTTCAACCTCGACTGTAGGTAACTTTTTGTTCATCTCTTTTTTAGCTAATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATCAATCTTTGCCTGTGCTTCATCTCTTCATCTCTCTGAGTTTCAACTACTCTAGTTTTTTCTTCTTCTTCTCTTCTTTTCTTCATCTCTGCTGCTTGCTCTGTTTCTAATTACTGACTGCTGCCTCCTCTGTTTTTTTTTTCTTCAATTCTTTTGCTTTTTTTTATTTTTTTATTTTGTGATCAGTCTAGCAGCCTTGTTGAAGAATAGGAGTTTGAATCTTTGTGACTTAATTATATTTTTGATTTTTTGCTTTATATGTTATGACTTATGAGTATTTTTGCCTATGTAATTTCTTTCAATCTAAGACTATATTACCTCTATTTAGTTATTTAATATTTTTTATTTTTATACTAAATGTCGCTTTTTTTTTCTAAAAAAAAGCGCGCTTCGCTTCTGTGAAGCAAGCCTTCGTAGCTTTTTTCCGCTTCTCGCTTCCCAAAACACGGATATAACAATTCGTGTGTGAAATAAATGATCAAAATGGATGAAAATATACATTTTAGATCCATTTATCCTTTTCTACTTAATATCCTTATATAGTGGGAGATACATTAACCAAAATCGATGTAAATTTGGACACCACAAGTCTATCATGGCTTTCTGACTATCCCATCAGCTAGGTTCCCTTCTAGAGGGCTCAAGTGTGATATTCATATTACTGGTTCTTTCCTGCTAGTATAGGAAAATATTATACAAGGTGCGACCATGTCTAGTGACCTCAACGTTAGATGATAGTGATCTAGCAAAGCTTACTCCTGAAGTATCTTCCTTACAACAACAACATACCCAGTATGATCCCACATAGTTAGGGTCTAGGGAAGGTAGAGTTTACACAGAACTTAACCCTACCTCAGAGGTATTGAAGTATCTTCCATATAAGACAAAATGTTGTCATATTTTTTTGTGTTAAGAATTTATTCCAATAGTATATATAGCAACTAGGTTTAAGGATAATCAATATGTCAAAGTCATTATAAAGATGATTTTGTACATTTCCAATTGTGGACCATACTTTCACTTGTTCGTGTGCAGGTAATCGATTTGTTTTTTATAAATCGTTTCAATGCAAGAATACAAACTCAAAATTATGCTATAATTGAAATTCAACTATGAAAGAATTATAACTCATAGTACTATTGCTGAAAACTCCAATTTGATAATTGCGTCGTCAAAGTATCAAATATCTTATAATAGGTCATAACTTTGTATCTTAATCATTCATAGAACTTGTGAAATTCCATGTTTTTAGCAATAAGATCTCAATTTCCCAATTCGACTCTAACATTAACTCTTAACATTAAGTCGATGTGGGTTTATTAGTTTGGCTGTATTCTCCATTCTAAAAAAAGTTTATCAGGAATCCTAAATAGCAAATGATGAAACTGCTAGTTCAAGAATAAAGACAAAACTTGTGTTTATATCATGTTACTCCGAGCCAACTTTAAATAAAGTGTTGTCTTAGCAGTTAGCACCGTTTCGGGAAAAATATATTTTCGATCATCAAGTTTGAAACCTAAATCAACTTCTTCCCCAAATTGAAAGCTTCTTTAAAATTCCAGATTATTGCCTCCTCAAATCTCCATTTATGAACAAGGTATTTTAACTTTTGATATAATGTTGAATCTAGTGCTGAATACCTCATTAATTTAAGGTCGCTTCACTCCTATTTCCTACTGTTTTATACCCTAAAGAAGAATTTAGTTAGTTGAATATGGTTTTAAAGAGTGACCTGAATTGTGATTACAGCAAAAAAATTTGCTTCTTCTCCTTTAGCTTGTGCTTAGGTTTTAAAGGTAGTAACTTCTATTTATGATCTTGAAGTTCTTCTTATTTTTTTTTTTGCTTTCTTGCTTCCTTTCCTTTTTTTTTCCTTCTTTCCTGTAGCTCTTGTTTCCCCCTTGCGAAATGCTGTTGGAAAGCTTCCTCTTAAAACCAGTGCTGCTGGCTTTTGTCTCTATTGCCAACCGCTCCTCTTCTTTTTTTCTCCTTTTTTAATAGCCGACGGGTCAAGGATAATGGGCTGGCTATTTTAGTTACTCGCTTATTTTAAATGTGCCAAGTCCAATTCTTTAAGTCATTACACACGTTGTGGGTCAGTGGTTATTTGGTCTCTTTTTTATGGTCCTATCCATTCATCTCGACATGAGCTAGTTTTTGGGGTTGAGTTATGCCGTGGTCCAATTCTTTGTCATGGTACCATAGTCAAGTCCATCCCAATTCATGTTTACCTGATGTTGGGCCTCCCATCTTATATTTTCTTCGCTCCAAAGGTTCAACCTTGAGCGCGTGCGACCGGGGTGGGTGGGTAGGGGGTTGGGGTTAAGGTTACCTAGTCTTTATATGATGTGGGCAATTCTTCCCTCATGAGCTAGCTTTAGGATTGAGTTAGACCCAAGGTTGTTTTTTATTTCAGAAGGTGAACAAGAAGATCGAAGGCGTCGGATGATGCTCCATTAGCCTTTATGTGGGTTATATTGAAAGAGAAAAAATAGGATAACATTTGAAGGGGTTGACAATGACTCTGTTAAATTAAAAAAGTAGCCTCTTGTGTATGATATCTCTTTGGTGTACCTATGAGGTTCCTATTTGTGTAGAAGACCGGATATCTTCTGTTGAGAACCATACATTTGTTTAGGTTTCTATACTTTTTGATATTTGACTTGTATTACCGATTTCCCATCATTGATAGTATTGCTTATTAAATTAATGAAAAAGGAGAAATGGTAAATGAAATTGCCTTATTGAATATATGACAGCTGTTTGAATAGTGCTAATTATGTCGTACACATTTTGATTGAACAGCCTCATTAGCTGCAAAGGCACAATATCTTATGCTAATGCCTTCCTTTTCCTCTTCATTCTTATTTGCTGTCCGTTGGTACCTCTGTTCTTCTCTTACCTCTTATTTGTGCATTCATTCATCTGTATATTATATGTTATTTGGCAGTTGATCCTCTTCTAAAATTTACCAAAAATTGATTAGCCTAGTTCTCTTGACATGGCTCATTGTAGATTATAGTGAATCCTCATATTTATGTCTGAATATATTTTCCCAACTGCCAATGTGGTTAGCAGAGAGCGATAGGATGGGGTTGGAAGGCATCTGATATGCAAAATATATGATTATATAAGTATTATGTTTGAGGTCAGGGTCAACTATACATTTGGTGCATAATTTAGAACAAGGACCAGCTCAAAATTGTTTTCTTCTTGTTTCCATTTAACTTCTTAATTTTTCTTATAACTCTCCTTGGCAGACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACAT</genome_strand>
        <mrna_strand>ATTGGGCGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E204426" ref_strand="+" ref_description="SGN-E204426 [cLEC-13-F18]">
      <seq>ttgggcgaaaatggtggcactatcactgtacaagggaaatctccacagagtacctgaaactccacggcgatggctagtgccaacccccaaaatctctcataaggacttccaatgtctcctccgtcgccggtcccgagccctctctcgcctccaaaatcctcccgatgtctctcctaccaccgccaccgcttcaaaccctaaccctaacctcaaaactgataccaaatccaaacctgaggatgaggttcctgtttcgattccagtgaagatcgagaaggaggaagaggatgttcgagtggagaatgtgaaagagccggagaaattggttgattcatctgctgtcgtggttgaacctaagcttgaggttttggaaaacgatcagaaattggagggtcaggtgaatccctctggtgtggagactagcaacaaagaggatgcaactgataatcagaaaagaaaggagattgaggataaattacaagttctgaatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94378" stop="100911"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94678" g_stop="95095" g_length="418"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="418" r_length="418" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95096" i_stop="100536" i_length="5441">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100537" g_stop="100611" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="493" r_length="75" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E204426" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>493</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E204426" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94678" e_stop="95095"/>
          <exon e_start="100537" e_stop="100611"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGGCGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAGGTATTGAATTGCAATTATTGATCTATTTTGTTTGTATGGTGTTATCCATGGATTTTGCTGGCTTTAGTTATGATTCGCTTATGCATCTTTCTGTTTTCTCTTAGTAAGGAAGGGATCCCAGCCAATTCAGGGTAGAAGTTAAGGGTGTGTATACCTTACGAAGCTTTTTACCCTTTTTGCGATGAGGCTGCTCCAAGTCTGGACTCTCCAACCATGACCTACAGCTTTTCCTCATTTTTGTTTATTATGTTTAGGAATTCTTAATATATGTCAATAAAAAAATATGTATCAGATGATTTGTAAGAACTAATACTGTTTATTTCTATGGAAGAGCGTAATGATATATGTGTAGTTGGTTTAAGACTAGCATTTTTTTAGCAGAAGCGTCATGTACTGATTAGAGATGAGGAGGTATATTTGCCTGAGGGTTGGGATACTTACATTAGATCTGTTCGGGGGATACTGCTTTCAGAAATTAAGGATAAATGGAGAGACAGTGAATGCTACATGCTACATTGGATTTATGGAGATAGGGAGAAGAGTCGTTCTTTCCGTATAGGGTGCCCATGAAGGTGTGTTTCCTTGCTTGATTAGGGGCGGGTGAAGTGATATTGATGGCTGAGAACATGAGATAGAAAAGGAGCACCTATGTTGGTGTTACATCTACAGATGTTTGGGTGAATACGTAGACCTGTCTCCTGTTACATTTTCAGGTGGTTGTGCACTCATTGTTGGCAATTCTGAATCGTTTGGTGGATACATGAGTATTTGTCAGAGTTTCTCTATATCGGAAGCAATCTGTAATTCCAGACTTTTCACCTACTCGTTTAACCGGAACCCAACATACTAAATTTAAGAGAATATCAAATATGAAGTCGGTCGCTTTCACAAAACTTTAGACGTTCCCAGTTACTTCTTTACTGACACAAGCCAAAACCAAATTTACAAGACCGACACAAGGAGGAAAACTCTAGGATTTAAGCAAAATAATATACTATATTAGTCTAAATAGAATGATGTCCCATGCGAGGTAAGTGCGGAGCTTGTTAGCTCTGTGACTCTGTATGAGTCAAAGTGTCACCCTTAAATGAATTATCTTTGGGGGGGGGGGAGGAGTTGGATTCAGTTGCACTAATTGCGTGAGTAATAACATCAACCATACATTTTATATGGAGCAGGTATACATAAGGAATCATGCAATTTATAAGATCCTCAACTATGTCCTACTTAAATCAATATAGCCTAAGTTGCTCGGGTGTGGTTTCCGATAATGCGGACCTAGAGCTCAAATCCTATATGATCTAAATTTTTAGATTTGGGTATATGGATCCATGTATGGATATGGGAGCGGGGGTTCGGCTAAAAATAATTCAAATAGCTAAAAATAGAGTTATAAAGCCTAAGTTATGAGATATTATATGGACGTCTTGAGATGAAAATGTTGATCAAGAGGAGAAAGAGATAAAAGGAAAAAGAGTGACAATAGAAATTAATATATCCAAGGTATTTCATTTCTTCAATTTCACCTTAATTTTTGTTTTGCGCATATAAATCATTGAATCTGTCCAAATTTCTCCCTCAAATTTGGTTTAAGTATCCCAAATTGGTTGACCATATCGTTTACGGATGCCACACCATCACTCACACCCGTTTCGTGTCGACATGGGTGCGAGAACAAAGGCGAAGAGTCCGTGCAACTTAGGATATAACCATTGTTGTGAAAAGCGCAGAAAAAGCGCGCTTCAAAGCGACACGACCCTTGTGCGCTTTTTTATCTTGAGGCGAGGCGATCTGAAGAAAACTCTCGCTTCAGATGAAGAAGCGACCCTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAAAAGCGACAATTAGTTTTTTTTTAATAAAAAAATTAGGTTTTTTTTTATAAAAAAATCTGAAATATAACCTTCTCTCTCCTCACGACTCTTTTCCTTCTTTCTCTTCTCGCAACTCTTCTTTCACAACACTTCTTTCCCTTCTTTCTCTCCTCGCAGCTCTTCTTTCACAATACTTCTTTCCCTTCTTTCTCTCCTGACGATCTCGACTGAGTCTGCCTCTTTCTTCAACCTCGACTGTAGGTAACTTTTTGTTCATCTCTTTTTTAGCTAATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATCAATCTTTGCCTGTGCTTCATCTCTTCATCTCTCTGAGTTTCAACTACTCTAGTTTTTTCTTCTTCTTCTCTTCTTTTCTTCATCTCTGCTGCTTGCTCTGTTTCTAATTACTGACTGCTGCCTCCTCTGTTTTTTTTTTCTTCAATTCTTTTGCTTTTTTTTATTTTTTTATTTTGTGATCAGTCTAGCAGCCTTGTTGAAGAATAGGAGTTTGAATCTTTGTGACTTAATTATATTTTTGATTTTTTGCTTTATATGTTATGACTTATGAGTATTTTTGCCTATGTAATTTCTTTCAATCTAAGACTATATTACCTCTATTTAGTTATTTAATATTTTTTATTTTTATACTAAATGTCGCTTTTTTTTTCTAAAAAAAAGCGCGCTTCGCTTCTGTGAAGCAAGCCTTCGTAGCTTTTTTCCGCTTCTCGCTTCCCAAAACACGGATATAACAATTCGTGTGTGAAATAAATGATCAAAATGGATGAAAATATACATTTTAGATCCATTTATCCTTTTCTACTTAATATCCTTATATAGTGGGAGATACATTAACCAAAATCGATGTAAATTTGGACACCACAAGTCTATCATGGCTTTCTGACTATCCCATCAGCTAGGTTCCCTTCTAGAGGGCTCAAGTGTGATATTCATATTACTGGTTCTTTCCTGCTAGTATAGGAAAATATTATACAAGGTGCGACCATGTCTAGTGACCTCAACGTTAGATGATAGTGATCTAGCAAAGCTTACTCCTGAAGTATCTTCCTTACAACAACAACATACCCAGTATGATCCCACATAGTTAGGGTCTAGGGAAGGTAGAGTTTACACAGAACTTAACCCTACCTCAGAGGTATTGAAGTATCTTCCATATAAGACAAAATGTTGTCATATTTTTTTGTGTTAAGAATTTATTCCAATAGTATATATAGCAACTAGGTTTAAGGATAATCAATATGTCAAAGTCATTATAAAGATGATTTTGTACATTTCCAATTGTGGACCATACTTTCACTTGTTCGTGTGCAGGTAATCGATTTGTTTTTTATAAATCGTTTCAATGCAAGAATACAAACTCAAAATTATGCTATAATTGAAATTCAACTATGAAAGAATTATAACTCATAGTACTATTGCTGAAAACTCCAATTTGATAATTGCGTCGTCAAAGTATCAAATATCTTATAATAGGTCATAACTTTGTATCTTAATCATTCATAGAACTTGTGAAATTCCATGTTTTTAGCAATAAGATCTCAATTTCCCAATTCGACTCTAACATTAACTCTTAACATTAAGTCGATGTGGGTTTATTAGTTTGGCTGTATTCTCCATTCTAAAAAAAGTTTATCAGGAATCCTAAATAGCAAATGATGAAACTGCTAGTTCAAGAATAAAGACAAAACTTGTGTTTATATCATGTTACTCCGAGCCAACTTTAAATAAAGTGTTGTCTTAGCAGTTAGCACCGTTTCGGGAAAAATATATTTTCGATCATCAAGTTTGAAACCTAAATCAACTTCTTCCCCAAATTGAAAGCTTCTTTAAAATTCCAGATTATTGCCTCCTCAAATCTCCATTTATGAACAAGGTATTTTAACTTTTGATATAATGTTGAATCTAGTGCTGAATACCTCATTAATTTAAGGTCGCTTCACTCCTATTTCCTACTGTTTTATACCCTAAAGAAGAATTTAGTTAGTTGAATATGGTTTTAAAGAGTGACCTGAATTGTGATTACAGCAAAAAAATTTGCTTCTTCTCCTTTAGCTTGTGCTTAGGTTTTAAAGGTAGTAACTTCTATTTATGATCTTGAAGTTCTTCTTATTTTTTTTTTTGCTTTCTTGCTTCCTTTCCTTTTTTTTTCCTTCTTTCCTGTAGCTCTTGTTTCCCCCTTGCGAAATGCTGTTGGAAAGCTTCCTCTTAAAACCAGTGCTGCTGGCTTTTGTCTCTATTGCCAACCGCTCCTCTTCTTTTTTTCTCCTTTTTTAATAGCCGACGGGTCAAGGATAATGGGCTGGCTATTTTAGTTACTCGCTTATTTTAAATGTGCCAAGTCCAATTCTTTAAGTCATTACACACGTTGTGGGTCAGTGGTTATTTGGTCTCTTTTTTATGGTCCTATCCATTCATCTCGACATGAGCTAGTTTTTGGGGTTGAGTTATGCCGTGGTCCAATTCTTTGTCATGGTACCATAGTCAAGTCCATCCCAATTCATGTTTACCTGATGTTGGGCCTCCCATCTTATATTTTCTTCGCTCCAAAGGTTCAACCTTGAGCGCGTGCGACCGGGGTGGGTGGGTAGGGGGTTGGGGTTAAGGTTACCTAGTCTTTATATGATGTGGGCAATTCTTCCCTCATGAGCTAGCTTTAGGATTGAGTTAGACCCAAGGTTGTTTTTTATTTCAGAAGGTGAACAAGAAGATCGAAGGCGTCGGATGATGCTCCATTAGCCTTTATGTGGGTTATATTGAAAGAGAAAAAATAGGATAACATTTGAAGGGGTTGACAATGACTCTGTTAAATTAAAAAAGTAGCCTCTTGTGTATGATATCTCTTTGGTGTACCTATGAGGTTCCTATTTGTGTAGAAGACCGGATATCTTCTGTTGAGAACCATACATTTGTTTAGGTTTCTATACTTTTTGATATTTGACTTGTATTACCGATTTCCCATCATTGATAGTATTGCTTATTAAATTAATGAAAAAGGAGAAATGGTAAATGAAATTGCCTTATTGAATATATGACAGCTGTTTGAATAGTGCTAATTATGTCGTACACATTTTGATTGAACAGCCTCATTAGCTGCAAAGGCACAATATCTTATGCTAATGCCTTCCTTTTCCTCTTCATTCTTATTTGCTGTCCGTTGGTACCTCTGTTCTTCTCTTACCTCTTATTTGTGCATTCATTCATCTGTATATTATATGTTATTTGGCAGTTGATCCTCTTCTAAAATTTACCAAAAATTGATTAGCCTAGTTCTCTTGACATGGCTCATTGTAGATTATAGTGAATCCTCATATTTATGTCTGAATATATTTTCCCAACTGCCAATGTGGTTAGCAGAGAGCGATAGGATGGGGTTGGAAGGCATCTGATATGCAAAATATATGATTATATAAGTATTATGTTTGAGGTCAGGGTCAACTATACATTTGGTGCATAATTTAGAACAAGGACCAGCTCAAAATTGTTTTCTTCTTGTTTCCATTTAACTTCTTAATTTTTCTTATAACTCTCCTTGGCAGACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATG</genome_strand>
        <mrna_strand>TTGGGCGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E702236" ref_strand="+" ref_description="SGN-E702236 [FA18AF11]">
      <seq>gcgaaaatggtggcactatcactgtacaagggaaatctccacagagtacctgaaactccacggcgatggctagtgccaacccccaaaatctctcataaggacttccaatgtctcctccgtcgccggtcccgagccctctctcgcctccaaaatcctcccgatgtctctcctaccaccgccaccgcttcaaaccctaaccctaacctcaaaactgataccaaatccaaacctgaggatgaggttcctgtttcgattccagtgaagatcgagaaggaggaagaggatgttcgagtggagaatgtgaaagagccggagaaattggttgattcatctgctgtcgtggttgaacctaagcttgaggttttggaaaacgatcagaaattggagggtcaggtgaatccctctggtgtggagactagcaacaaagaggatgcaactgataatcagaaaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcgtttgagcagtacatcaccatcttcagattctcaactgaggaagaccccctataatgtggttcctctcgcttcacgatctgttggagttactgttagtccttcacggtttgcacctccgggacagcaagggcaaccttcagtctccccccagtgtccttatctggaacgaacattgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94382" stop="104320"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94682" g_stop="95095" g_length="414"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="414" r_length="414" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95096" i_stop="100536" i_length="5441">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100537" g_stop="100644" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="522" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100781" g_stop="101056" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="798" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103900" g_stop="104020" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="799" r_stop="918" r_length="120" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E702236" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>919</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E702236" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94682" e_stop="95095"/>
          <exon e_start="100537" e_stop="100644"/>
          <exon e_start="100781" e_stop="101056"/>
          <exon e_start="103900" e_stop="104020"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAGGTATTGAATTGCAATTATTGATCTATTTTGTTTGTATGGTGTTATCCATGGATTTTGCTGGCTTTAGTTATGATTCGCTTATGCATCTTTCTGTTTTCTCTTAGTAAGGAAGGGATCCCAGCCAATTCAGGGTAGAAGTTAAGGGTGTGTATACCTTACGAAGCTTTTTACCCTTTTTGCGATGAGGCTGCTCCAAGTCTGGACTCTCCAACCATGACCTACAGCTTTTCCTCATTTTTGTTTATTATGTTTAGGAATTCTTAATATATGTCAATAAAAAAATATGTATCAGATGATTTGTAAGAACTAATACTGTTTATTTCTATGGAAGAGCGTAATGATATATGTGTAGTTGGTTTAAGACTAGCATTTTTTTAGCAGAAGCGTCATGTACTGATTAGAGATGAGGAGGTATATTTGCCTGAGGGTTGGGATACTTACATTAGATCTGTTCGGGGGATACTGCTTTCAGAAATTAAGGATAAATGGAGAGACAGTGAATGCTACATGCTACATTGGATTTATGGAGATAGGGAGAAGAGTCGTTCTTTCCGTATAGGGTGCCCATGAAGGTGTGTTTCCTTGCTTGATTAGGGGCGGGTGAAGTGATATTGATGGCTGAGAACATGAGATAGAAAAGGAGCACCTATGTTGGTGTTACATCTACAGATGTTTGGGTGAATACGTAGACCTGTCTCCTGTTACATTTTCAGGTGGTTGTGCACTCATTGTTGGCAATTCTGAATCGTTTGGTGGATACATGAGTATTTGTCAGAGTTTCTCTATATCGGAAGCAATCTGTAATTCCAGACTTTTCACCTACTCGTTTAACCGGAACCCAACATACTAAATTTAAGAGAATATCAAATATGAAGTCGGTCGCTTTCACAAAACTTTAGACGTTCCCAGTTACTTCTTTACTGACACAAGCCAAAACCAAATTTACAAGACCGACACAAGGAGGAAAACTCTAGGATTTAAGCAAAATAATATACTATATTAGTCTAAATAGAATGATGTCCCATGCGAGGTAAGTGCGGAGCTTGTTAGCTCTGTGACTCTGTATGAGTCAAAGTGTCACCCTTAAATGAATTATCTTTGGGGGGGGGGGAGGAGTTGGATTCAGTTGCACTAATTGCGTGAGTAATAACATCAACCATACATTTTATATGGAGCAGGTATACATAAGGAATCATGCAATTTATAAGATCCTCAACTATGTCCTACTTAAATCAATATAGCCTAAGTTGCTCGGGTGTGGTTTCCGATAATGCGGACCTAGAGCTCAAATCCTATATGATCTAAATTTTTAGATTTGGGTATATGGATCCATGTATGGATATGGGAGCGGGGGTTCGGCTAAAAATAATTCAAATAGCTAAAAATAGAGTTATAAAGCCTAAGTTATGAGATATTATATGGACGTCTTGAGATGAAAATGTTGATCAAGAGGAGAAAGAGATAAAAGGAAAAAGAGTGACAATAGAAATTAATATATCCAAGGTATTTCATTTCTTCAATTTCACCTTAATTTTTGTTTTGCGCATATAAATCATTGAATCTGTCCAAATTTCTCCCTCAAATTTGGTTTAAGTATCCCAAATTGGTTGACCATATCGTTTACGGATGCCACACCATCACTCACACCCGTTTCGTGTCGACATGGGTGCGAGAACAAAGGCGAAGAGTCCGTGCAACTTAGGATATAACCATTGTTGTGAAAAGCGCAGAAAAAGCGCGCTTCAAAGCGACACGACCCTTGTGCGCTTTTTTATCTTGAGGCGAGGCGATCTGAAGAAAACTCTCGCTTCAGATGAAGAAGCGACCCTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAAAAGCGACAATTAGTTTTTTTTTAATAAAAAAATTAGGTTTTTTTTTATAAAAAAATCTGAAATATAACCTTCTCTCTCCTCACGACTCTTTTCCTTCTTTCTCTTCTCGCAACTCTTCTTTCACAACACTTCTTTCCCTTCTTTCTCTCCTCGCAGCTCTTCTTTCACAATACTTCTTTCCCTTCTTTCTCTCCTGACGATCTCGACTGAGTCTGCCTCTTTCTTCAACCTCGACTGTAGGTAACTTTTTGTTCATCTCTTTTTTAGCTAATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATCAATCTTTGCCTGTGCTTCATCTCTTCATCTCTCTGAGTTTCAACTACTCTAGTTTTTTCTTCTTCTTCTCTTCTTTTCTTCATCTCTGCTGCTTGCTCTGTTTCTAATTACTGACTGCTGCCTCCTCTGTTTTTTTTTTCTTCAATTCTTTTGCTTTTTTTTATTTTTTTATTTTGTGATCAGTCTAGCAGCCTTGTTGAAGAATAGGAGTTTGAATCTTTGTGACTTAATTATATTTTTGATTTTTTGCTTTATATGTTATGACTTATGAGTATTTTTGCCTATGTAATTTCTTTCAATCTAAGACTATATTACCTCTATTTAGTTATTTAATATTTTTTATTTTTATACTAAATGTCGCTTTTTTTTTCTAAAAAAAAGCGCGCTTCGCTTCTGTGAAGCAAGCCTTCGTAGCTTTTTTCCGCTTCTCGCTTCCCAAAACACGGATATAACAATTCGTGTGTGAAATAAATGATCAAAATGGATGAAAATATACATTTTAGATCCATTTATCCTTTTCTACTTAATATCCTTATATAGTGGGAGATACATTAACCAAAATCGATGTAAATTTGGACACCACAAGTCTATCATGGCTTTCTGACTATCCCATCAGCTAGGTTCCCTTCTAGAGGGCTCAAGTGTGATATTCATATTACTGGTTCTTTCCTGCTAGTATAGGAAAATATTATACAAGGTGCGACCATGTCTAGTGACCTCAACGTTAGATGATAGTGATCTAGCAAAGCTTACTCCTGAAGTATCTTCCTTACAACAACAACATACCCAGTATGATCCCACATAGTTAGGGTCTAGGGAAGGTAGAGTTTACACAGAACTTAACCCTACCTCAGAGGTATTGAAGTATCTTCCATATAAGACAAAATGTTGTCATATTTTTTTGTGTTAAGAATTTATTCCAATAGTATATATAGCAACTAGGTTTAAGGATAATCAATATGTCAAAGTCATTATAAAGATGATTTTGTACATTTCCAATTGTGGACCATACTTTCACTTGTTCGTGTGCAGGTAATCGATTTGTTTTTTATAAATCGTTTCAATGCAAGAATACAAACTCAAAATTATGCTATAATTGAAATTCAACTATGAAAGAATTATAACTCATAGTACTATTGCTGAAAACTCCAATTTGATAATTGCGTCGTCAAAGTATCAAATATCTTATAATAGGTCATAACTTTGTATCTTAATCATTCATAGAACTTGTGAAATTCCATGTTTTTAGCAATAAGATCTCAATTTCCCAATTCGACTCTAACATTAACTCTTAACATTAAGTCGATGTGGGTTTATTAGTTTGGCTGTATTCTCCATTCTAAAAAAAGTTTATCAGGAATCCTAAATAGCAAATGATGAAACTGCTAGTTCAAGAATAAAGACAAAACTTGTGTTTATATCATGTTACTCCGAGCCAACTTTAAATAAAGTGTTGTCTTAGCAGTTAGCACCGTTTCGGGAAAAATATATTTTCGATCATCAAGTTTGAAACCTAAATCAACTTCTTCCCCAAATTGAAAGCTTCTTTAAAATTCCAGATTATTGCCTCCTCAAATCTCCATTTATGAACAAGGTATTTTAACTTTTGATATAATGTTGAATCTAGTGCTGAATACCTCATTAATTTAAGGTCGCTTCACTCCTATTTCCTACTGTTTTATACCCTAAAGAAGAATTTAGTTAGTTGAATATGGTTTTAAAGAGTGACCTGAATTGTGATTACAGCAAAAAAATTTGCTTCTTCTCCTTTAGCTTGTGCTTAGGTTTTAAAGGTAGTAACTTCTATTTATGATCTTGAAGTTCTTCTTATTTTTTTTTTTGCTTTCTTGCTTCCTTTCCTTTTTTTTTCCTTCTTTCCTGTAGCTCTTGTTTCCCCCTTGCGAAATGCTGTTGGAAAGCTTCCTCTTAAAACCAGTGCTGCTGGCTTTTGTCTCTATTGCCAACCGCTCCTCTTCTTTTTTTCTCCTTTTTTAATAGCCGACGGGTCAAGGATAATGGGCTGGCTATTTTAGTTACTCGCTTATTTTAAATGTGCCAAGTCCAATTCTTTAAGTCATTACACACGTTGTGGGTCAGTGGTTATTTGGTCTCTTTTTTATGGTCCTATCCATTCATCTCGACATGAGCTAGTTTTTGGGGTTGAGTTATGCCGTGGTCCAATTCTTTGTCATGGTACCATAGTCAAGTCCATCCCAATTCATGTTTACCTGATGTTGGGCCTCCCATCTTATATTTTCTTCGCTCCAAAGGTTCAACCTTGAGCGCGTGCGACCGGGGTGGGTGGGTAGGGGGTTGGGGTTAAGGTTACCTAGTCTTTATATGATGTGGGCAATTCTTCCCTCATGAGCTAGCTTTAGGATTGAGTTAGACCCAAGGTTGTTTTTTATTTCAGAAGGTGAACAAGAAGATCGAAGGCGTCGGATGATGCTCCATTAGCCTTTATGTGGGTTATATTGAAAGAGAAAAAATAGGATAACATTTGAAGGGGTTGACAATGACTCTGTTAAATTAAAAAAGTAGCCTCTTGTGTATGATATCTCTTTGGTGTACCTATGAGGTTCCTATTTGTGTAGAAGACCGGATATCTTCTGTTGAGAACCATACATTTGTTTAGGTTTCTATACTTTTTGATATTTGACTTGTATTACCGATTTCCCATCATTGATAGTATTGCTTATTAAATTAATGAAAAAGGAGAAATGGTAAATGAAATTGCCTTATTGAATATATGACAGCTGTTTGAATAGTGCTAATTATGTCGTACACATTTTGATTGAACAGCCTCATTAGCTGCAAAGGCACAATATCTTATGCTAATGCCTTCCTTTTCCTCTTCATTCTTATTTGCTGTCCGTTGGTACCTCTGTTCTTCTCTTACCTCTTATTTGTGCATTCATTCATCTGTATATTATATGTTATTTGGCAGTTGATCCTCTTCTAAAATTTACCAAAAATTGATTAGCCTAGTTCTCTTGACATGGCTCATTGTAGATTATAGTGAATCCTCATATTTATGTCTGAATATATTTTCCCAACTGCCAATGTGGTTAGCAGAGAGCGATAGGATGGGGTTGGAAGGCATCTGATATGCAAAATATATGATTATATAAGTATTATGTTTGAGGTCAGGGTCAACTATACATTTGGTGCATAATTTAGAACAAGGACCAGCTCAAAATTGTTTTCTTCTTGTTTCCATTTAACTTCTTAATTTTTCTTATAACTCTCCTTGGCAGACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTGGTAAGTGCCCTATCTATGCGTGCATTGTTACCTTTGGCTTTCATTTGTGGCGCTACACCACCAGGAGTGGAAAAAGAGGGCTTTAATTTTTGTTTCTAATATAATTAATCTAGCAAAGATTTAAAAAGTTTTAAGTAAAGCAACAACATTCAATATGTGCAAGACTGCAAGTTAGTTCATCATATTATTGCTGGTTCACTCCCTTGAACCAAGTCTTCTATTTATCTTCTTCCTCAATGGAGCAGATCTTAATTTTTCTTTCATAGAACCATGTCCAAGGCATCTCGAAATGTGTGCTCTTGGTAACATTTGCTGAAAATTAAGGACCCCATATTGAACTTCTATTGGACATGAGATTTTGTTACAATTGTGTCTCTGTAACTAGTTTTGAGCTGTTCCAATCATTTTCTGCCACTTGTTGGACTAATTGGACCTTGCAATAAATTATGTTGCTACTTTGCACATGCCATAATAAGGGTTAGTGCTTTGACTAAGGGAAGATGATATATGTATATATATATATATGTATATATATATATATTATCTTGTTGTTGCATCAATGGAGAAGTTTATGTGCTATTTTACCTTGTTAATACTAGTTGTAAGAGCAAAAATTACTTTGTGGCCATTTTCTTCAGTGCAAACTGGGAATCAACATGTGGGATGAGGGATTATTGGAGTTATATATCAGCCTTCAACCACTTCCCCTTGATGTGAAATTTTCAGTCCCCTTTCTTTGTGAATAATGGAGTTCCAGAGAATGTACGATGTTCGGAGACTTGAACCAAGAGGTGCATCCTTAGATTACGTTAGGGCAATTAAATACATGTACTATGGAGCAAGGAAACTCAGATCACTTCTCGTTGTGATGGGGTTGCACCAGGGATCGACACATAGCCCATTTCTAGTTACTAACACGACTTATCCTAGGAAAAGTCCATGATATATGCTCTTTGCAGATGACAATGTGGTAATGAGACCAGGACAGAGTTAACAATAGGTGCCTTAACAATATATTGGAAATTTGAGGACAGACGTTGGAGTATAAAGAGTCTGGGTTGAGTAGGACTTAGACAAAATACTTGAAGTTCAAGTTCAATGACGTAAAACACATGGTAGATGTGGAAGTAAGGATTGAAACAAGCAGGGATCAATGATTCAGGAAAATAAGGAGATAGACGAAGATGTTACACATTGTATTGGAGCAGGTGGATGACGTTCACTGTCTTTTATGATAAGATTGTACCACCAAAGCCTTAAGGTAGGTATTACAAAGTGGTGGTCAGACTAGCTATGGACAGAGTGTTGACTAGACAAGAACTCGCATGTATAGAAGATGAGAGTAGTAGAAATGAGAATGTTGAGTTGGATGTTTGGGCATACTAAGATTGAGATTAGGAATGAAGCTATACGCGACATTGTGGGATAGGGCGCCTTGGTGAACAAGATGAGGCATGTGAAGCTGAGATGGTTCGAACATGTGAAGGAAACATGCATGAATACCCCGATTAGGAGCGAGAGGTTGGCTATAGAGGATGTAACATGATGTAGAGGTAGACCGAGAAGTCTCAAAAGAAATGATTAGATAGGACATGACTCATGCAGCTTACCTTTATGAGGACATGACCTTGGCCCTAGATAGGAAGATATGGCGGTCAAAAATTAGGGTAGAAGGTCAGTAGGTCGAACATTGTCTTGTTCTCTCTTACTGTCTTATTCGATTTTAGTATTACATGATTTTTCATTTGCTAACAGCTACCGTTATTTTAAATTTTTTGGTGTTGCTATTGCTCTCTTTATTGATTTCAGCATGACTTTGATTTTAGGATTACATTATTGTATTTGCTTTGCATACTTGTTTTTTATATGCTTTACCTGTGTCGTTTATCTGGTAGATACAACCTCTCTACCTTTCAAAAGGTAGGGGTAAGGCCGTGTACACACCATCCTCCTCAGACCCCACTTGTGGGATTATAACTGGCCCAGTTGAGCTGGGTATGTTTTTATTGGATCTCCAGATGAAGACCAGACAATACTTTTCTTGACAAATTGCTTTACGTGGAAGGCTGCTGATACTGCATTAGTTGCTTACATTTGGTTTTCACTAGACATCTTTTTCATATTATACATAAATATGCAGGCTACACTAGAAACTACTATATAGAATTGGATAATCCGTAGTGAATAAATTTATCTTGGGTCTGTTTTGTTTTCTCACTCCATGTAGCATGGGCACTTTATTAGATACATATTCAAGTATAGTTTAAGGCTCCACCTGCAAGGACTTTTTTAACTTTAACTTCTTCCAATTTTTGCAAAGTGGACTATTTGTTAAATCAAAAGTAGATATATATTAGCAGCTTCAAAAAAAAAAAGTAGATGTATATTAGAATCTAGCTATTAGTAGTCCTTTGTAATTATAATGATGAACAACAATATATTTTCCTAATCATATGTTAGTCGACTTACTAGTTAATTAACTAAATAGTTCTTATTGTATCCTCAGGCTACGTTCCTTTGAGGTCTACTTTGATATATAGGGTGAAATGGTAGGGCAAAGTGACAAGACACTGAAGAAAACAGCTATAAGAAGAAAAGATATGAAAGCAGATGAAGAATTAGTTCTCATAAACCAGTTAAAAAAAAGTCATGAGATTACCATTAAGTAGCTTATCTAGTAAAATTTGAGTCAGGGAGCAGGGAGCTGAACTATACACCACAGATAAAAATCAGTTCATAAAAAATTCAGCCAATTGGTTTATGAGAAAACTAATTCTTAAATAGTATGTAATAAATTTCACTAGTTCAAGAAATCCATTCTCACTTGCTGTCTATTTTTTCAGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTG</genome_strand>
        <mrna_strand>GCGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTC-AGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E259950" ref_strand="+" ref_description="SGN-E259950 [cLEG-51-O2]">
      <seq>cgaaaatggtggcactatcactgtacaagggaaatctccacagagtacctgaaactccacggcgatggctagtgccaacccccaaaatctctcataaggacttccaatgtctcctccgtcgccggtcccgagccctctctcgcctccaaaatcctcccgatgtctctcctaccaccgccaccgcttcaaaccctaaccctaacctcaaaactgataccaaatccaaacctgaggatgaggttcctgtttcgattccagtgaatatcgagaaggaggaagaggatgttccagtggataatgtgaaagagccggagaaattggttgattcatctgctgtcgtggttgaacctaagcttgaggttttggaaaacgatcagaaattggaaggtcaagtgaatccctctggtgtgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94383" stop="95394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94683" g_stop="95094" g_length="412"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="412" r_length="412" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E259950" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>412</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E259950" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94683" e_stop="95094"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGA</genome_strand>
        <mrna_strand>CGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAATATCGAGAAGGAGGAAGAGGATGTTCCAGTGGATAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAAGGTCAAGTGAATCCCTCTGGTGTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E376546" ref_strand="+" ref_description="SGN-E376546 [TUS-17-J23]">
      <seq>gaaaatggtggcactatcactgtacaagggaaatctccacagagtacctgaaactccacggcgatggctagtgccaacccccaaaatctctcataaggacttccaatgtctcctccgtcgccggtcccgagccctctctcgcctccaaaatcctcccgatgtctctcctaccaccgccaccgcttcaaaccctaaccctaacctcaaaactgataccaaatccaaacctgaggatgaggttcctgtttcgattccagtgaagatcgagaaggaggaagaggatgttcgagtggagaatgtgaaagagccggagaaattggttgattcatctgctgtcgtggttgaacctaagcttgaggttttggaaaacgatcagaaattggagggtcaggtgaatccctctggtgtggagactagcaacaaagaggatgcaactgataatcagaaaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94384" stop="101181"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94684" g_stop="95095" g_length="412"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="412" r_length="412" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95096" i_stop="100536" i_length="5441">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100537" g_stop="100644" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="520" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100781" g_stop="100881" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="621" r_length="101" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E376546" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>621</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E376546" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94684" e_stop="95095"/>
          <exon e_start="100537" e_stop="100644"/>
          <exon e_start="100781" e_stop="100881"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAGGTATTGAATTGCAATTATTGATCTATTTTGTTTGTATGGTGTTATCCATGGATTTTGCTGGCTTTAGTTATGATTCGCTTATGCATCTTTCTGTTTTCTCTTAGTAAGGAAGGGATCCCAGCCAATTCAGGGTAGAAGTTAAGGGTGTGTATACCTTACGAAGCTTTTTACCCTTTTTGCGATGAGGCTGCTCCAAGTCTGGACTCTCCAACCATGACCTACAGCTTTTCCTCATTTTTGTTTATTATGTTTAGGAATTCTTAATATATGTCAATAAAAAAATATGTATCAGATGATTTGTAAGAACTAATACTGTTTATTTCTATGGAAGAGCGTAATGATATATGTGTAGTTGGTTTAAGACTAGCATTTTTTTAGCAGAAGCGTCATGTACTGATTAGAGATGAGGAGGTATATTTGCCTGAGGGTTGGGATACTTACATTAGATCTGTTCGGGGGATACTGCTTTCAGAAATTAAGGATAAATGGAGAGACAGTGAATGCTACATGCTACATTGGATTTATGGAGATAGGGAGAAGAGTCGTTCTTTCCGTATAGGGTGCCCATGAAGGTGTGTTTCCTTGCTTGATTAGGGGCGGGTGAAGTGATATTGATGGCTGAGAACATGAGATAGAAAAGGAGCACCTATGTTGGTGTTACATCTACAGATGTTTGGGTGAATACGTAGACCTGTCTCCTGTTACATTTTCAGGTGGTTGTGCACTCATTGTTGGCAATTCTGAATCGTTTGGTGGATACATGAGTATTTGTCAGAGTTTCTCTATATCGGAAGCAATCTGTAATTCCAGACTTTTCACCTACTCGTTTAACCGGAACCCAACATACTAAATTTAAGAGAATATCAAATATGAAGTCGGTCGCTTTCACAAAACTTTAGACGTTCCCAGTTACTTCTTTACTGACACAAGCCAAAACCAAATTTACAAGACCGACACAAGGAGGAAAACTCTAGGATTTAAGCAAAATAATATACTATATTAGTCTAAATAGAATGATGTCCCATGCGAGGTAAGTGCGGAGCTTGTTAGCTCTGTGACTCTGTATGAGTCAAAGTGTCACCCTTAAATGAATTATCTTTGGGGGGGGGGGAGGAGTTGGATTCAGTTGCACTAATTGCGTGAGTAATAACATCAACCATACATTTTATATGGAGCAGGTATACATAAGGAATCATGCAATTTATAAGATCCTCAACTATGTCCTACTTAAATCAATATAGCCTAAGTTGCTCGGGTGTGGTTTCCGATAATGCGGACCTAGAGCTCAAATCCTATATGATCTAAATTTTTAGATTTGGGTATATGGATCCATGTATGGATATGGGAGCGGGGGTTCGGCTAAAAATAATTCAAATAGCTAAAAATAGAGTTATAAAGCCTAAGTTATGAGATATTATATGGACGTCTTGAGATGAAAATGTTGATCAAGAGGAGAAAGAGATAAAAGGAAAAAGAGTGACAATAGAAATTAATATATCCAAGGTATTTCATTTCTTCAATTTCACCTTAATTTTTGTTTTGCGCATATAAATCATTGAATCTGTCCAAATTTCTCCCTCAAATTTGGTTTAAGTATCCCAAATTGGTTGACCATATCGTTTACGGATGCCACACCATCACTCACACCCGTTTCGTGTCGACATGGGTGCGAGAACAAAGGCGAAGAGTCCGTGCAACTTAGGATATAACCATTGTTGTGAAAAGCGCAGAAAAAGCGCGCTTCAAAGCGACACGACCCTTGTGCGCTTTTTTATCTTGAGGCGAGGCGATCTGAAGAAAACTCTCGCTTCAGATGAAGAAGCGACCCTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAAAAGCGACAATTAGTTTTTTTTTAATAAAAAAATTAGGTTTTTTTTTATAAAAAAATCTGAAATATAACCTTCTCTCTCCTCACGACTCTTTTCCTTCTTTCTCTTCTCGCAACTCTTCTTTCACAACACTTCTTTCCCTTCTTTCTCTCCTCGCAGCTCTTCTTTCACAATACTTCTTTCCCTTCTTTCTCTCCTGACGATCTCGACTGAGTCTGCCTCTTTCTTCAACCTCGACTGTAGGTAACTTTTTGTTCATCTCTTTTTTAGCTAATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATCAATCTTTGCCTGTGCTTCATCTCTTCATCTCTCTGAGTTTCAACTACTCTAGTTTTTTCTTCTTCTTCTCTTCTTTTCTTCATCTCTGCTGCTTGCTCTGTTTCTAATTACTGACTGCTGCCTCCTCTGTTTTTTTTTTCTTCAATTCTTTTGCTTTTTTTTATTTTTTTATTTTGTGATCAGTCTAGCAGCCTTGTTGAAGAATAGGAGTTTGAATCTTTGTGACTTAATTATATTTTTGATTTTTTGCTTTATATGTTATGACTTATGAGTATTTTTGCCTATGTAATTTCTTTCAATCTAAGACTATATTACCTCTATTTAGTTATTTAATATTTTTTATTTTTATACTAAATGTCGCTTTTTTTTTCTAAAAAAAAGCGCGCTTCGCTTCTGTGAAGCAAGCCTTCGTAGCTTTTTTCCGCTTCTCGCTTCCCAAAACACGGATATAACAATTCGTGTGTGAAATAAATGATCAAAATGGATGAAAATATACATTTTAGATCCATTTATCCTTTTCTACTTAATATCCTTATATAGTGGGAGATACATTAACCAAAATCGATGTAAATTTGGACACCACAAGTCTATCATGGCTTTCTGACTATCCCATCAGCTAGGTTCCCTTCTAGAGGGCTCAAGTGTGATATTCATATTACTGGTTCTTTCCTGCTAGTATAGGAAAATATTATACAAGGTGCGACCATGTCTAGTGACCTCAACGTTAGATGATAGTGATCTAGCAAAGCTTACTCCTGAAGTATCTTCCTTACAACAACAACATACCCAGTATGATCCCACATAGTTAGGGTCTAGGGAAGGTAGAGTTTACACAGAACTTAACCCTACCTCAGAGGTATTGAAGTATCTTCCATATAAGACAAAATGTTGTCATATTTTTTTGTGTTAAGAATTTATTCCAATAGTATATATAGCAACTAGGTTTAAGGATAATCAATATGTCAAAGTCATTATAAAGATGATTTTGTACATTTCCAATTGTGGACCATACTTTCACTTGTTCGTGTGCAGGTAATCGATTTGTTTTTTATAAATCGTTTCAATGCAAGAATACAAACTCAAAATTATGCTATAATTGAAATTCAACTATGAAAGAATTATAACTCATAGTACTATTGCTGAAAACTCCAATTTGATAATTGCGTCGTCAAAGTATCAAATATCTTATAATAGGTCATAACTTTGTATCTTAATCATTCATAGAACTTGTGAAATTCCATGTTTTTAGCAATAAGATCTCAATTTCCCAATTCGACTCTAACATTAACTCTTAACATTAAGTCGATGTGGGTTTATTAGTTTGGCTGTATTCTCCATTCTAAAAAAAGTTTATCAGGAATCCTAAATAGCAAATGATGAAACTGCTAGTTCAAGAATAAAGACAAAACTTGTGTTTATATCATGTTACTCCGAGCCAACTTTAAATAAAGTGTTGTCTTAGCAGTTAGCACCGTTTCGGGAAAAATATATTTTCGATCATCAAGTTTGAAACCTAAATCAACTTCTTCCCCAAATTGAAAGCTTCTTTAAAATTCCAGATTATTGCCTCCTCAAATCTCCATTTATGAACAAGGTATTTTAACTTTTGATATAATGTTGAATCTAGTGCTGAATACCTCATTAATTTAAGGTCGCTTCACTCCTATTTCCTACTGTTTTATACCCTAAAGAAGAATTTAGTTAGTTGAATATGGTTTTAAAGAGTGACCTGAATTGTGATTACAGCAAAAAAATTTGCTTCTTCTCCTTTAGCTTGTGCTTAGGTTTTAAAGGTAGTAACTTCTATTTATGATCTTGAAGTTCTTCTTATTTTTTTTTTTGCTTTCTTGCTTCCTTTCCTTTTTTTTTCCTTCTTTCCTGTAGCTCTTGTTTCCCCCTTGCGAAATGCTGTTGGAAAGCTTCCTCTTAAAACCAGTGCTGCTGGCTTTTGTCTCTATTGCCAACCGCTCCTCTTCTTTTTTTCTCCTTTTTTAATAGCCGACGGGTCAAGGATAATGGGCTGGCTATTTTAGTTACTCGCTTATTTTAAATGTGCCAAGTCCAATTCTTTAAGTCATTACACACGTTGTGGGTCAGTGGTTATTTGGTCTCTTTTTTATGGTCCTATCCATTCATCTCGACATGAGCTAGTTTTTGGGGTTGAGTTATGCCGTGGTCCAATTCTTTGTCATGGTACCATAGTCAAGTCCATCCCAATTCATGTTTACCTGATGTTGGGCCTCCCATCTTATATTTTCTTCGCTCCAAAGGTTCAACCTTGAGCGCGTGCGACCGGGGTGGGTGGGTAGGGGGTTGGGGTTAAGGTTACCTAGTCTTTATATGATGTGGGCAATTCTTCCCTCATGAGCTAGCTTTAGGATTGAGTTAGACCCAAGGTTGTTTTTTATTTCAGAAGGTGAACAAGAAGATCGAAGGCGTCGGATGATGCTCCATTAGCCTTTATGTGGGTTATATTGAAAGAGAAAAAATAGGATAACATTTGAAGGGGTTGACAATGACTCTGTTAAATTAAAAAAGTAGCCTCTTGTGTATGATATCTCTTTGGTGTACCTATGAGGTTCCTATTTGTGTAGAAGACCGGATATCTTCTGTTGAGAACCATACATTTGTTTAGGTTTCTATACTTTTTGATATTTGACTTGTATTACCGATTTCCCATCATTGATAGTATTGCTTATTAAATTAATGAAAAAGGAGAAATGGTAAATGAAATTGCCTTATTGAATATATGACAGCTGTTTGAATAGTGCTAATTATGTCGTACACATTTTGATTGAACAGCCTCATTAGCTGCAAAGGCACAATATCTTATGCTAATGCCTTCCTTTTCCTCTTCATTCTTATTTGCTGTCCGTTGGTACCTCTGTTCTTCTCTTACCTCTTATTTGTGCATTCATTCATCTGTATATTATATGTTATTTGGCAGTTGATCCTCTTCTAAAATTTACCAAAAATTGATTAGCCTAGTTCTCTTGACATGGCTCATTGTAGATTATAGTGAATCCTCATATTTATGTCTGAATATATTTTCCCAACTGCCAATGTGGTTAGCAGAGAGCGATAGGATGGGGTTGGAAGGCATCTGATATGCAAAATATATGATTATATAAGTATTATGTTTGAGGTCAGGGTCAACTATACATTTGGTGCATAATTTAGAACAAGGACCAGCTCAAAATTGTTTTCTTCTTGTTTCCATTTAACTTCTTAATTTTTCTTATAACTCTCCTTGGCAGACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATC</genome_strand>
        <mrna_strand>GAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E210571" ref_strand="+" ref_description="SGN-E210571 [cLEC-35-N12]">
      <seq>gaaaatggtggcactatcactgtacaagggaaatctccacagagtacctgaaactccacggcgatggctagtgccaacccccaaaatctctcataaggacttccaatgtctcctccgtcgccggtcccgagccctctctcgcctccaaaatcctcccgatgtctctcctaccaccgccaccgcttcaaaccctaaccctaacctcaaaactgataccaaatccaaacctgaggatgaggttcctgtttcgattccagtgaagatcgagaaggaggaagaggatgttcgagtggagaatgtgaaagagccggagaaattggttgattcatctgctgtcgtggttgaacctaagcttgaggttttggaaaacgatcagaaattgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94384" stop="95367"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94684" g_stop="95067" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="384" r_length="384" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E210571" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E210571" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94684" e_stop="95067"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGA</genome_strand>
        <mrna_strand>GAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E301583" ref_strand="+" ref_description="SGN-E301583 [cLEW-23-B14]">
      <seq>tatcactgtacaagggaaatctgggcagagtacctgaaactccacggcgatggctattgccaacccccaaaatctctcataaggacttccaatgtctcctccgtcgccggtcccgagccctctctcgcctccaaaatcctcccgatgtctctcctaccaccgccaccgcttcaaaccctaaccctaacctcaaaactgataccaaatccaaacctgaggatgaggttcctgtttcgattccagtgaagatcgagaaggaggaagaggatgttccagtggagaatgtcaaagagccggagaaattggttgattcatctgctgtcgtggttgaacctaagcttgaggttttggaaaacgatcacaaattggagggtcaggtgaatccctctggtgtggagac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94398" stop="95395"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94698" g_stop="95095" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="398" r_length="398" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E301583" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>398</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E301583" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94698" e_stop="95095"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAG</genome_strand>
        <mrna_strand>TATCACTGTACAAGGGAAATCTGGGCAGAGTACCTGAAACTCCACGGCGATGGCTATTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCCAGTGGAGAATGTCAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCACAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E697818" ref_strand="+" ref_description="SGN-E697818 [FA04BE05]">
      <seq>cgctttaatctccacagagtacctgaaactccacggtgatggctagtgccaacccccaaaatctctcataaggacttccaatgtctcctccgtcgccggtcccgagccctctctcgcctccaaaatcctcccgatgtctctcctaccaccgccaccgcttcaaaccctaaccctaacctcaaaactgataccaaatccaaacctgaggatgaggttcctgtttcgattccagtgaagatcgagaaggaggaagaggatgttcgagtggagaatgtgaaagagccggagaaattggttgattcatctgctgtcgtggttgaacctaagcttgaggttttggaaaacgatcagaaattggagggtcaggtgaatccctctggtgtggagactagcaacaaagaggatgcaactgataatcagaaaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaacaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcctttgagcagtacatcaccatcttcagatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94415" stop="101330"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94709" g_stop="95095" g_length="387"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="387" r_length="387" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95096" i_stop="100536" i_length="5441">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100537" g_stop="100644" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="495" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100781" g_stop="101027" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="742" r_length="247" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E697818" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>742</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E697818" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94709" e_stop="95095"/>
          <exon e_start="100537" e_stop="100644"/>
          <exon e_start="100781" e_stop="101027"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAGGTATTGAATTGCAATTATTGATCTATTTTGTTTGTATGGTGTTATCCATGGATTTTGCTGGCTTTAGTTATGATTCGCTTATGCATCTTTCTGTTTTCTCTTAGTAAGGAAGGGATCCCAGCCAATTCAGGGTAGAAGTTAAGGGTGTGTATACCTTACGAAGCTTTTTACCCTTTTTGCGATGAGGCTGCTCCAAGTCTGGACTCTCCAACCATGACCTACAGCTTTTCCTCATTTTTGTTTATTATGTTTAGGAATTCTTAATATATGTCAATAAAAAAATATGTATCAGATGATTTGTAAGAACTAATACTGTTTATTTCTATGGAAGAGCGTAATGATATATGTGTAGTTGGTTTAAGACTAGCATTTTTTTAGCAGAAGCGTCATGTACTGATTAGAGATGAGGAGGTATATTTGCCTGAGGGTTGGGATACTTACATTAGATCTGTTCGGGGGATACTGCTTTCAGAAATTAAGGATAAATGGAGAGACAGTGAATGCTACATGCTACATTGGATTTATGGAGATAGGGAGAAGAGTCGTTCTTTCCGTATAGGGTGCCCATGAAGGTGTGTTTCCTTGCTTGATTAGGGGCGGGTGAAGTGATATTGATGGCTGAGAACATGAGATAGAAAAGGAGCACCTATGTTGGTGTTACATCTACAGATGTTTGGGTGAATACGTAGACCTGTCTCCTGTTACATTTTCAGGTGGTTGTGCACTCATTGTTGGCAATTCTGAATCGTTTGGTGGATACATGAGTATTTGTCAGAGTTTCTCTATATCGGAAGCAATCTGTAATTCCAGACTTTTCACCTACTCGTTTAACCGGAACCCAACATACTAAATTTAAGAGAATATCAAATATGAAGTCGGTCGCTTTCACAAAACTTTAGACGTTCCCAGTTACTTCTTTACTGACACAAGCCAAAACCAAATTTACAAGACCGACACAAGGAGGAAAACTCTAGGATTTAAGCAAAATAATATACTATATTAGTCTAAATAGAATGATGTCCCATGCGAGGTAAGTGCGGAGCTTGTTAGCTCTGTGACTCTGTATGAGTCAAAGTGTCACCCTTAAATGAATTATCTTTGGGGGGGGGGGAGGAGTTGGATTCAGTTGCACTAATTGCGTGAGTAATAACATCAACCATACATTTTATATGGAGCAGGTATACATAAGGAATCATGCAATTTATAAGATCCTCAACTATGTCCTACTTAAATCAATATAGCCTAAGTTGCTCGGGTGTGGTTTCCGATAATGCGGACCTAGAGCTCAAATCCTATATGATCTAAATTTTTAGATTTGGGTATATGGATCCATGTATGGATATGGGAGCGGGGGTTCGGCTAAAAATAATTCAAATAGCTAAAAATAGAGTTATAAAGCCTAAGTTATGAGATATTATATGGACGTCTTGAGATGAAAATGTTGATCAAGAGGAGAAAGAGATAAAAGGAAAAAGAGTGACAATAGAAATTAATATATCCAAGGTATTTCATTTCTTCAATTTCACCTTAATTTTTGTTTTGCGCATATAAATCATTGAATCTGTCCAAATTTCTCCCTCAAATTTGGTTTAAGTATCCCAAATTGGTTGACCATATCGTTTACGGATGCCACACCATCACTCACACCCGTTTCGTGTCGACATGGGTGCGAGAACAAAGGCGAAGAGTCCGTGCAACTTAGGATATAACCATTGTTGTGAAAAGCGCAGAAAAAGCGCGCTTCAAAGCGACACGACCCTTGTGCGCTTTTTTATCTTGAGGCGAGGCGATCTGAAGAAAACTCTCGCTTCAGATGAAGAAGCGACCCTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAAAAGCGACAATTAGTTTTTTTTTAATAAAAAAATTAGGTTTTTTTTTATAAAAAAATCTGAAATATAACCTTCTCTCTCCTCACGACTCTTTTCCTTCTTTCTCTTCTCGCAACTCTTCTTTCACAACACTTCTTTCCCTTCTTTCTCTCCTCGCAGCTCTTCTTTCACAATACTTCTTTCCCTTCTTTCTCTCCTGACGATCTCGACTGAGTCTGCCTCTTTCTTCAACCTCGACTGTAGGTAACTTTTTGTTCATCTCTTTTTTAGCTAATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATCAATCTTTGCCTGTGCTTCATCTCTTCATCTCTCTGAGTTTCAACTACTCTAGTTTTTTCTTCTTCTTCTCTTCTTTTCTTCATCTCTGCTGCTTGCTCTGTTTCTAATTACTGACTGCTGCCTCCTCTGTTTTTTTTTTCTTCAATTCTTTTGCTTTTTTTTATTTTTTTATTTTGTGATCAGTCTAGCAGCCTTGTTGAAGAATAGGAGTTTGAATCTTTGTGACTTAATTATATTTTTGATTTTTTGCTTTATATGTTATGACTTATGAGTATTTTTGCCTATGTAATTTCTTTCAATCTAAGACTATATTACCTCTATTTAGTTATTTAATATTTTTTATTTTTATACTAAATGTCGCTTTTTTTTTCTAAAAAAAAGCGCGCTTCGCTTCTGTGAAGCAAGCCTTCGTAGCTTTTTTCCGCTTCTCGCTTCCCAAAACACGGATATAACAATTCGTGTGTGAAATAAATGATCAAAATGGATGAAAATATACATTTTAGATCCATTTATCCTTTTCTACTTAATATCCTTATATAGTGGGAGATACATTAACCAAAATCGATGTAAATTTGGACACCACAAGTCTATCATGGCTTTCTGACTATCCCATCAGCTAGGTTCCCTTCTAGAGGGCTCAAGTGTGATATTCATATTACTGGTTCTTTCCTGCTAGTATAGGAAAATATTATACAAGGTGCGACCATGTCTAGTGACCTCAACGTTAGATGATAGTGATCTAGCAAAGCTTACTCCTGAAGTATCTTCCTTACAACAACAACATACCCAGTATGATCCCACATAGTTAGGGTCTAGGGAAGGTAGAGTTTACACAGAACTTAACCCTACCTCAGAGGTATTGAAGTATCTTCCATATAAGACAAAATGTTGTCATATTTTTTTGTGTTAAGAATTTATTCCAATAGTATATATAGCAACTAGGTTTAAGGATAATCAATATGTCAAAGTCATTATAAAGATGATTTTGTACATTTCCAATTGTGGACCATACTTTCACTTGTTCGTGTGCAGGTAATCGATTTGTTTTTTATAAATCGTTTCAATGCAAGAATACAAACTCAAAATTATGCTATAATTGAAATTCAACTATGAAAGAATTATAACTCATAGTACTATTGCTGAAAACTCCAATTTGATAATTGCGTCGTCAAAGTATCAAATATCTTATAATAGGTCATAACTTTGTATCTTAATCATTCATAGAACTTGTGAAATTCCATGTTTTTAGCAATAAGATCTCAATTTCCCAATTCGACTCTAACATTAACTCTTAACATTAAGTCGATGTGGGTTTATTAGTTTGGCTGTATTCTCCATTCTAAAAAAAGTTTATCAGGAATCCTAAATAGCAAATGATGAAACTGCTAGTTCAAGAATAAAGACAAAACTTGTGTTTATATCATGTTACTCCGAGCCAACTTTAAATAAAGTGTTGTCTTAGCAGTTAGCACCGTTTCGGGAAAAATATATTTTCGATCATCAAGTTTGAAACCTAAATCAACTTCTTCCCCAAATTGAAAGCTTCTTTAAAATTCCAGATTATTGCCTCCTCAAATCTCCATTTATGAACAAGGTATTTTAACTTTTGATATAATGTTGAATCTAGTGCTGAATACCTCATTAATTTAAGGTCGCTTCACTCCTATTTCCTACTGTTTTATACCCTAAAGAAGAATTTAGTTAGTTGAATATGGTTTTAAAGAGTGACCTGAATTGTGATTACAGCAAAAAAATTTGCTTCTTCTCCTTTAGCTTGTGCTTAGGTTTTAAAGGTAGTAACTTCTATTTATGATCTTGAAGTTCTTCTTATTTTTTTTTTTGCTTTCTTGCTTCCTTTCCTTTTTTTTTCCTTCTTTCCTGTAGCTCTTGTTTCCCCCTTGCGAAATGCTGTTGGAAAGCTTCCTCTTAAAACCAGTGCTGCTGGCTTTTGTCTCTATTGCCAACCGCTCCTCTTCTTTTTTTCTCCTTTTTTAATAGCCGACGGGTCAAGGATAATGGGCTGGCTATTTTAGTTACTCGCTTATTTTAAATGTGCCAAGTCCAATTCTTTAAGTCATTACACACGTTGTGGGTCAGTGGTTATTTGGTCTCTTTTTTATGGTCCTATCCATTCATCTCGACATGAGCTAGTTTTTGGGGTTGAGTTATGCCGTGGTCCAATTCTTTGTCATGGTACCATAGTCAAGTCCATCCCAATTCATGTTTACCTGATGTTGGGCCTCCCATCTTATATTTTCTTCGCTCCAAAGGTTCAACCTTGAGCGCGTGCGACCGGGGTGGGTGGGTAGGGGGTTGGGGTTAAGGTTACCTAGTCTTTATATGATGTGGGCAATTCTTCCCTCATGAGCTAGCTTTAGGATTGAGTTAGACCCAAGGTTGTTTTTTATTTCAGAAGGTGAACAAGAAGATCGAAGGCGTCGGATGATGCTCCATTAGCCTTTATGTGGGTTATATTGAAAGAGAAAAAATAGGATAACATTTGAAGGGGTTGACAATGACTCTGTTAAATTAAAAAAGTAGCCTCTTGTGTATGATATCTCTTTGGTGTACCTATGAGGTTCCTATTTGTGTAGAAGACCGGATATCTTCTGTTGAGAACCATACATTTGTTTAGGTTTCTATACTTTTTGATATTTGACTTGTATTACCGATTTCCCATCATTGATAGTATTGCTTATTAAATTAATGAAAAAGGAGAAATGGTAAATGAAATTGCCTTATTGAATATATGACAGCTGTTTGAATAGTGCTAATTATGTCGTACACATTTTGATTGAACAGCCTCATTAGCTGCAAAGGCACAATATCTTATGCTAATGCCTTCCTTTTCCTCTTCATTCTTATTTGCTGTCCGTTGGTACCTCTGTTCTTCTCTTACCTCTTATTTGTGCATTCATTCATCTGTATATTATATGTTATTTGGCAGTTGATCCTCTTCTAAAATTTACCAAAAATTGATTAGCCTAGTTCTCTTGACATGGCTCATTGTAGATTATAGTGAATCCTCATATTTATGTCTGAATATATTTTCCCAACTGCCAATGTGGTTAGCAGAGAGCGATAGGATGGGGTTGGAAGGCATCTGATATGCAAAATATATGATTATATAAGTATTATGTTTGAGGTCAGGGTCAACTATACATTTGGTGCATAATTTAGAACAAGGACCAGCTCAAAATTGTTTTCTTCTTGTTTCCATTTAACTTCTTAATTTTTCTTATAACTCTCCTTGGCAGACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATT</genome_strand>
        <mrna_strand>CGCTTTAATCTCCACAGAGTACCTGAAACTCCACGGTGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAACAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCCTTTGAGCAGTACATCACCATCTTCAGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E379654" ref_strand="+" ref_description="SGN-E379654 [TUS-3-O9]">
      <seq>taaagccaacccccaaaatctctcataaggacttccaatgtctcctccgtcgccggtcccgagccctctctcgcctccaaaatcctcccgatgtctctcctaccaccgccaccgcttcaaaccctaaccctaacctcaaaactgataccaaatccaaacctgaggatgaggttcctgtttcgattccagtgaagatcgagaaggaggaagaggatgttcgagtggagaatgtgaaagagccggagaaattggttgattcatctgctgtcgtggttgaacctaagcttgaggttttggaaaacgatcagaaattggagggtcagactagcaacaaagaggatgcaactgataatcagaaaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcgtttgagcagtacatcaccatcttcagattctcaactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94452" stop="101335"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94752" g_stop="95074" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="323" r_length="323" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95075" i_stop="100536" i_length="5462">
            <donor d_prob="0.391" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100537" g_stop="100644" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="431" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100781" g_stop="101035" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="686" r_length="255" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E379654" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>686</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E379654" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94752" e_stop="95074"/>
          <exon e_start="100537" e_stop="100644"/>
          <exon e_start="100781" e_stop="101035"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAGGTATTGAATTGCAATTATTGATCTATTTTGTTTGTATGGTGTTATCCATGGATTTTGCTGGCTTTAGTTATGATTCGCTTATGCATCTTTCTGTTTTCTCTTAGTAAGGAAGGGATCCCAGCCAATTCAGGGTAGAAGTTAAGGGTGTGTATACCTTACGAAGCTTTTTACCCTTTTTGCGATGAGGCTGCTCCAAGTCTGGACTCTCCAACCATGACCTACAGCTTTTCCTCATTTTTGTTTATTATGTTTAGGAATTCTTAATATATGTCAATAAAAAAATATGTATCAGATGATTTGTAAGAACTAATACTGTTTATTTCTATGGAAGAGCGTAATGATATATGTGTAGTTGGTTTAAGACTAGCATTTTTTTAGCAGAAGCGTCATGTACTGATTAGAGATGAGGAGGTATATTTGCCTGAGGGTTGGGATACTTACATTAGATCTGTTCGGGGGATACTGCTTTCAGAAATTAAGGATAAATGGAGAGACAGTGAATGCTACATGCTACATTGGATTTATGGAGATAGGGAGAAGAGTCGTTCTTTCCGTATAGGGTGCCCATGAAGGTGTGTTTCCTTGCTTGATTAGGGGCGGGTGAAGTGATATTGATGGCTGAGAACATGAGATAGAAAAGGAGCACCTATGTTGGTGTTACATCTACAGATGTTTGGGTGAATACGTAGACCTGTCTCCTGTTACATTTTCAGGTGGTTGTGCACTCATTGTTGGCAATTCTGAATCGTTTGGTGGATACATGAGTATTTGTCAGAGTTTCTCTATATCGGAAGCAATCTGTAATTCCAGACTTTTCACCTACTCGTTTAACCGGAACCCAACATACTAAATTTAAGAGAATATCAAATATGAAGTCGGTCGCTTTCACAAAACTTTAGACGTTCCCAGTTACTTCTTTACTGACACAAGCCAAAACCAAATTTACAAGACCGACACAAGGAGGAAAACTCTAGGATTTAAGCAAAATAATATACTATATTAGTCTAAATAGAATGATGTCCCATGCGAGGTAAGTGCGGAGCTTGTTAGCTCTGTGACTCTGTATGAGTCAAAGTGTCACCCTTAAATGAATTATCTTTGGGGGGGGGGGAGGAGTTGGATTCAGTTGCACTAATTGCGTGAGTAATAACATCAACCATACATTTTATATGGAGCAGGTATACATAAGGAATCATGCAATTTATAAGATCCTCAACTATGTCCTACTTAAATCAATATAGCCTAAGTTGCTCGGGTGTGGTTTCCGATAATGCGGACCTAGAGCTCAAATCCTATATGATCTAAATTTTTAGATTTGGGTATATGGATCCATGTATGGATATGGGAGCGGGGGTTCGGCTAAAAATAATTCAAATAGCTAAAAATAGAGTTATAAAGCCTAAGTTATGAGATATTATATGGACGTCTTGAGATGAAAATGTTGATCAAGAGGAGAAAGAGATAAAAGGAAAAAGAGTGACAATAGAAATTAATATATCCAAGGTATTTCATTTCTTCAATTTCACCTTAATTTTTGTTTTGCGCATATAAATCATTGAATCTGTCCAAATTTCTCCCTCAAATTTGGTTTAAGTATCCCAAATTGGTTGACCATATCGTTTACGGATGCCACACCATCACTCACACCCGTTTCGTGTCGACATGGGTGCGAGAACAAAGGCGAAGAGTCCGTGCAACTTAGGATATAACCATTGTTGTGAAAAGCGCAGAAAAAGCGCGCTTCAAAGCGACACGACCCTTGTGCGCTTTTTTATCTTGAGGCGAGGCGATCTGAAGAAAACTCTCGCTTCAGATGAAGAAGCGACCCTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAAAAGCGACAATTAGTTTTTTTTTAATAAAAAAATTAGGTTTTTTTTTATAAAAAAATCTGAAATATAACCTTCTCTCTCCTCACGACTCTTTTCCTTCTTTCTCTTCTCGCAACTCTTCTTTCACAACACTTCTTTCCCTTCTTTCTCTCCTCGCAGCTCTTCTTTCACAATACTTCTTTCCCTTCTTTCTCTCCTGACGATCTCGACTGAGTCTGCCTCTTTCTTCAACCTCGACTGTAGGTAACTTTTTGTTCATCTCTTTTTTAGCTAATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATCAATCTTTGCCTGTGCTTCATCTCTTCATCTCTCTGAGTTTCAACTACTCTAGTTTTTTCTTCTTCTTCTCTTCTTTTCTTCATCTCTGCTGCTTGCTCTGTTTCTAATTACTGACTGCTGCCTCCTCTGTTTTTTTTTTCTTCAATTCTTTTGCTTTTTTTTATTTTTTTATTTTGTGATCAGTCTAGCAGCCTTGTTGAAGAATAGGAGTTTGAATCTTTGTGACTTAATTATATTTTTGATTTTTTGCTTTATATGTTATGACTTATGAGTATTTTTGCCTATGTAATTTCTTTCAATCTAAGACTATATTACCTCTATTTAGTTATTTAATATTTTTTATTTTTATACTAAATGTCGCTTTTTTTTTCTAAAAAAAAGCGCGCTTCGCTTCTGTGAAGCAAGCCTTCGTAGCTTTTTTCCGCTTCTCGCTTCCCAAAACACGGATATAACAATTCGTGTGTGAAATAAATGATCAAAATGGATGAAAATATACATTTTAGATCCATTTATCCTTTTCTACTTAATATCCTTATATAGTGGGAGATACATTAACCAAAATCGATGTAAATTTGGACACCACAAGTCTATCATGGCTTTCTGACTATCCCATCAGCTAGGTTCCCTTCTAGAGGGCTCAAGTGTGATATTCATATTACTGGTTCTTTCCTGCTAGTATAGGAAAATATTATACAAGGTGCGACCATGTCTAGTGACCTCAACGTTAGATGATAGTGATCTAGCAAAGCTTACTCCTGAAGTATCTTCCTTACAACAACAACATACCCAGTATGATCCCACATAGTTAGGGTCTAGGGAAGGTAGAGTTTACACAGAACTTAACCCTACCTCAGAGGTATTGAAGTATCTTCCATATAAGACAAAATGTTGTCATATTTTTTTGTGTTAAGAATTTATTCCAATAGTATATATAGCAACTAGGTTTAAGGATAATCAATATGTCAAAGTCATTATAAAGATGATTTTGTACATTTCCAATTGTGGACCATACTTTCACTTGTTCGTGTGCAGGTAATCGATTTGTTTTTTATAAATCGTTTCAATGCAAGAATACAAACTCAAAATTATGCTATAATTGAAATTCAACTATGAAAGAATTATAACTCATAGTACTATTGCTGAAAACTCCAATTTGATAATTGCGTCGTCAAAGTATCAAATATCTTATAATAGGTCATAACTTTGTATCTTAATCATTCATAGAACTTGTGAAATTCCATGTTTTTAGCAATAAGATCTCAATTTCCCAATTCGACTCTAACATTAACTCTTAACATTAAGTCGATGTGGGTTTATTAGTTTGGCTGTATTCTCCATTCTAAAAAAAGTTTATCAGGAATCCTAAATAGCAAATGATGAAACTGCTAGTTCAAGAATAAAGACAAAACTTGTGTTTATATCATGTTACTCCGAGCCAACTTTAAATAAAGTGTTGTCTTAGCAGTTAGCACCGTTTCGGGAAAAATATATTTTCGATCATCAAGTTTGAAACCTAAATCAACTTCTTCCCCAAATTGAAAGCTTCTTTAAAATTCCAGATTATTGCCTCCTCAAATCTCCATTTATGAACAAGGTATTTTAACTTTTGATATAATGTTGAATCTAGTGCTGAATACCTCATTAATTTAAGGTCGCTTCACTCCTATTTCCTACTGTTTTATACCCTAAAGAAGAATTTAGTTAGTTGAATATGGTTTTAAAGAGTGACCTGAATTGTGATTACAGCAAAAAAATTTGCTTCTTCTCCTTTAGCTTGTGCTTAGGTTTTAAAGGTAGTAACTTCTATTTATGATCTTGAAGTTCTTCTTATTTTTTTTTTTGCTTTCTTGCTTCCTTTCCTTTTTTTTTCCTTCTTTCCTGTAGCTCTTGTTTCCCCCTTGCGAAATGCTGTTGGAAAGCTTCCTCTTAAAACCAGTGCTGCTGGCTTTTGTCTCTATTGCCAACCGCTCCTCTTCTTTTTTTCTCCTTTTTTAATAGCCGACGGGTCAAGGATAATGGGCTGGCTATTTTAGTTACTCGCTTATTTTAAATGTGCCAAGTCCAATTCTTTAAGTCATTACACACGTTGTGGGTCAGTGGTTATTTGGTCTCTTTTTTATGGTCCTATCCATTCATCTCGACATGAGCTAGTTTTTGGGGTTGAGTTATGCCGTGGTCCAATTCTTTGTCATGGTACCATAGTCAAGTCCATCCCAATTCATGTTTACCTGATGTTGGGCCTCCCATCTTATATTTTCTTCGCTCCAAAGGTTCAACCTTGAGCGCGTGCGACCGGGGTGGGTGGGTAGGGGGTTGGGGTTAAGGTTACCTAGTCTTTATATGATGTGGGCAATTCTTCCCTCATGAGCTAGCTTTAGGATTGAGTTAGACCCAAGGTTGTTTTTTATTTCAGAAGGTGAACAAGAAGATCGAAGGCGTCGGATGATGCTCCATTAGCCTTTATGTGGGTTATATTGAAAGAGAAAAAATAGGATAACATTTGAAGGGGTTGACAATGACTCTGTTAAATTAAAAAAGTAGCCTCTTGTGTATGATATCTCTTTGGTGTACCTATGAGGTTCCTATTTGTGTAGAAGACCGGATATCTTCTGTTGAGAACCATACATTTGTTTAGGTTTCTATACTTTTTGATATTTGACTTGTATTACCGATTTCCCATCATTGATAGTATTGCTTATTAAATTAATGAAAAAGGAGAAATGGTAAATGAAATTGCCTTATTGAATATATGACAGCTGTTTGAATAGTGCTAATTATGTCGTACACATTTTGATTGAACAGCCTCATTAGCTGCAAAGGCACAATATCTTATGCTAATGCCTTCCTTTTCCTCTTCATTCTTATTTGCTGTCCGTTGGTACCTCTGTTCTTCTCTTACCTCTTATTTGTGCATTCATTCATCTGTATATTATATGTTATTTGGCAGTTGATCCTCTTCTAAAATTTACCAAAAATTGATTAGCCTAGTTCTCTTGACATGGCTCATTGTAGATTATAGTGAATCCTCATATTTATGTCTGAATATATTTTCCCAACTGCCAATGTGGTTAGCAGAGAGCGATAGGATGGGGTTGGAAGGCATCTGATATGCAAAATATATGATTATATAAGTATTATGTTTGAGGTCAGGGTCAACTATACATTTGGTGCATAATTTAGAACAAGGACCAGCTCAAAATTGTTTTCTTCTTGTTTCCATTTAACTTCTTAATTTTTCTTATAACTCTCCTTGGCAGACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTG</genome_strand>
