<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 11:31:06"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E352716" ref_strand="+" ref_description="SGN-E352716 [cTOS-11-H19]">
      <seq>gatctgtcccaggcttggctaacgtcacagttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaagtctacataagtattgctccccacaaaagtcaccagaccagacctatatactttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagcaattcataatttaatttaagaccagtagcaaatgaggaagatacatatgaaaatgtggatccagggtcaaataatacaaaagccatgcaatcacaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="-" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="16147" stop="15217"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15847" g_stop="15517" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="-" ref_id="SGN-E352716" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352716" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15847" e_stop="15517"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAATTTTAGCATTACAATCAAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCGAAGTCAACCATTTCTAAGATAACCAAGTCTACATGAGTATTGCTCCCCACAAAAGTCACAAGACAAGACCTATTCACCTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCACAATGTAAATTAAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCGAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAA</genome_strand>
        <mrna_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCATAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCACAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E352117" ref_strand="+" ref_description="SGN-E352117 [cTOS-13-N24]">
      <seq>tttgatcctgcctccacattttcatatgtatcttcctcatttgctactgttcttaatttacatagtgaatcgcttgacatacctattcgtgttctactccggtgggtgagtctgtgattgttgaaaaggtgtataggtcttgtcttgtgacatttgtgggagcaatactcatgtagacttggttatcctataaatggttgacttcgatgtaattctgggtatgacttggctgtctccaaattttgcaatcttggattgtaatgctaaaactgtaacgttggccaagcctgagatagatgcgttagtgtgggagggtgactacacttccactccagttcgtatcatctcctttctttgtgctaagagaatggttagtaaagggtgtttagctttcttggcacacctcagggatgatactacccaagtaccttcaattgagtcagtttcgatagtccgtgagtttctggatgtgtttcctgcagaccttcctggtatgccaccggatagggatattgacttttgcattgatctggagccgggtgatcaccccatttccatacccccttatagaatggctcccgctgagttgggggagttaaaggcccaacttcaagagttgttangtaagggcttcattangccaagtgcatccccttggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="+" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="15259" stop="16506"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15547" g_stop="16206" g_length="660"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="659" r_length="659" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="+" ref_id="SGN-E352117" ref_strand="+">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352117" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15547" e_stop="16206"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGATCCTCGATCCACATTTTCTTATGTATCTTCCTCATTTGCTAATGGTCTTAATTTACATTGTGAATTGCTTGACATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGATAGTTGAAAAGGTGAATAGGTCTTGTCTTGTGACTTTTGTGGGGAGCAATACTCATGTAGACTTGGTTATCTTAGAAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTTGATTGTAATGCTAAAATTGTGACGTTAGCCAAGCCTGGGACAGATCCATTAGTATGGGAGGGTGACTACACTTCCACTCCAGTTCGTATTATCTCCTTTCTTCGTGCTAAGAGAATGATTAGTAAGGGTTGTTTCGCTATCTTGGCACACCTCAAGGACGATACTACCCAAGTACCTTCAATGGAGTCTGTTTCGATAGTCCGTGAGTTTCTGGATGCGTTTCCTGCAGACCTTCCTGGTATGCCACCGGATAGAGATATTGACTTCTACATCGATCTTGAACC-GGTACTCGCCCTATTTCTATACCCCCTTATAGAATGGCTCCCGCTTAGTTAAGGGAGTTAAAGGCCCAACTTCAAGAGTTGTTGAGCAAAGGCGTCATTAGACCAAGTGCATCCCCTTGGG</genome_strand>
        <mrna_strand>TTTGATCCTGCCTCCACATTTTCATATGTATCTTCCTCATTTGCTACTGTTCTTAATTTACATAGTGAATCGCTTGACATACCTATTCGTG-TTCTACTCCGGTGGGTGAGTCTGTGATTGTTGAAAAGGTGTATAGGTCTTGTCTTGTGACATTTGT-GGGAGCAATACTCATGTAGACTTGGTTATCCTATAAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTGTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACTGTAACGTTGGCCAAGCCTGAGATAGATGCGTTAGTGTGGGAGGGTGACTACACTTCCACTCCAGTTCGTATCATCTCCTTTCTTTGTGCTAAGAGAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACACCTCAGGGATGATACTACCCAAGTACCTTCAATTGAGTCAGTTTCGATAGTCCGTGAGTTTCTGGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACCGGATAGGGATATTGACTTTTGCATTGATCTGGAGCCGGGTGATCACCCCATTTCCATACCCCCTTATAGAATGGCTCCCGCTGAGTTGGGGGAGTTAAAGGCCCAACTTCAAGAGTTGTTANGTAAGGGCTTCATTANGCCAAGTGCATCCCCTTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E577888" ref_strand="+" ref_description="SGN-E577888 [LE08BA01]">
      <seq>ctacatctcctaccatacaatgcttcaaatggagccatatcaatgcttgattgatagctattattgtatgaaaactccgctaagggtaggaagctatcccaatgaccaccaaactctatcacacacgcacgaagcatattctccaacacttgaatcgttcgctcagactgaccatcgggagaactagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="-" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="18614" stop="17837"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18314" g_stop="18138" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="-" ref_id="SGN-E577888" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>177</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E577888" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18314" e_stop="18138"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACATCTCCTCCCATACAATGCTTCGAAAGGAGTCATATCAATACTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAAGAAGTTATCCCAATGACCACCAAAGTGTATCACACATGCACGAAGCATATCATCCAACACTTGAATTGTTCGCTCAGACTGACCATCG</genome_strand>
        <mrna_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGATTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATTCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E554940" ref_strand="+" ref_description="SGN-E554940 [cTSC-5-O17]">
      <seq>aatttcctatggcacttggaaaattatttcaagtgtatgcgggttcgtagtgatgtgaacaagatcaacactgttgttttgtatctttcggagttggccatactatggtggaagcgtaaagagtctgacatcgcaaaggggacatgcacgttgaacacatgggagcagtttcgtgtggagttcaagaaggcgttcttcccgagcaacgttttcaatgaggcaaagcacaagatgagggagttgagacaaaagggcagcatacgcgcgtatgtgcgggagtttaccacccttacatttcagattcccaacctcagggacgatgacacgttgttctacttcatggattggctgcataactgggccagaacggagtttgaacggcggcaggtcaggactattgacgacgccattatgcaggccgaagccttgacagacttcaggcaggagaagtttctcagtgcctaggtggacgactaggtaggaagtcttgatgatagtggggaagacagtggcgaaggcgaggagcatacgccacaacccaaaaggcgtgacacctatggttccagcggcaagaagaccggagatcgtggcaacacggtaagggattccaaggatggttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="+" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="35830" stop="37049"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36130" g_stop="36749" g_length="620"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="620" r_length="620" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="+" ref_id="SGN-E554940" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>620</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E554940" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36130" e_stop="36749"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTCCTTTGGCACTTGGAGAAATATTTCAAGTGTATGCGGGTCCGTAGTGATGTGAACAAGATCAACACGGCTGTGTTGTATCTTTCAGAGTTGGCCATGCTATGGTGGAAACGTAAAGAGTCTGATATCGCAAAGGGGACGTGCGCGTTGAACAAATGGGAGCAGTTCCATGTGGAGTTCAAGAAGGCGTTCCTCCCTAGCAACGTCGTCTATGAGGCAAAGCGCAAGATGCGGGAGTTGAGACAAAAGGGCAGCATACGCGCGTATGTGCGGGAGTTTACCACCCTTACATTTCAGATTCCTGACCTCAAGGACGACGACACATTGTTCTACTTCATGGATGGGCTGAAAAATTGGGCCAGAACGGAGTTGGAACGGCGGCAAGTCAGGACTATAGACGATGCCATCACGCAGGCTGAAGCCTTGACAGACTTCAGGCGAGAGAAGTCTATTAGTGCAGAGGAGGACGACGAGGTAGGCAGTCATGATGATAGTGGGGATGACGGTGGCGAAGGCTAGGAGCAAACGCCACAACCCAAAAGGCGTGACACCTACGGGTCCAGCGGCAAGAAGCCCAGAGATCGTGGAAACACGGTACGGGATTCCAAGGATGGTTG</genome_strand>
        <mrna_strand>AATTTCCTATGGCACTTGGAAAATTATTTCAAGTGTATGCGGGTTCGTAGTGATGTGAACAAGATCAACACTGTTGTTTTGTATCTTTCGGAGTTGGCCATACTATGGTGGAAGCGTAAAGAGTCTGACATCGCAAAGGGGACATGCACGTTGAACACATGGGAGCAGTTTCGTGTGGAGTTCAAGAAGGCGTTCTTCCCGAGCAACGTTTTCAATGAGGCAAAGCACAAGATGAGGGAGTTGAGACAAAAGGGCAGCATACGCGCGTATGTGCGGGAGTTTACCACCCTTACATTTCAGATTCCCAACCTCAGGGACGATGACACGTTGTTCTACTTCATGGATTGGCTGCATAACTGGGCCAGAACGGAGTTTGAACGGCGGCAGGTCAGGACTATTGACGACGCCATTATGCAGGCCGAAGCCTTGACAGACTTCAGGCAGGAGAAGTTTCTCAGTGCCTAGGTGGACGACTAGGTAGGAAGTCTTGATGATAGTGGGGAAGACAGTGGCGAAGGCGAGGAGCATACGCCACAACCCAAAAGGCGTGACACCTATGGTTCCAGCGGCAAGAAGACCGGAGATCGTGGCAACACGGTAAGGGATTCCAAGGATGGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E260624" ref_strand="+" ref_description="SGN-E260624 [cLEG-54-E23]">
      <seq>tgaaactgagctctaaagaaaagtttctggttgttaggcaaaggccatctggtttaagtaaatttggttgagtaggcagccatggtggtgttgggagttgtttgtccacagccacagcatatcgttgtttcaattcgaacccaaattcctccaatttctacacaaacccaatattgtacaaggcgtaaagctttgatatttacttcttctatgatttcctctttcatatatacatctcatcactctcctgcaactgctttccaaatcgaaatgcctcaacaagaagaagacagactagttcacctctttcaggatacttccccttctgttgttttcattaaggaccttgagttggctaaaggctccaatgactctactaaggtgctagccgacgatgataatgcaaaagtggaagggacaggttcaggcttcatttgggataagtttggtcacattgtaaccaattaccatgtcattactaaattagctactgataacatcggactgcagcgttgtaaggtttctttagtgaatactaaaggagagagcatagttaaggatgcgaagatcgtaggtgttgatccagcatatgatctggccgttctcaaggttgatgttgaaggtgttgaagttaaaccagtctctgttggtacctctcgcggcctacgtgtaggtcaaagttgttttgccattggaaatccctatggatttgaaacactctcacaactggggtagttagtggattangcaggnaaatacctgcaccaaatggagctgccattaaaggcgctattcaaacagatgctgctattaatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="+" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="69728" stop="73770"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70028" g_stop="70339" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="312" r_length="312" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70340" i_stop="70938" i_length="599">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70939" g_stop="71082" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="456" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71083" i_stop="71385" i_length="303">
            <donor d_prob="0.351" d_score="1.00"/>
            <acceptor a_prob="0.823" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71386" g_stop="71448" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="519" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71449" i_stop="71558" i_length="110">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="71559" g_stop="71648" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="520" r_stop="609" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="71649" i_stop="72779" i_length="1131">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="72780" g_stop="72902" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="610" r_stop="731" r_length="122" r_score="0.992"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="72903" i_stop="73384" i_length="482">
            <donor d_prob="0.874" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="73385" g_stop="73468" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="732" r_stop="815" r_length="84" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="+" ref_id="SGN-E260624" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>816</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E260624" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70028" e_stop="70339"/>
          <exon e_start="70939" e_stop="71082"/>
          <exon e_start="71386" e_stop="71448"/>
          <exon e_start="71559" e_stop="71648"/>
          <exon e_start="72780" e_stop="72902"/>
          <exon e_start="73385" e_stop="73468"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAACTGAGCTCTAAAGAAAAGTTTCTGGTTGTTAGGCAAAGGCCATCTGGTTTAAGTAAATTTGGTTGAGTAGGCAGCCATGGTGGTGTTGGGAGTTGTTTGTCCACAGCCACAGCATATCGTTGTTTCAATTCGAACCCAAATTCCTCCAATTTCTACACAAACCCAATATTGTACAAGGCGTAAAGCTTTGATATTTACTTCTTCTATGATTTCCTCTTTCATATATACATCTCATCACTCTCCTGCAACTGCTTTCCAAATCGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAGGTATATAATTAATTCAATGGAAGAGGAAAACCCAATAATTGACTTGTTTGCCAAAATGTCTTCTAATTTCGTGGTCTATTTTTAAATTATTTGCTACTAGTGGAAAGTGAAGACTGAAAATTTAAGTAAGAAGCCATTAAATACTAACCCAACTTTGTGACTAAGGTATCTTCATAATATAATGTTGGAATTGAACTCTTGACAGTTGTGACTTGTAGGTTTACTTTGCAGTCGTTGTTAACAATCTTGTTGTATCTGAAAGACGTGGGTCTCATATTGATGTTACCGAATAGATGGTGCAGGAAAGAATGTGCACATTATTCTGAAGACCTTGTATTGGACAGATGACAGATATATTGAACAATATGATCCTCCTAAGCCATTTTGCACTAGTATGTTAGTCCACACAAGTCTAATATGGTTTAGTACCAGTAAAATGCCATACTTCAGACCTACGAGAAATTTAAATGTTTCTTGATCATCGAAAGATCTTTGCAACAACAATAAGACGAAAGTATCCTTTTTTGTATTATCATGTTTATTGATTAGTGAGTTTAGCTGTTTGAAATGTAGTAACAGAACTGATGATGCAAATGCAGGATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGATAAGTTTGGTCACATTGTACGATTGTTCGACTCTGTGGATTACAAATTTGCAATGAATATCCAAATTTTCTATGTTAATTGGATGAACTCTCTGCTTCTTATCTCAAGAAAGTTAAATGCTTGATATAAGACTTGAATTAAGATTCCATTGTTTTTTGTTTCCTGCCTCATATCTCGTTCAAATTTATGACCCTGCTTCAAATCTTGCTTCGGAAGTTTCTGTAAATTTGTTTTAGTACTGACCTAAAACAGTCACTTATAATTCTAAAATCAGACAGTTCGCTGAGCATGGGGCATGATTATTTTGGGTTAATCGCAGGTAACCAATTACCATGTCATTACTAAATTAGCTACTGATAACATCGGACTGCAGCGTTGTAAGGTTTTTCTGCATCCTTGTGTTTTATATCCCTTTGTTTTCAGTTCTTATTTGTATATTTAACAGGACTGCTCCATTTCAGGTAATTCTAATTTTATAGGTTTGCTTTTCAGGTTTCTTTAGTGAATACTAAAGGAGAGAGCATAGTTAAGGATGCGAAGATCGTAGGTGTTGATCCAGCATATGATCTGGCCGTTCTCAAGGTGTTAAACCGATATATTACTTAATAATGTTGTCAATTTCCATTATTTTTACTAATTTATTTTCTATACTGGTAGGTTTAGACTGGTAATTATAACTATCCAAATTTCTCCTTATAGATTGGTTAGTTGAAGTAACTATGACAAACAGAACATAATCTAACTCCTTCCATTCTATTTTATATGACAATATTTGAATGGCCACGGACATTGAGATATTAATTTTGGTTTATATATTATATTAGCTATTATGGAACAAAATACTAAAGTAATGGTTAAAGGTTTGATGGAGAATTCATCATATCAACGTGTTAAATTTGAATAATTAAACGAATTTGAGCCATTGAATTGTGAAAGTTGTGTGGAAATGGGATGGTATAAAATGTTTGAAATGTTTAAAACTGGCAAGATTTTCATATAACTTAGAAAGATGGTACTTCTACGTTCGGAATAGAGACGCAGAGTCATCATCAACCTATTCTTGTGAAATTATTGGGGATAATTTGATACGAATTTTAAACACGTAGCTAAAAAAAGCATCTATTTGCCTGTCCCAGGAAATTATATACAAGGTCTTCTATTTTCAGTCTATATATGAGGAATCGTCATGAGTTAGCAAGTTTTGCATCTGCTGCCAGCATGTTGCAACCCCTCCTCCCTTATCTGAGTTTAGGACTGGCAATATTAGCAAGCTCACACAGACGAAGTTAGTATGTTGATTTTGAACGTATTGCTTTCCAAGTATGATTTTGACCTTTATTATTATTCACTTATATATATAACTTATTTTCACTTTTATTTCCTTTTTCGAATGATGCTGACATGAGTTAGATTTTAAATGAGGAGATATGGTCACTGAGGTCTGAGGATTCATATAGCCAACCCTGATTAGTTTGGACTTAGGGGTTGTTTGTTGTTGTCATACAGTTCCAACACACCCTCACACTCCAAAATCTCAATTGTTATCTGTCATTGCTTCTCTCCTTTTAACAAAAAAAGCAATTTTATAGAGACAAGTGAAAACACTTGGATTAGATCTGATGAAAATGAAATGTTAAAAGACAATGACTATTAAATATGAAGAAAAAAATTTGTTCAAAATAAAGTTGTCTAACATTTGATATCTCACTGCAGGTTGATGTTGAAGGTGTTGAAGTTAAACCAGTCTCTGTTGGTACCTCTCGCGGCCTACGTGTAGGTCAAAGTTGTTTTGCCATTGGAAATCCCTATGGATTTGAAAACACTCTCACAACTGGGGTAGTACATTTCTACAGTTTATTTATAAGTTAAGAAATATACCCGTGTGGAGACTCATTTTATGGTTTCATTTCCAGGAAAAAGTGTTTTTAGCGTTTATTTTTCATGCATTTCTGTTCAACTTACTCAGTATATAACTTGTAAATCTTCATTTCCTTTGGAGTATGCTTAATGTTTTCATTTCTATTGAACGGGAGCTCTCTCCTTTTACTGTATATAGTTTTTAATTCGAAATAAACCAAAAAAAATATTTTATTCAGCTCATACTCTGAATATCCTAAAAATGCTTTAAACTATGGACTCTCCACAATTCAGTCATACCTATGCCAAAGGGAACCAAAATCATGAAACTACTGAAGTTTATAAATTAATTTGCTCATGTTTCTCCATGCCATAGAGAAAGGGGAAAAAACAATTATTCATAGGGAATAAAGATGGTTAATAAGTTACCAGTGTTTATTTGATAACCTCAAATGTTACAGGTAGTTAGTGGATTAGGCAGGGAAATACCTGCACCAAATGGAGCTGCCATTAAAGGCGCTATTCAAACAGATGCTGCTATTAAT</genome_strand>
        <mrna_strand>TGAAACTGAGCTCTAAAGAAAAGTTTCTGGTTGTTAGGCAAAGGCCATCTGGTTTAAGTAAATTTGGTTGAGTAGGCAGCCATGGTGGTGTTGGGAGTTGTTTGTCCACAGCCACAGCATATCGTTGTTTCAATTCGAACCCAAATTCCTCCAATTTCTACACAAACCCAATATTGTACAAGGCGTAAAGCTTTGATATTTACTTCTTCTATGATTTCCTCTTTCATATATACATCTCATCACTCTCCTGCAACTGCTTTCCAAATCGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGATAAGTTTGGTCACATT...............................................................................................................................................................................................................................................................................................................GTAACCAATTACCATGTCATTACTAAATTAGCTACTGATAACATCGGACTGCAGCGTTGTAAG..............................................................................................................GTTTCTTTAGTGAATACTAAAGGAGAGAGCATAGTTAAGGATGCGAAGATCGTAGGTGTTGATCCAGCATATGATCTGGCCGTTCTCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATGTTGAAGGTGTTGAAGTTAAACCAGTCTCTGTTGGTACCTCTCGCGGCCTACGTGTAGGTCAAAGTTGTTTTGCCATTGGAAATCCCTATGGATTTG-AAACACTCTCACAACTGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGTTAGTGGATTANGCAGGNAAATACCTGCACCAAATGGAGCTGCCATTAAAGGCGCTATTCAAACAGATGCTGCTATTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E264026" ref_strand="+" ref_description="SGN-E264026 [cLEG-64-J4]">
