<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 08:40:34"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E308814" ref_strand="+" ref_description="SGN-E308814 [cLEZ-14-D21]">
      <seq>tggtggttacggaggaggtgctggatgttgtgaaggtggtggacaccgtggtggctacgctccttaagcggtcattctaatctaaaagtatccatcttcttacctacactattaaaaaaataatgtactgagattgtggtaggaagatgttatatatatatcggaagaaaaagaattgtacttaagtcctgcattctttttaagtgtcatgtggtttcctttaaaagcatcattaacatatgattgcttgcattttacatattgaaatggttggccaatattctcaaaataaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="2882" stop="1989"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2582" g_stop="2288" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="295" r_length="295" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E308814" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>295</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308814" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2582" e_stop="2288"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTGGTTACGGAGGAGGTGCTGGAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGATATGATTGCTTGCATTTTACATATTGAAATGGTTGGCAAATATTCTCAATCTATAAG</genome_strand>
        <mrna_strand>TGGTGGTTACGGAGGAGGTGCTGGATGTTGTGAAGGTGGTGGACACCGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATCGGAAGAAAAAGAATTGTACTTAAGTCCTGCATTCTTTTTAAGTGTCATGTGGTTTCCTTTAAAAGCATCATTAACATATGATTGCTTGCATTTTACATATTGAAATGGTTGGCCAATATTCTCAAAATAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E235124" ref_strand="+" ref_description="SGN-E235124 [cLEL-6-K3](-)">
      <seq>ttcggctccaggtggagagcatgctggtggttacggaggaggtgctgcaggtggtgaaggtggtggacacggtggtggctacgctccttaagcggtcattctaatctaaaagtatccatcttcttacctacactattaaaaaaataatgtactgagattgtggtaggaagatgttatatatatattggaagaaaaagaattgtagttaagtcctgcaatctttttaagtgtaatgtggtttcctttaaaagcaacattaagatatgattgcttgcattttacatattgaaatggttggcaaatattctcaatctaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="2898" stop="1989"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2606" g_stop="2289" g_length="318"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="318" r_length="318" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="319" polyA_stop="330"/>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E235124" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>318</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E235124" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2606" e_stop="2289"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCCTATGCCGGTGGAGAGCATGCTGGTGGTTACGGAGGAGGTGCTGGAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGATATGATTGCTTGCATTTTACATATTGAAATGGTTGGCAAATATTCTCAATCTATAA</genome_strand>
        <mrna_strand>TTCGGCTCCAGGTGGAGAGCATGCTGGTGGTTACGGAGGAGGTGCTGCAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGATATGATTGCTTGCATTTTACATATTGAAATGGTTGGCAAATATTCTCAATCTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E219481" ref_strand="+" ref_description="SGN-E219481 [cLEL-11-J8](-)">
      <seq>ggcaccaaaggtggtggacacggtggtggctacgctccttaagcggtcattctaatctaaaagtatccatcttcttacctacactattaaaaaaataatgtactgagattgtggtaggaagatgttatatatatattggaagaaaaagaattgtagttaagtcctgcaatctttttaagtgtaatgtggtttcctttaaaagcaacattaagatatgattgcttgcattttacatattgaaatggttggcaaatattctcaaaaaaaaaaaaaaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="2850" stop="1996"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2557" g_stop="2297" g_length="261"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="261" r_length="261" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="262" polyA_stop="279"/>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E219481" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>261</cumulative_length_of_scored_exons>
        <coverage percentage="0.935" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E219481" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2557" e_stop="2297"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGATATGATTGCTTGCATTTTACATATTGAAATGGTTGGCAAATATTCTCA</genome_strand>