        <mrna_strand>TAAAGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E207913" ref_strand="+" ref_description="SGN-E207913 [cLEC-34-M24]">
      <seq>gtgccaacccccaaaatctgtcataaggacttccaatgtctcctacgacgccggtcccgagccctctctcgcctccaaaatcctgccgatgtctctcctaccaccgccaccgcttcaaaccctaaccctaacctcaaaactgataccaaatccaaacctgaggatgaggttcctgcttcgattccagtgaagatcgagaaggaggaataggatgttctagtggagaatgtgaaagagccggccaaattggttgattcatctgctgtcgtggttgaacctaagcttgaggttttggaaaacgatcacaaattggagggtcagactagcaacaaagaggatgcagctgattatcagaaaagaaaggagattgaggatcaattacaagctctgaatatgaaaaagcatgggttggttcaattactaaaacagattttgaatgcagaagaggagctgaagagacgaatcatgcaaagaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94454" stop="101214"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94754" g_stop="95074" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="321" r_length="321" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95075" i_stop="100536" i_length="5462">
            <donor d_prob="0.391" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100537" g_stop="100644" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="429" r_length="108" r_score="0.944"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100781" g_stop="100914" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="563" r_length="134" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E207913" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>563</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E207913" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94754" e_stop="95074"/>
          <exon e_start="100537" e_stop="100644"/>
          <exon e_start="100781" e_stop="100914"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAGGTATTGAATTGCAATTATTGATCTATTTTGTTTGTATGGTGTTATCCATGGATTTTGCTGGCTTTAGTTATGATTCGCTTATGCATCTTTCTGTTTTCTCTTAGTAAGGAAGGGATCCCAGCCAATTCAGGGTAGAAGTTAAGGGTGTGTATACCTTACGAAGCTTTTTACCCTTTTTGCGATGAGGCTGCTCCAAGTCTGGACTCTCCAACCATGACCTACAGCTTTTCCTCATTTTTGTTTATTATGTTTAGGAATTCTTAATATATGTCAATAAAAAAATATGTATCAGATGATTTGTAAGAACTAATACTGTTTATTTCTATGGAAGAGCGTAATGATATATGTGTAGTTGGTTTAAGACTAGCATTTTTTTAGCAGAAGCGTCATGTACTGATTAGAGATGAGGAGGTATATTTGCCTGAGGGTTGGGATACTTACATTAGATCTGTTCGGGGGATACTGCTTTCAGAAATTAAGGATAAATGGAGAGACAGTGAATGCTACATGCTACATTGGATTTATGGAGATAGGGAGAAGAGTCGTTCTTTCCGTATAGGGTGCCCATGAAGGTGTGTTTCCTTGCTTGATTAGGGGCGGGTGAAGTGATATTGATGGCTGAGAACATGAGATAGAAAAGGAGCACCTATGTTGGTGTTACATCTACAGATGTTTGGGTGAATACGTAGACCTGTCTCCTGTTACATTTTCAGGTGGTTGTGCACTCATTGTTGGCAATTCTGAATCGTTTGGTGGATACATGAGTATTTGTCAGAGTTTCTCTATATCGGAAGCAATCTGTAATTCCAGACTTTTCACCTACTCGTTTAACCGGAACCCAACATACTAAATTTAAGAGAATATCAAATATGAAGTCGGTCGCTTTCACAAAACTTTAGACGTTCCCAGTTACTTCTTTACTGACACAAGCCAAAACCAAATTTACAAGACCGACACAAGGAGGAAAACTCTAGGATTTAAGCAAAATAATATACTATATTAGTCTAAATAGAATGATGTCCCATGCGAGGTAAGTGCGGAGCTTGTTAGCTCTGTGACTCTGTATGAGTCAAAGTGTCACCCTTAAATGAATTATCTTTGGGGGGGGGGGAGGAGTTGGATTCAGTTGCACTAATTGCGTGAGTAATAACATCAACCATACATTTTATATGGAGCAGGTATACATAAGGAATCATGCAATTTATAAGATCCTCAACTATGTCCTACTTAAATCAATATAGCCTAAGTTGCTCGGGTGTGGTTTCCGATAATGCGGACCTAGAGCTCAAATCCTATATGATCTAAATTTTTAGATTTGGGTATATGGATCCATGTATGGATATGGGAGCGGGGGTTCGGCTAAAAATAATTCAAATAGCTAAAAATAGAGTTATAAAGCCTAAGTTATGAGATATTATATGGACGTCTTGAGATGAAAATGTTGATCAAGAGGAGAAAGAGATAAAAGGAAAAAGAGTGACAATAGAAATTAATATATCCAAGGTATTTCATTTCTTCAATTTCACCTTAATTTTTGTTTTGCGCATATAAATCATTGAATCTGTCCAAATTTCTCCCTCAAATTTGGTTTAAGTATCCCAAATTGGTTGACCATATCGTTTACGGATGCCACACCATCACTCACACCCGTTTCGTGTCGACATGGGTGCGAGAACAAAGGCGAAGAGTCCGTGCAACTTAGGATATAACCATTGTTGTGAAAAGCGCAGAAAAAGCGCGCTTCAAAGCGACACGACCCTTGTGCGCTTTTTTATCTTGAGGCGAGGCGATCTGAAGAAAACTCTCGCTTCAGATGAAGAAGCGACCCTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAAAAGCGACAATTAGTTTTTTTTTAATAAAAAAATTAGGTTTTTTTTTATAAAAAAATCTGAAATATAACCTTCTCTCTCCTCACGACTCTTTTCCTTCTTTCTCTTCTCGCAACTCTTCTTTCACAACACTTCTTTCCCTTCTTTCTCTCCTCGCAGCTCTTCTTTCACAATACTTCTTTCCCTTCTTTCTCTCCTGACGATCTCGACTGAGTCTGCCTCTTTCTTCAACCTCGACTGTAGGTAACTTTTTGTTCATCTCTTTTTTAGCTAATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATCAATCTTTGCCTGTGCTTCATCTCTTCATCTCTCTGAGTTTCAACTACTCTAGTTTTTTCTTCTTCTTCTCTTCTTTTCTTCATCTCTGCTGCTTGCTCTGTTTCTAATTACTGACTGCTGCCTCCTCTGTTTTTTTTTTCTTCAATTCTTTTGCTTTTTTTTATTTTTTTATTTTGTGATCAGTCTAGCAGCCTTGTTGAAGAATAGGAGTTTGAATCTTTGTGACTTAATTATATTTTTGATTTTTTGCTTTATATGTTATGACTTATGAGTATTTTTGCCTATGTAATTTCTTTCAATCTAAGACTATATTACCTCTATTTAGTTATTTAATATTTTTTATTTTTATACTAAATGTCGCTTTTTTTTTCTAAAAAAAAGCGCGCTTCGCTTCTGTGAAGCAAGCCTTCGTAGCTTTTTTCCGCTTCTCGCTTCCCAAAACACGGATATAACAATTCGTGTGTGAAATAAATGATCAAAATGGATGAAAATATACATTTTAGATCCATTTATCCTTTTCTACTTAATATCCTTATATAGTGGGAGATACATTAACCAAAATCGATGTAAATTTGGACACCACAAGTCTATCATGGCTTTCTGACTATCCCATCAGCTAGGTTCCCTTCTAGAGGGCTCAAGTGTGATATTCATATTACTGGTTCTTTCCTGCTAGTATAGGAAAATATTATACAAGGTGCGACCATGTCTAGTGACCTCAACGTTAGATGATAGTGATCTAGCAAAGCTTACTCCTGAAGTATCTTCCTTACAACAACAACATACCCAGTATGATCCCACATAGTTAGGGTCTAGGGAAGGTAGAGTTTACACAGAACTTAACCCTACCTCAGAGGTATTGAAGTATCTTCCATATAAGACAAAATGTTGTCATATTTTTTTGTGTTAAGAATTTATTCCAATAGTATATATAGCAACTAGGTTTAAGGATAATCAATATGTCAAAGTCATTATAAAGATGATTTTGTACATTTCCAATTGTGGACCATACTTTCACTTGTTCGTGTGCAGGTAATCGATTTGTTTTTTATAAATCGTTTCAATGCAAGAATACAAACTCAAAATTATGCTATAATTGAAATTCAACTATGAAAGAATTATAACTCATAGTACTATTGCTGAAAACTCCAATTTGATAATTGCGTCGTCAAAGTATCAAATATCTTATAATAGGTCATAACTTTGTATCTTAATCATTCATAGAACTTGTGAAATTCCATGTTTTTAGCAATAAGATCTCAATTTCCCAATTCGACTCTAACATTAACTCTTAACATTAAGTCGATGTGGGTTTATTAGTTTGGCTGTATTCTCCATTCTAAAAAAAGTTTATCAGGAATCCTAAATAGCAAATGATGAAACTGCTAGTTCAAGAATAAAGACAAAACTTGTGTTTATATCATGTTACTCCGAGCCAACTTTAAATAAAGTGTTGTCTTAGCAGTTAGCACCGTTTCGGGAAAAATATATTTTCGATCATCAAGTTTGAAACCTAAATCAACTTCTTCCCCAAATTGAAAGCTTCTTTAAAATTCCAGATTATTGCCTCCTCAAATCTCCATTTATGAACAAGGTATTTTAACTTTTGATATAATGTTGAATCTAGTGCTGAATACCTCATTAATTTAAGGTCGCTTCACTCCTATTTCCTACTGTTTTATACCCTAAAGAAGAATTTAGTTAGTTGAATATGGTTTTAAAGAGTGACCTGAATTGTGATTACAGCAAAAAAATTTGCTTCTTCTCCTTTAGCTTGTGCTTAGGTTTTAAAGGTAGTAACTTCTATTTATGATCTTGAAGTTCTTCTTATTTTTTTTTTTGCTTTCTTGCTTCCTTTCCTTTTTTTTTCCTTCTTTCCTGTAGCTCTTGTTTCCCCCTTGCGAAATGCTGTTGGAAAGCTTCCTCTTAAAACCAGTGCTGCTGGCTTTTGTCTCTATTGCCAACCGCTCCTCTTCTTTTTTTCTCCTTTTTTAATAGCCGACGGGTCAAGGATAATGGGCTGGCTATTTTAGTTACTCGCTTATTTTAAATGTGCCAAGTCCAATTCTTTAAGTCATTACACACGTTGTGGGTCAGTGGTTATTTGGTCTCTTTTTTATGGTCCTATCCATTCATCTCGACATGAGCTAGTTTTTGGGGTTGAGTTATGCCGTGGTCCAATTCTTTGTCATGGTACCATAGTCAAGTCCATCCCAATTCATGTTTACCTGATGTTGGGCCTCCCATCTTATATTTTCTTCGCTCCAAAGGTTCAACCTTGAGCGCGTGCGACCGGGGTGGGTGGGTAGGGGGTTGGGGTTAAGGTTACCTAGTCTTTATATGATGTGGGCAATTCTTCCCTCATGAGCTAGCTTTAGGATTGAGTTAGACCCAAGGTTGTTTTTTATTTCAGAAGGTGAACAAGAAGATCGAAGGCGTCGGATGATGCTCCATTAGCCTTTATGTGGGTTATATTGAAAGAGAAAAAATAGGATAACATTTGAAGGGGTTGACAATGACTCTGTTAAATTAAAAAAGTAGCCTCTTGTGTATGATATCTCTTTGGTGTACCTATGAGGTTCCTATTTGTGTAGAAGACCGGATATCTTCTGTTGAGAACCATACATTTGTTTAGGTTTCTATACTTTTTGATATTTGACTTGTATTACCGATTTCCCATCATTGATAGTATTGCTTATTAAATTAATGAAAAAGGAGAAATGGTAAATGAAATTGCCTTATTGAATATATGACAGCTGTTTGAATAGTGCTAATTATGTCGTACACATTTTGATTGAACAGCCTCATTAGCTGCAAAGGCACAATATCTTATGCTAATGCCTTCCTTTTCCTCTTCATTCTTATTTGCTGTCCGTTGGTACCTCTGTTCTTCTCTTACCTCTTATTTGTGCATTCATTCATCTGTATATTATATGTTATTTGGCAGTTGATCCTCTTCTAAAATTTACCAAAAATTGATTAGCCTAGTTCTCTTGACATGGCTCATTGTAGATTATAGTGAATCCTCATATTTATGTCTGAATATATTTTCCCAACTGCCAATGTGGTTAGCAGAGAGCGATAGGATGGGGTTGGAAGGCATCTGATATGCAAAATATATGATTATATAAGTATTATGTTTGAGGTCAGGGTCAACTATACATTTGGTGCATAATTTAGAACAAGGACCAGCTCAAAATTGTTTTCTTCTTGTTTCCATTTAACTTCTTAATTTTTCTTATAACTCTCCTTGGCAGACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTT</genome_strand>
        <mrna_strand>GTGCCAACCCCCAAAATCTGTCATAAGGACTTCCAATGTCTCCTACGACGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTGCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGCTTCGATTCCAGTGAAGATCGAGAAGGAGGAATAGGATGTTCTAGTGGAGAATGTGAAAGAGCCGGCCAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCACAAATTGGAGGGTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGCAACAAAGAGGATGCAGCTGATTATCAGAAAAGAAAGGAGATTGAGGATCAATTACAAGCTCTGAATATGAAAAAGCATGGGTTGGTTCAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAATCATGCAAAGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E731222" ref_strand="+" ref_description="SGN-E731222 [LA26CA07]">
      <seq>cctccgtcgccggtcccgagccctctctcgcctccaaaatcctcccgatgtctctcctaccaccgccaccgcttcaaaccctaaccctaacctcaaaactgataccaaatccaaacctgaggatgaggttcctgtttcgattccagtgaagatcgagaaggaggaagaggatgttcgagtggagaatgtgaaagagccggagaaattggttgattcatctgctgtcgtggttgaacctaagcttgaggttttggaaaacgatcagaaattggagggtcaggtgaatccctctggtgtggagactagcaacaaagaggatgcaactgataatcagaaaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcgtttgagcagtacatcaccatcttcagatttctcactgaggaagaacccctataatgtgggtcctctcgcttcacgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94495" stop="104218"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94795" g_stop="95095" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="301" r_length="301" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95096" i_stop="100536" i_length="5441">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100537" g_stop="100644" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="409" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100781" g_stop="101056" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="410" r_stop="685" r_length="276" r_score="0.982"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843">
            <donor d_prob="0.934" d_score="0.90"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103900" g_stop="103918" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="686" r_stop="704" r_length="19" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E731222" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>704</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E731222" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94795" e_stop="95095"/>
          <exon e_start="100537" e_stop="100644"/>
          <exon e_start="100781" e_stop="101056"/>
          <exon e_start="103900" e_stop="103918"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAGGTATTGAATTGCAATTATTGATCTATTTTGTTTGTATGGTGTTATCCATGGATTTTGCTGGCTTTAGTTATGATTCGCTTATGCATCTTTCTGTTTTCTCTTAGTAAGGAAGGGATCCCAGCCAATTCAGGGTAGAAGTTAAGGGTGTGTATACCTTACGAAGCTTTTTACCCTTTTTGCGATGAGGCTGCTCCAAGTCTGGACTCTCCAACCATGACCTACAGCTTTTCCTCATTTTTGTTTATTATGTTTAGGAATTCTTAATATATGTCAATAAAAAAATATGTATCAGATGATTTGTAAGAACTAATACTGTTTATTTCTATGGAAGAGCGTAATGATATATGTGTAGTTGGTTTAAGACTAGCATTTTTTTAGCAGAAGCGTCATGTACTGATTAGAGATGAGGAGGTATATTTGCCTGAGGGTTGGGATACTTACATTAGATCTGTTCGGGGGATACTGCTTTCAGAAATTAAGGATAAATGGAGAGACAGTGAATGCTACATGCTACATTGGATTTATGGAGATAGGGAGAAGAGTCGTTCTTTCCGTATAGGGTGCCCATGAAGGTGTGTTTCCTTGCTTGATTAGGGGCGGGTGAAGTGATATTGATGGCTGAGAACATGAGATAGAAAAGGAGCACCTATGTTGGTGTTACATCTACAGATGTTTGGGTGAATACGTAGACCTGTCTCCTGTTACATTTTCAGGTGGTTGTGCACTCATTGTTGGCAATTCTGAATCGTTTGGTGGATACATGAGTATTTGTCAGAGTTTCTCTATATCGGAAGCAATCTGTAATTCCAGACTTTTCACCTACTCGTTTAACCGGAACCCAACATACTAAATTTAAGAGAATATCAAATATGAAGTCGGTCGCTTTCACAAAACTTTAGACGTTCCCAGTTACTTCTTTACTGACACAAGCCAAAACCAAATTTACAAGACCGACACAAGGAGGAAAACTCTAGGATTTAAGCAAAATAATATACTATATTAGTCTAAATAGAATGATGTCCCATGCGAGGTAAGTGCGGAGCTTGTTAGCTCTGTGACTCTGTATGAGTCAAAGTGTCACCCTTAAATGAATTATCTTTGGGGGGGGGGGAGGAGTTGGATTCAGTTGCACTAATTGCGTGAGTAATAACATCAACCATACATTTTATATGGAGCAGGTATACATAAGGAATCATGCAATTTATAAGATCCTCAACTATGTCCTACTTAAATCAATATAGCCTAAGTTGCTCGGGTGTGGTTTCCGATAATGCGGACCTAGAGCTCAAATCCTATATGATCTAAATTTTTAGATTTGGGTATATGGATCCATGTATGGATATGGGAGCGGGGGTTCGGCTAAAAATAATTCAAATAGCTAAAAATAGAGTTATAAAGCCTAAGTTATGAGATATTATATGGACGTCTTGAGATGAAAATGTTGATCAAGAGGAGAAAGAGATAAAAGGAAAAAGAGTGACAATAGAAATTAATATATCCAAGGTATTTCATTTCTTCAATTTCACCTTAATTTTTGTTTTGCGCATATAAATCATTGAATCTGTCCAAATTTCTCCCTCAAATTTGGTTTAAGTATCCCAAATTGGTTGACCATATCGTTTACGGATGCCACACCATCACTCACACCCGTTTCGTGTCGACATGGGTGCGAGAACAAAGGCGAAGAGTCCGTGCAACTTAGGATATAACCATTGTTGTGAAAAGCGCAGAAAAAGCGCGCTTCAAAGCGACACGACCCTTGTGCGCTTTTTTATCTTGAGGCGAGGCGATCTGAAGAAAACTCTCGCTTCAGATGAAGAAGCGACCCTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAAAAGCGACAATTAGTTTTTTTTTAATAAAAAAATTAGGTTTTTTTTTATAAAAAAATCTGAAATATAACCTTCTCTCTCCTCACGACTCTTTTCCTTCTTTCTCTTCTCGCAACTCTTCTTTCACAACACTTCTTTCCCTTCTTTCTCTCCTCGCAGCTCTTCTTTCACAATACTTCTTTCCCTTCTTTCTCTCCTGACGATCTCGACTGAGTCTGCCTCTTTCTTCAACCTCGACTGTAGGTAACTTTTTGTTCATCTCTTTTTTAGCTAATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATCAATCTTTGCCTGTGCTTCATCTCTTCATCTCTCTGAGTTTCAACTACTCTAGTTTTTTCTTCTTCTTCTCTTCTTTTCTTCATCTCTGCTGCTTGCTCTGTTTCTAATTACTGACTGCTGCCTCCTCTGTTTTTTTTTTCTTCAATTCTTTTGCTTTTTTTTATTTTTTTATTTTGTGATCAGTCTAGCAGCCTTGTTGAAGAATAGGAGTTTGAATCTTTGTGACTTAATTATATTTTTGATTTTTTGCTTTATATGTTATGACTTATGAGTATTTTTGCCTATGTAATTTCTTTCAATCTAAGACTATATTACCTCTATTTAGTTATTTAATATTTTTTATTTTTATACTAAATGTCGCTTTTTTTTTCTAAAAAAAAGCGCGCTTCGCTTCTGTGAAGCAAGCCTTCGTAGCTTTTTTCCGCTTCTCGCTTCCCAAAACACGGATATAACAATTCGTGTGTGAAATAAATGATCAAAATGGATGAAAATATACATTTTAGATCCATTTATCCTTTTCTACTTAATATCCTTATATAGTGGGAGATACATTAACCAAAATCGATGTAAATTTGGACACCACAAGTCTATCATGGCTTTCTGACTATCCCATCAGCTAGGTTCCCTTCTAGAGGGCTCAAGTGTGATATTCATATTACTGGTTCTTTCCTGCTAGTATAGGAAAATATTATACAAGGTGCGACCATGTCTAGTGACCTCAACGTTAGATGATAGTGATCTAGCAAAGCTTACTCCTGAAGTATCTTCCTTACAACAACAACATACCCAGTATGATCCCACATAGTTAGGGTCTAGGGAAGGTAGAGTTTACACAGAACTTAACCCTACCTCAGAGGTATTGAAGTATCTTCCATATAAGACAAAATGTTGTCATATTTTTTTGTGTTAAGAATTTATTCCAATAGTATATATAGCAACTAGGTTTAAGGATAATCAATATGTCAAAGTCATTATAAAGATGATTTTGTACATTTCCAATTGTGGACCATACTTTCACTTGTTCGTGTGCAGGTAATCGATTTGTTTTTTATAAATCGTTTCAATGCAAGAATACAAACTCAAAATTATGCTATAATTGAAATTCAACTATGAAAGAATTATAACTCATAGTACTATTGCTGAAAACTCCAATTTGATAATTGCGTCGTCAAAGTATCAAATATCTTATAATAGGTCATAACTTTGTATCTTAATCATTCATAGAACTTGTGAAATTCCATGTTTTTAGCAATAAGATCTCAATTTCCCAATTCGACTCTAACATTAACTCTTAACATTAAGTCGATGTGGGTTTATTAGTTTGGCTGTATTCTCCATTCTAAAAAAAGTTTATCAGGAATCCTAAATAGCAAATGATGAAACTGCTAGTTCAAGAATAAAGACAAAACTTGTGTTTATATCATGTTACTCCGAGCCAACTTTAAATAAAGTGTTGTCTTAGCAGTTAGCACCGTTTCGGGAAAAATATATTTTCGATCATCAAGTTTGAAACCTAAATCAACTTCTTCCCCAAATTGAAAGCTTCTTTAAAATTCCAGATTATTGCCTCCTCAAATCTCCATTTATGAACAAGGTATTTTAACTTTTGATATAATGTTGAATCTAGTGCTGAATACCTCATTAATTTAAGGTCGCTTCACTCCTATTTCCTACTGTTTTATACCCTAAAGAAGAATTTAGTTAGTTGAATATGGTTTTAAAGAGTGACCTGAATTGTGATTACAGCAAAAAAATTTGCTTCTTCTCCTTTAGCTTGTGCTTAGGTTTTAAAGGTAGTAACTTCTATTTATGATCTTGAAGTTCTTCTTATTTTTTTTTTTGCTTTCTTGCTTCCTTTCCTTTTTTTTTCCTTCTTTCCTGTAGCTCTTGTTTCCCCCTTGCGAAATGCTGTTGGAAAGCTTCCTCTTAAAACCAGTGCTGCTGGCTTTTGTCTCTATTGCCAACCGCTCCTCTTCTTTTTTTCTCCTTTTTTAATAGCCGACGGGTCAAGGATAATGGGCTGGCTATTTTAGTTACTCGCTTATTTTAAATGTGCCAAGTCCAATTCTTTAAGTCATTACACACGTTGTGGGTCAGTGGTTATTTGGTCTCTTTTTTATGGTCCTATCCATTCATCTCGACATGAGCTAGTTTTTGGGGTTGAGTTATGCCGTGGTCCAATTCTTTGTCATGGTACCATAGTCAAGTCCATCCCAATTCATGTTTACCTGATGTTGGGCCTCCCATCTTATATTTTCTTCGCTCCAAAGGTTCAACCTTGAGCGCGTGCGACCGGGGTGGGTGGGTAGGGGGTTGGGGTTAAGGTTACCTAGTCTTTATATGATGTGGGCAATTCTTCCCTCATGAGCTAGCTTTAGGATTGAGTTAGACCCAAGGTTGTTTTTTATTTCAGAAGGTGAACAAGAAGATCGAAGGCGTCGGATGATGCTCCATTAGCCTTTATGTGGGTTATATTGAAAGAGAAAAAATAGGATAACATTTGAAGGGGTTGACAATGACTCTGTTAAATTAAAAAAGTAGCCTCTTGTGTATGATATCTCTTTGGTGTACCTATGAGGTTCCTATTTGTGTAGAAGACCGGATATCTTCTGTTGAGAACCATACATTTGTTTAGGTTTCTATACTTTTTGATATTTGACTTGTATTACCGATTTCCCATCATTGATAGTATTGCTTATTAAATTAATGAAAAAGGAGAAATGGTAAATGAAATTGCCTTATTGAATATATGACAGCTGTTTGAATAGTGCTAATTATGTCGTACACATTTTGATTGAACAGCCTCATTAGCTGCAAAGGCACAATATCTTATGCTAATGCCTTCCTTTTCCTCTTCATTCTTATTTGCTGTCCGTTGGTACCTCTGTTCTTCTCTTACCTCTTATTTGTGCATTCATTCATCTGTATATTATATGTTATTTGGCAGTTGATCCTCTTCTAAAATTTACCAAAAATTGATTAGCCTAGTTCTCTTGACATGGCTCATTGTAGATTATAGTGAATCCTCATATTTATGTCTGAATATATTTTCCCAACTGCCAATGTGGTTAGCAGAGAGCGATAGGATGGGGTTGGAAGGCATCTGATATGCAAAATATATGATTATATAAGTATTATGTTTGAGGTCAGGGTCAACTATACATTTGGTGCATAATTTAGAACAAGGACCAGCTCAAAATTGTTTTCTTCTTGTTTCCATTTAACTTCTTAATTTTTCTTATAACTCTCCTTGGCAGACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTGGTAAGTGCCCTATCTATGCGTGCATTGTTACCTTTGGCTTTCATTTGTGGCGCTACACCACCAGGAGTGGAAAAAGAGGGCTTTAATTTTTGTTTCTAATATAATTAATCTAGCAAAGATTTAAAAAGTTTTAAGTAAAGCAACAACATTCAATATGTGCAAGACTGCAAGTTAGTTCATCATATTATTGCTGGTTCACTCCCTTGAACCAAGTCTTCTATTTATCTTCTTCCTCAATGGAGCAGATCTTAATTTTTCTTTCATAGAACCATGTCCAAGGCATCTCGAAATGTGTGCTCTTGGTAACATTTGCTGAAAATTAAGGACCCCATATTGAACTTCTATTGGACATGAGATTTTGTTACAATTGTGTCTCTGTAACTAGTTTTGAGCTGTTCCAATCATTTTCTGCCACTTGTTGGACTAATTGGACCTTGCAATAAATTATGTTGCTACTTTGCACATGCCATAATAAGGGTTAGTGCTTTGACTAAGGGAAGATGATATATGTATATATATATATATGTATATATATATATATTATCTTGTTGTTGCATCAATGGAGAAGTTTATGTGCTATTTTACCTTGTTAATACTAGTTGTAAGAGCAAAAATTACTTTGTGGCCATTTTCTTCAGTGCAAACTGGGAATCAACATGTGGGATGAGGGATTATTGGAGTTATATATCAGCCTTCAACCACTTCCCCTTGATGTGAAATTTTCAGTCCCCTTTCTTTGTGAATAATGGAGTTCCAGAGAATGTACGATGTTCGGAGACTTGAACCAAGAGGTGCATCCTTAGATTACGTTAGGGCAATTAAATACATGTACTATGGAGCAAGGAAACTCAGATCACTTCTCGTTGTGATGGGGTTGCACCAGGGATCGACACATAGCCCATTTCTAGTTACTAACACGACTTATCCTAGGAAAAGTCCATGATATATGCTCTTTGCAGATGACAATGTGGTAATGAGACCAGGACAGAGTTAACAATAGGTGCCTTAACAATATATTGGAAATTTGAGGACAGACGTTGGAGTATAAAGAGTCTGGGTTGAGTAGGACTTAGACAAAATACTTGAAGTTCAAGTTCAATGACGTAAAACACATGGTAGATGTGGAAGTAAGGATTGAAACAAGCAGGGATCAATGATTCAGGAAAATAAGGAGATAGACGAAGATGTTACACATTGTATTGGAGCAGGTGGATGACGTTCACTGTCTTTTATGATAAGATTGTACCACCAAAGCCTTAAGGTAGGTATTACAAAGTGGTGGTCAGACTAGCTATGGACAGAGTGTTGACTAGACAAGAACTCGCATGTATAGAAGATGAGAGTAGTAGAAATGAGAATGTTGAGTTGGATGTTTGGGCATACTAAGATTGAGATTAGGAATGAAGCTATACGCGACATTGTGGGATAGGGCGCCTTGGTGAACAAGATGAGGCATGTGAAGCTGAGATGGTTCGAACATGTGAAGGAAACATGCATGAATACCCCGATTAGGAGCGAGAGGTTGGCTATAGAGGATGTAACATGATGTAGAGGTAGACCGAGAAGTCTCAAAAGAAATGATTAGATAGGACATGACTCATGCAGCTTACCTTTATGAGGACATGACCTTGGCCCTAGATAGGAAGATATGGCGGTCAAAAATTAGGGTAGAAGGTCAGTAGGTCGAACATTGTCTTGTTCTCTCTTACTGTCTTATTCGATTTTAGTATTACATGATTTTTCATTTGCTAACAGCTACCGTTATTTTAAATTTTTTGGTGTTGCTATTGCTCTCTTTATTGATTTCAGCATGACTTTGATTTTAGGATTACATTATTGTATTTGCTTTGCATACTTGTTTTTTATATGCTTTACCTGTGTCGTTTATCTGGTAGATACAACCTCTCTACCTTTCAAAAGGTAGGGGTAAGGCCGTGTACACACCATCCTCCTCAGACCCCACTTGTGGGATTATAACTGGCCCAGTTGAGCTGGGTATGTTTTTATTGGATCTCCAGATGAAGACCAGACAATACTTTTCTTGACAAATTGCTTTACGTGGAAGGCTGCTGATACTGCATTAGTTGCTTACATTTGGTTTTCACTAGACATCTTTTTCATATTATACATAAATATGCAGGCTACACTAGAAACTACTATATAGAATTGGATAATCCGTAGTGAATAAATTTATCTTGGGTCTGTTTTGTTTTCTCACTCCATGTAGCATGGGCACTTTATTAGATACATATTCAAGTATAGTTTAAGGCTCCACCTGCAAGGACTTTTTTAACTTTAACTTCTTCCAATTTTTGCAAAGTGGACTATTTGTTAAATCAAAAGTAGATATATATTAGCAGCTTCAAAAAAAAAAAGTAGATGTATATTAGAATCTAGCTATTAGTAGTCCTTTGTAATTATAATGATGAACAACAATATATTTTCCTAATCATATGTTAGTCGACTTACTAGTTAATTAACTAAATAGTTCTTATTGTATCCTCAGGCTACGTTCCTTTGAGGTCTACTTTGATATATAGGGTGAAATGGTAGGGCAAAGTGACAAGACACTGAAGAAAACAGCTATAAGAAGAAAAGATATGAAAGCAGATGAAGAATTAGTTCTCATAAACCAGTTAAAAAAAAGTCATGAGATTACCATTAAGTAGCTTATCTAGTAAAATTTGAGTCAGGGAGCAGGGAGCTGAACTATACACCACAGATAAAAATCAGTTCATAAAAAATTCAGCCAATTGGTTTATGAGAAAACTAATTCTTAAATAGTATGTAATAAATTTCACTAGTTCAAGAAATCCATTCTCACTTGCTGTCTATTTTTTCAGGTTCCTCTCGCTTCACGAT</genome_strand>
        <mrna_strand>CCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTTCTCACTGAGGAAGAACCCCTATAATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCCTCTCGCTTCACGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E706515" ref_strand="+" ref_description="SGN-E706515 [FA30AG04]">
      <seq>cgatgtctctcctaccaccgccaccgcttcaaaccctaaccctaacctcaaaactgataccaaatccaaacctgaggatgaggttcctgtttcgattccagtgaagatcgagaaggaggaagaggatgttcgagtggagaatgtgaaagagccggagaaattggttgattcatctgctgtcgtggttgaacctaagcttgaggttttggaaaacgatcagaaattggagggtcaggtgaatccctctggtgtggagactagcaacaaagaggatgcaactgataatcagaaaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcgtttgagcagtacatcaccatcttcagattctcaactgaggaagaccccctataatgtggttcctctcgcttcacgatctgttggagttactgttagtccttcacggtttgcacctccgggacagcaagggcaaccttcaagtctccccccagtgtccttatctggaacgaacattgttgcctcctctccttctcctgtagcatcaggcggcacttcagcatttcgagatcggtttgcaagcccatgaaaatgggagttgtgctagttgttactcctcctgtcagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94540" stop="104427"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94840" g_stop="95095" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="256" r_length="256" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95096" i_stop="100536" i_length="5441">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100537" g_stop="100644" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="364" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100781" g_stop="101056" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="640" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103900" g_stop="104127" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="641" r_stop="868" r_length="228" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E706515" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>868</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E706515" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94840" e_stop="95095"/>
          <exon e_start="100537" e_stop="100644"/>
          <exon e_start="100781" e_stop="101056"/>
          <exon e_start="103900" e_stop="104127"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAGGTATTGAATTGCAATTATTGATCTATTTTGTTTGTATGGTGTTATCCATGGATTTTGCTGGCTTTAGTTATGATTCGCTTATGCATCTTTCTGTTTTCTCTTAGTAAGGAAGGGATCCCAGCCAATTCAGGGTAGAAGTTAAGGGTGTGTATACCTTACGAAGCTTTTTACCCTTTTTGCGATGAGGCTGCTCCAAGTCTGGACTCTCCAACCATGACCTACAGCTTTTCCTCATTTTTGTTTATTATGTTTAGGAATTCTTAATATATGTCAATAAAAAAATATGTATCAGATGATTTGTAAGAACTAATACTGTTTATTTCTATGGAAGAGCGTAATGATATATGTGTAGTTGGTTTAAGACTAGCATTTTTTTAGCAGAAGCGTCATGTACTGATTAGAGATGAGGAGGTATATTTGCCTGAGGGTTGGGATACTTACATTAGATCTGTTCGGGGGATACTGCTTTCAGAAATTAAGGATAAATGGAGAGACAGTGAATGCTACATGCTACATTGGATTTATGGAGATAGGGAGAAGAGTCGTTCTTTCCGTATAGGGTGCCCATGAAGGTGTGTTTCCTTGCTTGATTAGGGGCGGGTGAAGTGATATTGATGGCTGAGAACATGAGATAGAAAAGGAGCACCTATGTTGGTGTTACATCTACAGATGTTTGGGTGAATACGTAGACCTGTCTCCTGTTACATTTTCAGGTGGTTGTGCACTCATTGTTGGCAATTCTGAATCGTTTGGTGGATACATGAGTATTTGTCAGAGTTTCTCTATATCGGAAGCAATCTGTAATTCCAGACTTTTCACCTACTCGTTTAACCGGAACCCAACATACTAAATTTAAGAGAATATCAAATATGAAGTCGGTCGCTTTCACAAAACTTTAGACGTTCCCAGTTACTTCTTTACTGACACAAGCCAAAACCAAATTTACAAGACCGACACAAGGAGGAAAACTCTAGGATTTAAGCAAAATAATATACTATATTAGTCTAAATAGAATGATGTCCCATGCGAGGTAAGTGCGGAGCTTGTTAGCTCTGTGACTCTGTATGAGTCAAAGTGTCACCCTTAAATGAATTATCTTTGGGGGGGGGGGAGGAGTTGGATTCAGTTGCACTAATTGCGTGAGTAATAACATCAACCATACATTTTATATGGAGCAGGTATACATAAGGAATCATGCAATTTATAAGATCCTCAACTATGTCCTACTTAAATCAATATAGCCTAAGTTGCTCGGGTGTGGTTTCCGATAATGCGGACCTAGAGCTCAAATCCTATATGATCTAAATTTTTAGATTTGGGTATATGGATCCATGTATGGATATGGGAGCGGGGGTTCGGCTAAAAATAATTCAAATAGCTAAAAATAGAGTTATAAAGCCTAAGTTATGAGATATTATATGGACGTCTTGAGATGAAAATGTTGATCAAGAGGAGAAAGAGATAAAAGGAAAAAGAGTGACAATAGAAATTAATATATCCAAGGTATTTCATTTCTTCAATTTCACCTTAATTTTTGTTTTGCGCATATAAATCATTGAATCTGTCCAAATTTCTCCCTCAAATTTGGTTTAAGTATCCCAAATTGGTTGACCATATCGTTTACGGATGCCACACCATCACTCACACCCGTTTCGTGTCGACATGGGTGCGAGAACAAAGGCGAAGAGTCCGTGCAACTTAGGATATAACCATTGTTGTGAAAAGCGCAGAAAAAGCGCGCTTCAAAGCGACACGACCCTTGTGCGCTTTTTTATCTTGAGGCGAGGCGATCTGAAGAAAACTCTCGCTTCAGATGAAGAAGCGACCCTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAAAAGCGACAATTAGTTTTTTTTTAATAAAAAAATTAGGTTTTTTTTTATAAAAAAATCTGAAATATAACCTTCTCTCTCCTCACGACTCTTTTCCTTCTTTCTCTTCTCGCAACTCTTCTTTCACAACACTTCTTTCCCTTCTTTCTCTCCTCGCAGCTCTTCTTTCACAATACTTCTTTCCCTTCTTTCTCTCCTGACGATCTCGACTGAGTCTGCCTCTTTCTTCAACCTCGACTGTAGGTAACTTTTTGTTCATCTCTTTTTTAGCTAATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATCAATCTTTGCCTGTGCTTCATCTCTTCATCTCTCTGAGTTTCAACTACTCTAGTTTTTTCTTCTTCTTCTCTTCTTTTCTTCATCTCTGCTGCTTGCTCTGTTTCTAATTACTGACTGCTGCCTCCTCTGTTTTTTTTTTCTTCAATTCTTTTGCTTTTTTTTATTTTTTTATTTTGTGATCAGTCTAGCAGCCTTGTTGAAGAATAGGAGTTTGAATCTTTGTGACTTAATTATATTTTTGATTTTTTGCTTTATATGTTATGACTTATGAGTATTTTTGCCTATGTAATTTCTTTCAATCTAAGACTATATTACCTCTATTTAGTTATTTAATATTTTTTATTTTTATACTAAATGTCGCTTTTTTTTTCTAAAAAAAAGCGCGCTTCGCTTCTGTGAAGCAAGCCTTCGTAGCTTTTTTCCGCTTCTCGCTTCCCAAAACACGGATATAACAATTCGTGTGTGAAATAAATGATCAAAATGGATGAAAATATACATTTTAGATCCATTTATCCTTTTCTACTTAATATCCTTATATAGTGGGAGATACATTAACCAAAATCGATGTAAATTTGGACACCACAAGTCTATCATGGCTTTCTGACTATCCCATCAGCTAGGTTCCCTTCTAGAGGGCTCAAGTGTGATATTCATATTACTGGTTCTTTCCTGCTAGTATAGGAAAATATTATACAAGGTGCGACCATGTCTAGTGACCTCAACGTTAGATGATAGTGATCTAGCAAAGCTTACTCCTGAAGTATCTTCCTTACAACAACAACATACCCAGTATGATCCCACATAGTTAGGGTCTAGGGAAGGTAGAGTTTACACAGAACTTAACCCTACCTCAGAGGTATTGAAGTATCTTCCATATAAGACAAAATGTTGTCATATTTTTTTGTGTTAAGAATTTATTCCAATAGTATATATAGCAACTAGGTTTAAGGATAATCAATATGTCAAAGTCATTATAAAGATGATTTTGTACATTTCCAATTGTGGACCATACTTTCACTTGTTCGTGTGCAGGTAATCGATTTGTTTTTTATAAATCGTTTCAATGCAAGAATACAAACTCAAAATTATGCTATAATTGAAATTCAACTATGAAAGAATTATAACTCATAGTACTATTGCTGAAAACTCCAATTTGATAATTGCGTCGTCAAAGTATCAAATATCTTATAATAGGTCATAACTTTGTATCTTAATCATTCATAGAACTTGTGAAATTCCATGTTTTTAGCAATAAGATCTCAATTTCCCAATTCGACTCTAACATTAACTCTTAACATTAAGTCGATGTGGGTTTATTAGTTTGGCTGTATTCTCCATTCTAAAAAAAGTTTATCAGGAATCCTAAATAGCAAATGATGAAACTGCTAGTTCAAGAATAAAGACAAAACTTGTGTTTATATCATGTTACTCCGAGCCAACTTTAAATAAAGTGTTGTCTTAGCAGTTAGCACCGTTTCGGGAAAAATATATTTTCGATCATCAAGTTTGAAACCTAAATCAACTTCTTCCCCAAATTGAAAGCTTCTTTAAAATTCCAGATTATTGCCTCCTCAAATCTCCATTTATGAACAAGGTATTTTAACTTTTGATATAATGTTGAATCTAGTGCTGAATACCTCATTAATTTAAGGTCGCTTCACTCCTATTTCCTACTGTTTTATACCCTAAAGAAGAATTTAGTTAGTTGAATATGGTTTTAAAGAGTGACCTGAATTGTGATTACAGCAAAAAAATTTGCTTCTTCTCCTTTAGCTTGTGCTTAGGTTTTAAAGGTAGTAACTTCTATTTATGATCTTGAAGTTCTTCTTATTTTTTTTTTTGCTTTCTTGCTTCCTTTCCTTTTTTTTTCCTTCTTTCCTGTAGCTCTTGTTTCCCCCTTGCGAAATGCTGTTGGAAAGCTTCCTCTTAAAACCAGTGCTGCTGGCTTTTGTCTCTATTGCCAACCGCTCCTCTTCTTTTTTTCTCCTTTTTTAATAGCCGACGGGTCAAGGATAATGGGCTGGCTATTTTAGTTACTCGCTTATTTTAAATGTGCCAAGTCCAATTCTTTAAGTCATTACACACGTTGTGGGTCAGTGGTTATTTGGTCTCTTTTTTATGGTCCTATCCATTCATCTCGACATGAGCTAGTTTTTGGGGTTGAGTTATGCCGTGGTCCAATTCTTTGTCATGGTACCATAGTCAAGTCCATCCCAATTCATGTTTACCTGATGTTGGGCCTCCCATCTTATATTTTCTTCGCTCCAAAGGTTCAACCTTGAGCGCGTGCGACCGGGGTGGGTGGGTAGGGGGTTGGGGTTAAGGTTACCTAGTCTTTATATGATGTGGGCAATTCTTCCCTCATGAGCTAGCTTTAGGATTGAGTTAGACCCAAGGTTGTTTTTTATTTCAGAAGGTGAACAAGAAGATCGAAGGCGTCGGATGATGCTCCATTAGCCTTTATGTGGGTTATATTGAAAGAGAAAAAATAGGATAACATTTGAAGGGGTTGACAATGACTCTGTTAAATTAAAAAAGTAGCCTCTTGTGTATGATATCTCTTTGGTGTACCTATGAGGTTCCTATTTGTGTAGAAGACCGGATATCTTCTGTTGAGAACCATACATTTGTTTAGGTTTCTATACTTTTTGATATTTGACTTGTATTACCGATTTCCCATCATTGATAGTATTGCTTATTAAATTAATGAAAAAGGAGAAATGGTAAATGAAATTGCCTTATTGAATATATGACAGCTGTTTGAATAGTGCTAATTATGTCGTACACATTTTGATTGAACAGCCTCATTAGCTGCAAAGGCACAATATCTTATGCTAATGCCTTCCTTTTCCTCTTCATTCTTATTTGCTGTCCGTTGGTACCTCTGTTCTTCTCTTACCTCTTATTTGTGCATTCATTCATCTGTATATTATATGTTATTTGGCAGTTGATCCTCTTCTAAAATTTACCAAAAATTGATTAGCCTAGTTCTCTTGACATGGCTCATTGTAGATTATAGTGAATCCTCATATTTATGTCTGAATATATTTTCCCAACTGCCAATGTGGTTAGCAGAGAGCGATAGGATGGGGTTGGAAGGCATCTGATATGCAAAATATATGATTATATAAGTATTATGTTTGAGGTCAGGGTCAACTATACATTTGGTGCATAATTTAGAACAAGGACCAGCTCAAAATTGTTTTCTTCTTGTTTCCATTTAACTTCTTAATTTTTCTTATAACTCTCCTTGGCAGACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTGGTAAGTGCCCTATCTATGCGTGCATTGTTACCTTTGGCTTTCATTTGTGGCGCTACACCACCAGGAGTGGAAAAAGAGGGCTTTAATTTTTGTTTCTAATATAATTAATCTAGCAAAGATTTAAAAAGTTTTAAGTAAAGCAACAACATTCAATATGTGCAAGACTGCAAGTTAGTTCATCATATTATTGCTGGTTCACTCCCTTGAACCAAGTCTTCTATTTATCTTCTTCCTCAATGGAGCAGATCTTAATTTTTCTTTCATAGAACCATGTCCAAGGCATCTCGAAATGTGTGCTCTTGGTAACATTTGCTGAAAATTAAGGACCCCATATTGAACTTCTATTGGACATGAGATTTTGTTACAATTGTGTCTCTGTAACTAGTTTTGAGCTGTTCCAATCATTTTCTGCCACTTGTTGGACTAATTGGACCTTGCAATAAATTATGTTGCTACTTTGCACATGCCATAATAAGGGTTAGTGCTTTGACTAAGGGAAGATGATATATGTATATATATATATATGTATATATATATATATTATCTTGTTGTTGCATCAATGGAGAAGTTTATGTGCTATTTTACCTTGTTAATACTAGTTGTAAGAGCAAAAATTACTTTGTGGCCATTTTCTTCAGTGCAAACTGGGAATCAACATGTGGGATGAGGGATTATTGGAGTTATATATCAGCCTTCAACCACTTCCCCTTGATGTGAAATTTTCAGTCCCCTTTCTTTGTGAATAATGGAGTTCCAGAGAATGTACGATGTTCGGAGACTTGAACCAAGAGGTGCATCCTTAGATTACGTTAGGGCAATTAAATACATGTACTATGGAGCAAGGAAACTCAGATCACTTCTCGTTGTGATGGGGTTGCACCAGGGATCGACACATAGCCCATTTCTAGTTACTAACACGACTTATCCTAGGAAAAGTCCATGATATATGCTCTTTGCAGATGACAATGTGGTAATGAGACCAGGACAGAGTTAACAATAGGTGCCTTAACAATATATTGGAAATTTGAGGACAGACGTTGGAGTATAAAGAGTCTGGGTTGAGTAGGACTTAGACAAAATACTTGAAGTTCAAGTTCAATGACGTAAAACACATGGTAGATGTGGAAGTAAGGATTGAAACAAGCAGGGATCAATGATTCAGGAAAATAAGGAGATAGACGAAGATGTTACACATTGTATTGGAGCAGGTGGATGACGTTCACTGTCTTTTATGATAAGATTGTACCACCAAAGCCTTAAGGTAGGTATTACAAAGTGGTGGTCAGACTAGCTATGGACAGAGTGTTGACTAGACAAGAACTCGCATGTATAGAAGATGAGAGTAGTAGAAATGAGAATGTTGAGTTGGATGTTTGGGCATACTAAGATTGAGATTAGGAATGAAGCTATACGCGACATTGTGGGATAGGGCGCCTTGGTGAACAAGATGAGGCATGTGAAGCTGAGATGGTTCGAACATGTGAAGGAAACATGCATGAATACCCCGATTAGGAGCGAGAGGTTGGCTATAGAGGATGTAACATGATGTAGAGGTAGACCGAGAAGTCTCAAAAGAAATGATTAGATAGGACATGACTCATGCAGCTTACCTTTATGAGGACATGACCTTGGCCCTAGATAGGAAGATATGGCGGTCAAAAATTAGGGTAGAAGGTCAGTAGGTCGAACATTGTCTTGTTCTCTCTTACTGTCTTATTCGATTTTAGTATTACATGATTTTTCATTTGCTAACAGCTACCGTTATTTTAAATTTTTTGGTGTTGCTATTGCTCTCTTTATTGATTTCAGCATGACTTTGATTTTAGGATTACATTATTGTATTTGCTTTGCATACTTGTTTTTTATATGCTTTACCTGTGTCGTTTATCTGGTAGATACAACCTCTCTACCTTTCAAAAGGTAGGGGTAAGGCCGTGTACACACCATCCTCCTCAGACCCCACTTGTGGGATTATAACTGGCCCAGTTGAGCTGGGTATGTTTTTATTGGATCTCCAGATGAAGACCAGACAATACTTTTCTTGACAAATTGCTTTACGTGGAAGGCTGCTGATACTGCATTAGTTGCTTACATTTGGTTTTCACTAGACATCTTTTTCATATTATACATAAATATGCAGGCTACACTAGAAACTACTATATAGAATTGGATAATCCGTAGTGAATAAATTTATCTTGGGTCTGTTTTGTTTTCTCACTCCATGTAGCATGGGCACTTTATTAGATACATATTCAAGTATAGTTTAAGGCTCCACCTGCAAGGACTTTTTTAACTTTAACTTCTTCCAATTTTTGCAAAGTGGACTATTTGTTAAATCAAAAGTAGATATATATTAGCAGCTTCAAAAAAAAAAAGTAGATGTATATTAGAATCTAGCTATTAGTAGTCCTTTGTAATTATAATGATGAACAACAATATATTTTCCTAATCATATGTTAGTCGACTTACTAGTTAATTAACTAAATAGTTCTTATTGTATCCTCAGGCTACGTTCCTTTGAGGTCTACTTTGATATATAGGGTGAAATGGTAGGGCAAAGTGACAAGACACTGAAGAAAACAGCTATAAGAAGAAAAGATATGAAAGCAGATGAAGAATTAGTTCTCATAAACCAGTTAAAAAAAAGTCATGAGATTACCATTAAGTAGCTTATCTAGTAAAATTTGAGTCAGGGAGCAGGGAGCTGAACTATACACCACAGATAAAAATCAGTTCATAAAAAATTCAGCCAATTGGTTTATGAGAAAACTAATTCTTAAATAGTATGTAATAAATTTCACTAGTTCAAGAAATCCATTCTCACTTGCTGTCTATTTTTTCAGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCT</genome_strand>
        <mrna_strand>CGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E730255" ref_strand="+" ref_description="SGN-E730255 [LA23CC08]">
      <seq>ccaccgccaccgcttcaaaccctaaccctaacctcttaactgataccaaatccaaacctgaggatgaggttcctgtttcgattccagtgaagatcgagaaggaggaagaggatgttcgagtggagaatgtgaaagagccggagaaattggttgattcatctgctgtcgtggttgaacctaagcttgaggttttggaaaacgatcataaattggagggtcaggtgaatccctctggtgtggagactagcaacaaagaggatgcaactgataatcagaaaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcgtttgagcagtacatcaccatcttcagcatttcgagatcggtttgcaagtccatgaaaatgggagttgtgctagttgttactcctcctgtcaactggctttctgttccctcaacctcattctaagtttcaactggctaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94554" stop="104472"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94854" g_stop="95095" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="242" r_length="242" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95096" i_stop="100536" i_length="5441">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100537" g_stop="100644" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="350" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100781" g_stop="101024" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="594" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101025" i_stop="104059" i_length="3035">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104060" g_stop="104172" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="595" r_stop="707" r_length="113" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E730255" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>707</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E730255" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94854" e_stop="95095"/>
          <exon e_start="100537" e_stop="100644"/>
          <exon e_start="100781" e_stop="101024"/>
          <exon e_start="104060" e_stop="104172"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAGGTATTGAATTGCAATTATTGATCTATTTTGTTTGTATGGTGTTATCCATGGATTTTGCTGGCTTTAGTTATGATTCGCTTATGCATCTTTCTGTTTTCTCTTAGTAAGGAAGGGATCCCAGCCAATTCAGGGTAGAAGTTAAGGGTGTGTATACCTTACGAAGCTTTTTACCCTTTTTGCGATGAGGCTGCTCCAAGTCTGGACTCTCCAACCATGACCTACAGCTTTTCCTCATTTTTGTTTATTATGTTTAGGAATTCTTAATATATGTCAATAAAAAAATATGTATCAGATGATTTGTAAGAACTAATACTGTTTATTTCTATGGAAGAGCGTAATGATATATGTGTAGTTGGTTTAAGACTAGCATTTTTTTAGCAGAAGCGTCATGTACTGATTAGAGATGAGGAGGTATATTTGCCTGAGGGTTGGGATACTTACATTAGATCTGTTCGGGGGATACTGCTTTCAGAAATTAAGGATAAATGGAGAGACAGTGAATGCTACATGCTACATTGGATTTATGGAGATAGGGAGAAGAGTCGTTCTTTCCGTATAGGGTGCCCATGAAGGTGTGTTTCCTTGCTTGATTAGGGGCGGGTGAAGTGATATTGATGGCTGAGAACATGAGATAGAAAAGGAGCACCTATGTTGGTGTTACATCTACAGATGTTTGGGTGAATACGTAGACCTGTCTCCTGTTACATTTTCAGGTGGTTGTGCACTCATTGTTGGCAATTCTGAATCGTTTGGTGGATACATGAGTATTTGTCAGAGTTTCTCTATATCGGAAGCAATCTGTAATTCCAGACTTTTCACCTACTCGTTTAACCGGAACCCAACATACTAAATTTAAGAGAATATCAAATATGAAGTCGGTCGCTTTCACAAAACTTTAGACGTTCCCAGTTACTTCTTTACTGACACAAGCCAAAACCAAATTTACAAGACCGACACAAGGAGGAAAACTCTAGGATTTAAGCAAAATAATATACTATATTAGTCTAAATAGAATGATGTCCCATGCGAGGTAAGTGCGGAGCTTGTTAGCTCTGTGACTCTGTATGAGTCAAAGTGTCACCCTTAAATGAATTATCTTTGGGGGGGGGGGAGGAGTTGGATTCAGTTGCACTAATTGCGTGAGTAATAACATCAACCATACATTTTATATGGAGCAGGTATACATAAGGAATCATGCAATTTATAAGATCCTCAACTATGTCCTACTTAAATCAATATAGCCTAAGTTGCTCGGGTGTGGTTTCCGATAATGCGGACCTAGAGCTCAAATCCTATATGATCTAAATTTTTAGATTTGGGTATATGGATCCATGTATGGATATGGGAGCGGGGGTTCGGCTAAAAATAATTCAAATAGCTAAAAATAGAGTTATAAAGCCTAAGTTATGAGATATTATATGGACGTCTTGAGATGAAAATGTTGATCAAGAGGAGAAAGAGATAAAAGGAAAAAGAGTGACAATAGAAATTAATATATCCAAGGTATTTCATTTCTTCAATTTCACCTTAATTTTTGTTTTGCGCATATAAATCATTGAATCTGTCCAAATTTCTCCCTCAAATTTGGTTTAAGTATCCCAAATTGGTTGACCATATCGTTTACGGATGCCACACCATCACTCACACCCGTTTCGTGTCGACATGGGTGCGAGAACAAAGGCGAAGAGTCCGTGCAACTTAGGATATAACCATTGTTGTGAAAAGCGCAGAAAAAGCGCGCTTCAAAGCGACACGACCCTTGTGCGCTTTTTTATCTTGAGGCGAGGCGATCTGAAGAAAACTCTCGCTTCAGATGAAGAAGCGACCCTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAAAAGCGACAATTAGTTTTTTTTTAATAAAAAAATTAGGTTTTTTTTTATAAAAAAATCTGAAATATAACCTTCTCTCTCCTCACGACTCTTTTCCTTCTTTCTCTTCTCGCAACTCTTCTTTCACAACACTTCTTTCCCTTCTTTCTCTCCTCGCAGCTCTTCTTTCACAATACTTCTTTCCCTTCTTTCTCTCCTGACGATCTCGACTGAGTCTGCCTCTTTCTTCAACCTCGACTGTAGGTAACTTTTTGTTCATCTCTTTTTTAGCTAATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATCAATCTTTGCCTGTGCTTCATCTCTTCATCTCTCTGAGTTTCAACTACTCTAGTTTTTTCTTCTTCTTCTCTTCTTTTCTTCATCTCTGCTGCTTGCTCTGTTTCTAATTACTGACTGCTGCCTCCTCTGTTTTTTTTTTCTTCAATTCTTTTGCTTTTTTTTATTTTTTTATTTTGTGATCAGTCTAGCAGCCTTGTTGAAGAATAGGAGTTTGAATCTTTGTGACTTAATTATATTTTTGATTTTTTGCTTTATATGTTATGACTTATGAGTATTTTTGCCTATGTAATTTCTTTCAATCTAAGACTATATTACCTCTATTTAGTTATTTAATATTTTTTATTTTTATACTAAATGTCGCTTTTTTTTTCTAAAAAAAAGCGCGCTTCGCTTCTGTGAAGCAAGCCTTCGTAGCTTTTTTCCGCTTCTCGCTTCCCAAAACACGGATATAACAATTCGTGTGTGAAATAAATGATCAAAATGGATGAAAATATACATTTTAGATCCATTTATCCTTTTCTACTTAATATCCTTATATAGTGGGAGATACATTAACCAAAATCGATGTAAATTTGGACACCACAAGTCTATCATGGCTTTCTGACTATCCCATCAGCTAGGTTCCCTTCTAGAGGGCTCAAGTGTGATATTCATATTACTGGTTCTTTCCTGCTAGTATAGGAAAATATTATACAAGGTGCGACCATGTCTAGTGACCTCAACGTTAGATGATAGTGATCTAGCAAAGCTTACTCCTGAAGTATCTTCCTTACAACAACAACATACCCAGTATGATCCCACATAGTTAGGGTCTAGGGAAGGTAGAGTTTACACAGAACTTAACCCTACCTCAGAGGTATTGAAGTATCTTCCATATAAGACAAAATGTTGTCATATTTTTTTGTGTTAAGAATTTATTCCAATAGTATATATAGCAACTAGGTTTAAGGATAATCAATATGTCAAAGTCATTATAAAGATGATTTTGTACATTTCCAATTGTGGACCATACTTTCACTTGTTCGTGTGCAGGTAATCGATTTGTTTTTTATAAATCGTTTCAATGCAAGAATACAAACTCAAAATTATGCTATAATTGAAATTCAACTATGAAAGAATTATAACTCATAGTACTATTGCTGAAAACTCCAATTTGATAATTGCGTCGTCAAAGTATCAAATATCTTATAATAGGTCATAACTTTGTATCTTAATCATTCATAGAACTTGTGAAATTCCATGTTTTTAGCAATAAGATCTCAATTTCCCAATTCGACTCTAACATTAACTCTTAACATTAAGTCGATGTGGGTTTATTAGTTTGGCTGTATTCTCCATTCTAAAAAAAGTTTATCAGGAATCCTAAATAGCAAATGATGAAACTGCTAGTTCAAGAATAAAGACAAAACTTGTGTTTATATCATGTTACTCCGAGCCAACTTTAAATAAAGTGTTGTCTTAGCAGTTAGCACCGTTTCGGGAAAAATATATTTTCGATCATCAAGTTTGAAACCTAAATCAACTTCTTCCCCAAATTGAAAGCTTCTTTAAAATTCCAGATTATTGCCTCCTCAAATCTCCATTTATGAACAAGGTATTTTAACTTTTGATATAATGTTGAATCTAGTGCTGAATACCTCATTAATTTAAGGTCGCTTCACTCCTATTTCCTACTGTTTTATACCCTAAAGAAGAATTTAGTTAGTTGAATATGGTTTTAAAGAGTGACCTGAATTGTGATTACAGCAAAAAAATTTGCTTCTTCTCCTTTAGCTTGTGCTTAGGTTTTAAAGGTAGTAACTTCTATTTATGATCTTGAAGTTCTTCTTATTTTTTTTTTTGCTTTCTTGCTTCCTTTCCTTTTTTTTTCCTTCTTTCCTGTAGCTCTTGTTTCCCCCTTGCGAAATGCTGTTGGAAAGCTTCCTCTTAAAACCAGTGCTGCTGGCTTTTGTCTCTATTGCCAACCGCTCCTCTTCTTTTTTTCTCCTTTTTTAATAGCCGACGGGTCAAGGATAATGGGCTGGCTATTTTAGTTACTCGCTTATTTTAAATGTGCCAAGTCCAATTCTTTAAGTCATTACACACGTTGTGGGTCAGTGGTTATTTGGTCTCTTTTTTATGGTCCTATCCATTCATCTCGACATGAGCTAGTTTTTGGGGTTGAGTTATGCCGTGGTCCAATTCTTTGTCATGGTACCATAGTCAAGTCCATCCCAATTCATGTTTACCTGATGTTGGGCCTCCCATCTTATATTTTCTTCGCTCCAAAGGTTCAACCTTGAGCGCGTGCGACCGGGGTGGGTGGGTAGGGGGTTGGGGTTAAGGTTACCTAGTCTTTATATGATGTGGGCAATTCTTCCCTCATGAGCTAGCTTTAGGATTGAGTTAGACCCAAGGTTGTTTTTTATTTCAGAAGGTGAACAAGAAGATCGAAGGCGTCGGATGATGCTCCATTAGCCTTTATGTGGGTTATATTGAAAGAGAAAAAATAGGATAACATTTGAAGGGGTTGACAATGACTCTGTTAAATTAAAAAAGTAGCCTCTTGTGTATGATATCTCTTTGGTGTACCTATGAGGTTCCTATTTGTGTAGAAGACCGGATATCTTCTGTTGAGAACCATACATTTGTTTAGGTTTCTATACTTTTTGATATTTGACTTGTATTACCGATTTCCCATCATTGATAGTATTGCTTATTAAATTAATGAAAAAGGAGAAATGGTAAATGAAATTGCCTTATTGAATATATGACAGCTGTTTGAATAGTGCTAATTATGTCGTACACATTTTGATTGAACAGCCTCATTAGCTGCAAAGGCACAATATCTTATGCTAATGCCTTCCTTTTCCTCTTCATTCTTATTTGCTGTCCGTTGGTACCTCTGTTCTTCTCTTACCTCTTATTTGTGCATTCATTCATCTGTATATTATATGTTATTTGGCAGTTGATCCTCTTCTAAAATTTACCAAAAATTGATTAGCCTAGTTCTCTTGACATGGCTCATTGTAGATTATAGTGAATCCTCATATTTATGTCTGAATATATTTTCCCAACTGCCAATGTGGTTAGCAGAGAGCGATAGGATGGGGTTGGAAGGCATCTGATATGCAAAATATATGATTATATAAGTATTATGTTTGAGGTCAGGGTCAACTATACATTTGGTGCATAATTTAGAACAAGGACCAGCTCAAAATTGTTTTCTTCTTGTTTCCATTTAACTTCTTAATTTTTCTTATAACTCTCCTTGGCAGACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTGGTAAGTGCCCTATCTATGCGTGCATTGTTACCTTTGGCTTTCATTTGTGGCGCTACACCACCAGGAGTGGAAAAAGAGGGCTTTAATTTTTGTTTCTAATATAATTAATCTAGCAAAGATTTAAAAAGTTTTAAGTAAAGCAACAACATTCAATATGTGCAAGACTGCAAGTTAGTTCATCATATTATTGCTGGTTCACTCCCTTGAACCAAGTCTTCTATTTATCTTCTTCCTCAATGGAGCAGATCTTAATTTTTCTTTCATAGAACCATGTCCAAGGCATCTCGAAATGTGTGCTCTTGGTAACATTTGCTGAAAATTAAGGACCCCATATTGAACTTCTATTGGACATGAGATTTTGTTACAATTGTGTCTCTGTAACTAGTTTTGAGCTGTTCCAATCATTTTCTGCCACTTGTTGGACTAATTGGACCTTGCAATAAATTATGTTGCTACTTTGCACATGCCATAATAAGGGTTAGTGCTTTGACTAAGGGAAGATGATATATGTATATATATATATATGTATATATATATATATTATCTTGTTGTTGCATCAATGGAGAAGTTTATGTGCTATTTTACCTTGTTAATACTAGTTGTAAGAGCAAAAATTACTTTGTGGCCATTTTCTTCAGTGCAAACTGGGAATCAACATGTGGGATGAGGGATTATTGGAGTTATATATCAGCCTTCAACCACTTCCCCTTGATGTGAAATTTTCAGTCCCCTTTCTTTGTGAATAATGGAGTTCCAGAGAATGTACGATGTTCGGAGACTTGAACCAAGAGGTGCATCCTTAGATTACGTTAGGGCAATTAAATACATGTACTATGGAGCAAGGAAACTCAGATCACTTCTCGTTGTGATGGGGTTGCACCAGGGATCGACACATAGCCCATTTCTAGTTACTAACACGACTTATCCTAGGAAAAGTCCATGATATATGCTCTTTGCAGATGACAATGTGGTAATGAGACCAGGACAGAGTTAACAATAGGTGCCTTAACAATATATTGGAAATTTGAGGACAGACGTTGGAGTATAAAGAGTCTGGGTTGAGTAGGACTTAGACAAAATACTTGAAGTTCAAGTTCAATGACGTAAAACACATGGTAGATGTGGAAGTAAGGATTGAAACAAGCAGGGATCAATGATTCAGGAAAATAAGGAGATAGACGAAGATGTTACACATTGTATTGGAGCAGGTGGATGACGTTCACTGTCTTTTATGATAAGATTGTACCACCAAAGCCTTAAGGTAGGTATTACAAAGTGGTGGTCAGACTAGCTATGGACAGAGTGTTGACTAGACAAGAACTCGCATGTATAGAAGATGAGAGTAGTAGAAATGAGAATGTTGAGTTGGATGTTTGGGCATACTAAGATTGAGATTAGGAATGAAGCTATACGCGACATTGTGGGATAGGGCGCCTTGGTGAACAAGATGAGGCATGTGAAGCTGAGATGGTTCGAACATGTGAAGGAAACATGCATGAATACCCCGATTAGGAGCGAGAGGTTGGCTATAGAGGATGTAACATGATGTAGAGGTAGACCGAGAAGTCTCAAAAGAAATGATTAGATAGGACATGACTCATGCAGCTTACCTTTATGAGGACATGACCTTGGCCCTAGATAGGAAGATATGGCGGTCAAAAATTAGGGTAGAAGGTCAGTAGGTCGAACATTGTCTTGTTCTCTCTTACTGTCTTATTCGATTTTAGTATTACATGATTTTTCATTTGCTAACAGCTACCGTTATTTTAAATTTTTTGGTGTTGCTATTGCTCTCTTTATTGATTTCAGCATGACTTTGATTTTAGGATTACATTATTGTATTTGCTTTGCATACTTGTTTTTTATATGCTTTACCTGTGTCGTTTATCTGGTAGATACAACCTCTCTACCTTTCAAAAGGTAGGGGTAAGGCCGTGTACACACCATCCTCCTCAGACCCCACTTGTGGGATTATAACTGGCCCAGTTGAGCTGGGTATGTTTTTATTGGATCTCCAGATGAAGACCAGACAATACTTTTCTTGACAAATTGCTTTACGTGGAAGGCTGCTGATACTGCATTAGTTGCTTACATTTGGTTTTCACTAGACATCTTTTTCATATTATACATAAATATGCAGGCTACACTAGAAACTACTATATAGAATTGGATAATCCGTAGTGAATAAATTTATCTTGGGTCTGTTTTGTTTTCTCACTCCATGTAGCATGGGCACTTTATTAGATACATATTCAAGTATAGTTTAAGGCTCCACCTGCAAGGACTTTTTTAACTTTAACTTCTTCCAATTTTTGCAAAGTGGACTATTTGTTAAATCAAAAGTAGATATATATTAGCAGCTTCAAAAAAAAAAAGTAGATGTATATTAGAATCTAGCTATTAGTAGTCCTTTGTAATTATAATGATGAACAACAATATATTTTCCTAATCATATGTTAGTCGACTTACTAGTTAATTAACTAAATAGTTCTTATTGTATCCTCAGGCTACGTTCCTTTGAGGTCTACTTTGATATATAGGGTGAAATGGTAGGGCAAAGTGACAAGACACTGAAGAAAACAGCTATAAGAAGAAAAGATATGAAAGCAGATGAAGAATTAGTTCTCATAAACCAGTTAAAAAAAAGTCATGAGATTACCATTAAGTAGCTTATCTAGTAAAATTTGAGTCAGGGAGCAGGGAGCTGAACTATACACCACAGATAAAAATCAGTTCATAAAAAATTCAGCCAATTGGTTTATGAGAAAACTAATTCTTAAATAGTATGTAATAAATTTCACTAGTTCAAGAAATCCATTCTCACTTGCTGTCTATTTTTTCAGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAAT</genome_strand>
        <mrna_strand>CCACCGCCACCGCTTCAAACCCTAACCCTAACCTCTTAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCATAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTCGAGATCGGTTTGCAAGTCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAACTGGCTTTCTGTTCCCTCAACCTCATTCTAAGTTTCAACTGGCTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E329231" ref_strand="+" ref_description="SGN-E329231 [cTOD-2-C16]">
      <seq>taaccctaacctcaaaactgataccaaatccaaacctgaggatgaggttcctgtttcgattccagtgaagatcgagaaggaggaagaggatgttcgagtggagaatgtgaaagagccggagaaattggttgattcatctgctgtcgtggttgaacctaagcttgaggttttggaaaacgatcagaaattggagggtcaggtgaatccctctggtgtggagactagcaacaaagaggatgcaactgataatcagaaaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94576" stop="101218"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94876" g_stop="95095" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="220" r_length="220" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95096" i_stop="100536" i_length="5441">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100537" g_stop="100644" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="328" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100781" g_stop="100918" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="466" r_length="138" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E329231" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E329231" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94876" e_stop="95095"/>
          <exon e_start="100537" e_stop="100644"/>
          <exon e_start="100781" e_stop="100918"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAGGTATTGAATTGCAATTATTGATCTATTTTGTTTGTATGGTGTTATCCATGGATTTTGCTGGCTTTAGTTATGATTCGCTTATGCATCTTTCTGTTTTCTCTTAGTAAGGAAGGGATCCCAGCCAATTCAGGGTAGAAGTTAAGGGTGTGTATACCTTACGAAGCTTTTTACCCTTTTTGCGATGAGGCTGCTCCAAGTCTGGACTCTCCAACCATGACCTACAGCTTTTCCTCATTTTTGTTTATTATGTTTAGGAATTCTTAATATATGTCAATAAAAAAATATGTATCAGATGATTTGTAAGAACTAATACTGTTTATTTCTATGGAAGAGCGTAATGATATATGTGTAGTTGGTTTAAGACTAGCATTTTTTTAGCAGAAGCGTCATGTACTGATTAGAGATGAGGAGGTATATTTGCCTGAGGGTTGGGATACTTACATTAGATCTGTTCGGGGGATACTGCTTTCAGAAATTAAGGATAAATGGAGAGACAGTGAATGCTACATGCTACATTGGATTTATGGAGATAGGGAGAAGAGTCGTTCTTTCCGTATAGGGTGCCCATGAAGGTGTGTTTCCTTGCTTGATTAGGGGCGGGTGAAGTGATATTGATGGCTGAGAACATGAGATAGAAAAGGAGCACCTATGTTGGTGTTACATCTACAGATGTTTGGGTGAATACGTAGACCTGTCTCCTGTTACATTTTCAGGTGGTTGTGCACTCATTGTTGGCAATTCTGAATCGTTTGGTGGATACATGAGTATTTGTCAGAGTTTCTCTATATCGGAAGCAATCTGTAATTCCAGACTTTTCACCTACTCGTTTAACCGGAACCCAACATACTAAATTTAAGAGAATATCAAATATGAAGTCGGTCGCTTTCACAAAACTTTAGACGTTCCCAGTTACTTCTTTACTGACACAAGCCAAAACCAAATTTACAAGACCGACACAAGGAGGAAAACTCTAGGATTTAAGCAAAATAATATACTATATTAGTCTAAATAGAATGATGTCCCATGCGAGGTAAGTGCGGAGCTTGTTAGCTCTGTGACTCTGTATGAGTCAAAGTGTCACCCTTAAATGAATTATCTTTGGGGGGGGGGGAGGAGTTGGATTCAGTTGCACTAATTGCGTGAGTAATAACATCAACCATACATTTTATATGGAGCAGGTATACATAAGGAATCATGCAATTTATAAGATCCTCAACTATGTCCTACTTAAATCAATATAGCCTAAGTTGCTCGGGTGTGGTTTCCGATAATGCGGACCTAGAGCTCAAATCCTATATGATCTAAATTTTTAGATTTGGGTATATGGATCCATGTATGGATATGGGAGCGGGGGTTCGGCTAAAAATAATTCAAATAGCTAAAAATAGAGTTATAAAGCCTAAGTTATGAGATATTATATGGACGTCTTGAGATGAAAATGTTGATCAAGAGGAGAAAGAGATAAAAGGAAAAAGAGTGACAATAGAAATTAATATATCCAAGGTATTTCATTTCTTCAATTTCACCTTAATTTTTGTTTTGCGCATATAAATCATTGAATCTGTCCAAATTTCTCCCTCAAATTTGGTTTAAGTATCCCAAATTGGTTGACCATATCGTTTACGGATGCCACACCATCACTCACACCCGTTTCGTGTCGACATGGGTGCGAGAACAAAGGCGAAGAGTCCGTGCAACTTAGGATATAACCATTGTTGTGAAAAGCGCAGAAAAAGCGCGCTTCAAAGCGACACGACCCTTGTGCGCTTTTTTATCTTGAGGCGAGGCGATCTGAAGAAAACTCTCGCTTCAGATGAAGAAGCGACCCTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAAAAGCGACAATTAGTTTTTTTTTAATAAAAAAATTAGGTTTTTTTTTATAAAAAAATCTGAAATATAACCTTCTCTCTCCTCACGACTCTTTTCCTTCTTTCTCTTCTCGCAACTCTTCTTTCACAACACTTCTTTCCCTTCTTTCTCTCCTCGCAGCTCTTCTTTCACAATACTTCTTTCCCTTCTTTCTCTCCTGACGATCTCGACTGAGTCTGCCTCTTTCTTCAACCTCGACTGTAGGTAACTTTTTGTTCATCTCTTTTTTAGCTAATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATCAATCTTTGCCTGTGCTTCATCTCTTCATCTCTCTGAGTTTCAACTACTCTAGTTTTTTCTTCTTCTTCTCTTCTTTTCTTCATCTCTGCTGCTTGCTCTGTTTCTAATTACTGACTGCTGCCTCCTCTGTTTTTTTTTTCTTCAATTCTTTTGCTTTTTTTTATTTTTTTATTTTGTGATCAGTCTAGCAGCCTTGTTGAAGAATAGGAGTTTGAATCTTTGTGACTTAATTATATTTTTGATTTTTTGCTTTATATGTTATGACTTATGAGTATTTTTGCCTATGTAATTTCTTTCAATCTAAGACTATATTACCTCTATTTAGTTATTTAATATTTTTTATTTTTATACTAAATGTCGCTTTTTTTTTCTAAAAAAAAGCGCGCTTCGCTTCTGTGAAGCAAGCCTTCGTAGCTTTTTTCCGCTTCTCGCTTCCCAAAACACGGATATAACAATTCGTGTGTGAAATAAATGATCAAAATGGATGAAAATATACATTTTAGATCCATTTATCCTTTTCTACTTAATATCCTTATATAGTGGGAGATACATTAACCAAAATCGATGTAAATTTGGACACCACAAGTCTATCATGGCTTTCTGACTATCCCATCAGCTAGGTTCCCTTCTAGAGGGCTCAAGTGTGATATTCATATTACTGGTTCTTTCCTGCTAGTATAGGAAAATATTATACAAGGTGCGACCATGTCTAGTGACCTCAACGTTAGATGATAGTGATCTAGCAAAGCTTACTCCTGAAGTATCTTCCTTACAACAACAACATACCCAGTATGATCCCACATAGTTAGGGTCTAGGGAAGGTAGAGTTTACACAGAACTTAACCCTACCTCAGAGGTATTGAAGTATCTTCCATATAAGACAAAATGTTGTCATATTTTTTTGTGTTAAGAATTTATTCCAATAGTATATATAGCAACTAGGTTTAAGGATAATCAATATGTCAAAGTCATTATAAAGATGATTTTGTACATTTCCAATTGTGGACCATACTTTCACTTGTTCGTGTGCAGGTAATCGATTTGTTTTTTATAAATCGTTTCAATGCAAGAATACAAACTCAAAATTATGCTATAATTGAAATTCAACTATGAAAGAATTATAACTCATAGTACTATTGCTGAAAACTCCAATTTGATAATTGCGTCGTCAAAGTATCAAATATCTTATAATAGGTCATAACTTTGTATCTTAATCATTCATAGAACTTGTGAAATTCCATGTTTTTAGCAATAAGATCTCAATTTCCCAATTCGACTCTAACATTAACTCTTAACATTAAGTCGATGTGGGTTTATTAGTTTGGCTGTATTCTCCATTCTAAAAAAAGTTTATCAGGAATCCTAAATAGCAAATGATGAAACTGCTAGTTCAAGAATAAAGACAAAACTTGTGTTTATATCATGTTACTCCGAGCCAACTTTAAATAAAGTGTTGTCTTAGCAGTTAGCACCGTTTCGGGAAAAATATATTTTCGATCATCAAGTTTGAAACCTAAATCAACTTCTTCCCCAAATTGAAAGCTTCTTTAAAATTCCAGATTATTGCCTCCTCAAATCTCCATTTATGAACAAGGTATTTTAACTTTTGATATAATGTTGAATCTAGTGCTGAATACCTCATTAATTTAAGGTCGCTTCACTCCTATTTCCTACTGTTTTATACCCTAAAGAAGAATTTAGTTAGTTGAATATGGTTTTAAAGAGTGACCTGAATTGTGATTACAGCAAAAAAATTTGCTTCTTCTCCTTTAGCTTGTGCTTAGGTTTTAAAGGTAGTAACTTCTATTTATGATCTTGAAGTTCTTCTTATTTTTTTTTTTGCTTTCTTGCTTCCTTTCCTTTTTTTTTCCTTCTTTCCTGTAGCTCTTGTTTCCCCCTTGCGAAATGCTGTTGGAAAGCTTCCTCTTAAAACCAGTGCTGCTGGCTTTTGTCTCTATTGCCAACCGCTCCTCTTCTTTTTTTCTCCTTTTTTAATAGCCGACGGGTCAAGGATAATGGGCTGGCTATTTTAGTTACTCGCTTATTTTAAATGTGCCAAGTCCAATTCTTTAAGTCATTACACACGTTGTGGGTCAGTGGTTATTTGGTCTCTTTTTTATGGTCCTATCCATTCATCTCGACATGAGCTAGTTTTTGGGGTTGAGTTATGCCGTGGTCCAATTCTTTGTCATGGTACCATAGTCAAGTCCATCCCAATTCATGTTTACCTGATGTTGGGCCTCCCATCTTATATTTTCTTCGCTCCAAAGGTTCAACCTTGAGCGCGTGCGACCGGGGTGGGTGGGTAGGGGGTTGGGGTTAAGGTTACCTAGTCTTTATATGATGTGGGCAATTCTTCCCTCATGAGCTAGCTTTAGGATTGAGTTAGACCCAAGGTTGTTTTTTATTTCAGAAGGTGAACAAGAAGATCGAAGGCGTCGGATGATGCTCCATTAGCCTTTATGTGGGTTATATTGAAAGAGAAAAAATAGGATAACATTTGAAGGGGTTGACAATGACTCTGTTAAATTAAAAAAGTAGCCTCTTGTGTATGATATCTCTTTGGTGTACCTATGAGGTTCCTATTTGTGTAGAAGACCGGATATCTTCTGTTGAGAACCATACATTTGTTTAGGTTTCTATACTTTTTGATATTTGACTTGTATTACCGATTTCCCATCATTGATAGTATTGCTTATTAAATTAATGAAAAAGGAGAAATGGTAAATGAAATTGCCTTATTGAATATATGACAGCTGTTTGAATAGTGCTAATTATGTCGTACACATTTTGATTGAACAGCCTCATTAGCTGCAAAGGCACAATATCTTATGCTAATGCCTTCCTTTTCCTCTTCATTCTTATTTGCTGTCCGTTGGTACCTCTGTTCTTCTCTTACCTCTTATTTGTGCATTCATTCATCTGTATATTATATGTTATTTGGCAGTTGATCCTCTTCTAAAATTTACCAAAAATTGATTAGCCTAGTTCTCTTGACATGGCTCATTGTAGATTATAGTGAATCCTCATATTTATGTCTGAATATATTTTCCCAACTGCCAATGTGGTTAGCAGAGAGCGATAGGATGGGGTTGGAAGGCATCTGATATGCAAAATATATGATTATATAAGTATTATGTTTGAGGTCAGGGTCAACTATACATTTGGTGCATAATTTAGAACAAGGACCAGCTCAAAATTGTTTTCTTCTTGTTTCCATTTAACTTCTTAATTTTTCTTATAACTCTCCTTGGCAGACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGAT</genome_strand>