      <seq>tgaaactgagctctaaagaaaagtttctggttgttaggcaaaggccatctggtttaagtaaatttggttgagtaggcagccatggtggtgttgggagttgtttgtccacagccacagcatatcgttgtttcaattcgaacccaaattcctccaatttctacacaaacccaatattgtacaaggcgtaaagctttgatatttacttcttctatgatttcctctttcatatatacatctcatcactctcctgcaactgctttccaaatcgaaatgcctcaacaagaagaagacagactagttcacctctttcaggatacttccccttctgttgttttcattaaggaccttgagttggctaaaggctccaatgactctactaaggtgctagccgacgatgataatgcaaaagtggaagggacaggttcaggcttcatttgggaatagtttggtcacattgtaaccaattaccatgtcattactaaattagctactgataacatcggactgcagcgntgtaanggttctttagtgaatactaaaggagagagcatagttaaggatgcgaagatcgtaggtgttgatccagcatatgatctggccgttctcaaggttgatgttgaaagtgttgaagttaaaccagtctctgttggtacctctcgcggcctacgtgtaggtcaaagttgttttgccattggaaatccctatggatttgaaaacactctcacaactgggggtagttagtggattangcagggaaatacctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="+" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="69728" stop="73715"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70028" g_stop="70339" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="312" r_length="312" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70340" i_stop="70938" i_length="599">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70939" g_stop="71082" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="456" r_length="144" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71083" i_stop="71385" i_length="303">
            <donor d_prob="0.351" d_score="0.96"/>
            <acceptor a_prob="0.823" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71386" g_stop="71448" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="519" r_length="63" r_score="0.968"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71449" i_stop="71558" i_length="110">
            <donor d_prob="0.967" d_score="0.96"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="71559" g_stop="71648" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="520" r_stop="609" r_length="90" r_score="0.989"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="71649" i_stop="72779" i_length="1131">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="72780" g_stop="72902" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="610" r_stop="732" r_length="123" r_score="0.992"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="72903" i_stop="73384" i_length="482">
            <donor d_prob="0.874" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="73385" g_stop="73415" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="733" r_stop="764" r_length="32" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="+" ref_id="SGN-E264026" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E264026" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70028" e_stop="70339"/>
          <exon e_start="70939" e_stop="71082"/>
          <exon e_start="71386" e_stop="71448"/>
          <exon e_start="71559" e_stop="71648"/>
          <exon e_start="72780" e_stop="72902"/>
          <exon e_start="73385" e_stop="73415"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAACTGAGCTCTAAAGAAAAGTTTCTGGTTGTTAGGCAAAGGCCATCTGGTTTAAGTAAATTTGGTTGAGTAGGCAGCCATGGTGGTGTTGGGAGTTGTTTGTCCACAGCCACAGCATATCGTTGTTTCAATTCGAACCCAAATTCCTCCAATTTCTACACAAACCCAATATTGTACAAGGCGTAAAGCTTTGATATTTACTTCTTCTATGATTTCCTCTTTCATATATACATCTCATCACTCTCCTGCAACTGCTTTCCAAATCGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAGGTATATAATTAATTCAATGGAAGAGGAAAACCCAATAATTGACTTGTTTGCCAAAATGTCTTCTAATTTCGTGGTCTATTTTTAAATTATTTGCTACTAGTGGAAAGTGAAGACTGAAAATTTAAGTAAGAAGCCATTAAATACTAACCCAACTTTGTGACTAAGGTATCTTCATAATATAATGTTGGAATTGAACTCTTGACAGTTGTGACTTGTAGGTTTACTTTGCAGTCGTTGTTAACAATCTTGTTGTATCTGAAAGACGTGGGTCTCATATTGATGTTACCGAATAGATGGTGCAGGAAAGAATGTGCACATTATTCTGAAGACCTTGTATTGGACAGATGACAGATATATTGAACAATATGATCCTCCTAAGCCATTTTGCACTAGTATGTTAGTCCACACAAGTCTAATATGGTTTAGTACCAGTAAAATGCCATACTTCAGACCTACGAGAAATTTAAATGTTTCTTGATCATCGAAAGATCTTTGCAACAACAATAAGACGAAAGTATCCTTTTTTGTATTATCATGTTTATTGATTAGTGAGTTTAGCTGTTTGAAATGTAGTAACAGAACTGATGATGCAAATGCAGGATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGATAAGTTTGGTCACATTGTACGATTGTTCGACTCTGTGGATTACAAATTTGCAATGAATATCCAAATTTTCTATGTTAATTGGATGAACTCTCTGCTTCTTATCTCAAGAAAGTTAAATGCTTGATATAAGACTTGAATTAAGATTCCATTGTTTTTTGTTTCCTGCCTCATATCTCGTTCAAATTTATGACCCTGCTTCAAATCTTGCTTCGGAAGTTTCTGTAAATTTGTTTTAGTACTGACCTAAAACAGTCACTTATAATTCTAAAATCAGACAGTTCGCTGAGCATGGGGCATGATTATTTTGGGTTAATCGCAGGTAACCAATTACCATGTCATTACTAAATTAGCTACTGATAACATCGGACTGCAGCGTTGTAAGGTTTTTCTGCATCCTTGTGTTTTATATCCCTTTGTTTTCAGTTCTTATTTGTATATTTAACAGGACTGCTCCATTTCAGGTAATTCTAATTTTATAGGTTTGCTTTTCAGGTTTCTTTAGTGAATACTAAAGGAGAGAGCATAGTTAAGGATGCGAAGATCGTAGGTGTTGATCCAGCATATGATCTGGCCGTTCTCAAGGTGTTAAACCGATATATTACTTAATAATGTTGTCAATTTCCATTATTTTTACTAATTTATTTTCTATACTGGTAGGTTTAGACTGGTAATTATAACTATCCAAATTTCTCCTTATAGATTGGTTAGTTGAAGTAACTATGACAAACAGAACATAATCTAACTCCTTCCATTCTATTTTATATGACAATATTTGAATGGCCACGGACATTGAGATATTAATTTTGGTTTATATATTATATTAGCTATTATGGAACAAAATACTAAAGTAATGGTTAAAGGTTTGATGGAGAATTCATCATATCAACGTGTTAAATTTGAATAATTAAACGAATTTGAGCCATTGAATTGTGAAAGTTGTGTGGAAATGGGATGGTATAAAATGTTTGAAATGTTTAAAACTGGCAAGATTTTCATATAACTTAGAAAGATGGTACTTCTACGTTCGGAATAGAGACGCAGAGTCATCATCAACCTATTCTTGTGAAATTATTGGGGATAATTTGATACGAATTTTAAACACGTAGCTAAAAAAAGCATCTATTTGCCTGTCCCAGGAAATTATATACAAGGTCTTCTATTTTCAGTCTATATATGAGGAATCGTCATGAGTTAGCAAGTTTTGCATCTGCTGCCAGCATGTTGCAACCCCTCCTCCCTTATCTGAGTTTAGGACTGGCAATATTAGCAAGCTCACACAGACGAAGTTAGTATGTTGATTTTGAACGTATTGCTTTCCAAGTATGATTTTGACCTTTATTATTATTCACTTATATATATAACTTATTTTCACTTTTATTTCCTTTTTCGAATGATGCTGACATGAGTTAGATTTTAAATGAGGAGATATGGTCACTGAGGTCTGAGGATTCATATAGCCAACCCTGATTAGTTTGGACTTAGGGGTTGTTTGTTGTTGTCATACAGTTCCAACACACCCTCACACTCCAAAATCTCAATTGTTATCTGTCATTGCTTCTCTCCTTTTAACAAAAAAAGCAATTTTATAGAGACAAGTGAAAACACTTGGATTAGATCTGATGAAAATGAAATGTTAAAAGACAATGACTATTAAATATGAAGAAAAAAATTTGTTCAAAATAAAGTTGTCTAACATTTGATATCTCACTGCAGGTTGATGTTGAAGGTGTTGAAGTTAAACCAGTCTCTGTTGGTACCTCTCGCGGCCTACGTGTAGGTCAAAGTTGTTTTGCCATTGGAAATCCCTATGGATTTGAAAACACTCTCACAACTGGGGTAGTACATTTCTACAGTTTATTTATAAGTTAAGAAATATACCCGTGTGGAGACTCATTTTATGGTTTCATTTCCAGGAAAAAGTGTTTTTAGCGTTTATTTTTCATGCATTTCTGTTCAACTTACTCAGTATATAACTTGTAAATCTTCATTTCCTTTGGAGTATGCTTAATGTTTTCATTTCTATTGAACGGGAGCTCTCTCCTTTTACTGTATATAGTTTTTAATTCGAAATAAACCAAAAAAAATATTTTATTCAGCTCATACTCTGAATATCCTAAAAATGCTTTAAACTATGGACTCTCCACAATTCAGTCATACCTATGCCAAAGGGAACCAAAATCATGAAACTACTGAAGTTTATAAATTAATTTGCTCATGTTTCTCCATGCCATAGAGAAAGGGGAAAAAACAATTATTCATAGGGAATAAAGATGGTTAATAAGTTACCAGTGTTTATTTGATAACCTCAAATGTTACAG-GTAGTTAGTGGATTAGGCAGGGAAATACCTG</genome_strand>
        <mrna_strand>TGAAACTGAGCTCTAAAGAAAAGTTTCTGGTTGTTAGGCAAAGGCCATCTGGTTTAAGTAAATTTGGTTGAGTAGGCAGCCATGGTGGTGTTGGGAGTTGTTTGTCCACAGCCACAGCATATCGTTGTTTCAATTCGAACCCAAATTCCTCCAATTTCTACACAAACCCAATATTGTACAAGGCGTAAAGCTTTGATATTTACTTCTTCTATGATTTCCTCTTTCATATATACATCTCATCACTCTCCTGCAACTGCTTTCCAAATCGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGAATAGTTTGGTCACATT...............................................................................................................................................................................................................................................................................................................GTAACCAATTACCATGTCATTACTAAATTAGCTACTGATAACATCGGACTGCAGCGNTGTAAN..............................................................................................................GGTTCTTTAGTGAATACTAAAGGAGAGAGCATAGTTAAGGATGCGAAGATCGTAGGTGTTGATCCAGCATATGATCTGGCCGTTCTCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATGTTGAAAGTGTTGAAGTTAAACCAGTCTCTGTTGGTACCTCTCGCGGCCTACGTGTAGGTCAAAGTTGTTTTGCCATTGGAAATCCCTATGGATTTGAAAACACTCTCACAACTGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTAGTTAGTGGATTANGCAGGGAAATACCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E260141" ref_strand="+" ref_description="SGN-E260141 [cLEG-52-G10]">
      <seq>tgaaactgagctctaaagaaaagtttctggttgttaggcaaaggccatctggtttaagtaaatttggttgagtaggcagccatggtggtgttgggagttgtttgtccacagccacagcatatcgttgtttcaattcgaacccaaattcctccaatttctacacaaacccaatattgtacaaggcgtaaagctttgatatttacttcttctatgatttcctctttcatatatacatctcatcactctcctgcaactgctttccaaatcgaaatgcctcaacaagaagaagacagactagttcacctctttcaggatacttccccttctgttgttttcattaaggaccttgagttggctaaaggctccaatgactctactaaggtgctagccgacgatgataatgcaaaagtggaagggacaggttcaggcttcatttgggataagtttggtcacattgtaaccaattaccatgtcattactaaattagctactgataacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="+" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="69728" stop="71729"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70028" g_stop="70339" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="312" r_length="312" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70340" i_stop="70938" i_length="599">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70939" g_stop="71082" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="456" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71083" i_stop="71385" i_length="303">
            <donor d_prob="0.351" d_score="1.00"/>
            <acceptor a_prob="0.823" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71386" g_stop="71429" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="500" r_length="44" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="+" ref_id="SGN-E260141" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E260141" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70028" e_stop="70339"/>
          <exon e_start="70939" e_stop="71082"/>
          <exon e_start="71386" e_stop="71429"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAACTGAGCTCTAAAGAAAAGTTTCTGGTTGTTAGGCAAAGGCCATCTGGTTTAAGTAAATTTGGTTGAGTAGGCAGCCATGGTGGTGTTGGGAGTTGTTTGTCCACAGCCACAGCATATCGTTGTTTCAATTCGAACCCAAATTCCTCCAATTTCTACACAAACCCAATATTGTACAAGGCGTAAAGCTTTGATATTTACTTCTTCTATGATTTCCTCTTTCATATATACATCTCATCACTCTCCTGCAACTGCTTTCCAAATCGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAGGTATATAATTAATTCAATGGAAGAGGAAAACCCAATAATTGACTTGTTTGCCAAAATGTCTTCTAATTTCGTGGTCTATTTTTAAATTATTTGCTACTAGTGGAAAGTGAAGACTGAAAATTTAAGTAAGAAGCCATTAAATACTAACCCAACTTTGTGACTAAGGTATCTTCATAATATAATGTTGGAATTGAACTCTTGACAGTTGTGACTTGTAGGTTTACTTTGCAGTCGTTGTTAACAATCTTGTTGTATCTGAAAGACGTGGGTCTCATATTGATGTTACCGAATAGATGGTGCAGGAAAGAATGTGCACATTATTCTGAAGACCTTGTATTGGACAGATGACAGATATATTGAACAATATGATCCTCCTAAGCCATTTTGCACTAGTATGTTAGTCCACACAAGTCTAATATGGTTTAGTACCAGTAAAATGCCATACTTCAGACCTACGAGAAATTTAAATGTTTCTTGATCATCGAAAGATCTTTGCAACAACAATAAGACGAAAGTATCCTTTTTTGTATTATCATGTTTATTGATTAGTGAGTTTAGCTGTTTGAAATGTAGTAACAGAACTGATGATGCAAATGCAGGATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGATAAGTTTGGTCACATTGTACGATTGTTCGACTCTGTGGATTACAAATTTGCAATGAATATCCAAATTTTCTATGTTAATTGGATGAACTCTCTGCTTCTTATCTCAAGAAAGTTAAATGCTTGATATAAGACTTGAATTAAGATTCCATTGTTTTTTGTTTCCTGCCTCATATCTCGTTCAAATTTATGACCCTGCTTCAAATCTTGCTTCGGAAGTTTCTGTAAATTTGTTTTAGTACTGACCTAAAACAGTCACTTATAATTCTAAAATCAGACAGTTCGCTGAGCATGGGGCATGATTATTTTGGGTTAATCGCAGGTAACCAATTACCATGTCATTACTAAATTAGCTACTGATAACAT</genome_strand>
        <mrna_strand>TGAAACTGAGCTCTAAAGAAAAGTTTCTGGTTGTTAGGCAAAGGCCATCTGGTTTAAGTAAATTTGGTTGAGTAGGCAGCCATGGTGGTGTTGGGAGTTGTTTGTCCACAGCCACAGCATATCGTTGTTTCAATTCGAACCCAAATTCCTCCAATTTCTACACAAACCCAATATTGTACAAGGCGTAAAGCTTTGATATTTACTTCTTCTATGATTTCCTCTTTCATATATACATCTCATCACTCTCCTGCAACTGCTTTCCAAATCGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGATAAGTTTGGTCACATT...............................................................................................................................................................................................................................................................................................................GTAACCAATTACCATGTCATTACTAAATTAGCTACTGATAACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E264150" ref_strand="+" ref_description="SGN-E264150 [cLEG-64-J5]">
      <seq>tgaaactgagctctaaagaaaagtttctggttgttaggcaaaggccatctggtttaagtaaatttggttgagtaggcagccatggtggtgttgggagttgtttgtccacagccacagcatatcgttgtttcaattcgaacccaaattcctccaatttctacacaaacccaatattgtacaaggcgtaaagctttgatatttacttcttctatgatttcctctttcatatatacatctcatcactctcctgcaactgctttccaaatcgaaatgcctcaacaagaagaagacagactagttcacctctttcaggatacttccccttctgttgttttcattaaggaccttgagttggctaaaggctccaatgactctactaangtgctagccgacgatgataatgcaaaagtggaaaggacaggttcacgcttcatttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="+" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="69728" stop="71364"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70028" g_stop="70339" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="312" r_length="312" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70340" i_stop="70938" i_length="599">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70939" g_stop="71064" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="438" r_length="126" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="+" ref_id="SGN-E264150" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>438</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E264150" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70028" e_stop="70339"/>
          <exon e_start="70939" e_stop="71064"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAACTGAGCTCTAAAGAAAAGTTTCTGGTTGTTAGGCAAAGGCCATCTGGTTTAAGTAAATTTGGTTGAGTAGGCAGCCATGGTGGTGTTGGGAGTTGTTTGTCCACAGCCACAGCATATCGTTGTTTCAATTCGAACCCAAATTCCTCCAATTTCTACACAAACCCAATATTGTACAAGGCGTAAAGCTTTGATATTTACTTCTTCTATGATTTCCTCTTTCATATATACATCTCATCACTCTCCTGCAACTGCTTTCCAAATCGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAGGTATATAATTAATTCAATGGAAGAGGAAAACCCAATAATTGACTTGTTTGCCAAAATGTCTTCTAATTTCGTGGTCTATTTTTAAATTATTTGCTACTAGTGGAAAGTGAAGACTGAAAATTTAAGTAAGAAGCCATTAAATACTAACCCAACTTTGTGACTAAGGTATCTTCATAATATAATGTTGGAATTGAACTCTTGACAGTTGTGACTTGTAGGTTTACTTTGCAGTCGTTGTTAACAATCTTGTTGTATCTGAAAGACGTGGGTCTCATATTGATGTTACCGAATAGATGGTGCAGGAAAGAATGTGCACATTATTCTGAAGACCTTGTATTGGACAGATGACAGATATATTGAACAATATGATCCTCCTAAGCCATTTTGCACTAGTATGTTAGTCCACACAAGTCTAATATGGTTTAGTACCAGTAAAATGCCATACTTCAGACCTACGAGAAATTTAAATGTTTCTTGATCATCGAAAGATCTTTGCAACAACAATAAGACGAAAGTATCCTTTTTTGTATTATCATGTTTATTGATTAGTGAGTTTAGCTGTTTGAAATGTAGTAACAGAACTGATGATGCAAATGCAGGATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGG</genome_strand>
        <mrna_strand>TGAAACTGAGCTCTAAAGAAAAGTTTCTGGTTGTTAGGCAAAGGCCATCTGGTTTAAGTAAATTTGGTTGAGTAGGCAGCCATGGTGGTGTTGGGAGTTGTTTGTCCACAGCCACAGCATATCGTTGTTTCAATTCGAACCCAAATTCCTCCAATTTCTACACAAACCCAATATTGTACAAGGCGTAAAGCTTTGATATTTACTTCTTCTATGATTTCCTCTTTCATATATACATCTCATCACTCTCCTGCAACTGCTTTCCAAATCGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAANGTGCTAGCCGACGATGATAATGCAAAAGTGGAAAGGACAGGTTCACGCTTCATTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E207470" ref_strand="+" ref_description="SGN-E207470 [cLEC-36-K21]">
      <seq>gaaactgagctctaaagaaaagttcctggttgttaggcaaaggccatctggtttaagtaaatttggttgagtaggcagccatggtggtgttgggagttgtttgtccacagccacagcatatcgttgtttcaattcgaacccaaattcctccaatttctacacaaacccaatattgtacaaggcgtaaagctttgatatttacttcttctatgatttcctctttcatatatacatctcatcactctcctgcaactgctttccaaatcgaaatgcctcaacaagaagaagacagactagttcacctctttcaggatacttccccttctgttgttttcattaaggaccttgagttggctaaaggctccaatgactctactaaggtgctagccgacgatgataatgcaaaagtggaagggacaggttcaggcttcatttgggataagtttggtcacattgtttctttagtgaatactaaaggagagagcatagttaaggatgcgaagatcgtaggtgttgatccagcatatgatctggccgttctcaaggttgatgttgaaggtgttgaagttaaaccagtctctgttggtacctctcgcggcctacgtgtaggtca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="+" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="69729" stop="73147"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70029" g_stop="70339" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="311" r_length="311" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70340" i_stop="70938" i_length="599">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70939" g_stop="71082" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="455" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71083" i_stop="71558" i_length="476">
            <donor d_prob="0.351" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71559" g_stop="71648" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="545" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71649" i_stop="72779" i_length="1131">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="72780" g_stop="72847" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="546" r_stop="613" r_length="68" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="+" ref_id="SGN-E207470" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E207470" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70029" e_stop="70339"/>
          <exon e_start="70939" e_stop="71082"/>
          <exon e_start="71559" e_stop="71648"/>