        <mrna_strand>GGCACCAAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGATATGATTGCTTGCATTTTACATATTGAAATGGTTGGCAAATATTCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E735126" ref_strand="+" ref_description="SGN-E735126 [LB14CA09]">
      <seq>gctggaggagaaggaggagcctcaggtggtggatatggtagtggaggaggagctggtggtggtgcaggaggagcacatggaggagcatatggtggaggcggtggtagtggtgccggtggtggtggagcctatgccggtggagagcatgctggtggttacggaggaggtgctggaggtggtgaaggtggtggacacggtggtggctacgctccttaagcggtcattctaatctaaaagtatccatcttcttacctacactattaaaaaaataatgtactgagattgtggtaggaagatgttatatatatattggaagaaaaagaattgtagttaagtcctgcaatctttttaagtgtaatgtggtttcctttaaaagcaacattaagatatgattgcttgcattttacatattgaaatggttggcaaataaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="3031" stop="2003"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2731" g_stop="2310" g_length="422"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="422" r_length="422" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="425" polyA_stop="449"/>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E735126" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>422</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E735126" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2731" e_stop="2310"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGGAGGAGAAGGAGGAGCCTCAGGTGGTGGATATGGTAGTGGAGGAGGAGCTGGTGGTGGTGCAGGAGGAGCACATGGAGGAGCATATGGTGGAGGCGGTGGTAGTGGTGCCGGTGGTGGTGGAGCCTATGCCGGTGGAGAGCATGCTGGTGGTTACGGAGGAGGTGCTGGAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGATATGATTGCTTGCATTTTACATATTGAAATGGTTG</genome_strand>
        <mrna_strand>GCTGGAGGAGAAGGAGGAGCCTCAGGTGGTGGATATGGTAGTGGAGGAGGAGCTGGTGGTGGTGCAGGAGGAGCACATGGAGGAGCATATGGTGGAGGCGGTGGTAGTGGTGCCGGTGGTGGTGGAGCCTATGCCGGTGGAGAGCATGCTGGTGGTTACGGAGGAGGTGCTGGAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGATATGATTGCTTGCATTTTACATATTGAAATGGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E309715" ref_strand="+" ref_description="SGN-E309715 [cLEY-26-K8]">
      <seq>gagggaggtgcctggaggtggtgaaggtggtggacacggtggtggctacgcctccttaagcggtcattctaatctaaaagtatccatcttcttacctacactattaaaaaaataatgtactgagattgtggtaggaagatgttatatatatattggaagaaaaagaattgtagttaagtcctgcaatctttttaagtgtaatgtggtttcctttaaaagcaacattaagatatgattgcttgcattttacatattgaaatggttggcaaataaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="2871" stop="2003"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2572" g_stop="2310" g_length="263"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="265" r_length="265" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="268" polyA_stop="280"/>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E309715" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>263</cumulative_length_of_scored_exons>
        <coverage percentage="0.939" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309715" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2572" e_stop="2310"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGGAGGTG-CTGGAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACG-CTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGATATGATTGCTTGCATTTTACATATTGAAATGGTTG</genome_strand>
        <mrna_strand>GAGGGAGGTGCCTGGAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGATATGATTGCTTGCATTTTACATATTGAAATGGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E735202" ref_strand="+" ref_description="SGN-E735202 [LB14CH01]">
      <seq>ccttagcttaaaattgttaacattgttttctttgtgttattacgtattggaatatgttcagccgctcgaacgctcctcacttacgatcatgttggtgttgggggtgaagtaggcgcttatgctggtggtggtggaggaggttccggcggaggtggtgcctatgcagaaggaggagcctcaggtggtggatatggtagtggaggaggagctggtggtggtgcaggaggagcacatggaggagcatatggtggaggcggtggtagtggtgccggtggtggtggagcctatgccggtggagagcatgctggtggttacggaggaggtgctggaggtggtgaaggtggtggacacggtggtggctacgctccttaagcggtcattctaatctaaaagtatccatcttcttacctacactattaaaaaaataatgtactgagattgtggtaggaagatgttatatatatattggaagaaaaagaattgtagttaagtcctgcaatctttttaagtgtaatgtggtttcctttaaaagcaacattaagatatgattgcttgcattttacatattgaaaaacaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="3720" stop="2016"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3424" g_stop="3259" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3258" i_stop="2722" i_length="537">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2721" g_stop="2317" g_length="405"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="571" r_length="405" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E735202" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>571</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E735202" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3424" e_stop="3259"/>