        <mrna_strand>TAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E366712" ref_strand="+" ref_description="SGN-E366712 [cLPT-17-E20]">
      <seq>tcaaaactgataccaaatccaaacctgaggatgaggttcctgtttcgattccagtgaagatcgagaaggaggaagaggatgttcgagtggagaatgtgaaagagccggagaaattggttgattcatctgctgtcgtggttgaacctaagcttgaggttttggaaaacgatcagaaattggaggttcagactagcaacaaagaggatggaactgataatcagaaaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcgcccatcacccccacttcaagtggatactacaaacgacaccggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttnctcggaatttgcttcgtttgagcagtacatcaccatcttcagattctcaactga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94587" stop="101336"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94887" g_stop="95074" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="188" r_length="188" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95075" i_stop="100536" i_length="5462">
            <donor d_prob="0.391" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100537" g_stop="100644" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="296" r_length="108" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100781" g_stop="101036" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="552" r_length="256" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E366712" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E366712" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94887" e_stop="95074"/>
          <exon e_start="100537" e_stop="100644"/>
          <exon e_start="100781" e_stop="101036"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAGGTATTGAATTGCAATTATTGATCTATTTTGTTTGTATGGTGTTATCCATGGATTTTGCTGGCTTTAGTTATGATTCGCTTATGCATCTTTCTGTTTTCTCTTAGTAAGGAAGGGATCCCAGCCAATTCAGGGTAGAAGTTAAGGGTGTGTATACCTTACGAAGCTTTTTACCCTTTTTGCGATGAGGCTGCTCCAAGTCTGGACTCTCCAACCATGACCTACAGCTTTTCCTCATTTTTGTTTATTATGTTTAGGAATTCTTAATATATGTCAATAAAAAAATATGTATCAGATGATTTGTAAGAACTAATACTGTTTATTTCTATGGAAGAGCGTAATGATATATGTGTAGTTGGTTTAAGACTAGCATTTTTTTAGCAGAAGCGTCATGTACTGATTAGAGATGAGGAGGTATATTTGCCTGAGGGTTGGGATACTTACATTAGATCTGTTCGGGGGATACTGCTTTCAGAAATTAAGGATAAATGGAGAGACAGTGAATGCTACATGCTACATTGGATTTATGGAGATAGGGAGAAGAGTCGTTCTTTCCGTATAGGGTGCCCATGAAGGTGTGTTTCCTTGCTTGATTAGGGGCGGGTGAAGTGATATTGATGGCTGAGAACATGAGATAGAAAAGGAGCACCTATGTTGGTGTTACATCTACAGATGTTTGGGTGAATACGTAGACCTGTCTCCTGTTACATTTTCAGGTGGTTGTGCACTCATTGTTGGCAATTCTGAATCGTTTGGTGGATACATGAGTATTTGTCAGAGTTTCTCTATATCGGAAGCAATCTGTAATTCCAGACTTTTCACCTACTCGTTTAACCGGAACCCAACATACTAAATTTAAGAGAATATCAAATATGAAGTCGGTCGCTTTCACAAAACTTTAGACGTTCCCAGTTACTTCTTTACTGACACAAGCCAAAACCAAATTTACAAGACCGACACAAGGAGGAAAACTCTAGGATTTAAGCAAAATAATATACTATATTAGTCTAAATAGAATGATGTCCCATGCGAGGTAAGTGCGGAGCTTGTTAGCTCTGTGACTCTGTATGAGTCAAAGTGTCACCCTTAAATGAATTATCTTTGGGGGGGGGGGAGGAGTTGGATTCAGTTGCACTAATTGCGTGAGTAATAACATCAACCATACATTTTATATGGAGCAGGTATACATAAGGAATCATGCAATTTATAAGATCCTCAACTATGTCCTACTTAAATCAATATAGCCTAAGTTGCTCGGGTGTGGTTTCCGATAATGCGGACCTAGAGCTCAAATCCTATATGATCTAAATTTTTAGATTTGGGTATATGGATCCATGTATGGATATGGGAGCGGGGGTTCGGCTAAAAATAATTCAAATAGCTAAAAATAGAGTTATAAAGCCTAAGTTATGAGATATTATATGGACGTCTTGAGATGAAAATGTTGATCAAGAGGAGAAAGAGATAAAAGGAAAAAGAGTGACAATAGAAATTAATATATCCAAGGTATTTCATTTCTTCAATTTCACCTTAATTTTTGTTTTGCGCATATAAATCATTGAATCTGTCCAAATTTCTCCCTCAAATTTGGTTTAAGTATCCCAAATTGGTTGACCATATCGTTTACGGATGCCACACCATCACTCACACCCGTTTCGTGTCGACATGGGTGCGAGAACAAAGGCGAAGAGTCCGTGCAACTTAGGATATAACCATTGTTGTGAAAAGCGCAGAAAAAGCGCGCTTCAAAGCGACACGACCCTTGTGCGCTTTTTTATCTTGAGGCGAGGCGATCTGAAGAAAACTCTCGCTTCAGATGAAGAAGCGACCCTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAAAAGCGACAATTAGTTTTTTTTTAATAAAAAAATTAGGTTTTTTTTTATAAAAAAATCTGAAATATAACCTTCTCTCTCCTCACGACTCTTTTCCTTCTTTCTCTTCTCGCAACTCTTCTTTCACAACACTTCTTTCCCTTCTTTCTCTCCTCGCAGCTCTTCTTTCACAATACTTCTTTCCCTTCTTTCTCTCCTGACGATCTCGACTGAGTCTGCCTCTTTCTTCAACCTCGACTGTAGGTAACTTTTTGTTCATCTCTTTTTTAGCTAATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATCAATCTTTGCCTGTGCTTCATCTCTTCATCTCTCTGAGTTTCAACTACTCTAGTTTTTTCTTCTTCTTCTCTTCTTTTCTTCATCTCTGCTGCTTGCTCTGTTTCTAATTACTGACTGCTGCCTCCTCTGTTTTTTTTTTCTTCAATTCTTTTGCTTTTTTTTATTTTTTTATTTTGTGATCAGTCTAGCAGCCTTGTTGAAGAATAGGAGTTTGAATCTTTGTGACTTAATTATATTTTTGATTTTTTGCTTTATATGTTATGACTTATGAGTATTTTTGCCTATGTAATTTCTTTCAATCTAAGACTATATTACCTCTATTTAGTTATTTAATATTTTTTATTTTTATACTAAATGTCGCTTTTTTTTTCTAAAAAAAAGCGCGCTTCGCTTCTGTGAAGCAAGCCTTCGTAGCTTTTTTCCGCTTCTCGCTTCCCAAAACACGGATATAACAATTCGTGTGTGAAATAAATGATCAAAATGGATGAAAATATACATTTTAGATCCATTTATCCTTTTCTACTTAATATCCTTATATAGTGGGAGATACATTAACCAAAATCGATGTAAATTTGGACACCACAAGTCTATCATGGCTTTCTGACTATCCCATCAGCTAGGTTCCCTTCTAGAGGGCTCAAGTGTGATATTCATATTACTGGTTCTTTCCTGCTAGTATAGGAAAATATTATACAAGGTGCGACCATGTCTAGTGACCTCAACGTTAGATGATAGTGATCTAGCAAAGCTTACTCCTGAAGTATCTTCCTTACAACAACAACATACCCAGTATGATCCCACATAGTTAGGGTCTAGGGAAGGTAGAGTTTACACAGAACTTAACCCTACCTCAGAGGTATTGAAGTATCTTCCATATAAGACAAAATGTTGTCATATTTTTTTGTGTTAAGAATTTATTCCAATAGTATATATAGCAACTAGGTTTAAGGATAATCAATATGTCAAAGTCATTATAAAGATGATTTTGTACATTTCCAATTGTGGACCATACTTTCACTTGTTCGTGTGCAGGTAATCGATTTGTTTTTTATAAATCGTTTCAATGCAAGAATACAAACTCAAAATTATGCTATAATTGAAATTCAACTATGAAAGAATTATAACTCATAGTACTATTGCTGAAAACTCCAATTTGATAATTGCGTCGTCAAAGTATCAAATATCTTATAATAGGTCATAACTTTGTATCTTAATCATTCATAGAACTTGTGAAATTCCATGTTTTTAGCAATAAGATCTCAATTTCCCAATTCGACTCTAACATTAACTCTTAACATTAAGTCGATGTGGGTTTATTAGTTTGGCTGTATTCTCCATTCTAAAAAAAGTTTATCAGGAATCCTAAATAGCAAATGATGAAACTGCTAGTTCAAGAATAAAGACAAAACTTGTGTTTATATCATGTTACTCCGAGCCAACTTTAAATAAAGTGTTGTCTTAGCAGTTAGCACCGTTTCGGGAAAAATATATTTTCGATCATCAAGTTTGAAACCTAAATCAACTTCTTCCCCAAATTGAAAGCTTCTTTAAAATTCCAGATTATTGCCTCCTCAAATCTCCATTTATGAACAAGGTATTTTAACTTTTGATATAATGTTGAATCTAGTGCTGAATACCTCATTAATTTAAGGTCGCTTCACTCCTATTTCCTACTGTTTTATACCCTAAAGAAGAATTTAGTTAGTTGAATATGGTTTTAAAGAGTGACCTGAATTGTGATTACAGCAAAAAAATTTGCTTCTTCTCCTTTAGCTTGTGCTTAGGTTTTAAAGGTAGTAACTTCTATTTATGATCTTGAAGTTCTTCTTATTTTTTTTTTTGCTTTCTTGCTTCCTTTCCTTTTTTTTTCCTTCTTTCCTGTAGCTCTTGTTTCCCCCTTGCGAAATGCTGTTGGAAAGCTTCCTCTTAAAACCAGTGCTGCTGGCTTTTGTCTCTATTGCCAACCGCTCCTCTTCTTTTTTTCTCCTTTTTTAATAGCCGACGGGTCAAGGATAATGGGCTGGCTATTTTAGTTACTCGCTTATTTTAAATGTGCCAAGTCCAATTCTTTAAGTCATTACACACGTTGTGGGTCAGTGGTTATTTGGTCTCTTTTTTATGGTCCTATCCATTCATCTCGACATGAGCTAGTTTTTGGGGTTGAGTTATGCCGTGGTCCAATTCTTTGTCATGGTACCATAGTCAAGTCCATCCCAATTCATGTTTACCTGATGTTGGGCCTCCCATCTTATATTTTCTTCGCTCCAAAGGTTCAACCTTGAGCGCGTGCGACCGGGGTGGGTGGGTAGGGGGTTGGGGTTAAGGTTACCTAGTCTTTATATGATGTGGGCAATTCTTCCCTCATGAGCTAGCTTTAGGATTGAGTTAGACCCAAGGTTGTTTTTTATTTCAGAAGGTGAACAAGAAGATCGAAGGCGTCGGATGATGCTCCATTAGCCTTTATGTGGGTTATATTGAAAGAGAAAAAATAGGATAACATTTGAAGGGGTTGACAATGACTCTGTTAAATTAAAAAAGTAGCCTCTTGTGTATGATATCTCTTTGGTGTACCTATGAGGTTCCTATTTGTGTAGAAGACCGGATATCTTCTGTTGAGAACCATACATTTGTTTAGGTTTCTATACTTTTTGATATTTGACTTGTATTACCGATTTCCCATCATTGATAGTATTGCTTATTAAATTAATGAAAAAGGAGAAATGGTAAATGAAATTGCCTTATTGAATATATGACAGCTGTTTGAATAGTGCTAATTATGTCGTACACATTTTGATTGAACAGCCTCATTAGCTGCAAAGGCACAATATCTTATGCTAATGCCTTCCTTTTCCTCTTCATTCTTATTTGCTGTCCGTTGGTACCTCTGTTCTTCTCTTACCTCTTATTTGTGCATTCATTCATCTGTATATTATATGTTATTTGGCAGTTGATCCTCTTCTAAAATTTACCAAAAATTGATTAGCCTAGTTCTCTTGACATGGCTCATTGTAGATTATAGTGAATCCTCATATTTATGTCTGAATATATTTTCCCAACTGCCAATGTGGTTAGCAGAGAGCGATAGGATGGGGTTGGAAGGCATCTGATATGCAAAATATATGATTATATAAGTATTATGTTTGAGGTCAGGGTCAACTATACATTTGGTGCATAATTTAGAACAAGGACCAGCTCAAAATTGTTTTCTTCTTGTTTCCATTTAACTTCTTAATTTTTCTTATAACTCTCCTTGGCAGACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGA</genome_strand>
        <mrna_strand>TCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGTTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGCAACAAAGAGGATGGAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGCCCATCACCCCCACTTCAAGTGGATACTACAAACGACACCGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTNCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E366714" ref_strand="+" ref_description="SGN-E366714 [cLPT-17-E24]">
      <seq>aactgataccaaatccaaacctgaggatgaggttcctgtttcgattccagtgaagatcgagaaggaggaagaggatgttcgagtggagaatgtgaaagagccggagaaattggttgattcatctgctgtcgtggttgaacctaagcttgaggttttggaaaacgatcagaaattggaggttcagactagcaacaaagaggatggaactgataatcagaaaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcgcccatcacccccacttcaagtggatactacaaacgacaccggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcgtttgagcagtacatcaccatcttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94591" stop="101323"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94891" g_stop="95074" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="184" r_length="184" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95075" i_stop="100536" i_length="5462">
            <donor d_prob="0.391" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100537" g_stop="100644" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="292" r_length="108" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100781" g_stop="101023" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="535" r_length="243" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E366714" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E366714" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94891" e_stop="95074"/>
          <exon e_start="100537" e_stop="100644"/>
          <exon e_start="100781" e_stop="101023"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAGGTATTGAATTGCAATTATTGATCTATTTTGTTTGTATGGTGTTATCCATGGATTTTGCTGGCTTTAGTTATGATTCGCTTATGCATCTTTCTGTTTTCTCTTAGTAAGGAAGGGATCCCAGCCAATTCAGGGTAGAAGTTAAGGGTGTGTATACCTTACGAAGCTTTTTACCCTTTTTGCGATGAGGCTGCTCCAAGTCTGGACTCTCCAACCATGACCTACAGCTTTTCCTCATTTTTGTTTATTATGTTTAGGAATTCTTAATATATGTCAATAAAAAAATATGTATCAGATGATTTGTAAGAACTAATACTGTTTATTTCTATGGAAGAGCGTAATGATATATGTGTAGTTGGTTTAAGACTAGCATTTTTTTAGCAGAAGCGTCATGTACTGATTAGAGATGAGGAGGTATATTTGCCTGAGGGTTGGGATACTTACATTAGATCTGTTCGGGGGATACTGCTTTCAGAAATTAAGGATAAATGGAGAGACAGTGAATGCTACATGCTACATTGGATTTATGGAGATAGGGAGAAGAGTCGTTCTTTCCGTATAGGGTGCCCATGAAGGTGTGTTTCCTTGCTTGATTAGGGGCGGGTGAAGTGATATTGATGGCTGAGAACATGAGATAGAAAAGGAGCACCTATGTTGGTGTTACATCTACAGATGTTTGGGTGAATACGTAGACCTGTCTCCTGTTACATTTTCAGGTGGTTGTGCACTCATTGTTGGCAATTCTGAATCGTTTGGTGGATACATGAGTATTTGTCAGAGTTTCTCTATATCGGAAGCAATCTGTAATTCCAGACTTTTCACCTACTCGTTTAACCGGAACCCAACATACTAAATTTAAGAGAATATCAAATATGAAGTCGGTCGCTTTCACAAAACTTTAGACGTTCCCAGTTACTTCTTTACTGACACAAGCCAAAACCAAATTTACAAGACCGACACAAGGAGGAAAACTCTAGGATTTAAGCAAAATAATATACTATATTAGTCTAAATAGAATGATGTCCCATGCGAGGTAAGTGCGGAGCTTGTTAGCTCTGTGACTCTGTATGAGTCAAAGTGTCACCCTTAAATGAATTATCTTTGGGGGGGGGGGAGGAGTTGGATTCAGTTGCACTAATTGCGTGAGTAATAACATCAACCATACATTTTATATGGAGCAGGTATACATAAGGAATCATGCAATTTATAAGATCCTCAACTATGTCCTACTTAAATCAATATAGCCTAAGTTGCTCGGGTGTGGTTTCCGATAATGCGGACCTAGAGCTCAAATCCTATATGATCTAAATTTTTAGATTTGGGTATATGGATCCATGTATGGATATGGGAGCGGGGGTTCGGCTAAAAATAATTCAAATAGCTAAAAATAGAGTTATAAAGCCTAAGTTATGAGATATTATATGGACGTCTTGAGATGAAAATGTTGATCAAGAGGAGAAAGAGATAAAAGGAAAAAGAGTGACAATAGAAATTAATATATCCAAGGTATTTCATTTCTTCAATTTCACCTTAATTTTTGTTTTGCGCATATAAATCATTGAATCTGTCCAAATTTCTCCCTCAAATTTGGTTTAAGTATCCCAAATTGGTTGACCATATCGTTTACGGATGCCACACCATCACTCACACCCGTTTCGTGTCGACATGGGTGCGAGAACAAAGGCGAAGAGTCCGTGCAACTTAGGATATAACCATTGTTGTGAAAAGCGCAGAAAAAGCGCGCTTCAAAGCGACACGACCCTTGTGCGCTTTTTTATCTTGAGGCGAGGCGATCTGAAGAAAACTCTCGCTTCAGATGAAGAAGCGACCCTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAAAAGCGACAATTAGTTTTTTTTTAATAAAAAAATTAGGTTTTTTTTTATAAAAAAATCTGAAATATAACCTTCTCTCTCCTCACGACTCTTTTCCTTCTTTCTCTTCTCGCAACTCTTCTTTCACAACACTTCTTTCCCTTCTTTCTCTCCTCGCAGCTCTTCTTTCACAATACTTCTTTCCCTTCTTTCTCTCCTGACGATCTCGACTGAGTCTGCCTCTTTCTTCAACCTCGACTGTAGGTAACTTTTTGTTCATCTCTTTTTTAGCTAATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATCAATCTTTGCCTGTGCTTCATCTCTTCATCTCTCTGAGTTTCAACTACTCTAGTTTTTTCTTCTTCTTCTCTTCTTTTCTTCATCTCTGCTGCTTGCTCTGTTTCTAATTACTGACTGCTGCCTCCTCTGTTTTTTTTTTCTTCAATTCTTTTGCTTTTTTTTATTTTTTTATTTTGTGATCAGTCTAGCAGCCTTGTTGAAGAATAGGAGTTTGAATCTTTGTGACTTAATTATATTTTTGATTTTTTGCTTTATATGTTATGACTTATGAGTATTTTTGCCTATGTAATTTCTTTCAATCTAAGACTATATTACCTCTATTTAGTTATTTAATATTTTTTATTTTTATACTAAATGTCGCTTTTTTTTTCTAAAAAAAAGCGCGCTTCGCTTCTGTGAAGCAAGCCTTCGTAGCTTTTTTCCGCTTCTCGCTTCCCAAAACACGGATATAACAATTCGTGTGTGAAATAAATGATCAAAATGGATGAAAATATACATTTTAGATCCATTTATCCTTTTCTACTTAATATCCTTATATAGTGGGAGATACATTAACCAAAATCGATGTAAATTTGGACACCACAAGTCTATCATGGCTTTCTGACTATCCCATCAGCTAGGTTCCCTTCTAGAGGGCTCAAGTGTGATATTCATATTACTGGTTCTTTCCTGCTAGTATAGGAAAATATTATACAAGGTGCGACCATGTCTAGTGACCTCAACGTTAGATGATAGTGATCTAGCAAAGCTTACTCCTGAAGTATCTTCCTTACAACAACAACATACCCAGTATGATCCCACATAGTTAGGGTCTAGGGAAGGTAGAGTTTACACAGAACTTAACCCTACCTCAGAGGTATTGAAGTATCTTCCATATAAGACAAAATGTTGTCATATTTTTTTGTGTTAAGAATTTATTCCAATAGTATATATAGCAACTAGGTTTAAGGATAATCAATATGTCAAAGTCATTATAAAGATGATTTTGTACATTTCCAATTGTGGACCATACTTTCACTTGTTCGTGTGCAGGTAATCGATTTGTTTTTTATAAATCGTTTCAATGCAAGAATACAAACTCAAAATTATGCTATAATTGAAATTCAACTATGAAAGAATTATAACTCATAGTACTATTGCTGAAAACTCCAATTTGATAATTGCGTCGTCAAAGTATCAAATATCTTATAATAGGTCATAACTTTGTATCTTAATCATTCATAGAACTTGTGAAATTCCATGTTTTTAGCAATAAGATCTCAATTTCCCAATTCGACTCTAACATTAACTCTTAACATTAAGTCGATGTGGGTTTATTAGTTTGGCTGTATTCTCCATTCTAAAAAAAGTTTATCAGGAATCCTAAATAGCAAATGATGAAACTGCTAGTTCAAGAATAAAGACAAAACTTGTGTTTATATCATGTTACTCCGAGCCAACTTTAAATAAAGTGTTGTCTTAGCAGTTAGCACCGTTTCGGGAAAAATATATTTTCGATCATCAAGTTTGAAACCTAAATCAACTTCTTCCCCAAATTGAAAGCTTCTTTAAAATTCCAGATTATTGCCTCCTCAAATCTCCATTTATGAACAAGGTATTTTAACTTTTGATATAATGTTGAATCTAGTGCTGAATACCTCATTAATTTAAGGTCGCTTCACTCCTATTTCCTACTGTTTTATACCCTAAAGAAGAATTTAGTTAGTTGAATATGGTTTTAAAGAGTGACCTGAATTGTGATTACAGCAAAAAAATTTGCTTCTTCTCCTTTAGCTTGTGCTTAGGTTTTAAAGGTAGTAACTTCTATTTATGATCTTGAAGTTCTTCTTATTTTTTTTTTTGCTTTCTTGCTTCCTTTCCTTTTTTTTTCCTTCTTTCCTGTAGCTCTTGTTTCCCCCTTGCGAAATGCTGTTGGAAAGCTTCCTCTTAAAACCAGTGCTGCTGGCTTTTGTCTCTATTGCCAACCGCTCCTCTTCTTTTTTTCTCCTTTTTTAATAGCCGACGGGTCAAGGATAATGGGCTGGCTATTTTAGTTACTCGCTTATTTTAAATGTGCCAAGTCCAATTCTTTAAGTCATTACACACGTTGTGGGTCAGTGGTTATTTGGTCTCTTTTTTATGGTCCTATCCATTCATCTCGACATGAGCTAGTTTTTGGGGTTGAGTTATGCCGTGGTCCAATTCTTTGTCATGGTACCATAGTCAAGTCCATCCCAATTCATGTTTACCTGATGTTGGGCCTCCCATCTTATATTTTCTTCGCTCCAAAGGTTCAACCTTGAGCGCGTGCGACCGGGGTGGGTGGGTAGGGGGTTGGGGTTAAGGTTACCTAGTCTTTATATGATGTGGGCAATTCTTCCCTCATGAGCTAGCTTTAGGATTGAGTTAGACCCAAGGTTGTTTTTTATTTCAGAAGGTGAACAAGAAGATCGAAGGCGTCGGATGATGCTCCATTAGCCTTTATGTGGGTTATATTGAAAGAGAAAAAATAGGATAACATTTGAAGGGGTTGACAATGACTCTGTTAAATTAAAAAAGTAGCCTCTTGTGTATGATATCTCTTTGGTGTACCTATGAGGTTCCTATTTGTGTAGAAGACCGGATATCTTCTGTTGAGAACCATACATTTGTTTAGGTTTCTATACTTTTTGATATTTGACTTGTATTACCGATTTCCCATCATTGATAGTATTGCTTATTAAATTAATGAAAAAGGAGAAATGGTAAATGAAATTGCCTTATTGAATATATGACAGCTGTTTGAATAGTGCTAATTATGTCGTACACATTTTGATTGAACAGCCTCATTAGCTGCAAAGGCACAATATCTTATGCTAATGCCTTCCTTTTCCTCTTCATTCTTATTTGCTGTCCGTTGGTACCTCTGTTCTTCTCTTACCTCTTATTTGTGCATTCATTCATCTGTATATTATATGTTATTTGGCAGTTGATCCTCTTCTAAAATTTACCAAAAATTGATTAGCCTAGTTCTCTTGACATGGCTCATTGTAGATTATAGTGAATCCTCATATTTATGTCTGAATATATTTTCCCAACTGCCAATGTGGTTAGCAGAGAGCGATAGGATGGGGTTGGAAGGCATCTGATATGCAAAATATATGATTATATAAGTATTATGTTTGAGGTCAGGGTCAACTATACATTTGGTGCATAATTTAGAACAAGGACCAGCTCAAAATTGTTTTCTTCTTGTTTCCATTTAACTTCTTAATTTTTCTTATAACTCTCCTTGGCAGACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCA</genome_strand>
        <mrna_strand>AACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGTTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGCAACAAAGAGGATGGAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGCCCATCACCCCCACTTCAAGTGGATACTACAAACGACACCGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E276937" ref_strand="+" ref_description="SGN-E276937 [cLEN-22-I20]">
      <seq>tcgtggttgaacctaagcttgaggttttggaaaacgatcagaaattggagggtcaggtgaatccctctggtgtggagactagcaacaaagaggatgcaactgataatcagaaaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcgtttgagcagtacatcaccatcttcagattctcaactgaggaagaccccctataatgtggttcctctcgcttcacgatctgttggagttactgttagtccttcacggtttgcacctccgggacagcaagggcaaccttcaagtctccccccagtgtccttatctggaacgaacattgttgcctcctctccttctcctgtagcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94719" stop="104345"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95019" g_stop="95095" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95096" i_stop="100536" i_length="5441">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100537" g_stop="100644" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="185" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100781" g_stop="101056" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="461" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103900" g_stop="104045" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="607" r_length="146" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E276937" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E276937" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95019" e_stop="95095"/>
          <exon e_start="100537" e_stop="100644"/>
          <exon e_start="100781" e_stop="101056"/>
          <exon e_start="103900" e_stop="104045"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAGGTATTGAATTGCAATTATTGATCTATTTTGTTTGTATGGTGTTATCCATGGATTTTGCTGGCTTTAGTTATGATTCGCTTATGCATCTTTCTGTTTTCTCTTAGTAAGGAAGGGATCCCAGCCAATTCAGGGTAGAAGTTAAGGGTGTGTATACCTTACGAAGCTTTTTACCCTTTTTGCGATGAGGCTGCTCCAAGTCTGGACTCTCCAACCATGACCTACAGCTTTTCCTCATTTTTGTTTATTATGTTTAGGAATTCTTAATATATGTCAATAAAAAAATATGTATCAGATGATTTGTAAGAACTAATACTGTTTATTTCTATGGAAGAGCGTAATGATATATGTGTAGTTGGTTTAAGACTAGCATTTTTTTAGCAGAAGCGTCATGTACTGATTAGAGATGAGGAGGTATATTTGCCTGAGGGTTGGGATACTTACATTAGATCTGTTCGGGGGATACTGCTTTCAGAAATTAAGGATAAATGGAGAGACAGTGAATGCTACATGCTACATTGGATTTATGGAGATAGGGAGAAGAGTCGTTCTTTCCGTATAGGGTGCCCATGAAGGTGTGTTTCCTTGCTTGATTAGGGGCGGGTGAAGTGATATTGATGGCTGAGAACATGAGATAGAAAAGGAGCACCTATGTTGGTGTTACATCTACAGATGTTTGGGTGAATACGTAGACCTGTCTCCTGTTACATTTTCAGGTGGTTGTGCACTCATTGTTGGCAATTCTGAATCGTTTGGTGGATACATGAGTATTTGTCAGAGTTTCTCTATATCGGAAGCAATCTGTAATTCCAGACTTTTCACCTACTCGTTTAACCGGAACCCAACATACTAAATTTAAGAGAATATCAAATATGAAGTCGGTCGCTTTCACAAAACTTTAGACGTTCCCAGTTACTTCTTTACTGACACAAGCCAAAACCAAATTTACAAGACCGACACAAGGAGGAAAACTCTAGGATTTAAGCAAAATAATATACTATATTAGTCTAAATAGAATGATGTCCCATGCGAGGTAAGTGCGGAGCTTGTTAGCTCTGTGACTCTGTATGAGTCAAAGTGTCACCCTTAAATGAATTATCTTTGGGGGGGGGGGAGGAGTTGGATTCAGTTGCACTAATTGCGTGAGTAATAACATCAACCATACATTTTATATGGAGCAGGTATACATAAGGAATCATGCAATTTATAAGATCCTCAACTATGTCCTACTTAAATCAATATAGCCTAAGTTGCTCGGGTGTGGTTTCCGATAATGCGGACCTAGAGCTCAAATCCTATATGATCTAAATTTTTAGATTTGGGTATATGGATCCATGTATGGATATGGGAGCGGGGGTTCGGCTAAAAATAATTCAAATAGCTAAAAATAGAGTTATAAAGCCTAAGTTATGAGATATTATATGGACGTCTTGAGATGAAAATGTTGATCAAGAGGAGAAAGAGATAAAAGGAAAAAGAGTGACAATAGAAATTAATATATCCAAGGTATTTCATTTCTTCAATTTCACCTTAATTTTTGTTTTGCGCATATAAATCATTGAATCTGTCCAAATTTCTCCCTCAAATTTGGTTTAAGTATCCCAAATTGGTTGACCATATCGTTTACGGATGCCACACCATCACTCACACCCGTTTCGTGTCGACATGGGTGCGAGAACAAAGGCGAAGAGTCCGTGCAACTTAGGATATAACCATTGTTGTGAAAAGCGCAGAAAAAGCGCGCTTCAAAGCGACACGACCCTTGTGCGCTTTTTTATCTTGAGGCGAGGCGATCTGAAGAAAACTCTCGCTTCAGATGAAGAAGCGACCCTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAAAAGCGACAATTAGTTTTTTTTTAATAAAAAAATTAGGTTTTTTTTTATAAAAAAATCTGAAATATAACCTTCTCTCTCCTCACGACTCTTTTCCTTCTTTCTCTTCTCGCAACTCTTCTTTCACAACACTTCTTTCCCTTCTTTCTCTCCTCGCAGCTCTTCTTTCACAATACTTCTTTCCCTTCTTTCTCTCCTGACGATCTCGACTGAGTCTGCCTCTTTCTTCAACCTCGACTGTAGGTAACTTTTTGTTCATCTCTTTTTTAGCTAATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATCAATCTTTGCCTGTGCTTCATCTCTTCATCTCTCTGAGTTTCAACTACTCTAGTTTTTTCTTCTTCTTCTCTTCTTTTCTTCATCTCTGCTGCTTGCTCTGTTTCTAATTACTGACTGCTGCCTCCTCTGTTTTTTTTTTCTTCAATTCTTTTGCTTTTTTTTATTTTTTTATTTTGTGATCAGTCTAGCAGCCTTGTTGAAGAATAGGAGTTTGAATCTTTGTGACTTAATTATATTTTTGATTTTTTGCTTTATATGTTATGACTTATGAGTATTTTTGCCTATGTAATTTCTTTCAATCTAAGACTATATTACCTCTATTTAGTTATTTAATATTTTTTATTTTTATACTAAATGTCGCTTTTTTTTTCTAAAAAAAAGCGCGCTTCGCTTCTGTGAAGCAAGCCTTCGTAGCTTTTTTCCGCTTCTCGCTTCCCAAAACACGGATATAACAATTCGTGTGTGAAATAAATGATCAAAATGGATGAAAATATACATTTTAGATCCATTTATCCTTTTCTACTTAATATCCTTATATAGTGGGAGATACATTAACCAAAATCGATGTAAATTTGGACACCACAAGTCTATCATGGCTTTCTGACTATCCCATCAGCTAGGTTCCCTTCTAGAGGGCTCAAGTGTGATATTCATATTACTGGTTCTTTCCTGCTAGTATAGGAAAATATTATACAAGGTGCGACCATGTCTAGTGACCTCAACGTTAGATGATAGTGATCTAGCAAAGCTTACTCCTGAAGTATCTTCCTTACAACAACAACATACCCAGTATGATCCCACATAGTTAGGGTCTAGGGAAGGTAGAGTTTACACAGAACTTAACCCTACCTCAGAGGTATTGAAGTATCTTCCATATAAGACAAAATGTTGTCATATTTTTTTGTGTTAAGAATTTATTCCAATAGTATATATAGCAACTAGGTTTAAGGATAATCAATATGTCAAAGTCATTATAAAGATGATTTTGTACATTTCCAATTGTGGACCATACTTTCACTTGTTCGTGTGCAGGTAATCGATTTGTTTTTTATAAATCGTTTCAATGCAAGAATACAAACTCAAAATTATGCTATAATTGAAATTCAACTATGAAAGAATTATAACTCATAGTACTATTGCTGAAAACTCCAATTTGATAATTGCGTCGTCAAAGTATCAAATATCTTATAATAGGTCATAACTTTGTATCTTAATCATTCATAGAACTTGTGAAATTCCATGTTTTTAGCAATAAGATCTCAATTTCCCAATTCGACTCTAACATTAACTCTTAACATTAAGTCGATGTGGGTTTATTAGTTTGGCTGTATTCTCCATTCTAAAAAAAGTTTATCAGGAATCCTAAATAGCAAATGATGAAACTGCTAGTTCAAGAATAAAGACAAAACTTGTGTTTATATCATGTTACTCCGAGCCAACTTTAAATAAAGTGTTGTCTTAGCAGTTAGCACCGTTTCGGGAAAAATATATTTTCGATCATCAAGTTTGAAACCTAAATCAACTTCTTCCCCAAATTGAAAGCTTCTTTAAAATTCCAGATTATTGCCTCCTCAAATCTCCATTTATGAACAAGGTATTTTAACTTTTGATATAATGTTGAATCTAGTGCTGAATACCTCATTAATTTAAGGTCGCTTCACTCCTATTTCCTACTGTTTTATACCCTAAAGAAGAATTTAGTTAGTTGAATATGGTTTTAAAGAGTGACCTGAATTGTGATTACAGCAAAAAAATTTGCTTCTTCTCCTTTAGCTTGTGCTTAGGTTTTAAAGGTAGTAACTTCTATTTATGATCTTGAAGTTCTTCTTATTTTTTTTTTTGCTTTCTTGCTTCCTTTCCTTTTTTTTTCCTTCTTTCCTGTAGCTCTTGTTTCCCCCTTGCGAAATGCTGTTGGAAAGCTTCCTCTTAAAACCAGTGCTGCTGGCTTTTGTCTCTATTGCCAACCGCTCCTCTTCTTTTTTTCTCCTTTTTTAATAGCCGACGGGTCAAGGATAATGGGCTGGCTATTTTAGTTACTCGCTTATTTTAAATGTGCCAAGTCCAATTCTTTAAGTCATTACACACGTTGTGGGTCAGTGGTTATTTGGTCTCTTTTTTATGGTCCTATCCATTCATCTCGACATGAGCTAGTTTTTGGGGTTGAGTTATGCCGTGGTCCAATTCTTTGTCATGGTACCATAGTCAAGTCCATCCCAATTCATGTTTACCTGATGTTGGGCCTCCCATCTTATATTTTCTTCGCTCCAAAGGTTCAACCTTGAGCGCGTGCGACCGGGGTGGGTGGGTAGGGGGTTGGGGTTAAGGTTACCTAGTCTTTATATGATGTGGGCAATTCTTCCCTCATGAGCTAGCTTTAGGATTGAGTTAGACCCAAGGTTGTTTTTTATTTCAGAAGGTGAACAAGAAGATCGAAGGCGTCGGATGATGCTCCATTAGCCTTTATGTGGGTTATATTGAAAGAGAAAAAATAGGATAACATTTGAAGGGGTTGACAATGACTCTGTTAAATTAAAAAAGTAGCCTCTTGTGTATGATATCTCTTTGGTGTACCTATGAGGTTCCTATTTGTGTAGAAGACCGGATATCTTCTGTTGAGAACCATACATTTGTTTAGGTTTCTATACTTTTTGATATTTGACTTGTATTACCGATTTCCCATCATTGATAGTATTGCTTATTAAATTAATGAAAAAGGAGAAATGGTAAATGAAATTGCCTTATTGAATATATGACAGCTGTTTGAATAGTGCTAATTATGTCGTACACATTTTGATTGAACAGCCTCATTAGCTGCAAAGGCACAATATCTTATGCTAATGCCTTCCTTTTCCTCTTCATTCTTATTTGCTGTCCGTTGGTACCTCTGTTCTTCTCTTACCTCTTATTTGTGCATTCATTCATCTGTATATTATATGTTATTTGGCAGTTGATCCTCTTCTAAAATTTACCAAAAATTGATTAGCCTAGTTCTCTTGACATGGCTCATTGTAGATTATAGTGAATCCTCATATTTATGTCTGAATATATTTTCCCAACTGCCAATGTGGTTAGCAGAGAGCGATAGGATGGGGTTGGAAGGCATCTGATATGCAAAATATATGATTATATAAGTATTATGTTTGAGGTCAGGGTCAACTATACATTTGGTGCATAATTTAGAACAAGGACCAGCTCAAAATTGTTTTCTTCTTGTTTCCATTTAACTTCTTAATTTTTCTTATAACTCTCCTTGGCAGACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTGGTAAGTGCCCTATCTATGCGTGCATTGTTACCTTTGGCTTTCATTTGTGGCGCTACACCACCAGGAGTGGAAAAAGAGGGCTTTAATTTTTGTTTCTAATATAATTAATCTAGCAAAGATTTAAAAAGTTTTAAGTAAAGCAACAACATTCAATATGTGCAAGACTGCAAGTTAGTTCATCATATTATTGCTGGTTCACTCCCTTGAACCAAGTCTTCTATTTATCTTCTTCCTCAATGGAGCAGATCTTAATTTTTCTTTCATAGAACCATGTCCAAGGCATCTCGAAATGTGTGCTCTTGGTAACATTTGCTGAAAATTAAGGACCCCATATTGAACTTCTATTGGACATGAGATTTTGTTACAATTGTGTCTCTGTAACTAGTTTTGAGCTGTTCCAATCATTTTCTGCCACTTGTTGGACTAATTGGACCTTGCAATAAATTATGTTGCTACTTTGCACATGCCATAATAAGGGTTAGTGCTTTGACTAAGGGAAGATGATATATGTATATATATATATATGTATATATATATATATTATCTTGTTGTTGCATCAATGGAGAAGTTTATGTGCTATTTTACCTTGTTAATACTAGTTGTAAGAGCAAAAATTACTTTGTGGCCATTTTCTTCAGTGCAAACTGGGAATCAACATGTGGGATGAGGGATTATTGGAGTTATATATCAGCCTTCAACCACTTCCCCTTGATGTGAAATTTTCAGTCCCCTTTCTTTGTGAATAATGGAGTTCCAGAGAATGTACGATGTTCGGAGACTTGAACCAAGAGGTGCATCCTTAGATTACGTTAGGGCAATTAAATACATGTACTATGGAGCAAGGAAACTCAGATCACTTCTCGTTGTGATGGGGTTGCACCAGGGATCGACACATAGCCCATTTCTAGTTACTAACACGACTTATCCTAGGAAAAGTCCATGATATATGCTCTTTGCAGATGACAATGTGGTAATGAGACCAGGACAGAGTTAACAATAGGTGCCTTAACAATATATTGGAAATTTGAGGACAGACGTTGGAGTATAAAGAGTCTGGGTTGAGTAGGACTTAGACAAAATACTTGAAGTTCAAGTTCAATGACGTAAAACACATGGTAGATGTGGAAGTAAGGATTGAAACAAGCAGGGATCAATGATTCAGGAAAATAAGGAGATAGACGAAGATGTTACACATTGTATTGGAGCAGGTGGATGACGTTCACTGTCTTTTATGATAAGATTGTACCACCAAAGCCTTAAGGTAGGTATTACAAAGTGGTGGTCAGACTAGCTATGGACAGAGTGTTGACTAGACAAGAACTCGCATGTATAGAAGATGAGAGTAGTAGAAATGAGAATGTTGAGTTGGATGTTTGGGCATACTAAGATTGAGATTAGGAATGAAGCTATACGCGACATTGTGGGATAGGGCGCCTTGGTGAACAAGATGAGGCATGTGAAGCTGAGATGGTTCGAACATGTGAAGGAAACATGCATGAATACCCCGATTAGGAGCGAGAGGTTGGCTATAGAGGATGTAACATGATGTAGAGGTAGACCGAGAAGTCTCAAAAGAAATGATTAGATAGGACATGACTCATGCAGCTTACCTTTATGAGGACATGACCTTGGCCCTAGATAGGAAGATATGGCGGTCAAAAATTAGGGTAGAAGGTCAGTAGGTCGAACATTGTCTTGTTCTCTCTTACTGTCTTATTCGATTTTAGTATTACATGATTTTTCATTTGCTAACAGCTACCGTTATTTTAAATTTTTTGGTGTTGCTATTGCTCTCTTTATTGATTTCAGCATGACTTTGATTTTAGGATTACATTATTGTATTTGCTTTGCATACTTGTTTTTTATATGCTTTACCTGTGTCGTTTATCTGGTAGATACAACCTCTCTACCTTTCAAAAGGTAGGGGTAAGGCCGTGTACACACCATCCTCCTCAGACCCCACTTGTGGGATTATAACTGGCCCAGTTGAGCTGGGTATGTTTTTATTGGATCTCCAGATGAAGACCAGACAATACTTTTCTTGACAAATTGCTTTACGTGGAAGGCTGCTGATACTGCATTAGTTGCTTACATTTGGTTTTCACTAGACATCTTTTTCATATTATACATAAATATGCAGGCTACACTAGAAACTACTATATAGAATTGGATAATCCGTAGTGAATAAATTTATCTTGGGTCTGTTTTGTTTTCTCACTCCATGTAGCATGGGCACTTTATTAGATACATATTCAAGTATAGTTTAAGGCTCCACCTGCAAGGACTTTTTTAACTTTAACTTCTTCCAATTTTTGCAAAGTGGACTATTTGTTAAATCAAAAGTAGATATATATTAGCAGCTTCAAAAAAAAAAAGTAGATGTATATTAGAATCTAGCTATTAGTAGTCCTTTGTAATTATAATGATGAACAACAATATATTTTCCTAATCATATGTTAGTCGACTTACTAGTTAATTAACTAAATAGTTCTTATTGTATCCTCAGGCTACGTTCCTTTGAGGTCTACTTTGATATATAGGGTGAAATGGTAGGGCAAAGTGACAAGACACTGAAGAAAACAGCTATAAGAAGAAAAGATATGAAAGCAGATGAAGAATTAGTTCTCATAAACCAGTTAAAAAAAAGTCATGAGATTACCATTAAGTAGCTTATCTAGTAAAATTTGAGTCAGGGAGCAGGGAGCTGAACTATACACCACAGATAAAAATCAGTTCATAAAAAATTCAGCCAATTGGTTTATGAGAAAACTAATTCTTAAATAGTATGTAATAAATTTCACTAGTTCAAGAAATCCATTCTCACTTGCTGTCTATTTTTTCAGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATC</genome_strand>
        <mrna_strand>TCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E295291" ref_strand="+" ref_description="SGN-E295291 [cLET-20-N15]">
      <seq>ggaaaacgatcagaaattggagggtcaggtgaatccctctggtgtggagactagcaacaaagaggatgcaactgataatcagaaaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcgtttgagcagtacatcaccatcttcagattctcaactgaggaagaccccctataatgtggttcctctcgcttcacgatctgttggagttactgttagtccttcacggtttgcacctccgggacagcaagggcaaccttcaagtctccccccagtgtccttatctggaacgaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94747" stop="104314"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95047" g_stop="95095" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95096" i_stop="100536" i_length="5441">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100537" g_stop="100644" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="157" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100781" g_stop="101056" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="433" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103900" g_stop="104014" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="548" r_length="115" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E295291" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>548</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E295291" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95047" e_stop="95095"/>
          <exon e_start="100537" e_stop="100644"/>
          <exon e_start="100781" e_stop="101056"/>
          <exon e_start="103900" e_stop="104014"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAGGTATTGAATTGCAATTATTGATCTATTTTGTTTGTATGGTGTTATCCATGGATTTTGCTGGCTTTAGTTATGATTCGCTTATGCATCTTTCTGTTTTCTCTTAGTAAGGAAGGGATCCCAGCCAATTCAGGGTAGAAGTTAAGGGTGTGTATACCTTACGAAGCTTTTTACCCTTTTTGCGATGAGGCTGCTCCAAGTCTGGACTCTCCAACCATGACCTACAGCTTTTCCTCATTTTTGTTTATTATGTTTAGGAATTCTTAATATATGTCAATAAAAAAATATGTATCAGATGATTTGTAAGAACTAATACTGTTTATTTCTATGGAAGAGCGTAATGATATATGTGTAGTTGGTTTAAGACTAGCATTTTTTTAGCAGAAGCGTCATGTACTGATTAGAGATGAGGAGGTATATTTGCCTGAGGGTTGGGATACTTACATTAGATCTGTTCGGGGGATACTGCTTTCAGAAATTAAGGATAAATGGAGAGACAGTGAATGCTACATGCTACATTGGATTTATGGAGATAGGGAGAAGAGTCGTTCTTTCCGTATAGGGTGCCCATGAAGGTGTGTTTCCTTGCTTGATTAGGGGCGGGTGAAGTGATATTGATGGCTGAGAACATGAGATAGAAAAGGAGCACCTATGTTGGTGTTACATCTACAGATGTTTGGGTGAATACGTAGACCTGTCTCCTGTTACATTTTCAGGTGGTTGTGCACTCATTGTTGGCAATTCTGAATCGTTTGGTGGATACATGAGTATTTGTCAGAGTTTCTCTATATCGGAAGCAATCTGTAATTCCAGACTTTTCACCTACTCGTTTAACCGGAACCCAACATACTAAATTTAAGAGAATATCAAATATGAAGTCGGTCGCTTTCACAAAACTTTAGACGTTCCCAGTTACTTCTTTACTGACACAAGCCAAAACCAAATTTACAAGACCGACACAAGGAGGAAAACTCTAGGATTTAAGCAAAATAATATACTATATTAGTCTAAATAGAATGATGTCCCATGCGAGGTAAGTGCGGAGCTTGTTAGCTCTGTGACTCTGTATGAGTCAAAGTGTCACCCTTAAATGAATTATCTTTGGGGGGGGGGGAGGAGTTGGATTCAGTTGCACTAATTGCGTGAGTAATAACATCAACCATACATTTTATATGGAGCAGGTATACATAAGGAATCATGCAATTTATAAGATCCTCAACTATGTCCTACTTAAATCAATATAGCCTAAGTTGCTCGGGTGTGGTTTCCGATAATGCGGACCTAGAGCTCAAATCCTATATGATCTAAATTTTTAGATTTGGGTATATGGATCCATGTATGGATATGGGAGCGGGGGTTCGGCTAAAAATAATTCAAATAGCTAAAAATAGAGTTATAAAGCCTAAGTTATGAGATATTATATGGACGTCTTGAGATGAAAATGTTGATCAAGAGGAGAAAGAGATAAAAGGAAAAAGAGTGACAATAGAAATTAATATATCCAAGGTATTTCATTTCTTCAATTTCACCTTAATTTTTGTTTTGCGCATATAAATCATTGAATCTGTCCAAATTTCTCCCTCAAATTTGGTTTAAGTATCCCAAATTGGTTGACCATATCGTTTACGGATGCCACACCATCACTCACACCCGTTTCGTGTCGACATGGGTGCGAGAACAAAGGCGAAGAGTCCGTGCAACTTAGGATATAACCATTGTTGTGAAAAGCGCAGAAAAAGCGCGCTTCAAAGCGACACGACCCTTGTGCGCTTTTTTATCTTGAGGCGAGGCGATCTGAAGAAAACTCTCGCTTCAGATGAAGAAGCGACCCTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAAAAGCGACAATTAGTTTTTTTTTAATAAAAAAATTAGGTTTTTTTTTATAAAAAAATCTGAAATATAACCTTCTCTCTCCTCACGACTCTTTTCCTTCTTTCTCTTCTCGCAACTCTTCTTTCACAACACTTCTTTCCCTTCTTTCTCTCCTCGCAGCTCTTCTTTCACAATACTTCTTTCCCTTCTTTCTCTCCTGACGATCTCGACTGAGTCTGCCTCTTTCTTCAACCTCGACTGTAGGTAACTTTTTGTTCATCTCTTTTTTAGCTAATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATCAATCTTTGCCTGTGCTTCATCTCTTCATCTCTCTGAGTTTCAACTACTCTAGTTTTTTCTTCTTCTTCTCTTCTTTTCTTCATCTCTGCTGCTTGCTCTGTTTCTAATTACTGACTGCTGCCTCCTCTGTTTTTTTTTTCTTCAATTCTTTTGCTTTTTTTTATTTTTTTATTTTGTGATCAGTCTAGCAGCCTTGTTGAAGAATAGGAGTTTGAATCTTTGTGACTTAATTATATTTTTGATTTTTTGCTTTATATGTTATGACTTATGAGTATTTTTGCCTATGTAATTTCTTTCAATCTAAGACTATATTACCTCTATTTAGTTATTTAATATTTTTTATTTTTATACTAAATGTCGCTTTTTTTTTCTAAAAAAAAGCGCGCTTCGCTTCTGTGAAGCAAGCCTTCGTAGCTTTTTTCCGCTTCTCGCTTCCCAAAACACGGATATAACAATTCGTGTGTGAAATAAATGATCAAAATGGATGAAAATATACATTTTAGATCCATTTATCCTTTTCTACTTAATATCCTTATATAGTGGGAGATACATTAACCAAAATCGATGTAAATTTGGACACCACAAGTCTATCATGGCTTTCTGACTATCCCATCAGCTAGGTTCCCTTCTAGAGGGCTCAAGTGTGATATTCATATTACTGGTTCTTTCCTGCTAGTATAGGAAAATATTATACAAGGTGCGACCATGTCTAGTGACCTCAACGTTAGATGATAGTGATCTAGCAAAGCTTACTCCTGAAGTATCTTCCTTACAACAACAACATACCCAGTATGATCCCACATAGTTAGGGTCTAGGGAAGGTAGAGTTTACACAGAACTTAACCCTACCTCAGAGGTATTGAAGTATCTTCCATATAAGACAAAATGTTGTCATATTTTTTTGTGTTAAGAATTTATTCCAATAGTATATATAGCAACTAGGTTTAAGGATAATCAATATGTCAAAGTCATTATAAAGATGATTTTGTACATTTCCAATTGTGGACCATACTTTCACTTGTTCGTGTGCAGGTAATCGATTTGTTTTTTATAAATCGTTTCAATGCAAGAATACAAACTCAAAATTATGCTATAATTGAAATTCAACTATGAAAGAATTATAACTCATAGTACTATTGCTGAAAACTCCAATTTGATAATTGCGTCGTCAAAGTATCAAATATCTTATAATAGGTCATAACTTTGTATCTTAATCATTCATAGAACTTGTGAAATTCCATGTTTTTAGCAATAAGATCTCAATTTCCCAATTCGACTCTAACATTAACTCTTAACATTAAGTCGATGTGGGTTTATTAGTTTGGCTGTATTCTCCATTCTAAAAAAAGTTTATCAGGAATCCTAAATAGCAAATGATGAAACTGCTAGTTCAAGAATAAAGACAAAACTTGTGTTTATATCATGTTACTCCGAGCCAACTTTAAATAAAGTGTTGTCTTAGCAGTTAGCACCGTTTCGGGAAAAATATATTTTCGATCATCAAGTTTGAAACCTAAATCAACTTCTTCCCCAAATTGAAAGCTTCTTTAAAATTCCAGATTATTGCCTCCTCAAATCTCCATTTATGAACAAGGTATTTTAACTTTTGATATAATGTTGAATCTAGTGCTGAATACCTCATTAATTTAAGGTCGCTTCACTCCTATTTCCTACTGTTTTATACCCTAAAGAAGAATTTAGTTAGTTGAATATGGTTTTAAAGAGTGACCTGAATTGTGATTACAGCAAAAAAATTTGCTTCTTCTCCTTTAGCTTGTGCTTAGGTTTTAAAGGTAGTAACTTCTATTTATGATCTTGAAGTTCTTCTTATTTTTTTTTTTGCTTTCTTGCTTCCTTTCCTTTTTTTTTCCTTCTTTCCTGTAGCTCTTGTTTCCCCCTTGCGAAATGCTGTTGGAAAGCTTCCTCTTAAAACCAGTGCTGCTGGCTTTTGTCTCTATTGCCAACCGCTCCTCTTCTTTTTTTCTCCTTTTTTAATAGCCGACGGGTCAAGGATAATGGGCTGGCTATTTTAGTTACTCGCTTATTTTAAATGTGCCAAGTCCAATTCTTTAAGTCATTACACACGTTGTGGGTCAGTGGTTATTTGGTCTCTTTTTTATGGTCCTATCCATTCATCTCGACATGAGCTAGTTTTTGGGGTTGAGTTATGCCGTGGTCCAATTCTTTGTCATGGTACCATAGTCAAGTCCATCCCAATTCATGTTTACCTGATGTTGGGCCTCCCATCTTATATTTTCTTCGCTCCAAAGGTTCAACCTTGAGCGCGTGCGACCGGGGTGGGTGGGTAGGGGGTTGGGGTTAAGGTTACCTAGTCTTTATATGATGTGGGCAATTCTTCCCTCATGAGCTAGCTTTAGGATTGAGTTAGACCCAAGGTTGTTTTTTATTTCAGAAGGTGAACAAGAAGATCGAAGGCGTCGGATGATGCTCCATTAGCCTTTATGTGGGTTATATTGAAAGAGAAAAAATAGGATAACATTTGAAGGGGTTGACAATGACTCTGTTAAATTAAAAAAGTAGCCTCTTGTGTATGATATCTCTTTGGTGTACCTATGAGGTTCCTATTTGTGTAGAAGACCGGATATCTTCTGTTGAGAACCATACATTTGTTTAGGTTTCTATACTTTTTGATATTTGACTTGTATTACCGATTTCCCATCATTGATAGTATTGCTTATTAAATTAATGAAAAAGGAGAAATGGTAAATGAAATTGCCTTATTGAATATATGACAGCTGTTTGAATAGTGCTAATTATGTCGTACACATTTTGATTGAACAGCCTCATTAGCTGCAAAGGCACAATATCTTATGCTAATGCCTTCCTTTTCCTCTTCATTCTTATTTGCTGTCCGTTGGTACCTCTGTTCTTCTCTTACCTCTTATTTGTGCATTCATTCATCTGTATATTATATGTTATTTGGCAGTTGATCCTCTTCTAAAATTTACCAAAAATTGATTAGCCTAGTTCTCTTGACATGGCTCATTGTAGATTATAGTGAATCCTCATATTTATGTCTGAATATATTTTCCCAACTGCCAATGTGGTTAGCAGAGAGCGATAGGATGGGGTTGGAAGGCATCTGATATGCAAAATATATGATTATATAAGTATTATGTTTGAGGTCAGGGTCAACTATACATTTGGTGCATAATTTAGAACAAGGACCAGCTCAAAATTGTTTTCTTCTTGTTTCCATTTAACTTCTTAATTTTTCTTATAACTCTCCTTGGCAGACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTGGTAAGTGCCCTATCTATGCGTGCATTGTTACCTTTGGCTTTCATTTGTGGCGCTACACCACCAGGAGTGGAAAAAGAGGGCTTTAATTTTTGTTTCTAATATAATTAATCTAGCAAAGATTTAAAAAGTTTTAAGTAAAGCAACAACATTCAATATGTGCAAGACTGCAAGTTAGTTCATCATATTATTGCTGGTTCACTCCCTTGAACCAAGTCTTCTATTTATCTTCTTCCTCAATGGAGCAGATCTTAATTTTTCTTTCATAGAACCATGTCCAAGGCATCTCGAAATGTGTGCTCTTGGTAACATTTGCTGAAAATTAAGGACCCCATATTGAACTTCTATTGGACATGAGATTTTGTTACAATTGTGTCTCTGTAACTAGTTTTGAGCTGTTCCAATCATTTTCTGCCACTTGTTGGACTAATTGGACCTTGCAATAAATTATGTTGCTACTTTGCACATGCCATAATAAGGGTTAGTGCTTTGACTAAGGGAAGATGATATATGTATATATATATATATGTATATATATATATATTATCTTGTTGTTGCATCAATGGAGAAGTTTATGTGCTATTTTACCTTGTTAATACTAGTTGTAAGAGCAAAAATTACTTTGTGGCCATTTTCTTCAGTGCAAACTGGGAATCAACATGTGGGATGAGGGATTATTGGAGTTATATATCAGCCTTCAACCACTTCCCCTTGATGTGAAATTTTCAGTCCCCTTTCTTTGTGAATAATGGAGTTCCAGAGAATGTACGATGTTCGGAGACTTGAACCAAGAGGTGCATCCTTAGATTACGTTAGGGCAATTAAATACATGTACTATGGAGCAAGGAAACTCAGATCACTTCTCGTTGTGATGGGGTTGCACCAGGGATCGACACATAGCCCATTTCTAGTTACTAACACGACTTATCCTAGGAAAAGTCCATGATATATGCTCTTTGCAGATGACAATGTGGTAATGAGACCAGGACAGAGTTAACAATAGGTGCCTTAACAATATATTGGAAATTTGAGGACAGACGTTGGAGTATAAAGAGTCTGGGTTGAGTAGGACTTAGACAAAATACTTGAAGTTCAAGTTCAATGACGTAAAACACATGGTAGATGTGGAAGTAAGGATTGAAACAAGCAGGGATCAATGATTCAGGAAAATAAGGAGATAGACGAAGATGTTACACATTGTATTGGAGCAGGTGGATGACGTTCACTGTCTTTTATGATAAGATTGTACCACCAAAGCCTTAAGGTAGGTATTACAAAGTGGTGGTCAGACTAGCTATGGACAGAGTGTTGACTAGACAAGAACTCGCATGTATAGAAGATGAGAGTAGTAGAAATGAGAATGTTGAGTTGGATGTTTGGGCATACTAAGATTGAGATTAGGAATGAAGCTATACGCGACATTGTGGGATAGGGCGCCTTGGTGAACAAGATGAGGCATGTGAAGCTGAGATGGTTCGAACATGTGAAGGAAACATGCATGAATACCCCGATTAGGAGCGAGAGGTTGGCTATAGAGGATGTAACATGATGTAGAGGTAGACCGAGAAGTCTCAAAAGAAATGATTAGATAGGACATGACTCATGCAGCTTACCTTTATGAGGACATGACCTTGGCCCTAGATAGGAAGATATGGCGGTCAAAAATTAGGGTAGAAGGTCAGTAGGTCGAACATTGTCTTGTTCTCTCTTACTGTCTTATTCGATTTTAGTATTACATGATTTTTCATTTGCTAACAGCTACCGTTATTTTAAATTTTTTGGTGTTGCTATTGCTCTCTTTATTGATTTCAGCATGACTTTGATTTTAGGATTACATTATTGTATTTGCTTTGCATACTTGTTTTTTATATGCTTTACCTGTGTCGTTTATCTGGTAGATACAACCTCTCTACCTTTCAAAAGGTAGGGGTAAGGCCGTGTACACACCATCCTCCTCAGACCCCACTTGTGGGATTATAACTGGCCCAGTTGAGCTGGGTATGTTTTTATTGGATCTCCAGATGAAGACCAGACAATACTTTTCTTGACAAATTGCTTTACGTGGAAGGCTGCTGATACTGCATTAGTTGCTTACATTTGGTTTTCACTAGACATCTTTTTCATATTATACATAAATATGCAGGCTACACTAGAAACTACTATATAGAATTGGATAATCCGTAGTGAATAAATTTATCTTGGGTCTGTTTTGTTTTCTCACTCCATGTAGCATGGGCACTTTATTAGATACATATTCAAGTATAGTTTAAGGCTCCACCTGCAAGGACTTTTTTAACTTTAACTTCTTCCAATTTTTGCAAAGTGGACTATTTGTTAAATCAAAAGTAGATATATATTAGCAGCTTCAAAAAAAAAAAGTAGATGTATATTAGAATCTAGCTATTAGTAGTCCTTTGTAATTATAATGATGAACAACAATATATTTTCCTAATCATATGTTAGTCGACTTACTAGTTAATTAACTAAATAGTTCTTATTGTATCCTCAGGCTACGTTCCTTTGAGGTCTACTTTGATATATAGGGTGAAATGGTAGGGCAAAGTGACAAGACACTGAAGAAAACAGCTATAAGAAGAAAAGATATGAAAGCAGATGAAGAATTAGTTCTCATAAACCAGTTAAAAAAAAGTCATGAGATTACCATTAAGTAGCTTATCTAGTAAAATTTGAGTCAGGGAGCAGGGAGCTGAACTATACACCACAGATAAAAATCAGTTCATAAAAAATTCAGCCAATTGGTTTATGAGAAAACTAATTCTTAAATAGTATGTAATAAATTTCACTAGTTCAAGAAATCCATTCTCACTTGCTGTCTATTTTTTCAGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACA</genome_strand>
        <mrna_strand>GGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E245676" ref_strand="+" ref_description="SGN-E245676 [cLEF-48-E19]">
      <seq>aaaacgatcagaaattggagggtcaagtgaatccctctggtgtggagactagcaacaaagaggatgcaactgataatcagaaaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcgtttgagcagtacatcaccatcttcagattctcaactgaggaagaccccctataatgtggttcctctcgcttcacgatctgttggagttactgttagtccttcacggtttgcacctccgggacagcaagggcaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94749" stop="104276"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95049" g_stop="95095" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="47" r_length="47" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95096" i_stop="100536" i_length="5441">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100537" g_stop="100644" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="48" r_stop="155" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100781" g_stop="101056" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="431" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103900" g_stop="103976" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="508" r_length="77" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E245676" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E245676" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95049" e_stop="95095"/>
          <exon e_start="100537" e_stop="100644"/>
          <exon e_start="100781" e_stop="101056"/>
          <exon e_start="103900" e_stop="103976"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAGGTATTGAATTGCAATTATTGATCTATTTTGTTTGTATGGTGTTATCCATGGATTTTGCTGGCTTTAGTTATGATTCGCTTATGCATCTTTCTGTTTTCTCTTAGTAAGGAAGGGATCCCAGCCAATTCAGGGTAGAAGTTAAGGGTGTGTATACCTTACGAAGCTTTTTACCCTTTTTGCGATGAGGCTGCTCCAAGTCTGGACTCTCCAACCATGACCTACAGCTTTTCCTCATTTTTGTTTATTATGTTTAGGAATTCTTAATATATGTCAATAAAAAAATATGTATCAGATGATTTGTAAGAACTAATACTGTTTATTTCTATGGAAGAGCGTAATGATATATGTGTAGTTGGTTTAAGACTAGCATTTTTTTAGCAGAAGCGTCATGTACTGATTAGAGATGAGGAGGTATATTTGCCTGAGGGTTGGGATACTTACATTAGATCTGTTCGGGGGATACTGCTTTCAGAAATTAAGGATAAATGGAGAGACAGTGAATGCTACATGCTACATTGGATTTATGGAGATAGGGAGAAGAGTCGTTCTTTCCGTATAGGGTGCCCATGAAGGTGTGTTTCCTTGCTTGATTAGGGGCGGGTGAAGTGATATTGATGGCTGAGAACATGAGATAGAAAAGGAGCACCTATGTTGGTGTTACATCTACAGATGTTTGGGTGAATACGTAGACCTGTCTCCTGTTACATTTTCAGGTGGTTGTGCACTCATTGTTGGCAATTCTGAATCGTTTGGTGGATACATGAGTATTTGTCAGAGTTTCTCTATATCGGAAGCAATCTGTAATTCCAGACTTTTCACCTACTCGTTTAACCGGAACCCAACATACTAAATTTAAGAGAATATCAAATATGAAGTCGGTCGCTTTCACAAAACTTTAGACGTTCCCAGTTACTTCTTTACTGACACAAGCCAAAACCAAATTTACAAGACCGACACAAGGAGGAAAACTCTAGGATTTAAGCAAAATAATATACTATATTAGTCTAAATAGAATGATGTCCCATGCGAGGTAAGTGCGGAGCTTGTTAGCTCTGTGACTCTGTATGAGTCAAAGTGTCACCCTTAAATGAATTATCTTTGGGGGGGGGGGAGGAGTTGGATTCAGTTGCACTAATTGCGTGAGTAATAACATCAACCATACATTTTATATGGAGCAGGTATACATAAGGAATCATGCAATTTATAAGATCCTCAACTATGTCCTACTTAAATCAATATAGCCTAAGTTGCTCGGGTGTGGTTTCCGATAATGCGGACCTAGAGCTCAAATCCTATATGATCTAAATTTTTAGATTTGGGTATATGGATCCATGTATGGATATGGGAGCGGGGGTTCGGCTAAAAATAATTCAAATAGCTAAAAATAGAGTTATAAAGCCTAAGTTATGAGATATTATATGGACGTCTTGAGATGAAAATGTTGATCAAGAGGAGAAAGAGATAAAAGGAAAAAGAGTGACAATAGAAATTAATATATCCAAGGTATTTCATTTCTTCAATTTCACCTTAATTTTTGTTTTGCGCATATAAATCATTGAATCTGTCCAAATTTCTCCCTCAAATTTGGTTTAAGTATCCCAAATTGGTTGACCATATCGTTTACGGATGCCACACCATCACTCACACCCGTTTCGTGTCGACATGGGTGCGAGAACAAAGGCGAAGAGTCCGTGCAACTTAGGATATAACCATTGTTGTGAAAAGCGCAGAAAAAGCGCGCTTCAAAGCGACACGACCCTTGTGCGCTTTTTTATCTTGAGGCGAGGCGATCTGAAGAAAACTCTCGCTTCAGATGAAGAAGCGACCCTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAAAAGCGACAATTAGTTTTTTTTTAATAAAAAAATTAGGTTTTTTTTTATAAAAAAATCTGAAATATAACCTTCTCTCTCCTCACGACTCTTTTCCTTCTTTCTCTTCTCGCAACTCTTCTTTCACAACACTTCTTTCCCTTCTTTCTCTCCTCGCAGCTCTTCTTTCACAATACTTCTTTCCCTTCTTTCTCTCCTGACGATCTCGACTGAGTCTGCCTCTTTCTTCAACCTCGACTGTAGGTAACTTTTTGTTCATCTCTTTTTTAGCTAATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATCAATCTTTGCCTGTGCTTCATCTCTTCATCTCTCTGAGTTTCAACTACTCTAGTTTTTTCTTCTTCTTCTCTTCTTTTCTTCATCTCTGCTGCTTGCTCTGTTTCTAATTACTGACTGCTGCCTCCTCTGTTTTTTTTTTCTTCAATTCTTTTGCTTTTTTTTATTTTTTTATTTTGTGATCAGTCTAGCAGCCTTGTTGAAGAATAGGAGTTTGAATCTTTGTGACTTAATTATATTTTTGATTTTTTGCTTTATATGTTATGACTTATGAGTATTTTTGCCTATGTAATTTCTTTCAATCTAAGACTATATTACCTCTATTTAGTTATTTAATATTTTTTATTTTTATACTAAATGTCGCTTTTTTTTTCTAAAAAAAAGCGCGCTTCGCTTCTGTGAAGCAAGCCTTCGTAGCTTTTTTCCGCTTCTCGCTTCCCAAAACACGGATATAACAATTCGTGTGTGAAATAAATGATCAAAATGGATGAAAATATACATTTTAGATCCATTTATCCTTTTCTACTTAATATCCTTATATAGTGGGAGATACATTAACCAAAATCGATGTAAATTTGGACACCACAAGTCTATCATGGCTTTCTGACTATCCCATCAGCTAGGTTCCCTTCTAGAGGGCTCAAGTGTGATATTCATATTACTGGTTCTTTCCTGCTAGTATAGGAAAATATTATACAAGGTGCGACCATGTCTAGTGACCTCAACGTTAGATGATAGTGATCTAGCAAAGCTTACTCCTGAAGTATCTTCCTTACAACAACAACATACCCAGTATGATCCCACATAGTTAGGGTCTAGGGAAGGTAGAGTTTACACAGAACTTAACCCTACCTCAGAGGTATTGAAGTATCTTCCATATAAGACAAAATGTTGTCATATTTTTTTGTGTTAAGAATTTATTCCAATAGTATATATAGCAACTAGGTTTAAGGATAATCAATATGTCAAAGTCATTATAAAGATGATTTTGTACATTTCCAATTGTGGACCATACTTTCACTTGTTCGTGTGCAGGTAATCGATTTGTTTTTTATAAATCGTTTCAATGCAAGAATACAAACTCAAAATTATGCTATAATTGAAATTCAACTATGAAAGAATTATAACTCATAGTACTATTGCTGAAAACTCCAATTTGATAATTGCGTCGTCAAAGTATCAAATATCTTATAATAGGTCATAACTTTGTATCTTAATCATTCATAGAACTTGTGAAATTCCATGTTTTTAGCAATAAGATCTCAATTTCCCAATTCGACTCTAACATTAACTCTTAACATTAAGTCGATGTGGGTTTATTAGTTTGGCTGTATTCTCCATTCTAAAAAAAGTTTATCAGGAATCCTAAATAGCAAATGATGAAACTGCTAGTTCAAGAATAAAGACAAAACTTGTGTTTATATCATGTTACTCCGAGCCAACTTTAAATAAAGTGTTGTCTTAGCAGTTAGCACCGTTTCGGGAAAAATATATTTTCGATCATCAAGTTTGAAACCTAAATCAACTTCTTCCCCAAATTGAAAGCTTCTTTAAAATTCCAGATTATTGCCTCCTCAAATCTCCATTTATGAACAAGGTATTTTAACTTTTGATATAATGTTGAATCTAGTGCTGAATACCTCATTAATTTAAGGTCGCTTCACTCCTATTTCCTACTGTTTTATACCCTAAAGAAGAATTTAGTTAGTTGAATATGGTTTTAAAGAGTGACCTGAATTGTGATTACAGCAAAAAAATTTGCTTCTTCTCCTTTAGCTTGTGCTTAGGTTTTAAAGGTAGTAACTTCTATTTATGATCTTGAAGTTCTTCTTATTTTTTTTTTTGCTTTCTTGCTTCCTTTCCTTTTTTTTTCCTTCTTTCCTGTAGCTCTTGTTTCCCCCTTGCGAAATGCTGTTGGAAAGCTTCCTCTTAAAACCAGTGCTGCTGGCTTTTGTCTCTATTGCCAACCGCTCCTCTTCTTTTTTTCTCCTTTTTTAATAGCCGACGGGTCAAGGATAATGGGCTGGCTATTTTAGTTACTCGCTTATTTTAAATGTGCCAAGTCCAATTCTTTAAGTCATTACACACGTTGTGGGTCAGTGGTTATTTGGTCTCTTTTTTATGGTCCTATCCATTCATCTCGACATGAGCTAGTTTTTGGGGTTGAGTTATGCCGTGGTCCAATTCTTTGTCATGGTACCATAGTCAAGTCCATCCCAATTCATGTTTACCTGATGTTGGGCCTCCCATCTTATATTTTCTTCGCTCCAAAGGTTCAACCTTGAGCGCGTGCGACCGGGGTGGGTGGGTAGGGGGTTGGGGTTAAGGTTACCTAGTCTTTATATGATGTGGGCAATTCTTCCCTCATGAGCTAGCTTTAGGATTGAGTTAGACCCAAGGTTGTTTTTTATTTCAGAAGGTGAACAAGAAGATCGAAGGCGTCGGATGATGCTCCATTAGCCTTTATGTGGGTTATATTGAAAGAGAAAAAATAGGATAACATTTGAAGGGGTTGACAATGACTCTGTTAAATTAAAAAAGTAGCCTCTTGTGTATGATATCTCTTTGGTGTACCTATGAGGTTCCTATTTGTGTAGAAGACCGGATATCTTCTGTTGAGAACCATACATTTGTTTAGGTTTCTATACTTTTTGATATTTGACTTGTATTACCGATTTCCCATCATTGATAGTATTGCTTATTAAATTAATGAAAAAGGAGAAATGGTAAATGAAATTGCCTTATTGAATATATGACAGCTGTTTGAATAGTGCTAATTATGTCGTACACATTTTGATTGAACAGCCTCATTAGCTGCAAAGGCACAATATCTTATGCTAATGCCTTCCTTTTCCTCTTCATTCTTATTTGCTGTCCGTTGGTACCTCTGTTCTTCTCTTACCTCTTATTTGTGCATTCATTCATCTGTATATTATATGTTATTTGGCAGTTGATCCTCTTCTAAAATTTACCAAAAATTGATTAGCCTAGTTCTCTTGACATGGCTCATTGTAGATTATAGTGAATCCTCATATTTATGTCTGAATATATTTTCCCAACTGCCAATGTGGTTAGCAGAGAGCGATAGGATGGGGTTGGAAGGCATCTGATATGCAAAATATATGATTATATAAGTATTATGTTTGAGGTCAGGGTCAACTATACATTTGGTGCATAATTTAGAACAAGGACCAGCTCAAAATTGTTTTCTTCTTGTTTCCATTTAACTTCTTAATTTTTCTTATAACTCTCCTTGGCAGACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTGGTAAGTGCCCTATCTATGCGTGCATTGTTACCTTTGGCTTTCATTTGTGGCGCTACACCACCAGGAGTGGAAAAAGAGGGCTTTAATTTTTGTTTCTAATATAATTAATCTAGCAAAGATTTAAAAAGTTTTAAGTAAAGCAACAACATTCAATATGTGCAAGACTGCAAGTTAGTTCATCATATTATTGCTGGTTCACTCCCTTGAACCAAGTCTTCTATTTATCTTCTTCCTCAATGGAGCAGATCTTAATTTTTCTTTCATAGAACCATGTCCAAGGCATCTCGAAATGTGTGCTCTTGGTAACATTTGCTGAAAATTAAGGACCCCATATTGAACTTCTATTGGACATGAGATTTTGTTACAATTGTGTCTCTGTAACTAGTTTTGAGCTGTTCCAATCATTTTCTGCCACTTGTTGGACTAATTGGACCTTGCAATAAATTATGTTGCTACTTTGCACATGCCATAATAAGGGTTAGTGCTTTGACTAAGGGAAGATGATATATGTATATATATATATATGTATATATATATATATTATCTTGTTGTTGCATCAATGGAGAAGTTTATGTGCTATTTTACCTTGTTAATACTAGTTGTAAGAGCAAAAATTACTTTGTGGCCATTTTCTTCAGTGCAAACTGGGAATCAACATGTGGGATGAGGGATTATTGGAGTTATATATCAGCCTTCAACCACTTCCCCTTGATGTGAAATTTTCAGTCCCCTTTCTTTGTGAATAATGGAGTTCCAGAGAATGTACGATGTTCGGAGACTTGAACCAAGAGGTGCATCCTTAGATTACGTTAGGGCAATTAAATACATGTACTATGGAGCAAGGAAACTCAGATCACTTCTCGTTGTGATGGGGTTGCACCAGGGATCGACACATAGCCCATTTCTAGTTACTAACACGACTTATCCTAGGAAAAGTCCATGATATATGCTCTTTGCAGATGACAATGTGGTAATGAGACCAGGACAGAGTTAACAATAGGTGCCTTAACAATATATTGGAAATTTGAGGACAGACGTTGGAGTATAAAGAGTCTGGGTTGAGTAGGACTTAGACAAAATACTTGAAGTTCAAGTTCAATGACGTAAAACACATGGTAGATGTGGAAGTAAGGATTGAAACAAGCAGGGATCAATGATTCAGGAAAATAAGGAGATAGACGAAGATGTTACACATTGTATTGGAGCAGGTGGATGACGTTCACTGTCTTTTATGATAAGATTGTACCACCAAAGCCTTAAGGTAGGTATTACAAAGTGGTGGTCAGACTAGCTATGGACAGAGTGTTGACTAGACAAGAACTCGCATGTATAGAAGATGAGAGTAGTAGAAATGAGAATGTTGAGTTGGATGTTTGGGCATACTAAGATTGAGATTAGGAATGAAGCTATACGCGACATTGTGGGATAGGGCGCCTTGGTGAACAAGATGAGGCATGTGAAGCTGAGATGGTTCGAACATGTGAAGGAAACATGCATGAATACCCCGATTAGGAGCGAGAGGTTGGCTATAGAGGATGTAACATGATGTAGAGGTAGACCGAGAAGTCTCAAAAGAAATGATTAGATAGGACATGACTCATGCAGCTTACCTTTATGAGGACATGACCTTGGCCCTAGATAGGAAGATATGGCGGTCAAAAATTAGGGTAGAAGGTCAGTAGGTCGAACATTGTCTTGTTCTCTCTTACTGTCTTATTCGATTTTAGTATTACATGATTTTTCATTTGCTAACAGCTACCGTTATTTTAAATTTTTTGGTGTTGCTATTGCTCTCTTTATTGATTTCAGCATGACTTTGATTTTAGGATTACATTATTGTATTTGCTTTGCATACTTGTTTTTTATATGCTTTACCTGTGTCGTTTATCTGGTAGATACAACCTCTCTACCTTTCAAAAGGTAGGGGTAAGGCCGTGTACACACCATCCTCCTCAGACCCCACTTGTGGGATTATAACTGGCCCAGTTGAGCTGGGTATGTTTTTATTGGATCTCCAGATGAAGACCAGACAATACTTTTCTTGACAAATTGCTTTACGTGGAAGGCTGCTGATACTGCATTAGTTGCTTACATTTGGTTTTCACTAGACATCTTTTTCATATTATACATAAATATGCAGGCTACACTAGAAACTACTATATAGAATTGGATAATCCGTAGTGAATAAATTTATCTTGGGTCTGTTTTGTTTTCTCACTCCATGTAGCATGGGCACTTTATTAGATACATATTCAAGTATAGTTTAAGGCTCCACCTGCAAGGACTTTTTTAACTTTAACTTCTTCCAATTTTTGCAAAGTGGACTATTTGTTAAATCAAAAGTAGATATATATTAGCAGCTTCAAAAAAAAAAAGTAGATGTATATTAGAATCTAGCTATTAGTAGTCCTTTGTAATTATAATGATGAACAACAATATATTTTCCTAATCATATGTTAGTCGACTTACTAGTTAATTAACTAAATAGTTCTTATTGTATCCTCAGGCTACGTTCCTTTGAGGTCTACTTTGATATATAGGGTGAAATGGTAGGGCAAAGTGACAAGACACTGAAGAAAACAGCTATAAGAAGAAAAGATATGAAAGCAGATGAAGAATTAGTTCTCATAAACCAGTTAAAAAAAAGTCATGAGATTACCATTAAGTAGCTTATCTAGTAAAATTTGAGTCAGGGAGCAGGGAGCTGAACTATACACCACAGATAAAAATCAGTTCATAAAAAATTCAGCCAATTGGTTTATGAGAAAACTAATTCTTAAATAGTATGTAATAAATTTCACTAGTTCAAGAAATCCATTCTCACTTGCTGTCTATTTTTTCAGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACC</genome_strand>
        <mrna_strand>AAAACGATCAGAAATTGGAGGGTCAAGTGAATCCCTCTGGTGTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E705978" ref_strand="+" ref_description="SGN-E705978 [FA28CF09]">
      <seq>gactagcaacaaagaggatgcaactgataatcagaaaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcgtttgagcagtacatcaccatcttcagattctcaactgaggaagaccccctataatgtggttcctctcgcttcacgatctgttggagttactgttagtccttcacggtttgcacctccgggacagcaagggcaaccttcaagtctccccccagtgtccttatctggaacgaacattgttgcctcctctccttctcctgtagcatcaggcggcacttcagcatttcgagatcggtttgcaagcccatgaaaatgggagttgtgctagttgttactcctcctgtcagctggctttctgttctctcaacctcattctaagtttcaactggctaatctatgaagctgtaaattattctgtagttccaaattggtcattcgctgtaacggtagcagtgacgatgcagtgtctttaagtctggtgccttctagttggaagtatagtatttccgttaatctggctgggtgtgtgtccatccgatacttgtgaagtttcccatggtcatgtttttagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="100236" stop="104650"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100536" g_stop="100644" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="109" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100781" g_stop="101056" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="385" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103900" g_stop="104350" g_length="451"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="836" r_length="451" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E705978" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>836</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E705978" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100536" e_stop="100644"/>
          <exon e_start="100781" e_stop="101056"/>