          <exon e_start="72780" e_stop="72847"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAACTGAGCTCTAAAGAAAAGTTTCTGGTTGTTAGGCAAAGGCCATCTGGTTTAAGTAAATTTGGTTGAGTAGGCAGCCATGGTGGTGTTGGGAGTTGTTTGTCCACAGCCACAGCATATCGTTGTTTCAATTCGAACCCAAATTCCTCCAATTTCTACACAAACCCAATATTGTACAAGGCGTAAAGCTTTGATATTTACTTCTTCTATGATTTCCTCTTTCATATATACATCTCATCACTCTCCTGCAACTGCTTTCCAAATCGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAGGTATATAATTAATTCAATGGAAGAGGAAAACCCAATAATTGACTTGTTTGCCAAAATGTCTTCTAATTTCGTGGTCTATTTTTAAATTATTTGCTACTAGTGGAAAGTGAAGACTGAAAATTTAAGTAAGAAGCCATTAAATACTAACCCAACTTTGTGACTAAGGTATCTTCATAATATAATGTTGGAATTGAACTCTTGACAGTTGTGACTTGTAGGTTTACTTTGCAGTCGTTGTTAACAATCTTGTTGTATCTGAAAGACGTGGGTCTCATATTGATGTTACCGAATAGATGGTGCAGGAAAGAATGTGCACATTATTCTGAAGACCTTGTATTGGACAGATGACAGATATATTGAACAATATGATCCTCCTAAGCCATTTTGCACTAGTATGTTAGTCCACACAAGTCTAATATGGTTTAGTACCAGTAAAATGCCATACTTCAGACCTACGAGAAATTTAAATGTTTCTTGATCATCGAAAGATCTTTGCAACAACAATAAGACGAAAGTATCCTTTTTTGTATTATCATGTTTATTGATTAGTGAGTTTAGCTGTTTGAAATGTAGTAACAGAACTGATGATGCAAATGCAGGATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGATAAGTTTGGTCACATTGTACGATTGTTCGACTCTGTGGATTACAAATTTGCAATGAATATCCAAATTTTCTATGTTAATTGGATGAACTCTCTGCTTCTTATCTCAAGAAAGTTAAATGCTTGATATAAGACTTGAATTAAGATTCCATTGTTTTTTGTTTCCTGCCTCATATCTCGTTCAAATTTATGACCCTGCTTCAAATCTTGCTTCGGAAGTTTCTGTAAATTTGTTTTAGTACTGACCTAAAACAGTCACTTATAATTCTAAAATCAGACAGTTCGCTGAGCATGGGGCATGATTATTTTGGGTTAATCGCAGGTAACCAATTACCATGTCATTACTAAATTAGCTACTGATAACATCGGACTGCAGCGTTGTAAGGTTTTTCTGCATCCTTGTGTTTTATATCCCTTTGTTTTCAGTTCTTATTTGTATATTTAACAGGACTGCTCCATTTCAGGTAATTCTAATTTTATAGGTTTGCTTTTCAGGTTTCTTTAGTGAATACTAAAGGAGAGAGCATAGTTAAGGATGCGAAGATCGTAGGTGTTGATCCAGCATATGATCTGGCCGTTCTCAAGGTGTTAAACCGATATATTACTTAATAATGTTGTCAATTTCCATTATTTTTACTAATTTATTTTCTATACTGGTAGGTTTAGACTGGTAATTATAACTATCCAAATTTCTCCTTATAGATTGGTTAGTTGAAGTAACTATGACAAACAGAACATAATCTAACTCCTTCCATTCTATTTTATATGACAATATTTGAATGGCCACGGACATTGAGATATTAATTTTGGTTTATATATTATATTAGCTATTATGGAACAAAATACTAAAGTAATGGTTAAAGGTTTGATGGAGAATTCATCATATCAACGTGTTAAATTTGAATAATTAAACGAATTTGAGCCATTGAATTGTGAAAGTTGTGTGGAAATGGGATGGTATAAAATGTTTGAAATGTTTAAAACTGGCAAGATTTTCATATAACTTAGAAAGATGGTACTTCTACGTTCGGAATAGAGACGCAGAGTCATCATCAACCTATTCTTGTGAAATTATTGGGGATAATTTGATACGAATTTTAAACACGTAGCTAAAAAAAGCATCTATTTGCCTGTCCCAGGAAATTATATACAAGGTCTTCTATTTTCAGTCTATATATGAGGAATCGTCATGAGTTAGCAAGTTTTGCATCTGCTGCCAGCATGTTGCAACCCCTCCTCCCTTATCTGAGTTTAGGACTGGCAATATTAGCAAGCTCACACAGACGAAGTTAGTATGTTGATTTTGAACGTATTGCTTTCCAAGTATGATTTTGACCTTTATTATTATTCACTTATATATATAACTTATTTTCACTTTTATTTCCTTTTTCGAATGATGCTGACATGAGTTAGATTTTAAATGAGGAGATATGGTCACTGAGGTCTGAGGATTCATATAGCCAACCCTGATTAGTTTGGACTTAGGGGTTGTTTGTTGTTGTCATACAGTTCCAACACACCCTCACACTCCAAAATCTCAATTGTTATCTGTCATTGCTTCTCTCCTTTTAACAAAAAAAGCAATTTTATAGAGACAAGTGAAAACACTTGGATTAGATCTGATGAAAATGAAATGTTAAAAGACAATGACTATTAAATATGAAGAAAAAAATTTGTTCAAAATAAAGTTGTCTAACATTTGATATCTCACTGCAGGTTGATGTTGAAGGTGTTGAAGTTAAACCAGTCTCTGTTGGTACCTCTCGCGGCCTACGTGTAGGTCA</genome_strand>
        <mrna_strand>GAAACTGAGCTCTAAAGAAAAGTTCCTGGTTGTTAGGCAAAGGCCATCTGGTTTAAGTAAATTTGGTTGAGTAGGCAGCCATGGTGGTGTTGGGAGTTGTTTGTCCACAGCCACAGCATATCGTTGTTTCAATTCGAACCCAAATTCCTCCAATTTCTACACAAACCCAATATTGTACAAGGCGTAAAGCTTTGATATTTACTTCTTCTATGATTTCCTCTTTCATATATACATCTCATCACTCTCCTGCAACTGCTTTCCAAATCGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGATAAGTTTGGTCACATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCTTTAGTGAATACTAAAGGAGAGAGCATAGTTAAGGATGCGAAGATCGTAGGTGTTGATCCAGCATATGATCTGGCCGTTCTCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATGTTGAAGGTGTTGAAGTTAAACCAGTCTCTGTTGGTACCTCTCGCGGCCTACGTGTAGGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E205698" ref_strand="+" ref_description="SGN-E205698 [cLEC-21-E18]">
      <seq>gaaactgatctctaaagaaaagtttctggttgttaggcgaaggccatctgggttaagtaaatttggttgagtaggcagccatggtggtgttgggagttgtttgtccacagccacagcatatcgttgtttcaattcgaacccaaattcctccaatttctacacaaacccaatattgtacaaggcgtaaagctttgatatttacttcttctatgatttcctctttcatatatacatctcatcactctcctgcaactgctttccaaatcgaaatgcctcaacaagaagaagacagactagttcacctctttcaggatacttccccttctgttgttttcattaaggaccttgagttggctaaaggctccaatgactctactaaggtgctagccgacgatgataatgcaaaagtggaagggacaggttcaggcttcatttgggataagtttggtcacattgtttctttagtgaatactaaaggagagagcatagttaaagatgcgaagatcgtaagtgttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="+" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="69729" stop="71921"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70029" g_stop="70339" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="311" r_length="311" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70340" i_stop="70938" i_length="599">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70939" g_stop="71082" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="455" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71083" i_stop="71558" i_length="476">
            <donor d_prob="0.351" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71559" g_stop="71621" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="518" r_length="63" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="+" ref_id="SGN-E205698" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>518</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E205698" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70029" e_stop="70339"/>
          <exon e_start="70939" e_stop="71082"/>
          <exon e_start="71559" e_stop="71621"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAACTGAGCTCTAAAGAAAAGTTTCTGGTTGTTAGGCAAAGGCCATCTGGTTTAAGTAAATTTGGTTGAGTAGGCAGCCATGGTGGTGTTGGGAGTTGTTTGTCCACAGCCACAGCATATCGTTGTTTCAATTCGAACCCAAATTCCTCCAATTTCTACACAAACCCAATATTGTACAAGGCGTAAAGCTTTGATATTTACTTCTTCTATGATTTCCTCTTTCATATATACATCTCATCACTCTCCTGCAACTGCTTTCCAAATCGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAGGTATATAATTAATTCAATGGAAGAGGAAAACCCAATAATTGACTTGTTTGCCAAAATGTCTTCTAATTTCGTGGTCTATTTTTAAATTATTTGCTACTAGTGGAAAGTGAAGACTGAAAATTTAAGTAAGAAGCCATTAAATACTAACCCAACTTTGTGACTAAGGTATCTTCATAATATAATGTTGGAATTGAACTCTTGACAGTTGTGACTTGTAGGTTTACTTTGCAGTCGTTGTTAACAATCTTGTTGTATCTGAAAGACGTGGGTCTCATATTGATGTTACCGAATAGATGGTGCAGGAAAGAATGTGCACATTATTCTGAAGACCTTGTATTGGACAGATGACAGATATATTGAACAATATGATCCTCCTAAGCCATTTTGCACTAGTATGTTAGTCCACACAAGTCTAATATGGTTTAGTACCAGTAAAATGCCATACTTCAGACCTACGAGAAATTTAAATGTTTCTTGATCATCGAAAGATCTTTGCAACAACAATAAGACGAAAGTATCCTTTTTTGTATTATCATGTTTATTGATTAGTGAGTTTAGCTGTTTGAAATGTAGTAACAGAACTGATGATGCAAATGCAGGATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGATAAGTTTGGTCACATTGTACGATTGTTCGACTCTGTGGATTACAAATTTGCAATGAATATCCAAATTTTCTATGTTAATTGGATGAACTCTCTGCTTCTTATCTCAAGAAAGTTAAATGCTTGATATAAGACTTGAATTAAGATTCCATTGTTTTTTGTTTCCTGCCTCATATCTCGTTCAAATTTATGACCCTGCTTCAAATCTTGCTTCGGAAGTTTCTGTAAATTTGTTTTAGTACTGACCTAAAACAGTCACTTATAATTCTAAAATCAGACAGTTCGCTGAGCATGGGGCATGATTATTTTGGGTTAATCGCAGGTAACCAATTACCATGTCATTACTAAATTAGCTACTGATAACATCGGACTGCAGCGTTGTAAGGTTTTTCTGCATCCTTGTGTTTTATATCCCTTTGTTTTCAGTTCTTATTTGTATATTTAACAGGACTGCTCCATTTCAGGTAATTCTAATTTTATAGGTTTGCTTTTCAGGTTTCTTTAGTGAATACTAAAGGAGAGAGCATAGTTAAGGATGCGAAGATCGTAGGTGTTGAT</genome_strand>
        <mrna_strand>GAAACTGATCTCTAAAGAAAAGTTTCTGGTTGTTAGGCGAAGGCCATCTGGGTTAAGTAAATTTGGTTGAGTAGGCAGCCATGGTGGTGTTGGGAGTTGTTTGTCCACAGCCACAGCATATCGTTGTTTCAATTCGAACCCAAATTCCTCCAATTTCTACACAAACCCAATATTGTACAAGGCGTAAAGCTTTGATATTTACTTCTTCTATGATTTCCTCTTTCATATATACATCTCATCACTCTCCTGCAACTGCTTTCCAAATCGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGATAAGTTTGGTCACATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCTTTAGTGAATACTAAAGGAGAGAGCATAGTTAAAGATGCGAAGATCGTAAGTGTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E252830" ref_strand="+" ref_description="SGN-E252830 [cLEG-16-A12]">
      <seq>ggccatctggtttaagtaaatttttttgagtaggcagccatggtggtgttgggagttgtttgtccacagccacagcatatcgttgtttcaattcgaacccaaattcctccaatttctacacaaacccaatattgtacaaggcgtaaagctttgatatttacttcttctatgatttcctctttcatatatacatctcatcactctcctgcaactgctttccaaatcgaaatgcctcaacaagaagaagacagactagttcacctctttcaggatacttccccttctgttgttttcattaaggaccttgagttggctaaaggctccaatgactctactaaggtgctagccgacgatgataatgcaaaagtggaagggacaggttcaggcttcatttgggataagtttggtcacattgtaaccaattaccatgtcattactaaattagctactgataacatcggactgcagcgttgtaaggtttctttagtgaatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="+" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="69770" stop="71876"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70070" g_stop="70339" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="270" r_length="270" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70340" i_stop="70938" i_length="599">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70939" g_stop="71082" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="414" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71083" i_stop="71385" i_length="303">
            <donor d_prob="0.351" d_score="1.00"/>
            <acceptor a_prob="0.823" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71386" g_stop="71448" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="477" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71449" i_stop="71558" i_length="110">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="71559" g_stop="71576" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="478" r_stop="495" r_length="18" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="+" ref_id="SGN-E252830" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>495</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E252830" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70070" e_stop="70339"/>
          <exon e_start="70939" e_stop="71082"/>
          <exon e_start="71386" e_stop="71448"/>
          <exon e_start="71559" e_stop="71576"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCCATCTGGTTTAAGTAAATTTGGTTGAGTAGGCAGCCATGGTGGTGTTGGGAGTTGTTTGTCCACAGCCACAGCATATCGTTGTTTCAATTCGAACCCAAATTCCTCCAATTTCTACACAAACCCAATATTGTACAAGGCGTAAAGCTTTGATATTTACTTCTTCTATGATTTCCTCTTTCATATATACATCTCATCACTCTCCTGCAACTGCTTTCCAAATCGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAGGTATATAATTAATTCAATGGAAGAGGAAAACCCAATAATTGACTTGTTTGCCAAAATGTCTTCTAATTTCGTGGTCTATTTTTAAATTATTTGCTACTAGTGGAAAGTGAAGACTGAAAATTTAAGTAAGAAGCCATTAAATACTAACCCAACTTTGTGACTAAGGTATCTTCATAATATAATGTTGGAATTGAACTCTTGACAGTTGTGACTTGTAGGTTTACTTTGCAGTCGTTGTTAACAATCTTGTTGTATCTGAAAGACGTGGGTCTCATATTGATGTTACCGAATAGATGGTGCAGGAAAGAATGTGCACATTATTCTGAAGACCTTGTATTGGACAGATGACAGATATATTGAACAATATGATCCTCCTAAGCCATTTTGCACTAGTATGTTAGTCCACACAAGTCTAATATGGTTTAGTACCAGTAAAATGCCATACTTCAGACCTACGAGAAATTTAAATGTTTCTTGATCATCGAAAGATCTTTGCAACAACAATAAGACGAAAGTATCCTTTTTTGTATTATCATGTTTATTGATTAGTGAGTTTAGCTGTTTGAAATGTAGTAACAGAACTGATGATGCAAATGCAGGATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGATAAGTTTGGTCACATTGTACGATTGTTCGACTCTGTGGATTACAAATTTGCAATGAATATCCAAATTTTCTATGTTAATTGGATGAACTCTCTGCTTCTTATCTCAAGAAAGTTAAATGCTTGATATAAGACTTGAATTAAGATTCCATTGTTTTTTGTTTCCTGCCTCATATCTCGTTCAAATTTATGACCCTGCTTCAAATCTTGCTTCGGAAGTTTCTGTAAATTTGTTTTAGTACTGACCTAAAACAGTCACTTATAATTCTAAAATCAGACAGTTCGCTGAGCATGGGGCATGATTATTTTGGGTTAATCGCAGGTAACCAATTACCATGTCATTACTAAATTAGCTACTGATAACATCGGACTGCAGCGTTGTAAGGTTTTTCTGCATCCTTGTGTTTTATATCCCTTTGTTTTCAGTTCTTATTTGTATATTTAACAGGACTGCTCCATTTCAGGTAATTCTAATTTTATAGGTTTGCTTTTCAGGTTTCTTTAGTGAATACT</genome_strand>
        <mrna_strand>GGCCATCTGGTTTAAGTAAATTTTTTTGAGTAGGCAGCCATGGTGGTGTTGGGAGTTGTTTGTCCACAGCCACAGCATATCGTTGTTTCAATTCGAACCCAAATTCCTCCAATTTCTACACAAACCCAATATTGTACAAGGCGTAAAGCTTTGATATTTACTTCTTCTATGATTTCCTCTTTCATATATACATCTCATCACTCTCCTGCAACTGCTTTCCAAATCGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGATAAGTTTGGTCACATT...............................................................................................................................................................................................................................................................................................................GTAACCAATTACCATGTCATTACTAAATTAGCTACTGATAACATCGGACTGCAGCGTTGTAAG..............................................................................................................GTTTCTTTAGTGAATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E245506" ref_strand="+" ref_description="SGN-E245506 [cLEF-43-L17]">
      <seq>tttggttgagtaggcagccatggtggtgttgggagttgtttgtccacagccacagcatatcgttgtttcaattcgaacccaaattcctccaatttctacacaaacccaatattgtgcaaggggtnnaggtttggtttttacttnttttatgatttcctattttatatattcatataataactctcctgcaactgctttccaaatcgaaatgcctcaacaagaagaagacagactagttcacctctttcaggatacttccccttctgttgttttcattaaggaccttgagttggctaaaggctccaatgactctactaaggtgctagccgacgatgataatgcaaaagtggaagggacaggttcaggcttcatttgggataagtttggtcacattgtaaccaattaccatgtcattactaaattagctactgataacatcggactgcagcgttgtaaggtttctttagtgaatactaaaggagagagcatagttaaggatgcgaagatcgtaagtgttgatccagcatatgatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="+" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="69790" stop="71935"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70090" g_stop="70339" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="250" r_length="250" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70340" i_stop="70938" i_length="599">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70939" g_stop="71082" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="394" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71083" i_stop="71385" i_length="303">
            <donor d_prob="0.351" d_score="1.00"/>
            <acceptor a_prob="0.823" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71386" g_stop="71448" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="457" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71449" i_stop="71558" i_length="110">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="71559" g_stop="71635" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="534" r_length="77" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="+" ref_id="SGN-E245506" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E245506" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70090" e_stop="70339"/>
          <exon e_start="70939" e_stop="71082"/>
          <exon e_start="71386" e_stop="71448"/>
          <exon e_start="71559" e_stop="71635"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGGTTGAGTAGGCAGCCATGGTGGTGTTGGGAGTTGTTTGTCCACAGCCACAGCATATCGTTGTTTCAATTCGAACCCAAATTCCTCCAATTTCTACACAAACCCAATATTGTACAAGGCGTAAAGCTTTGATATTTACTTCTTCTATGATTTCCTCTTTCATATATACATCTCATCACTCTCCTGCAACTGCTTTCCAAATCGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAGGTATATAATTAATTCAATGGAAGAGGAAAACCCAATAATTGACTTGTTTGCCAAAATGTCTTCTAATTTCGTGGTCTATTTTTAAATTATTTGCTACTAGTGGAAAGTGAAGACTGAAAATTTAAGTAAGAAGCCATTAAATACTAACCCAACTTTGTGACTAAGGTATCTTCATAATATAATGTTGGAATTGAACTCTTGACAGTTGTGACTTGTAGGTTTACTTTGCAGTCGTTGTTAACAATCTTGTTGTATCTGAAAGACGTGGGTCTCATATTGATGTTACCGAATAGATGGTGCAGGAAAGAATGTGCACATTATTCTGAAGACCTTGTATTGGACAGATGACAGATATATTGAACAATATGATCCTCCTAAGCCATTTTGCACTAGTATGTTAGTCCACACAAGTCTAATATGGTTTAGTACCAGTAAAATGCCATACTTCAGACCTACGAGAAATTTAAATGTTTCTTGATCATCGAAAGATCTTTGCAACAACAATAAGACGAAAGTATCCTTTTTTGTATTATCATGTTTATTGATTAGTGAGTTTAGCTGTTTGAAATGTAGTAACAGAACTGATGATGCAAATGCAGGATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGATAAGTTTGGTCACATTGTACGATTGTTCGACTCTGTGGATTACAAATTTGCAATGAATATCCAAATTTTCTATGTTAATTGGATGAACTCTCTGCTTCTTATCTCAAGAAAGTTAAATGCTTGATATAAGACTTGAATTAAGATTCCATTGTTTTTTGTTTCCTGCCTCATATCTCGTTCAAATTTATGACCCTGCTTCAAATCTTGCTTCGGAAGTTTCTGTAAATTTGTTTTAGTACTGACCTAAAACAGTCACTTATAATTCTAAAATCAGACAGTTCGCTGAGCATGGGGCATGATTATTTTGGGTTAATCGCAGGTAACCAATTACCATGTCATTACTAAATTAGCTACTGATAACATCGGACTGCAGCGTTGTAAGGTTTTTCTGCATCCTTGTGTTTTATATCCCTTTGTTTTCAGTTCTTATTTGTATATTTAACAGGACTGCTCCATTTCAGGTAATTCTAATTTTATAGGTTTGCTTTTCAGGTTTCTTTAGTGAATACTAAAGGAGAGAGCATAGTTAAGGATGCGAAGATCGTAGGTGTTGATCCAGCATATGATCT</genome_strand>
        <mrna_strand>TTTGGTTGAGTAGGCAGCCATGGTGGTGTTGGGAGTTGTTTGTCCACAGCCACAGCATATCGTTGTTTCAATTCGAACCCAAATTCCTCCAATTTCTACACAAACCCAATATTGTGCAAGGGGTNNAGGTTTGGTTTTTACTTNTTTTATGATTTCCTATTTTATATATTCATATAATAACTCTCCTGCAACTGCTTTCCAAATCGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGATAAGTTTGGTCACATT...............................................................................................................................................................................................................................................................................................................GTAACCAATTACCATGTCATTACTAAATTAGCTACTGATAACATCGGACTGCAGCGTTGTAAG..............................................................................................................GTTTCTTTAGTGAATACTAAAGGAGAGAGCATAGTTAAGGATGCGAAGATCGTAAGTGTTGATCCAGCATATGATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E251788" ref_strand="+" ref_description="SGN-E251788 [cLEG-15-J22]">