          <exon e_start="2721" e_stop="2317"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGAAGCTTAAAATTGTTAACATTGTTTTCTTTGTGTTATTAGGTATTGGAATATGTTCAGCCGCTCGAACGCTCCTCACTTACGATCATGTTGGTGTTGGGGGTGAAGTAGGCGCTTATGCTGGTGGTGGTGGAGGAGGTTCCGGCGGAGGTGGTGCCTATGCAGCTGGAGGACATGATGGTGGATATGCTGGAGGAGGTGGTAGTGGAAGTGGAGCTGGAGGTGGCCATGCTGGTGGTGGATATGCTGGAGGAGGTGGTGGTGGAAGTGGAGCTGGAGGTGCTCATGCTGGCGGACACGATGGTGGATATGCTTCTGGAGGTGGTGAAGGTGGTGGAGCTGGAGGTGGCCATGCTGGTGGAGGATATGCTGGAGGAGGTGGTGGTGGAAGTGGAGCTGGAGGTGCTCATGCTGGCGGAGAACATGATGGTGGATATGCTGCTGGAGGTGGTGAAGGTGGTGGTAGTGGATATGGTGGTGCAGGGTCAGCAGATGGTGGATATGCTGCTGGAGGTGGTGGAGGTAGTGGTGGTGGAGGTGGTGGTGCAGTTGCTGGAGGTGGAGCACATGGTGGCGGTGCATATGCTGGAGGTTCAGGAGGAGGTACTGGTGGCGGCTATGGTGCTGGTGGAGCACCCGGGGGTGGATATGGTGGTGGAGGTGGACATGGAGGCGGTGGTGGTAGTGCGTATGCTGGAGGAGAAGGAGGAGCCTCAGGTGGTGGATATGGTAGTGGAGGAGGAGCTGGTGGTGGTGCAGGAGGAGCACATGGAGGAGCATATGGTGGAGGCGGTGGTAGTGGTGCCGGTGGTGGTGGAGCCTATGCCGGTGGAGAGCATGCTGGTGGTTACGGAGGAGGTGCTGGAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGATATGATTGCTTGCATTTTACATATTGAA</genome_strand>
        <mrna_strand>CCTTAGCTTAAAATTGTTAACATTGTTTTCTTTGTGTTATTACGTATTGGAATATGTTCAGCCGCTCGAACGCTCCTCACTTACGATCATGTTGGTGTTGGGGGTGAAGTAGGCGCTTATGCTGGTGGTGGTGGAGGAGGTTCCGGCGGAGGTGGTGCCTATGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAGGAGCCTCAGGTGGTGGATATGGTAGTGGAGGAGGAGCTGGTGGTGGTGCAGGAGGAGCACATGGAGGAGCATATGGTGGAGGCGGTGGTAGTGGTGCCGGTGGTGGTGGAGCCTATGCCGGTGGAGAGCATGCTGGTGGTTACGGAGGAGGTGCTGGAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGATATGATTGCTTGCATTTTACATATTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E302786" ref_strand="+" ref_description="SGN-E302786 [cLEY-2-A21]">
      <seq>ttacggaggaggtgctggaggtggtgaaggtggtggacacggtggtggctacgctccttaagcggtcattctaatctaaaagtatccatcttcttacctacactattaaaaaaataatgtactgagattgtggtaggaagatgttatatatatattggaagaaaaagaattgtagttaagtcctgcaatctttttaagtgtaatgtggtttcctttaaaagcaacattaagatatgattgcttgcattttacatattgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="2876" stop="2016"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2576" g_stop="2317" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="260" r_length="260" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E302786" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>260</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E302786" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2576" e_stop="2317"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACGGAGGAGGTGCTGGAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGATATGATTGCTTGCATTTTACATATTGAA</genome_strand>
        <mrna_strand>TTACGGAGGAGGTGCTGGAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGATATGATTGCTTGCATTTTACATATTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E309278" ref_strand="+" ref_description="SGN-E309278 [cLEY-22-B19]">
      <seq>gaggaggtgctggaggtggtgaaggtggtggacacggtggtggctacgctccttaagcggtcattctaatctaaaagtatccatcttcttacctacactattaaaaaaataatgtactgagattgtggtaggaagatgttatatatatattggaagaaaaagaattgtagttaagtcctgcaatctttttaagtgtaatgtggtttcctttaaaagcaacattaagatatgattgcttgcattttacatattgaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="2871" stop="2016"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2571" g_stop="2317" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="255" r_length="255" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="256" polyA_stop="266"/>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E309278" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>255</cumulative_length_of_scored_exons>
        <coverage percentage="0.959" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309278" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2571" e_stop="2317"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGAGGTGCTGGAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGATATGATTGCTTGCATTTTACATATTGAA</genome_strand>