          <exon e_start="103900" e_stop="104350"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTGGTAAGTGCCCTATCTATGCGTGCATTGTTACCTTTGGCTTTCATTTGTGGCGCTACACCACCAGGAGTGGAAAAAGAGGGCTTTAATTTTTGTTTCTAATATAATTAATCTAGCAAAGATTTAAAAAGTTTTAAGTAAAGCAACAACATTCAATATGTGCAAGACTGCAAGTTAGTTCATCATATTATTGCTGGTTCACTCCCTTGAACCAAGTCTTCTATTTATCTTCTTCCTCAATGGAGCAGATCTTAATTTTTCTTTCATAGAACCATGTCCAAGGCATCTCGAAATGTGTGCTCTTGGTAACATTTGCTGAAAATTAAGGACCCCATATTGAACTTCTATTGGACATGAGATTTTGTTACAATTGTGTCTCTGTAACTAGTTTTGAGCTGTTCCAATCATTTTCTGCCACTTGTTGGACTAATTGGACCTTGCAATAAATTATGTTGCTACTTTGCACATGCCATAATAAGGGTTAGTGCTTTGACTAAGGGAAGATGATATATGTATATATATATATATGTATATATATATATATTATCTTGTTGTTGCATCAATGGAGAAGTTTATGTGCTATTTTACCTTGTTAATACTAGTTGTAAGAGCAAAAATTACTTTGTGGCCATTTTCTTCAGTGCAAACTGGGAATCAACATGTGGGATGAGGGATTATTGGAGTTATATATCAGCCTTCAACCACTTCCCCTTGATGTGAAATTTTCAGTCCCCTTTCTTTGTGAATAATGGAGTTCCAGAGAATGTACGATGTTCGGAGACTTGAACCAAGAGGTGCATCCTTAGATTACGTTAGGGCAATTAAATACATGTACTATGGAGCAAGGAAACTCAGATCACTTCTCGTTGTGATGGGGTTGCACCAGGGATCGACACATAGCCCATTTCTAGTTACTAACACGACTTATCCTAGGAAAAGTCCATGATATATGCTCTTTGCAGATGACAATGTGGTAATGAGACCAGGACAGAGTTAACAATAGGTGCCTTAACAATATATTGGAAATTTGAGGACAGACGTTGGAGTATAAAGAGTCTGGGTTGAGTAGGACTTAGACAAAATACTTGAAGTTCAAGTTCAATGACGTAAAACACATGGTAGATGTGGAAGTAAGGATTGAAACAAGCAGGGATCAATGATTCAGGAAAATAAGGAGATAGACGAAGATGTTACACATTGTATTGGAGCAGGTGGATGACGTTCACTGTCTTTTATGATAAGATTGTACCACCAAAGCCTTAAGGTAGGTATTACAAAGTGGTGGTCAGACTAGCTATGGACAGAGTGTTGACTAGACAAGAACTCGCATGTATAGAAGATGAGAGTAGTAGAAATGAGAATGTTGAGTTGGATGTTTGGGCATACTAAGATTGAGATTAGGAATGAAGCTATACGCGACATTGTGGGATAGGGCGCCTTGGTGAACAAGATGAGGCATGTGAAGCTGAGATGGTTCGAACATGTGAAGGAAACATGCATGAATACCCCGATTAGGAGCGAGAGGTTGGCTATAGAGGATGTAACATGATGTAGAGGTAGACCGAGAAGTCTCAAAAGAAATGATTAGATAGGACATGACTCATGCAGCTTACCTTTATGAGGACATGACCTTGGCCCTAGATAGGAAGATATGGCGGTCAAAAATTAGGGTAGAAGGTCAGTAGGTCGAACATTGTCTTGTTCTCTCTTACTGTCTTATTCGATTTTAGTATTACATGATTTTTCATTTGCTAACAGCTACCGTTATTTTAAATTTTTTGGTGTTGCTATTGCTCTCTTTATTGATTTCAGCATGACTTTGATTTTAGGATTACATTATTGTATTTGCTTTGCATACTTGTTTTTTATATGCTTTACCTGTGTCGTTTATCTGGTAGATACAACCTCTCTACCTTTCAAAAGGTAGGGGTAAGGCCGTGTACACACCATCCTCCTCAGACCCCACTTGTGGGATTATAACTGGCCCAGTTGAGCTGGGTATGTTTTTATTGGATCTCCAGATGAAGACCAGACAATACTTTTCTTGACAAATTGCTTTACGTGGAAGGCTGCTGATACTGCATTAGTTGCTTACATTTGGTTTTCACTAGACATCTTTTTCATATTATACATAAATATGCAGGCTACACTAGAAACTACTATATAGAATTGGATAATCCGTAGTGAATAAATTTATCTTGGGTCTGTTTTGTTTTCTCACTCCATGTAGCATGGGCACTTTATTAGATACATATTCAAGTATAGTTTAAGGCTCCACCTGCAAGGACTTTTTTAACTTTAACTTCTTCCAATTTTTGCAAAGTGGACTATTTGTTAAATCAAAAGTAGATATATATTAGCAGCTTCAAAAAAAAAAAGTAGATGTATATTAGAATCTAGCTATTAGTAGTCCTTTGTAATTATAATGATGAACAACAATATATTTTCCTAATCATATGTTAGTCGACTTACTAGTTAATTAACTAAATAGTTCTTATTGTATCCTCAGGCTACGTTCCTTTGAGGTCTACTTTGATATATAGGGTGAAATGGTAGGGCAAAGTGACAAGACACTGAAGAAAACAGCTATAAGAAGAAAAGATATGAAAGCAGATGAAGAATTAGTTCTCATAAACCAGTTAAAAAAAAGTCATGAGATTACCATTAAGTAGCTTATCTAGTAAAATTTGAGTCAGGGAGCAGGGAGCTGAACTATACACCACAGATAAAAATCAGTTCATAAAAAATTCAGCCAATTGGTTTATGAGAAAACTAATTCTTAAATAGTATGTAATAAATTTCACTAGTTCAAGAAATCCATTCTCACTTGCTGTCTATTTTTTCAGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTTAAGTCTGGTGCCTTCTAGTTGGAAGTATAGTATTTCCGTTAATCTGGCTGGGTGTGTGTCCATCCGATACTTGTGAAGTTTCCCATGGTCATGTTTTTAGT</genome_strand>
        <mrna_strand>GACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTTAAGTCTGGTGCCTTCTAGTTGGAAGTATAGTATTTCCGTTAATCTGGCTGGGTGTGTGTCCATCCGATACTTGTGAAGTTTCCCATGGTCATGTTTTTAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E301597" ref_strand="+" ref_description="SGN-E301597 [cLEW-23-L12]">
      <seq>ttactaaatcagaaaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcgtttgagcagtacatcaccatcttcagattctcaactgaggaaaaccccctataatgaggtttctctcgcttcacgatctgttggagttactgttagtccttcacggtttgcaccttcgggacagcaagggcaaccttcaagtcttcccccagtgtccttatctggaacgaacatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="100258" stop="104316"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100556" g_stop="100644" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="87" r_length="87" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100781" g_stop="101056" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="363" r_length="276" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843">
            <donor d_prob="0.934" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103900" g_stop="104016" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="480" r_length="117" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E301597" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>482</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E301597" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100556" e_stop="100644"/>
          <exon e_start="100781" e_stop="101056"/>
          <exon e_start="103900" e_stop="104016"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTGGTAAGTGCCCTATCTATGCGTGCATTGTTACCTTTGGCTTTCATTTGTGGCGCTACACCACCAGGAGTGGAAAAAGAGGGCTTTAATTTTTGTTTCTAATATAATTAATCTAGCAAAGATTTAAAAAGTTTTAAGTAAAGCAACAACATTCAATATGTGCAAGACTGCAAGTTAGTTCATCATATTATTGCTGGTTCACTCCCTTGAACCAAGTCTTCTATTTATCTTCTTCCTCAATGGAGCAGATCTTAATTTTTCTTTCATAGAACCATGTCCAAGGCATCTCGAAATGTGTGCTCTTGGTAACATTTGCTGAAAATTAAGGACCCCATATTGAACTTCTATTGGACATGAGATTTTGTTACAATTGTGTCTCTGTAACTAGTTTTGAGCTGTTCCAATCATTTTCTGCCACTTGTTGGACTAATTGGACCTTGCAATAAATTATGTTGCTACTTTGCACATGCCATAATAAGGGTTAGTGCTTTGACTAAGGGAAGATGATATATGTATATATATATATATGTATATATATATATATTATCTTGTTGTTGCATCAATGGAGAAGTTTATGTGCTATTTTACCTTGTTAATACTAGTTGTAAGAGCAAAAATTACTTTGTGGCCATTTTCTTCAGTGCAAACTGGGAATCAACATGTGGGATGAGGGATTATTGGAGTTATATATCAGCCTTCAACCACTTCCCCTTGATGTGAAATTTTCAGTCCCCTTTCTTTGTGAATAATGGAGTTCCAGAGAATGTACGATGTTCGGAGACTTGAACCAAGAGGTGCATCCTTAGATTACGTTAGGGCAATTAAATACATGTACTATGGAGCAAGGAAACTCAGATCACTTCTCGTTGTGATGGGGTTGCACCAGGGATCGACACATAGCCCATTTCTAGTTACTAACACGACTTATCCTAGGAAAAGTCCATGATATATGCTCTTTGCAGATGACAATGTGGTAATGAGACCAGGACAGAGTTAACAATAGGTGCCTTAACAATATATTGGAAATTTGAGGACAGACGTTGGAGTATAAAGAGTCTGGGTTGAGTAGGACTTAGACAAAATACTTGAAGTTCAAGTTCAATGACGTAAAACACATGGTAGATGTGGAAGTAAGGATTGAAACAAGCAGGGATCAATGATTCAGGAAAATAAGGAGATAGACGAAGATGTTACACATTGTATTGGAGCAGGTGGATGACGTTCACTGTCTTTTATGATAAGATTGTACCACCAAAGCCTTAAGGTAGGTATTACAAAGTGGTGGTCAGACTAGCTATGGACAGAGTGTTGACTAGACAAGAACTCGCATGTATAGAAGATGAGAGTAGTAGAAATGAGAATGTTGAGTTGGATGTTTGGGCATACTAAGATTGAGATTAGGAATGAAGCTATACGCGACATTGTGGGATAGGGCGCCTTGGTGAACAAGATGAGGCATGTGAAGCTGAGATGGTTCGAACATGTGAAGGAAACATGCATGAATACCCCGATTAGGAGCGAGAGGTTGGCTATAGAGGATGTAACATGATGTAGAGGTAGACCGAGAAGTCTCAAAAGAAATGATTAGATAGGACATGACTCATGCAGCTTACCTTTATGAGGACATGACCTTGGCCCTAGATAGGAAGATATGGCGGTCAAAAATTAGGGTAGAAGGTCAGTAGGTCGAACATTGTCTTGTTCTCTCTTACTGTCTTATTCGATTTTAGTATTACATGATTTTTCATTTGCTAACAGCTACCGTTATTTTAAATTTTTTGGTGTTGCTATTGCTCTCTTTATTGATTTCAGCATGACTTTGATTTTAGGATTACATTATTGTATTTGCTTTGCATACTTGTTTTTTATATGCTTTACCTGTGTCGTTTATCTGGTAGATACAACCTCTCTACCTTTCAAAAGGTAGGGGTAAGGCCGTGTACACACCATCCTCCTCAGACCCCACTTGTGGGATTATAACTGGCCCAGTTGAGCTGGGTATGTTTTTATTGGATCTCCAGATGAAGACCAGACAATACTTTTCTTGACAAATTGCTTTACGTGGAAGGCTGCTGATACTGCATTAGTTGCTTACATTTGGTTTTCACTAGACATCTTTTTCATATTATACATAAATATGCAGGCTACACTAGAAACTACTATATAGAATTGGATAATCCGTAGTGAATAAATTTATCTTGGGTCTGTTTTGTTTTCTCACTCCATGTAGCATGGGCACTTTATTAGATACATATTCAAGTATAGTTTAAGGCTCCACCTGCAAGGACTTTTTTAACTTTAACTTCTTCCAATTTTTGCAAAGTGGACTATTTGTTAAATCAAAAGTAGATATATATTAGCAGCTTCAAAAAAAAAAAGTAGATGTATATTAGAATCTAGCTATTAGTAGTCCTTTGTAATTATAATGATGAACAACAATATATTTTCCTAATCATATGTTAGTCGACTTACTAGTTAATTAACTAAATAGTTCTTATTGTATCCTCAGGCTACGTTCCTTTGAGGTCTACTTTGATATATAGGGTGAAATGGTAGGGCAAAGTGACAAGACACTGAAGAAAACAGCTATAAGAAGAAAAGATATGAAAGCAGATGAAGAATTAGTTCTCATAAACCAGTTAAAAAAAAGTCATGAGATTACCATTAAGTAGCTTATCTAGTAAAATTTGAGTCAGGGAGCAGGGAGCTGAACTATACACCACAGATAAAAATCAGTTCATAAAAAATTCAGCCAATTGGTTTATGAGAAAACTAATTCTTAAATAGTATGTAATAAATTTCACTAGTTCAAGAAATCCATTCTCACTTGCTGTCTATTTTTTCAGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATT</genome_strand>
        <mrna_strand>TTACT-A-AATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAAACCCCCTATAATGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTTCGGGACAGCAAGGGCAACCTTCAAGTCTTCCCCCAGTGTCCTTATCTGGAACGAACATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E285046" ref_strand="+" ref_description="SGN-E285046 [cLER-19-P13]">
      <seq>tgataatcagaaaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccactttaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcgtttgagcagtacatcaccatcttcagattctcaactgaggaagaccccctataatgtggttcctctcgcttcacgatctgttggagttactgttagtccttcacggtttgcacctccgggacagcaagggcaaccttcaagtctccccccagtgtccttatctggaacgaacattgttgcctcctctccttctcctgtagcatcaggcggcacttcagcatttcgagatcggtttgcaagcccatgaaaatgggagttgtgctagttgttactcctcctgtcagctggctttctgttctctcaaccttattctaagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="100260" stop="104459"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100560" g_stop="100644" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100781" g_stop="101056" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="361" r_length="276" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103900" g_stop="104159" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="621" r_length="260" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E285046" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>621</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E285046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100560" e_stop="100644"/>
          <exon e_start="100781" e_stop="101056"/>
          <exon e_start="103900" e_stop="104159"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTGGTAAGTGCCCTATCTATGCGTGCATTGTTACCTTTGGCTTTCATTTGTGGCGCTACACCACCAGGAGTGGAAAAAGAGGGCTTTAATTTTTGTTTCTAATATAATTAATCTAGCAAAGATTTAAAAAGTTTTAAGTAAAGCAACAACATTCAATATGTGCAAGACTGCAAGTTAGTTCATCATATTATTGCTGGTTCACTCCCTTGAACCAAGTCTTCTATTTATCTTCTTCCTCAATGGAGCAGATCTTAATTTTTCTTTCATAGAACCATGTCCAAGGCATCTCGAAATGTGTGCTCTTGGTAACATTTGCTGAAAATTAAGGACCCCATATTGAACTTCTATTGGACATGAGATTTTGTTACAATTGTGTCTCTGTAACTAGTTTTGAGCTGTTCCAATCATTTTCTGCCACTTGTTGGACTAATTGGACCTTGCAATAAATTATGTTGCTACTTTGCACATGCCATAATAAGGGTTAGTGCTTTGACTAAGGGAAGATGATATATGTATATATATATATATGTATATATATATATATTATCTTGTTGTTGCATCAATGGAGAAGTTTATGTGCTATTTTACCTTGTTAATACTAGTTGTAAGAGCAAAAATTACTTTGTGGCCATTTTCTTCAGTGCAAACTGGGAATCAACATGTGGGATGAGGGATTATTGGAGTTATATATCAGCCTTCAACCACTTCCCCTTGATGTGAAATTTTCAGTCCCCTTTCTTTGTGAATAATGGAGTTCCAGAGAATGTACGATGTTCGGAGACTTGAACCAAGAGGTGCATCCTTAGATTACGTTAGGGCAATTAAATACATGTACTATGGAGCAAGGAAACTCAGATCACTTCTCGTTGTGATGGGGTTGCACCAGGGATCGACACATAGCCCATTTCTAGTTACTAACACGACTTATCCTAGGAAAAGTCCATGATATATGCTCTTTGCAGATGACAATGTGGTAATGAGACCAGGACAGAGTTAACAATAGGTGCCTTAACAATATATTGGAAATTTGAGGACAGACGTTGGAGTATAAAGAGTCTGGGTTGAGTAGGACTTAGACAAAATACTTGAAGTTCAAGTTCAATGACGTAAAACACATGGTAGATGTGGAAGTAAGGATTGAAACAAGCAGGGATCAATGATTCAGGAAAATAAGGAGATAGACGAAGATGTTACACATTGTATTGGAGCAGGTGGATGACGTTCACTGTCTTTTATGATAAGATTGTACCACCAAAGCCTTAAGGTAGGTATTACAAAGTGGTGGTCAGACTAGCTATGGACAGAGTGTTGACTAGACAAGAACTCGCATGTATAGAAGATGAGAGTAGTAGAAATGAGAATGTTGAGTTGGATGTTTGGGCATACTAAGATTGAGATTAGGAATGAAGCTATACGCGACATTGTGGGATAGGGCGCCTTGGTGAACAAGATGAGGCATGTGAAGCTGAGATGGTTCGAACATGTGAAGGAAACATGCATGAATACCCCGATTAGGAGCGAGAGGTTGGCTATAGAGGATGTAACATGATGTAGAGGTAGACCGAGAAGTCTCAAAAGAAATGATTAGATAGGACATGACTCATGCAGCTTACCTTTATGAGGACATGACCTTGGCCCTAGATAGGAAGATATGGCGGTCAAAAATTAGGGTAGAAGGTCAGTAGGTCGAACATTGTCTTGTTCTCTCTTACTGTCTTATTCGATTTTAGTATTACATGATTTTTCATTTGCTAACAGCTACCGTTATTTTAAATTTTTTGGTGTTGCTATTGCTCTCTTTATTGATTTCAGCATGACTTTGATTTTAGGATTACATTATTGTATTTGCTTTGCATACTTGTTTTTTATATGCTTTACCTGTGTCGTTTATCTGGTAGATACAACCTCTCTACCTTTCAAAAGGTAGGGGTAAGGCCGTGTACACACCATCCTCCTCAGACCCCACTTGTGGGATTATAACTGGCCCAGTTGAGCTGGGTATGTTTTTATTGGATCTCCAGATGAAGACCAGACAATACTTTTCTTGACAAATTGCTTTACGTGGAAGGCTGCTGATACTGCATTAGTTGCTTACATTTGGTTTTCACTAGACATCTTTTTCATATTATACATAAATATGCAGGCTACACTAGAAACTACTATATAGAATTGGATAATCCGTAGTGAATAAATTTATCTTGGGTCTGTTTTGTTTTCTCACTCCATGTAGCATGGGCACTTTATTAGATACATATTCAAGTATAGTTTAAGGCTCCACCTGCAAGGACTTTTTTAACTTTAACTTCTTCCAATTTTTGCAAAGTGGACTATTTGTTAAATCAAAAGTAGATATATATTAGCAGCTTCAAAAAAAAAAAGTAGATGTATATTAGAATCTAGCTATTAGTAGTCCTTTGTAATTATAATGATGAACAACAATATATTTTCCTAATCATATGTTAGTCGACTTACTAGTTAATTAACTAAATAGTTCTTATTGTATCCTCAGGCTACGTTCCTTTGAGGTCTACTTTGATATATAGGGTGAAATGGTAGGGCAAAGTGACAAGACACTGAAGAAAACAGCTATAAGAAGAAAAGATATGAAAGCAGATGAAGAATTAGTTCTCATAAACCAGTTAAAAAAAAGTCATGAGATTACCATTAAGTAGCTTATCTAGTAAAATTTGAGTCAGGGAGCAGGGAGCTGAACTATACACCACAGATAAAAATCAGTTCATAAAAAATTCAGCCAATTGGTTTATGAGAAAACTAATTCTTAAATAGTATGTAATAAATTTCACTAGTTCAAGAAATCCATTCTCACTTGCTGTCTATTTTTTCAGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTT</genome_strand>
        <mrna_strand>TGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTTAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTTATTCTAAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E274199" ref_strand="+" ref_description="SGN-E274199 [cLEN-8-D22]">
      <seq>tcagaaaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacactttctcggaatttgcttcgtttgagcagtacatcaccatcttcagattctcaactgaggaagaccccctataat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="100266" stop="101353"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100566" g_stop="100644" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100781" g_stop="101053" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="352" r_length="273" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E274199" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>352</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E274199" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100566" e_stop="100644"/>
          <exon e_start="100781" e_stop="101053"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAAT</genome_strand>
        <mrna_strand>TCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTTCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369042" ref_strand="+" ref_description="SGN-E369042 [TUS-25-L1]">
      <seq>aaagaaaggagattgaggataaattacaagttctgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcgtttgagcagtacatcaccatcttcagattctcaactgaggaagaccccctataatgtggttcctctcgcttcacgatctgttggagttactgttagtccttcacggtttgcacctccgggacagcaagggcaaccttcaagtctccccccagtgtccttatctggaacgaacattgttgcctcctctccttctcctgtagcatcaggcggcacttcagcatttcgagatcggtttgcaagcccatgaaaatgggagttgtgctagttgttactcctcctgtcagctggctttctgttctctcaacctcattctaagtttcaactggctaatctatgaagctgtaaattattctgtagttccaaattggtcattcgctgtaacggtagcagtgacgatgcagtgtcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="100271" stop="104549"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100571" g_stop="100644" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100781" g_stop="101056" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="350" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103900" g_stop="104249" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="700" r_length="350" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E369042" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369042" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100571" e_stop="100644"/>
          <exon e_start="100781" e_stop="101056"/>
          <exon e_start="103900" e_stop="104249"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTGGTAAGTGCCCTATCTATGCGTGCATTGTTACCTTTGGCTTTCATTTGTGGCGCTACACCACCAGGAGTGGAAAAAGAGGGCTTTAATTTTTGTTTCTAATATAATTAATCTAGCAAAGATTTAAAAAGTTTTAAGTAAAGCAACAACATTCAATATGTGCAAGACTGCAAGTTAGTTCATCATATTATTGCTGGTTCACTCCCTTGAACCAAGTCTTCTATTTATCTTCTTCCTCAATGGAGCAGATCTTAATTTTTCTTTCATAGAACCATGTCCAAGGCATCTCGAAATGTGTGCTCTTGGTAACATTTGCTGAAAATTAAGGACCCCATATTGAACTTCTATTGGACATGAGATTTTGTTACAATTGTGTCTCTGTAACTAGTTTTGAGCTGTTCCAATCATTTTCTGCCACTTGTTGGACTAATTGGACCTTGCAATAAATTATGTTGCTACTTTGCACATGCCATAATAAGGGTTAGTGCTTTGACTAAGGGAAGATGATATATGTATATATATATATATGTATATATATATATATTATCTTGTTGTTGCATCAATGGAGAAGTTTATGTGCTATTTTACCTTGTTAATACTAGTTGTAAGAGCAAAAATTACTTTGTGGCCATTTTCTTCAGTGCAAACTGGGAATCAACATGTGGGATGAGGGATTATTGGAGTTATATATCAGCCTTCAACCACTTCCCCTTGATGTGAAATTTTCAGTCCCCTTTCTTTGTGAATAATGGAGTTCCAGAGAATGTACGATGTTCGGAGACTTGAACCAAGAGGTGCATCCTTAGATTACGTTAGGGCAATTAAATACATGTACTATGGAGCAAGGAAACTCAGATCACTTCTCGTTGTGATGGGGTTGCACCAGGGATCGACACATAGCCCATTTCTAGTTACTAACACGACTTATCCTAGGAAAAGTCCATGATATATGCTCTTTGCAGATGACAATGTGGTAATGAGACCAGGACAGAGTTAACAATAGGTGCCTTAACAATATATTGGAAATTTGAGGACAGACGTTGGAGTATAAAGAGTCTGGGTTGAGTAGGACTTAGACAAAATACTTGAAGTTCAAGTTCAATGACGTAAAACACATGGTAGATGTGGAAGTAAGGATTGAAACAAGCAGGGATCAATGATTCAGGAAAATAAGGAGATAGACGAAGATGTTACACATTGTATTGGAGCAGGTGGATGACGTTCACTGTCTTTTATGATAAGATTGTACCACCAAAGCCTTAAGGTAGGTATTACAAAGTGGTGGTCAGACTAGCTATGGACAGAGTGTTGACTAGACAAGAACTCGCATGTATAGAAGATGAGAGTAGTAGAAATGAGAATGTTGAGTTGGATGTTTGGGCATACTAAGATTGAGATTAGGAATGAAGCTATACGCGACATTGTGGGATAGGGCGCCTTGGTGAACAAGATGAGGCATGTGAAGCTGAGATGGTTCGAACATGTGAAGGAAACATGCATGAATACCCCGATTAGGAGCGAGAGGTTGGCTATAGAGGATGTAACATGATGTAGAGGTAGACCGAGAAGTCTCAAAAGAAATGATTAGATAGGACATGACTCATGCAGCTTACCTTTATGAGGACATGACCTTGGCCCTAGATAGGAAGATATGGCGGTCAAAAATTAGGGTAGAAGGTCAGTAGGTCGAACATTGTCTTGTTCTCTCTTACTGTCTTATTCGATTTTAGTATTACATGATTTTTCATTTGCTAACAGCTACCGTTATTTTAAATTTTTTGGTGTTGCTATTGCTCTCTTTATTGATTTCAGCATGACTTTGATTTTAGGATTACATTATTGTATTTGCTTTGCATACTTGTTTTTTATATGCTTTACCTGTGTCGTTTATCTGGTAGATACAACCTCTCTACCTTTCAAAAGGTAGGGGTAAGGCCGTGTACACACCATCCTCCTCAGACCCCACTTGTGGGATTATAACTGGCCCAGTTGAGCTGGGTATGTTTTTATTGGATCTCCAGATGAAGACCAGACAATACTTTTCTTGACAAATTGCTTTACGTGGAAGGCTGCTGATACTGCATTAGTTGCTTACATTTGGTTTTCACTAGACATCTTTTTCATATTATACATAAATATGCAGGCTACACTAGAAACTACTATATAGAATTGGATAATCCGTAGTGAATAAATTTATCTTGGGTCTGTTTTGTTTTCTCACTCCATGTAGCATGGGCACTTTATTAGATACATATTCAAGTATAGTTTAAGGCTCCACCTGCAAGGACTTTTTTAACTTTAACTTCTTCCAATTTTTGCAAAGTGGACTATTTGTTAAATCAAAAGTAGATATATATTAGCAGCTTCAAAAAAAAAAAGTAGATGTATATTAGAATCTAGCTATTAGTAGTCCTTTGTAATTATAATGATGAACAACAATATATTTTCCTAATCATATGTTAGTCGACTTACTAGTTAATTAACTAAATAGTTCTTATTGTATCCTCAGGCTACGTTCCTTTGAGGTCTACTTTGATATATAGGGTGAAATGGTAGGGCAAAGTGACAAGACACTGAAGAAAACAGCTATAAGAAGAAAAGATATGAAAGCAGATGAAGAATTAGTTCTCATAAACCAGTTAAAAAAAAGTCATGAGATTACCATTAAGTAGCTTATCTAGTAAAATTTGAGTCAGGGAGCAGGGAGCTGAACTATACACCACAGATAAAAATCAGTTCATAAAAAATTCAGCCAATTGGTTTATGAGAAAACTAATTCTTAAATAGTATGTAATAAATTTCACTAGTTCAAGAAATCCATTCTCACTTGCTGTCTATTTTTTCAGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTT</genome_strand>
        <mrna_strand>AAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E248974" ref_strand="+" ref_description="SGN-E248974 [cLEF-49-N22]">
      <seq>aaagaaaggagattgaggataaattacaagttgtgaatatgaaaaagcatggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcgtttgagcagtacatcaccatcttcagattctcaactgaggaagaccccctataatgtggttcctctcgcttcacgatctgttggagttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="100271" stop="104232"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100571" g_stop="100644" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100781" g_stop="101056" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="350" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103900" g_stop="103932" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="383" r_length="33" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E248974" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>383</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E248974" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100571" e_stop="100644"/>
          <exon e_start="100781" e_stop="101056"/>
          <exon e_start="103900" e_stop="103932"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTGGTAAGTGCCCTATCTATGCGTGCATTGTTACCTTTGGCTTTCATTTGTGGCGCTACACCACCAGGAGTGGAAAAAGAGGGCTTTAATTTTTGTTTCTAATATAATTAATCTAGCAAAGATTTAAAAAGTTTTAAGTAAAGCAACAACATTCAATATGTGCAAGACTGCAAGTTAGTTCATCATATTATTGCTGGTTCACTCCCTTGAACCAAGTCTTCTATTTATCTTCTTCCTCAATGGAGCAGATCTTAATTTTTCTTTCATAGAACCATGTCCAAGGCATCTCGAAATGTGTGCTCTTGGTAACATTTGCTGAAAATTAAGGACCCCATATTGAACTTCTATTGGACATGAGATTTTGTTACAATTGTGTCTCTGTAACTAGTTTTGAGCTGTTCCAATCATTTTCTGCCACTTGTTGGACTAATTGGACCTTGCAATAAATTATGTTGCTACTTTGCACATGCCATAATAAGGGTTAGTGCTTTGACTAAGGGAAGATGATATATGTATATATATATATATGTATATATATATATATTATCTTGTTGTTGCATCAATGGAGAAGTTTATGTGCTATTTTACCTTGTTAATACTAGTTGTAAGAGCAAAAATTACTTTGTGGCCATTTTCTTCAGTGCAAACTGGGAATCAACATGTGGGATGAGGGATTATTGGAGTTATATATCAGCCTTCAACCACTTCCCCTTGATGTGAAATTTTCAGTCCCCTTTCTTTGTGAATAATGGAGTTCCAGAGAATGTACGATGTTCGGAGACTTGAACCAAGAGGTGCATCCTTAGATTACGTTAGGGCAATTAAATACATGTACTATGGAGCAAGGAAACTCAGATCACTTCTCGTTGTGATGGGGTTGCACCAGGGATCGACACATAGCCCATTTCTAGTTACTAACACGACTTATCCTAGGAAAAGTCCATGATATATGCTCTTTGCAGATGACAATGTGGTAATGAGACCAGGACAGAGTTAACAATAGGTGCCTTAACAATATATTGGAAATTTGAGGACAGACGTTGGAGTATAAAGAGTCTGGGTTGAGTAGGACTTAGACAAAATACTTGAAGTTCAAGTTCAATGACGTAAAACACATGGTAGATGTGGAAGTAAGGATTGAAACAAGCAGGGATCAATGATTCAGGAAAATAAGGAGATAGACGAAGATGTTACACATTGTATTGGAGCAGGTGGATGACGTTCACTGTCTTTTATGATAAGATTGTACCACCAAAGCCTTAAGGTAGGTATTACAAAGTGGTGGTCAGACTAGCTATGGACAGAGTGTTGACTAGACAAGAACTCGCATGTATAGAAGATGAGAGTAGTAGAAATGAGAATGTTGAGTTGGATGTTTGGGCATACTAAGATTGAGATTAGGAATGAAGCTATACGCGACATTGTGGGATAGGGCGCCTTGGTGAACAAGATGAGGCATGTGAAGCTGAGATGGTTCGAACATGTGAAGGAAACATGCATGAATACCCCGATTAGGAGCGAGAGGTTGGCTATAGAGGATGTAACATGATGTAGAGGTAGACCGAGAAGTCTCAAAAGAAATGATTAGATAGGACATGACTCATGCAGCTTACCTTTATGAGGACATGACCTTGGCCCTAGATAGGAAGATATGGCGGTCAAAAATTAGGGTAGAAGGTCAGTAGGTCGAACATTGTCTTGTTCTCTCTTACTGTCTTATTCGATTTTAGTATTACATGATTTTTCATTTGCTAACAGCTACCGTTATTTTAAATTTTTTGGTGTTGCTATTGCTCTCTTTATTGATTTCAGCATGACTTTGATTTTAGGATTACATTATTGTATTTGCTTTGCATACTTGTTTTTTATATGCTTTACCTGTGTCGTTTATCTGGTAGATACAACCTCTCTACCTTTCAAAAGGTAGGGGTAAGGCCGTGTACACACCATCCTCCTCAGACCCCACTTGTGGGATTATAACTGGCCCAGTTGAGCTGGGTATGTTTTTATTGGATCTCCAGATGAAGACCAGACAATACTTTTCTTGACAAATTGCTTTACGTGGAAGGCTGCTGATACTGCATTAGTTGCTTACATTTGGTTTTCACTAGACATCTTTTTCATATTATACATAAATATGCAGGCTACACTAGAAACTACTATATAGAATTGGATAATCCGTAGTGAATAAATTTATCTTGGGTCTGTTTTGTTTTCTCACTCCATGTAGCATGGGCACTTTATTAGATACATATTCAAGTATAGTTTAAGGCTCCACCTGCAAGGACTTTTTTAACTTTAACTTCTTCCAATTTTTGCAAAGTGGACTATTTGTTAAATCAAAAGTAGATATATATTAGCAGCTTCAAAAAAAAAAAGTAGATGTATATTAGAATCTAGCTATTAGTAGTCCTTTGTAATTATAATGATGAACAACAATATATTTTCCTAATCATATGTTAGTCGACTTACTAGTTAATTAACTAAATAGTTCTTATTGTATCCTCAGGCTACGTTCCTTTGAGGTCTACTTTGATATATAGGGTGAAATGGTAGGGCAAAGTGACAAGACACTGAAGAAAACAGCTATAAGAAGAAAAGATATGAAAGCAGATGAAGAATTAGTTCTCATAAACCAGTTAAAAAAAAGTCATGAGATTACCATTAAGTAGCTTATCTAGTAAAATTTGAGTCAGGGAGCAGGGAGCTGAACTATACACCACAGATAAAAATCAGTTCATAAAAAATTCAGCCAATTGGTTTATGAGAAAACTAATTCTTAAATAGTATGTAATAAATTTCACTAGTTCAAGAAATCCATTCTCACTTGCTGTCTATTTTTTCAGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACT</genome_strand>
        <mrna_strand>AAAGAAAGGAGATTGAGGATAAATTACAAGTTGTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTCTCGCTTCACGATCTGTTGGAGTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E267227" ref_strand="+" ref_description="SGN-E267227 [cLEI-4-D1]">
      <seq>catggtttggtacaattactaaaacagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcgtttgagcagtacatcaccatcttcagattctcaactgaggaagaccccctataatgtggttcctctcgcttcacgatctgttggagttactgttagtccttcacggtttgcacctccgggacagcaagggcaaccttcaagtctccccccagtgtccttatctggaacgaacattgttgcctcctctccttctcctgtagcatcaggcggcacttcagcatttcgagatcggtttgcaagcccatgaaaatgggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="100318" stop="104397"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100618" g_stop="100644" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100781" g_stop="101056" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="303" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103900" g_stop="104097" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="501" r_length="198" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E267227" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267227" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100618" e_stop="100644"/>
          <exon e_start="100781" e_stop="101056"/>
          <exon e_start="103900" e_stop="104097"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGGTTTGGTACAATTACTAAAACAGGTGATCTTAATGTAAAACAATCTGAGGAGGAATTGAAACTTTTACATGATGTCTCATTTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTGGTAAGTGCCCTATCTATGCGTGCATTGTTACCTTTGGCTTTCATTTGTGGCGCTACACCACCAGGAGTGGAAAAAGAGGGCTTTAATTTTTGTTTCTAATATAATTAATCTAGCAAAGATTTAAAAAGTTTTAAGTAAAGCAACAACATTCAATATGTGCAAGACTGCAAGTTAGTTCATCATATTATTGCTGGTTCACTCCCTTGAACCAAGTCTTCTATTTATCTTCTTCCTCAATGGAGCAGATCTTAATTTTTCTTTCATAGAACCATGTCCAAGGCATCTCGAAATGTGTGCTCTTGGTAACATTTGCTGAAAATTAAGGACCCCATATTGAACTTCTATTGGACATGAGATTTTGTTACAATTGTGTCTCTGTAACTAGTTTTGAGCTGTTCCAATCATTTTCTGCCACTTGTTGGACTAATTGGACCTTGCAATAAATTATGTTGCTACTTTGCACATGCCATAATAAGGGTTAGTGCTTTGACTAAGGGAAGATGATATATGTATATATATATATATGTATATATATATATATTATCTTGTTGTTGCATCAATGGAGAAGTTTATGTGCTATTTTACCTTGTTAATACTAGTTGTAAGAGCAAAAATTACTTTGTGGCCATTTTCTTCAGTGCAAACTGGGAATCAACATGTGGGATGAGGGATTATTGGAGTTATATATCAGCCTTCAACCACTTCCCCTTGATGTGAAATTTTCAGTCCCCTTTCTTTGTGAATAATGGAGTTCCAGAGAATGTACGATGTTCGGAGACTTGAACCAAGAGGTGCATCCTTAGATTACGTTAGGGCAATTAAATACATGTACTATGGAGCAAGGAAACTCAGATCACTTCTCGTTGTGATGGGGTTGCACCAGGGATCGACACATAGCCCATTTCTAGTTACTAACACGACTTATCCTAGGAAAAGTCCATGATATATGCTCTTTGCAGATGACAATGTGGTAATGAGACCAGGACAGAGTTAACAATAGGTGCCTTAACAATATATTGGAAATTTGAGGACAGACGTTGGAGTATAAAGAGTCTGGGTTGAGTAGGACTTAGACAAAATACTTGAAGTTCAAGTTCAATGACGTAAAACACATGGTAGATGTGGAAGTAAGGATTGAAACAAGCAGGGATCAATGATTCAGGAAAATAAGGAGATAGACGAAGATGTTACACATTGTATTGGAGCAGGTGGATGACGTTCACTGTCTTTTATGATAAGATTGTACCACCAAAGCCTTAAGGTAGGTATTACAAAGTGGTGGTCAGACTAGCTATGGACAGAGTGTTGACTAGACAAGAACTCGCATGTATAGAAGATGAGAGTAGTAGAAATGAGAATGTTGAGTTGGATGTTTGGGCATACTAAGATTGAGATTAGGAATGAAGCTATACGCGACATTGTGGGATAGGGCGCCTTGGTGAACAAGATGAGGCATGTGAAGCTGAGATGGTTCGAACATGTGAAGGAAACATGCATGAATACCCCGATTAGGAGCGAGAGGTTGGCTATAGAGGATGTAACATGATGTAGAGGTAGACCGAGAAGTCTCAAAAGAAATGATTAGATAGGACATGACTCATGCAGCTTACCTTTATGAGGACATGACCTTGGCCCTAGATAGGAAGATATGGCGGTCAAAAATTAGGGTAGAAGGTCAGTAGGTCGAACATTGTCTTGTTCTCTCTTACTGTCTTATTCGATTTTAGTATTACATGATTTTTCATTTGCTAACAGCTACCGTTATTTTAAATTTTTTGGTGTTGCTATTGCTCTCTTTATTGATTTCAGCATGACTTTGATTTTAGGATTACATTATTGTATTTGCTTTGCATACTTGTTTTTTATATGCTTTACCTGTGTCGTTTATCTGGTAGATACAACCTCTCTACCTTTCAAAAGGTAGGGGTAAGGCCGTGTACACACCATCCTCCTCAGACCCCACTTGTGGGATTATAACTGGCCCAGTTGAGCTGGGTATGTTTTTATTGGATCTCCAGATGAAGACCAGACAATACTTTTCTTGACAAATTGCTTTACGTGGAAGGCTGCTGATACTGCATTAGTTGCTTACATTTGGTTTTCACTAGACATCTTTTTCATATTATACATAAATATGCAGGCTACACTAGAAACTACTATATAGAATTGGATAATCCGTAGTGAATAAATTTATCTTGGGTCTGTTTTGTTTTCTCACTCCATGTAGCATGGGCACTTTATTAGATACATATTCAAGTATAGTTTAAGGCTCCACCTGCAAGGACTTTTTTAACTTTAACTTCTTCCAATTTTTGCAAAGTGGACTATTTGTTAAATCAAAAGTAGATATATATTAGCAGCTTCAAAAAAAAAAAGTAGATGTATATTAGAATCTAGCTATTAGTAGTCCTTTGTAATTATAATGATGAACAACAATATATTTTCCTAATCATATGTTAGTCGACTTACTAGTTAATTAACTAAATAGTTCTTATTGTATCCTCAGGCTACGTTCCTTTGAGGTCTACTTTGATATATAGGGTGAAATGGTAGGGCAAAGTGACAAGACACTGAAGAAAACAGCTATAAGAAGAAAAGATATGAAAGCAGATGAAGAATTAGTTCTCATAAACCAGTTAAAAAAAAGTCATGAGATTACCATTAAGTAGCTTATCTAGTAAAATTTGAGTCAGGGAGCAGGGAGCTGAACTATACACCACAGATAAAAATCAGTTCATAAAAAATTCAGCCAATTGGTTTATGAGAAAACTAATTCTTAAATAGTATGTAATAAATTTCACTAGTTCAAGAAATCCATTCTCACTTGCTGTCTATTTTTTCAGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAG</genome_strand>
        <mrna_strand>CATGGTTTGGTACAATTACTAAAACAG........................................................................................................................................ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E553440" ref_strand="-" ref_description="SGN-E553440 [cTSC-1-C1]">
      <seq>ttttaatttgttcctattcggcaaaattaggtattacttagcatgatcatttttttgtttacaagtattggcttttggcagattttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcaccccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcgtttgagcagtacatcaccatcttcagattctcaactgaggaagaccccctataatgtggttcctctcgcttcacgatctgttggagttactgttagtccttcacggtttgcacctccgggacagcaagggcaaccttcaagtctccccccagtgtccttatctggaacgaacattgttgcctcctctccttctcctgtagcatcaggcggcacttcagcatttcgagatcggtttgcaagcccatgaaaatgggagttgtgctagttgttactcctcctgtcagctggctttctgttctctcaacctcattctaagtttcaactggctaatctatgaagctgtaaattattctgtagttccaaattggtcattcgctgtaacggtagcagtgacgatgcagtgtctttaagtctggtgccttctagttggaagtatagtatttccgttaatctggctgggtgtgtgtccatccgatacttgtgaagtttcccatggtcatgtttttagttcttaaaagatgttagaactgaatatcctatgtacatatattatgccattttgcttttaagtcgttaagttgtaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="100401" stop="104724"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100702" g_stop="101056" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="358" r_length="358" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103900" g_stop="104423" g_length="524"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="882" r_length="524" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E553440" ref_strand="-">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>879</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E553440" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="100702" e_stop="101056"/>
          <exon e_start="103900" e_stop="104423"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTATTTGTTCTTA-TCTGTCAAATTATGTATTACTTAGCATGATCA-TTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCA-CCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTGGTAAGTGCCCTATCTATGCGTGCATTGTTACCTTTGGCTTTCATTTGTGGCGCTACACCACCAGGAGTGGAAAAAGAGGGCTTTAATTTTTGTTTCTAATATAATTAATCTAGCAAAGATTTAAAAAGTTTTAAGTAAAGCAACAACATTCAATATGTGCAAGACTGCAAGTTAGTTCATCATATTATTGCTGGTTCACTCCCTTGAACCAAGTCTTCTATTTATCTTCTTCCTCAATGGAGCAGATCTTAATTTTTCTTTCATAGAACCATGTCCAAGGCATCTCGAAATGTGTGCTCTTGGTAACATTTGCTGAAAATTAAGGACCCCATATTGAACTTCTATTGGACATGAGATTTTGTTACAATTGTGTCTCTGTAACTAGTTTTGAGCTGTTCCAATCATTTTCTGCCACTTGTTGGACTAATTGGACCTTGCAATAAATTATGTTGCTACTTTGCACATGCCATAATAAGGGTTAGTGCTTTGACTAAGGGAAGATGATATATGTATATATATATATATGTATATATATATATATTATCTTGTTGTTGCATCAATGGAGAAGTTTATGTGCTATTTTACCTTGTTAATACTAGTTGTAAGAGCAAAAATTACTTTGTGGCCATTTTCTTCAGTGCAAACTGGGAATCAACATGTGGGATGAGGGATTATTGGAGTTATATATCAGCCTTCAACCACTTCCCCTTGATGTGAAATTTTCAGTCCCCTTTCTTTGTGAATAATGGAGTTCCAGAGAATGTACGATGTTCGGAGACTTGAACCAAGAGGTGCATCCTTAGATTACGTTAGGGCAATTAAATACATGTACTATGGAGCAAGGAAACTCAGATCACTTCTCGTTGTGATGGGGTTGCACCAGGGATCGACACATAGCCCATTTCTAGTTACTAACACGACTTATCCTAGGAAAAGTCCATGATATATGCTCTTTGCAGATGACAATGTGGTAATGAGACCAGGACAGAGTTAACAATAGGTGCCTTAACAATATATTGGAAATTTGAGGACAGACGTTGGAGTATAAAGAGTCTGGGTTGAGTAGGACTTAGACAAAATACTTGAAGTTCAAGTTCAATGACGTAAAACACATGGTAGATGTGGAAGTAAGGATTGAAACAAGCAGGGATCAATGATTCAGGAAAATAAGGAGATAGACGAAGATGTTACACATTGTATTGGAGCAGGTGGATGACGTTCACTGTCTTTTATGATAAGATTGTACCACCAAAGCCTTAAGGTAGGTATTACAAAGTGGTGGTCAGACTAGCTATGGACAGAGTGTTGACTAGACAAGAACTCGCATGTATAGAAGATGAGAGTAGTAGAAATGAGAATGTTGAGTTGGATGTTTGGGCATACTAAGATTGAGATTAGGAATGAAGCTATACGCGACATTGTGGGATAGGGCGCCTTGGTGAACAAGATGAGGCATGTGAAGCTGAGATGGTTCGAACATGTGAAGGAAACATGCATGAATACCCCGATTAGGAGCGAGAGGTTGGCTATAGAGGATGTAACATGATGTAGAGGTAGACCGAGAAGTCTCAAAAGAAATGATTAGATAGGACATGACTCATGCAGCTTACCTTTATGAGGACATGACCTTGGCCCTAGATAGGAAGATATGGCGGTCAAAAATTAGGGTAGAAGGTCAGTAGGTCGAACATTGTCTTGTTCTCTCTTACTGTCTTATTCGATTTTAGTATTACATGATTTTTCATTTGCTAACAGCTACCGTTATTTTAAATTTTTTGGTGTTGCTATTGCTCTCTTTATTGATTTCAGCATGACTTTGATTTTAGGATTACATTATTGTATTTGCTTTGCATACTTGTTTTTTATATGCTTTACCTGTGTCGTTTATCTGGTAGATACAACCTCTCTACCTTTCAAAAGGTAGGGGTAAGGCCGTGTACACACCATCCTCCTCAGACCCCACTTGTGGGATTATAACTGGCCCAGTTGAGCTGGGTATGTTTTTATTGGATCTCCAGATGAAGACCAGACAATACTTTTCTTGACAAATTGCTTTACGTGGAAGGCTGCTGATACTGCATTAGTTGCTTACATTTGGTTTTCACTAGACATCTTTTTCATATTATACATAAATATGCAGGCTACACTAGAAACTACTATATAGAATTGGATAATCCGTAGTGAATAAATTTATCTTGGGTCTGTTTTGTTTTCTCACTCCATGTAGCATGGGCACTTTATTAGATACATATTCAAGTATAGTTTAAGGCTCCACCTGCAAGGACTTTTTTAACTTTAACTTCTTCCAATTTTTGCAAAGTGGACTATTTGTTAAATCAAAAGTAGATATATATTAGCAGCTTCAAAAAAAAAAAGTAGATGTATATTAGAATCTAGCTATTAGTAGTCCTTTGTAATTATAATGATGAACAACAATATATTTTCCTAATCATATGTTAGTCGACTTACTAGTTAATTAACTAAATAGTTCTTATTGTATCCTCAGGCTACGTTCCTTTGAGGTCTACTTTGATATATAGGGTGAAATGGTAGGGCAAAGTGACAAGACACTGAAGAAAACAGCTATAAGAAGAAAAGATATGAAAGCAGATGAAGAATTAGTTCTCATAAACCAGTTAAAAAAAAGTCATGAGATTACCATTAAGTAGCTTATCTAGTAAAATTTGAGTCAGGGAGCAGGGAGCTGAACTATACACCACAGATAAAAATCAGTTCATAAAAAATTCAGCCAATTGGTTTATGAGAAAACTAATTCTTAAATAGTATGTAATAAATTTCACTAGTTCAAGAAATCCATTCTCACTTGCTGTCTATTTTTTCAGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTTAAGTCTGGTGCCTTCTAGTTGGAAGTATAGTATTTCCGTTAATCTGGCTGGGTGTGTGTCCATCCGATACTTGTGAAGTTTCCCATGGTCATGTTTTTAGTTCTTAAAAGATGTTAGAACTGAATATCCTATGTACATATATTATGCCATTTTGCTTTTAAGTCGTTAAGTTGT</genome_strand>
        <mrna_strand>TTTTAATTTGTTCCTATTCGGCAAAATTAGGTATTACTTAGCATGATCATTTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTTAAGTCTGGTGCCTTCTAGTTGGAAGTATAGTATTTCCGTTAATCTGGCTGGGTGTGTGTCCATCCGATACTTGTGAAGTTTCCCATGGTCATGTTTTTAGTTCTTAAAAGATGTTAGAACTGAATATCCTATGTACATATATTATGCCATTTTGCTTTTAAGTCGTTAAGTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E379678" ref_strand="+" ref_description="SGN-E379678 [TUS-3-O9](-)">
      <seq>aacagatttgaatgcagaagaggagctgaagagacgaagcatgcaaggaatggcagtgcggccatcacccccacttcaagtggatacaacaaacgacactggatctataactaaactaaacacacctagaatgggcttggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcgtttgagcagtacatcaccatcttcagattctcaactgaggaagaccccctataatgtggttcctctcgcttcacgatctgttggagttactgttagtccttcacggtttgcacctccgggacagcaagggcaaccttcaagtctccccccagtgtccttatctggaacgaacattgttgcctcctctccttctcctgtagcatcaggcggcacttcagcatttcgagatcggtttgcaagcccatgaaaatgggagttgtgctagttgttactcctcctgtcagctggctttctgttctctcaacctcattctaagtttcaactggctaatctatgaagctgtaaattattctgtagttccaaattggtcattcgctgtaacggtagcagtgacgatgcagtgtctttaagtctggtgccttctagttggaagtatagtatttccgttaatctggctgggtgtgtgtccatccgatacttgtgaagtttcccatggtcatgtttttaggaataaaagatgttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="100478" stop="104649"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100776" g_stop="101056" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="280" r_length="280" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103900" g_stop="104366" g_length="467"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="746" r_length="466" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E379678" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>748</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E379678" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100776" e_stop="101056"/>
          <exon e_start="103900" e_stop="104366"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTGGTAAGTGCCCTATCTATGCGTGCATTGTTACCTTTGGCTTTCATTTGTGGCGCTACACCACCAGGAGTGGAAAAAGAGGGCTTTAATTTTTGTTTCTAATATAATTAATCTAGCAAAGATTTAAAAAGTTTTAAGTAAAGCAACAACATTCAATATGTGCAAGACTGCAAGTTAGTTCATCATATTATTGCTGGTTCACTCCCTTGAACCAAGTCTTCTATTTATCTTCTTCCTCAATGGAGCAGATCTTAATTTTTCTTTCATAGAACCATGTCCAAGGCATCTCGAAATGTGTGCTCTTGGTAACATTTGCTGAAAATTAAGGACCCCATATTGAACTTCTATTGGACATGAGATTTTGTTACAATTGTGTCTCTGTAACTAGTTTTGAGCTGTTCCAATCATTTTCTGCCACTTGTTGGACTAATTGGACCTTGCAATAAATTATGTTGCTACTTTGCACATGCCATAATAAGGGTTAGTGCTTTGACTAAGGGAAGATGATATATGTATATATATATATATGTATATATATATATATTATCTTGTTGTTGCATCAATGGAGAAGTTTATGTGCTATTTTACCTTGTTAATACTAGTTGTAAGAGCAAAAATTACTTTGTGGCCATTTTCTTCAGTGCAAACTGGGAATCAACATGTGGGATGAGGGATTATTGGAGTTATATATCAGCCTTCAACCACTTCCCCTTGATGTGAAATTTTCAGTCCCCTTTCTTTGTGAATAATGGAGTTCCAGAGAATGTACGATGTTCGGAGACTTGAACCAAGAGGTGCATCCTTAGATTACGTTAGGGCAATTAAATACATGTACTATGGAGCAAGGAAACTCAGATCACTTCTCGTTGTGATGGGGTTGCACCAGGGATCGACACATAGCCCATTTCTAGTTACTAACACGACTTATCCTAGGAAAAGTCCATGATATATGCTCTTTGCAGATGACAATGTGGTAATGAGACCAGGACAGAGTTAACAATAGGTGCCTTAACAATATATTGGAAATTTGAGGACAGACGTTGGAGTATAAAGAGTCTGGGTTGAGTAGGACTTAGACAAAATACTTGAAGTTCAAGTTCAATGACGTAAAACACATGGTAGATGTGGAAGTAAGGATTGAAACAAGCAGGGATCAATGATTCAGGAAAATAAGGAGATAGACGAAGATGTTACACATTGTATTGGAGCAGGTGGATGACGTTCACTGTCTTTTATGATAAGATTGTACCACCAAAGCCTTAAGGTAGGTATTACAAAGTGGTGGTCAGACTAGCTATGGACAGAGTGTTGACTAGACAAGAACTCGCATGTATAGAAGATGAGAGTAGTAGAAATGAGAATGTTGAGTTGGATGTTTGGGCATACTAAGATTGAGATTAGGAATGAAGCTATACGCGACATTGTGGGATAGGGCGCCTTGGTGAACAAGATGAGGCATGTGAAGCTGAGATGGTTCGAACATGTGAAGGAAACATGCATGAATACCCCGATTAGGAGCGAGAGGTTGGCTATAGAGGATGTAACATGATGTAGAGGTAGACCGAGAAGTCTCAAAAGAAATGATTAGATAGGACATGACTCATGCAGCTTACCTTTATGAGGACATGACCTTGGCCCTAGATAGGAAGATATGGCGGTCAAAAATTAGGGTAGAAGGTCAGTAGGTCGAACATTGTCTTGTTCTCTCTTACTGTCTTATTCGATTTTAGTATTACATGATTTTTCATTTGCTAACAGCTACCGTTATTTTAAATTTTTTGGTGTTGCTATTGCTCTCTTTATTGATTTCAGCATGACTTTGATTTTAGGATTACATTATTGTATTTGCTTTGCATACTTGTTTTTTATATGCTTTACCTGTGTCGTTTATCTGGTAGATACAACCTCTCTACCTTTCAAAAGGTAGGGGTAAGGCCGTGTACACACCATCCTCCTCAGACCCCACTTGTGGGATTATAACTGGCCCAGTTGAGCTGGGTATGTTTTTATTGGATCTCCAGATGAAGACCAGACAATACTTTTCTTGACAAATTGCTTTACGTGGAAGGCTGCTGATACTGCATTAGTTGCTTACATTTGGTTTTCACTAGACATCTTTTTCATATTATACATAAATATGCAGGCTACACTAGAAACTACTATATAGAATTGGATAATCCGTAGTGAATAAATTTATCTTGGGTCTGTTTTGTTTTCTCACTCCATGTAGCATGGGCACTTTATTAGATACATATTCAAGTATAGTTTAAGGCTCCACCTGCAAGGACTTTTTTAACTTTAACTTCTTCCAATTTTTGCAAAGTGGACTATTTGTTAAATCAAAAGTAGATATATATTAGCAGCTTCAAAAAAAAAAAGTAGATGTATATTAGAATCTAGCTATTAGTAGTCCTTTGTAATTATAATGATGAACAACAATATATTTTCCTAATCATATGTTAGTCGACTTACTAGTTAATTAACTAAATAGTTCTTATTGTATCCTCAGGCTACGTTCCTTTGAGGTCTACTTTGATATATAGGGTGAAATGGTAGGGCAAAGTGACAAGACACTGAAGAAAACAGCTATAAGAAGAAAAGATATGAAAGCAGATGAAGAATTAGTTCTCATAAACCAGTTAAAAAAAAGTCATGAGATTACCATTAAGTAGCTTATCTAGTAAAATTTGAGTCAGGGAGCAGGGAGCTGAACTATACACCACAGATAAAAATCAGTTCATAAAAAATTCAGCCAATTGGTTTATGAGAAAACTAATTCTTAAATAGTATGTAATAAATTTCACTAGTTCAAGAAATCCATTCTCACTTGCTGTCTATTTTTTCAGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTTAAGTCTGGTGCCTTCTAGTTGGAAGTATAGTATTTCCGTTAATCTGGCTGGGTGTGTGTCCATCCGATACTTGTGAAGTTTCCCATGGTCATGTTTTTAGTTCTTAAAAGATGTTAG</genome_strand>
        <mrna_strand>AACAGA-TTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTTAAGTCTGGTGCCTTCTAGTTGGAAGTATAGTATTTCCGTTAATCTGGCTGGGTGTGTGTCCATCCGATACTTGTGAAGTTTCCCATGGTCATGTTTTTAG-GAATAAAAGATGTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369041" ref_strand="+" ref_description="SGN-E369041 [TUS-25-L1](-)">
      <seq>tggatggtaaccccatcggtgaggtggatggagatggaggtgatgatgcatccaaccagaacacacttcctcggaatttgcttcgtttgagcagtacatcaccatcttcagattctcaactgaggaagaccccctataatgtggttcctctcgcttcacgatctgttggagttactgttagtccttcacggtttgcacctccgggacagcaagggcaaccttcaagtctccccccagtgtccttatctggaacgaacattgttgcctcctctccttctcctgtagcatcaggcggcacttcagcatttcgagatcggtttgcaagcccatgaaaatgggagttgtgctagttgttactcctcctgtcagctggctttctgttctctcaacctcattttaagtttcaactggctaatctatgaagctgtaaattattctgtagttccaaattggtcattcgctgtaacggtagcagtgacgatgcagtgtctttaagtctggtgccttctagttggaagtatagtatttccgttaatctggctgggtgtgtgtccatccgatacttgtgaagtttcccatggtcatgtttttagttcttaaaagatgttagaactgaatatcctatgtacatatattatgccattttgcttttaagtaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="100614" stop="104712"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100914" g_stop="101056" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="143" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103900" g_stop="104410" g_length="511"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="654" r_length="511" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="657" polyA_stop="675"/>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E369041" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369041" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100914" e_stop="101056"/>
          <exon e_start="103900" e_stop="104410"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTGGTAAGTGCCCTATCTATGCGTGCATTGTTACCTTTGGCTTTCATTTGTGGCGCTACACCACCAGGAGTGGAAAAAGAGGGCTTTAATTTTTGTTTCTAATATAATTAATCTAGCAAAGATTTAAAAAGTTTTAAGTAAAGCAACAACATTCAATATGTGCAAGACTGCAAGTTAGTTCATCATATTATTGCTGGTTCACTCCCTTGAACCAAGTCTTCTATTTATCTTCTTCCTCAATGGAGCAGATCTTAATTTTTCTTTCATAGAACCATGTCCAAGGCATCTCGAAATGTGTGCTCTTGGTAACATTTGCTGAAAATTAAGGACCCCATATTGAACTTCTATTGGACATGAGATTTTGTTACAATTGTGTCTCTGTAACTAGTTTTGAGCTGTTCCAATCATTTTCTGCCACTTGTTGGACTAATTGGACCTTGCAATAAATTATGTTGCTACTTTGCACATGCCATAATAAGGGTTAGTGCTTTGACTAAGGGAAGATGATATATGTATATATATATATATGTATATATATATATATTATCTTGTTGTTGCATCAATGGAGAAGTTTATGTGCTATTTTACCTTGTTAATACTAGTTGTAAGAGCAAAAATTACTTTGTGGCCATTTTCTTCAGTGCAAACTGGGAATCAACATGTGGGATGAGGGATTATTGGAGTTATATATCAGCCTTCAACCACTTCCCCTTGATGTGAAATTTTCAGTCCCCTTTCTTTGTGAATAATGGAGTTCCAGAGAATGTACGATGTTCGGAGACTTGAACCAAGAGGTGCATCCTTAGATTACGTTAGGGCAATTAAATACATGTACTATGGAGCAAGGAAACTCAGATCACTTCTCGTTGTGATGGGGTTGCACCAGGGATCGACACATAGCCCATTTCTAGTTACTAACACGACTTATCCTAGGAAAAGTCCATGATATATGCTCTTTGCAGATGACAATGTGGTAATGAGACCAGGACAGAGTTAACAATAGGTGCCTTAACAATATATTGGAAATTTGAGGACAGACGTTGGAGTATAAAGAGTCTGGGTTGAGTAGGACTTAGACAAAATACTTGAAGTTCAAGTTCAATGACGTAAAACACATGGTAGATGTGGAAGTAAGGATTGAAACAAGCAGGGATCAATGATTCAGGAAAATAAGGAGATAGACGAAGATGTTACACATTGTATTGGAGCAGGTGGATGACGTTCACTGTCTTTTATGATAAGATTGTACCACCAAAGCCTTAAGGTAGGTATTACAAAGTGGTGGTCAGACTAGCTATGGACAGAGTGTTGACTAGACAAGAACTCGCATGTATAGAAGATGAGAGTAGTAGAAATGAGAATGTTGAGTTGGATGTTTGGGCATACTAAGATTGAGATTAGGAATGAAGCTATACGCGACATTGTGGGATAGGGCGCCTTGGTGAACAAGATGAGGCATGTGAAGCTGAGATGGTTCGAACATGTGAAGGAAACATGCATGAATACCCCGATTAGGAGCGAGAGGTTGGCTATAGAGGATGTAACATGATGTAGAGGTAGACCGAGAAGTCTCAAAAGAAATGATTAGATAGGACATGACTCATGCAGCTTACCTTTATGAGGACATGACCTTGGCCCTAGATAGGAAGATATGGCGGTCAAAAATTAGGGTAGAAGGTCAGTAGGTCGAACATTGTCTTGTTCTCTCTTACTGTCTTATTCGATTTTAGTATTACATGATTTTTCATTTGCTAACAGCTACCGTTATTTTAAATTTTTTGGTGTTGCTATTGCTCTCTTTATTGATTTCAGCATGACTTTGATTTTAGGATTACATTATTGTATTTGCTTTGCATACTTGTTTTTTATATGCTTTACCTGTGTCGTTTATCTGGTAGATACAACCTCTCTACCTTTCAAAAGGTAGGGGTAAGGCCGTGTACACACCATCCTCCTCAGACCCCACTTGTGGGATTATAACTGGCCCAGTTGAGCTGGGTATGTTTTTATTGGATCTCCAGATGAAGACCAGACAATACTTTTCTTGACAAATTGCTTTACGTGGAAGGCTGCTGATACTGCATTAGTTGCTTACATTTGGTTTTCACTAGACATCTTTTTCATATTATACATAAATATGCAGGCTACACTAGAAACTACTATATAGAATTGGATAATCCGTAGTGAATAAATTTATCTTGGGTCTGTTTTGTTTTCTCACTCCATGTAGCATGGGCACTTTATTAGATACATATTCAAGTATAGTTTAAGGCTCCACCTGCAAGGACTTTTTTAACTTTAACTTCTTCCAATTTTTGCAAAGTGGACTATTTGTTAAATCAAAAGTAGATATATATTAGCAGCTTCAAAAAAAAAAAGTAGATGTATATTAGAATCTAGCTATTAGTAGTCCTTTGTAATTATAATGATGAACAACAATATATTTTCCTAATCATATGTTAGTCGACTTACTAGTTAATTAACTAAATAGTTCTTATTGTATCCTCAGGCTACGTTCCTTTGAGGTCTACTTTGATATATAGGGTGAAATGGTAGGGCAAAGTGACAAGACACTGAAGAAAACAGCTATAAGAAGAAAAGATATGAAAGCAGATGAAGAATTAGTTCTCATAAACCAGTTAAAAAAAAGTCATGAGATTACCATTAAGTAGCTTATCTAGTAAAATTTGAGTCAGGGAGCAGGGAGCTGAACTATACACCACAGATAAAAATCAGTTCATAAAAAATTCAGCCAATTGGTTTATGAGAAAACTAATTCTTAAATAGTATGTAATAAATTTCACTAGTTCAAGAAATCCATTCTCACTTGCTGTCTATTTTTTCAGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTTAAGTCTGGTGCCTTCTAGTTGGAAGTATAGTATTTCCGTTAATCTGGCTGGGTGTGTGTCCATCCGATACTTGTGAAGTTTCCCATGGTCATGTTTTTAGTTCTTAAAAGATGTTAGAACTGAATATCCTATGTACATATATTATGCCATTTTGCTTTTAA</genome_strand>
        <mrna_strand>TGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTTTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTTAAGTCTGGTGCCTTCTAGTTGGAAGTATAGTATTTCCGTTAATCTGGCTGGGTGTGTGTCCATCCGATACTTGTGAAGTTTCCCATGGTCATGTTTTTAGTTCTTAAAAGATGTTAGAACTGAATATCCTATGTACATATATTATGCCATTTTGCTTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E350169" ref_strand="+" ref_description="SGN-E350169 [cTOS-4-O19]">
      <seq>tgaggaagaccccctataatgtggttcctctcgcttcacgatctgttggagttactgttagtccttcacggtttgcacctccgggacagcaagggcaaccttcaagtctccccccagtgtccttatctggaacgaacattgttgcctcctctccttctcctgtagcatcaggcggcacttcagcatttcgagatcggtttgcaagcccatgaaaatgggagttgtgctagttgttactcctcctgtcagctggctttctgttctctcaacctcattctaagtttcaactggctaatctatgaagctgtaaattattctgtagttccaaattggtcattcgctgtaacggtagcagtgacgatgcagtgtctttaagtctggtgccttctagttggaagtatagtatttccgttaatctggctgggtgtgtgtccatccgatacttgtgaagtttcccatggtcatgtttttagttcttaaaagatgttagaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="100734" stop="104668"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101034" g_stop="101056" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="23" r_length="23" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843">
            <donor d_prob="0.934" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103900" g_stop="104372" g_length="473"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="496" r_length="473" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E350169" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E350169" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101034" e_stop="101056"/>
          <exon e_start="103900" e_stop="104372"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGGAAGACCCCCTATAATGTGGTAAGTGCCCTATCTATGCGTGCATTGTTACCTTTGGCTTTCATTTGTGGCGCTACACCACCAGGAGTGGAAAAAGAGGGCTTTAATTTTTGTTTCTAATATAATTAATCTAGCAAAGATTTAAAAAGTTTTAAGTAAAGCAACAACATTCAATATGTGCAAGACTGCAAGTTAGTTCATCATATTATTGCTGGTTCACTCCCTTGAACCAAGTCTTCTATTTATCTTCTTCCTCAATGGAGCAGATCTTAATTTTTCTTTCATAGAACCATGTCCAAGGCATCTCGAAATGTGTGCTCTTGGTAACATTTGCTGAAAATTAAGGACCCCATATTGAACTTCTATTGGACATGAGATTTTGTTACAATTGTGTCTCTGTAACTAGTTTTGAGCTGTTCCAATCATTTTCTGCCACTTGTTGGACTAATTGGACCTTGCAATAAATTATGTTGCTACTTTGCACATGCCATAATAAGGGTTAGTGCTTTGACTAAGGGAAGATGATATATGTATATATATATATATGTATATATATATATATTATCTTGTTGTTGCATCAATGGAGAAGTTTATGTGCTATTTTACCTTGTTAATACTAGTTGTAAGAGCAAAAATTACTTTGTGGCCATTTTCTTCAGTGCAAACTGGGAATCAACATGTGGGATGAGGGATTATTGGAGTTATATATCAGCCTTCAACCACTTCCCCTTGATGTGAAATTTTCAGTCCCCTTTCTTTGTGAATAATGGAGTTCCAGAGAATGTACGATGTTCGGAGACTTGAACCAAGAGGTGCATCCTTAGATTACGTTAGGGCAATTAAATACATGTACTATGGAGCAAGGAAACTCAGATCACTTCTCGTTGTGATGGGGTTGCACCAGGGATCGACACATAGCCCATTTCTAGTTACTAACACGACTTATCCTAGGAAAAGTCCATGATATATGCTCTTTGCAGATGACAATGTGGTAATGAGACCAGGACAGAGTTAACAATAGGTGCCTTAACAATATATTGGAAATTTGAGGACAGACGTTGGAGTATAAAGAGTCTGGGTTGAGTAGGACTTAGACAAAATACTTGAAGTTCAAGTTCAATGACGTAAAACACATGGTAGATGTGGAAGTAAGGATTGAAACAAGCAGGGATCAATGATTCAGGAAAATAAGGAGATAGACGAAGATGTTACACATTGTATTGGAGCAGGTGGATGACGTTCACTGTCTTTTATGATAAGATTGTACCACCAAAGCCTTAAGGTAGGTATTACAAAGTGGTGGTCAGACTAGCTATGGACAGAGTGTTGACTAGACAAGAACTCGCATGTATAGAAGATGAGAGTAGTAGAAATGAGAATGTTGAGTTGGATGTTTGGGCATACTAAGATTGAGATTAGGAATGAAGCTATACGCGACATTGTGGGATAGGGCGCCTTGGTGAACAAGATGAGGCATGTGAAGCTGAGATGGTTCGAACATGTGAAGGAAACATGCATGAATACCCCGATTAGGAGCGAGAGGTTGGCTATAGAGGATGTAACATGATGTAGAGGTAGACCGAGAAGTCTCAAAAGAAATGATTAGATAGGACATGACTCATGCAGCTTACCTTTATGAGGACATGACCTTGGCCCTAGATAGGAAGATATGGCGGTCAAAAATTAGGGTAGAAGGTCAGTAGGTCGAACATTGTCTTGTTCTCTCTTACTGTCTTATTCGATTTTAGTATTACATGATTTTTCATTTGCTAACAGCTACCGTTATTTTAAATTTTTTGGTGTTGCTATTGCTCTCTTTATTGATTTCAGCATGACTTTGATTTTAGGATTACATTATTGTATTTGCTTTGCATACTTGTTTTTTATATGCTTTACCTGTGTCGTTTATCTGGTAGATACAACCTCTCTACCTTTCAAAAGGTAGGGGTAAGGCCGTGTACACACCATCCTCCTCAGACCCCACTTGTGGGATTATAACTGGCCCAGTTGAGCTGGGTATGTTTTTATTGGATCTCCAGATGAAGACCAGACAATACTTTTCTTGACAAATTGCTTTACGTGGAAGGCTGCTGATACTGCATTAGTTGCTTACATTTGGTTTTCACTAGACATCTTTTTCATATTATACATAAATATGCAGGCTACACTAGAAACTACTATATAGAATTGGATAATCCGTAGTGAATAAATTTATCTTGGGTCTGTTTTGTTTTCTCACTCCATGTAGCATGGGCACTTTATTAGATACATATTCAAGTATAGTTTAAGGCTCCACCTGCAAGGACTTTTTTAACTTTAACTTCTTCCAATTTTTGCAAAGTGGACTATTTGTTAAATCAAAAGTAGATATATATTAGCAGCTTCAAAAAAAAAAAGTAGATGTATATTAGAATCTAGCTATTAGTAGTCCTTTGTAATTATAATGATGAACAACAATATATTTTCCTAATCATATGTTAGTCGACTTACTAGTTAATTAACTAAATAGTTCTTATTGTATCCTCAGGCTACGTTCCTTTGAGGTCTACTTTGATATATAGGGTGAAATGGTAGGGCAAAGTGACAAGACACTGAAGAAAACAGCTATAAGAAGAAAAGATATGAAAGCAGATGAAGAATTAGTTCTCATAAACCAGTTAAAAAAAAGTCATGAGATTACCATTAAGTAGCTTATCTAGTAAAATTTGAGTCAGGGAGCAGGGAGCTGAACTATACACCACAGATAAAAATCAGTTCATAAAAAATTCAGCCAATTGGTTTATGAGAAAACTAATTCTTAAATAGTATGTAATAAATTTCACTAGTTCAAGAAATCCATTCTCACTTGCTGTCTATTTTTTCAGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTTAAGTCTGGTGCCTTCTAGTTGGAAGTATAGTATTTCCGTTAATCTGGCTGGGTGTGTGTCCATCCGATACTTGTGAAGTTTCCCATGGTCATGTTTTTAGTTCTTAAAAGATGTTAGAACTGA</genome_strand>
        <mrna_strand>TGAGGAAGACCCCCTATAATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTTAAGTCTGGTGCCTTCTAGTTGGAAGTATAGTATTTCCGTTAATCTGGCTGGGTGTGTGTCCATCCGATACTTGTGAAGTTTCCCATGGTCATGTTTTTAGTTCTTAAAAGATGTTAGAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E350908" ref_strand="+" ref_description="SGN-E350908 [cTOS-7-H13]">