      <seq>agccatggtggtgttgggagttgtttgtccacagccacagcatatcgttgtttcaattcgaacccaaattcctccaatttctacacaaacccaatattgtacaaggcgtaaagctttgatatttacttcttctatgatttcctctttcatatatacatctcatcactctcctgcaactgctttccaaatcgaaatgcctcaacaagaagaagacagactagttcacctctttcaggatacttccccttctgttgttttcattaaggaccttgagttggctaaaggctccaatgactctactaaggtgctagccgacgatgataatgcaaaagtggaagggacaggttcaggcttcatttgggataagtttggtcacattgtaaccaattaccatgtcattactaaattagctactgataacatcggactgcagcgttgtaaggtttctttagtgaatactaaaggagagagcatagttaaggatgcgaagatcgtaggtgttgatccagcatatgatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="+" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="69805" stop="71935"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70105" g_stop="70339" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="235" r_length="235" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70340" i_stop="70938" i_length="599">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70939" g_stop="71082" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="379" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71083" i_stop="71385" i_length="303">
            <donor d_prob="0.351" d_score="1.00"/>
            <acceptor a_prob="0.823" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71386" g_stop="71448" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="380" r_stop="442" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71449" i_stop="71558" i_length="110">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="71559" g_stop="71635" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="519" r_length="77" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="+" ref_id="SGN-E251788" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E251788" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70105" e_stop="70339"/>
          <exon e_start="70939" e_stop="71082"/>
          <exon e_start="71386" e_stop="71448"/>
          <exon e_start="71559" e_stop="71635"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCCATGGTGGTGTTGGGAGTTGTTTGTCCACAGCCACAGCATATCGTTGTTTCAATTCGAACCCAAATTCCTCCAATTTCTACACAAACCCAATATTGTACAAGGCGTAAAGCTTTGATATTTACTTCTTCTATGATTTCCTCTTTCATATATACATCTCATCACTCTCCTGCAACTGCTTTCCAAATCGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAGGTATATAATTAATTCAATGGAAGAGGAAAACCCAATAATTGACTTGTTTGCCAAAATGTCTTCTAATTTCGTGGTCTATTTTTAAATTATTTGCTACTAGTGGAAAGTGAAGACTGAAAATTTAAGTAAGAAGCCATTAAATACTAACCCAACTTTGTGACTAAGGTATCTTCATAATATAATGTTGGAATTGAACTCTTGACAGTTGTGACTTGTAGGTTTACTTTGCAGTCGTTGTTAACAATCTTGTTGTATCTGAAAGACGTGGGTCTCATATTGATGTTACCGAATAGATGGTGCAGGAAAGAATGTGCACATTATTCTGAAGACCTTGTATTGGACAGATGACAGATATATTGAACAATATGATCCTCCTAAGCCATTTTGCACTAGTATGTTAGTCCACACAAGTCTAATATGGTTTAGTACCAGTAAAATGCCATACTTCAGACCTACGAGAAATTTAAATGTTTCTTGATCATCGAAAGATCTTTGCAACAACAATAAGACGAAAGTATCCTTTTTTGTATTATCATGTTTATTGATTAGTGAGTTTAGCTGTTTGAAATGTAGTAACAGAACTGATGATGCAAATGCAGGATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGATAAGTTTGGTCACATTGTACGATTGTTCGACTCTGTGGATTACAAATTTGCAATGAATATCCAAATTTTCTATGTTAATTGGATGAACTCTCTGCTTCTTATCTCAAGAAAGTTAAATGCTTGATATAAGACTTGAATTAAGATTCCATTGTTTTTTGTTTCCTGCCTCATATCTCGTTCAAATTTATGACCCTGCTTCAAATCTTGCTTCGGAAGTTTCTGTAAATTTGTTTTAGTACTGACCTAAAACAGTCACTTATAATTCTAAAATCAGACAGTTCGCTGAGCATGGGGCATGATTATTTTGGGTTAATCGCAGGTAACCAATTACCATGTCATTACTAAATTAGCTACTGATAACATCGGACTGCAGCGTTGTAAGGTTTTTCTGCATCCTTGTGTTTTATATCCCTTTGTTTTCAGTTCTTATTTGTATATTTAACAGGACTGCTCCATTTCAGGTAATTCTAATTTTATAGGTTTGCTTTTCAGGTTTCTTTAGTGAATACTAAAGGAGAGAGCATAGTTAAGGATGCGAAGATCGTAGGTGTTGATCCAGCATATGATCT</genome_strand>
        <mrna_strand>AGCCATGGTGGTGTTGGGAGTTGTTTGTCCACAGCCACAGCATATCGTTGTTTCAATTCGAACCCAAATTCCTCCAATTTCTACACAAACCCAATATTGTACAAGGCGTAAAGCTTTGATATTTACTTCTTCTATGATTTCCTCTTTCATATATACATCTCATCACTCTCCTGCAACTGCTTTCCAAATCGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGATAAGTTTGGTCACATT...............................................................................................................................................................................................................................................................................................................GTAACCAATTACCATGTCATTACTAAATTAGCTACTGATAACATCGGACTGCAGCGTTGTAAG..............................................................................................................GTTTCTTTAGTGAATACTAAAGGAGAGAGCATAGTTAAGGATGCGAAGATCGTAGGTGTTGATCCAGCATATGATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E275602" ref_strand="+" ref_description="SGN-E275602 [cLEN-10-F16]">
      <seq>cgaaatgcctcaacaagaagaagacagactagttcacctctttcaggatacttccccttctgttgttttcattaaggaccttgagttggctaaaggctccaatgactctactaaggtgctagccgacgatgataatgcaaaagtggaagggacaggttcaggcttcatttgggataagtttggtcacattgtaaccaattaccatgtcattactaaattagctactgataacatcggactgcagcgttgtaaggtttctttagtgaatactaaaggagagagcatagttaaggatgcgaagatcgtaggtgttgatccagcatatgatctggccgttctcaaggttgatgttgaaggtgttgaagttaaaccagtctctgttggtacctctcgcggcctacgtgtaggtcaaagttgttttgccattggaaatccctatggatttgaaaacactctcacaactggggtagtacatttctacagtttatttataagttaagaaatatacccgtgtggagactcattttatggtttcatttccaggaaaaagtgtttttagcgtttatttttcatgcatttctgttcaacttactcagtatataacttgtaaatcttcatttcctttggagtatgcttaatgttttcatttctattgaacgggagctctctccttttactgtatatagtttttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="+" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="69994" stop="73429"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70294" g_stop="70339" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70340" i_stop="70938" i_length="599">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70939" g_stop="71082" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="190" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71083" i_stop="71385" i_length="303">
            <donor d_prob="0.351" d_score="1.00"/>
            <acceptor a_prob="0.823" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71386" g_stop="71448" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="253" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71449" i_stop="71558" i_length="110">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="71559" g_stop="71648" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="343" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="71649" i_stop="72779" i_length="1131">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="72780" g_stop="73129" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="693" r_length="350" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="+" ref_id="SGN-E275602" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E275602" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70294" e_stop="70339"/>
          <exon e_start="70939" e_stop="71082"/>
          <exon e_start="71386" e_stop="71448"/>
          <exon e_start="71559" e_stop="71648"/>
          <exon e_start="72780" e_stop="73129"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAGGTATATAATTAATTCAATGGAAGAGGAAAACCCAATAATTGACTTGTTTGCCAAAATGTCTTCTAATTTCGTGGTCTATTTTTAAATTATTTGCTACTAGTGGAAAGTGAAGACTGAAAATTTAAGTAAGAAGCCATTAAATACTAACCCAACTTTGTGACTAAGGTATCTTCATAATATAATGTTGGAATTGAACTCTTGACAGTTGTGACTTGTAGGTTTACTTTGCAGTCGTTGTTAACAATCTTGTTGTATCTGAAAGACGTGGGTCTCATATTGATGTTACCGAATAGATGGTGCAGGAAAGAATGTGCACATTATTCTGAAGACCTTGTATTGGACAGATGACAGATATATTGAACAATATGATCCTCCTAAGCCATTTTGCACTAGTATGTTAGTCCACACAAGTCTAATATGGTTTAGTACCAGTAAAATGCCATACTTCAGACCTACGAGAAATTTAAATGTTTCTTGATCATCGAAAGATCTTTGCAACAACAATAAGACGAAAGTATCCTTTTTTGTATTATCATGTTTATTGATTAGTGAGTTTAGCTGTTTGAAATGTAGTAACAGAACTGATGATGCAAATGCAGGATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGATAAGTTTGGTCACATTGTACGATTGTTCGACTCTGTGGATTACAAATTTGCAATGAATATCCAAATTTTCTATGTTAATTGGATGAACTCTCTGCTTCTTATCTCAAGAAAGTTAAATGCTTGATATAAGACTTGAATTAAGATTCCATTGTTTTTTGTTTCCTGCCTCATATCTCGTTCAAATTTATGACCCTGCTTCAAATCTTGCTTCGGAAGTTTCTGTAAATTTGTTTTAGTACTGACCTAAAACAGTCACTTATAATTCTAAAATCAGACAGTTCGCTGAGCATGGGGCATGATTATTTTGGGTTAATCGCAGGTAACCAATTACCATGTCATTACTAAATTAGCTACTGATAACATCGGACTGCAGCGTTGTAAGGTTTTTCTGCATCCTTGTGTTTTATATCCCTTTGTTTTCAGTTCTTATTTGTATATTTAACAGGACTGCTCCATTTCAGGTAATTCTAATTTTATAGGTTTGCTTTTCAGGTTTCTTTAGTGAATACTAAAGGAGAGAGCATAGTTAAGGATGCGAAGATCGTAGGTGTTGATCCAGCATATGATCTGGCCGTTCTCAAGGTGTTAAACCGATATATTACTTAATAATGTTGTCAATTTCCATTATTTTTACTAATTTATTTTCTATACTGGTAGGTTTAGACTGGTAATTATAACTATCCAAATTTCTCCTTATAGATTGGTTAGTTGAAGTAACTATGACAAACAGAACATAATCTAACTCCTTCCATTCTATTTTATATGACAATATTTGAATGGCCACGGACATTGAGATATTAATTTTGGTTTATATATTATATTAGCTATTATGGAACAAAATACTAAAGTAATGGTTAAAGGTTTGATGGAGAATTCATCATATCAACGTGTTAAATTTGAATAATTAAACGAATTTGAGCCATTGAATTGTGAAAGTTGTGTGGAAATGGGATGGTATAAAATGTTTGAAATGTTTAAAACTGGCAAGATTTTCATATAACTTAGAAAGATGGTACTTCTACGTTCGGAATAGAGACGCAGAGTCATCATCAACCTATTCTTGTGAAATTATTGGGGATAATTTGATACGAATTTTAAACACGTAGCTAAAAAAAGCATCTATTTGCCTGTCCCAGGAAATTATATACAAGGTCTTCTATTTTCAGTCTATATATGAGGAATCGTCATGAGTTAGCAAGTTTTGCATCTGCTGCCAGCATGTTGCAACCCCTCCTCCCTTATCTGAGTTTAGGACTGGCAATATTAGCAAGCTCACACAGACGAAGTTAGTATGTTGATTTTGAACGTATTGCTTTCCAAGTATGATTTTGACCTTTATTATTATTCACTTATATATATAACTTATTTTCACTTTTATTTCCTTTTTCGAATGATGCTGACATGAGTTAGATTTTAAATGAGGAGATATGGTCACTGAGGTCTGAGGATTCATATAGCCAACCCTGATTAGTTTGGACTTAGGGGTTGTTTGTTGTTGTCATACAGTTCCAACACACCCTCACACTCCAAAATCTCAATTGTTATCTGTCATTGCTTCTCTCCTTTTAACAAAAAAAGCAATTTTATAGAGACAAGTGAAAACACTTGGATTAGATCTGATGAAAATGAAATGTTAAAAGACAATGACTATTAAATATGAAGAAAAAAATTTGTTCAAAATAAAGTTGTCTAACATTTGATATCTCACTGCAGGTTGATGTTGAAGGTGTTGAAGTTAAACCAGTCTCTGTTGGTACCTCTCGCGGCCTACGTGTAGGTCAAAGTTGTTTTGCCATTGGAAATCCCTATGGATTTGAAAACACTCTCACAACTGGGGTAGTACATTTCTACAGTTTATTTATAAGTTAAGAAATATACCCGTGTGGAGACTCATTTTATGGTTTCATTTCCAGGAAAAAGTGTTTTTAGCGTTTATTTTTCATGCATTTCTGTTCAACTTACTCAGTATATAACTTGTAAATCTTCATTTCCTTTGGAGTATGCTTAATGTTTTCATTTCTATTGAACGGGAGCTCTCTCCTTTTACTGTATATAGTTTTTAA</genome_strand>
        <mrna_strand>CGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGATAAGTTTGGTCACATT...............................................................................................................................................................................................................................................................................................................GTAACCAATTACCATGTCATTACTAAATTAGCTACTGATAACATCGGACTGCAGCGTTGTAAG..............................................................................................................GTTTCTTTAGTGAATACTAAAGGAGAGAGCATAGTTAAGGATGCGAAGATCGTAGGTGTTGATCCAGCATATGATCTGGCCGTTCTCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATGTTGAAGGTGTTGAAGTTAAACCAGTCTCTGTTGGTACCTCTCGCGGCCTACGTGTAGGTCAAAGTTGTTTTGCCATTGGAAATCCCTATGGATTTGAAAACACTCTCACAACTGGGGTAGTACATTTCTACAGTTTATTTATAAGTTAAGAAATATACCCGTGTGGAGACTCATTTTATGGTTTCATTTCCAGGAAAAAGTGTTTTTAGCGTTTATTTTTCATGCATTTCTGTTCAACTTACTCAGTATATAACTTGTAAATCTTCATTTCCTTTGGAGTATGCTTAATGTTTTCATTTCTATTGAACGGGAGCTCTCTCCTTTTACTGTATATAGTTTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E242241" ref_strand="+" ref_description="SGN-E242241 [cLED-37-D22]">
      <seq>ttgagttggctaaaggctccaatgactctactaaggtgctagccgacgatgataatgcaaaagtggaagggacaggttcaggcttcatttgggataagtttggtcacattgtaaccaattaccatgtcattactaaattagctactgataacatcggactgcagcgttgtaaggtttctttagtgaatactaaaggagagagcatagttaaggatgcgaagatcgtacgtgttgatccagcatatgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="+" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70673" stop="71934"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70973" g_stop="71082" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71083" i_stop="71385" i_length="303">
            <donor d_prob="0.351" d_score="1.00"/>
            <acceptor a_prob="0.823" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71386" g_stop="71448" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="173" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71449" i_stop="71558" i_length="110">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71559" g_stop="71634" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="249" r_length="76" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="+" ref_id="SGN-E242241" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>249</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E242241" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70973" e_stop="71082"/>
          <exon e_start="71386" e_stop="71448"/>
          <exon e_start="71559" e_stop="71634"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGATAAGTTTGGTCACATTGTACGATTGTTCGACTCTGTGGATTACAAATTTGCAATGAATATCCAAATTTTCTATGTTAATTGGATGAACTCTCTGCTTCTTATCTCAAGAAAGTTAAATGCTTGATATAAGACTTGAATTAAGATTCCATTGTTTTTTGTTTCCTGCCTCATATCTCGTTCAAATTTATGACCCTGCTTCAAATCTTGCTTCGGAAGTTTCTGTAAATTTGTTTTAGTACTGACCTAAAACAGTCACTTATAATTCTAAAATCAGACAGTTCGCTGAGCATGGGGCATGATTATTTTGGGTTAATCGCAGGTAACCAATTACCATGTCATTACTAAATTAGCTACTGATAACATCGGACTGCAGCGTTGTAAGGTTTTTCTGCATCCTTGTGTTTTATATCCCTTTGTTTTCAGTTCTTATTTGTATATTTAACAGGACTGCTCCATTTCAGGTAATTCTAATTTTATAGGTTTGCTTTTCAGGTTTCTTTAGTGAATACTAAAGGAGAGAGCATAGTTAAGGATGCGAAGATCGTAGGTGTTGATCCAGCATATGATC</genome_strand>
        <mrna_strand>TTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGATAAGTTTGGTCACATT...............................................................................................................................................................................................................................................................................................................GTAACCAATTACCATGTCATTACTAAATTAGCTACTGATAACATCGGACTGCAGCGTTGTAAG..............................................................................................................GTTTCTTTAGTGAATACTAAAGGAGAGAGCATAGTTAAGGATGCGAAGATCGTACGTGTTGATCCAGCATATGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E419661" ref_strand="-" ref_description="SGN-E419661 [STM-30-A19]">
      <seq>cacatattttggagcttcatttcttcgagaattttgcaaaattaaacttttatgcaaagggaagaggagttgatggtttaattgtttgtcttagcatatgctgtagctacaattacacaattgtacggcaaatttccttcattgatctaaactggactaaaatgagcaccaaggaactagagacatacctatctgaagttggaagctcaaatcagttagagacaaacaattcaaaatatgtctctcatgtcaagaagctactatatcgacgaatgctggttggtataagtgatggaagattctttctaggtacattttattgtattgataagcaaggaaacataattcttcaagatgcagtcgagtaccgtagcactagaagatctgccccttctccaatggaacagcgagttcttggtctcattttaatcccttccttatgccggaaaacatgtcatgtggattgttctattggcgaacagtttgtccctaatgtcgcttggggagcaaaagtcttaattattcgtggcgataaacttgatccaattggatgaacatcttccctgtttgattcatcgtgacaattgattatttcattttcaagtgtgaactttactggtgttatattatcatatgtttttctcttctaggaagaagctgatgagtctgtcatcgataaacttgtcattttctgctgcagtaatctctctaatgttccttaaaaaaaaagag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="-" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="78871" stop="76714"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77655" g_stop="76986" g_length="670"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="727" r_length="668" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="-" ref_id="SGN-E419661" ref_strand="-">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>670</cumulative_length_of_scored_exons>
        <coverage percentage="0.915" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E419661" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="77655" e_stop="76986"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGAGGAGTTTATGGTTTAGTTGTTTGTCTCTTAGCATATGCTGTAGCTACAATCACAGAATTGTACGG-AAAATTCCTTCATTGATCTAAACTGGACTAAAAATGAGCACCAAGGAACTAGAGACATACCTATCTGATGTTGGAAGCTCAAATCAGTTCGAGACAAACAGTTCAAAATATGTCTCTCATGTCAAGAAGTTACTATATCGACGAATGCTGGTTGGTATAAGTGATGGAAGGTTCTTTCTAGGTACATTTTATTGTATAGATAAGCAAGGAAACATAATTCTTCAAGATGCAGTCGAGTACCGTAGCACTAGAAGATCTGCCCCTTCTCCAATGGAACAGCGAGTTCTTGGTCTCATTTTAATCCCTTCTTCATGTCGGAAAACATGTCATGTGGATTGTTCTATTGACGAACAG-TTGTCACTAATGTCGCTTGGGGAGCAAAAGTCATAATTATTCGTGGCGATAAACTTGATCCAATTGGATGAACATCTTCCCTGTTTGATTTATCGTGACAATTGATTATTTCATTTTCAAGTGTGTACTTTACTGGTGTTATATTATCATATGTTTTTTCTCTTTTAGGAAGAAGCTGATGAGCCTGTCATCGATAAACTTGTTATTTTCTGTTGCATCCCTCTCTCTAGTGTTCCTTATCGATG</genome_strand>
        <mrna_strand>GGAAGAGGAGTTGATGGTTTAATTGTTTG--TCTTAGCATATGCTGTAGCTACAATTACACAATTGTACGGCAAATTTCCTTCATTGATCTAAACTGGACT-AAAATGAGCACCAAGGAACTAGAGACATACCTATCTGAAGTTGGAAGCTCAAATCAGTTAGAGACAAACAATTCAAAATATGTCTCTCATGTCAAGAAGCTACTATATCGACGAATGCTGGTTGGTATAAGTGATGGAAGATTCTTTCTAGGTACATTTTATTGTATTGATAAGCAAGGAAACATAATTCTTCAAGATGCAGTCGAGTACCGTAGCACTAGAAGATCTGCCCCTTCTCCAATGGAACAGCGAGTTCTTGGTCTCATTTTAATCCCTTCCTTATGCCGGAAAACATGTCATGTGGATTGTTCTATTGGCGAACAGTTTGTCCCTAATGTCGCTTGGGGAGCAAAAGTCTTAATTATTCGTGGCGATAAACTTGATCCAATTGGATGAACATCTTCCCTGTTTGATTCATCGTGACAATTGATTATTTCATTTTCAAGTGTGAACTTTACTGGTGTTATATTATCATATG-TTTTTCTCTTCTAGGAAGAAGCTGATGAGTCTGTCATCGATAAACTTGTCATTTTCTGCTGCAGTAATCTCTCTAATGTTCCTTAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E419758" ref_strand="+" ref_description="SGN-E419758 [STM-30-M7]">