        <mrna_strand>GAGGAGGTGCTGGAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGATATGATTGCTTGCATTTTACATATTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E229933" ref_strand="+" ref_description="SGN-E229933 [cLEL-33-B13](-)">
      <seq>gagcctcaggtggtggatatggtagtgaagaaggagctggtggtggtgcagaaggagcacatggaggagcatatggtgnaggcggtggtagtggtgccggtggtggtggagcctatgccggtggagagcatgctggtggttacggaggaggtgctggaggtggtgaaggtggtggacacggtggtggctacgctccttaagcggtcattctaatctaaaagtatccatcttcttacctacactattaaaaaaataatgtactgagattgtggtaggaagatgttatatatatattggaagaaaaagaattgtagttaagtcctgcaatctttttaagtgtaatgtggtttcctttaaaagcaacattaagatatgattgcttgcattttaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="3015" stop="2022"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2715" g_stop="2325" g_length="391"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="391" r_length="391" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="392" polyA_stop="412"/>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E229933" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>391</cumulative_length_of_scored_exons>
        <coverage percentage="0.949" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E229933" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2715" e_stop="2325"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCCTCAGGTGGTGGATATGGTAGTGGAGGAGGAGCTGGTGGTGGTGCAGGAGGAGCACATGGAGGAGCATATGGTGGAGGCGGTGGTAGTGGTGCCGGTGGTGGTGGAGCCTATGCCGGTGGAGAGCATGCTGGTGGTTACGGAGGAGGTGCTGGAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGATATGATTGCTTGCATTTTAC</genome_strand>
        <mrna_strand>GAGCCTCAGGTGGTGGATATGGTAGTGAAGAAGGAGCTGGTGGTGGTGCAGAAGGAGCACATGGAGGAGCATATGGTGNAGGCGGTGGTAGTGGTGCCGGTGGTGGTGGAGCCTATGCCGGTGGAGAGCATGCTGGTGGTTACGGAGGAGGTGCTGGAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGATATGATTGCTTGCATTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E230155" ref_strand="+" ref_description="SGN-E230155 [cLEL-33-B13](-)">
      <seq>tcaggtggtgaatatggtagtgaaggaggagctggtggtggtgcagaagaagcacatgaaggagcatatggtgaagacggtggtagtggtgccggtggtggtggagcctatgccggtggagagcatgctggtggttacggaggaggtgctggaggtggtgaaggtggtggacacggtggtggctacgctccttaagcggtcattctaatctaaaagtatccatcttcttacctacactattaaaaaaataatgtactgagattgtggtaggaagatgttatatatatattggaagaaaaagaattgtagttaagtcctgcaatctttttaagtgtaatgtggtttcctttaaaagcaacattaagatatgattgcttgcattttaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="3010" stop="2022"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2710" g_stop="2325" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="386" r_length="386" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="387" polyA_stop="407"/>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E230155" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>386</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E230155" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2710" e_stop="2325"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGGTGGTGGATATGGTAGTGGAGGAGGAGCTGGTGGTGGTGCAGGAGGAGCACATGGAGGAGCATATGGTGGAGGCGGTGGTAGTGGTGCCGGTGGTGGTGGAGCCTATGCCGGTGGAGAGCATGCTGGTGGTTACGGAGGAGGTGCTGGAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGATATGATTGCTTGCATTTTAC</genome_strand>
        <mrna_strand>TCAGGTGGTGAATATGGTAGTGAAGGAGGAGCTGGTGGTGGTGCAGAAGAAGCACATGAAGGAGCATATGGTGAAGACGGTGGTAGTGGTGCCGGTGGTGGTGGAGCCTATGCCGGTGGAGAGCATGCTGGTGGTTACGGAGGAGGTGCTGGAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGATATGATTGCTTGCATTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E309751" ref_strand="+" ref_description="SGN-E309751 [cLEY-26-P1]">