      <seq>tgaggaagaccccctataatgtggttcctctcgcttcacgatctgttggagttactgttagtccttcacggtttgcacctccgggacagcaagggcaaccttcaagtctccccccagtgtccttatctggaacgaacattgttgcctcctctccttctcctgtagcatcaggcggcacttcagcatttcgagatcggtttgcaagcccatgaaaatgggagttgtgctagttgttactcctcctgtcagctggctttctgttctctcaacctcattctaagtttcaactggctaatctatgaagctgtaaattattctgtagttccaaattggtcattcgctgtaacggtagcagtgacgatgcagtgtctttaagtctggtgccttctagttggaagtatagtatttccgttaatctggctgggtgtgtgtccatccgatacttgtgaagtttcccatggtcatgtttttagttcttaaaagatgttagaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="100734" stop="104668"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101034" g_stop="101056" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="23" r_length="23" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843">
            <donor d_prob="0.934" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103900" g_stop="104372" g_length="473"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="496" r_length="473" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E350908" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E350908" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101034" e_stop="101056"/>
          <exon e_start="103900" e_stop="104372"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGGAAGACCCCCTATAATGTGGTAAGTGCCCTATCTATGCGTGCATTGTTACCTTTGGCTTTCATTTGTGGCGCTACACCACCAGGAGTGGAAAAAGAGGGCTTTAATTTTTGTTTCTAATATAATTAATCTAGCAAAGATTTAAAAAGTTTTAAGTAAAGCAACAACATTCAATATGTGCAAGACTGCAAGTTAGTTCATCATATTATTGCTGGTTCACTCCCTTGAACCAAGTCTTCTATTTATCTTCTTCCTCAATGGAGCAGATCTTAATTTTTCTTTCATAGAACCATGTCCAAGGCATCTCGAAATGTGTGCTCTTGGTAACATTTGCTGAAAATTAAGGACCCCATATTGAACTTCTATTGGACATGAGATTTTGTTACAATTGTGTCTCTGTAACTAGTTTTGAGCTGTTCCAATCATTTTCTGCCACTTGTTGGACTAATTGGACCTTGCAATAAATTATGTTGCTACTTTGCACATGCCATAATAAGGGTTAGTGCTTTGACTAAGGGAAGATGATATATGTATATATATATATATGTATATATATATATATTATCTTGTTGTTGCATCAATGGAGAAGTTTATGTGCTATTTTACCTTGTTAATACTAGTTGTAAGAGCAAAAATTACTTTGTGGCCATTTTCTTCAGTGCAAACTGGGAATCAACATGTGGGATGAGGGATTATTGGAGTTATATATCAGCCTTCAACCACTTCCCCTTGATGTGAAATTTTCAGTCCCCTTTCTTTGTGAATAATGGAGTTCCAGAGAATGTACGATGTTCGGAGACTTGAACCAAGAGGTGCATCCTTAGATTACGTTAGGGCAATTAAATACATGTACTATGGAGCAAGGAAACTCAGATCACTTCTCGTTGTGATGGGGTTGCACCAGGGATCGACACATAGCCCATTTCTAGTTACTAACACGACTTATCCTAGGAAAAGTCCATGATATATGCTCTTTGCAGATGACAATGTGGTAATGAGACCAGGACAGAGTTAACAATAGGTGCCTTAACAATATATTGGAAATTTGAGGACAGACGTTGGAGTATAAAGAGTCTGGGTTGAGTAGGACTTAGACAAAATACTTGAAGTTCAAGTTCAATGACGTAAAACACATGGTAGATGTGGAAGTAAGGATTGAAACAAGCAGGGATCAATGATTCAGGAAAATAAGGAGATAGACGAAGATGTTACACATTGTATTGGAGCAGGTGGATGACGTTCACTGTCTTTTATGATAAGATTGTACCACCAAAGCCTTAAGGTAGGTATTACAAAGTGGTGGTCAGACTAGCTATGGACAGAGTGTTGACTAGACAAGAACTCGCATGTATAGAAGATGAGAGTAGTAGAAATGAGAATGTTGAGTTGGATGTTTGGGCATACTAAGATTGAGATTAGGAATGAAGCTATACGCGACATTGTGGGATAGGGCGCCTTGGTGAACAAGATGAGGCATGTGAAGCTGAGATGGTTCGAACATGTGAAGGAAACATGCATGAATACCCCGATTAGGAGCGAGAGGTTGGCTATAGAGGATGTAACATGATGTAGAGGTAGACCGAGAAGTCTCAAAAGAAATGATTAGATAGGACATGACTCATGCAGCTTACCTTTATGAGGACATGACCTTGGCCCTAGATAGGAAGATATGGCGGTCAAAAATTAGGGTAGAAGGTCAGTAGGTCGAACATTGTCTTGTTCTCTCTTACTGTCTTATTCGATTTTAGTATTACATGATTTTTCATTTGCTAACAGCTACCGTTATTTTAAATTTTTTGGTGTTGCTATTGCTCTCTTTATTGATTTCAGCATGACTTTGATTTTAGGATTACATTATTGTATTTGCTTTGCATACTTGTTTTTTATATGCTTTACCTGTGTCGTTTATCTGGTAGATACAACCTCTCTACCTTTCAAAAGGTAGGGGTAAGGCCGTGTACACACCATCCTCCTCAGACCCCACTTGTGGGATTATAACTGGCCCAGTTGAGCTGGGTATGTTTTTATTGGATCTCCAGATGAAGACCAGACAATACTTTTCTTGACAAATTGCTTTACGTGGAAGGCTGCTGATACTGCATTAGTTGCTTACATTTGGTTTTCACTAGACATCTTTTTCATATTATACATAAATATGCAGGCTACACTAGAAACTACTATATAGAATTGGATAATCCGTAGTGAATAAATTTATCTTGGGTCTGTTTTGTTTTCTCACTCCATGTAGCATGGGCACTTTATTAGATACATATTCAAGTATAGTTTAAGGCTCCACCTGCAAGGACTTTTTTAACTTTAACTTCTTCCAATTTTTGCAAAGTGGACTATTTGTTAAATCAAAAGTAGATATATATTAGCAGCTTCAAAAAAAAAAAGTAGATGTATATTAGAATCTAGCTATTAGTAGTCCTTTGTAATTATAATGATGAACAACAATATATTTTCCTAATCATATGTTAGTCGACTTACTAGTTAATTAACTAAATAGTTCTTATTGTATCCTCAGGCTACGTTCCTTTGAGGTCTACTTTGATATATAGGGTGAAATGGTAGGGCAAAGTGACAAGACACTGAAGAAAACAGCTATAAGAAGAAAAGATATGAAAGCAGATGAAGAATTAGTTCTCATAAACCAGTTAAAAAAAAGTCATGAGATTACCATTAAGTAGCTTATCTAGTAAAATTTGAGTCAGGGAGCAGGGAGCTGAACTATACACCACAGATAAAAATCAGTTCATAAAAAATTCAGCCAATTGGTTTATGAGAAAACTAATTCTTAAATAGTATGTAATAAATTTCACTAGTTCAAGAAATCCATTCTCACTTGCTGTCTATTTTTTCAGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTTAAGTCTGGTGCCTTCTAGTTGGAAGTATAGTATTTCCGTTAATCTGGCTGGGTGTGTGTCCATCCGATACTTGTGAAGTTTCCCATGGTCATGTTTTTAGTTCTTAAAAGATGTTAGAACTGA</genome_strand>
        <mrna_strand>TGAGGAAGACCCCCTATAATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTTAAGTCTGGTGCCTTCTAGTTGGAAGTATAGTATTTCCGTTAATCTGGCTGGGTGTGTGTCCATCCGATACTTGTGAAGTTTCCCATGGTCATGTTTTTAGTTCTTAAAAGATGTTAGAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E351777" ref_strand="+" ref_description="SGN-E351777 [cTOS-8-L4]">
      <seq>tgaggaagaccccctataatgtggttcctctcgcttcacgatctgttggagttactgttagtccttcacggtttgcacctccgggacagcaagggcaaccttcaagtctccccccagtgtccttatctggaacgaacattgttgcctcctctccttctcctgtagcatcaggcggcacttcagcatttcgagatcggtttgcaagcccatgaaaatgggagttgtgctagttgttactcctcctgtcagctggctttctgttctctcaacctcattctaagtttcaactgggctaatctatgaagctgtaaatttattctgtag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="100734" stop="104498"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101034" g_stop="101056" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="23" r_length="23" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843">
            <donor d_prob="0.934" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103900" g_stop="104198" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="324" r_length="301" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E351777" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>322</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351777" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101034" e_stop="101056"/>
          <exon e_start="103900" e_stop="104198"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGGAAGACCCCCTATAATGTGGTAAGTGCCCTATCTATGCGTGCATTGTTACCTTTGGCTTTCATTTGTGGCGCTACACCACCAGGAGTGGAAAAAGAGGGCTTTAATTTTTGTTTCTAATATAATTAATCTAGCAAAGATTTAAAAAGTTTTAAGTAAAGCAACAACATTCAATATGTGCAAGACTGCAAGTTAGTTCATCATATTATTGCTGGTTCACTCCCTTGAACCAAGTCTTCTATTTATCTTCTTCCTCAATGGAGCAGATCTTAATTTTTCTTTCATAGAACCATGTCCAAGGCATCTCGAAATGTGTGCTCTTGGTAACATTTGCTGAAAATTAAGGACCCCATATTGAACTTCTATTGGACATGAGATTTTGTTACAATTGTGTCTCTGTAACTAGTTTTGAGCTGTTCCAATCATTTTCTGCCACTTGTTGGACTAATTGGACCTTGCAATAAATTATGTTGCTACTTTGCACATGCCATAATAAGGGTTAGTGCTTTGACTAAGGGAAGATGATATATGTATATATATATATATGTATATATATATATATTATCTTGTTGTTGCATCAATGGAGAAGTTTATGTGCTATTTTACCTTGTTAATACTAGTTGTAAGAGCAAAAATTACTTTGTGGCCATTTTCTTCAGTGCAAACTGGGAATCAACATGTGGGATGAGGGATTATTGGAGTTATATATCAGCCTTCAACCACTTCCCCTTGATGTGAAATTTTCAGTCCCCTTTCTTTGTGAATAATGGAGTTCCAGAGAATGTACGATGTTCGGAGACTTGAACCAAGAGGTGCATCCTTAGATTACGTTAGGGCAATTAAATACATGTACTATGGAGCAAGGAAACTCAGATCACTTCTCGTTGTGATGGGGTTGCACCAGGGATCGACACATAGCCCATTTCTAGTTACTAACACGACTTATCCTAGGAAAAGTCCATGATATATGCTCTTTGCAGATGACAATGTGGTAATGAGACCAGGACAGAGTTAACAATAGGTGCCTTAACAATATATTGGAAATTTGAGGACAGACGTTGGAGTATAAAGAGTCTGGGTTGAGTAGGACTTAGACAAAATACTTGAAGTTCAAGTTCAATGACGTAAAACACATGGTAGATGTGGAAGTAAGGATTGAAACAAGCAGGGATCAATGATTCAGGAAAATAAGGAGATAGACGAAGATGTTACACATTGTATTGGAGCAGGTGGATGACGTTCACTGTCTTTTATGATAAGATTGTACCACCAAAGCCTTAAGGTAGGTATTACAAAGTGGTGGTCAGACTAGCTATGGACAGAGTGTTGACTAGACAAGAACTCGCATGTATAGAAGATGAGAGTAGTAGAAATGAGAATGTTGAGTTGGATGTTTGGGCATACTAAGATTGAGATTAGGAATGAAGCTATACGCGACATTGTGGGATAGGGCGCCTTGGTGAACAAGATGAGGCATGTGAAGCTGAGATGGTTCGAACATGTGAAGGAAACATGCATGAATACCCCGATTAGGAGCGAGAGGTTGGCTATAGAGGATGTAACATGATGTAGAGGTAGACCGAGAAGTCTCAAAAGAAATGATTAGATAGGACATGACTCATGCAGCTTACCTTTATGAGGACATGACCTTGGCCCTAGATAGGAAGATATGGCGGTCAAAAATTAGGGTAGAAGGTCAGTAGGTCGAACATTGTCTTGTTCTCTCTTACTGTCTTATTCGATTTTAGTATTACATGATTTTTCATTTGCTAACAGCTACCGTTATTTTAAATTTTTTGGTGTTGCTATTGCTCTCTTTATTGATTTCAGCATGACTTTGATTTTAGGATTACATTATTGTATTTGCTTTGCATACTTGTTTTTTATATGCTTTACCTGTGTCGTTTATCTGGTAGATACAACCTCTCTACCTTTCAAAAGGTAGGGGTAAGGCCGTGTACACACCATCCTCCTCAGACCCCACTTGTGGGATTATAACTGGCCCAGTTGAGCTGGGTATGTTTTTATTGGATCTCCAGATGAAGACCAGACAATACTTTTCTTGACAAATTGCTTTACGTGGAAGGCTGCTGATACTGCATTAGTTGCTTACATTTGGTTTTCACTAGACATCTTTTTCATATTATACATAAATATGCAGGCTACACTAGAAACTACTATATAGAATTGGATAATCCGTAGTGAATAAATTTATCTTGGGTCTGTTTTGTTTTCTCACTCCATGTAGCATGGGCACTTTATTAGATACATATTCAAGTATAGTTTAAGGCTCCACCTGCAAGGACTTTTTTAACTTTAACTTCTTCCAATTTTTGCAAAGTGGACTATTTGTTAAATCAAAAGTAGATATATATTAGCAGCTTCAAAAAAAAAAAGTAGATGTATATTAGAATCTAGCTATTAGTAGTCCTTTGTAATTATAATGATGAACAACAATATATTTTCCTAATCATATGTTAGTCGACTTACTAGTTAATTAACTAAATAGTTCTTATTGTATCCTCAGGCTACGTTCCTTTGAGGTCTACTTTGATATATAGGGTGAAATGGTAGGGCAAAGTGACAAGACACTGAAGAAAACAGCTATAAGAAGAAAAGATATGAAAGCAGATGAAGAATTAGTTCTCATAAACCAGTTAAAAAAAAGTCATGAGATTACCATTAAGTAGCTTATCTAGTAAAATTTGAGTCAGGGAGCAGGGAGCTGAACTATACACCACAGATAAAAATCAGTTCATAAAAAATTCAGCCAATTGGTTTATGAGAAAACTAATTCTTAAATAGTATGTAATAAATTTCACTAGTTCAAGAAATCCATTCTCACTTGCTGTCTATTTTTTCAGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACT-GGCTAATCTATGAAGCTGTAAA-TTATTCTGTAG</genome_strand>
        <mrna_strand>TGAGGAAGACCCCCTATAATGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGGCTAATCTATGAAGCTGTAAATTTATTCTGTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E376545" ref_strand="+" ref_description="SGN-E376545 [TUS-17-J23](-)">
      <seq>tggttcctctcgcttcacgatctgttggagttactgttagtccttcacggtttgcacctccgggacagcaagggcaaccttcaagtctccccccagtgtccttatttggaaagaacattgttgcctcctctccttttcctgtagcatcaggcggcacttcagcattttgagatcggtttgcaagcccatgaaaatgggagttgtgctagttgttactcctcctgtcagctggctttttgttctttcaacctcattttaagtttcaactgggtaatttatgaagctgtaaattattttgtagttccaaattggtcattcgctgtaacggtaacagtgacgatgcagtgtctttaagtttggtgccttttagttggaagtatagtatttccgttaatctgggtgggtgtgtgtccatccgatacttgtgaagtttcccatggtcatgtttttagtttttaaaaaatgttagaactgaatatcctatgtacatatattatgccattttgcttttaagtcgtttagttgtattaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0002C17-0oP1n/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0002C17.2" temp_strand="+" temp_description="C06HBa0002C17.2  AC211019.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0002C17 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="103599" stop="104727"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103898" g_stop="104426" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="529" r_length="529" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="530" polyA_stop="563"/>
      <MATCH_line gen_id="C06HBa0002C17.2" gen_strand="+" ref_id="SGN-E376545" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0002C17.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E376545" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103898" e_stop="104426"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTTAAGTCTGGTGCCTTCTAGTTGGAAGTATAGTATTTCCGTTAATCTGGCTGGGTGTGTGTCCATCCGATACTTGTGAAGTTTCCCATGGTCATGTTTTTAGTTCTTAAAAGATGTTAGAACTGAATATCCTATGTACATATATTATGCCATTTTGCTTTTAAGTCGTTAAGTTGTATT</genome_strand>
        <mrna_strand>TGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATTTGGAAAGAACATTGTTGCCTCCTCTCCTTTTCCTGTAGCATCAGGCGGCACTTCAGCATTTTGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTTTGTTCTTTCAACCTCATTTTAAGTTTCAACTGGGTAATTTATGAAGCTGTAAATTATTTTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAACAGTGACGATGCAGTGTCTTTAAGTTTGGTGCCTTTTAGTTGGAAGTATAGTATTTCCGTTAATCTGGGTGGGTGTGTGTCCATCCGATACTTGTGAAGTTTCCCATGGTCATGTTTTTAGTTTTTAAAAAATGTTAGAACTGAATATCCTATGTACATATATTATGCCATTTTGCTTTTAAGTCGTTTAGTTGTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>154</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="8855" PGL_stop="6583"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8855" e_stop="8511"/>
            <exon e_start="7607" e_stop="7372"/>
            <exon e_start="7289" e_stop="6999"/>
            <exon e_start="6889" e_stop="6761"/>
            <exon e_start="6677" e_stop="6583"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.953" acc_prob="0.999" e_score="0.965"/>
          <exon-intron don_prob="0.969" acc_prob="0.994" e_score="0.979"/>
          <exon-intron don_prob="0.000" acc_prob="0.996" e_score="0.962"/>
          <exon-intron don_prob="0.139" acc_prob="0.998" e_score="0.992"/>
          <exon-only e_score="0.968"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.965">
            <gDNA_exon_boundary e_start="8855" e_stop="8511" e_length="345"/>
          </exon>
          <intron i_serial="1" don_prob="0.953" acc_prob="0.999">
            <gDNA_intron_boundary i_start="8510" i_stop="7608" i_length="903"/>
          </intron>
          <exon e_serial="2" e_score="0.979">
            <gDNA_exon_boundary e_start="7607" e_stop="7372" e_length="236"/>
          </exon>
          <intron i_serial="2" don_prob="0.969" acc_prob="0.994">
            <gDNA_intron_boundary i_start="7371" i_stop="7290" i_length="82"/>
          </intron>
          <exon e_serial="3" e_score="0.962">
            <gDNA_exon_boundary e_start="7289" e_stop="6999" e_length="291"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="6998" i_stop="6890" i_length="109"/>
          </intron>
          <exon e_serial="4" e_score="0.992">
            <gDNA_exon_boundary e_start="6889" e_stop="6761" e_length="129"/>
          </exon>
          <intron i_serial="4" don_prob="0.139" acc_prob="0.998">
            <gDNA_intron_boundary i_start="6760" i_stop="6678" i_length="83"/>
          </intron>
          <exon e_serial="5" e_score="0.968">
            <gDNA_exon_boundary e_start="6677" e_stop="6583" e_length="95"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8855" stop="8511"/>
              <exon start="7607" stop="7372"/>
              <exon start="7289" stop="7074"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E571879" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7603" stop="7372"/>
              <exon start="7289" stop="6999"/>
              <exon start="6889" stop="6761"/>
              <exon start="6677" stop="6583"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480247" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7603" stop="7372"/>
              <exon start="7289" stop="6999"/>
              <exon start="6889" stop="6761"/>
              <exon start="6677" stop="6608"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E428517" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTGAGTTTTTGGGGAAAGGGAGAATGATGGTGTTGCCATGTGGGCTTACTCTTGGTTCACATATAACTGTTGTGGGTAAACCGAGAAGGGCTCATCAGGAGCGTGATCCAAAGATATCACTGCTGAGGGAAGGTCAATTCTTGATGGTTTCACAGTTTATGATGGAGTTGCAAGGTCTAAAGACTGTTGATGGGGAGGACCCACCTAGGATTCTTCACTTCAACCCACGGTTGAGTGGTGATTGGAGCGGGAAGCCGATGATTGAGCAGAACACTTGTTATAGGATGCAGTGGGGAACGGCTCAAAGGTGTGATGGGTGGAGGTCCAGGGATGATGAGGAGACTG : TTGATGGCCAGGTAAAGTGTGAGAAGTGGATCCGAGATAATGACACCAACCATTCGGAGCAATCAAAGGCATCTTGGTGGTTAAACCGGCTTGTAGGGCGAAAAAAGAAGGTCGATTTTGATTGGCCATTCCCATTTTCAGAGGATAGGTTATTTGTTCTAACTCTCAGTGCCGGTTTTGAGGGTTATCACGTGAACGTTGATGGGAGGCATGTGACCTCATTTCCATATCGAATT : GGATTTGCGCTCGAGGATGCCACTGGTTTGTCTTTGAATGGTGATATTGATGTCGATTCAGTCTTTGCTGCCTCCTTGCCCACATCACATCCTAGTTTTGCTCCTCAAAGGCATCTTGATATGTCAAATAGATGGAAGACACCACCCCTTCTTGATCAGCCTGTGGATCTGTTCATTGGCATTCTGTCGGCAGGCAATCACTTTGCTGAGCGAATGGCTATAAGGAGGTCTTGGCTGCAGCACCAGCTCATCAAATCTTCGAATGTTGTGGCTCGATTTTTTGTCGCGTTG : CACGCTAGGAAGGATATAAACGTGGAGTTGAAGAAAGAAGCACAATTCTTTGGTGACATTGTCATTGTTCCTTTCATGGACAATTATGATCTTGTTGTCTTGAAAACAGTTGCCATCTGCGAATATGGG : GTCCATGTAGCATTTGCAAAAAATATCATGAAGTGTGATGATGATACATTTGTTAGAGTGGATGCGGTTATCAAGGAAATAAATAAGATACCCGA</gDNA_template>
            <first_frame> L  S  F  W  G  K  G  E  *  W  C  C  H  V  G  L  L  L  V  H  I  *  L  L  W  V  N  R  E  G  L  I  R  S  V  I  Q  R  Y  H  C  *  G  K  V  N  S  *  W  F  H  S  L  *  W  S  C  K  V  *  R  L  L  M  G  R  T  H  L  G  F  F  T  S  T  H  G  *  V  V  I  G  A  G  S  R  *  L  S  R  T  L  V  I  G  C  S  G  E  R  L  K  G  V  M  G  G  G  P  G  M  M  R  R  L  :  L  M  A  R  *  S  V  R  S  G  S  E  I  M  T  P  T  I  R  S  N  Q  R  H  L  G  G  *  T  G  L  *  G  E  K  R  R  S  I  L  I  G  H  S  H  F  Q  R  I  G  Y  L  F  *  L  S  V  P  V  L  R  V  I  T  *  T  L  M  G  G  M  *  P  H  F  H  I  E  L :   D  L  R  S  R  M  P  L  V  C  L  *  M  V  I  L  M  S  I  Q  S  L  L  P  P  C  P  H  H  I  L  V  L  L  L  K  G  I  L  I  C  Q  I  D  G  R  H  H  P  F  L  I  S  L  W  I  C  S  L  A  F  C  R  Q  A  I  T  L  L  S  E  W  L  *  G  G  L  G  C  S  T  S  S  S  N  L  R  M  L  W  L  D  F  L  S  R  C :   T  L  G  R  I  *  T  W  S  *  R  K  K  H  N  S  L  V  T  L  S  L  F  L  S  W  T  I  M  I  L  L  S  *  K  Q  L  P  S  A  N  M  G :   S  M  *  H  L  Q  K  I  S  *  S  V  M  M  I  H  L  L  E  W  M  R  L  S  R  K  *  I  R  Y  P  </first_frame>
            <second_frame>  *  V  F  G  E  R  E  N  D  G  V  A  M  W  A  Y  S  W  F  T  Y  N  C  C  G  *  T  E  K  G  S  S  G  A  *  S  K  D  I  T  A  E  G  R  S  I  L  D  G  F  T  V  Y  D  G  V  A  R  S  K  D  C  *  W  G  G  P  T  *  D  S  S  L  Q  P  T  V  E  W  *  L  E  R  E  A  D  D  *  A  E  H  L  L  *  D  A  V  G  N  G  S  K  V  *  W  V  E  V  Q  G  *  *  G  D  C :   *  W  P  G  K  V  *  E  V  D  P  R  *  *  H  Q  P  F  G  A  I  K  G  I  L  V  V  K  P  A  C  R  A  K  K  E  G  R  F  *  L  A  I  P  I  F  R  G  *  V  I  C  S  N  S  Q  C  R  F  *  G  L  S  R  E  R  *  W  E  A  C  D  L  I  S  I  S  N   : W  I  C  A  R  G  C  H  W  F  V  F  E  W  *  Y  *  C  R  F  S  L  C  C  L  L  A  H  I  T  S  *  F  C  S  S  K  A  S  *  Y  V  K  *  M  E  D  T  T  P  S  *  S  A  C  G  S  V  H  W  H  S  V  G  R  Q  S  L  C  *  A  N  G  Y  K  E  V  L  A  A  A  P  A  H  Q  I  F  E  C  C  G  S  I  F  C  R  V   : A  R  *  E  G  Y  K  R  G  V  E  E  R  S  T  I  L  W  *  H  C  H  C  S  F  H  G  Q  L  *  S  C  C  L  E  N  S  C  H  L  R  I  W   : G  P  C  S  I  C  K  K  Y  H  E  V  *  *  *  Y  I  C  *  S  G  C  G  Y  Q  G  N  K  *  D  T  R </second_frame>
            <third_frame>   E  F  L  G  K  G  R  M  M  V  L  P  C  G  L  T  L  G  S  H  I  T  V  V  G  K  P  R  R  A  H  Q  E  R  D  P  K  I  S  L  L  R  E  G  Q  F  L  M  V  S  Q  F  M  M  E  L  Q  G  L  K  T  V  D  G  E  D  P  P  R  I  L  H  F  N  P  R  L  S  G  D  W  S  G  K  P  M  I  E  Q  N  T  C  Y  R  M  Q  W  G  T  A  Q  R  C  D  G  W  R  S  R  D  D  E  E  T   : V  D  G  Q  V  K  C  E  K  W  I  R  D  N  D  T  N  H  S  E  Q  S  K  A  S  W  W  L  N  R  L  V  G  R  K  K  K  V  D  F  D  W  P  F  P  F  S  E  D  R  L  F  V  L  T  L  S  A  G  F  E  G  Y  H  V  N  V  D  G  R  H  V  T  S  F  P  Y  R  I  :  G  F  A  L  E  D  A  T  G  L  S  L  N  G  D  I  D  V  D  S  V  F  A  A  S  L  P  T  S  H  P  S  F  A  P  Q  R  H  L  D  M  S  N  R  W  K  T  P  P  L  L  D  Q  P  V  D  L  F  I  G  I  L  S  A  G  N  H  F  A  E  R  M  A  I  R  R  S  W  L  Q  H  Q  L  I  K  S  S  N  V  V  A  R  F  F  V  A  L  :  H  A  R  K  D  I  N  V  E  L  K  K  E  A  Q  F  F  G  D  I  V  I  V  P  F  M  D  N  Y  D  L  V  V  L  K  T  V  A  I  C  E  Y  G  :  V  H  V  A  F  A  K  N  I  M  K  C  D  D  D  T  F  V  R  V  D  A  V  I  K  E  I  N  K  I  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8853" stop="8511"/>
                    <exon start="7607" stop="7372"/>
                    <exon start="7289" stop="6999"/>
                    <exon start="6889" stop="6761"/>
                    <exon start="6677" stop="6585"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1092</number_coding_nucleotides>
                  <number_encoded_amino_acids>364</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EFLGKGRMMVLPCGLTLGSHITVVGKPRRAHQERDPKISLLREGQFLMVSQFMMELQGLKTVDGEDPPRILHFNPRLSGDWSGKPMIEQNTCYRMQWGTAQRCDGWRSRDDEETVDGQVKCEKWIRDNDTNHSEQSKASWWLNRLVGRKKKVDFDWPFPFSEDRLFVLTLSAGFEGYHVNVDGRHVTSFPYRIGFALEDATGLSLNGDIDVDSVFAASLPTSHPSFAPQRHLDMSNRWKTPPLLDQPVDLFIGILSAGNHFAERMAIRRSWLQHQLIKSSNVVARFFVALHARKDINVELKKEAQFFGDIVIVPFMDNYDLVVLKTVAICEYGVHVAFAKNIMKCDDDTFVRVDAVIKEINKIP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="12629" PGL_stop="15779"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="12629" e_stop="12650"/>
            <exon e_start="12744" e_stop="12813"/>
            <exon e_start="13028" e_stop="13109"/>
            <exon e_start="13215" e_stop="13624"/>
            <exon e_start="13729" e_stop="14205"/>
            <exon e_start="15272" e_stop="15779"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.862" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.979" e_score="0.971"/>
          <exon-intron don_prob="0.999" acc_prob="0.661" e_score="0.988"/>
          <exon-intron don_prob="0.996" acc_prob="0.996" e_score="0.954"/>
          <exon-intron don_prob="0.999" acc_prob="0.994" e_score="0.966"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="12629" e_stop="12650" e_length="22"/>
          </exon>
          <intron i_serial="1" don_prob="0.862" acc_prob="0.996">
            <gDNA_intron_boundary i_start="12651" i_stop="12743" i_length="93"/>
          </intron>
          <exon e_serial="2" e_score="0.971">
            <gDNA_exon_boundary e_start="12744" e_stop="12813" e_length="70"/>
          </exon>
          <intron i_serial="2" don_prob="0.988" acc_prob="0.979">
            <gDNA_intron_boundary i_start="12814" i_stop="13027" i_length="214"/>
          </intron>
          <exon e_serial="3" e_score="0.988">
            <gDNA_exon_boundary e_start="13028" e_stop="13109" e_length="82"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.661">
            <gDNA_intron_boundary i_start="13110" i_stop="13214" i_length="105"/>
          </intron>
          <exon e_serial="4" e_score="0.954">
            <gDNA_exon_boundary e_start="13215" e_stop="13624" e_length="410"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.996">
            <gDNA_intron_boundary i_start="13625" i_stop="13728" i_length="104"/>
          </intron>
          <exon e_serial="5" e_score="0.966">
            <gDNA_exon_boundary e_start="13729" e_stop="14205" e_length="477"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.994">
            <gDNA_intron_boundary i_start="14206" i_stop="15271" i_length="1066"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="15272" e_stop="15779" e_length="508"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12629" stop="12650"/>
              <exon start="12744" stop="12813"/>
              <exon start="13028" stop="13109"/>
              <exon start="13215" stop="13624"/>
              <exon start="13729" stop="13843"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E487250" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12629" stop="12650"/>
              <exon start="12744" stop="12813"/>
              <exon start="13028" stop="13109"/>
              <exon start="13215" stop="13553"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E427514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13548" stop="13624"/>
              <exon start="13729" stop="14068"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338765" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13610" stop="13624"/>
              <exon start="13729" stop="14205"/>
              <exon start="15272" stop="15337"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E486633" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14064" stop="14205"/>
              <exon start="15272" stop="15728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E454091" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14097" stop="14205"/>
              <exon start="15272" stop="15779"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712878" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14114" stop="14205"/>
              <exon start="15272" stop="15717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15272" stop="15762"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458770" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGAAGAGCCAGTAATGTTTAG : TCACCTGGGCCCCCCTCGAAGGCGGACGGCTGCAGAAGAGGAAGAAAGGATCAAAGACCCTAAACCTGAA : GACTCCGTTTATTATCACCCTACACTGAATCCTACTGGAGCTCCTCCTCCTGGAAAACCTCCCATGTTTAAATCATTAATAG : GACCTAGAATACCATCATCAGCTGCATCATCGTCAAAGTCAGATGCAGAAGATGACACTTTATCAGCTCTTCCGCCACCGCCACCACCACCTCCATTGCCCCCAACTGGTGATGCAGATTCTGTAGATGGGTCTGTGATTCCTGCATCTTTACCTTTACCTCCTCCACCACCTATGCCCCCAAAGCCTGCAATGACAGACATGGGTGCTTCATTGCCATTACCTCCTTTGCCCCCACCACCCCCTGGCCCCCCACCAAAGGAACATATCTCTGGCCATCTTCCACTTCCTCCACCTCCTCCCCGACCTCTTCATCAATCTGCTCAACCTCCTCATTCTGGCATTGTTGGAAATGAAAGGGATAAAAATCTTTCTGAACTGGATGAAATGTCTTCAACAGAGCAAAATCAG : GCCTCGTCCATGCTTCCCCCACCACCTCCTCCACCAGGGTTGCCATTAAAGTCAGATGGCATGCCTGCTGACTCTGATGCTAAAGTTTTGGAAACAAAAGATCATCTTAAATTACCTCCACCACCTCCACGGCACCCTTCAGGTCTTGGACCTGCCATGGTCCCAACTTATCAGCCTGATGTATTACCTCCTGGAATATCTCGGTTCCCTCCACCCCCTCCTCCAATTGATATGCGGCCACCACCTGGAATTGCCATCCAGCCTGCTCCTCCTGGAATGATGGTCCCTCTCTTGCCAAGACCACCTTTTGGACCTCCTCCACTAATGATGAGACCACCACTTCCACCTGGTCCCCCTCCTTTTCAACAGGATGGTGCTAGACTGCTTGCTCCTCAAAAGCCATCATATGTCAAATCAGCTGCTTCAACAGTTATTAAGAGGCCTCTAGCTCAGCATACACCAGAACTTACATCTATG : GTCCCTGCATCTGTGCGTGTGAGGAGAGAATCTGCGCTCCCAAAACCCAAGCCAAAGTCATCTACTGCGGTTACAATCAACCAGCCTGCAGTAACTCCGCCTGTTGTCAAGCATGAATCTACAAGCACACCTGCACCAAAACCTCAAAGCATTGATGACTCGTATACAGCATTCTTGGAGGACATGAAAGCTCTTGGTGCTCTCGAAGGATGAAGTGACATCAAATAGGAGAGAGGAAGAGGAAACAAGTGGCTGTTGACAATCTGATGAGTTTGATATCTCTGTGACCATGTCTTGTGCTACTCGAGTGTCCACAACTTTATGGTGCTTTGATGTATCGACCATCTCATTCTTTCTTCGTGTGTATGATCTATGATTCATCTGTGTTCTGATTTTATCTTCCTCAGCATTTTGTCGCCTCTAATGAGCAGTTGATATGCGTTAGTCCAGAGGAAGTTGGAAAACATATTGTAAGATGGATTATTTCAAGGATCTTTCTTTTGGCTCT</gDNA_template>
            <first_frame> V  K  S  Q  *  C  L   : V  T  W  A  P  L  E  G  G  R  L  Q  K  R  K  K  G  S  K  T  L  N  L  K :   T  P  F  I  I  T  L  H  *  I  L  L  E  L  L  L  L  E  N  L  P  C  L  N  H  *  *  :  D  L  E  Y  H  H  Q  L  H  H  R  Q  S  Q  M  Q  K  M  T  L  Y  Q  L  F  R  H  R  H  H  H  L  H  C  P  Q  L  V  M  Q  I  L  *  M  G  L  *  F  L  H  L  Y  L  Y  L  L  H  H  L  C  P  Q  S  L  Q  *  Q  T  W  V  L  H  C  H  Y  L  L  C  P  H  H  P  L  A  P  H  Q  R  N  I  S  L  A  I  F  H  F  L  H  L  L  P  D  L  F  I  N  L  L  N  L  L  I  L  A  L  L  E  M  K  G  I  K  I  F  L  N  W  M  K  C  L  Q  Q  S  K  I  R :   P  R  P  C  F  P  H  H  L  L  H  Q  G  C  H  *  S  Q  M  A  C  L  L  T  L  M  L  K  F  W  K  Q  K  I  I  L  N  Y  L  H  H  L  H  G  T  L  Q  V  L  D  L  P  W  S  Q  L  I  S  L  M  Y  Y  L  L  E  Y  L  G  S  L  H  P  L  L  Q  L  I  C  G  H  H  L  E  L  P  S  S  L  L  L  L  E  *  W  S  L  S  C  Q  D  H  L  L  D  L  L  H  *  *  *  D  H  H  F  H  L  V  P  L  L  F  N  R  M  V  L  D  C  L  L  L  K  S  H  H  M  S  N  Q  L  L  Q  Q  L  L  R  G  L  *  L  S  I  H  Q  N  L  H  L  W :   S  L  H  L  C  V  *  G  E  N  L  R  S  Q  N  P  S  Q  S  H  L  L  R  L  Q  S  T  S  L  Q  *  L  R  L  L  S  S  M  N  L  Q  A  H  L  H  Q  N  L  K  A  L  M  T  R  I  Q  H  S  W  R  T  *  K  L  L  V  L  S  K  D  E  V  T  S  N  R  R  E  E  E  E  T  S  G  C  *  Q  S  D  E  F  D  I  S  V  T  M  S  C  A  T  R  V  S  T  T  L  W  C  F  D  V  S  T  I  S  F  F  L  R  V  Y  D  L  *  F  I  C  V  L  I  L  S  S  S  A  F  C  R  L  *  *  A  V  D  M  R  *  S  R  G  S  W  K  T  Y  C  K  M  D  Y  F  K  D  L  S  F  G  S </first_frame>
            <second_frame>  *  R  A  S  N  V  *  :  S  P  G  P  P  S  K  A  D  G  C  R  R  G  R  K  D  Q  R  P  *  T  *   : R  L  R  L  L  S  P  Y  T  E  S  Y  W  S  S  S  S  W  K  T  S  H  V  *  I  I  N  R :   T  *  N  T  I  I  S  C  I  I  V  K  V  R  C  R  R  *  H  F  I  S  S  S  A  T  A  T  T  T  S  I  A  P  N  W  *  C  R  F  C  R  W  V  C  D  S  C  I  F  T  F  T  S  S  T  T  Y  A  P  K  A  C  N  D  R  H  G  C  F  I  A  I  T  S  F  A  P  T  T  P  W  P  P  T  K  G  T  Y  L  W  P  S  S  T  S  S  T  S  S  P  T  S  S  S  I  C  S  T  S  S  F  W  H  C  W  K  *  K  G  *  K  S  F  *  T  G  *  N  V  F  N  R  A  K  S   : G  L  V  H  A  S  P  T  T  S  S  T  R  V  A  I  K  V  R  W  H  A  C  *  L  *  C  *  S  F  G  N  K  R  S  S  *  I  T  S  T  T  S  T  A  P  F  R  S  W  T  C  H  G  P  N  L  S  A  *  C  I  T  S  W  N  I  S  V  P  S  T  P  S  S  N  *  Y  A  A  T  T  W  N  C  H  P  A  C  S  S  W  N  D  G  P  S  L  A  K  T  T  F  W  T  S  S  T  N  D  E  T  T  T  S  T  W  S  P  S  F  S  T  G  W  C  *  T  A  C  S  S  K  A  I  I  C  Q  I  S  C  F  N  S  Y  *  E  A  S  S  S  A  Y  T  R  T  Y  I  Y   : G  P  C  I  C  A  C  E  E  R  I  C  A  P  K  T  Q  A  K  V  I  Y  C  G  Y  N  Q  P  A  C  S  N  S  A  C  C  Q  A  *  I  Y  K  H  T  C  T  K  T  S  K  H  *  *  L  V  Y  S  I  L  G  G  H  E  S  S  W  C  S  R  R  M  K  *  H  Q  I  G  E  R  K  R  K  Q  V  A  V  D  N  L  M  S  L  I  S  L  *  P  C  L  V  L  L  E  C  P  Q  L  Y  G  A  L  M  Y  R  P  S  H  S  F  F  V  C  M  I  Y  D  S  S  V  F  *  F  Y  L  P  Q  H  F  V  A  S  N  E  Q  L  I  C  V  S  P  E  E  V  G  K  H  I  V  R  W  I  I  S  R  I  F  L  L  A   </second_frame>
            <third_frame>   E  E  P  V  M  F  S :   H  L  G  P  P  R  R  R  T  A  A  E  E  E  E  R  I  K  D  P  K  P  E  :  D  S  V  Y  Y  H  P  T  L  N  P  T  G  A  P  P  P  G  K  P  P  M  F  K  S  L  I   : G  P  R  I  P  S  S  A  A  S  S  S  K  S  D  A  E  D  D  T  L  S  A  L  P  P  P  P  P  P  P  P  L  P  P  T  G  D  A  D  S  V  D  G  S  V  I  P  A  S  L  P  L  P  P  P  P  P  M  P  P  K  P  A  M  T  D  M  G  A  S  L  P  L  P  P  L  P  P  P  P  P  G  P  P  P  K  E  H  I  S  G  H  L  P  L  P  P  P  P  P  R  P  L  H  Q  S  A  Q  P  P  H  S  G  I  V  G  N  E  R  D  K  N  L  S  E  L  D  E  M  S  S  T  E  Q  N  Q  :  A  S  S  M  L  P  P  P  P  P  P  P  G  L  P  L  K  S  D  G  M  P  A  D  S  D  A  K  V  L  E  T  K  D  H  L  K  L  P  P  P  P  P  R  H  P  S  G  L  G  P  A  M  V  P  T  Y  Q  P  D  V  L  P  P  G  I  S  R  F  P  P  P  P  P  P  I  D  M  R  P  P  P  G  I  A  I  Q  P  A  P  P  G  M  M  V  P  L  L  P  R  P  P  F  G  P  P  P  L  M  M  R  P  P  L  P  P  G  P  P  P  F  Q  Q  D  G  A  R  L  L  A  P  Q  K  P  S  Y  V  K  S  A  A  S  T  V  I  K  R  P  L  A  Q  H  T  P  E  L  T  S  M  :  V  P  A  S  V  R  V  R  R  E  S  A  L  P  K  P  K  P  K  S  S  T  A  V  T  I  N  Q  P  A  V  T  P  P  V  V  K  H  E  S  T  S  T  P  A  P  K  P  Q  S  I  D  D  S  Y  T  A  F  L  E  D  M  K  A  L  G  A  L  E  G  *  S  D  I  K  *  E  R  G  R  G  N  K  W  L  L  T  I  *  *  V  *  Y  L  C  D  H  V  L  C  Y  S  S  V  H  N  F  M  V  L  *  C  I  D  H  L  I  L  S  S  C  V  *  S  M  I  H  L  C  S  D  F  I  F  L  S  I  L  S  P  L  M  S  S  *  Y  A  L  V  Q  R  K  L  E  N  I  L  *  D  G  L  F  Q  G  S  F  F  W  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12631" stop="12650"/>
                    <exon start="12744" stop="12813"/>
                    <exon start="13028" stop="13109"/>
                    <exon start="13215" stop="13624"/>
                    <exon start="13729" stop="14205"/>
                    <exon start="15272" stop="15484"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1269</number_coding_nucleotides>
                  <number_encoded_amino_acids>423</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EEPVMFSHLGPPRRRTAAEEEERIKDPKPEDSVYYHPTLNPTGAPPPGKPPMFKSLIGPRIPSSAASSSKSDAEDDTLSALPPPPPPPPLPPTGDADSVDGSVIPASLPLPPPPPMPPKPAMTDMGASLPLPPLPPPPPGPPPKEHISGHLPLPPPPPRPLHQSAQPPHSGIVGNERDKNLSELDEMSSTEQNQASSMLPPPPPPPGLPLKSDGMPADSDAKVLETKDHLKLPPPPPRHPSGLGPAMVPTYQPDVLPPGISRFPPPPPPIDMRPPPGIAIQPAPPGMMVPLLPRPPFGPPPLMMRPPLPPGPPPFQQDGARLLAPQKPSYVKSAASTVIKRPLAQHTPELTSMVPASVRVRRESALPKPKPKSSTAVTINQPAVTPPVVKHESTSTPAPKPQSIDDSYTAFLEDMKALGALEG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="25536" PGL_stop="26447"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="25536" e_stop="26447"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="25536" e_stop="26447" e_length="912"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25536" stop="26248"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E426967" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25614" stop="26447"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E553957" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25630" stop="26366"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423019" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAGAAGAAGAAAAAAAACAAATACACGTACCCTGGTAAAACCCAGAAGTTAAAAGTCGAACTGGTTTTCTGCTTGACGAGCAAATATGGTGTCTCCTCTTTCATTAAATATCGTAGACAAGCGTAATACAAAGTTCCCATAACTTCTGGGCACTCAAAATTCTTTTCCCTCAGAGAAGAAACAACAAAATGAATATAGAGTTTAGAAGACTTTGACTGCATCACTAAGAGACTACAGACCAATTGCCAATCTATACAGACTTGCTTACATTGGAAGTGAAAGATAATATGATTCATTACCTGTGTACAGAAGCAATATCTCGAAAATCAAACATCTACACATTCCTTGTGACTACGAAACTGGTGGCAACTACTAGTTTCTTTAACCACGCCACCTTATTGTAAGGATTCCAAAATTTTCAGATGACGCAAATCTTTGATTTTACCAATGCTTACCAAGTATCAACAGCACCAGAACTTACATTTTTCTTTCCAATCCTCTGATAACTTCCGCCATGATACACAAATTTGAAGAAGTTTTTCTCGCTATCAGGCCAACTACTCCTATTTTCTCTTCATCTCGTCAACAAGTTTTCTGATGGTATAGTACAGTTTCTTACACAATTTTGTAACTTTGCAGATCAACAATGCATAATATCGTTGTTCCCCTTAGCGATTGAATGGAAAGCACAGTAGCATATCTTCGTTGCAGCTTAGGGAGGTATATTTTCTAAGCTGAAATAGATTACAGCTTCAAAGAAACCAACGCTGATCCAGATCATCTTTTCACTATTAGAGAGGTACCATTTGCTGACTGGACTAGTTTACAGCTTCGAAGAAAAGGACCTGCGGTTGCAAATGCCCTCTCTCACACATGACGAGAACATCATCCCAGCCACCAATTACCTGAAT</gDNA_template>
            <first_frame> S  E  E  E  K  K  Q  I  H  V  P  W  *  N  P  E  V  K  S  R  T  G  F  L  L  D  E  Q  I  W  C  L  L  F  H  *  I  S  *  T  S  V  I  Q  S  S  H  N  F  W  A  L  K  I  L  F  P  Q  R  R  N  N  K  M  N  I  E  F  R  R  L  *  L  H  H  *  E  T  T  D  Q  L  P  I  Y  T  D  L  L  T  L  E  V  K  D  N  M  I  H  Y  L  C  T  E  A  I  S  R  K  S  N  I  Y  T  F  L  V  T  T  K  L  V  A  T  T  S  F  F  N  H  A  T  L  L  *  G  F  Q  N  F  Q  M  T  Q  I  F  D  F  T  N  A  Y  Q  V  S  T  A  P  E  L  T  F  F  F  P  I  L  *  *  L  P  P  *  Y  T  N  L  K  K  F  F  S  L  S  G  Q  L  L  L  F  S  L  H  L  V  N  K  F  S  D  G  I  V  Q  F  L  T  Q  F  C  N  F  A  D  Q  Q  C  I  I  S  L  F  P  L  A  I  E  W  K  A  Q  *  H  I  F  V  A  A  *  G  G  I  F  S  K  L  K  *  I  T  A  S  K  K  P  T  L  I  Q  I  I  F  S  L  L  E  R  Y  H  L  L  T  G  L  V  Y  S  F  E  E  K  D  L  R  L  Q  M  P  S  L  T  H  D  E  N  I  I  P  A  T  N  Y  L  N </first_frame>
            <second_frame>  Q  K  K  K  K  N  K  Y  T  Y  P  G  K  T  Q  K  L  K  V  E  L  V  F  C  L  T  S  K  Y  G  V  S  S  F  I  K  Y  R  R  Q  A  *  Y  K  V  P  I  T  S  G  H  S  K  F  F  S  L  R  E  E  T  T  K  *  I  *  S  L  E  D  F  D  C  I  T  K  R  L  Q  T  N  C  Q  S  I  Q  T  C  L  H  W  K  *  K  I  I  *  F  I  T  C  V  Q  K  Q  Y  L  E  N  Q  T  S  T  H  S  L  *  L  R  N  W  W  Q  L  L  V  S  L  T  T  P  P  Y  C  K  D  S  K  I  F  R  *  R  K  S  L  I  L  P  M  L  T  K  Y  Q  Q  H  Q  N  L  H  F  S  F  Q  S  S  D  N  F  R  H  D  T  Q  I  *  R  S  F  S  R  Y  Q  A  N  Y  S  Y  F  L  F  I  S  S  T  S  F  L  M  V  *  Y  S  F  L  H  N  F  V  T  L  Q  I  N  N  A  *  Y  R  C  S  P  *  R  L  N  G  K  H  S  S  I  S  S  L  Q  L  R  E  V  Y  F  L  S  *  N  R  L  Q  L  Q  R  N  Q  R  *  S  R  S  S  F  H  Y  *  R  G  T  I  C  *  L  D  *  F  T  A  S  K  K  R  T  C  G  C  K  C  P  L  S  H  M  T  R  T  S  S  Q  P  P  I  T  *   </second_frame>
            <third_frame>   R  R  R  K  K  T  N  T  R  T  L  V  K  P  R  S  *  K  S  N  W  F  S  A  *  R  A  N  M  V  S  P  L  S  L  N  I  V  D  K  R  N  T  K  F  P  *  L  L  G  T  Q  N  S  F  P  S  E  K  K  Q  Q  N  E  Y  R  V  *  K  T  L  T  A  S  L  R  D  Y  R  P  I  A  N  L  Y  R  L  A  Y  I  G  S  E  R  *  Y  D  S  L  P  V  Y  R  S  N  I  S  K  I  K  H  L  H  I  P  C  D  Y  E  T  G  G  N  Y  *  F  L  *  P  R  H  L  I  V  R  I  P  K  F  S  D  D  A  N  L  *  F  Y  Q  C  L  P  S  I  N  S  T  R  T  Y  I  F  L  S  N  P  L  I  T  S  A  M  I  H  K  F  E  E  V  F  L  A  I  R  P  T  T  P  I  F  S  S  S  R  Q  Q  V  F  *  W  Y  S  T  V  S  Y  T  I  L  *  L  C  R  S  T  M  H  N  I  V  V  P  L  S  D  *  M  E  S  T  V  A  Y  L  R  C  S  L  G  R  Y  I  F  *  A  E  I  D  Y  S  F  K  E  T  N  A  D  P  D  H  L  F  T  I  R  E  V  P  F  A  D  W  T  S  L  Q  L  R  R  K  G  P  A  V  A  N  A  L  S  H  T  *  R  E  H  H  P  S  H  Q  L  P  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0002C17.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="28308" PGL_stop="25598"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28135" e_stop="27986"/>
            <exon e_start="27858" e_stop="27725"/>
            <exon e_start="26605" e_stop="26519"/>
            <exon e_start="26441" e_stop="25598"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.966" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="28135" e_stop="27986" e_length="150"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="0.991">
            <gDNA_intron_boundary i_start="27985" i_stop="27859" i_length="127"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="27858" e_stop="27725" e_length="134"/>
          </exon>
          <intron i_serial="2" don_prob="0.966" acc_prob="0.997">
            <gDNA_intron_boundary i_start="27724" i_stop="26606" i_length="1119"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="26605" e_stop="26519" e_length="87"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="26518" i_stop="26442" i_length="77"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="26441" e_stop="25598" e_length="844"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28135" stop="27986"/>
              <exon start="27858" stop="27725"/>
              <exon start="26605" stop="26519"/>
              <exon start="26441" stop="26172"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306876" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28122" stop="27986"/>
              <exon start="27858" stop="27725"/>
              <exon start="26605" stop="26519"/>
              <exon start="26441" stop="26050"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736342" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28074" stop="27986"/>
              <exon start="27858" stop="27725"/>
              <exon start="26605" stop="26519"/>
              <exon start="26441" stop="26066"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E426966" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28074" stop="27986"/>
              <exon start="27858" stop="27725"/>
              <exon start="26605" stop="26519"/>
              <exon start="26441" stop="26165"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E484610" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27996" stop="27986"/>
              <exon start="27858" stop="27725"/>
              <exon start="26605" stop="26519"/>
              <exon start="26441" stop="26067"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482651" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26599" stop="26519"/>
              <exon start="26441" stop="26094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239504" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26434" stop="25946"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306843" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26370" stop="25599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26368" stop="25598"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542112" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25979" stop="25598"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217908" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25962" stop="25598"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218128" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGGTTATGTGTCCAGAAAGCTCATTTGACGAGCTTCTGAATCTTGTTGAGATGAACCATCAGTTGGCTTGCGATCCTGAGGTTGGTGGATGTGAGAAACTTAACTATATTCATCACATTCTCTCTGCTCCACCACATATTTTCACAACGG : TTTTGGGTTGGCAAAATACTTGTGAGGATGTAGATGACATAAAAGCCACATTATCAGCTTTATCTACTGAAGTGGACATCGGCGTCCTTTATCGGGGTCTTGATCCGAAAAACAAACATTGCTTAACTTCTGTG : GTTTGCTACTATGGACAGCATTATCACTGTTTTGCCTACAGTCATGATCGTGGACAGTGGATCATGTATGATGACAAAACCGTAAAG : GTAATTGGTGGCTGGGATGATGTTCTCGTCATGTGTGAGAGAGGGCATTTGCAACCGCAGGTCCTTTTCTTCGAAGCTGTAAACTAGTCCAGTCAGCAAATGGTACCTCTCTAATAGTGAAAAGATGATCTGGATCAGCGTTGGTTTCTTTGAAGCTGTAATCTATTTCAGCTTAGAAAATATACCTCCCTAAGCTGCAACGAAGATATGCTACTGTGCTTTCCATTCAATCGCTAAGGGGAACAACGATATTATGCATTGTTGATCTGCAAAGTTACAAAATTGTGTAAGAAACTGTACTATACCATCAGAAAACTTGTTGACGAGATGAAGAGAAAATAGGAGTAGTTGGCCTGATAGCGAGAAAAACTTCTTCAAATTTGTGTATCATGGCGGAAGTTATCAGAGGATTGGAAAGAAAAATGTAAGTTCTGGTGCTGTTGATACTTGGTAAGCATTGGTAAAATCAAAGATTTGCGTCATCTGAAAATTTTGGAATCCTTACAATAAGGTGGCGTGGTTAAAGAAACTAGTAGTTGCCACCAGTTTCGTAGTCACAAGGAATGTGTAGATGTTTGATTTTCGAGATATTGCTTCTGTACACAGGTAATGAATCATATTATCTTTCACTTCCAATGTAAGCAAGTCTGTATAGATTGGCAATTGGTCTGTAGTCTCTTAGTGATGCAGTCAAAGTCTTCTAAACTCTATATTCATTTTGTTGTTTCTTCTCTGAGGGAAAAGAATTTTGAGTGCCCAGAAGTTATGGGAACTTTGTATTACGCTTGTCTACGATATTTAATGAAAGAGGAGACACCATATTTGCTCGTCAAGCAGAAAACCA</gDNA_template>
            <first_frame> R  L  C  V  Q  K  A  H  L  T  S  F  *  I  L  L  R  *  T  I  S  W  L  A  I  L  R  L  V  D  V  R  N  L  T  I  F  I  T  F  S  L  L  H  H  I  F  S  Q  R  :  F  W  V  G  K  I  L  V  R  M  *  M  T  *  K  P  H  Y  Q  L  Y  L  L  K  W  T  S  A  S  F  I  G  V  L  I  R  K  T  N  I  A  *  L  L  W :   F  A  T  M  D  S  I  I  T  V  L  P  T  V  M  I  V  D  S  G  S  C  M  M  T  K  P  *  R :   *  L  V  A  G  M  M  F  S  S  C  V  R  E  G  I  C  N  R  R  S  F  S  S  K  L  *  T  S  P  V  S  K  W  Y  L  S  N  S  E  K  M  I  W  I  S  V  G  F  F  E  A  V  I  Y  F  S  L  E  N  I  P  P  *  A  A  T  K  I  C  Y  C  A  F  H  S  I  A  K  G  N  N  D  I  M  H  C  *  S  A  K  L  Q  N  C  V  R  N  C  T  I  P  S  E  N  L  L  T  R  *  R  E  N  R  S  S  W  P  D  S  E  K  N  F  F  K  F  V  Y  H  G  G  S  Y  Q  R  I  G  K  K  N  V  S  S  G  A  V  D  T  W  *  A  L  V  K  S  K  I  C  V  I  *  K  F  W  N  P  Y  N  K  V  A  W  L  K  K  L  V  V  A  T  S  F  V  V  T  R  N  V  *  M  F  D  F  R  D  I  A  S  V  H  R  *  *  I  I  L  S  F  T  S  N  V  S  K  S  V  *  I  G  N  W  S  V  V  S  *  *  C  S  Q  S  L  L  N  S  I  F  I  L  L  F  L  L  *  G  K  R  I  L  S  A  Q  K  L  W  E  L  C  I  T  L  V  Y  D  I  *  *  K  R  R  H  H  I  C  S  S  S  R  K  P </first_frame>
            <second_frame>  G  Y  V  S  R  K  L  I  *  R  A  S  E  S  C  *  D  E  P  S  V  G  L  R  S  *  G  W  W  M  *  E  T  *  L  Y  S  S  H  S  L  C  S  T  T  Y  F  H  N  G :   F  G  L  A  K  Y  L  *  G  C  R  *  H  K  S  H  I  I  S  F  I  Y  *  S  G  H  R  R  P  L  S  G  S  *  S  E  K  Q  T  L  L  N  F  C   : G  L  L  L  W  T  A  L  S  L  F  C  L  Q  S  *  S  W  T  V  D  H  V  *  *  Q  N  R  K   : G  N  W  W  L  G  *  C  S  R  H  V  *  E  R  A  F  A  T  A  G  P  F  L  R  S  C  K  L  V  Q  S  A  N  G  T  S  L  I  V  K  R  *  S  G  S  A  L  V  S  L  K  L  *  S  I  S  A  *  K  I  Y  L  P  K  L  Q  R  R  Y  A  T  V  L  S  I  Q  S  L  R  G  T  T  I  L  C  I  V  D  L  Q  S  Y  K  I  V  *  E  T  V  L  Y  H  Q  K  T  C  *  R  D  E  E  K  I  G  V  V  G  L  I  A  R  K  T  S  S  N  L  C  I  M  A  E  V  I  R  G  L  E  R  K  M  *  V  L  V  L  L  I  L  G  K  H  W  *  N  Q  R  F  A  S  S  E  N  F  G  I  L  T  I  R  W  R  G  *  R  N  *  *  L  P  P  V  S  *  S  Q  G  M  C  R  C  L  I  F  E  I  L  L  L  Y  T  G  N  E  S  Y  Y  L  S  L  P  M  *  A  S  L  Y  R  L  A  I  G  L  *  S  L  S  D  A  V  K  V  F  *  T  L  Y  S  F  C  C  F  F  S  E  G  K  E  F  *  V  P  R  S  Y  G  N  F  V  L  R  L  S  T  I  F  N  E  R  G  D  T  I  F  A  R  Q  A  E  N   </second_frame>
            <third_frame>   V  M  C  P  E  S  S  F  D  E  L  L  N  L  V  E  M  N  H  Q  L  A  C  D  P  E  V  G  G  C  E  K  L  N  Y  I  H  H  I  L  S  A  P  P  H  I  F  T  T   : V  L  G  W  Q  N  T  C  E  D  V  D  D  I  K  A  T  L  S  A  L  S  T  E  V  D  I  G  V  L  Y  R  G  L  D  P  K  N  K  H  C  L  T  S  V  :  V  C  Y  Y  G  Q  H  Y  H  C  F  A  Y  S  H  D  R  G  Q  W  I  M  Y  D  D  K  T  V  K  :  V  I  G  G  W  D  D  V  L  V  M  C  E  R  G  H  L  Q  P  Q  V  L  F  F  E  A  V  N  *  S  S  Q  Q  M  V  P  L  *  *  *  K  D  D  L  D  Q  R  W  F  L  *  S  C  N  L  F  Q  L  R  K  Y  T  S  L  S  C  N  E  D  M  L  L  C  F  P  F  N  R  *  G  E  Q  R  Y  Y  A  L  L  I  C  K  V  T  K  L  C  K  K  L  Y  Y  T  I  R  K  L  V  D  E  M  K  R  K  *  E  *  L  A  *  *  R  E  K  L  L  Q  I  C  V  S  W  R  K  L  S  E  D  W  K  E  K  C  K  F  W  C  C  *  Y  L  V  S  I  G  K  I  K  D  L  R  H  L  K  I  L  E  S  L  Q  *  G  G  V  V  K  E  T  S  S  C  H  Q  F  R  S  H  K  E  C  V  D  V  *  F  S  R  Y  C  F  C  T  Q  V  M  N  H  I  I  F  H  F  Q  C  K  Q  V  C  I  D  W  Q  L  V  C  S  L  L  V  M  Q  S  K  S  S  K  L  Y  I  H  F  V  V  S  S  L  R  E  K  N  F  E  C  P  E  V  M  G  T  L  Y  Y  A  C  L  R  Y  L  M  K  E  E  T  P  Y  L  L  V  K  Q  K  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28133" stop="27986"/>
                    <exon start="27858" stop="27725"/>
                    <exon start="26605" stop="26519"/>
                    <exon start="26441" stop="26355"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>453</number_coding_nucleotides>
                  <number_encoded_amino_acids>151</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VMCPESSFDELLNLVEMNHQLACDPEVGGCEKLNYIHHILSAPPHIFTTVLGWQNTCEDVDDIKATLSALSTEVDIGVLYRGLDPKNKHCLTSVVCYYGQHYHCFAYSHDRGQWIMYDDKTVKVIGGWDDVLVMCERGHLQPQVLFFEAVN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25862" stop="25599"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>264</number_coding_nucleotides>
                  <number_encoded_amino_acids>88</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSRYCFCTQVMNHIIFHFQCKQVCIDWQLVCSLLVMQSKSSKLYIHFVVSSLREKNFECPEVMGTLYYACLRYLMKEETPYLLVKQKT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="28308" e_stop="28306"/>
            <exon e_start="28133" e_stop="27986"/>
            <exon e_start="27858" e_stop="27725"/>
            <exon e_start="26605" e_stop="26519"/>
            <exon e_start="26441" e_stop="25598"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.974" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.966" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="28308" e_stop="28306" e_length="3"/>
          </exon>
          <intron i_serial="1" don_prob="0.974" acc_prob="0.993">
            <gDNA_intron_boundary i_start="28305" i_stop="28134" i_length="172"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="28133" e_stop="27986" e_length="148"/>
          </exon>
          <intron i_serial="2" don_prob="0.989" acc_prob="0.991">
            <gDNA_intron_boundary i_start="27985" i_stop="27859" i_length="127"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="27858" e_stop="27725" e_length="134"/>
          </exon>
          <intron i_serial="3" don_prob="0.966" acc_prob="0.997">
            <gDNA_intron_boundary i_start="27724" i_stop="26606" i_length="1119"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="26605" e_stop="26519" e_length="87"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="26518" i_stop="26442" i_length="77"/>
          </intron>
          <exon e_serial="5" e_score="0.997">
            <gDNA_exon_boundary e_start="26441" e_stop="25598" e_length="844"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28308" stop="28306"/>
              <exon start="28133" stop="27986"/>
              <exon start="27858" stop="27725"/>
              <exon start="26605" stop="26519"/>
              <exon start="26441" stop="26045"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28122" stop="27986"/>
              <exon start="27858" stop="27725"/>
              <exon start="26605" stop="26519"/>