      <seq>cacctcaaaatgaaggaacattagagagaggtacccagcagaaaatgacaagtttatcgatgacagactcatcagcttcttcctagaagagaaaaacatatgataatataacaccagtaaagttcacacttgaaaatgaaataatcaattgtcacgatgaatcaaacagggaagatgttcatccaattggatcaagtttatcgccacgaataattaagacttttgctccccaagcgacattagggacaactgttcgccaataaaacaatccacatgacatgttttccggcataaggaagggattaaaatgagaccaagaactcgctgttccattggagaaggggcagatcttctagtgctacggtactcgactgcatcttgaagaattatgtttccttgcttatcaatacaataaaatgtacctagaaagaatcttccatcacttataccaaccagcattcgtcgatatagtagcttcttgacatgagagacatattttgaaattgtttgtctctaactgatttgagcttccaactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="+" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="76691" stop="77817"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76996" g_stop="77517" g_length="522"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="537" r_length="522" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="+" ref_id="SGN-E419758" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>522</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E419758" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76996" e_stop="77517"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACACTAGAGAGAGGGATGCAACAGAAAATAACAAGTTTATCGATGACAGGCTCATCAGCTTCTTCCTAAAAGAGAAAAAACATATGATAATATAACACCAGTAAAGTACACACTTGAAAATGAAATAATCAATTGTCACGATAAATCAAACAGGGAAGATGTTCATCCAATTGGATCAAGTTTATCGCCACGAATAATTATGACTTTTGCTCCCCAAGCGACATTAGTGACAACTGTTCGTCAATAGAACAATCCACATGACATGTTTTCCGACATGAAGAAGGGATTAAAATGAGACCAAGAACTCGCTGTTCCATTGGAGAAGGGGCAGATCTTCTAGTGCTACGGTACTCGACTGCATCTTGAAGAATTATGTTTCCTTGCTTATCTATACAATAAAATGTACCTAGAAAGAACCTTCCATCACTTATACCAACCAGCATTCGTCGATATAGTAACTTCTTGACATGAGAGACATATTTTG-AACTGTTTGTCTCGAACTGATTTGAGCTTCCAACAT</genome_strand>
        <mrna_strand>GAACATTAGAGAGAGGTACCCAGCAGAAAATGACAAGTTTATCGATGACAGACTCATCAGCTTCTTCCTAGAAGAG-AAAAACATATGATAATATAACACCAGTAAAGTTCACACTTGAAAATGAAATAATCAATTGTCACGATGAATCAAACAGGGAAGATGTTCATCCAATTGGATCAAGTTTATCGCCACGAATAATTAAGACTTTTGCTCCCCAAGCGACATTAGGGACAACTGTTCGCCAATAAAACAATCCACATGACATGTTTTCCGGCATAAGGAAGGGATTAAAATGAGACCAAGAACTCGCTGTTCCATTGGAGAAGGGGCAGATCTTCTAGTGCTACGGTACTCGACTGCATCTTGAAGAATTATGTTTCCTTGCTTATCAATACAATAAAATGTACCTAGAAAGAATCTTCCATCACTTATACCAACCAGCATTCGTCGATATAGTAGCTTCTTGACATGAGAGACATATTTTGAAATTGTTTGTCTCTAACTGATTTGAGCTTCCAACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E419660" ref_strand="+" ref_description="SGN-E419660 [STM-30-A19]">
      <seq>gggttctgcacatattttggagcttcatttcttcgagaattttgcaaaattaaacttttatgcaaagggaagaggagttgatggtttaattgtttgtcttagcatatgctgtagctacaattacacaattgtacggcaaatttccttcattgatctaaactggactaaaatgagcaccaaggaactagagacatacctatctgaagttggaagctcaaatcagttagagacaaacaattcaaaatatgtctctcatgtcaagaagctactatatcgacgaatgctggttggtataagtgatggaagattctttctaggtacattttattgtattgataagcaaggaaacataattcttcaagatgcagtcgagtaccgtagcactagaagatctgccccttctccaatggaacagcgagttcttggtctcattttaatcccttccttatgccggaaaacatgtcatgtggattgttctattggcgaacagttgtccctaatgtcgcttggggagcaaaagtcttaattattcgtggcgataaacttgatccaattggatgaacatcttccctgtttgattcatcgtgacaattgattatttcattttcaagtgtgaactttactggtggtatattatcatatgtttttctcttctaagaaagagctgatgagtctgtcatcgataaacttgtcattttctgctgcattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="-" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="78871" stop="76713"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77655" g_stop="77011" g_length="645"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="709" r_length="642" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="-" ref_id="SGN-E419660" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>645</cumulative_length_of_scored_exons>
        <coverage percentage="0.910" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E419660" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77655" e_stop="77011"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGAGGAGTTTATGGTTTAGTTGTTTGTCTCTTAGCATATGCTGTAGCTACAATCACAGAATTGTACGG-AAAATTCCTTCATTGATCTAAACTGGACTAAAAATGAGCACCAAGGAACTAGAGACATACCTATCTGATGTTGGAAGCTCAAATCAGTTCGAGACAAACAGTTCAAAATATGTCTCTCATGTCAAGAAGTTACTATATCGACGAATGCTGGTTGGTATAAGTGATGGAAGGTTCTTTCTAGGTACATTTTATTGTATAGATAAGCAAGGAAACATAATTCTTCAAGATGCAGTCGAGTACCGTAGCACTAGAAGATCTGCCCCTTCTCCAATGGAACAGCGAGTTCTTGGTCTCATTTTAATCCCTTCTTCATGTCGGAAAACATGTCATGTGGATTGTTCTATTGACGAACAGTTGTCACTAATGTCGCTTGGGGAGCAAAAGTCATAATTATTCGTGGCGATAAACTTGATCCAATTGGATGAACATCTTCCCTGTTTGATTTATCGTGACAATTGATTATTTCATTTTCAAGTGTGTACTTTACTGGTGTTATATTATCATATGTTTTTTCTCTTTTAGGAAGAAGCTGATGAGCCTGTCATCGATAAACTTGTTATTTTCTGTTGCATCC</genome_strand>
        <mrna_strand>GGAAGAGGAGTTGATGGTTTAATTGTTTG--TCTTAGCATATGCTGTAGCTACAATTACACAATTGTACGGCAAATTTCCTTCATTGATCTAAACTGGACT-AAAATGAGCACCAAGGAACTAGAGACATACCTATCTGAAGTTGGAAGCTCAAATCAGTTAGAGACAAACAATTCAAAATATGTCTCTCATGTCAAGAAGCTACTATATCGACGAATGCTGGTTGGTATAAGTGATGGAAGATTCTTTCTAGGTACATTTTATTGTATTGATAAGCAAGGAAACATAATTCTTCAAGATGCAGTCGAGTACCGTAGCACTAGAAGATCTGCCCCTTCTCCAATGGAACAGCGAGTTCTTGGTCTCATTTTAATCCCTTCCTTATGCCGGAAAACATGTCATGTGGATTGTTCTATTGGCGAACAGTTGTCCCTAATGTCGCTTGGGGAGCAAAAGTCTTAATTATTCGTGGCGATAAACTTGATCCAATTGGATGAACATCTTCCCTGTTTGATTCATCGTGACAATTGATTATTTCATTTTCAAGTGTGAACTTTACTGGTGGTATATTATCATATG-TTTTTCTCTTCTAAGAAAGAGCTGATGAGTCTGTCATCGATAAACTTGTCATTTTCTGCTGCATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E543323" ref_strand="+" ref_description="SGN-E543323 [TUS-65-B8](-)">
      <seq>tgttttaacagcgcattgtgaagtggaatacgatttgcgccgaaataccgaaacaaagtagaagcaagtgttgcacatattttttggagcttagtttctccagaattttgcaaaatttattcaaaagggaagaggagtttatggtttagttgtttgtctcttagcatatgctgtagctacaatcacagaattgtacggaaaattccttcattgatctaaactggactaaaaatgagccccaaggaactagagacatacctatctgatgttggaagctcaaatcagttcgagacaaacagttcaaaatatgtctctcatgtcaagaagttactatatcgacgaatgctggttggtataagtgatggaaggttctttctaggtacatttttttgtatagataagcaaggaaacataatttttcaagatgcagtcgagtaccgtagcactagaagatctgccccttttccaatggaacagcgagttcttggtctcattttaatcccttcttcatgtcggaaaacatgtcatgtggattgttctattgacgaacagttgtcactaatgtcgcttggggagcaaaagtcataatttttcggggcgataaacttgatccaattggatgaacatcttccctgtttgatttatcgtgacaattgattatttcattttcaagtgtgtactttacgggggttatattatcatatgttttttctcttttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="-" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="78946" stop="76757"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78646" g_stop="78520" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="127" r_length="127" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78519" i_stop="77656" i_length="864">
            <donor d_prob="0.597" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77655" g_stop="77057" g_length="599"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="726" r_length="599" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="727" polyA_stop="763"/>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="-" ref_id="SGN-E543323" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>726</cumulative_length_of_scored_exons>
        <coverage percentage="0.952" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E543323" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78646" e_stop="78520"/>
          <exon e_start="77655" e_stop="77057"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTATAACAGCGCATTGTGAAGTGGAATACGATTTGCGCCGAAATACCGAAACAAAGTAGAAGCAAGTGTTGCACATATTTTTTGGAGCTTAGTTTCTCCAGAATTTTGCAAAATTTATTCAAAAGGTACCCATGAAATTCTGCTCTTGCTAATAATTGAGGTATGGGGTTAGGGTTTTGAGATATATCGTTTTCTCTAATGCGTTTATTTAAGAATTTAATTGTCGGATTGTTAAAATAGATGGTTTGTGAAGAAGATGAGTTTAGTTTTTATGATATATCTGCTATATAAACCCCAAAAGTGAGTATCTTGACGCTTTATTCAATTCCATCCTTTTAACAGACAAATCTCAATTTCTGGCTGATTTTTATTTGAGTATAGCTTTATTCTTCATCATAATGACCACATTTCTCATCGTTATTTGCATTTTAGAGGGTTGGTGAGGGGTGTCGTATAGGGTCGCGAGGGTAGAGTGTACCTTACCCGGGTCGTGGCGTGTAGAGTATATGCAAATGTTACCCTACCTCTCGGAGGTAGAAAGAGTGTTTCTGTATACACTGAGTATATTGTAACGTGTCTAAATTGTGACTTTATAGTGATTGTTGTATTCAACATGTTGGATCTCTATGTTCTGCCCAAGAGTATGCCAATTCCTATATGGTGTGGAACTGAGTCTCTTACGGTGTTTTTTATTATAATATCCTTGTTCAAAGACTAAGAAGACTCTTCTTTTTCTTGTTCACACCTACACCCAAGATATCACAATTTTCTTGATTTTTTATATATACAGATTCATTTCTCGACTGCTATCGCTTGTTCTATTTTACTGCGGGCAGAGCAGAGGGGAGGAGAAATTAACGAAAGATCTTCTGTTTTAGAGTTTGCTTTGAATGCTTGCCCTTTAATGTATCATATATTGCCCAAGAGCGGTCTGGACACCACGGTTATCAAAATTTACCTGATTATTTCCCTGTCTTTACTTTCTGCAGGGAAGAGGAGTTTATGGTTTAGTTGTTTGTCTCTTAGCATATGCTGTAGCTACAATCACAGAATTGTACGGAAAATTCCTTCATTGATCTAAACTGGACTAAAAATGAGCACCAAGGAACTAGAGACATACCTATCTGATGTTGGAAGCTCAAATCAGTTCGAGACAAACAGTTCAAAATATGTCTCTCATGTCAAGAAGTTACTATATCGACGAATGCTGGTTGGTATAAGTGATGGAAGGTTCTTTCTAGGTACATTTTATTGTATAGATAAGCAAGGAAACATAATTCTTCAAGATGCAGTCGAGTACCGTAGCACTAGAAGATCTGCCCCTTCTCCAATGGAACAGCGAGTTCTTGGTCTCATTTTAATCCCTTCTTCATGTCGGAAAACATGTCATGTGGATTGTTCTATTGACGAACAGTTGTCACTAATGTCGCTTGGGGAGCAAAAGTCATAATTATTCGTGGCGATAAACTTGATCCAATTGGATGAACATCTTCCCTGTTTGATTTATCGTGACAATTGATTATTTCATTTTCAAGTGTGTACTTTACTGGTGTTATATTATCATATGTTTTTTCTCTTTTAGGAAGAA</genome_strand>
        <mrna_strand>TGTTTTAACAGCGCATTGTGAAGTGGAATACGATTTGCGCCGAAATACCGAAACAAAGTAGAAGCAAGTGTTGCACATATTTTTTGGAGCTTAGTTTCTCCAGAATTTTGCAAAATTTATTCAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAGAGGAGTTTATGGTTTAGTTGTTTGTCTCTTAGCATATGCTGTAGCTACAATCACAGAATTGTACGGAAAATTCCTTCATTGATCTAAACTGGACTAAAAATGAGCCCCAAGGAACTAGAGACATACCTATCTGATGTTGGAAGCTCAAATCAGTTCGAGACAAACAGTTCAAAATATGTCTCTCATGTCAAGAAGTTACTATATCGACGAATGCTGGTTGGTATAAGTGATGGAAGGTTCTTTCTAGGTACATTTTTTTGTATAGATAAGCAAGGAAACATAATTTTTCAAGATGCAGTCGAGTACCGTAGCACTAGAAGATCTGCCCCTTTTCCAATGGAACAGCGAGTTCTTGGTCTCATTTTAATCCCTTCTTCATGTCGGAAAACATGTCATGTGGATTGTTCTATTGACGAACAGTTGTCACTAATGTCGCTTGGGGAGCAAAAGTCATAATTTTTCGGGGCGATAAACTTGATCCAATTGGATGAACATCTTCCCTGTTTGATTTATCGTGACAATTGATTATTTCATTTTCAAGTGTGTACTTTACGGGGGTTATATTATCATATGTTTTTTCTCTTTTAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E543324" ref_strand="+" ref_description="SGN-E543324 [TUS-65-B8]">
      <seq>agaaaaaaaaaagaggcattgttataacagcgcattgtgaagtggaatacgatttgcgccgaaataccgaaacaaagtagaagcaagtgttgcacatattttttggagcttagtttctccagaattttgcaaaatttattcaaaagggaagaggagtttatggtttagttgtttgtctcttagcatatgctgtagctacaatcacagaattgtacggaaaattccttcattgatctaaactggactaaaaatgagcaccaaggaactagagacatacctatctgatgttggaagctcaaatcagttcgagacaaacagttcaaaatatgtctctcatgtcaagaagttactatatcgacgaatgctggttggtataagtgatggaaggttctttctaggtacattttattgtatagataagcaaggaaacataattcttcaagatgcagtcgagtaccgtagcactagaagatctgccccttctccaatggaacagcgagttcttggtctcattttaatcccttcttcatgtcggaaaacatgtcatgtggattgttctattgacgaacagttgtcactaatgtcgcttggggagcaaaagtcataattattcgtggcgataaacttgatccaattggatgaacatcttccctgtttgatttatcgtgacaattgattatttcattttcaagtgtgtactttactggggttatattatcatatgttttttctctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="-" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="78965" stop="76765"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78665" g_stop="78520" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="146" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78519" i_stop="77656" i_length="864">
            <donor d_prob="0.597" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77655" g_stop="77065" g_length="591"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="737" r_length="591" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="-" ref_id="SGN-E543324" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>737</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E543324" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78665" e_stop="78520"/>
          <exon e_start="77655" e_stop="77065"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAAAAAAAAGAGGCATTGTTATAACAGCGCATTGTGAAGTGGAATACGATTTGCGCCGAAATACCGAAACAAAGTAGAAGCAAGTGTTGCACATATTTTTTGGAGCTTAGTTTCTCCAGAATTTTGCAAAATTTATTCAAAAGGTACCCATGAAATTCTGCTCTTGCTAATAATTGAGGTATGGGGTTAGGGTTTTGAGATATATCGTTTTCTCTAATGCGTTTATTTAAGAATTTAATTGTCGGATTGTTAAAATAGATGGTTTGTGAAGAAGATGAGTTTAGTTTTTATGATATATCTGCTATATAAACCCCAAAAGTGAGTATCTTGACGCTTTATTCAATTCCATCCTTTTAACAGACAAATCTCAATTTCTGGCTGATTTTTATTTGAGTATAGCTTTATTCTTCATCATAATGACCACATTTCTCATCGTTATTTGCATTTTAGAGGGTTGGTGAGGGGTGTCGTATAGGGTCGCGAGGGTAGAGTGTACCTTACCCGGGTCGTGGCGTGTAGAGTATATGCAAATGTTACCCTACCTCTCGGAGGTAGAAAGAGTGTTTCTGTATACACTGAGTATATTGTAACGTGTCTAAATTGTGACTTTATAGTGATTGTTGTATTCAACATGTTGGATCTCTATGTTCTGCCCAAGAGTATGCCAATTCCTATATGGTGTGGAACTGAGTCTCTTACGGTGTTTTTTATTATAATATCCTTGTTCAAAGACTAAGAAGACTCTTCTTTTTCTTGTTCACACCTACACCCAAGATATCACAATTTTCTTGATTTTTTATATATACAGATTCATTTCTCGACTGCTATCGCTTGTTCTATTTTACTGCGGGCAGAGCAGAGGGGAGGAGAAATTAACGAAAGATCTTCTGTTTTAGAGTTTGCTTTGAATGCTTGCCCTTTAATGTATCATATATTGCCCAAGAGCGGTCTGGACACCACGGTTATCAAAATTTACCTGATTATTTCCCTGTCTTTACTTTCTGCAGGGAAGAGGAGTTTATGGTTTAGTTGTTTGTCTCTTAGCATATGCTGTAGCTACAATCACAGAATTGTACGGAAAATTCCTTCATTGATCTAAACTGGACTAAAAATGAGCACCAAGGAACTAGAGACATACCTATCTGATGTTGGAAGCTCAAATCAGTTCGAGACAAACAGTTCAAAATATGTCTCTCATGTCAAGAAGTTACTATATCGACGAATGCTGGTTGGTATAAGTGATGGAAGGTTCTTTCTAGGTACATTTTATTGTATAGATAAGCAAGGAAACATAATTCTTCAAGATGCAGTCGAGTACCGTAGCACTAGAAGATCTGCCCCTTCTCCAATGGAACAGCGAGTTCTTGGTCTCATTTTAATCCCTTCTTCATGTCGGAAAACATGTCATGTGGATTGTTCTATTGACGAACAGTTGTCACTAATGTCGCTTGGGGAGCAAAAGTCATAATTATTCGTGGCGATAAACTTGATCCAATTGGATGAACATCTTCCCTGTTTGATTTATCGTGACAATTGATTATTTCATTTTCAAGTGTGTACTTTACTGGTGTTATATTATCATATGTTTTTTCTCTTTT</genome_strand>
        <mrna_strand>AGAAAAAAAAAAGAGGCATTGTTATAACAGCGCATTGTGAAGTGGAATACGATTTGCGCCGAAATACCGAAACAAAGTAGAAGCAAGTGTTGCACATATTTTTTGGAGCTTAGTTTCTCCAGAATTTTGCAAAATTTATTCAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAGAGGAGTTTATGGTTTAGTTGTTTGTCTCTTAGCATATGCTGTAGCTACAATCACAGAATTGTACGGAAAATTCCTTCATTGATCTAAACTGGACTAAAAATGAGCACCAAGGAACTAGAGACATACCTATCTGATGTTGGAAGCTCAAATCAGTTCGAGACAAACAGTTCAAAATATGTCTCTCATGTCAAGAAGTTACTATATCGACGAATGCTGGTTGGTATAAGTGATGGAAGGTTCTTTCTAGGTACATTTTATTGTATAGATAAGCAAGGAAACATAATTCTTCAAGATGCAGTCGAGTACCGTAGCACTAGAAGATCTGCCCCTTCTCCAATGGAACAGCGAGTTCTTGGTCTCATTTTAATCCCTTCTTCATGTCGGAAAACATGTCATGTGGATTGTTCTATTGACGAACAGTTGTCACTAATGTCGCTTGGGGAGCAAAAGTCATAATTATTCGTGGCGATAAACTTGATCCAATTGGATGAACATCTTCCCTGTTTGATTTATCGTGACAATTGATTATTTCATTTTCAAGTGTGTACTTTACTGGGGTTATATTATCATATGTTTTTTCTCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E561239" ref_strand="+" ref_description="SGN-E561239 [17199]">
      <seq>ttctgcacatattttggagcttcatttcttcgagaattttgcaaaattaaacttttatgcaaagggaagaggagttgatggtttaattgtttgtcttagcatatgctgtagctacaattacacaattgtacggcaaatttccttcattgatctaaactggactaaaatgagcaccaaggaactagagacatacctatctgaagttggaagctcaaatcagttagagacaaacaattcaaaatatgtctctcatgtcaagaagctactatatcgacgaatgctggttggtataagtgatggaagattctttctaggtacattttattgtgattgataagcaaggaaacataattcttcaagatgcagtcgagtaccgtagcactagaagatctgccccttctccaatggaacagcgagttcttggtctcattttaatcccttccttatgccggaaaacatgtcatgtggattgttctattggcgaacagttgtccctaatgtcgcttggggagcaaaagtcttaattattcgtggcgataaacttgatccaattggatgaacatcttccctgtttgattcatcgtgacaattgattatttcattttcaagtgtgaactttactggtgttatattatcatatgtttttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="-" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="78871" stop="76771"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77655" g_stop="77069" g_length="587"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="649" r_length="585" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="-" ref_id="SGN-E561239" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="0.904" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E561239" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77655" e_stop="77069"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGAGGAGTTTATGGTTTAGTTGTTTGTCTCTTAGCATATGCTGTAGCTACAATCACAGAATTGTACGG-AAAATTCCTTCATTGATCTAAACTGGACTAAAAATGAGCACCAAGGAACTAGAGACATACCTATCTGATGTTGGAAGCTCAAATCAGTTCGAGACAAACAGTTCAAAATATGTCTCTCATGTCAAGAAGTTACTATATCGACGAATGCTGGTTGGTATAAGTGATGGAAGGTTCTTTCTAGGTACATTTTATTGT-ATAGATAAGCAAGGAAACATAATTCTTCAAGATGCAGTCGAGTACCGTAGCACTAGAAGATCTGCCCCTTCTCCAATGGAACAGCGAGTTCTTGGTCTCATTTTAATCCCTTCTTCATGTCGGAAAACATGTCATGTGGATTGTTCTATTGACGAACAGTTGTCACTAATGTCGCTTGGGGAGCAAAAGTCATAATTATTCGTGGCGATAAACTTGATCCAATTGGATGAACATCTTCCCTGTTTGATTTATCGTGACAATTGATTATTTCATTTTCAAGTGTGTACTTTACTGGTGTTATATTATCATATGTTTTTTCTC</genome_strand>
        <mrna_strand>GGAAGAGGAGTTGATGGTTTAATTGTTTG--TCTTAGCATATGCTGTAGCTACAATTACACAATTGTACGGCAAATTTCCTTCATTGATCTAAACTGGACT-AAAATGAGCACCAAGGAACTAGAGACATACCTATCTGAAGTTGGAAGCTCAAATCAGTTAGAGACAAACAATTCAAAATATGTCTCTCATGTCAAGAAGCTACTATATCGACGAATGCTGGTTGGTATAAGTGATGGAAGATTCTTTCTAGGTACATTTTATTGTGATTGATAAGCAAGGAAACATAATTCTTCAAGATGCAGTCGAGTACCGTAGCACTAGAAGATCTGCCCCTTCTCCAATGGAACAGCGAGTTCTTGGTCTCATTTTAATCCCTTCCTTATGCCGGAAAACATGTCATGTGGATTGTTCTATTGGCGAACAGTTGTCCCTAATGTCGCTTGGGGAGCAAAAGTCTTAATTATTCGTGGCGATAAACTTGATCCAATTGGATGAACATCTTCCCTGTTTGATTCATCGTGACAATTGATTATTTCATTTTCAAGTGTGAACTTTACTGGTGTTATATTATCATATG-TTTTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E303269" ref_strand="+" ref_description="SGN-E303269 [cLEX-5-L23]">
      <seq>gcgccgaaataccgaaacaaagatgaagcaagtgttgcacatatgttttggagcttaatttctgcagaattttgcaaaatttattcaaaagggaagaggaggtcatggtttagttgttggtctcttagcatatgctgtagctacaatcacagaattgtacggaaaattccttcattgatctaaactggactaaaaatgagctccaaggaactagagacatacctatctgatgttggaagctcaaatcaattcgagacaaacagttcaaaatatgtctctcatgtcaagaagttactatatcgacaaatgctgggtggtataagtgatggaaggatctttctaggtacatttgattgtatagataagcaaggaaacataattcttcaagatgcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="-" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="78910" stop="77053"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78610" g_stop="78520" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="0.945"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78519" i_stop="77656" i_length="864">