      <seq>tggtggttacggaggaggtgctggaggtggtgaaggtggtggacacggtggtggctacgctccttaagcggtcattctaatctaaaagtatccatcttcttacctacactattaaaaaaataatgtactgagattgtggtaggaagatgttatatatatattggaagaaaaagaattgtagttaagtcctgcaatctttttaagtgtaatgtggtttcctttaaaagcaacattaagataaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="2882" stop="2043"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2582" g_stop="2344" g_length="239"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="239" r_length="239" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="240" polyA_stop="250"/>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E309751" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>239</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309751" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2582" e_stop="2344"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTGGTTACGGAGGAGGTGCTGGAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGAT</genome_strand>
        <mrna_strand>TGGTGGTTACGGAGGAGGTGCTGGAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E309380" ref_strand="+" ref_description="SGN-E309380 [cLEY-22-K22]">
      <seq>ggtgctggaggtggtgaaggtggtggacacggtggtggctacgctccttaagcggtcattctaatctaaaagtatccatcttcttacctacactattaaaaaaataatgtactgagattgtggtaggaagatgttatatatatattggaagaaaaagaattgtagttaagtcctgcaatctttttaagtgtaatgtggtttcctttaaaagcaacattaagataaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="2866" stop="2043"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2566" g_stop="2344" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="223" r_length="223" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="224" polyA_stop="234"/>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E309380" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>223</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309380" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2566" e_stop="2344"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGCTGGAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGAT</genome_strand>
        <mrna_strand>GGTGCTGGAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E308113" ref_strand="-" ref_description="SGN-E308113 [cLEY-14-G21]">
      <seq>cagtacattatttttttaatagtgtaggtaagaagatggatacttttatattagaatgaccgcttaaggagtgtagccaccaccgtgtccaccacattcaccacctccagcacctcgtcggtaaccaccagcatgctctcctccggcataggctccaccaccaccggcaccactaccaccgcctccaccatatgctcctccatgtgctcctcctgcaccaccaccagctcctcctccactaccatatccaccacatgaggctcctccttctcctccagcatacgcactaccaccaccgcctccatgtccacctccaccaccatatccacccccgggtgctccaccagcaccatagccgccaccagtacctcctcctgaacctccagcatgagcacctccagctccacttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="2153" stop="3337"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2453" g_stop="2838" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="386" r_length="386" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2839" i_stop="3012" i_length="174">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="3013" g_stop="3037" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="411" r_length="25" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E308113" ref_strand="-">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>411</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E308113" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="2453" e_stop="2838"/>
          <exon e_start="3013" e_stop="3037"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTACATTATTTTTTTAATAGTGTAGGTAAGAAGATGGATACTTTTAGATTAGAATGACCGCTTAAGGAGCGTAGCCACCACCGTGTCCACCACCTTCACCACCTCCAGCACCTCCTCCGTAACCACCAGCATGCTCTCCACCGGCATAGGCTCCACCACCACCGGCACCACTACCACCGCCTCCACCATATGCTCCTCCATGTGCTCCTCCTGCACCACCACCAGCTCCTCCTCCACTACCATATCCACCACCTGAGGCTCCTCCTTCTCCTCCAGCATACGCACTACCACCACCGCCTCCATGTCCACCTCCACCACCATATCCACCCCCGGGTGCTCCACCAGCACCATAGCCGCCACCAGTACCTCCTCCTGAACCTCCAGCATATGCACCGCCACCATGTGCTCCACCTCCAGCAACTGCACCACCACCTCCACCACCACTACCTCCACCACCTCCAGCAGCATATCCACCATCTGCTGACCCTGCACCACCATATCCACTACCACCACCTTCACCACCTCCAGCAGCATATCCACCATCATGTTCTCCGCCAGCATGAGCACCTCCAGCTCCACTTCC</genome_strand>
        <mrna_strand>CAGTACATTATTTTTTTAATAGTGTAGGTAAGAAGATGGATACTTTTATATTAGAATGACCGCTTAAGGAGTGTAGCCACCACCGTGTCCACCACATTCACCACCTCCAGCACCTCGTCGGTAACCACCAGCATGCTCTCCTCCGGCATAGGCTCCACCACCACCGGCACCACTACCACCGCCTCCACCATATGCTCCTCCATGTGCTCCTCCTGCACCACCACCAGCTCCTCCTCCACTACCATATCCACCACATGAGGCTCCTCCTTCTCCTCCAGCATACGCACTACCACCACCGCCTCCATGTCCACCTCCACCACCATATCCACCCCCGGGTGCTCCACCAGCACCATAGCCGCCACCAGTACCTCCTCCTGAACCTCCAG..............................................................................................................................................................................CATGAGCACCTCCAGCTCCACTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E464451" ref_strand="+" ref_description="SGN-E464451 [cPRO-18-E5]">