              <exon start="26441" stop="26050"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736342" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28074" stop="27986"/>
              <exon start="27858" stop="27725"/>
              <exon start="26605" stop="26519"/>
              <exon start="26441" stop="26066"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E426966" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28074" stop="27986"/>
              <exon start="27858" stop="27725"/>
              <exon start="26605" stop="26519"/>
              <exon start="26441" stop="26165"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E484610" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27996" stop="27986"/>
              <exon start="27858" stop="27725"/>
              <exon start="26605" stop="26519"/>
              <exon start="26441" stop="26067"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482651" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26599" stop="26519"/>
              <exon start="26441" stop="26094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239504" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26434" stop="25946"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306843" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26370" stop="25599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26368" stop="25598"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542112" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25979" stop="25598"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217908" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25962" stop="25598"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218128" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAG : GTTATGTGTCCAGAAAGCTCATTTGACGAGCTTCTGAATCTTGTTGAGATGAACCATCAGTTGGCTTGCGATCCTGAGGTTGGTGGATGTGAGAAACTTAACTATATTCATCACATTCTCTCTGCTCCACCACATATTTTCACAACGG : TTTTGGGTTGGCAAAATACTTGTGAGGATGTAGATGACATAAAAGCCACATTATCAGCTTTATCTACTGAAGTGGACATCGGCGTCCTTTATCGGGGTCTTGATCCGAAAAACAAACATTGCTTAACTTCTGTG : GTTTGCTACTATGGACAGCATTATCACTGTTTTGCCTACAGTCATGATCGTGGACAGTGGATCATGTATGATGACAAAACCGTAAAG : GTAATTGGTGGCTGGGATGATGTTCTCGTCATGTGTGAGAGAGGGCATTTGCAACCGCAGGTCCTTTTCTTCGAAGCTGTAAACTAGTCCAGTCAGCAAATGGTACCTCTCTAATAGTGAAAAGATGATCTGGATCAGCGTTGGTTTCTTTGAAGCTGTAATCTATTTCAGCTTAGAAAATATACCTCCCTAAGCTGCAACGAAGATATGCTACTGTGCTTTCCATTCAATCGCTAAGGGGAACAACGATATTATGCATTGTTGATCTGCAAAGTTACAAAATTGTGTAAGAAACTGTACTATACCATCAGAAAACTTGTTGACGAGATGAAGAGAAAATAGGAGTAGTTGGCCTGATAGCGAGAAAAACTTCTTCAAATTTGTGTATCATGGCGGAAGTTATCAGAGGATTGGAAAGAAAAATGTAAGTTCTGGTGCTGTTGATACTTGGTAAGCATTGGTAAAATCAAAGATTTGCGTCATCTGAAAATTTTGGAATCCTTACAATAAGGTGGCGTGGTTAAAGAAACTAGTAGTTGCCACCAGTTTCGTAGTCACAAGGAATGTGTAGATGTTTGATTTTCGAGATATTGCTTCTGTACACAGGTAATGAATCATATTATCTTTCACTTCCAATGTAAGCAAGTCTGTATAGATTGGCAATTGGTCTGTAGTCTCTTAGTGATGCAGTCAAAGTCTTCTAAACTCTATATTCATTTTGTTGTTTCTTCTCTGAGGGAAAAGAATTTTGAGTGCCCAGAAGTTATGGGAACTTTGTATTACGCTTGTCTACGATATTTAATGAAAGAGGAGACACCATATTTGCTCGTCAAGCAGAAAACCA</gDNA_template>
            <first_frame> K  :  V  M  C  P  E  S  S  F  D  E  L  L  N  L  V  E  M  N  H  Q  L  A  C  D  P  E  V  G  G  C  E  K  L  N  Y  I  H  H  I  L  S  A  P  P  H  I  F  T  T   : V  L  G  W  Q  N  T  C  E  D  V  D  D  I  K  A  T  L  S  A  L  S  T  E  V  D  I  G  V  L  Y  R  G  L  D  P  K  N  K  H  C  L  T  S  V  :  V  C  Y  Y  G  Q  H  Y  H  C  F  A  Y  S  H  D  R  G  Q  W  I  M  Y  D  D  K  T  V  K  :  V  I  G  G  W  D  D  V  L  V  M  C  E  R  G  H  L  Q  P  Q  V  L  F  F  E  A  V  N  *  S  S  Q  Q  M  V  P  L  *  *  *  K  D  D  L  D  Q  R  W  F  L  *  S  C  N  L  F  Q  L  R  K  Y  T  S  L  S  C  N  E  D  M  L  L  C  F  P  F  N  R  *  G  E  Q  R  Y  Y  A  L  L  I  C  K  V  T  K  L  C  K  K  L  Y  Y  T  I  R  K  L  V  D  E  M  K  R  K  *  E  *  L  A  *  *  R  E  K  L  L  Q  I  C  V  S  W  R  K  L  S  E  D  W  K  E  K  C  K  F  W  C  C  *  Y  L  V  S  I  G  K  I  K  D  L  R  H  L  K  I  L  E  S  L  Q  *  G  G  V  V  K  E  T  S  S  C  H  Q  F  R  S  H  K  E  C  V  D  V  *  F  S  R  Y  C  F  C  T  Q  V  M  N  H  I  I  F  H  F  Q  C  K  Q  V  C  I  D  W  Q  L  V  C  S  L  L  V  M  Q  S  K  S  S  K  L  Y  I  H  F  V  V  S  S  L  R  E  K  N  F  E  C  P  E  V  M  G  T  L  Y  Y  A  C  L  R  Y  L  M  K  E  E  T  P  Y  L  L  V  K  Q  K  T  </first_frame>
            <second_frame>  R :   L  C  V  Q  K  A  H  L  T  S  F  *  I  L  L  R  *  T  I  S  W  L  A  I  L  R  L  V  D  V  R  N  L  T  I  F  I  T  F  S  L  L  H  H  I  F  S  Q  R  :  F  W  V  G  K  I  L  V  R  M  *  M  T  *  K  P  H  Y  Q  L  Y  L  L  K  W  T  S  A  S  F  I  G  V  L  I  R  K  T  N  I  A  *  L  L  W :   F  A  T  M  D  S  I  I  T  V  L  P  T  V  M  I  V  D  S  G  S  C  M  M  T  K  P  *  R :   *  L  V  A  G  M  M  F  S  S  C  V  R  E  G  I  C  N  R  R  S  F  S  S  K  L  *  T  S  P  V  S  K  W  Y  L  S  N  S  E  K  M  I  W  I  S  V  G  F  F  E  A  V  I  Y  F  S  L  E  N  I  P  P  *  A  A  T  K  I  C  Y  C  A  F  H  S  I  A  K  G  N  N  D  I  M  H  C  *  S  A  K  L  Q  N  C  V  R  N  C  T  I  P  S  E  N  L  L  T  R  *  R  E  N  R  S  S  W  P  D  S  E  K  N  F  F  K  F  V  Y  H  G  G  S  Y  Q  R  I  G  K  K  N  V  S  S  G  A  V  D  T  W  *  A  L  V  K  S  K  I  C  V  I  *  K  F  W  N  P  Y  N  K  V  A  W  L  K  K  L  V  V  A  T  S  F  V  V  T  R  N  V  *  M  F  D  F  R  D  I  A  S  V  H  R  *  *  I  I  L  S  F  T  S  N  V  S  K  S  V  *  I  G  N  W  S  V  V  S  *  *  C  S  Q  S  L  L  N  S  I  F  I  L  L  F  L  L  *  G  K  R  I  L  S  A  Q  K  L  W  E  L  C  I  T  L  V  Y  D  I  *  *  K  R  R  H  H  I  C  S  S  S  R  K  P </second_frame>
            <third_frame>    : G  Y  V  S  R  K  L  I  *  R  A  S  E  S  C  *  D  E  P  S  V  G  L  R  S  *  G  W  W  M  *  E  T  *  L  Y  S  S  H  S  L  C  S  T  T  Y  F  H  N  G :   F  G  L  A  K  Y  L  *  G  C  R  *  H  K  S  H  I  I  S  F  I  Y  *  S  G  H  R  R  P  L  S  G  S  *  S  E  K  Q  T  L  L  N  F  C   : G  L  L  L  W  T  A  L  S  L  F  C  L  Q  S  *  S  W  T  V  D  H  V  *  *  Q  N  R  K   : G  N  W  W  L  G  *  C  S  R  H  V  *  E  R  A  F  A  T  A  G  P  F  L  R  S  C  K  L  V  Q  S  A  N  G  T  S  L  I  V  K  R  *  S  G  S  A  L  V  S  L  K  L  *  S  I  S  A  *  K  I  Y  L  P  K  L  Q  R  R  Y  A  T  V  L  S  I  Q  S  L  R  G  T  T  I  L  C  I  V  D  L  Q  S  Y  K  I  V  *  E  T  V  L  Y  H  Q  K  T  C  *  R  D  E  E  K  I  G  V  V  G  L  I  A  R  K  T  S  S  N  L  C  I  M  A  E  V  I  R  G  L  E  R  K  M  *  V  L  V  L  L  I  L  G  K  H  W  *  N  Q  R  F  A  S  S  E  N  F  G  I  L  T  I  R  W  R  G  *  R  N  *  *  L  P  P  V  S  *  S  Q  G  M  C  R  C  L  I  F  E  I  L  L  L  Y  T  G  N  E  S  Y  Y  L  S  L  P  M  *  A  S  L  Y  R  L  A  I  G  L  *  S  L  S  D  A  V  K  V  F  *  T  L  Y  S  F  C  C  F  F  S  E  G  K  E  F  *  V  P  R  S  Y  G  N  F  V  L  R  L  S  T  I  F  N  E  R  G  D  T  I  F  A  R  Q  A  E  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="-"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28308" stop="28306"/>
                    <exon start="28133" stop="27986"/>
                    <exon start="27858" stop="27725"/>
                    <exon start="26605" stop="26519"/>
                    <exon start="26441" stop="26355"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>456</number_coding_nucleotides>
                  <number_encoded_amino_acids>152</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KVMCPESSFDELLNLVEMNHQLACDPEVGGCEKLNYIHHILSAPPHIFTTVLGWQNTCEDVDDIKATLSALSTEVDIGVLYRGLDPKNKHCLTSVVCYYGQHYHCFAYSHDRGQWIMYDDKTVKVIGGWDDVLVMCERGHLQPQVLFFEAVN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="-"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25862" stop="25599"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>264</number_coding_nucleotides>
                  <number_encoded_amino_acids>88</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSRYCFCTQVMNHIIFHFQCKQVCIDWQLVCSLLVMQSKSSKLYIHFVVSSLREKNFECPEVMGTLYYACLRYLMKEETPYLLVKQKT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="30462" PGL_stop="29808"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30462" e_stop="29808"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="30462" e_stop="29808" e_length="655"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30462" stop="29808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542114" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAAAATAAGTCAGGGAAAGATTGCATTAATGCTTCCTGTCTTACCATAACATCTTTCCAGAATAGTATTTTAGCTCCATTTCCTCTTCTGAGTTTGTTGTTTCCTACTAGTTTGGTCCAGAAGGATCTCCTATTGTTTCCATGTTGAAACTCTATATGGCATAGTGACCTCATTGGTACACCACTGGGAGTCCTGGCCATACTTGTGATGTCTAACTTCTCTCCAAAGAGCCTGTTCTTCTTTCACATATCTCCACAACCATTTTATCAAGAGGCACTCGTTATGGATCCTAAGATCCCTAACTCCAAGATCATCTGAGAGCTTAGGTAGCTGCACTGTTTCCCAGTTAATTAGATAGCACCCTTCCTTTTTTTGTTTCCAAACCATAGAAAGTCTCTTCTAAGCTATAAAATTAGAGCACATCCTGTATTTGAATCTTTGAAACAAAGAAATGTGTTTGAATCAATCAAATCTATTTCCAAGCTAATTTCTGTTTCTGTTAGTAACAGTGATTGGTGAGCTCAATCATCTCTTTCCATTTCTTCATTGGTTAAACTTTAAAGGAGCAAGTCATCTTGGTTCAGATAAGTGATATAGTAATTGTGGCATTACTTCGTCATACTCAAGTTGACCTGCAATCCTCTGTAGATTTTT</gDNA_template>
            <first_frame> E  K  *  V  R  E  R  L  H  *  C  F  L  S  Y  H  N  I  F  P  E  *  Y  F  S  S  I  S  S  S  E  F  V  V  S  Y  *  F  G  P  E  G  S  P  I  V  S  M  L  K  L  Y  M  A  *  *  P  H  W  Y  T  T  G  S  P  G  H  T  C  D  V  *  L  L  S  K  E  P  V  L  L  S  H  I  S  T  T  I  L  S  R  G  T  R  Y  G  S  *  D  P  *  L  Q  D  H  L  R  A  *  V  A  A  L  F  P  S  *  L  D  S  T  L  P  F  F  V  S  K  P  *  K  V  S  S  K  L  *  N  *  S  T  S  C  I  *  I  F  E  T  K  K  C  V  *  I  N  Q  I  Y  F  Q  A  N  F  C  F  C  *  *  Q  *  L  V  S  S  I  I  S  F  H  F  F  I  G  *  T  L  K  E  Q  V  I  L  V  Q  I  S  D  I  V  I  V  A  L  L  R  H  T  Q  V  D  L  Q  S  S  V  D  F  </first_frame>
            <second_frame>  K  N  K  S  G  K  D  C  I  N  A  S  C  L  T  I  T  S  F  Q  N  S  I  L  A  P  F  P  L  L  S  L  L  F  P  T  S  L  V  Q  K  D  L  L  L  F  P  C  *  N  S  I  W  H  S  D  L  I  G  T  P  L  G  V  L  A  I  L  V  M  S  N  F  S  P  K  S  L  F  F  F  H  I  S  P  Q  P  F  Y  Q  E  A  L  V  M  D  P  K  I  P  N  S  K  I  I  *  E  L  R  *  L  H  C  F  P  V  N  *  I  A  P  F  L  F  L  F  P  N  H  R  K  S  L  L  S  Y  K  I  R  A  H  P  V  F  E  S  L  K  Q  R  N  V  F  E  S  I  K  S  I  S  K  L  I  S  V  S  V  S  N  S  D  W  *  A  Q  S  S  L  S  I  S  S  L  V  K  L  *  R  S  K  S  S  W  F  R  *  V  I  *  *  L  W  H  Y  F  V  I  L  K  L  T  C  N  P  L  *  I  F </second_frame>
            <third_frame>   K  I  S  Q  G  K  I  A  L  M  L  P  V  L  P  *  H  L  S  R  I  V  F  *  L  H  F  L  F  *  V  C  C  F  L  L  V  W  S  R  R  I  S  Y  C  F  H  V  E  T  L  Y  G  I  V  T  S  L  V  H  H  W  E  S  W  P  Y  L  *  C  L  T  S  L  Q  R  A  C  S  S  F  T  Y  L  H  N  H  F  I  K  R  H  S  L  W  I  L  R  S  L  T  P  R  S  S  E  S  L  G  S  C  T  V  S  Q  L  I  R  *  H  P  S  F  F  C  F  Q  T  I  E  S  L  F  *  A  I  K  L  E  H  I  L  Y  L  N  L  *  N  K  E  M  C  L  N  Q  S  N  L  F  P  S  *  F  L  F  L  L  V  T  V  I  G  E  L  N  H  L  F  P  F  L  H  W  L  N  F  K  G  A  S  H  L  G  S  D  K  *  Y  S  N  C  G  I  T  S  S  Y  S  S  *  P  A  I  L  C  R  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0002C17.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="34615" PGL_stop="32727"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="34615" e_stop="34288"/>
            <exon e_start="34193" e_stop="34065"/>
            <exon e_start="33932" e_stop="33741"/>
            <exon e_start="33650" e_stop="33598"/>
            <exon e_start="33483" e_stop="33141"/>
            <exon e_start="32969" e_stop="32900"/>
            <exon e_start="32785" e_stop="32727"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.669" acc_prob="0.997" e_score="0.976"/>
          <exon-intron don_prob="0.000" acc_prob="1.000" e_score="0.961"/>
          <exon-intron don_prob="0.000" acc_prob="0.995" e_score="0.943"/>
          <exon-intron don_prob="0.973" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.895" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.650" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.976">
            <gDNA_exon_boundary e_start="34615" e_stop="34288" e_length="328"/>
          </exon>
          <intron i_serial="1" don_prob="0.669" acc_prob="0.997">
            <gDNA_intron_boundary i_start="34287" i_stop="34194" i_length="94"/>
          </intron>
          <exon e_serial="2" e_score="0.961">
            <gDNA_exon_boundary e_start="34193" e_stop="34065" e_length="129"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="34064" i_stop="33933" i_length="132"/>
          </intron>
          <exon e_serial="3" e_score="0.943">
            <gDNA_exon_boundary e_start="33932" e_stop="33741" e_length="192"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="33740" i_stop="33651" i_length="90"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="33650" e_stop="33598" e_length="53"/>
          </exon>
          <intron i_serial="4" don_prob="0.973" acc_prob="0.996">
            <gDNA_intron_boundary i_start="33597" i_stop="33484" i_length="114"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="33483" e_stop="33141" e_length="343"/>
          </exon>
          <intron i_serial="5" don_prob="0.895" acc_prob="0.995">
            <gDNA_intron_boundary i_start="33140" i_stop="32970" i_length="171"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="32969" e_stop="32900" e_length="70"/>
          </exon>
          <intron i_serial="6" don_prob="0.650" acc_prob="0.997">
            <gDNA_intron_boundary i_start="32899" i_stop="32786" i_length="114"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="32785" e_stop="32727" e_length="59"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34615" stop="34288"/>
              <exon start="34193" stop="34065"/>
              <exon start="33932" stop="33793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474846" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34549" stop="34288"/>
              <exon start="34193" stop="34065"/>
              <exon start="33932" stop="33741"/>
              <exon start="33650" stop="33632"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E603849" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33818" stop="33741"/>
              <exon start="33650" stop="33598"/>
              <exon start="33483" stop="33141"/>
              <exon start="32969" stop="32900"/>
              <exon start="32785" stop="32727"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449546" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33818" stop="33741"/>
              <exon start="33650" stop="33598"/>
              <exon start="33483" stop="33205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423018" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33817" stop="33741"/>
              <exon start="33650" stop="33598"/>
              <exon start="33483" stop="33141"/>
              <exon start="32969" stop="32900"/>
              <exon start="32785" stop="32730"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326102" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAAGAGAACATGAAACAGAATTTGTCCGACAAAGCTACGATTCTATCTTGAGAAAGCGACGAGAACAACTCATAGATAGTGACAATGATACTACAATTATCAGCAATAGGCCTGAGTTGGATGCTATATCAAATGTTCTTAAAGAAGCAGAATCTCTCAATGTAAATCAATTTGGATTTGACGAAACTTACGGTGGTGGAACGTCTCAATTTTGTGACTTGGAGTCTGGCGAAGAGGATGATTGGAGACTGAAGGACTACCTTCATCAGGTGGACTCTAGTGTGGAAGTTGCAATACAGAGACAGAAGGAACATATCTCCATTGAG : CTTAGCAAAATTGATGCACGAATTATGAGGGTGGTTACCGGGATGCAGCAGTTGGAGTCGAAGCTTGAGCCGGCTTCTTCCCAGGATTACCGGCGAATTTTAGTGCCTCTATTGAAATCATTTCTGCGG : GCACACTTGGAGGACCTGGCCGAGAAGGATGCTACCGAGAAATCTGATGCCACAAGGGAAGCTTTTCTGGCTGAACTTGCACGTGATTCCGAAAAGAGTTCAAGTTGGGGAAATGAGAAGTCTAAACATGCCCATGAAAAGACAAAGGACAAGAAAAAGAAACAAGAGTATCGAAAAGCAAAAGATTCAAAG : CCTAACAGTGGTAATGAATTGCATGTGCTTCACCATGAGACTGTGGATCATGT : CTCATCTCCACTTGCTCATGATGGAGATGATCAAGAGAGTGAAATTCCTCAAACTGGTAATTCCTTAGATCTACAGGAAGAGGAGTACAAACGTATGATTGAGCTTGAAGCCGAGGAAAGGAAGCTAGAAGAAACTTTAGAGTATCAAAGAAGAATTGAGAATGAGGCTAAGCTGAAACATTTGGCTGAGCAACATAAGAGAACTGTAAGAGCAGTTCAAGAGAATATGGATGCAGTTACAAATCCTGAGTCCTACCCGTATCAAAAGTCGAGTCCTGACACTTACTTGAAGAGTTGTGATATTGATCAGAAAGTCAACGAGCAATGGAAGAGAAGTGAGAAG : AACAATGTACTATTGAACAGTGTAGAAGGTCTTTCAAAGAACTTTCCAGAAAGAATGTCACAAAGAGATG : GATTGTCAAACAAAGGAACTCCAGAGGATGGTATATTGATGTCTGATAAGCGATCTGGA</gDNA_template>
            <first_frame> K  K  R  T  *  N  R  I  C  P  T  K  L  R  F  Y  L  E  K  A  T  R  T  T  H  R  *  *  Q  *  Y  Y  N  Y  Q  Q  *  A  *  V  G  C  Y  I  K  C  S  *  R  S  R  I  S  Q  C  K  S  I  W  I  *  R  N  L  R  W  W  N  V  S  I  L  *  L  G  V  W  R  R  G  *  L  E  T  E  G  L  P  S  S  G  G  L  *  C  G  S  C  N  T  E  T  E  G  T  Y  L  H  *   : A  *  Q  N  *  C  T  N  Y  E  G  G  Y  R  D  A  A  V  G  V  E  A  *  A  G  F  F  P  G  L  P  A  N  F  S  A  S  I  E  I  I  S  A   : G  T  L  G  G  P  G  R  E  G  C  Y  R  E  I  *  C  H  K  G  S  F  S  G  *  T  C  T  *  F  R  K  E  F  K  L  G  K  *  E  V  *  T  C  P  *  K  D  K  G  Q  E  K  E  T  R  V  S  K  S  K  R  F  K   : A  *  Q  W  *  *  I  A  C  A  S  P  *  D  C  G  S  C  :  L  I  S  T  C  S  *  W  R  *  S  R  E  *  N  S  S  N  W  *  F  L  R  S  T  G  R  G  V  Q  T  Y  D  *  A  *  S  R  G  K  E  A  R  R  N  F  R  V  S  K  K  N  *  E  *  G  *  A  E  T  F  G  *  A  T  *  E  N  C  K  S  S  S  R  E  Y  G  C  S  Y  K  S  *  V  L  P  V  S  K  V  E  S  *  H  L  L  E  E  L  *  Y  *  S  E  S  Q  R  A  M  E  E  K  *  E   : E  Q  C  T  I  E  Q  C  R  R  S  F  K  E  L  S  R  K  N  V  T  K  R  W :   I  V  K  Q  R  N  S  R  G  W  Y  I  D  V  *  *  A  I  W  </first_frame>
            <second_frame>  K  R  E  H  E  T  E  F  V  R  Q  S  Y  D  S  I  L  R  K  R  R  E  Q  L  I  D  S  D  N  D  T  T  I  I  S  N  R  P  E  L  D  A  I  S  N  V  L  K  E  A  E  S  L  N  V  N  Q  F  G  F  D  E  T  Y  G  G  G  T  S  Q  F  C  D  L  E  S  G  E  E  D  D  W  R  L  K  D  Y  L  H  Q  V  D  S  S  V  E  V  A  I  Q  R  Q  K  E  H  I  S  I  E  :  L  S  K  I  D  A  R  I  M  R  V  V  T  G  M  Q  Q  L  E  S  K  L  E  P  A  S  S  Q  D  Y  R  R  I  L  V  P  L  L  K  S  F  L  R  :  A  H  L  E  D  L  A  E  K  D  A  T  E  K  S  D  A  T  R  E  A  F  L  A  E  L  A  R  D  S  E  K  S  S  S  W  G  N  E  K  S  K  H  A  H  E  K  T  K  D  K  K  K  K  Q  E  Y  R  K  A  K  D  S  K  :  P  N  S  G  N  E  L  H  V  L  H  H  E  T  V  D  H  V :   S  S  P  L  A  H  D  G  D  D  Q  E  S  E  I  P  Q  T  G  N  S  L  D  L  Q  E  E  E  Y  K  R  M  I  E  L  E  A  E  E  R  K  L  E  E  T  L  E  Y  Q  R  R  I  E  N  E  A  K  L  K  H  L  A  E  Q  H  K  R  T  V  R  A  V  Q  E  N  M  D  A  V  T  N  P  E  S  Y  P  Y  Q  K  S  S  P  D  T  Y  L  K  S  C  D  I  D  Q  K  V  N  E  Q  W  K  R  S  E  K  :  N  N  V  L  L  N  S  V  E  G  L  S  K  N  F  P  E  R  M  S  Q  R  D   : G  L  S  N  K  G  T  P  E  D  G  I  L  M  S  D  K  R  S  G </second_frame>
            <third_frame>   K  E  N  M  K  Q  N  L  S  D  K  A  T  I  L  S  *  E  S  D  E  N  N  S  *  I  V  T  M  I  L  Q  L  S  A  I  G  L  S  W  M  L  Y  Q  M  F  L  K  K  Q  N  L  S  M  *  I  N  L  D  L  T  K  L  T  V  V  E  R  L  N  F  V  T  W  S  L  A  K  R  M  I  G  D  *  R  T  T  F  I  R  W  T  L  V  W  K  L  Q  Y  R  D  R  R  N  I  S  P  L  S :   L  A  K  L  M  H  E  L  *  G  W  L  P  G  C  S  S  W  S  R  S  L  S  R  L  L  P  R  I  T  G  E  F  *  C  L  Y  *  N  H  F  C  G :   H  T  W  R  T  W  P  R  R  M  L  P  R  N  L  M  P  Q  G  K  L  F  W  L  N  L  H  V  I  P  K  R  V  Q  V  G  E  M  R  S  L  N  M  P  M  K  R  Q  R  T  R  K  R  N  K  S  I  E  K  Q  K  I  Q  S :   L  T  V  V  M  N  C  M  C  F  T  M  R  L  W  I  M   : S  H  L  H  L  L  M  M  E  M  I  K  R  V  K  F  L  K  L  V  I  P  *  I  Y  R  K  R  S  T  N  V  *  L  S  L  K  P  R  K  G  S  *  K  K  L  *  S  I  K  E  E  L  R  M  R  L  S  *  N  I  W  L  S  N  I  R  E  L  *  E  Q  F  K  R  I  W  M  Q  L  Q  I  L  S  P  T  R  I  K  S  R  V  L  T  L  T  *  R  V  V  I  L  I  R  K  S  T  S  N  G  R  E  V  R  R :   T  M  Y  Y  *  T  V  *  K  V  F  Q  R  T  F  Q  K  E  C  H  K  E  M  :  D  C  Q  T  K  E  L  Q  R  M  V  Y  *  C  L  I  S  D  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34614" stop="34288"/>
                    <exon start="34193" stop="34065"/>
                    <exon start="33932" stop="33741"/>
                    <exon start="33650" stop="33598"/>
                    <exon start="33483" stop="33141"/>
                    <exon start="32969" stop="32900"/>
                    <exon start="32785" stop="32727"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1173</number_coding_nucleotides>
                  <number_encoded_amino_acids>391</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KREHETEFVRQSYDSILRKRREQLIDSDNDTTIISNRPELDAISNVLKEAESLNVNQFGFDETYGGGTSQFCDLESGEEDDWRLKDYLHQVDSSVEVAIQRQKEHISIELSKIDARIMRVVTGMQQLESKLEPASSQDYRRILVPLLKSFLRAHLEDLAEKDATEKSDATREAFLAELARDSEKSSSWGNEKSKHAHEKTKDKKKKQEYRKAKDSKPNSGNELHVLHHETVDHVSSPLAHDGDDQESEIPQTGNSLDLQEEEYKRMIELEAEERKLEETLEYQRRIENEAKLKHLAEQHKRTVRAVQENMDAVTNPESYPYQKSSPDTYLKSCDIDQKVNEQWKRSEKNNVLLNSVEGLSKNFPERMSQRDGLSNKGTPEDGILMSDKRSG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="36153" PGL_stop="35590"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36153" e_stop="35590"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.956"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.956">
            <gDNA_exon_boundary e_start="36153" e_stop="35590" e_length="564"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36153" stop="35590"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465315" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCTGAAGAGAGAAGAAAAGAGATTGAGGTTCGGGTAGCTGCTGCTAGGCTGTTGCAGCAGAAGTCAGAAACTGTCAAATCACAGAATGATGTAGACAAAGGTTTGGATTCAACTGCAGGATCGGGTCAGAGAGCACGAGATAGGAGGTCCAGCGGAAATGCAAAGAAGAATACTTCTTCCACTGAGAGAAGAAAGTGGGTGCAGTCATATTGGAATTCCATAAGTTTGGATGTGAAGAAAGAATTGCTTAGAATTAGAATTTCAGATCTTAAGACACATTTTACTGCTTCTAAGGATCATTTGGCTATAGAAGTACTCTCTGATGCTCTTCCATTTGCCGAGACCCATAAAACATGGGAGTTCTGGAGATGTTGCCGGTGCAATGAAAATTTTGCTGATTCTCAATCACACGTTCATCATGTTGTGCATGATCACATGGGAGCTTTGCTGCCTAAAATGCAGTCAGTTTTGCCTCAAAATGTTGAGAATGAGTGGGCTGAGATGCTTCTGAACTGTTCTTGGAAACCATTAGATATTAATGCGGCAGTGAAAATGCTAGATAAG</gDNA_template>
            <first_frame> P  E  E  R  R  K  E  I  E  V  R  V  A  A  A  R  L  L  Q  Q  K  S  E  T  V  K  S  Q  N  D  V  D  K  G  L  D  S  T  A  G  S  G  Q  R  A  R  D  R  R  S  S  G  N  A  K  K  N  T  S  S  T  E  R  R  K  W  V  Q  S  Y  W  N  S  I  S  L  D  V  K  K  E  L  L  R  I  R  I  S  D  L  K  T  H  F  T  A  S  K  D  H  L  A  I  E  V  L  S  D  A  L  P  F  A  E  T  H  K  T  W  E  F  W  R  C  C  R  C  N  E  N  F  A  D  S  Q  S  H  V  H  H  V  V  H  D  H  M  G  A  L  L  P  K  M  Q  S  V  L  P  Q  N  V  E  N  E  W  A  E  M  L  L  N  C  S  W  K  P  L  D  I  N  A  A  V  K  M  L  D  K </first_frame>
            <second_frame>  L  K  R  E  E  K  R  L  R  F  G  *  L  L  L  G  C  C  S  R  S  Q  K  L  S  N  H  R  M  M  *  T  K  V  W  I  Q  L  Q  D  R  V  R  E  H  E  I  G  G  P  A  E  M  Q  R  R  I  L  L  P  L  R  E  E  S  G  C  S  H  I  G  I  P  *  V  W  M  *  R  K  N  C  L  E  L  E  F  Q  I  L  R  H  I  L  L  L  L  R  I  I  W  L  *  K  Y  S  L  M  L  F  H  L  P  R  P  I  K  H  G  S  S  G  D  V  A  G  A  M  K  I  L  L  I  L  N  H  T  F  I  M  L  C  M  I  T  W  E  L  C  C  L  K  C  S  Q  F  C  L  K  M  L  R  M  S  G  L  R  C  F  *  T  V  L  G  N  H  *  I  L  M  R  Q  *  K  C  *  I   </second_frame>
            <third_frame>   *  R  E  K  K  R  D  *  G  S  G  S  C  C  *  A  V  A  A  E  V  R  N  C  Q  I  T  E  *  C  R  Q  R  F  G  F  N  C  R  I  G  S  E  S  T  R  *  E  V  Q  R  K  C  K  E  E  Y  F  F  H  *  E  K  K  V  G  A  V  I  L  E  F  H  K  F  G  C  E  E  R  I  A  *  N  *  N  F  R  S  *  D  T  F  Y  C  F  *  G  S  F  G  Y  R  S  T  L  *  C  S  S  I  C  R  D  P  *  N  M  G  V  L  E  M  L  P  V  Q  *  K  F  C  *  F  S  I  T  R  S  S  C  C  A  *  S  H  G  S  F  A  A  *  N  A  V  S  F  A  S  K  C  *  E  *  V  G  *  D  A  S  E  L  F  L  E  T  I  R  Y  *  C  G  S  E  N  A  R  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36153" stop="35590"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>564</number_coding_nucleotides>
                  <number_encoded_amino_acids>188</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PEERRKEIEVRVAAARLLQQKSETVKSQNDVDKGLDSTAGSGQRARDRRSSGNAKKNTSSTERRKWVQSYWNSISLDVKKELLRIRISDLKTHFTASKDHLAIEVLSDALPFAETHKTWEFWRCCRCNENFADSQSHVHHVVHDHMGALLPKMQSVLPQNVENEWAEMLLNCSWKPLDINAAVKMLDK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="61863" PGL_stop="62562"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61863" e_stop="62562"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.916"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.916">
            <gDNA_exon_boundary e_start="61863" e_stop="62562" e_length="700"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61863" stop="62458"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247713" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61888" stop="62562"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E451945" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61888" stop="62329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445675" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61974" stop="62183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445670" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCATACTTTCATTTGTCTCTCTCTTTCATGCATCTGTAATTTGCAAAATCCCCTGTACCCATTACTTCTCTGCTCATAAATCACAGCTTCCTTCTTCTTTTTCTTCTTCCCCCATTCCAAACACCCTTTAAAGTTGCAACCTTTCACTTTCTTGATTTCTTCTTTTCCATTAATTAGTCCCTGCAGATCCCTGATGTAGCCCTTGTTCTTTCACAGCCTGCTCTGAGTTCAATCTCAGCTGGCTTTCTCTTGCCTAAATCACATTCTTGATTCACAAAAATAACAATAGTAAAGATGCAATCTTTGATATTTTTGCTGACCAATTGATAAAGGGGTTTCAAGAATTCTTGTTAATATGGCCTTTGCAGCTCAGCAGAAGAAGGCTATTCATTCCATGTTAGCAAACAAGCTGACCCATCTCAAAATCCCTGACTCTTCTTCATCATCATCTCCTCCTCCTACTGATCCAGACTTTGATTTTTCTGATGTTTTTGGTGCTCCTACCTCTCCTTCATCTTCTTCCAGTTTTCTAACTGACCCACAAATCATTCATAGTAGGTCCCACTCTTTTGTGGGTCCATCTCCAAGGATCACTCTCTCAAAACCTCTGCCTTTTCACCAAGAAGTTGATTCTGAGGGAGAAAGTGATAGTGATAAAGTTAATACTCATGTAGGTACTCACCAAACTGAATGTTCTGA</gDNA_template>
            <first_frame> S  I  L  S  F  V  S  L  F  H  A  S  V  I  C  K  I  P  C  T  H  Y  F  S  A  H  K  S  Q  L  P  S  S  F  S  S  S  P  I  P  N  T  L  *  S  C  N  L  S  L  S  *  F  L  L  F  H  *  L  V  P  A  D  P  *  C  S  P  C  S  F  T  A  C  S  E  F  N  L  S  W  L  S  L  A  *  I  T  F  L  I  H  K  N  N  N  S  K  D  A  I  F  D  I  F  A  D  Q  L  I  K  G  F  Q  E  F  L  L  I  W  P  L  Q  L  S  R  R  R  L  F  I  P  C  *  Q  T  S  *  P  I  S  K  S  L  T  L  L  H  H  H  L  L  L  L  L  I  Q  T  L  I  F  L  M  F  L  V  L  L  P  L  L  H  L  L  P  V  F  *  L  T  H  K  S  F  I  V  G  P  T  L  L  W  V  H  L  Q  G  S  L  S  Q  N  L  C  L  F  T  K  K  L  I  L  R  E  K  V  I  V  I  K  L  I  L  M  *  V  L  T  K  L  N  V  L  </first_frame>
            <second_frame>  P  Y  F  H  L  S  L  S  F  M  H  L  *  F  A  K  S  P  V  P  I  T  S  L  L  I  N  H  S  F  L  L  L  F  L  L  P  P  F  Q  T  P  F  K  V  A  T  F  H  F  L  D  F  F  F  S  I  N  *  S  L  Q  I  P  D  V  A  L  V  L  S  Q  P  A  L  S  S  I  S  A  G  F  L  L  P  K  S  H  S  *  F  T  K  I  T  I  V  K  M  Q  S  L  I  F  L  L  T  N  *  *  R  G  F  K  N  S  C  *  Y  G  L  C  S  S  A  E  E  G  Y  S  F  H  V  S  K  Q  A  D  P  S  Q  N  P  *  L  F  F  I  I  I  S  S  S  Y  *  S  R  L  *  F  F  *  C  F  W  C  S  Y  L  S  F  I  F  F  Q  F  S  N  *  P  T  N  H  S  *  *  V  P  L  F  C  G  S  I  S  K  D  H  S  L  K  T  S  A  F  S  P  R  S  *  F  *  G  R  K  *  *  *  *  S  *  Y  S  C  R  Y  S  P  N  *  M  F  * </second_frame>
            <third_frame>   H  T  F  I  C  L  S  L  S  C  I  C  N  L  Q  N  P  L  Y  P  L  L  L  C  S  *  I  T  A  S  F  F  F  F  F  F  P  H  S  K  H  P  L  K  L  Q  P  F  T  F  L  I  S  S  F  P  L  I  S  P  C  R  S  L  M  *  P  L  F  F  H  S  L  L  *  V  Q  S  Q  L  A  F  S  C  L  N  H  I  L  D  S  Q  K  *  Q  *  *  R  C  N  L  *  Y  F  C  *  P  I  D  K  G  V  S  R  I  L  V  N  M  A  F  A  A  Q  Q  K  K  A  I  H  S  M  L  A  N  K  L  T  H  L  K  I  P  D  S  S  S  S  S  S  P  P  P  T  D  P  D  F  D  F  S  D  V  F  G  A  P  T  S  P  S  S  S  S  S  F  L  T  D  P  Q  I  I  H  S  R  S  H  S  F  V  G  P  S  P  R  I  T  L  S  K  P  L  P  F  H  Q  E  V  D  S  E  G  E  S  D  S  D  K  V  N  T  H  V  G  T  H  Q  T  E  C  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62183" stop="62560"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>378</number_coding_nucleotides>
                  <number_encoded_amino_acids>126</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PIDKGVSRILVNMAFAAQQKKAIHSMLANKLTHLKIPDSSSSSSPPPTDPDFDFSDVFGAPTSPSSSSSFLTDPQIIHSRSHSFVGPSPRITLSKPLPFHQEVDSEGESDSDKVNTHVGTHQTECS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="62632" PGL_stop="64911"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62632" e_stop="62848"/>
            <exon e_start="64361" e_stop="64443"/>
            <exon e_start="64529" e_stop="64649"/>
            <exon e_start="64791" e_stop="64911"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.866" e_score="1.000"/>
          <exon-intron don_prob="0.966" acc_prob="0.790" e_score="1.000"/>
          <exon-intron don_prob="0.901" acc_prob="0.975" e_score="1.000"/>
          <exon-only e_score="0.917"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="62632" e_stop="62848" e_length="217"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.866">
            <gDNA_intron_boundary i_start="62849" i_stop="64360" i_length="1512"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="64361" e_stop="64443" e_length="83"/>
          </exon>
          <intron i_serial="2" don_prob="0.966" acc_prob="0.790">
            <gDNA_intron_boundary i_start="64444" i_stop="64528" i_length="85"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="64529" e_stop="64649" e_length="121"/>
          </exon>
          <intron i_serial="3" don_prob="0.901" acc_prob="0.975">
            <gDNA_intron_boundary i_start="64650" i_stop="64790" i_length="141"/>
          </intron>
          <exon e_serial="4" e_score="0.917">
            <gDNA_exon_boundary e_start="64791" e_stop="64911" e_length="121"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62632" stop="62848"/>
              <exon start="64361" stop="64443"/>
              <exon start="64529" stop="64649"/>
              <exon start="64791" stop="64911"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E557597" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62655" stop="62848"/>
              <exon start="64361" stop="64443"/>
              <exon start="64529" stop="64649"/>
              <exon start="64791" stop="64801"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E224449" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTGAGGATGATTGGAAAAGGTTCTTTTGGGAAGGTTTTTCAGGTGAAGATGAAGGGGTATGGTGGTGAGGGTGAGGGTGATGGAATATTAGCCATGAAAGTGATGAGGAAGGACACAGTAATCAAGAATAACCATGTGGATTATATGAGAGCTGAGAGGGATATTCTCACCAAAGTTGAGCACCCTTTTATTGTGCAGCTTAGATACTCATTTCAG : ACGAAGTCTAAGCTTTACTTGATTTTGGATTTTATAAATGGAGGACATCTTTTCTATCATTTATACAGACAAGGGATTTTCAG : TGAGGACCAGGCAAGGATTTATGCTGCTGAGATAGTTTCTGCTGTTTCACATCTTCACCAGAGAGGGATCGTGCATCGAGACCTCAAACCAGAAAATATTCTCATGGATGGTGATGGACAT : GTCATGCTGACAGATTTTGGACTGGCAAAAGAGATTGATGAATCAAGCAGATCTAATTCAATGTGTGGAACCATGGAATACATGGCTCCGGAGATTATACAGTCCAAGGGCCACAATAAAG</gDNA_template>
            <first_frame> L  E  D  D  W  K  R  F  F  W  E  G  F  S  G  E  D  E  G  V  W  W  *  G  *  G  *  W  N  I  S  H  E  S  D  E  E  G  H  S  N  Q  E  *  P  C  G  L  Y  E  S  *  E  G  Y  S  H  Q  S  *  A  P  F  Y  C  A  A  *  I  L  I  S   : D  E  V  *  A  L  L  D  F  G  F  Y  K  W  R  T  S  F  L  S  F  I  Q  T  R  D  F  Q  :  *  G  P  G  K  D  L  C  C  *  D  S  F  C  C  F  T  S  S  P  E  R  D  R  A  S  R  P  Q  T  R  K  Y  S  H  G  W  *  W  T   : C  H  A  D  R  F  W  T  G  K  R  D  *  *  I  K  Q  I  *  F  N  V  W  N  H  G  I  H  G  S  G  D  Y  T  V  Q  G  P  Q  *   </first_frame>
            <second_frame>  L  R  M  I  G  K  G  S  F  G  K  V  F  Q  V  K  M  K  G  Y  G  G  E  G  E  G  D  G  I  L  A  M  K  V  M  R  K  D  T  V  I  K  N  N  H  V  D  Y  M  R  A  E  R  D  I  L  T  K  V  E  H  P  F  I  V  Q  L  R  Y  S  F  Q  :  T  K  S  K  L  Y  L  I  L  D  F  I  N  G  G  H  L  F  Y  H  L  Y  R  Q  G  I  F  S :   E  D  Q  A  R  I  Y  A  A  E  I  V  S  A  V  S  H  L  H  Q  R  G  I  V  H  R  D  L  K  P  E  N  I  L  M  D  G  D  G  H  :  V  M  L  T  D  F  G  L  A  K  E  I  D  E  S  S  R  S  N  S  M  C  G  T  M  E  Y  M  A  P  E  I  I  Q  S  K  G  H  N  K  </second_frame>
            <third_frame>   *  G  *  L  E  K  V  L  L  G  R  F  F  R  *  R  *  R  G  M  V  V  R  V  R  V  M  E  Y  *  P  *  K  *  *  G  R  T  Q  *  S  R  I  T  M  W  I  I  *  E  L  R  G  I  F  S  P  K  L  S  T  L  L  L  C  S  L  D  T  H  F  R :   R  S  L  S  F  T  *  F  W  I  L  *  M  E  D  I  F  S  I  I  Y  T  D  K  G  F  S   : V  R  T  R  Q  G  F  M  L  L  R  *  F  L  L  F  H  I  F  T  R  E  G  S  C  I  E  T  S  N  Q  K  I  F  S  W  M  V  M  D  M :   S  C  *  Q  I  L  D  W  Q  K  R  L  M  N  Q  A  D  L  I  Q  C  V  E  P  W  N  T  W  L  R  R  L  Y  S  P  R  A  T  I  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62633" stop="62848"/>
                    <exon start="64361" stop="64443"/>
                    <exon start="64529" stop="64649"/>
                    <exon start="64791" stop="64910"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>540</number_coding_nucleotides>
                  <number_encoded_amino_acids>180</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LRMIGKGSFGKVFQVKMKGYGGEGEGDGILAMKVMRKDTVIKNNHVDYMRAERDILTKVEHPFIVQLRYSFQTKSKLYLILDFINGGHLFYHLYRQGIFSEDQARIYAAEIVSAVSHLHQRGIVHRDLKPENILMDGDGHVMLTDFGLAKEIDESSRSNSMCGTMEYMAPEIIQSKGHNK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="65438" PGL_stop="65829"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65438" e_stop="65829"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="65438" e_stop="65829" e_length="392"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65438" stop="65829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E221365" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65505" stop="65829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220988" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GATCAAAAGTCACAAGTGGTTCCGCACAATCAACTGGAAGAAACTTGATGCCAGAGAACTACAGCCTAAGTTCAAACCAGATGTAATTGGCAGAGATTGCACAGCCAATTTCGATAAATGTTGGACTACGATGCCACCGGATGACTCACCAGCATCTACTCCGACAACAGGCGAACACTTTCAAGGTTACACTTATGTAGCACCAAATCCTTGGCTCTCCTCTAGTTGATTTAAGTCTTTATCCTGACAAAATTCCGAACTTTTAGTTTGCTATTGTAAGTCATTCTTTTTTAGAGAGAGGATCATGAGAAGTGTATGGATCAGATTGTATCATGATAAAAGCAAATCTTTCTAACTCTTTTTGTGTACTATTGTAAGCTCAATTCTTCTTT</gDNA_template>
            <first_frame> D  Q  K  S  Q  V  V  P  H  N  Q  L  E  E  T  *  C  Q  R  T  T  A  *  V  Q  T  R  C  N  W  Q  R  L  H  S  Q  F  R  *  M  L  D  Y  D  A  T  G  *  L  T  S  I  Y  S  D  N  R  R  T  L  S  R  L  H  L  C  S  T  K  S  L  A  L  L  *  L  I  *  V  F  I  L  T  K  F  R  T  F  S  L  L  L  *  V  I  L  F  *  R  E  D  H  E  K  C  M  D  Q  I  V  S  *  *  K  Q  I  F  L  T  L  F  V  Y  Y  C  K  L  N  S  S   </first_frame>
            <second_frame>  I  K  S  H  K  W  F  R  T  I  N  W  K  K  L  D  A  R  E  L  Q  P  K  F  K  P  D  V  I  G  R  D  C  T  A  N  F  D  K  C  W  T  T  M  P  P  D  D  S  P  A  S  T  P  T  T  G  E  H  F  Q  G  Y  T  Y  V  A  P  N  P  W  L  S  S  S  *  F  K  S  L  S  *  Q  N  S  E  L  L  V  C  Y  C  K  S  F  F  F  R  E  R  I  M  R  S  V  W  I  R  L  Y  H  D  K  S  K  S  F  *  L  F  L  C  T  I  V  S  S  I  L  L  </second_frame>
            <third_frame>   S  K  V  T  S  G  S  A  Q  S  T  G  R  N  L  M  P  E  N  Y  S  L  S  S  N  Q  M  *  L  A  E  I  A  Q  P  I  S  I  N  V  G  L  R  C  H  R  M  T  H  Q  H  L  L  R  Q  Q  A  N  T  F  K  V  T  L  M  *  H  Q  I  L  G  S  P  L  V  D  L  S  L  Y  P  D  K  I  P  N  F  *  F  A  I  V  S  H  S  F  L  E  R  G  S  *  E  V  Y  G  S  D  C  I  M  I  K  A  N  L  S  N  S  F  C  V  L  L  *  A  Q  F  F  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65439" stop="65666"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKSHKWFRTINWKKLDARELQPKFKPDVIGRDCTANFDKCWTTMPPDDSPASTPTTGEHFQGYTYVAPNPWLSSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="69515" PGL_stop="70118"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69515" e_stop="70118"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="69515" e_stop="70118" e_length="604"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69515" stop="70118"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308760" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTCCTTACAACCCATACACTAGGATTCAAGAAAATCATAATTGCTGCCTAACACATGCACCCAATCAGGATTTGGATAATGTTATCACATGGTCAGCTCATACAACCACCCACATACATATCTATAGGACCACTCTTCATCAAAGATGGTATCTTCATTGTGTTTTTCCATGGAAAACTACTTTAGTAGTAGGGATTTTGATGTTATAAATAAGAGTAGCATTAAATAGGTACCACAAAGCATGACATATTTCTGGTCTGTACAAATCAGGACCAAAAGTCTAGTCAATTAATCACATATGGATATCTCCTTACATAAACTTTTCCTCAATATATAAGATTAATATAATTATGAACCCAGCTTACTCACTCTTTGTCCTAGTTTTTTCTTCTTCTTTTTTTTCTTTCTCCAGAGATCCTTTGATCTCTCTCATGCCACACGGATGATGCTTTCTCCATTACTGAAACTTGACATCACATTATATGCCGAGTGTCTAGTAGATGATGCTTGTCCCTGATCAAGTGACAATGATAATCTCAGTGACAACGACGATGGCTCGATTGTTGAATTGTGGTTGGCGTTAAGGTCGATCGATTTTGATGGA</gDNA_template>
            <first_frame> V  L  T  T  H  T  L  G  F  K  K  I  I  I  A  A  *  H  M  H  P  I  R  I  W  I  M  L  S  H  G  Q  L  I  Q  P  P  T  Y  I  S  I  G  P  L  F  I  K  D  G  I  F  I  V  F  F  H  G  K  L  L  *  *  *  G  F  *  C  Y  K  *  E  *  H  *  I  G  T  T  K  H  D  I  F  L  V  C  T  N  Q  D  Q  K  S  S  Q  L  I  T  Y  G  Y  L  L  T  *  T  F  P  Q  Y  I  R  L  I  *  L  *  T  Q  L  T  H  S  L  S  *  F  F  L  L  L  F  F  L  S  P  E  I  L  *  S  L  S  C  H  T  D  D  A  F  S  I  T  E  T  *  H  H  I  I  C  R  V  S  S  R  *  C  L  S  L  I  K  *  Q  *  *  S  Q  *  Q  R  R  W  L  D  C  *  I  V  V  G  V  K  V  D  R  F  *  W  </first_frame>
            <second_frame>  S  L  Q  P  I  H  *  D  S  R  K  S  *  L  L  P  N  T  C  T  Q  S  G  F  G  *  C  Y  H  M  V  S  S  Y  N  H  P  H  T  Y  L  *  D  H  S  S  S  K  M  V  S  S  L  C  F  S  M  E  N  Y  F  S  S  R  D  F  D  V  I  N  K  S  S  I  K  *  V  P  Q  S  M  T  Y  F  W  S  V  Q  I  R  T  K  S  L  V  N  *  S  H  M  D  I  S  L  H  K  L  F  L  N  I  *  D  *  Y  N  Y  E  P  S  L  L  T  L  C  P  S  F  F  F  F  F  F  F  F  L  Q  R  S  F  D  L  S  H  A  T  R  M  M  L  S  P  L  L  K  L  D  I  T  L  Y  A  E  C  L  V  D  D  A  C  P  *  S  S  D  N  D  N  L  S  D  N  D  D  G  S  I  V  E  L  W  L  A  L  R  S  I  D  F  D  G </second_frame>
            <third_frame>   P  Y  N  P  Y  T  R  I  Q  E  N  H  N  C  C  L  T  H  A  P  N  Q  D  L  D  N  V  I  T  W  S  A  H  T  T  T  H  I  H  I  Y  R  T  T  L  H  Q  R  W  Y  L  H  C  V  F  P  W  K  T  T  L  V  V  G  I  L  M  L  *  I  R  V  A  L  N  R  Y  H  K  A  *  H  I  S  G  L  Y  K  S  G  P  K  V  *  S  I  N  H  I  W  I  S  P  Y  I  N  F  S  S  I  Y  K  I  N  I  I  M  N  P  A  Y  S  L  F  V  L  V  F  S  S  S  F  F  S  F  S  R  D  P  L  I  S  L  M  P  H  G  *  C  F  L  H  Y  *  N  L  T  S  H  Y  M  P  S  V  *  *  M  M  L  V  P  D  Q  V  T  M  I  I  S  V  T  T  T  M  A  R  L  L  N  C  G  W  R  *  G  R  S  I  L  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69517" stop="69723"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PYNPYTRIQENHNCCLTHAPNQDLDNVITWSAHTTTHIHIYRTTLHQRWYLHCVFPWKTTLVVGILML*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="71877" PGL_stop="69673"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="71877" e_stop="71467"/>
            <exon e_start="71030" e_stop="70822"/>
            <exon e_start="70357" e_stop="69696"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="71877" e_stop="71467" e_length="411"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.964">
            <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="71030" e_stop="70822" e_length="209"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.994">
            <gDNA_intron_boundary i_start="70821" i_stop="70358" i_length="464"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="70357" e_stop="69696" e_length="662"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71877" stop="71467"/>
              <exon start="71030" stop="70931"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207768" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71875" stop="71467"/>
              <exon start="71030" stop="70822"/>
              <exon start="70357" stop="70098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704059" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71872" stop="71467"/>
              <exon start="71030" stop="70822"/>
              <exon start="70357" stop="70283"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E590958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71872" stop="71467"/>
              <exon start="71030" stop="70822"/>
              <exon start="70357" stop="70335"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E590623" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71871" stop="71467"/>
              <exon start="71030" stop="70904"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306754" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71871" stop="71467"/>
              <exon start="71030" stop="70951"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250383" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71870" stop="71467"/>
              <exon start="71030" stop="70891"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246138" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71868" stop="71467"/>
              <exon start="71030" stop="70891"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253880" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71866" stop="71467"/>
              <exon start="71030" stop="70822"/>
              <exon start="70357" stop="70076"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731864" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71866" stop="71467"/>
              <exon start="71030" stop="70822"/>
              <exon start="70357" stop="70116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728009" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71866" stop="71467"/>
              <exon start="71030" stop="70822"/>
              <exon start="70357" stop="70122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705000" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71866" stop="71467"/>
              <exon start="71030" stop="70822"/>
              <exon start="70357" stop="70203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731203" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71866" stop="71467"/>
              <exon start="71030" stop="70822"/>
              <exon start="70357" stop="70284"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728017" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71865" stop="71467"/>
              <exon start="71030" stop="70822"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211740" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71865" stop="71539"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313959" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71864" stop="71510"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697373" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71862" stop="71467"/>
              <exon start="71030" stop="70857"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71861" stop="71467"/>
              <exon start="71030" stop="70822"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E463806" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71861" stop="71467"/>
              <exon start="71030" stop="70892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562943" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71861" stop="71518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E463973" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71861" stop="71543"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476061" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71861" stop="71597"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291323" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71860" stop="71467"/>
              <exon start="71030" stop="70866"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561501" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71859" stop="71467"/>
              <exon start="71030" stop="70822"/>
              <exon start="70357" stop="70010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E378167" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71859" stop="71467"/>
              <exon start="71030" stop="70833"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71859" stop="71467"/>
              <exon start="71030" stop="70842"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368402" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71855" stop="71467"/>
              <exon start="71030" stop="70822"/>
              <exon start="70357" stop="70217"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576082" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71849" stop="71467"/>
              <exon start="71030" stop="70822"/>
              <exon start="70357" stop="70310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E584467" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71849" stop="71602"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E584472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71846" stop="71467"/>
              <exon start="71030" stop="70822"/>
              <exon start="70357" stop="70333"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581669" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71846" stop="71467"/>
              <exon start="71030" stop="70962"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476652" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71840" stop="71467"/>
              <exon start="71030" stop="70822"/>
              <exon start="70357" stop="70074"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730228" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71839" stop="71467"/>
              <exon start="71030" stop="70968"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450422" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71835" stop="71467"/>
              <exon start="71030" stop="70822"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450405" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71831" stop="71467"/>
              <exon start="71030" stop="70919"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473523" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71820" stop="71467"/>