            <donor d_prob="0.597" d_score="0.94"/>
            <acceptor a_prob="0.968" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77655" g_stop="77353" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="394" r_length="303" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="-" ref_id="SGN-E303269" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>394</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E303269" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78610" e_stop="78520"/>
          <exon e_start="77655" e_stop="77353"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGCCGAAATACCGAAACAAAGTAGAAGCAAGTGTTGCACATATTTTTTGGAGCTTAGTTTCTCCAGAATTTTGCAAAATTTATTCAAAAGGTACCCATGAAATTCTGCTCTTGCTAATAATTGAGGTATGGGGTTAGGGTTTTGAGATATATCGTTTTCTCTAATGCGTTTATTTAAGAATTTAATTGTCGGATTGTTAAAATAGATGGTTTGTGAAGAAGATGAGTTTAGTTTTTATGATATATCTGCTATATAAACCCCAAAAGTGAGTATCTTGACGCTTTATTCAATTCCATCCTTTTAACAGACAAATCTCAATTTCTGGCTGATTTTTATTTGAGTATAGCTTTATTCTTCATCATAATGACCACATTTCTCATCGTTATTTGCATTTTAGAGGGTTGGTGAGGGGTGTCGTATAGGGTCGCGAGGGTAGAGTGTACCTTACCCGGGTCGTGGCGTGTAGAGTATATGCAAATGTTACCCTACCTCTCGGAGGTAGAAAGAGTGTTTCTGTATACACTGAGTATATTGTAACGTGTCTAAATTGTGACTTTATAGTGATTGTTGTATTCAACATGTTGGATCTCTATGTTCTGCCCAAGAGTATGCCAATTCCTATATGGTGTGGAACTGAGTCTCTTACGGTGTTTTTTATTATAATATCCTTGTTCAAAGACTAAGAAGACTCTTCTTTTTCTTGTTCACACCTACACCCAAGATATCACAATTTTCTTGATTTTTTATATATACAGATTCATTTCTCGACTGCTATCGCTTGTTCTATTTTACTGCGGGCAGAGCAGAGGGGAGGAGAAATTAACGAAAGATCTTCTGTTTTAGAGTTTGCTTTGAATGCTTGCCCTTTAATGTATCATATATTGCCCAAGAGCGGTCTGGACACCACGGTTATCAAAATTTACCTGATTATTTCCCTGTCTTTACTTTCTGCAGGGAAGAGGAGTTTATGGTTTAGTTGTTTGTCTCTTAGCATATGCTGTAGCTACAATCACAGAATTGTACGGAAAATTCCTTCATTGATCTAAACTGGACTAAAAATGAGCACCAAGGAACTAGAGACATACCTATCTGATGTTGGAAGCTCAAATCAGTTCGAGACAAACAGTTCAAAATATGTCTCTCATGTCAAGAAGTTACTATATCGACGAATGCTGGTTGGTATAAGTGATGGAAGGTTCTTTCTAGGTACATTTTATTGTATAGATAAGCAAGGAAACATAATTCTTCAAGATGCAG</genome_strand>
        <mrna_strand>GCGCCGAAATACCGAAACAAAGATGAAGCAAGTGTTGCACATATGTTTTGGAGCTTAATTTCTGCAGAATTTTGCAAAATTTATTCAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAGAGGAGGTCATGGTTTAGTTGTTGGTCTCTTAGCATATGCTGTAGCTACAATCACAGAATTGTACGGAAAATTCCTTCATTGATCTAAACTGGACTAAAAATGAGCTCCAAGGAACTAGAGACATACCTATCTGATGTTGGAAGCTCAAATCAATTCGAGACAAACAGTTCAAAATATGTCTCTCATGTCAAGAAGTTACTATATCGACAAATGCTGGGTGGTATAAGTGATGGAAGGATCTTTCTAGGTACATTTGATTGTATAGATAAGCAAGGAAACATAATTCTTCAAGATGCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E578130" ref_strand="+" ref_description="SGN-E578130 [LE08EE08]">
      <seq>cttggagggaccctaacatttgaccccaaaactgtcaaattgacaatggtagtctacgaaccaaacgatgagtcgtgatgggtaaacggaccatcgatggctgtggtacttagaaattttgttaaatggattccaaaaccagtctctgtcgcaaacgacaaagtgcactacggggtcgttaatggagtgacgggccatagacgagcaaccatcgtttggagggcgattttactgttaagttttagttaggatgggttaataagatttttatttaattaattagtttatggttaaggggtggttaattaagttatttgggggaatatataagggctaaacttcattaaactaatctaacaccccacaattccagaccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0015I15-DbQBf/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0015I15.1" temp_strand="-" temp_description="C06HBa0015I15.1  AC216643.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0015I15 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="144666" stop="143690"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="144366" g_stop="143990" g_length="377"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="377" r_length="377" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0015I15.1" gen_strand="-" ref_id="SGN-E578130" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>377</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0015I15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E578130" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="144366" e_stop="143990"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGGAGGGACCCTAACATTTGACCCCAAAACTGTCAAATTGACAATGGTAGTCTACGAACCAAACGATGAGTCGTGATGGGTAAACGGACCATCGATGGCTGTGGTACTTAGAAATTTTGTTAAATGGATTCCAAAACCAGTCTCTGTCGCAAACGACAAAGTGCACTACGGGGTCGTTAATGGAGTGACGGGCCATAGACGAGCAACCATCGTTTGGAGGGCGATTTTACTGTTAAGTTTTAGTTAGGATGGGTTAATAAGATTTTTATTTAATTAATTAGTTTATGGTTAAGGGGTGGTTAATTAAGTTATTTGGGGGAATATATAAGGGCTAAACTTCATTAAACTAATCTAACACCCCACAATTCCAGACCC</genome_strand>
        <mrna_strand>CTTGGAGGGACCCTAACATTTGACCCCAAAACTGTCAAATTGACAATGGTAGTCTACGAACCAAACGATGAGTCGTGATGGGTAAACGGACCATCGATGGCTGTGGTACTTAGAAATTTTGTTAAATGGATTCCAAAACCAGTCTCTGTCGCAAACGACAAAGTGCACTACGGGGTCGTTAATGGAGTGACGGGCCATAGACGAGCAACCATCGTTTGGAGGGCGATTTTACTGTTAAGTTTTAGTTAGGATGGGTTAATAAGATTTTTATTTAATTAATTAGTTTATGGTTAAGGGGTGGTTAATTAAGTTATTTGGGGGAATATATAAGGGCTAAACTTCATTAAACTAATCTAACACCCCACAATTCCAGACCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>23</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="15847" PGL_stop="15517"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15847" e_stop="15517"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.937"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.937">
            <gDNA_exon_boundary e_start="15847" e_stop="15517" e_length="331"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15847" stop="15517"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352716" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATCTGTCCCAGGCTTGGCTAACGTCACAATTTTAGCATTACAATCAAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCGAAGTCAACCATTTCTAAGATAACCAAGTCTACATGAGTATTGCTCCCCACAAAAGTCACAAGACAAGACCTATTCACCTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCACAATGTAAATTAAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCGAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAA</gDNA_template>
            <first_frame> D  L  S  Q  A  W  L  T  S  Q  F  *  H  Y  N  Q  R  L  Q  N  L  E  K  A  K  S  Y  P  E  L  H  R  S  Q  P  F  L  R  *  P  S  L  H  E  Y  C  S  P  Q  K  S  Q  D  K  T  Y  S  P  F  Q  L  S  Q  T  H  P  P  E  *  K  H  E  *  A  C  Q  A  I  H  N  V  N  *  D  H  *  Q  M  R  K  I  H  K  K  M  W  I  E  D  Q  T  I  Q  K  P  C  N  H  K  P  </first_frame>
            <second_frame>  I  C  P  R  L  G  *  R  H  N  F  S  I  T  I  K  D  C  K  I  W  R  K  P  S  H  T  Q  N  Y  I  E  V  N  H  F  *  D  N  Q  V  Y  M  S  I  A  P  H  K  S  H  K  T  R  P  I  H  L  F  N  Y  H  R  L  T  H  R  S  R  N  T  N  R  H  V  K  Q  F  T  M  *  I  K  T  I  S  K  *  G  R  Y  I  R  K  C  G  S  R  I  K  Q  Y  R  S  H  A  I  T  N  Q </second_frame>
            <third_frame>   S  V  P  G  L  A  N  V  T  I  L  A  L  Q  S  K  I  A  K  F  G  E  S  Q  V  I  P  R  I  T  S  K  S  T  I  S  K  I  T  K  S  T  *  V  L  L  P  T  K  V  T  R  Q  D  L  F  T  F  S  T  I  T  D  S  P  T  G  V  E  T  R  I  G  M  S  S  N  S  Q  C  K  L  R  P  L  A  N  E  E  D  T  *  E  N  V  D  R  G  S  N  N  T  E  A  M  Q  S  Q  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0015I15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="15547" PGL_stop="16206"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15547" e_stop="16206"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.908"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.908">
            <gDNA_exon_boundary e_start="15547" e_stop="16206" e_length="660"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15547" stop="16206"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352117" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTGATCCTCGATCCACATTTTCTTATGTATCTTCCTCATTTGCTAATGGTCTTAATTTACATTGTGAATTGCTTGACATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGATAGTTGAAAAGGTGAATAGGTCTTGTCTTGTGACTTTTGTGGGGAGCAATACTCATGTAGACTTGGTTATCTTAGAAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTTGATTGTAATGCTAAAATTGTGACGTTAGCCAAGCCTGGGACAGATCCATTAGTATGGGAGGGTGACTACACTTCCACTCCAGTTCGTATTATCTCCTTTCTTCGTGCTAAGAGAATGATTAGTAAGGGTTGTTTCGCTATCTTGGCACACCTCAAGGACGATACTACCCAAGTACCTTCAATGGAGTCTGTTTCGATAGTCCGTGAGTTTCTGGATGCGTTTCCTGCAGACCTTCCTGGTATGCCACCGGATAGAGATATTGACTTCTACATCGATCTTGAACCGGTACTCGCCCTATTTCTATACCCCCTTATAGAATGGCTCCCGCTTAGTTAAGGGAGTTAAAGGCCCAACTTCAAGAGTTGTTGAGCAAAGGCGTCATTAGACCAAGTGCATCCCCTTGGG</gDNA_template>
            <first_frame> F  D  P  R  S  T  F  S  Y  V  S  S  S  F  A  N  G  L  N  L  H  C  E  L  L  D  M  P  I  R  V  S  T  P  V  G  E  S  V  I  V  E  K  V  N  R  S  C  L  V  T  F  V  G  S  N  T  H  V  D  L  V  I  L  E  M  V  D  F  D  V  I  L  G  M  T  W  L  S  P  N  F  A  I  F  D  C  N  A  K  I  V  T  L  A  K  P  G  T  D  P  L  V  W  E  G  D  Y  T  S  T  P  V  R  I  I  S  F  L  R  A  K  R  M  I  S  K  G  C  F  A  I  L  A  H  L  K  D  D  T  T  Q  V  P  S  M  E  S  V  S  I  V  R  E  F  L  D  A  F  P  A  D  L  P  G  M  P  P  D  R  D  I  D  F  Y  I  D  L  E  P  V  L  A  L  F  L  Y  P  L  I  E  W  L  P  L  S  *  G  S  *  R  P  N  F  K  S  C  *  A  K  A  S  L  D  Q  V  H  P  L  G </first_frame>
            <second_frame>  L  I  L  D  P  H  F  L  M  Y  L  P  H  L  L  M  V  L  I  Y  I  V  N  C  L  T  C  L  F  V  F  L  L  R  W  V  S  L  *  *  L  K  R  *  I  G  L  V  L  *  L  L  W  G  A  I  L  M  *  T  W  L  S  *  K  W  L  T  S  M  *  F  W  V  *  L  G  F  L  Q  I  L  Q  S  L  I  V  M  L  K  L  *  R  *  P  S  L  G  Q  I  H  *  Y  G  R  V  T  T  L  P  L  Q  F  V  L  S  P  F  F  V  L  R  E  *  L  V  R  V  V  S  L  S  W  H  T  S  R  T  I  L  P  K  Y  L  Q  W  S  L  F  R  *  S  V  S  F  W  M  R  F  L  Q  T  F  L  V  C  H  R  I  E  I  L  T  S  T  S  I  L  N  R  Y  S  P  Y  F  Y  T  P  L  *  N  G  S  R  L  V  K  G  V  K  G  P  T  S  R  V  V  E  Q  R  R  H  *  T  K  C  I  P  L   </second_frame>
            <third_frame>   *  S  S  I  H  I  F  L  C  I  F  L  I  C  *  W  S  *  F  T  L  *  I  A  *  H  A  Y  S  C  F  Y  S  G  G  *  V  C  D  S  *  K  G  E  *  V  L  S  C  D  F  C  G  E  Q  Y  S  C  R  L  G  Y  L  R  N  G  *  L  R  C  N  S  G  Y  D  L  A  F  S  K  F  C  N  L  *  L  *  C  *  N  C  D  V  S  Q  A  W  D  R  S  I  S  M  G  G  *  L  H  F  H  S  S  S  Y  Y  L  L  S  S  C  *  E  N  D  *  *  G  L  F  R  Y  L  G  T  P  Q  G  R  Y  Y  P  S  T  F  N  G  V  C  F  D  S  P  *  V  S  G  C  V  S  C  R  P  S  W  Y  A  T  G  *  R  Y  *  L  L  H  R  S  *  T  G  T  R  P  I  S  I  P  P  Y  R  M  A  P  A  *  L  R  E  L  K  A  Q  L  Q  E  L  L  S  K  G  V  I  R  P  S  A  S  P  W  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0015I15.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15547" stop="16137"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>588</number_coding_nucleotides>
                  <number_encoded_amino_acids>196</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FDPRSTFSYVSSSFANGLNLHCELLDMPIRVSTPVGESVIVEKVNRSCLVTFVGSNTHVDLVILEMVDFDVILGMTWLSPNFAIFDCNAKIVTLAKPGTDPLVWEGDYTSTPVRIISFLRAKRMISKGCFAILAHLKDDTTQVPSMESVSIVREFLDAFPADLPGMPPDRDIDFYIDLEPVLALFLYPLIEWLPLS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="18314" PGL_stop="18138"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="18314" e_stop="18138"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.921"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.921">
            <gDNA_exon_boundary e_start="18314" e_stop="18138" e_length="177"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18314" stop="18138"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577888" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTACATCTCCTCCCATACAATGCTTCGAAAGGAGTCATATCAATACTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAAGAAGTTATCCCAATGACCACCAAAGTGTATCACACATGCACGAAGCATATCATCCAACACTTGAATTGTTCGCTCAGACTGACCATCG</gDNA_template>
            <first_frame> L  H  L  L  P  Y  N  A  S  K  G  V  I  S  I  L  E  *  *  L  L  L  Y  E  N  S  A  K  G  K  K  L  S  Q  *  P  P  K  C  I  T  H  A  R  S  I  S  S  N  T  *  I  V  R  S  D  *  P  S </first_frame>
            <second_frame>  Y  I  S  S  H  T  M  L  R  K  E  S  Y  Q  Y  L  S  D  S  Y  Y  C  M  K  T  P  L  R  V  R  S  Y  P  N  D  H  Q  S  V  S  H  M  H  E  A  Y  H  P  T  L  E  L  F  A  Q  T  D  H   </second_frame>
            <third_frame>   T  S  P  P  I  Q  C  F  E  R  S  H  I  N  T  *  V  I  A  I  I  V  *  K  L  R  *  G  *  E  V  I  P  M  T  T  K  V  Y  H  T  C  T  K  H  I  I  Q  H  L  N  C  S  L  R  L  T  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0015I15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="36130" PGL_stop="36749"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36130" e_stop="36749"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.903"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.903">
            <gDNA_exon_boundary e_start="36130" e_stop="36749" e_length="620"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36130" stop="36749"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E554940" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTTCCTTTGGCACTTGGAGAAATATTTCAAGTGTATGCGGGTCCGTAGTGATGTGAACAAGATCAACACGGCTGTGTTGTATCTTTCAGAGTTGGCCATGCTATGGTGGAAACGTAAAGAGTCTGATATCGCAAAGGGGACGTGCGCGTTGAACAAATGGGAGCAGTTCCATGTGGAGTTCAAGAAGGCGTTCCTCCCTAGCAACGTCGTCTATGAGGCAAAGCGCAAGATGCGGGAGTTGAGACAAAAGGGCAGCATACGCGCGTATGTGCGGGAGTTTACCACCCTTACATTTCAGATTCCTGACCTCAAGGACGACGACACATTGTTCTACTTCATGGATGGGCTGAAAAATTGGGCCAGAACGGAGTTGGAACGGCGGCAAGTCAGGACTATAGACGATGCCATCACGCAGGCTGAAGCCTTGACAGACTTCAGGCGAGAGAAGTCTATTAGTGCAGAGGAGGACGACGAGGTAGGCAGTCATGATGATAGTGGGGATGACGGTGGCGAAGGCTAGGAGCAAACGCCACAACCCAAAAGGCGTGACACCTACGGGTCCAGCGGCAAGAAGCCCAGAGATCGTGGAAACACGGTACGGGATTCCAAGGATGGTTG</gDNA_template>
            <first_frame> N  F  L  W  H  L  E  K  Y  F  K  C  M  R  V  R  S  D  V  N  K  I  N  T  A  V  L  Y  L  S  E  L  A  M  L  W  W  K  R  K  E  S  D  I  A  K  G  T  C  A  L  N  K  W  E  Q  F  H  V  E  F  K  K  A  F  L  P  S  N  V  V  Y  E  A  K  R  K  M  R  E  L  R  Q  K  G  S  I  R  A  Y  V  R  E  F  T  T  L  T  F  Q  I  P  D  L  K  D  D  D  T  L  F  Y  F  M  D  G  L  K  N  W  A  R  T  E  L  E  R  R  Q  V  R  T  I  D  D  A  I  T  Q  A  E  A  L  T  D  F  R  R  E  K  S  I  S  A  E  E  D  D  E  V  G  S  H  D  D  S  G  D  D  G  G  E  G  *  E  Q  T  P  Q  P  K  R  R  D  T  Y  G  S  S  G  K  K  P  R  D  R  G  N  T  V  R  D  S  K  D  G   </first_frame>
            <second_frame>  I  S  F  G  T  W  R  N  I  S  S  V  C  G  S  V  V  M  *  T  R  S  T  R  L  C  C  I  F  Q  S  W  P  C  Y  G  G  N  V  K  S  L  I  S  Q  R  G  R  A  R  *  T  N  G  S  S  S  M  W  S  S  R  R  R  S  S  L  A  T  S  S  M  R  Q  S  A  R  C  G  S  *  D  K  R  A  A  Y  A  R  M  C  G  S  L  P  P  L  H  F  R  F  L  T  S  R  T  T  T  H  C  S  T  S  W  M  G  *  K  I  G  P  E  R  S  W  N  G  G  K  S  G  L  *  T  M  P  S  R  R  L  K  P  *  Q  T  S  G  E  R  S  L  L  V  Q  R  R  T  T  R  *  A  V  M  M  I  V  G  M  T  V  A  K  A  R  S  K  R  H  N  P  K  G  V  T  P  T  G  P  A  A  R  S  P  E  I  V  E  T  R  Y  G  I  P  R  M  V  </second_frame>
            <third_frame>   F  P  L  A  L  G  E  I  F  Q  V  Y  A  G  P  *  *  C  E  Q  D  Q  H  G  C  V  V  S  F  R  V  G  H  A  M  V  E  T  *  R  V  *  Y  R  K  G  D  V  R  V  E  Q  M  G  A  V  P  C  G  V  Q  E  G  V  P  P  *  Q  R  R  L  *  G  K  A  Q  D  A  G  V  E  T  K  G  Q  H  T  R  V  C  A  G  V  Y  H  P  Y  I  S  D  S  *  P  Q  G  R  R  H  I  V  L  L  H  G  W  A  E  K  L  G  Q  N  G  V  G  T  A  A  S  Q  D  Y  R  R  C  H  H  A  G  *  S  L  D  R  L  Q  A  R  E  V  Y  *  C  R  G  G  R  R  G  R  Q  S  *  *  *  W  G  *  R  W  R  R  L  G  A  N  A  T  T  Q  K  A  *  H  L  R  V  Q  R  Q  E  A  Q  R  S  W  K  H  G  T  G  F  Q  G  W  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0015I15.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36130" stop="36651"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>519</number_coding_nucleotides>
                  <number_encoded_amino_acids>173</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NFLWHLEKYFKCMRVRSDVNKINTAVLYLSELAMLWWKRKESDIAKGTCALNKWEQFHVEFKKAFLPSNVVYEAKRKMRELRQKGSIRAYVREFTTLTFQIPDLKDDDTLFYFMDGLKNWARTELERRQVRTIDDAITQAEALTDFRREKSISAEEDDEVGSHDDSGDDGGEG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="70028" PGL_stop="73468"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70028" e_stop="70339"/>
            <exon e_start="70939" e_stop="71082"/>
            <exon e_start="71386" e_stop="71448"/>
            <exon e_start="71559" e_stop="71648"/>
            <exon e_start="72780" e_stop="72902"/>
            <exon e_start="73385" e_stop="73468"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.945" acc_prob="0.773" e_score="1.000"/>