              <exon start="71030" stop="70822"/>
              <exon start="70357" stop="70152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698939" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71756" stop="71467"/>
              <exon start="71030" stop="70822"/>
              <exon start="70357" stop="70031"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709928" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71709" stop="71467"/>
              <exon start="71030" stop="70822"/>
              <exon start="70357" stop="70222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E584469" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71706" stop="71467"/>
              <exon start="71030" stop="70822"/>
              <exon start="70357" stop="70310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573632" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71704" stop="71467"/>
              <exon start="71030" stop="70822"/>
              <exon start="70357" stop="70032"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317204" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71701" stop="71467"/>
              <exon start="71030" stop="70822"/>
              <exon start="70357" stop="70169"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561790" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71674" stop="71467"/>
              <exon start="71030" stop="70822"/>
              <exon start="70357" stop="70252"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265388" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71631" stop="71467"/>
              <exon start="71030" stop="70822"/>
              <exon start="70357" stop="69922"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E591848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71628" stop="71467"/>
              <exon start="71030" stop="70822"/>
              <exon start="70357" stop="70118"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277016" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71580" stop="71467"/>
              <exon start="71030" stop="70953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265256" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71013" stop="70822"/>
              <exon start="70357" stop="69748"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589486" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70970" stop="70822"/>
              <exon start="70357" stop="69829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E617746" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70953" stop="70822"/>
              <exon start="70357" stop="69696"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551701" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70918" stop="70822"/>
              <exon start="70357" stop="69748"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E591495" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70908" stop="70822"/>
              <exon start="70357" stop="69756"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368401" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70877" stop="70822"/>
              <exon start="70357" stop="69901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E696933" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70877" stop="70822"/>
              <exon start="70357" stop="69908"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E693093" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70841" stop="70822"/>
              <exon start="70357" stop="69906"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269158" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70357" stop="69748"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E432323" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70357" stop="69910"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576816" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70198" stop="69711"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241791" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70167" stop="69909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611363" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70099" stop="69821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E596595" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70062" stop="69705"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575058" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCGGGTTTTTCTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG : GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCG : GTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAAAGAAGAAGAAAAAACTAGGACAAAGAGTGAGTAAGCTGGGTTCATAATTATATTAATCTTATATATTGAGGAAAAGTTTATGTAAGGAGATATCCATATGTGATTAATTGACTAGACTTTTGGTCCTGATTTGTACAGACCAGAAATATGTCATGCTTTGTGGTACCTATTTAATGCTACTCTTATTTATAACATCAAAATCCCTACTACTAAA</gDNA_template>
            <first_frame> F  G  F  F  F  L  S  I  S  I  G  V  Y  G  F  Q  L  T  K  C  M  F  S  H  Q  H  F  V  *  I  D  F  F  I  D  S  W  N  L  P  E  R  C  R  A  F  A  V  I  S  R  R  R  R  R  R  *  P  A  A  V  L  E  E  K  S  C  C  L  V  *  E  *  K  W  I  L  *  G  R  A  *  V  *  T  I  F  H  S  T  S  N  R  M  L  T  T  T  T  T  T  A  A  V  I  T  M  N  P  L  K  W  R  R  M  K  V  M  P  L  Q  M  T  R  F  N  I  S  P  T  V  V  A  S  V  R  E  :  E  F  R  G  Q  R  K  S  I  S  Y  S  F  *  D  C  K  K  L  E  K  E  T  G  E  E  S  L  V  T  S  *  R  L  A  H  R  H  R  L  Q  V  M  L  R  N  T  S  S  G  E  A  T  S  T  V  A  A  V  D  L  A  S  L  I  S  P  L  T  R :   Y  Q  *  C  Q  *  K  R  W  K  I  S  K  K  S  Q  F  Q  H  Q  Q  H  Y  L  L  *  K  L  P  K  P  M  H  F  R  W  H  R  L  L  L  L  S  Y  F  Q  Y  R  L  I  S  Q  E  R  I  Q  L  C  F  D  M  I  M  R  I  H  R  C  *  L  V  L  F  L  C  F  Q  C  L  I  H  Q  N  R  S  T  L  T  P  T  T  I  Q  Q  S  S  H  R  R  C  H  *  D  Y  H  C  H  L  I  R  D  K  H  H  L  L  D  T  R  H  I  M  *  C  Q  V  S  V  M  E  K  A  S  S  V  W  H  E  R  D  Q  R  I  S  G  E  R  K  K  R  R  R  K  N  *  D  K  E  *  V  S  W  V  H  N  Y  I  N  L  I  Y  *  G  K  V  Y  V  R  R  Y  P  Y  V  I  N  *  L  D  F  W  S  *  F  V  Q  T  R  N  M  S  C  F  V  V  P  I  *  C  Y  S  Y  L  *  H  Q  N  P  Y  Y  *  </first_frame>
            <second_frame>  S  G  F  S  S  F  Q  F  Q  *  V  C  T  V  F  N  *  R  S  V  C  L  V  I  N  T  L  Y  K  L  I  F  L  L  I  R  G  I  F  Q  K  D  V  E  R  L  Q  *  *  V  V  V  D  A  G  G  N  R  R  R  F  W  R  R  N  H  V  V  W  C  E  S  K  S  G  S  Y  E  E  E  R  E  S  E  R  S  F  T  V  R  A  T  E  C  *  Q  Q  Q  Q  Q  R  R  R  *  *  Q  *  I  L  *  S  G  A  G  *  R  L  C  L  C  R  *  R  G  S  T  S  V  Q  Q  W  S  R  A  *  E  R :   S  S  V  D  R  G  R  A  *  V  I  P  F  R  I  A  K  S  W  K  R  R  L  E  R  N  L  S  *  L  R  K  D  S  H  T  D  T  G  C  K  S  C  S  E  I  L  P  P  A  K  Q  P  Q  P  S  P  P  S  I  *  P  L  *  Y  H  H  *  L   : G  I  S  N  A  N  R  R  G  G  K  *  A  R  N  P  S  S  S  T  S  N  I  T  S  C  R  N  Y  Q  N  Q  C  I  F  G  G  T  G  C  C  S  Y  H  I  S  S  T  G  *  *  V  K  R  E  S  N  S  V  S  T  *  S  C  E  F  I  D  A  S  W  S  C  S  Y  V  F  N  A  *  S  I  K  I  D  R  P  *  R  Q  P  Q  F  N  N  R  A  I  V  V  V  T  E  I  I  I  V  T  *  S  G  T  S  I  I  Y  *  T  L  G  I  *  C  D  V  K  F  Q  *  W  R  K  H  H  P  C  G  M  R  E  I  K  G  S  L  E  K  E  K  K  E  E  E  K  T  R  T  K  S  E  *  A  G  F  I  I  I  L  I  L  Y  I  E  E  K  F  M  *  G  D  I  H  M  *  L  I  D  *  T  F  G  P  D  L  Y  R  P  E  I  C  H  A  L  W  Y  L  F  N  A  T  L  I  Y  N  I  K  I  P  T  T  K </second_frame>
            <third_frame>   R  V  F  L  P  F  N  F  N  R  C  V  R  F  S  I  D  E  V  Y  V  *  S  S  T  L  C  I  N  *  F  F  Y  *  F  V  E  S  S  R  K  M  S  S  V  C  S  D  K  S  S  S  T  P  A  V  T  G  G  G  F  G  G  E  I  M  L  F  G  V  R  V  K  V  D  P  M  R  K  S  V  S  L  N  D  L  S  Q  Y  E  Q  P  N  A  N  N  N  N  N  N  G  G  G  D  N  N  E  S  S  K  V  A  Q  D  E  G  Y  A  S  A  D  D  A  V  Q  H  Q  S  N  S  G  R  E  R  K  R   : G  V  P  W  T  E  E  E  H  K  L  F  L  L  G  L  Q  K  V  G  K  G  D  W  R  G  I  S  R  N  F  V  K  T  R  T  P  T  Q  V  A  S  H  A  Q  K  Y  F  L  R  R  S  N  L  N  R  R  R  R  R  S  S  L  F  D  I  T  T  D  S  :  V  S  V  M  P  I  E  E  V  E  N  K  Q  E  I  P  V  P  A  P  A  T  L  P  P  V  E  T  T  K  T  N  A  F  S  V  A  P  A  V  A  P  I  I  F  P  V  Q  V  N  K  S  R  E  N  P  T  L  F  R  H  D  H  A  N  S  S  M  L  V  G  P  V  P  M  F  S  M  P  N  P  S  K  S  I  D  L  N  A  N  H  N  S  T  I  E  P  S  S  L  S  L  R  L  S  L  S  L  D  Q  G  Q  A  S  S  T  R  H  S  A  Y  N  V  M  S  S  F  S  N  G  E  S  I  I  R  V  A  *  E  R  S  K  D  L  W  R  K  K  K  K  K  K  K  K  L  G  Q  R  V  S  K  L  G  S  *  L  Y  *  S  Y  I  L  R  K  S  L  C  K  E  I  S  I  C  D  *  L  T  R  L  L  V  L  I  C  T  D  Q  K  Y  V  M  L  C  G  T  Y  L  M  L  L  L  F  I  T  S  K  S  L  L  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71773" stop="71467"/>
                    <exon start="71030" stop="70822"/>
                    <exon start="70357" stop="69944"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>927</number_coding_nucleotides>
                  <number_encoded_amino_acids>309</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FVESSRKMSSVCSDKSSSTPAVTGGGFGGEIMLFGVRVKVDPMRKSVSLNDLSQYEQPNANNNNNNGGGDNNESSKVAQDEGYASADDAVQHQSNSGRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDSVSVMPIEEVENKQEIPVPAPATLPPVETTKTNAFSVAPAVAPIIFPVQVNKSRENPTLFRHDHANSSMLVGPVPMFSMPNPSKSIDLNANHNSTIEPSSLSLRLSLSLDQGQASSTRHSAYNVMSSFSNGESIIRVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="71877" e_stop="71467"/>
            <exon e_start="71030" e_stop="69673"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.964" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="71877" e_stop="71467" e_length="411"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.964">
            <gDNA_intron_boundary i_start="71466" i_stop="71031" i_length="436"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="71030" e_stop="69673" e_length="1358"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71877" stop="71467"/>
              <exon start="71030" stop="70931"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207768" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71871" stop="71467"/>
              <exon start="71030" stop="70904"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306754" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71871" stop="71467"/>
              <exon start="71030" stop="70951"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250383" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71870" stop="71467"/>
              <exon start="71030" stop="70891"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246138" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71868" stop="71467"/>
              <exon start="71030" stop="70891"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253880" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71865" stop="71467"/>
              <exon start="71030" stop="70822"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211740" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71865" stop="71539"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313959" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71864" stop="71510"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697373" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71862" stop="71467"/>
              <exon start="71030" stop="70857"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71861" stop="71467"/>
              <exon start="71030" stop="70822"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E463806" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71861" stop="71467"/>
              <exon start="71030" stop="70892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562943" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71861" stop="71518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E463973" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71861" stop="71543"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476061" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71861" stop="71597"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291323" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71860" stop="71467"/>
              <exon start="71030" stop="70866"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561501" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71859" stop="71467"/>
              <exon start="71030" stop="70833"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71859" stop="71467"/>
              <exon start="71030" stop="70842"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368402" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71849" stop="71602"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E584472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71846" stop="71467"/>
              <exon start="71030" stop="70962"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476652" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71839" stop="71467"/>
              <exon start="71030" stop="70968"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450422" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71835" stop="71467"/>
              <exon start="71030" stop="70822"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450405" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71831" stop="71467"/>
              <exon start="71030" stop="70919"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473523" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71580" stop="71467"/>
              <exon start="71030" stop="70953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265256" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70856" stop="70040"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551804" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70856" stop="70117"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E556389" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70843" stop="70161"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392259" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70842" stop="70364"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70842" stop="70491"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240851" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70458" stop="69763"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392495" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70358" stop="69673"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E556560" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70357" stop="69748"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E432323" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70357" stop="69910"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576816" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70198" stop="69711"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241791" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70167" stop="69909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611363" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70099" stop="69821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E596595" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70062" stop="69705"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575058" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCGGGTTTTTCTTCCTTTCAATTTCAATAGGTGTGTACGGTTTTCAATTGACGAAGTGTATGTTTAGTCATCAACACTTTGTATAAATTGATTTTTTTATTGATTCGTGGAATCTTCCAGAAAGATGTCGAGCGTTTGCAGTGATAAGTCGTCGTCGACGCCGGCGGTAACCGGCGGCGGTTTTGGAGGAGAAATCATGTTGTTTGGTGTGAGAGTAAAAGTGGATCCTATGAGGAAGAGCGTGAGTCTGAACGATCTTTCACAGTACGAGCAACCGAATGCTAACAACAACAACAACAACGGCGGCGGTGATAACAATGAATCCTCTAAAGTGGCGCAGGATGAAGGTTATGCCTCTGCAGATGACGCGGTTCAACATCAGTCCAACAGTGGTCGCGAGCGTAAGAGAG : GAGTTCCGTGGACAGAGGAAGAGCATAAGTTATTCCTTTTAGGATTGCAAAAAGTTGGAAAAGGAGACTGGAGAGGAATCTCTCGTAACTTCGTAAAGACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATACTTCCTCCGGCGAAGCAACCTCAACCGTCGCCGCCGTCGATCTAGCCTCTTTGATATCACCACTGACTCGGTATTCATTTTTTATTCATGTCTTCCATTTATCAAACTTGTTTCTCACCCTTATTATTAATCGAGTGAAATCTAACAATTTCTTTGAATTACTACAATTATATTTCTCTCATTTTGCCATTTATTGGTGAATTTCCTTTGAGTAGGTGGTAAGTGATTGTGTATAGAGAGAGAAAATTAGATGGTTTGATTTTAATACTTCGATCTTATCACTCTTTAACAGAAGGAGTAGTAATGTGATTCTTTCATTGTTCTTGTTTTGAATTGATATTGATGCTGGGTTTTTGTTGTTATTCTTTTGTGTCTTTTCTCTAATAGATTCTTTTTCATTGGTGTCAAGTTCTTTGTTTATACTTGCCTTCTGGAAAAGATAGAAATATTGAATTCTGATGAATACAAACTGCCACTTGGATATTTTGTTTTTCAGATTTTCCATTTCTAAGGTTCTCTTTCTATGACAAGCAGGTATCAGTAATGCCAATAGAAGAGGTGGAAAATAAGCAAGAAATCCCAGTTCCAGCACCAGCAACATTACCTCCTGTAGAAACTACCAAAACCAATGCATTTTCGGTGGCACCGGCTGTTGCTCCTATCATATTTCCAGTACAGGTTAATAAGTCAAGAGAGAATCCAACTCTGTTTCGACATGATCATGCGAATTCATCGATGCTAGTTGGTCCTGTTCCTATGTTTTCAATGCCTAATCCATCAAAATCGATCGACCTTAACGCCAACCACAATTCAACAATCGAGCCATCGTCGTTGTCACTGAGATTATCATTGTCACTTGATCAGGGACAAGCATCATCTACTAGACACTCGGCATATAATGTGATGTCAAGTTTCAGTAATGGAGAAAGCATCATCCGTGTGGCATGAGAGAGATCAAAGGATCTCTGGAGAAAGAAAAAAAAGAAGAAGAAAAAACTAGGACAAAGAGTGAGTAAGCTGGGTTCATAATTATATTAATCTTATATATTGAGGAAAAGTTTATGTAAGGAGATATCCATATGTGATTAATTGACTAGACTTTTGGTCCTGATTTGTACAGACCAGAAATATGTCATGCTTTGTGGTACCTATTTAATGCTACTCTTATTTATAACATCAAAATCCCTACTACTAAAGTAGTTTTCCATGGAAAAACACA</gDNA_template>
            <first_frame> F  G  F  F  F  L  S  I  S  I  G  V  Y  G  F  Q  L  T  K  C  M  F  S  H  Q  H  F  V  *  I  D  F  F  I  D  S  W  N  L  P  E  R  C  R  A  F  A  V  I  S  R  R  R  R  R  R  *  P  A  A  V  L  E  E  K  S  C  C  L  V  *  E  *  K  W  I  L  *  G  R  A  *  V  *  T  I  F  H  S  T  S  N  R  M  L  T  T  T  T  T  T  A  A  V  I  T  M  N  P  L  K  W  R  R  M  K  V  M  P  L  Q  M  T  R  F  N  I  S  P  T  V  V  A  S  V  R  E  :  E  F  R  G  Q  R  K  S  I  S  Y  S  F  *  D  C  K  K  L  E  K  E  T  G  E  E  S  L  V  T  S  *  R  L  A  H  R  H  R  L  Q  V  M  L  R  N  T  S  S  G  E  A  T  S  T  V  A  A  V  D  L  A  S  L  I  S  P  L  T  R  Y  S  F  F  I  H  V  F  H  L  S  N  L  F  L  T  L  I  I  N  R  V  K  S  N  N  F  F  E  L  L  Q  L  Y  F  S  H  F  A  I  Y  W  *  I  S  F  E  *  V  V  S  D  C  V  *  R  E  K  I  R  W  F  D  F  N  T  S  I  L  S  L  F  N  R  R  S  S  N  V  I  L  S  L  F  L  F  *  I  D  I  D  A  G  F  L  L  L  F  F  C  V  F  S  L  I  D  S  F  S  L  V  S  S  S  L  F  I  L  A  F  W  K  R  *  K  Y  *  I  L  M  N  T  N  C  H  L  D  I  L  F  F  R  F  S  I  S  K  V  L  F  L  *  Q  A  G  I  S  N  A  N  R  R  G  G  K  *  A  R  N  P  S  S  S  T  S  N  I  T  S  C  R  N  Y  Q  N  Q  C  I  F  G  G  T  G  C  C  S  Y  H  I  S  S  T  G  *  *  V  K  R  E  S  N  S  V  S  T  *  S  C  E  F  I  D  A  S  W  S  C  S  Y  V  F  N  A  *  S  I  K  I  D  R  P  *  R  Q  P  Q  F  N  N  R  A  I  V  V  V  T  E  I  I  I  V  T  *  S  G  T  S  I  I  Y  *  T  L  G  I  *  C  D  V  K  F  Q  *  W  R  K  H  H  P  C  G  M  R  E  I  K  G  S  L  E  K  E  K  K  E  E  E  K  T  R  T  K  S  E  *  A  G  F  I  I  I  L  I  L  Y  I  E  E  K  F  M  *  G  D  I  H  M  *  L  I  D  *  T  F  G  P  D  L  Y  R  P  E  I  C  H  A  L  W  Y  L  F  N  A  T  L  I  Y  N  I  K  I  P  T  T  K  V  V  F  H  G  K  T   </first_frame>
            <second_frame>  S  G  F  S  S  F  Q  F  Q  *  V  C  T  V  F  N  *  R  S  V  C  L  V  I  N  T  L  Y  K  L  I  F  L  L  I  R  G  I  F  Q  K  D  V  E  R  L  Q  *  *  V  V  V  D  A  G  G  N  R  R  R  F  W  R  R  N  H  V  V  W  C  E  S  K  S  G  S  Y  E  E  E  R  E  S  E  R  S  F  T  V  R  A  T  E  C  *  Q  Q  Q  Q  Q  R  R  R  *  *  Q  *  I  L  *  S  G  A  G  *  R  L  C  L  C  R  *  R  G  S  T  S  V  Q  Q  W  S  R  A  *  E  R :   S  S  V  D  R  G  R  A  *  V  I  P  F  R  I  A  K  S  W  K  R  R  L  E  R  N  L  S  *  L  R  K  D  S  H  T  D  T  G  C  K  S  C  S  E  I  L  P  P  A  K  Q  P  Q  P  S  P  P  S  I  *  P  L  *  Y  H  H  *  L  G  I  H  F  L  F  M  S  S  I  Y  Q  T  C  F  S  P  L  L  L  I  E  *  N  L  T  I  S  L  N  Y  Y  N  Y  I  S  L  I  L  P  F  I  G  E  F  P  L  S  R  W  *  V  I  V  Y  R  E  R  K  L  D  G  L  I  L  I  L  R  S  Y  H  S  L  T  E  G  V  V  M  *  F  F  H  C  S  C  F  E  L  I  L  M  L  G  F  C  C  Y  S  F  V  S  F  L  *  *  I  L  F  H  W  C  Q  V  L  C  L  Y  L  P  S  G  K  D  R  N  I  E  F  *  *  I  Q  T  A  T  W  I  F  C  F  S  D  F  P  F  L  R  F  S  F  Y  D  K  Q  V  S  V  M  P  I  E  E  V  E  N  K  Q  E  I  P  V  P  A  P  A  T  L  P  P  V  E  T  T  K  T  N  A  F  S  V  A  P  A  V  A  P  I  I  F  P  V  Q  V  N  K  S  R  E  N  P  T  L  F  R  H  D  H  A  N  S  S  M  L  V  G  P  V  P  M  F  S  M  P  N  P  S  K  S  I  D  L  N  A  N  H  N  S  T  I  E  P  S  S  L  S  L  R  L  S  L  S  L  D  Q  G  Q  A  S  S  T  R  H  S  A  Y  N  V  M  S  S  F  S  N  G  E  S  I  I  R  V  A  *  E  R  S  K  D  L  W  R  K  K  K  K  K  K  K  K  L  G  Q  R  V  S  K  L  G  S  *  L  Y  *  S  Y  I  L  R  K  S  L  C  K  E  I  S  I  C  D  *  L  T  R  L  L  V  L  I  C  T  D  Q  K  Y  V  M  L  C  G  T  Y  L  M  L  L  L  F  I  T  S  K  S  L  L  L  K  *  F  S  M  E  K  H  </second_frame>
            <third_frame>   R  V  F  L  P  F  N  F  N  R  C  V  R  F  S  I  D  E  V  Y  V  *  S  S  T  L  C  I  N  *  F  F  Y  *  F  V  E  S  S  R  K  M  S  S  V  C  S  D  K  S  S  S  T  P  A  V  T  G  G  G  F  G  G  E  I  M  L  F  G  V  R  V  K  V  D  P  M  R  K  S  V  S  L  N  D  L  S  Q  Y  E  Q  P  N  A  N  N  N  N  N  N  G  G  G  D  N  N  E  S  S  K  V  A  Q  D  E  G  Y  A  S  A  D  D  A  V  Q  H  Q  S  N  S  G  R  E  R  K  R   : G  V  P  W  T  E  E  E  H  K  L  F  L  L  G  L  Q  K  V  G  K  G  D  W  R  G  I  S  R  N  F  V  K  T  R  T  P  T  Q  V  A  S  H  A  Q  K  Y  F  L  R  R  S  N  L  N  R  R  R  R  R  S  S  L  F  D  I  T  T  D  S  V  F  I  F  Y  S  C  L  P  F  I  K  L  V  S  H  P  Y  Y  *  S  S  E  I  *  Q  F  L  *  I  T  T  I  I  F  L  S  F  C  H  L  L  V  N  F  L  *  V  G  G  K  *  L  C  I  E  R  E  N  *  M  V  *  F  *  Y  F  D  L  I  T  L  *  Q  K  E  *  *  C  D  S  F  I  V  L  V  L  N  *  Y  *  C  W  V  F  V  V  I  L  L  C  L  F  S  N  R  F  F  F  I  G  V  K  F  F  V  Y  T  C  L  L  E  K  I  E  I  L  N  S  D  E  Y  K  L  P  L  G  Y  F  V  F  Q  I  F  H  F  *  G  S  L  S  M  T  S  R  Y  Q  *  C  Q  *  K  R  W  K  I  S  K  K  S  Q  F  Q  H  Q  Q  H  Y  L  L  *  K  L  P  K  P  M  H  F  R  W  H  R  L  L  L  L  S  Y  F  Q  Y  R  L  I  S  Q  E  R  I  Q  L  C  F  D  M  I  M  R  I  H  R  C  *  L  V  L  F  L  C  F  Q  C  L  I  H  Q  N  R  S  T  L  T  P  T  T  I  Q  Q  S  S  H  R  R  C  H  *  D  Y  H  C  H  L  I  R  D  K  H  H  L  L  D  T  R  H  I  M  *  C  Q  V  S  V  M  E  K  A  S  S  V  W  H  E  R  D  Q  R  I  S  G  E  R  K  K  R  R  R  K  N  *  D  K  E  *  V  S  W  V  H  N  Y  I  N  L  I  Y  *  G  K  V  Y  V  R  R  Y  P  Y  V  I  N  *  L  D  F  W  S  *  F  V  Q  T  R  N  M  S  C  F  V  V  P  I  *  C  Y  S  Y  L  *  H  Q  N  P  Y  Y  *  S  S  F  P  W  K  N  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71773" stop="71467"/>
                    <exon start="71030" stop="70762"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>573</number_coding_nucleotides>
                  <number_encoded_amino_acids>191</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FVESSRKMSSVCSDKSSSTPAVTGGGFGGEIMLFGVRVKVDPMRKSVSLNDLSQYEQPNANNNNNNGGGDNNESSKVAQDEGYASADDAVQHQSNSGRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDSVFIFYSCLPFIKLVSHPYY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70429" stop="69944"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>483</number_coding_nucleotides>
                  <number_encoded_amino_acids>161</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IQTATWIFCFSDFPFLRFSFYDKQVSVMPIEEVENKQEIPVPAPATLPPVETTKTNAFSVAPAVAPIIFPVQVNKSRENPTLFRHDHANSSMLVGPVPMFSMPNPSKSIDLNANHNSTIEPSSLSLRLSLSLDQGQASSTRHSAYNVMSSFSNGESIIRVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="82035" PGL_stop="75930"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82035" e_stop="81888"/>
            <exon e_start="80456" e_stop="80333"/>
            <exon e_start="80209" e_stop="80128"/>
            <exon e_start="80055" e_stop="79967"/>
            <exon e_start="79885" e_stop="79811"/>
            <exon e_start="79719" e_stop="79665"/>
            <exon e_start="79244" e_stop="79125"/>
            <exon e_start="79040" e_stop="78948"/>
            <exon e_start="78877" e_stop="78732"/>
            <exon e_start="76869" e_stop="76692"/>
            <exon e_start="76585" e_stop="75930"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.915" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.948" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.997" e_score="0.989"/>
          <exon-intron don_prob="0.830" acc_prob="0.970" e_score="1.000"/>
          <exon-intron don_prob="0.377" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.866" acc_prob="0.199" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.156" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.971" e_score="0.911"/>
          <exon-intron don_prob="0.931" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="82035" e_stop="81888" e_length="148"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.915">
            <gDNA_intron_boundary i_start="81887" i_stop="80457" i_length="1431"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="80456" e_stop="80333" e_length="124"/>
          </exon>
          <intron i_serial="2" don_prob="0.975" acc_prob="0.999">
            <gDNA_intron_boundary i_start="80332" i_stop="80210" i_length="123"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="80209" e_stop="80128" e_length="82"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.948">
            <gDNA_intron_boundary i_start="80127" i_stop="80056" i_length="72"/>
          </intron>
          <exon e_serial="4" e_score="0.989">
            <gDNA_exon_boundary e_start="80055" e_stop="79967" e_length="89"/>
          </exon>
          <intron i_serial="4" don_prob="0.982" acc_prob="0.997">
            <gDNA_intron_boundary i_start="79966" i_stop="79886" i_length="81"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="79885" e_stop="79811" e_length="75"/>
          </exon>
          <intron i_serial="5" don_prob="0.830" acc_prob="0.970">
            <gDNA_intron_boundary i_start="79810" i_stop="79720" i_length="91"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="79719" e_stop="79665" e_length="55"/>
          </exon>
          <intron i_serial="6" don_prob="0.377" acc_prob="0.994">
            <gDNA_intron_boundary i_start="79664" i_stop="79245" i_length="420"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="79244" e_stop="79125" e_length="120"/>
          </exon>
          <intron i_serial="7" don_prob="0.866" acc_prob="0.199">
            <gDNA_intron_boundary i_start="79124" i_stop="79041" i_length="84"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="79040" e_stop="78948" e_length="93"/>
          </exon>
          <intron i_serial="8" don_prob="0.992" acc_prob="0.156">
            <gDNA_intron_boundary i_start="78947" i_stop="78878" i_length="70"/>
          </intron>
          <exon e_serial="9" e_score="0.911">
            <gDNA_exon_boundary e_start="78877" e_stop="78732" e_length="146"/>
          </exon>
          <intron i_serial="9" don_prob="1.000" acc_prob="0.971">
            <gDNA_intron_boundary i_start="78731" i_stop="76870" i_length="1862"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="76869" e_stop="76692" e_length="178"/>
          </exon>
          <intron i_serial="10" don_prob="0.931" acc_prob="0.998">
            <gDNA_intron_boundary i_start="76691" i_stop="76586" i_length="106"/>
          </intron>
          <exon e_serial="11" e_score="0.991">
            <gDNA_exon_boundary e_start="76585" e_stop="75930" e_length="656"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82035" stop="81888"/>
              <exon start="80456" stop="80333"/>
              <exon start="80209" stop="80128"/>
              <exon start="80055" stop="79967"/>
              <exon start="79885" stop="79811"/>
              <exon start="79719" stop="79665"/>
              <exon start="79244" stop="79125"/>
              <exon start="79040" stop="78948"/>
              <exon start="78877" stop="78782"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709724" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79196" stop="79125"/>
              <exon start="79040" stop="78948"/>
              <exon start="78877" stop="78732"/>
              <exon start="76869" stop="76823"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259070" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78827" stop="78732"/>
              <exon start="76869" stop="76692"/>
              <exon start="76585" stop="76471"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568618" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78779" stop="78732"/>
              <exon start="76869" stop="76692"/>
              <exon start="76585" stop="75995"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E699682" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76789" stop="76692"/>
              <exon start="76585" stop="75930"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549724" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76789" stop="76692"/>
              <exon start="76585" stop="75969"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549746" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76788" stop="76692"/>
              <exon start="76585" stop="76178"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246157" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACAATCGGAGCGTATTCAAAGTGGCTTGATGCTTCATCAAATGGATTTTCACATTTGCCCACACTCATTGATATTCTTGTGAGAGGCATGAGCACGTGTGAAGATTCCGCAGCTGCAGCTGCTTTAGCTTTCAGACACATATGCAATG : ATTGCAAGAAGAAGCTTTGTGGGTCACTAGATGGTCTGTTTCAAATTTACCAAACGGCAGTCATTGGGGAAGGTCCCTTCAAAGTTTCCGCGGAAGATTCGTTGCATCTGGTTGAAGCTTTAAG : TATGGTTATTACAGAGCTTCCTTCGGAACATGCTAAGAAGGCACTTGAGGCAGTATGCCTGCCATCTGTTGCTCAGTTACAA : GAGATGATCAATCAAGGTCCCCAAGTTTTGGGGCAAAAAAATGCTCGGGAATTAACTGTTCATTTTGATCGACTTGCAAATATATTTAG : ATATGTAAATCACCCAGAAGCGGTTGCAGATGCAATTCAAAAACTTTGGCCAATATTCAAAGCCATTTTTGATGT : TCGTGCTTGGGACATGCGGACGATGGAGTCTCTTTGCCGGGCTTGTAAAAATGCT : GTACGAACTTCTAAGAGGCTCATGGGGGTTACAATTGGGGCGATGCTGGAGGAAATACAAGGACTATATGGACAACACCATCAGCCGTGTTTTCTTTATCTCTCTAGTGAAGTCATTAAG : ATATTTGGTTCAGATCCATCCTGTGCAAATTACTTGAAAGTTCTCATTGAGTCTCTCTTTAGCCATACAGCATGTCTTCTTACAAAGATTCAG : GATTTCACTTCCCGTCCGGATATAGCAGATGATTGTTTTTTGCTGGCATCAAGATGTATCCGATACTGTCCTCAACTATTTTTTCCCTCTACTGTGTTTCCATCATTGGTGGATTGTGCCATGATCGGCATCACCGTGCAGCACAG : GGAGGCTTGCAATTCAATATTGAACTTTGTGTCTGATATATTCGATCTTTCGAACTCTACAAACGGGGAAAGTTGCCTATCCATAAGAGACAGTGTAATTATTCCTCGAGGGCCCACTATCACCAGAATTTTGGTTGCTTGTCTAACTGGAGCCCTTCCTAGTTCACGACTAGAAACA : GTAACTTACGCTCTACTGGCATTGACCCGGGCATATGGGTTGAAAGCTCTTGAGTGGGCAAAGGAATGTGTGTCCTTAATTCCATCAACAGCTGTTACAGAATTGGAAAGGACTAGGTTTTTACAAGCTTTGTCTGATGCAGCCTCTGGAGCAAATATGAACGGTCTGGTAGTTCCGATTGACGAGATTTCAGAGGTTTGCCGACGTAATCGAACTGTTCAGGAAATAGTTCAAGGAGCTTTGAGGCCACTTGATCTGAACATAGTAGCTGTATCATAGTGGAGAGGGTGCAGAAGGACCTTTTTTTAACCTCTCCCTTCTTTGCAGACAGTAGTTTTTCATGATTCTTTGGAGGCCTTATTTCATCGTTTGTCCATTGTGCGGCTTGGAAATATATACTAGTTATGCAGCAAAAGGGTGTTGTATTGTTGTTACTTTTTCTACTTGTGGGAAGTGATAGAGGAACTCAAAGCAGATGCAGTTCACTTGGTTTGGCTTTTTCACTTTTGGTCCTTTTTCGATTTGGGGGGGTTTTCTTTCGAAGGTGAGGAGTTTCCAGTTTTGAGGTTTAATCCTGGAGTTCAATGTATAAGCTTCTTGTATTTGGTAACATCTTCCAGTTTATAACTATGTATAGAATGTGCAGTTTCTTTCAG</gDNA_template>
            <first_frame> T  I  G  A  Y  S  K  W  L  D  A  S  S  N  G  F  S  H  L  P  T  L  I  D  I  L  V  R  G  M  S  T  C  E  D  S  A  A  A  A  A  L  A  F  R  H  I  C  N   : D  C  K  K  K  L  C  G  S  L  D  G  L  F  Q  I  Y  Q  T  A  V  I  G  E  G  P  F  K  V  S  A  E  D  S  L  H  L  V  E  A  L  S :   M  V  I  T  E  L  P  S  E  H  A  K  K  A  L  E  A  V  C  L  P  S  V  A  Q  L  Q  :  E  M  I  N  Q  G  P  Q  V  L  G  Q  K  N  A  R  E  L  T  V  H  F  D  R  L  A  N  I  F  R :   Y  V  N  H  P  E  A  V  A  D  A  I  Q  K  L  W  P  I  F  K  A  I  F  D  V :   R  A  W  D  M  R  T  M  E  S  L  C  R  A  C  K  N  A  :  V  R  T  S  K  R  L  M  G  V  T  I  G  A  M  L  E  E  I  Q  G  L  Y  G  Q  H  H  Q  P  C  F  L  Y  L  S  S  E  V  I  K  :  I  F  G  S  D  P  S  C  A  N  Y  L  K  V  L  I  E  S  L  F  S  H  T  A  C  L  L  T  K  I  Q  :  D  F  T  S  R  P  D  I  A  D  D  C  F  L  L  A  S  R  C  I  R  Y  C  P  Q  L  F  F  P  S  T  V  F  P  S  L  V  D  C  A  M  I  G  I  T  V  Q  H  R :   E  A  C  N  S  I  L  N  F  V  S  D  I  F  D  L  S  N  S  T  N  G  E  S  C  L  S  I  R  D  S  V  I  I  P  R  G  P  T  I  T  R  I  L  V  A  C  L  T  G  A  L  P  S  S  R  L  E  T  :  V  T  Y  A  L  L  A  L  T  R  A  Y  G  L  K  A  L  E  W  A  K  E  C  V  S  L  I  P  S  T  A  V  T  E  L  E  R  T  R  F  L  Q  A  L  S  D  A  A  S  G  A  N  M  N  G  L  V  V  P  I  D  E  I  S  E  V  C  R  R  N  R  T  V  Q  E  I  V  Q  G  A  L  R  P  L  D  L  N  I  V  A  V  S  *  W  R  G  C  R  R  T  F  F  *  P  L  P  S  L  Q  T  V  V  F  H  D  S  L  E  A  L  F  H  R  L  S  I  V  R  L  G  N  I  Y  *  L  C  S  K  R  V  L  Y  C  C  Y  F  F  Y  L  W  E  V  I  E  E  L  K  A  D  A  V  H  L  V  W  L  F  H  F  W  S  F  F  D  L  G  G  F  S  F  E  G  E  E  F  P  V  L  R  F  N  P  G  V  Q  C  I  S  F  L  Y  L  V  T  S  S  S  L  *  L  C  I  E  C  A  V  S  F   </first_frame>
            <second_frame>  Q  S  E  R  I  Q  S  G  L  M  L  H  Q  M  D  F  H  I  C  P  H  S  L  I  F  L  *  E  A  *  A  R  V  K  I  P  Q  L  Q  L  L  *  L  S  D  T  Y  A  M  :  I  A  R  R  S  F  V  G  H  *  M  V  C  F  K  F  T  K  R  Q  S  L  G  K  V  P  S  K  F  P  R  K  I  R  C  I  W  L  K  L  *   : V  W  L  L  Q  S  F  L  R  N  M  L  R  R  H  L  R  Q  Y  A  C  H  L  L  L  S  Y  K :   R  *  S  I  K  V  P  K  F  W  G  K  K  M  L  G  N  *  L  F  I  L  I  D  L  Q  I  Y  L   : D  M  *  I  T  Q  K  R  L  Q  M  Q  F  K  N  F  G  Q  Y  S  K  P  F  L  M   : F  V  L  G  T  C  G  R  W  S  L  F  A  G  L  V  K  M  L :   Y  E  L  L  R  G  S  W  G  L  Q  L  G  R  C  W  R  K  Y  K  D  Y  M  D  N  T  I  S  R  V  F  F  I  S  L  V  K  S  L  R :   Y  L  V  Q  I  H  P  V  Q  I  T  *  K  F  S  L  S  L  S  L  A  I  Q  H  V  F  L  Q  R  F  R :   I  S  L  P  V  R  I  *  Q  M  I  V  F  C  W  H  Q  D  V  S  D  T  V  L  N  Y  F  F  P  L  L  C  F  H  H  W  W  I  V  P  *  S  A  S  P  C  S  T   : G  R  L  A  I  Q  Y  *  T  L  C  L  I  Y  S  I  F  R  T  L  Q  T  G  K  V  A  Y  P  *  E  T  V  *  L  F  L  E  G  P  L  S  P  E  F  W  L  L  V  *  L  E  P  F  L  V  H  D  *  K  Q :   *  L  T  L  Y  W  H  *  P  G  H  M  G  *  K  L  L  S  G  Q  R  N  V  C  P  *  F  H  Q  Q  L  L  Q  N  W  K  G  L  G  F  Y  K  L  C  L  M  Q  P  L  E  Q  I  *  T  V  W  *  F  R  L  T  R  F  Q  R  F  A  D  V  I  E  L  F  R  K  *  F  K  E  L  *  G  H  L  I  *  T  *  *  L  Y  H  S  G  E  G  A  E  G  P  F  F  N  L  S  L  L  C  R  Q  *  F  F  M  I  L  W  R  P  Y  F  I  V  C  P  L  C  G  L  E  I  Y  T  S  Y  A  A  K  G  C  C  I  V  V  T  F  S  T  C  G  K  *  *  R  N  S  K  Q  M  Q  F  T  W  F  G  F  F  T  F  G  P  F  S  I  W  G  G  F  L  S  K  V  R  S  F  Q  F  *  G  L  I  L  E  F  N  V  *  A  S  C  I  W  *  H  L  P  V  Y  N  Y  V  *  N  V  Q  F  L  S  </second_frame>
            <third_frame>   N  R  S  V  F  K  V  A  *  C  F  I  K  W  I  F  T  F  A  H  T  H  *  Y  S  C  E  R  H  E  H  V  *  R  F  R  S  C  S  C  F  S  F  Q  T  H  M  Q  * :   L  Q  E  E  A  L  W  V  T  R  W  S  V  S  N  L  P  N  G  S  H  W  G  R  S  L  Q  S  F  R  G  R  F  V  A  S  G  *  S  F  K  :  Y  G  Y  Y  R  A  S  F  G  T  C  *  E  G  T  *  G  S  M  P  A  I  C  C  S  V  T   : R  D  D  Q  S  R  S  P  S  F  G  A  K  K  C  S  G  I  N  C  S  F  *  S  T  C  K  Y  I  *  :  I  C  K  S  P  R  S  G  C  R  C  N  S  K  T  L  A  N  I  Q  S  H  F  *  C  :  S  C  L  G  H  A  D  D  G  V  S  L  P  G  L  *  K  C   : C  T  N  F  *  E  A  H  G  G  Y  N  W  G  D  A  G  G  N  T  R  T  I  W  T  T  P  S  A  V  F  S  L  S  L  *  *  S  H  *   : D  I  W  F  R  S  I  L  C  K  L  L  E  S  S  H  *  V  S  L  *  P  Y  S  M  S  S  Y  K  D  S   : G  F  H  F  P  S  G  Y  S  R  *  L  F  F  A  G  I  K  M  Y  P  I  L  S  S  T  I  F  S  L  Y  C  V  S  I  I  G  G  L  C  H  D  R  H  H  R  A  A  Q  :  G  G  L  Q  F  N  I  E  L  C  V  *  Y  I  R  S  F  E  L  Y  K  R  G  K  L  P  I  H  K  R  Q  C  N  Y  S  S  R  A  H  Y  H  Q  N  F  G  C  L  S  N  W  S  P  S  *  F  T  T  R  N   : S  N  L  R  S  T  G  I  D  P  G  I  W  V  E  S  S  *  V  G  K  G  M  C  V  L  N  S  I  N  S  C  Y  R  I  G  K  D  *  V  F  T  S  F  V  *  C  S  L  W  S  K  Y  E  R  S  G  S  S  D  *  R  D  F  R  G  L  P  T  *  S  N  C  S  G  N  S  S  R  S  F  E  A  T  *  S  E  H  S  S  C  I  I  V  E  R  V  Q  K  D  L  F  L  T  S  P  F  F  A  D  S  S  F  S  *  F  F  G  G  L  I  S  S  F  V  H  C  A  A  W  K  Y  I  L  V  M  Q  Q  K  G  V  V  L  L  L  L  F  L  L  V  G  S  D  R  G  T  Q  S  R  C  S  S  L  G  L  A  F  S  L  L  V  L  F  R  F  G  G  V  F  F  R  R  *  G  V  S  S  F  E  V  *  S  W  S  S  M  Y  K  L  L  V  F  G  N  I  F  Q  F  I  T  M  Y  R  M  C  S  F  F  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82035" stop="81888"/>
                    <exon start="80456" stop="80333"/>
                    <exon start="80209" stop="80128"/>
                    <exon start="80055" stop="79967"/>
                    <exon start="79885" stop="79811"/>
                    <exon start="79719" stop="79665"/>
                    <exon start="79244" stop="79125"/>
                    <exon start="79040" stop="78948"/>
                    <exon start="78877" stop="78732"/>
                    <exon start="76869" stop="76692"/>
                    <exon start="76585" stop="76307"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1386</number_coding_nucleotides>
                  <number_encoded_amino_acids>462</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TIGAYSKWLDASSNGFSHLPTLIDILVRGMSTCEDSAAAAALAFRHICNDCKKKLCGSLDGLFQIYQTAVIGEGPFKVSAEDSLHLVEALSMVITELPSEHAKKALEAVCLPSVAQLQEMINQGPQVLGQKNARELTVHFDRLANIFRYVNHPEAVADAIQKLWPIFKAIFDVRAWDMRTMESLCRACKNAVRTSKRLMGVTIGAMLEEIQGLYGQHHQPCFLYLSSEVIKIFGSDPSCANYLKVLIESLFSHTACLLTKIQDFTSRPDIADDCFLLASRCIRYCPQLFFPSTVFPSLVDCAMIGITVQHREACNSILNFVSDIFDLSNSTNGESCLSIRDSVIIPRGPTITRILVACLTGALPSSRLETVTYALLALTRAYGLKALEWAKECVSLIPSTAVTELERTRFLQALSDAASGANMNGLVVPIDEISEVCRRNRTVQEIVQGALRPLDLNIVAVS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76183" stop="75959"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LCSKRVLYCCYFFYLWEVIEELKADAVHLVWLFHFWSFFDLGGFSFEGEEFPVLRFNPGVQCISFLYLVTSSSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="94568" PGL_stop="104426"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="94660" e_stop="95095"/>
            <exon e_start="100537" e_stop="100644"/>
            <exon e_start="100781" e_stop="101056"/>
            <exon e_start="103900" e_stop="104410"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.934" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="94660" e_stop="95095" e_length="436"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="95096" i_stop="100536" i_length="5441"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="100537" e_stop="100644" e_length="108"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="100781" e_stop="101056" e_length="276"/>
          </exon>
          <intron i_serial="3" don_prob="0.934" acc_prob="0.992">
            <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843"/>
          </intron>
          <exon e_serial="4" e_score="0.998">
            <gDNA_exon_boundary e_start="103900" e_stop="104410" e_length="511"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94660" stop="95095"/>
              <exon start="100537" stop="100576"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94663" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101033"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717624" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94676" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="100991"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572351" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94676" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="100790"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725846" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94677" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="103967"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705492" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94677" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101012"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E554092" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94678" stop="95095"/>
              <exon start="100537" stop="100611"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204426" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94682" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104020"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702236" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94683" stop="95094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259950" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94684" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="100881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376546" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94684" stop="95067"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94698" stop="95095"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301583" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94709" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101027"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697818" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94795" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="103918"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731222" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94840" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104127"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706515" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94876" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="100918"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329231" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95019" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104045"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276937" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95047" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104014"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295291" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95049" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="103976"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245676" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100556" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301597" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100560" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100566" stop="100644"/>
              <exon start="100781" stop="101053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274199" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100571" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369042" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100571" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="103932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248974" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100618" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104097"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267227" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100914" stop="101056"/>
              <exon start="103900" stop="104410"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369041" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101034" stop="101056"/>
              <exon start="103900" stop="104372"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350169" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101034" stop="101056"/>
              <exon start="103900" stop="104372"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350908" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101034" stop="101056"/>
              <exon start="103900" stop="104198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351777" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGAATTGAAAGGGCAAATTGGGCGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAG : ACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG : ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTG : GTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTTAAGTCTGGTGCCTTCTAGTTGGAAGTATAGTATTTCCGTTAATCTGGCTGGGTGTGTGTCCATCCGATACTTGTGAAGTTTCCCATGGTCATGTTTTTAGTTCTTAAAAGATGTTAGAACTGAATATCCTATGTACATATATTATGCCATTTTGCTTTTAA</gDNA_template>
            <first_frame> *  N  *  K  G  K  L  G  E  N  G  G  T  I  T  V  Q  G  K  S  P  Q  S  T  *  N  S  T  A  M  A  S  A  N  P  Q  N  L  S  *  G  L  P  M  S  P  P  S  P  V  P  S  P  L  S  P  P  K  S  S  R  C  L  S  Y  H  R  H  R  F  K  P  *  P  *  P  Q  N  *  Y  Q  I  Q  T  *  G  *  G  S  C  F  D  S  S  E  D  R  E  G  G  R  G  C  S  S  G  E  C  E  R  A  G  E  I  G  *  F  I  C  C  R  G  *  T  *  A  *  G  F  G  K  R  S  E  I  G  G  S  G  E  S  L  W  C  G   : D  *  Q  Q  R  G  C  N  *  *  S  E  K  K  G  D  *  G  *  I  T  S  S  E  Y  E  K  A  W  F  G  T  I  T  K  T   : D  F  E  C  R  R  G  A  E  E  T  K  H  A  R  N  G  S  A  A  I  T  P  T  S  S  G  Y  N  K  R  H  W  I  Y  N  *  T  K  H  T  *  N  G  L  G  W  *  P  H  R  *  G  G  W  R  W  R  *  *  C  I  Q  P  E  H  T  S  S  E  F  A  S  F  E  Q  Y  I  T  I  F  R  F  S  T  E  E  D  P  L  *  C   : G  S  S  R  F  T  I  C  W  S  Y  C  *  S  F  T  V  C  T  S  G  T  A  R  A  T  F  K  S  P  P  S  V  L  I  W  N  E  H  C  C  L  L  S  F  S  C  S  I  R  R  H  F  S  I  S  R  S  V  C  K  P  M  K  M  G  V  V  L  V  V  T  P  P  V  S  W  L  S  V  L  S  T  S  F  *  V  S  T  G  *  S  M  K  L  *  I  I  L  *  F  Q  I  G  H  S  L  *  R  *  Q  *  R  C  S  V  F  K  S  G  A  F  *  L  E  V  *  Y  F  R  *  S  G  W  V  C  V  H  P  I  L  V  K  F  P  M  V  M  F  L  V  L  K  R  C  *  N  *  I  S  Y  V  H  I  L  C  H  F  A  F   </first_frame>