          <exon-intron don_prob="0.351" acc_prob="0.823" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.874" acc_prob="0.999" e_score="0.992"/>
          <exon-only e_score="0.976"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="70028" e_stop="70339" e_length="312"/>
          </exon>
          <intron i_serial="1" don_prob="0.945" acc_prob="0.773">
            <gDNA_intron_boundary i_start="70340" i_stop="70938" i_length="599"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="70939" e_stop="71082" e_length="144"/>
          </exon>
          <intron i_serial="2" don_prob="0.351" acc_prob="0.823">
            <gDNA_intron_boundary i_start="71083" i_stop="71385" i_length="303"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="71386" e_stop="71448" e_length="63"/>
          </exon>
          <intron i_serial="3" don_prob="0.967" acc_prob="0.987">
            <gDNA_intron_boundary i_start="71449" i_stop="71558" i_length="110"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="71559" e_stop="71648" e_length="90"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="71649" i_stop="72779" i_length="1131"/>
          </intron>
          <exon e_serial="5" e_score="0.992">
            <gDNA_exon_boundary e_start="72780" e_stop="72902" e_length="123"/>
          </exon>
          <intron i_serial="5" don_prob="0.874" acc_prob="0.999">
            <gDNA_intron_boundary i_start="72903" i_stop="73384" i_length="482"/>
          </intron>
          <exon e_serial="6" e_score="0.976">
            <gDNA_exon_boundary e_start="73385" e_stop="73468" e_length="84"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70028" stop="70339"/>
              <exon start="70939" stop="71082"/>
              <exon start="71386" stop="71448"/>
              <exon start="71559" stop="71648"/>
              <exon start="72780" stop="72902"/>
              <exon start="73385" stop="73468"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260624" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70028" stop="70339"/>
              <exon start="70939" stop="71082"/>
              <exon start="71386" stop="71448"/>
              <exon start="71559" stop="71648"/>
              <exon start="72780" stop="72902"/>
              <exon start="73385" stop="73415"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264026" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70028" stop="70339"/>
              <exon start="70939" stop="71082"/>
              <exon start="71386" stop="71429"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260141" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70028" stop="70339"/>
              <exon start="70939" stop="71064"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264150" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70070" stop="70339"/>
              <exon start="70939" stop="71082"/>
              <exon start="71386" stop="71448"/>
              <exon start="71559" stop="71576"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252830" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70090" stop="70339"/>
              <exon start="70939" stop="71082"/>
              <exon start="71386" stop="71448"/>
              <exon start="71559" stop="71635"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245506" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70105" stop="70339"/>
              <exon start="70939" stop="71082"/>
              <exon start="71386" stop="71448"/>
              <exon start="71559" stop="71635"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251788" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70973" stop="71082"/>
              <exon start="71386" stop="71448"/>
              <exon start="71559" stop="71634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242241" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAAACTGAGCTCTAAAGAAAAGTTTCTGGTTGTTAGGCAAAGGCCATCTGGTTTAAGTAAATTTGGTTGAGTAGGCAGCCATGGTGGTGTTGGGAGTTGTTTGTCCACAGCCACAGCATATCGTTGTTTCAATTCGAACCCAAATTCCTCCAATTTCTACACAAACCCAATATTGTACAAGGCGTAAAGCTTTGATATTTACTTCTTCTATGATTTCCTCTTTCATATATACATCTCATCACTCTCCTGCAACTGCTTTCCAAATCGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAG : GATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGATAAGTTTGGTCACATT : GTAACCAATTACCATGTCATTACTAAATTAGCTACTGATAACATCGGACTGCAGCGTTGTAAG : GTTTCTTTAGTGAATACTAAAGGAGAGAGCATAGTTAAGGATGCGAAGATCGTAGGTGTTGATCCAGCATATGATCTGGCCGTTCTCAAG : GTTGATGTTGAAGGTGTTGAAGTTAAACCAGTCTCTGTTGGTACCTCTCGCGGCCTACGTGTAGGTCAAAGTTGTTTTGCCATTGGAAATCCCTATGGATTTGAAAACACTCTCACAACTGGG : GTAGTTAGTGGATTAGGCAGGGAAATACCTGCACCAAATGGAGCTGCCATTAAAGGCGCTATTCAAACAGATGCTGCTATTAAT</gDNA_template>
            <first_frame> *  N  *  A  L  K  K  S  F  W  L  L  G  K  G  H  L  V  *  V  N  L  V  E  *  A  A  M  V  V  L  G  V  V  C  P  Q  P  Q  H  I  V  V  S  I  R  T  Q  I  P  P  I  S  T  Q  T  Q  Y  C  T  R  R  K  A  L  I  F  T  S  S  M  I  S  S  F  I  Y  T  S  H  H  S  P  A  T  A  F  Q  I  E  M  P  Q  Q  E  E  D  R  L  V  H  L  F  Q  :  D  T  S  P  S  V  V  F  I  K  D  L  E  L  A  K  G  S  N  D  S  T  K  V  L  A  D  D  D  N  A  K  V  E  G  T  G  S  G  F  I  W  D  K  F  G  H  I  :  V  T  N  Y  H  V  I  T  K  L  A  T  D  N  I  G  L  Q  R  C  K  :  V  S  L  V  N  T  K  G  E  S  I  V  K  D  A  K  I  V  G  V  D  P  A  Y  D  L  A  V  L  K  :  V  D  V  E  G  V  E  V  K  P  V  S  V  G  T  S  R  G  L  R  V  G  Q  S  C  F  A  I  G  N  P  Y  G  F  E  N  T  L  T  T  G  :  V  V  S  G  L  G  R  E  I  P  A  P  N  G  A  A  I  K  G  A  I  Q  T  D  A  A  I  N </first_frame>
            <second_frame>  E  T  E  L  *  R  K  V  S  G  C  *  A  K  A  I  W  F  K  *  I  W  L  S  R  Q  P  W  W  C  W  E  L  F  V  H  S  H  S  I  S  L  F  Q  F  E  P  K  F  L  Q  F  L  H  K  P  N  I  V  Q  G  V  K  L  *  Y  L  L  L  L  *  F  P  L  S  Y  I  H  L  I  T  L  L  Q  L  L  S  K  S  K  C  L  N  K  K  K  T  D  *  F  T  S  F  R :   I  L  P  L  L  L  F  S  L  R  T  L  S  W  L  K  A  P  M  T  L  L  R  C  *  P  T  M  I  M  Q  K  W  K  G  Q  V  Q  A  S  F  G  I  S  L  V  T  L :   *  P  I  T  M  S  L  L  N  *  L  L  I  T  S  D  C  S  V  V  R :   F  L  *  *  I  L  K  E  R  A  *  L  R  M  R  R  S  *  V  L  I  Q  H  M  I  W  P  F  S  R :   L  M  L  K  V  L  K  L  N  Q  S  L  L  V  P  L  A  A  Y  V  *  V  K  V  V  L  P  L  E  I  P  M  D  L  K  T  L  S  Q  L  G :   *  L  V  D  *  A  G  K  Y  L  H  Q  M  E  L  P  L  K  A  L  F  K  Q  M  L  L  L   </second_frame>
            <third_frame>   K  L  S  S  K  E  K  F  L  V  V  R  Q  R  P  S  G  L  S  K  F  G  *  V  G  S  H  G  G  V  G  S  C  L  S  T  A  T  A  Y  R  C  F  N  S  N  P  N  S  S  N  F  Y  T  N  P  I  L  Y  K  A  *  S  F  D  I  Y  F  F  Y  D  F  L  F  H  I  Y  I  S  S  L  S  C  N  C  F  P  N  R  N  A  S  T  R  R  R  Q  T  S  S  P  L  S   : G  Y  F  P  F  C  C  F  H  *  G  P  *  V  G  *  R  L  Q  *  L  Y  *  G  A  S  R  R  *  *  C  K  S  G  R  D  R  F  R  L  H  L  G  *  V  W  S  H   : C  N  Q  L  P  C  H  Y  *  I  S  Y  *  *  H  R  T  A  A  L  *   : G  F  F  S  E  Y  *  R  R  E  H  S  *  G  C  E  D  R  R  C  *  S  S  I  *  S  G  R  S  Q   : G  *  C  *  R  C  *  S  *  T  S  L  C  W  Y  L  S  R  P  T  C  R  S  K  L  F  C  H  W  K  S  L  W  I  *  K  H  S  H  N  W   : G  S  *  W  I  R  Q  G  N  T  C  T  K  W  S  C  H  *  R  R  Y  S  N  R  C  C  Y  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0015I15.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70103" stop="70339"/>
                    <exon start="70939" stop="71082"/>
                    <exon start="71386" stop="71448"/>
                    <exon start="71559" stop="71648"/>
                    <exon start="72780" stop="72902"/>
                    <exon start="73385" stop="73468"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>741</number_coding_nucleotides>
                  <number_encoded_amino_acids>247</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AAMVVLGVVCPQPQHIVVSIRTQIPPISTQTQYCTRRKALIFTSSMISSFIYTSHHSPATAFQIEMPQQEEDRLVHLFQDTSPSVVFIKDLELAKGSNDSTKVLADDDNAKVEGTGSGFIWDKFGHIVTNYHVITKLATDNIGLQRCKVSLVNTKGESIVKDAKIVGVDPAYDLAVLKVDVEGVEVKPVSVGTSRGLRVGQSCFAIGNPYGFENTLTTGVVSGLGREIPAPNGAAIKGAIQTDAAIN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="70028" e_stop="70339"/>
            <exon e_start="70939" e_stop="71082"/>
            <exon e_start="71386" e_stop="71448"/>
            <exon e_start="71559" e_stop="71648"/>
            <exon e_start="72780" e_stop="73129"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.945" acc_prob="0.773" e_score="1.000"/>
          <exon-intron don_prob="0.351" acc_prob="0.823" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="70028" e_stop="70339" e_length="312"/>
          </exon>
          <intron i_serial="1" don_prob="0.945" acc_prob="0.773">
            <gDNA_intron_boundary i_start="70340" i_stop="70938" i_length="599"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="70939" e_stop="71082" e_length="144"/>
          </exon>
          <intron i_serial="2" don_prob="0.351" acc_prob="0.823">
            <gDNA_intron_boundary i_start="71083" i_stop="71385" i_length="303"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="71386" e_stop="71448" e_length="63"/>
          </exon>
          <intron i_serial="3" don_prob="0.967" acc_prob="0.987">
            <gDNA_intron_boundary i_start="71449" i_stop="71558" i_length="110"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="71559" e_stop="71648" e_length="90"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="71649" i_stop="72779" i_length="1131"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="72780" e_stop="73129" e_length="350"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70028" stop="70339"/>
              <exon start="70939" stop="71082"/>
              <exon start="71386" stop="71429"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260141" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70028" stop="70339"/>
              <exon start="70939" stop="71064"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264150" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70070" stop="70339"/>
              <exon start="70939" stop="71082"/>
              <exon start="71386" stop="71448"/>
              <exon start="71559" stop="71576"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252830" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70090" stop="70339"/>
              <exon start="70939" stop="71082"/>
              <exon start="71386" stop="71448"/>
              <exon start="71559" stop="71635"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245506" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70105" stop="70339"/>
              <exon start="70939" stop="71082"/>
              <exon start="71386" stop="71448"/>
              <exon start="71559" stop="71635"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251788" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70294" stop="70339"/>
              <exon start="70939" stop="71082"/>
              <exon start="71386" stop="71448"/>
              <exon start="71559" stop="71648"/>
              <exon start="72780" stop="73129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275602" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70973" stop="71082"/>
              <exon start="71386" stop="71448"/>
              <exon start="71559" stop="71634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242241" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAAACTGAGCTCTAAAGAAAAGTTTCTGGTTGTTAGGCAAAGGCCATCTGGTTTAAGTAAATTTGGTTGAGTAGGCAGCCATGGTGGTGTTGGGAGTTGTTTGTCCACAGCCACAGCATATCGTTGTTTCAATTCGAACCCAAATTCCTCCAATTTCTACACAAACCCAATATTGTACAAGGCGTAAAGCTTTGATATTTACTTCTTCTATGATTTCCTCTTTCATATATACATCTCATCACTCTCCTGCAACTGCTTTCCAAATCGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAG : GATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGATAAGTTTGGTCACATT : GTAACCAATTACCATGTCATTACTAAATTAGCTACTGATAACATCGGACTGCAGCGTTGTAAG : GTTTCTTTAGTGAATACTAAAGGAGAGAGCATAGTTAAGGATGCGAAGATCGTAGGTGTTGATCCAGCATATGATCTGGCCGTTCTCAAG : GTTGATGTTGAAGGTGTTGAAGTTAAACCAGTCTCTGTTGGTACCTCTCGCGGCCTACGTGTAGGTCAAAGTTGTTTTGCCATTGGAAATCCCTATGGATTTGAAAACACTCTCACAACTGGGGTAGTACATTTCTACAGTTTATTTATAAGTTAAGAAATATACCCGTGTGGAGACTCATTTTATGGTTTCATTTCCAGGAAAAAGTGTTTTTAGCGTTTATTTTTCATGCATTTCTGTTCAACTTACTCAGTATATAACTTGTAAATCTTCATTTCCTTTGGAGTATGCTTAATGTTTTCATTTCTATTGAACGGGAGCTCTCTCCTTTTACTGTATATAGTTTTTAA</gDNA_template>
            <first_frame> *  N  *  A  L  K  K  S  F  W  L  L  G  K  G  H  L  V  *  V  N  L  V  E  *  A  A  M  V  V  L  G  V  V  C  P  Q  P  Q  H  I  V  V  S  I  R  T  Q  I  P  P  I  S  T  Q  T  Q  Y  C  T  R  R  K  A  L  I  F  T  S  S  M  I  S  S  F  I  Y  T  S  H  H  S  P  A  T  A  F  Q  I  E  M  P  Q  Q  E  E  D  R  L  V  H  L  F  Q  :  D  T  S  P  S  V  V  F  I  K  D  L  E  L  A  K  G  S  N  D  S  T  K  V  L  A  D  D  D  N  A  K  V  E  G  T  G  S  G  F  I  W  D  K  F  G  H  I  :  V  T  N  Y  H  V  I  T  K  L  A  T  D  N  I  G  L  Q  R  C  K  :  V  S  L  V  N  T  K  G  E  S  I  V  K  D  A  K  I  V  G  V  D  P  A  Y  D  L  A  V  L  K  :  V  D  V  E  G  V  E  V  K  P  V  S  V  G  T  S  R  G  L  R  V  G  Q  S  C  F  A  I  G  N  P  Y  G  F  E  N  T  L  T  T  G  V  V  H  F  Y  S  L  F  I  S  *  E  I  Y  P  C  G  D  S  F  Y  G  F  I  S  R  K  K  C  F  *  R  L  F  F  M  H  F  C  S  T  Y  S  V  Y  N  L  *  I  F  I  S  F  G  V  C  L  M  F  S  F  L  L  N  G  S  S  L  L  L  L  Y  I  V  F   </first_frame>
            <second_frame>  E  T  E  L  *  R  K  V  S  G  C  *  A  K  A  I  W  F  K  *  I  W  L  S  R  Q  P  W  W  C  W  E  L  F  V  H  S  H  S  I  S  L  F  Q  F  E  P  K  F  L  Q  F  L  H  K  P  N  I  V  Q  G  V  K  L  *  Y  L  L  L  L  *  F  P  L  S  Y  I  H  L  I  T  L  L  Q  L  L  S  K  S  K  C  L  N  K  K  K  T  D  *  F  T  S  F  R :   I  L  P  L  L  L  F  S  L  R  T  L  S  W  L  K  A  P  M  T  L  L  R  C  *  P  T  M  I  M  Q  K  W  K  G  Q  V  Q  A  S  F  G  I  S  L  V  T  L :   *  P  I  T  M  S  L  L  N  *  L  L  I  T  S  D  C  S  V  V  R :   F  L  *  *  I  L  K  E  R  A  *  L  R  M  R  R  S  *  V  L  I  Q  H  M  I  W  P  F  S  R :   L  M  L  K  V  L  K  L  N  Q  S  L  L  V  P  L  A  A  Y  V  *  V  K  V  V  L  P  L  E  I  P  M  D  L  K  T  L  S  Q  L  G  *  Y  I  S  T  V  Y  L  *  V  K  K  Y  T  R  V  E  T  H  F  M  V  S  F  P  G  K  S  V  F  S  V  Y  F  S  C  I  S  V  Q  L  T  Q  Y  I  T  C  K  S  S  F  P  L  E  Y  A  *  C  F  H  F  Y  *  T  G  A  L  S  F  Y  C  I  *  F  L  </second_frame>
            <third_frame>   K  L  S  S  K  E  K  F  L  V  V  R  Q  R  P  S  G  L  S  K  F  G  *  V  G  S  H  G  G  V  G  S  C  L  S  T  A  T  A  Y  R  C  F  N  S  N  P  N  S  S  N  F  Y  T  N  P  I  L  Y  K  A  *  S  F  D  I  Y  F  F  Y  D  F  L  F  H  I  Y  I  S  S  L  S  C  N  C  F  P  N  R  N  A  S  T  R  R  R  Q  T  S  S  P  L  S   : G  Y  F  P  F  C  C  F  H  *  G  P  *  V  G  *  R  L  Q  *  L  Y  *  G  A  S  R  R  *  *  C  K  S  G  R  D  R  F  R  L  H  L  G  *  V  W  S  H   : C  N  Q  L  P  C  H  Y  *  I  S  Y  *  *  H  R  T  A  A  L  *   : G  F  F  S  E  Y  *  R  R  E  H  S  *  G  C  E  D  R  R  C  *  S  S  I  *  S  G  R  S  Q   : G  *  C  *  R  C  *  S  *  T  S  L  C  W  Y  L  S  R  P  T  C  R  S  K  L  F  C  H  W  K  S  L  W  I  *  K  H  S  H  N  W  G  S  T  F  L  Q  F  I  Y  K  L  R  N  I  P  V  W  R  L  I  L  W  F  H  F  Q  E  K  V  F  L  A  F  I  F  H  A  F  L  F  N  L  L  S  I  *  L  V  N  L  H  F  L  W  S  M  L  N  V  F  I  S  I  E  R  E  L  S  P  F  T  V  Y  S  F  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0015I15.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70103" stop="70339"/>
                    <exon start="70939" stop="71082"/>
                    <exon start="71386" stop="71448"/>
                    <exon start="71559" stop="71648"/>
                    <exon start="72780" stop="72935"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>687</number_coding_nucleotides>
                  <number_encoded_amino_acids>229</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AAMVVLGVVCPQPQHIVVSIRTQIPPISTQTQYCTRRKALIFTSSMISSFIYTSHHSPATAFQIEMPQQEEDRLVHLFQDTSPSVVFIKDLELAKGSNDSTKVLADDDNAKVEGTGSGFIWDKFGHIVTNYHVITKLATDNIGLQRCKVSLVNTKGESIVKDAKIVGVDPAYDLAVLKVDVEGVEVKPVSVGTSRGLRVGQSCFAIGNPYGFENTLTTGVVHFYSLFIS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="70028" e_stop="70339"/>
            <exon e_start="70939" e_stop="71082"/>
            <exon e_start="71559" e_stop="71648"/>
            <exon e_start="72780" e_stop="72847"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.945" acc_prob="0.773" e_score="1.000"/>
          <exon-intron don_prob="0.351" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="70028" e_stop="70339" e_length="312"/>
          </exon>
          <intron i_serial="1" don_prob="0.945" acc_prob="0.773">
            <gDNA_intron_boundary i_start="70340" i_stop="70938" i_length="599"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="70939" e_stop="71082" e_length="144"/>
          </exon>
          <intron i_serial="2" don_prob="0.351" acc_prob="0.987">
            <gDNA_intron_boundary i_start="71083" i_stop="71558" i_length="476"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="71559" e_stop="71648" e_length="90"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="71649" i_stop="72779" i_length="1131"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="72780" e_stop="72847" e_length="68"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70028" stop="70339"/>
              <exon start="70939" stop="71064"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264150" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70029" stop="70339"/>
              <exon start="70939" stop="71082"/>
              <exon start="71559" stop="71648"/>
              <exon start="72780" stop="72847"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207470" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70029" stop="70339"/>
              <exon start="70939" stop="71082"/>
              <exon start="71559" stop="71621"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205698" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAAACTGAGCTCTAAAGAAAAGTTTCTGGTTGTTAGGCAAAGGCCATCTGGTTTAAGTAAATTTGGTTGAGTAGGCAGCCATGGTGGTGTTGGGAGTTGTTTGTCCACAGCCACAGCATATCGTTGTTTCAATTCGAACCCAAATTCCTCCAATTTCTACACAAACCCAATATTGTACAAGGCGTAAAGCTTTGATATTTACTTCTTCTATGATTTCCTCTTTCATATATACATCTCATCACTCTCCTGCAACTGCTTTCCAAATCGAAATGCCTCAACAAGAAGAAGACAGACTAGTTCACCTCTTTCAG : GATACTTCCCCTTCTGTTGTTTTCATTAAGGACCTTGAGTTGGCTAAAGGCTCCAATGACTCTACTAAGGTGCTAGCCGACGATGATAATGCAAAAGTGGAAGGGACAGGTTCAGGCTTCATTTGGGATAAGTTTGGTCACATT : GTTTCTTTAGTGAATACTAAAGGAGAGAGCATAGTTAAGGATGCGAAGATCGTAGGTGTTGATCCAGCATATGATCTGGCCGTTCTCAAG : GTTGATGTTGAAGGTGTTGAAGTTAAACCAGTCTCTGTTGGTACCTCTCGCGGCCTACGTGTAGGTCA</gDNA_template>
            <first_frame> *  N  *  A  L  K  K  S  F  W  L  L  G  K  G  H  L  V  *  V  N  L  V  E  *  A  A  M  V  V  L  G  V  V  C  P  Q  P  Q  H  I  V  V  S  I  R  T  Q  I  P  P  I  S  T  Q  T  Q  Y  C  T  R  R  K  A  L  I  F  T  S  S  M  I  S  S  F  I  Y  T  S  H  H  S  P  A  T  A  F  Q  I  E  M  P  Q  Q  E  E  D  R  L  V  H  L  F  Q  :  D  T  S  P  S  V  V  F  I  K  D  L  E  L  A  K  G  S  N  D  S  T  K  V  L  A  D  D  D  N  A  K  V  E  G  T  G  S  G  F  I  W  D  K  F  G  H  I  :  V  S  L  V  N  T  K  G  E  S  I  V  K  D  A  K  I  V  G  V  D  P  A  Y  D  L  A  V  L  K  :  V  D  V  E  G  V  E  V  K  P  V  S  V  G  T  S  R  G  L  R  V  G   </first_frame>
            <second_frame>  E  T  E  L  *  R  K  V  S  G  C  *  A  K  A  I  W  F  K  *  I  W  L  S  R  Q  P  W  W  C  W  E  L  F  V  H  S  H  S  I  S  L  F  Q  F  E  P  K  F  L  Q  F  L  H  K  P  N  I  V  Q  G  V  K  L  *  Y  L  L  L  L  *  F  P  L  S  Y  I  H  L  I  T  L  L  Q  L  L  S  K  S  K  C  L  N  K  K  K  T  D  *  F  T  S  F  R :   I  L  P  L  L  L  F  S  L  R  T  L  S  W  L  K  A  P  M  T  L  L  R  C  *  P  T  M  I  M  Q  K  W  K  G  Q  V  Q  A  S  F  G  I  S  L  V  T  L :   F  L  *  *  I  L  K  E  R  A  *  L  R  M  R  R  S  *  V  L  I  Q  H  M  I  W  P  F  S  R :   L  M  L  K  V  L  K  L  N  Q  S  L  L  V  P  L  A  A  Y  V  *  V  </second_frame>
            <third_frame>   K  L  S  S  K  E  K  F  L  V  V  R  Q  R  P  S  G  L  S  K  F  G  *  V  G  S  H  G  G  V  G  S  C  L  S  T  A  T  A  Y  R  C  F  N  S  N  P  N  S  S  N  F  Y  T  N  P  I  L  Y  K  A  *  S  F  D  I  Y  F  F  Y  D  F  L  F  H  I  Y  I  S  S  L  S  C  N  C  F  P  N  R  N  A  S  T  R  R  R  Q  T  S  S  P  L  S   : G  Y  F  P  F  C  C  F  H  *  G  P  *  V  G  *  R  L  Q  *  L  Y  *  G  A  S  R  R  *  *  C  K  S  G  R  D  R  F  R  L  H  L  G  *  V  W  S  H   : C  F  F  S  E  Y  *  R  R  E  H  S  *  G  C  E  D  R  R  C  *  S  S  I  *  S  G  R  S  Q   : G  *  C  *  R  C  *  S  *  T  S  L  C  W  Y  L  S  R  P  T  C  R  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0015I15.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70103" stop="70339"/>
                    <exon start="70939" stop="71082"/>
                    <exon start="71559" stop="71648"/>
                    <exon start="72780" stop="72845"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>537</number_coding_nucleotides>
                  <number_encoded_amino_acids>179</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AAMVVLGVVCPQPQHIVVSIRTQIPPISTQTQYCTRRKALIFTSSMISSFIYTSHHSPATAFQIEMPQQEEDRLVHLFQDTSPSVVFIKDLELAKGSNDSTKVLADDDNAKVEGTGSGFIWDKFGHIVSLVNTKGESIVKDAKIVGVDPAYDLAVLKVDVEGVEVKPVSVGTSRGLRVG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="78665" PGL_stop="76986"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="78665" e_stop="78520"/>
            <exon e_start="77655" e_stop="76986"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.597" acc_prob="0.968" e_score="1.000"/>
          <exon-only e_score="0.947"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="78665" e_stop="78520" e_length="146"/>
          </exon>
          <intron i_serial="1" don_prob="0.597" acc_prob="0.968">
            <gDNA_intron_boundary i_start="78519" i_stop="77656" i_length="864"/>
          </intron>
          <exon e_serial="2" e_score="0.947">
            <gDNA_exon_boundary e_start="77655" e_stop="76986" e_length="670"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78665" stop="78520"/>
              <exon start="77655" stop="77065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543324" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78646" stop="78520"/>
              <exon start="77655" stop="77057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543323" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78610" stop="78520"/>
              <exon start="77655" stop="77353"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303269" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77655" stop="76986"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419661" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77655" stop="77011"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419660" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77655" stop="77069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E561239" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAAAAAAAAAAGAGGCATTGTTATAACAGCGCATTGTGAAGTGGAATACGATTTGCGCCGAAATACCGAAACAAAGTAGAAGCAAGTGTTGCACATATTTTTTGGAGCTTAGTTTCTCCAGAATTTTGCAAAATTTATTCAAAAG : GGAAGAGGAGTTTATGGTTTAGTTGTTTGTCTCTTAGCATATGCTGTAGCTACAATCACAGAATTGTACGGAAAATTCCTTCATTGATCTAAACTGGACTAAAAATGAGCACCAAGGAACTAGAGACATACCTATCTGATGTTGGAAGCTCAAATCAGTTCGAGACAAACAGTTCAAAATATGTCTCTCATGTCAAGAAGTTACTATATCGACGAATGCTGGTTGGTATAAGTGATGGAAGGTTCTTTCTAGGTACATTTTATTGTATAGATAAGCAAGGAAACATAATTCTTCAAGATGCAGTCGAGTACCGTAGCACTAGAAGATCTGCCCCTTCTCCAATGGAACAGCGAGTTCTTGGTCTCATTTTAATCCCTTCTTCATGTCGGAAAACATGTCATGTGGATTGTTCTATTGACGAACAGTTGTCACTAATGTCGCTTGGGGAGCAAAAGTCATAATTATTCGTGGCGATAAACTTGATCCAATTGGATGAACATCTTCCCTGTTTGATTTATCGTGACAATTGATTATTTCATTTTCAAGTGTGTACTTTACTGGTGTTATATTATCATATGTTTTTTCTCTTTTAGGAAGAAGCTGATGAGCCTGTCATCGATAAACTTGTTATTTTCTGTTGCATCCCTCTCTCTAGTGTTCCTTATCGATG</gDNA_template>
            <first_frame> R  K  K  K  E  A  L  L  *  Q  R  I  V  K  W  N  T  I  C  A  E  I  P  K  Q  S  R  S  K  C  C  T  Y  F  L  E  L  S  F  S  R  I  L  Q  N  L  F  K  R :   E  E  E  F  M  V  *  L  F  V  S  *  H  M  L  *  L  Q  S  Q  N  C  T  E  N  S  F  I  D  L  N  W  T  K  N  E  H  Q  G  T  R  D  I  P  I  *  C  W  K  L  K  S  V  R  D  K  Q  F  K  I  C  L  S  C  Q  E  V  T  I  S  T  N  A  G  W  Y  K  *  W  K  V  L  S  R  Y  I  L  L  Y  R  *  A  R  K  H  N  S  S  R  C  S  R  V  P  *  H  *  K  I  C  P  F  S  N  G  T  A  S  S  W  S  H  F  N  P  F  F  M  S  E  N  M  S  C  G  L  F  Y  *  R  T  V  V  T  N  V  A  W  G  A  K  V  I  I  I  R  G  D  K  L  D  P  I  G  *  T  S  S  L  F  D  L  S  *  Q  L  I  I  S  F  S  S  V  Y  F  T  G  V  I  L  S  Y  V  F  S  L  L  G  R  S  *  *  A  C  H  R  *  T  C  Y  F  L  L  H  P  S  L  *  C  S  L  S  M </first_frame>
            <second_frame>  E  K  K  K  R  H  C  Y  N  S  A  L  *  S  G  I  R  F  A  P  K  Y  R  N  K  V  E  A  S  V  A  H  I  F  W  S  L  V  S  P  E  F  C  K  I  Y  S  K   : G  K  R  S  L  W  F  S  C  L  S  L  S  I  C  C  S  Y  N  H  R  I  V  R  K  I  P  S  L  I  *  T  G  L  K  M  S  T  K  E  L  E  T  Y  L  S  D  V  G  S  S  N  Q  F  E  T  N  S  S  K  Y  V  S  H  V  K  K  L  L  Y  R  R  M  L  V  G  I  S  D  G  R  F  F  L  G  T  F  Y  C  I  D  K  Q  G  N  I  I  L  Q  D  A  V  E  Y  R  S  T  R  R  S  A  P  S  P  M  E  Q  R  V  L  G  L  I  L  I  P  S  S  C  R  K  T  C  H  V  D  C  S  I  D  E  Q  L  S  L  M  S  L  G  E  Q  K  S  *  L  F  V  A  I  N  L  I  Q  L  D  E  H  L  P  C  L  I  Y  R  D  N  *  L  F  H  F  Q  V  C  T  L  L  V  L  Y  Y  H  M  F  F  L  F  *  E  E  A  D  E  P  V  I  D  K  L  V  I  F  C  C  I  P  L  S  S  V  P  Y  R   </second_frame>
            <third_frame>   K  K  K  R  G  I  V  I  T  A  H  C  E  V  E  Y  D  L  R  R  N  T  E  T  K  *  K  Q  V  L  H  I  F  F  G  A  *  F  L  Q  N  F  A  K  F  I  Q  K  :  G  R  G  V  Y  G  L  V  V  C  L  L  A  Y  A  V  A  T  I  T  E  L  Y  G  K  F  L  H  *  S  K  L  D  *  K  *  A  P  R  N  *  R  H  T  Y  L  M  L  E  A  Q  I  S  S  R  Q  T  V  Q  N  M  S  L  M  S  R  S  Y  Y  I  D  E  C  W  L  V  *  V  M  E  G  S  F  *  V  H  F  I  V  *  I  S  K  E  T  *  F  F  K  M  Q  S  S  T  V  A  L  E  D  L  P  L  L  Q  W  N  S  E  F  L  V  S  F  *  S  L  L  H  V  G  K  H  V  M  W  I  V  L  L  T  N  S  C  H  *  C  R  L  G  S  K  S  H  N  Y  S  W  R  *  T  *  S  N  W  M  N  I  F  P  V  *  F  I  V  T  I  D  Y  F  I  F  K  C  V  L  Y  W  C  Y  I  I  I  C  F  F  S  F  R  K  K  L  M  S  L  S  S  I  N  L  L  F  S  V  A  S  L  S  L  V  F  L  I  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0015I15.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77563" stop="77195"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>366</number_coding_nucleotides>
                  <number_encoded_amino_acids>122</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TGLKMSTKELETYLSDVGSSNQFETNSSKYVSHVKKLLYRRMLVGISDGRFFLGTFYCIDKQGNIILQDAVEYRSTRRSAPSPMEQRVLGLILIPSSCRKTCHVDCSIDEQLSLMSLGEQKS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0015I15.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="78625" stop="78520"/>
                    <exon start="77655" stop="77564"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SGIRFAPKYRNKVEASVAHIFWSLVSPEFCKIYSKGKRSLWFSCLSLSICCSYNHRIVRKIPSLI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="76996" PGL_stop="77517"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="76996" e_stop="77517"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.950"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.950">
            <gDNA_exon_boundary e_start="76996" e_stop="77517" e_length="522"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76996" stop="77517"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419758" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAACACTAGAGAGAGGGATGCAACAGAAAATAACAAGTTTATCGATGACAGGCTCATCAGCTTCTTCCTAAAAGAGAAAAAACATATGATAATATAACACCAGTAAAGTACACACTTGAAAATGAAATAATCAATTGTCACGATAAATCAAACAGGGAAGATGTTCATCCAATTGGATCAAGTTTATCGCCACGAATAATTATGACTTTTGCTCCCCAAGCGACATTAGTGACAACTGTTCGTCAATAGAACAATCCACATGACATGTTTTCCGACATGAAGAAGGGATTAAAATGAGACCAAGAACTCGCTGTTCCATTGGAGAAGGGGCAGATCTTCTAGTGCTACGGTACTCGACTGCATCTTGAAGAATTATGTTTCCTTGCTTATCTATACAATAAAATGTACCTAGAAAGAACCTTCCATCACTTATACCAACCAGCATTCGTCGATATAGTAACTTCTTGACATGAGAGACATATTTTGAACTGTTTGTCTCGAACTGATTTGAGCTTCCAACAT</gDNA_template>
            <first_frame> E  H  *  R  E  G  C  N  R  K  *  Q  V  Y  R  *  Q  A  H  Q  L  L  P  K  R  E  K  T  Y  D  N  I  T  P  V  K  Y  T  L  E  N  E  I  I  N  C  H  D  K  S  N  R  E  D  V  H  P  I  G  S  S  L  S  P  R  I  I  M  T  F  A  P  Q  A  T  L  V  T  T  V  R  Q  *  N  N  P  H  D  M  F  S  D  M  K  K  G  L  K  *  D  Q  E  L  A  V  P  L  E  K  G  Q  I  F  *  C  Y  G  T  R  L  H  L  E  E  L  C  F  L  A  Y  L  Y  N  K  M  Y  L  E  R  T  F  H  H  L  Y  Q  P  A  F  V  D  I  V  T  S  *  H  E  R  H  I  L  N  C  L  S  R  T  D  L  S  F  Q  H </first_frame>
            <second_frame>  N  T  R  E  R  D  A  T  E  N  N  K  F  I  D  D  R  L  I  S  F  F  L  K  E  K  K  H  M  I  I  *  H  Q  *  S  T  H  L  K  M  K  *  S  I  V  T  I  N  Q  T  G  K  M  F  I  Q  L  D  Q  V  Y  R  H  E  *  L  *  L  L  L  P  K  R  H  *  *  Q  L  F  V  N  R  T  I  H  M  T  C  F  P  T  *  R  R  D  *  N  E  T  K  N  S  L  F  H  W  R  R  G  R  S  S  S  A  T  V  L  D  C  I  L  K  N  Y  V  S  L  L  I  Y  T  I  K  C  T  *  K  E  P  S  I  T  Y  T  N  Q  H  S  S  I  *  *  L  L  D  M  R  D  I  F  *  T  V  C  L  E  L  I  *  A  S  N   </second_frame>
            <third_frame>   T  L  E  R  G  M  Q  Q  K  I  T  S  L  S  M  T  G  S  S  A  S  S  *  K  R  K  N  I  *  *  Y  N  T  S  K  V  H  T  *  K  *  N  N  Q  L  S  R  *  I  K  Q  G  R  C  S  S  N  W  I  K  F  I  A  T  N  N  Y  D  F  C  S  P  S  D  I  S  D  N  C  S  S  I  E  Q  S  T  *  H  V  F  R  H  E  E  G  I  K  M  R  P  R  T  R  C  S  I  G  E  G  A  D  L  L  V  L  R  Y  S  T  A  S  *  R  I  M  F  P  C  L  S  I  Q  *  N  V  P  R  K  N  L  P  S  L  I  P  T  S  I  R  R  Y  S  N  F  L  T  *  E  T  Y  F  E  L  F  V  S  N  *  F  E  L  P  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0015I15.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77044" stop="77244"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QAHQLLPKREKTYDNITPVKYTLENEIINCHDKSNREDVHPIGSSLSPRIIMTFAPQATLVTTVRQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="144366" PGL_stop="143990"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="144366" e_stop="143990"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="144366" e_stop="143990" e_length="377"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="144366" stop="143990"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578130" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTGGAGGGACCCTAACATTTGACCCCAAAACTGTCAAATTGACAATGGTAGTCTACGAACCAAACGATGAGTCGTGATGGGTAAACGGACCATCGATGGCTGTGGTACTTAGAAATTTTGTTAAATGGATTCCAAAACCAGTCTCTGTCGCAAACGACAAAGTGCACTACGGGGTCGTTAATGGAGTGACGGGCCATAGACGAGCAACCATCGTTTGGAGGGCGATTTTACTGTTAAGTTTTAGTTAGGATGGGTTAATAAGATTTTTATTTAATTAATTAGTTTATGGTTAAGGGGTGGTTAATTAAGTTATTTGGGGGAATATATAAGGGCTAAACTTCATTAAACTAATCTAACACCCCACAATTCCAGACCC</gDNA_template>
            <first_frame> L  G  G  T  L  T  F  D  P  K  T  V  K  L  T  M  V  V  Y  E  P  N  D  E  S  *  W  V  N  G  P  S  M  A  V  V  L  R  N  F  V  K  W  I  P  K  P  V  S  V  A  N  D  K  V  H  Y  G  V  V  N  G  V  T  G  H  R  R  A  T  I  V  W  R  A  I  L  L  L  S  F  S  *  D  G  L  I  R  F  L  F  N  *  L  V  Y  G  *  G  V  V  N  *  V  I  W  G  N  I  *  G  L  N  F  I  K  L  I  *  H  P  T  I  P  D   </first_frame>
            <second_frame>  L  E  G  P  *  H  L  T  P  K  L  S  N  *  Q  W  *  S  T  N  Q  T  M  S  R  D  G  *  T  D  H  R  W  L  W  Y  L  E  I  L  L  N  G  F  Q  N  Q  S  L  S  Q  T  T  K  C  T  T  G  S  L  M  E  *  R  A  I  D  E  Q  P  S  F  G  G  R  F  Y  C  *  V  L  V  R  M  G  *  *  D  F  Y  L  I  N  *  F  M  V  K  G  W  L  I  K  L  F  G  G  I  Y  K  G  *  T  S  L  N  *  S  N  T  P  Q  F  Q  T  </second_frame>
            <third_frame>   W  R  D  P  N  I  *  P  Q  N  C  Q  I  D  N  G  S  L  R  T  K  R  *  V  V  M  G  K  R  T  I  D  G  C  G  T  *  K  F  C  *  M  D  S  K  T  S  L  C  R  K  R  Q  S  A  L  R  G  R  *  W  S  D  G  P  *  T  S  N  H  R  L  E  G  D  F  T  V  K  F  *  L  G  W  V  N  K  I  F  I  *  L  I  S  L  W  L  R  G  G  *  L  S  Y  L  G  E  Y  I  R  A  K  L  H  *  T  N  L  T  P  H  N  S  R  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0015I15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 207 chains have been computed
$ 
$ memory statistics:
$ 47720 bytes spliced alignments in total
$ 23 spliced alignments have been stored
$ 2074 bytes was the average size of a spliced alignment
$ 14352 bytes predicted gene locations in total
$ 8 predicted gene locations have been stored
$ 1794 bytes was the average size of a predicted gene location
$ 2 megabytes was the average size of the backtrace matrix
$ 244 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 11:35:45
-->