            <second_frame>  R  I  E  R  A  N  W  A  K  M  V  A  L  S  L  Y  K  G  N  L  H  R  V  P  E  T  P  R  R  W  L  V  P  T  P  K  I  S  H  K  D  F  Q  C  L  L  R  R  R  S  R  A  L  S  R  L  Q  N  P  P  D  V  S  P  T  T  A  T  A  S  N  P  N  P  N  L  K  T  D  T  K  S  K  P  E  D  E  V  P  V  S  I  P  V  K  I  E  K  E  E  E  D  V  R  V  E  N  V  K  E  P  E  K  L  V  D  S  S  A  V  V  V  E  P  K  L  E  V  L  E  N  D  Q  K  L  E  G  Q  V  N  P  S  G  V  E  :  T  S  N  K  E  D  A  T  D  N  Q  K  R  K  E  I  E  D  K  L  Q  V  L  N  M  K  K  H  G  L  V  Q  L  L  K  Q  :  I  L  N  A  E  E  E  L  K  R  R  S  M  Q  G  M  A  V  R  P  S  P  P  L  Q  V  D  T  T  N  D  T  G  S  I  T  K  L  N  T  P  R  M  G  L  D  G  N  P  I  G  E  V  D  G  D  G  G  D  D  A  S  N  Q  N  T  L  P  R  N  L  L  R  L  S  S  T  S  P  S  S  D  S  Q  L  R  K  T  P  Y  N  V  :  V  P  L  A  S  R  S  V  G  V  T  V  S  P  S  R  F  A  P  P  G  Q  Q  G  Q  P  S  S  L  P  P  V  S  L  S  G  T  N  I  V  A  S  S  P  S  P  V  A  S  G  G  T  S  A  F  R  D  R  F  A  S  P  *  K  W  E  L  C  *  L  L  L  L  L  S  A  G  F  L  F  S  Q  P  H  S  K  F  Q  L  A  N  L  *  S  C  K  L  F  C  S  S  K  L  V  I  R  C  N  G  S  S  D  D  A  V  S  L  S  L  V  P  S  S  W  K  Y  S  I  S  V  N  L  A  G  C  V  S  I  R  Y  L  *  S  F  P  W  S  C  F  *  F  L  K  D  V  R  T  E  Y  P  M  Y  I  Y  Y  A  I  L  L  L  </second_frame>
            <third_frame>   E  L  K  G  Q  I  G  R  K  W  W  H  Y  H  C  T  R  E  I  S  T  E  Y  L  K  L  H  G  D  G  *  C  Q  P  P  K  S  L  I  R  T  S  N  V  S  S  V  A  G  P  E  P  S  L  A  S  K  I  L  P  M  S  L  L  P  P  P  P  L  Q  T  L  T  L  T  S  K  L  I  P  N  P  N  L  R  M  R  F  L  F  R  F  Q  *  R  S  R  R  R  K  R  M  F  E  W  R  M  *  K  S  R  R  N  W  L  I  H  L  L  S  W  L  N  L  S  L  R  F  W  K  T  I  R  N  W  R  V  R  *  I  P  L  V  W  R :   L  A  T  K  R  M  Q  L  I  I  R  K  E  R  R  L  R  I  N  Y  K  F  *  I  *  K  S  M  V  W  Y  N  Y  *  N  R :   F  *  M  Q  K  R  S  *  R  D  E  A  C  K  E  W  Q  C  G  H  H  P  H  F  K  W  I  Q  Q  T  T  L  D  L  *  L  N  *  T  H  L  E  W  A  W  M  V  T  P  S  V  R  W  M  E  M  E  V  M  M  H  P  T  R  T  H  F  L  G  I  C  F  V  *  A  V  H  H  H  L  Q  I  L  N  *  G  R  P  P  I  M  W :   F  L  S  L  H  D  L  L  E  L  L  L  V  L  H  G  L  H  L  R  D  S  K  G  N  L  Q  V  S  P  Q  C  P  Y  L  E  R  T  L  L  P  P  L  L  L  L  *  H  Q  A  A  L  Q  H  F  E  I  G  L  Q  A  H  E  N  G  S  C  A  S  C  Y  S  S  C  Q  L  A  F  C  S  L  N  L  I  L  S  F  N  W  L  I  Y  E  A  V  N  Y  S  V  V  P  N  W  S  F  A  V  T  V  A  V  T  M  Q  C  L  *  V  W  C  L  L  V  G  S  I  V  F  P  L  I  W  L  G  V  C  P  S  D  T  C  E  V  S  H  G  H  V  F  S  S  *  K  M  L  E  L  N  I  L  C  T  Y  I  M  P  F  C  F  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94661" stop="95095"/>
                    <exon start="100537" stop="100644"/>
                    <exon start="100781" stop="101056"/>
                    <exon start="103900" stop="104088"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1005</number_coding_nucleotides>
                  <number_encoded_amino_acids>335</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RIERANWAKMVALSLYKGNLHRVPETPRRWLVPTPKISHKDFQCLLRRRSRALSRLQNPPDVSPTTATASNPNPNLKTDTKSKPEDEVPVSIPVKIEKEEEDVRVENVKEPEKLVDSSAVVVEPKLEVLENDQKLEGQVNPSGVETSNKEDATDNQKRKEIEDKLQVLNMKKHGLVQLLKQILNAEEELKRRSMQGMAVRPSPPLQVDTTNDTGSITKLNTPRMGLDGNPIGEVDGDGGDDASNQNTLPRNLLRLSSTSPSSDSQLRKTPYNVVPLASRSVGVTVSPSRFAPPGQQGQPSSLPPVSLSGTNIVASSPSPVASGGTSAFRDRFASP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="94568" e_stop="94570"/>
            <exon e_start="94663" e_stop="95095"/>
            <exon e_start="100537" e_stop="100644"/>
            <exon e_start="100781" e_stop="101056"/>
            <exon e_start="103900" e_stop="104410"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.900" acc_prob="0.358" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.934" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="94568" e_stop="94570" e_length="3"/>
          </exon>
          <intron i_serial="1" don_prob="0.900" acc_prob="0.358">
            <gDNA_intron_boundary i_start="94571" i_stop="94662" i_length="92"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="94663" e_stop="95095" e_length="433"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="95096" i_stop="100536" i_length="5441"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="100537" e_stop="100644" e_length="108"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="100781" e_stop="101056" e_length="276"/>
          </exon>
          <intron i_serial="4" don_prob="0.934" acc_prob="0.992">
            <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843"/>
          </intron>
          <exon e_serial="5" e_score="0.998">
            <gDNA_exon_boundary e_start="103900" e_stop="104410" e_length="511"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94568" stop="94570"/>
              <exon start="94663" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104372"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745440" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94663" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101033"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717624" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94676" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="100991"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572351" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94676" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="100790"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725846" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94677" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="103967"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705492" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94677" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101012"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E554092" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94678" stop="95095"/>
              <exon start="100537" stop="100611"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204426" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94682" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104020"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702236" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94683" stop="95094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259950" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94684" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="100881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376546" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94684" stop="95067"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94698" stop="95095"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301583" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94709" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101027"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697818" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94795" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="103918"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731222" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94840" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104127"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706515" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94876" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="100918"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329231" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95019" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104045"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276937" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95047" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104014"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295291" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95049" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="103976"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245676" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100556" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301597" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100560" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100566" stop="100644"/>
              <exon start="100781" stop="101053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274199" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100571" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369042" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100571" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="103932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248974" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100618" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104097"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267227" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100914" stop="101056"/>
              <exon start="103900" stop="104410"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369041" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101034" stop="101056"/>
              <exon start="103900" stop="104372"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350169" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101034" stop="101056"/>
              <exon start="103900" stop="104372"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350908" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101034" stop="101056"/>
              <exon start="103900" stop="104198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351777" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAG : AATTGAAAGGGCAAATTGGGCGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAG : ACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG : ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTG : GTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTTAAGTCTGGTGCCTTCTAGTTGGAAGTATAGTATTTCCGTTAATCTGGCTGGGTGTGTGTCCATCCGATACTTGTGAAGTTTCCCATGGTCATGTTTTTAGTTCTTAAAAGATGTTAGAACTGAATATCCTATGTACATATATTATGCCATTTTGCTTTTAA</gDNA_template>
            <first_frame> E  :  N  *  K  G  K  L  G  E  N  G  G  T  I  T  V  Q  G  K  S  P  Q  S  T  *  N  S  T  A  M  A  S  A  N  P  Q  N  L  S  *  G  L  P  M  S  P  P  S  P  V  P  S  P  L  S  P  P  K  S  S  R  C  L  S  Y  H  R  H  R  F  K  P  *  P  *  P  Q  N  *  Y  Q  I  Q  T  *  G  *  G  S  C  F  D  S  S  E  D  R  E  G  G  R  G  C  S  S  G  E  C  E  R  A  G  E  I  G  *  F  I  C  C  R  G  *  T  *  A  *  G  F  G  K  R  S  E  I  G  G  S  G  E  S  L  W  C  G   : D  *  Q  Q  R  G  C  N  *  *  S  E  K  K  G  D  *  G  *  I  T  S  S  E  Y  E  K  A  W  F  G  T  I  T  K  T   : D  F  E  C  R  R  G  A  E  E  T  K  H  A  R  N  G  S  A  A  I  T  P  T  S  S  G  Y  N  K  R  H  W  I  Y  N  *  T  K  H  T  *  N  G  L  G  W  *  P  H  R  *  G  G  W  R  W  R  *  *  C  I  Q  P  E  H  T  S  S  E  F  A  S  F  E  Q  Y  I  T  I  F  R  F  S  T  E  E  D  P  L  *  C   : G  S  S  R  F  T  I  C  W  S  Y  C  *  S  F  T  V  C  T  S  G  T  A  R  A  T  F  K  S  P  P  S  V  L  I  W  N  E  H  C  C  L  L  S  F  S  C  S  I  R  R  H  F  S  I  S  R  S  V  C  K  P  M  K  M  G  V  V  L  V  V  T  P  P  V  S  W  L  S  V  L  S  T  S  F  *  V  S  T  G  *  S  M  K  L  *  I  I  L  *  F  Q  I  G  H  S  L  *  R  *  Q  *  R  C  S  V  F  K  S  G  A  F  *  L  E  V  *  Y  F  R  *  S  G  W  V  C  V  H  P  I  L  V  K  F  P  M  V  M  F  L  V  L  K  R  C  *  N  *  I  S  Y  V  H  I  L  C  H  F  A  F   </first_frame>
            <second_frame>  R :   I  E  R  A  N  W  A  K  M  V  A  L  S  L  Y  K  G  N  L  H  R  V  P  E  T  P  R  R  W  L  V  P  T  P  K  I  S  H  K  D  F  Q  C  L  L  R  R  R  S  R  A  L  S  R  L  Q  N  P  P  D  V  S  P  T  T  A  T  A  S  N  P  N  P  N  L  K  T  D  T  K  S  K  P  E  D  E  V  P  V  S  I  P  V  K  I  E  K  E  E  E  D  V  R  V  E  N  V  K  E  P  E  K  L  V  D  S  S  A  V  V  V  E  P  K  L  E  V  L  E  N  D  Q  K  L  E  G  Q  V  N  P  S  G  V  E  :  T  S  N  K  E  D  A  T  D  N  Q  K  R  K  E  I  E  D  K  L  Q  V  L  N  M  K  K  H  G  L  V  Q  L  L  K  Q  :  I  L  N  A  E  E  E  L  K  R  R  S  M  Q  G  M  A  V  R  P  S  P  P  L  Q  V  D  T  T  N  D  T  G  S  I  T  K  L  N  T  P  R  M  G  L  D  G  N  P  I  G  E  V  D  G  D  G  G  D  D  A  S  N  Q  N  T  L  P  R  N  L  L  R  L  S  S  T  S  P  S  S  D  S  Q  L  R  K  T  P  Y  N  V  :  V  P  L  A  S  R  S  V  G  V  T  V  S  P  S  R  F  A  P  P  G  Q  Q  G  Q  P  S  S  L  P  P  V  S  L  S  G  T  N  I  V  A  S  S  P  S  P  V  A  S  G  G  T  S  A  F  R  D  R  F  A  S  P  *  K  W  E  L  C  *  L  L  L  L  L  S  A  G  F  L  F  S  Q  P  H  S  K  F  Q  L  A  N  L  *  S  C  K  L  F  C  S  S  K  L  V  I  R  C  N  G  S  S  D  D  A  V  S  L  S  L  V  P  S  S  W  K  Y  S  I  S  V  N  L  A  G  C  V  S  I  R  Y  L  *  S  F  P  W  S  C  F  *  F  L  K  D  V  R  T  E  Y  P  M  Y  I  Y  Y  A  I  L  L  L  </second_frame>
            <third_frame>    : E  L  K  G  Q  I  G  R  K  W  W  H  Y  H  C  T  R  E  I  S  T  E  Y  L  K  L  H  G  D  G  *  C  Q  P  P  K  S  L  I  R  T  S  N  V  S  S  V  A  G  P  E  P  S  L  A  S  K  I  L  P  M  S  L  L  P  P  P  P  L  Q  T  L  T  L  T  S  K  L  I  P  N  P  N  L  R  M  R  F  L  F  R  F  Q  *  R  S  R  R  R  K  R  M  F  E  W  R  M  *  K  S  R  R  N  W  L  I  H  L  L  S  W  L  N  L  S  L  R  F  W  K  T  I  R  N  W  R  V  R  *  I  P  L  V  W  R :   L  A  T  K  R  M  Q  L  I  I  R  K  E  R  R  L  R  I  N  Y  K  F  *  I  *  K  S  M  V  W  Y  N  Y  *  N  R :   F  *  M  Q  K  R  S  *  R  D  E  A  C  K  E  W  Q  C  G  H  H  P  H  F  K  W  I  Q  Q  T  T  L  D  L  *  L  N  *  T  H  L  E  W  A  W  M  V  T  P  S  V  R  W  M  E  M  E  V  M  M  H  P  T  R  T  H  F  L  G  I  C  F  V  *  A  V  H  H  H  L  Q  I  L  N  *  G  R  P  P  I  M  W :   F  L  S  L  H  D  L  L  E  L  L  L  V  L  H  G  L  H  L  R  D  S  K  G  N  L  Q  V  S  P  Q  C  P  Y  L  E  R  T  L  L  P  P  L  L  L  L  *  H  Q  A  A  L  Q  H  F  E  I  G  L  Q  A  H  E  N  G  S  C  A  S  C  Y  S  S  C  Q  L  A  F  C  S  L  N  L  I  L  S  F  N  W  L  I  Y  E  A  V  N  Y  S  V  V  P  N  W  S  F  A  V  T  V  A  V  T  M  Q  C  L  *  V  W  C  L  L  V  G  S  I  V  F  P  L  I  W  L  G  V  C  P  S  D  T  C  E  V  S  H  G  H  V  F  S  S  *  K  M  L  E  L  N  I  L  C  T  Y  I  M  P  F  C  F  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94569" stop="94570"/>
                    <exon start="94663" stop="95095"/>
                    <exon start="100537" stop="100644"/>
                    <exon start="100781" stop="101056"/>
                    <exon start="103900" stop="104088"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1005</number_coding_nucleotides>
                  <number_encoded_amino_acids>335</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RIERANWAKMVALSLYKGNLHRVPETPRRWLVPTPKISHKDFQCLLRRRSRALSRLQNPPDVSPTTATASNPNPNLKTDTKSKPEDEVPVSIPVKIEKEEEDVRVENVKEPEKLVDSSAVVVEPKLEVLENDQKLEGQVNPSGVETSNKEDATDNQKRKEIEDKLQVLNMKKHGLVQLLKQILNAEEELKRRSMQGMAVRPSPPLQVDTTNDTGSITKLNTPRMGLDGNPIGEVDGDGGDDASNQNTLPRNLLRLSSTSPSSDSQLRKTPYNVVPLASRSVGVTVSPSRFAPPGQQGQPSSLPPVSLSGTNIVASSPSPVASGGTSAFRDRFASP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="94684" e_stop="95074"/>
            <exon e_start="100537" e_stop="100644"/>
            <exon e_start="100781" e_stop="101056"/>
            <exon e_start="103900" e_stop="104410"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.391" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.934" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="94684" e_stop="95074" e_length="391"/>
          </exon>
          <intron i_serial="1" don_prob="0.391" acc_prob="0.997">
            <gDNA_intron_boundary i_start="95075" i_stop="100536" i_length="5462"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="100537" e_stop="100644" e_length="108"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="100781" e_stop="101056" e_length="276"/>
          </exon>
          <intron i_serial="3" don_prob="0.934" acc_prob="0.992">
            <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843"/>
          </intron>
          <exon e_serial="4" e_score="0.998">
            <gDNA_exon_boundary e_start="103900" e_stop="104410" e_length="511"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94684" stop="95067"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94752" stop="95074"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101035"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379654" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94754" stop="95074"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="100914"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207913" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94887" stop="95074"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101036"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366712" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94891" stop="95074"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101023"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366714" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100556" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301597" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100560" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100566" stop="100644"/>
              <exon start="100781" stop="101053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274199" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100571" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369042" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100571" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="103932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248974" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100618" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104097"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267227" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100914" stop="101056"/>
              <exon start="103900" stop="104410"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369041" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101034" stop="101056"/>
              <exon start="103900" stop="104372"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350169" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101034" stop="101056"/>
              <exon start="103900" stop="104372"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350908" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101034" stop="101056"/>
              <exon start="103900" stop="104198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351777" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAG : ACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG : ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTG : GTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTTAAGTCTGGTGCCTTCTAGTTGGAAGTATAGTATTTCCGTTAATCTGGCTGGGTGTGTGTCCATCCGATACTTGTGAAGTTTCCCATGGTCATGTTTTTAGTTCTTAAAAGATGTTAGAACTGAATATCCTATGTACATATATTATGCCATTTTGCTTTTAA</gDNA_template>
            <first_frame> E  N  G  G  T  I  T  V  Q  G  K  S  P  Q  S  T  *  N  S  T  A  M  A  S  A  N  P  Q  N  L  S  *  G  L  P  M  S  P  P  S  P  V  P  S  P  L  S  P  P  K  S  S  R  C  L  S  Y  H  R  H  R  F  K  P  *  P  *  P  Q  N  *  Y  Q  I  Q  T  *  G  *  G  S  C  F  D  S  S  E  D  R  E  G  G  R  G  C  S  S  G  E  C  E  R  A  G  E  I  G  *  F  I  C  C  R  G  *  T  *  A  *  G  F  G  K  R  S  E  I  G  G  S   : D  *  Q  Q  R  G  C  N  *  *  S  E  K  K  G  D  *  G  *  I  T  S  S  E  Y  E  K  A  W  F  G  T  I  T  K  T   : D  F  E  C  R  R  G  A  E  E  T  K  H  A  R  N  G  S  A  A  I  T  P  T  S  S  G  Y  N  K  R  H  W  I  Y  N  *  T  K  H  T  *  N  G  L  G  W  *  P  H  R  *  G  G  W  R  W  R  *  *  C  I  Q  P  E  H  T  S  S  E  F  A  S  F  E  Q  Y  I  T  I  F  R  F  S  T  E  E  D  P  L  *  C   : G  S  S  R  F  T  I  C  W  S  Y  C  *  S  F  T  V  C  T  S  G  T  A  R  A  T  F  K  S  P  P  S  V  L  I  W  N  E  H  C  C  L  L  S  F  S  C  S  I  R  R  H  F  S  I  S  R  S  V  C  K  P  M  K  M  G  V  V  L  V  V  T  P  P  V  S  W  L  S  V  L  S  T  S  F  *  V  S  T  G  *  S  M  K  L  *  I  I  L  *  F  Q  I  G  H  S  L  *  R  *  Q  *  R  C  S  V  F  K  S  G  A  F  *  L  E  V  *  Y  F  R  *  S  G  W  V  C  V  H  P  I  L  V  K  F  P  M  V  M  F  L  V  L  K  R  C  *  N  *  I  S  Y  V  H  I  L  C  H  F  A  F   </first_frame>
            <second_frame>  K  M  V  A  L  S  L  Y  K  G  N  L  H  R  V  P  E  T  P  R  R  W  L  V  P  T  P  K  I  S  H  K  D  F  Q  C  L  L  R  R  R  S  R  A  L  S  R  L  Q  N  P  P  D  V  S  P  T  T  A  T  A  S  N  P  N  P  N  L  K  T  D  T  K  S  K  P  E  D  E  V  P  V  S  I  P  V  K  I  E  K  E  E  E  D  V  R  V  E  N  V  K  E  P  E  K  L  V  D  S  S  A  V  V  V  E  P  K  L  E  V  L  E  N  D  Q  K  L  E  G  Q  :  T  S  N  K  E  D  A  T  D  N  Q  K  R  K  E  I  E  D  K  L  Q  V  L  N  M  K  K  H  G  L  V  Q  L  L  K  Q  :  I  L  N  A  E  E  E  L  K  R  R  S  M  Q  G  M  A  V  R  P  S  P  P  L  Q  V  D  T  T  N  D  T  G  S  I  T  K  L  N  T  P  R  M  G  L  D  G  N  P  I  G  E  V  D  G  D  G  G  D  D  A  S  N  Q  N  T  L  P  R  N  L  L  R  L  S  S  T  S  P  S  S  D  S  Q  L  R  K  T  P  Y  N  V  :  V  P  L  A  S  R  S  V  G  V  T  V  S  P  S  R  F  A  P  P  G  Q  Q  G  Q  P  S  S  L  P  P  V  S  L  S  G  T  N  I  V  A  S  S  P  S  P  V  A  S  G  G  T  S  A  F  R  D  R  F  A  S  P  *  K  W  E  L  C  *  L  L  L  L  L  S  A  G  F  L  F  S  Q  P  H  S  K  F  Q  L  A  N  L  *  S  C  K  L  F  C  S  S  K  L  V  I  R  C  N  G  S  S  D  D  A  V  S  L  S  L  V  P  S  S  W  K  Y  S  I  S  V  N  L  A  G  C  V  S  I  R  Y  L  *  S  F  P  W  S  C  F  *  F  L  K  D  V  R  T  E  Y  P  M  Y  I  Y  Y  A  I  L  L  L  </second_frame>
            <third_frame>   K  W  W  H  Y  H  C  T  R  E  I  S  T  E  Y  L  K  L  H  G  D  G  *  C  Q  P  P  K  S  L  I  R  T  S  N  V  S  S  V  A  G  P  E  P  S  L  A  S  K  I  L  P  M  S  L  L  P  P  P  P  L  Q  T  L  T  L  T  S  K  L  I  P  N  P  N  L  R  M  R  F  L  F  R  F  Q  *  R  S  R  R  R  K  R  M  F  E  W  R  M  *  K  S  R  R  N  W  L  I  H  L  L  S  W  L  N  L  S  L  R  F  W  K  T  I  R  N  W  R  V  R :   L  A  T  K  R  M  Q  L  I  I  R  K  E  R  R  L  R  I  N  Y  K  F  *  I  *  K  S  M  V  W  Y  N  Y  *  N  R :   F  *  M  Q  K  R  S  *  R  D  E  A  C  K  E  W  Q  C  G  H  H  P  H  F  K  W  I  Q  Q  T  T  L  D  L  *  L  N  *  T  H  L  E  W  A  W  M  V  T  P  S  V  R  W  M  E  M  E  V  M  M  H  P  T  R  T  H  F  L  G  I  C  F  V  *  A  V  H  H  H  L  Q  I  L  N  *  G  R  P  P  I  M  W :   F  L  S  L  H  D  L  L  E  L  L  L  V  L  H  G  L  H  L  R  D  S  K  G  N  L  Q  V  S  P  Q  C  P  Y  L  E  R  T  L  L  P  P  L  L  L  L  *  H  Q  A  A  L  Q  H  F  E  I  G  L  Q  A  H  E  N  G  S  C  A  S  C  Y  S  S  C  Q  L  A  F  C  S  L  N  L  I  L  S  F  N  W  L  I  Y  E  A  V  N  Y  S  V  V  P  N  W  S  F  A  V  T  V  A  V  T  M  Q  C  L  *  V  W  C  L  L  V  G  S  I  V  F  P  L  I  W  L  G  V  C  P  S  D  T  C  E  V  S  H  G  H  V  F  S  S  *  K  M  L  E  L  N  I  L  C  T  Y  I  M  P  F  C  F  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94685" stop="95074"/>
                    <exon start="100537" stop="100644"/>
                    <exon start="100781" stop="101056"/>
                    <exon start="103900" stop="104088"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>960</number_coding_nucleotides>
                  <number_encoded_amino_acids>320</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KMVALSLYKGNLHRVPETPRRWLVPTPKISHKDFQCLLRRRSRALSRLQNPPDVSPTTATASNPNPNLKTDTKSKPEDEVPVSIPVKIEKEEEDVRVENVKEPEKLVDSSAVVVEPKLEVLENDQKLEGQTSNKEDATDNQKRKEIEDKLQVLNMKKHGLVQLLKQILNAEEELKRRSMQGMAVRPSPPLQVDTTNDTGSITKLNTPRMGLDGNPIGEVDGDGGDDASNQNTLPRNLLRLSSTSPSSDSQLRKTPYNVVPLASRSVGVTVSPSRFAPPGQQGQPSSLPPVSLSGTNIVASSPSPVASGGTSAFRDRFASP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="94660" e_stop="95095"/>
            <exon e_start="100537" e_stop="100644"/>
            <exon e_start="100781" e_stop="101024"/>
            <exon e_start="104060" e_stop="104172"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.973"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="94660" e_stop="95095" e_length="436"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="95096" i_stop="100536" i_length="5441"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="100537" e_stop="100644" e_length="108"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="100781" e_stop="101024" e_length="244"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="101025" i_stop="104059" i_length="3035"/>
          </intron>
          <exon e_serial="4" e_score="0.973">
            <gDNA_exon_boundary e_start="104060" e_stop="104172" e_length="113"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94660" stop="95095"/>
              <exon start="100537" stop="100576"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94676" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="100991"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572351" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94676" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="100790"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725846" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94677" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101012"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E554092" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94678" stop="95095"/>
              <exon start="100537" stop="100611"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204426" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94683" stop="95094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259950" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94684" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="100881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376546" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94684" stop="95067"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94698" stop="95095"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301583" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94854" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="101024"/>
              <exon start="104060" stop="104172"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730255" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94876" stop="95095"/>
              <exon start="100537" stop="100644"/>
              <exon start="100781" stop="100918"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329231" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGAATTGAAAGGGCAAATTGGGCGAAAATGGTGGCACTATCACTGTACAAGGGAAATCTCCACAGAGTACCTGAAACTCCACGGCGATGGCTAGTGCCAACCCCCAAAATCTCTCATAAGGACTTCCAATGTCTCCTCCGTCGCCGGTCCCGAGCCCTCTCTCGCCTCCAAAATCCTCCCGATGTCTCTCCTACCACCGCCACCGCTTCAAACCCTAACCCTAACCTCAAAACTGATACCAAATCCAAACCTGAGGATGAGGTTCCTGTTTCGATTCCAGTGAAGATCGAGAAGGAGGAAGAGGATGTTCGAGTGGAGAATGTGAAAGAGCCGGAGAAATTGGTTGATTCATCTGCTGTCGTGGTTGAACCTAAGCTTGAGGTTTTGGAAAACGATCAGAAATTGGAGGGTCAGGTGAATCCCTCTGGTGTGGAG : ACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG : ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAG : CATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAAT</gDNA_template>
            <first_frame> *  N  *  K  G  K  L  G  E  N  G  G  T  I  T  V  Q  G  K  S  P  Q  S  T  *  N  S  T  A  M  A  S  A  N  P  Q  N  L  S  *  G  L  P  M  S  P  P  S  P  V  P  S  P  L  S  P  P  K  S  S  R  C  L  S  Y  H  R  H  R  F  K  P  *  P  *  P  Q  N  *  Y  Q  I  Q  T  *  G  *  G  S  C  F  D  S  S  E  D  R  E  G  G  R  G  C  S  S  G  E  C  E  R  A  G  E  I  G  *  F  I  C  C  R  G  *  T  *  A  *  G  F  G  K  R  S  E  I  G  G  S  G  E  S  L  W  C  G   : D  *  Q  Q  R  G  C  N  *  *  S  E  K  K  G  D  *  G  *  I  T  S  S  E  Y  E  K  A  W  F  G  T  I  T  K  T   : D  F  E  C  R  R  G  A  E  E  T  K  H  A  R  N  G  S  A  A  I  T  P  T  S  S  G  Y  N  K  R  H  W  I  Y  N  *  T  K  H  T  *  N  G  L  G  W  *  P  H  R  *  G  G  W  R  W  R  *  *  C  I  Q  P  E  H  T  S  S  E  F  A  S  F  E  Q  Y  I  T  I  F  S :   I  S  R  S  V  C  K  P  M  K  M  G  V  V  L  V  V  T  P  P  V  S  W  L  S  V  L  S  T  S  F  *  V  S  T  G  *  </first_frame>
            <second_frame>  R  I  E  R  A  N  W  A  K  M  V  A  L  S  L  Y  K  G  N  L  H  R  V  P  E  T  P  R  R  W  L  V  P  T  P  K  I  S  H  K  D  F  Q  C  L  L  R  R  R  S  R  A  L  S  R  L  Q  N  P  P  D  V  S  P  T  T  A  T  A  S  N  P  N  P  N  L  K  T  D  T  K  S  K  P  E  D  E  V  P  V  S  I  P  V  K  I  E  K  E  E  E  D  V  R  V  E  N  V  K  E  P  E  K  L  V  D  S  S  A  V  V  V  E  P  K  L  E  V  L  E  N  D  Q  K  L  E  G  Q  V  N  P  S  G  V  E  :  T  S  N  K  E  D  A  T  D  N  Q  K  R  K  E  I  E  D  K  L  Q  V  L  N  M  K  K  H  G  L  V  Q  L  L  K  Q  :  I  L  N  A  E  E  E  L  K  R  R  S  M  Q  G  M  A  V  R  P  S  P  P  L  Q  V  D  T  T  N  D  T  G  S  I  T  K  L  N  T  P  R  M  G  L  D  G  N  P  I  G  E  V  D  G  D  G  G  D  D  A  S  N  Q  N  T  L  P  R  N  L  L  R  L  S  S  T  S  P  S  S   : A  F  R  D  R  F  A  S  P  *  K  W  E  L  C  *  L  L  L  L  L  S  A  G  F  L  F  S  Q  P  H  S  K  F  Q  L  A  N </second_frame>
            <third_frame>   E  L  K  G  Q  I  G  R  K  W  W  H  Y  H  C  T  R  E  I  S  T  E  Y  L  K  L  H  G  D  G  *  C  Q  P  P  K  S  L  I  R  T  S  N  V  S  S  V  A  G  P  E  P  S  L  A  S  K  I  L  P  M  S  L  L  P  P  P  P  L  Q  T  L  T  L  T  S  K  L  I  P  N  P  N  L  R  M  R  F  L  F  R  F  Q  *  R  S  R  R  R  K  R  M  F  E  W  R  M  *  K  S  R  R  N  W  L  I  H  L  L  S  W  L  N  L  S  L  R  F  W  K  T  I  R  N  W  R  V  R  *  I  P  L  V  W  R :   L  A  T  K  R  M  Q  L  I  I  R  K  E  R  R  L  R  I  N  Y  K  F  *  I  *  K  S  M  V  W  Y  N  Y  *  N  R :   F  *  M  Q  K  R  S  *  R  D  E  A  C  K  E  W  Q  C  G  H  H  P  H  F  K  W  I  Q  Q  T  T  L  D  L  *  L  N  *  T  H  L  E  W  A  W  M  V  T  P  S  V  R  W  M  E  M  E  V  M  M  H  P  T  R  T  H  F  L  G  I  C  F  V  *  A  V  H  H  H  L  Q  :  H  F  E  I  G  L  Q  A  H  E  N  G  S  C  A  S  C  Y  S  S  C  Q  L  A  F  C  S  L  N  L  I  L  S  F  N  W  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94661" stop="95095"/>
                    <exon start="100537" stop="100644"/>
                    <exon start="100781" stop="101024"/>
                    <exon start="104060" stop="104088"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>813</number_coding_nucleotides>
                  <number_encoded_amino_acids>271</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RIERANWAKMVALSLYKGNLHRVPETPRRWLVPTPKISHKDFQCLLRRRSRALSRLQNPPDVSPTTATASNPNPNLKTDTKSKPEDEVPVSIPVKIEKEEEDVRVENVKEPEKLVDSSAVVVEPKLEVLENDQKLEGQVNPSGVETSNKEDATDNQKRKEIEDKLQVLNMKKHGLVQLLKQILNAEEELKRRSMQGMAVRPSPPLQVDTTNDTGSITKLNTPRMGLDGNPIGEVDGDGGDDASNQNTLPRNLLRLSSTSPSSAFRDRFASP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="100536" e_stop="100644"/>
            <exon e_start="100781" e_stop="101056"/>
            <exon e_start="103900" e_stop="104410"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.934" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="100536" e_stop="100644" e_length="109"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="100645" i_stop="100780" i_length="136"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="100781" e_stop="101056" e_length="276"/>
          </exon>
          <intron i_serial="2" don_prob="0.934" acc_prob="0.992">
            <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843"/>
          </intron>
          <exon e_serial="3" e_score="0.998">
            <gDNA_exon_boundary e_start="103900" e_stop="104410" e_length="511"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100536" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104350"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705978" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100556" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301597" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100560" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100566" stop="100644"/>
              <exon start="100781" stop="101053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274199" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100571" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369042" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100571" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="103932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248974" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100618" stop="100644"/>
              <exon start="100781" stop="101056"/>
              <exon start="103900" stop="104097"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267227" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100914" stop="101056"/>
              <exon start="103900" stop="104410"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369041" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101034" stop="101056"/>
              <exon start="103900" stop="104372"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350169" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101034" stop="101056"/>
              <exon start="103900" stop="104372"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350908" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101034" stop="101056"/>
              <exon start="103900" stop="104198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351777" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="5" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GACTAGCAACAAAGAGGATGCAACTGATAATCAGAAAAGAAAGGAGATTGAGGATAAATTACAAGTTCTGAATATGAAAAAGCATGGTTTGGTACAATTACTAAAACAG : ATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTG : GTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTTAAGTCTGGTGCCTTCTAGTTGGAAGTATAGTATTTCCGTTAATCTGGCTGGGTGTGTGTCCATCCGATACTTGTGAAGTTTCCCATGGTCATGTTTTTAGTTCTTAAAAGATGTTAGAACTGAATATCCTATGTACATATATTATGCCATTTTGCTTTTAA</gDNA_template>
            <first_frame> D  *  Q  Q  R  G  C  N  *  *  S  E  K  K  G  D  *  G  *  I  T  S  S  E  Y  E  K  A  W  F  G  T  I  T  K  T   : D  F  E  C  R  R  G  A  E  E  T  K  H  A  R  N  G  S  A  A  I  T  P  T  S  S  G  Y  N  K  R  H  W  I  Y  N  *  T  K  H  T  *  N  G  L  G  W  *  P  H  R  *  G  G  W  R  W  R  *  *  C  I  Q  P  E  H  T  S  S  E  F  A  S  F  E  Q  Y  I  T  I  F  R  F  S  T  E  E  D  P  L  *  C   : G  S  S  R  F  T  I  C  W  S  Y  C  *  S  F  T  V  C  T  S  G  T  A  R  A  T  F  K  S  P  P  S  V  L  I  W  N  E  H  C  C  L  L  S  F  S  C  S  I  R  R  H  F  S  I  S  R  S  V  C  K  P  M  K  M  G  V  V  L  V  V  T  P  P  V  S  W  L  S  V  L  S  T  S  F  *  V  S  T  G  *  S  M  K  L  *  I  I  L  *  F  Q  I  G  H  S  L  *  R  *  Q  *  R  C  S  V  F  K  S  G  A  F  *  L  E  V  *  Y  F  R  *  S  G  W  V  C  V  H  P  I  L  V  K  F  P  M  V  M  F  L  V  L  K  R  C  *  N  *  I  S  Y  V  H  I  L  C  H  F  A  F   </first_frame>
            <second_frame>  T  S  N  K  E  D  A  T  D  N  Q  K  R  K  E  I  E  D  K  L  Q  V  L  N  M  K  K  H  G  L  V  Q  L  L  K  Q  :  I  L  N  A  E  E  E  L  K  R  R  S  M  Q  G  M  A  V  R  P  S  P  P  L  Q  V  D  T  T  N  D  T  G  S  I  T  K  L  N  T  P  R  M  G  L  D  G  N  P  I  G  E  V  D  G  D  G  G  D  D  A  S  N  Q  N  T  L  P  R  N  L  L  R  L  S  S  T  S  P  S  S  D  S  Q  L  R  K  T  P  Y  N  V  :  V  P  L  A  S  R  S  V  G  V  T  V  S  P  S  R  F  A  P  P  G  Q  Q  G  Q  P  S  S  L  P  P  V  S  L  S  G  T  N  I  V  A  S  S  P  S  P  V  A  S  G  G  T  S  A  F  R  D  R  F  A  S  P  *  K  W  E  L  C  *  L  L  L  L  L  S  A  G  F  L  F  S  Q  P  H  S  K  F  Q  L  A  N  L  *  S  C  K  L  F  C  S  S  K  L  V  I  R  C  N  G  S  S  D  D  A  V  S  L  S  L  V  P  S  S  W  K  Y  S  I  S  V  N  L  A  G  C  V  S  I  R  Y  L  *  S  F  P  W  S  C  F  *  F  L  K  D  V  R  T  E  Y  P  M  Y  I  Y  Y  A  I  L  L  L  </second_frame>
            <third_frame>   L  A  T  K  R  M  Q  L  I  I  R  K  E  R  R  L  R  I  N  Y  K  F  *  I  *  K  S  M  V  W  Y  N  Y  *  N  R :   F  *  M  Q  K  R  S  *  R  D  E  A  C  K  E  W  Q  C  G  H  H  P  H  F  K  W  I  Q  Q  T  T  L  D  L  *  L  N  *  T  H  L  E  W  A  W  M  V  T  P  S  V  R  W  M  E  M  E  V  M  M  H  P  T  R  T  H  F  L  G  I  C  F  V  *  A  V  H  H  H  L  Q  I  L  N  *  G  R  P  P  I  M  W :   F  L  S  L  H  D  L  L  E  L  L  L  V  L  H  G  L  H  L  R  D  S  K  G  N  L  Q  V  S  P  Q  C  P  Y  L  E  R  T  L  L  P  P  L  L  L  L  *  H  Q  A  A  L  Q  H  F  E  I  G  L  Q  A  H  E  N  G  S  C  A  S  C  Y  S  S  C  Q  L  A  F  C  S  L  N  L  I  L  S  F  N  W  L  I  Y  E  A  V  N  Y  S  V  V  P  N  W  S  F  A  V  T  V  A  V  T  M  Q  C  L  *  V  W  C  L  L  V  G  S  I  V  F  P  L  I  W  L  G  V  C  P  S  D  T  C  E  V  S  H  G  H  V  F  S  S  *  K  M  L  E  L  N  I  L  C  T  Y  I  M  P  F  C  F  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100537" stop="100644"/>
                    <exon start="100781" stop="101056"/>
                    <exon start="103900" stop="104088"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>570</number_coding_nucleotides>
                  <number_encoded_amino_acids>190</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSNKEDATDNQKRKEIEDKLQVLNMKKHGLVQLLKQILNAEEELKRRSMQGMAVRPSPPLQVDTTNDTGSITKLNTPRMGLDGNPIGEVDGDGGDDASNQNTLPRNLLRLSSTSPSSDSQLRKTPYNVVPLASRSVGVTVSPSRFAPPGQQGQPSSLPPVSLSGTNIVASSPSPVASGGTSAFRDRFASP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="100702" e_stop="101056"/>
            <exon e_start="103900" e_stop="104423"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.934" acc_prob="0.992" e_score="0.966"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.966">
            <gDNA_exon_boundary e_start="100702" e_stop="101056" e_length="355"/>
          </exon>
          <intron i_serial="1" don_prob="0.934" acc_prob="0.992">
            <gDNA_intron_boundary i_start="101057" i_stop="103899" i_length="2843"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="103900" e_stop="104423" e_length="524"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100702" stop="101056"/>
              <exon start="103900" stop="104423"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E553440" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100776" stop="101056"/>
              <exon start="103900" stop="104366"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379678" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100914" stop="101056"/>
              <exon start="103900" stop="104410"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369041" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101034" stop="101056"/>
              <exon start="103900" stop="104372"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350169" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101034" stop="101056"/>
              <exon start="103900" stop="104372"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350908" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101034" stop="101056"/>
              <exon start="103900" stop="104198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351777" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="6" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTTATTTGTTCTTATCTGTCAAATTATGTATTACTTAGCATGATCATTTTTTGTTTACAAGTATTGGCTTTTGGCAGATTTTGAATGCAGAAGAGGAGCTGAAGAGACGAAGCATGCAAGGAATGGCAGTGCGGCCATCACCCCCACTTCAAGTGGATACAACAAACGACACTGGATCTATAACTAAACTAAACACACCTAGAATGGGCTTGGATGGTAACCCCATCGGTGAGGTGGATGGAGATGGAGGTGATGATGCATCCAACCAGAACACACTTCCTCGGAATTTGCTTCGTTTGAGCAGTACATCACCATCTTCAGATTCTCAACTGAGGAAGACCCCCTATAATGTG : GTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTTAAGTCTGGTGCCTTCTAGTTGGAAGTATAGTATTTCCGTTAATCTGGCTGGGTGTGTGTCCATCCGATACTTGTGAAGTTTCCCATGGTCATGTTTTTAGTTCTTAAAAGATGTTAGAACTGAATATCCTATGTACATATATTATGCCATTTTGCTTTTAAGTCGTTAAGTTGT</gDNA_template>
            <first_frame> F  L  F  V  L  I  C  Q  I  M  Y  Y  L  A  *  S  F  F  V  Y  K  Y  W  L  L  A  D  F  E  C  R  R  G  A  E  E  T  K  H  A  R  N  G  S  A  A  I  T  P  T  S  S  G  Y  N  K  R  H  W  I  Y  N  *  T  K  H  T  *  N  G  L  G  W  *  P  H  R  *  G  G  W  R  W  R  *  *  C  I  Q  P  E  H  T  S  S  E  F  A  S  F  E  Q  Y  I  T  I  F  R  F  S  T  E  E  D  P  L  *  C   : G  S  S  R  F  T  I  C  W  S  Y  C  *  S  F  T  V  C  T  S  G  T  A  R  A  T  F  K  S  P  P  S  V  L  I  W  N  E  H  C  C  L  L  S  F  S  C  S  I  R  R  H  F  S  I  S  R  S  V  C  K  P  M  K  M  G  V  V  L  V  V  T  P  P  V  S  W  L  S  V  L  S  T  S  F  *  V  S  T  G  *  S  M  K  L  *  I  I  L  *  F  Q  I  G  H  S  L  *  R  *  Q  *  R  C  S  V  F  K  S  G  A  F  *  L  E  V  *  Y  F  R  *  S  G  W  V  C  V  H  P  I  L  V  K  F  P  M  V  M  F  L  V  L  K  R  C  *  N  *  I  S  Y  V  H  I  L  C  H  F  A  F  K  S  L  S  C </first_frame>
            <second_frame>  F  Y  L  F  L  S  V  K  L  C  I  T  *  H  D  H  F  L  F  T  S  I  G  F  W  Q  I  L  N  A  E  E  E  L  K  R  R  S  M  Q  G  M  A  V  R  P  S  P  P  L  Q  V  D  T  T  N  D  T  G  S  I  T  K  L  N  T  P  R  M  G  L  D  G  N  P  I  G  E  V  D  G  D  G  G  D  D  A  S  N  Q  N  T  L  P  R  N  L  L  R  L  S  S  T  S  P  S  S  D  S  Q  L  R  K  T  P  Y  N  V  :  V  P  L  A  S  R  S  V  G  V  T  V  S  P  S  R  F  A  P  P  G  Q  Q  G  Q  P  S  S  L  P  P  V  S  L  S  G  T  N  I  V  A  S  S  P  S  P  V  A  S  G  G  T  S  A  F  R  D  R  F  A  S  P  *  K  W  E  L  C  *  L  L  L  L  L  S  A  G  F  L  F  S  Q  P  H  S  K  F  Q  L  A  N  L  *  S  C  K  L  F  C  S  S  K  L  V  I  R  C  N  G  S  S  D  D  A  V  S  L  S  L  V  P  S  S  W  K  Y  S  I  S  V  N  L  A  G  C  V  S  I  R  Y  L  *  S  F  P  W  S  C  F  *  F  L  K  D  V  R  T  E  Y  P  M  Y  I  Y  Y  A  I  L  L  L  S  R  *  V   </second_frame>
            <third_frame>   F  I  C  S  Y  L  S  N  Y  V  L  L  S  M  I  I  F  C  L  Q  V  L  A  F  G  R  F  *  M  Q  K  R  S  *  R  D  E  A  C  K  E  W  Q  C  G  H  H  P  H  F  K  W  I  Q  Q  T  T  L  D  L  *  L  N  *  T  H  L  E  W  A  W  M  V  T  P  S  V  R  W  M  E  M  E  V  M  M  H  P  T  R  T  H  F  L  G  I  C  F  V  *  A  V  H  H  H  L  Q  I  L  N  *  G  R  P  P  I  M  W :   F  L  S  L  H  D  L  L  E  L  L  L  V  L  H  G  L  H  L  R  D  S  K  G  N  L  Q  V  S  P  Q  C  P  Y  L  E  R  T  L  L  P  P  L  L  L  L  *  H  Q  A  A  L  Q  H  F  E  I  G  L  Q  A  H  E  N  G  S  C  A  S  C  Y  S  S  C  Q  L  A  F  C  S  L  N  L  I  L  S  F  N  W  L  I  Y  E  A  V  N  Y  S  V  V  P  N  W  S  F  A  V  T  V  A  V  T  M  Q  C  L  *  V  W  C  L  L  V  G  S  I  V  F  P  L  I  W  L  G  V  C  P  S  D  T  C  E  V  S  H  G  H  V  F  S  S  *  K  M  L  E  L  N  I  L  C  T  Y  I  M  P  F  C  F  *  V  V  K  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100742" stop="101056"/>
                    <exon start="103900" stop="104088"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>501</number_coding_nucleotides>
                  <number_encoded_amino_acids>167</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HDHFLFTSIGFWQILNAEEELKRRSMQGMAVRPSPPLQVDTTNDTGSITKLNTPRMGLDGNPIGEVDGDGGDDASNQNTLPRNLLRLSSTSPSSDSQLRKTPYNVVPLASRSVGVTVSPSRFAPPGQQGQPSSLPPVSLSGTNIVASSPSPVASGGTSAFRDRFASP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="7">
          <exon_coordinates>
            <exon e_start="103898" e_stop="104426"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.966"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.966">
            <gDNA_exon_boundary e_start="103898" e_stop="104426" e_length="529"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103898" stop="104426"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376545" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="7" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGTTCCTCTCGCTTCACGATCTGTTGGAGTTACTGTTAGTCCTTCACGGTTTGCACCTCCGGGACAGCAAGGGCAACCTTCAAGTCTCCCCCCAGTGTCCTTATCTGGAACGAACATTGTTGCCTCCTCTCCTTCTCCTGTAGCATCAGGCGGCACTTCAGCATTTCGAGATCGGTTTGCAAGCCCATGAAAATGGGAGTTGTGCTAGTTGTTACTCCTCCTGTCAGCTGGCTTTCTGTTCTCTCAACCTCATTCTAAGTTTCAACTGGCTAATCTATGAAGCTGTAAATTATTCTGTAGTTCCAAATTGGTCATTCGCTGTAACGGTAGCAGTGACGATGCAGTGTCTTTAAGTCTGGTGCCTTCTAGTTGGAAGTATAGTATTTCCGTTAATCTGGCTGGGTGTGTGTCCATCCGATACTTGTGAAGTTTCCCATGGTCATGTTTTTAGTTCTTAAAAGATGTTAGAACTGAATATCCTATGTACATATATTATGCCATTTTGCTTTTAAGTCGTTAAGTTGTATT</gDNA_template>
            <first_frame> R  F  L  S  L  H  D  L  L  E  L  L  L  V  L  H  G  L  H  L  R  D  S  K  G  N  L  Q  V  S  P  Q  C  P  Y  L  E  R  T  L  L  P  P  L  L  L  L  *  H  Q  A  A  L  Q  H  F  E  I  G  L  Q  A  H  E  N  G  S  C  A  S  C  Y  S  S  C  Q  L  A  F  C  S  L  N  L  I  L  S  F  N  W  L  I  Y  E  A  V  N  Y  S  V  V  P  N  W  S  F  A  V  T  V  A  V  T  M  Q  C  L  *  V  W  C  L  L  V  G  S  I  V  F  P  L  I  W  L  G  V  C  P  S  D  T  C  E  V  S  H  G  H  V  F  S  S  *  K  M  L  E  L  N  I  L  C  T  Y  I  M  P  F  C  F  *  V  V  K  L  Y  </first_frame>
            <second_frame>  G  S  S  R  F  T  I  C  W  S  Y  C  *  S  F  T  V  C  T  S  G  T  A  R  A  T  F  K  S  P  P  S  V  L  I  W  N  E  H  C  C  L  L  S  F  S  C  S  I  R  R  H  F  S  I  S  R  S  V  C  K  P  M  K  M  G  V  V  L  V  V  T  P  P  V  S  W  L  S  V  L  S  T  S  F  *  V  S  T  G  *  S  M  K  L  *  I  I  L  *  F  Q  I  G  H  S  L  *  R  *  Q  *  R  C  S  V  F  K  S  G  A  F  *  L  E  V  *  Y  F  R  *  S  G  W  V  C  V  H  P  I  L  V  K  F  P  M  V  M  F  L  V  L  K  R  C  *  N  *  I  S  Y  V  H  I  L  C  H  F  A  F  K  S  L  S  C  I </second_frame>
            <third_frame>   V  P  L  A  S  R  S  V  G  V  T  V  S  P  S  R  F  A  P  P  G  Q  Q  G  Q  P  S  S  L  P  P  V  S  L  S  G  T  N  I  V  A  S  S  P  S  P  V  A  S  G  G  T  S  A  F  R  D  R  F  A  S  P  *  K  W  E  L  C  *  L  L  L  L  L  S  A  G  F  L  F  S  Q  P  H  S  K  F  Q  L  A  N  L  *  S  C  K  L  F  C  S  S  K  L  V  I  R  C  N  G  S  S  D  D  A  V  S  L  S  L  V  P  S  S  W  K  Y  S  I  S  V  N  L  A  G  C  V  S  I  R  Y  L  *  S  F  P  W  S  C  F  *  F  L  K  D  V  R  T  E  Y  P  M  Y  I  Y  Y  A  I  L  L  L  S  R  *  V  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="7" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="103938" stop="104156"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFTVCTSGTARATFKSPPSVLIWNEHCCLLSFSCSIRRHFSISRSVCKPMKMGVVLVVTPPVSWLSVLSTSF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0002C17.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="7" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="104042" stop="104251"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HQAALQHFEIGLQAHENGSCASCYSSCQLAFCSLNLILSFNWLIYEAVNYSVVPNWSFAVTVAVTMQCL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 243 chains have been computed
$ 
$ memory statistics:
$ 328224 bytes spliced alignments in total
$ 154 spliced alignments have been stored
$ 2131 bytes was the average size of a spliced alignment
$ 25424 bytes predicted gene locations in total
$ 14 predicted gene locations have been stored
$ 1816 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 261 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 14:37:27
-->