      <seq>gttgctggaggtggagcacatggtggtggtgcatatgctggaggttcaagaggaggtactggcggcggctatggtgctggtggggcaccagggggtggatatggtggtggaggtggacatggaggtggtggtggtagtgcttatgctggaggagaaggaggagcctcacgtggtggatatggtagtggaggacgatctggtggtggtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="3175" stop="2367"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2875" g_stop="2667" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="209" r_length="209" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E464451" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>209</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E464451" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2875" e_stop="2667"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGCTGGAGGTGGAGCACATGGTGGCGGTGCATATGCTGGAGGTTCAGGAGGAGGTACTGGTGGCGGCTATGGTGCTGGTGGAGCACCCGGGGGTGGATATGGTGGTGGAGGTGGACATGGAGGCGGTGGTGGTAGTGCGTATGCTGGAGGAGAAGGAGGAGCCTCAGGTGGTGGATATGGTAGTGGAGGAGGAGCTGGTGGTGGTGC</genome_strand>
        <mrna_strand>GTTGCTGGAGGTGGAGCACATGGTGGTGGTGCATATGCTGGAGGTTCAAGAGGAGGTACTGGCGGCGGCTATGGTGCTGGTGGGGCACCAGGGGGTGGATATGGTGGTGGAGGTGGACATGGAGGTGGTGGTGGTAGTGCTTATGCTGGAGGAGAAGGAGGAGCCTCACGTGGTGGATATGGTAGTGGAGGACGATCTGGTGGTGGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E537380" ref_strand="+" ref_description="SGN-E537380 [letfr33]">
      <seq>ccatggcgaagcttaaaattgttaacattgttttctttgtgttattaggtattggaatatgttcagccgctcgaacgctcctcacttacgatcatgttggtgttgggggtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="3729" stop="3018"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3429" g_stop="3318" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E537380" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>112</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E537380" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3429" e_stop="3318"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATGGCGAAGCTTAAAATTGTTAACATTGTTTTCTTTGTGTTATTAGGTATTGGAATATGTTCAGCCGCTCGAACGCTCCTCACTTACGATCATGTTGGTGTTGGGGGTGA</genome_strand>
        <mrna_strand>CCATGGCGAAGCTTAAAATTGTTAACATTGTTTTCTTTGTGTTATTAGGTATTGGAATATGTTCAGCCGCTCGAACGCTCCTCACTTACGATCATGTTGGTGTTGGGGGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E305101" ref_strand="+" ref_description="SGN-E305101 [cLEY-18-L1]">
      <seq>ttcgtatggactctttagctggcctctatttttagactctgatcactcaaatttagcaacttctcaactatttagaattgatagtactagaaaaaaaaaacaacctttttttcatgttttgacaaaccatatagtgacattttgtgccttgtgggataaggcagttttgaacctttattttttttcctggaagatgattgaattgttccagggatattgcatcttatgtgaacttacaaaattcagtgtagctaaaagtttttatttttggatatttcaaattttcaataggtacagtttgaacatttagctaaatttcatattgtaatttgtgtgtagttatagcagttggaaaaatatttacttatatggcaggaatatcgttacctcccggatttcgtttccatccaactgatcaggaattggttggatattacctgaaaagaaaaactgatgaacttgaaattgagttggaagttattccagtaatagatctgtacaaatttgacccatgggaccttccagagaaatctttcttgccaaaacgtgatatggaatggtacttcttctgctctcgggacaagaagtacccgaatggctcgcgaacaaatcgagccactaattctggatactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="9688" stop="11417"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9988" g_stop="10512" g_length="525"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="525" r_length="525" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10513" i_stop="11008" i_length="496">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11009" g_stop="11117" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="526" r_stop="634" r_length="109" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E305101" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>634</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E305101" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9988" e_stop="10512"/>
          <exon e_start="11009" e_stop="11117"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGTATGGACTCTTTAGCTGGCCTCTATTTTTAGACTCTGATCACTCAAATTTAGCAACTTCTCAACTATTTAGAATTGATAGTACTAGAAAAAAAAAACAACCTTTTTTTCATGTTTTGACAAACCATATAGTGACATTTTGTGCCTTGTGGGATAAGGCAGTTTTGAACCTTTATTTTTTTTCCTGGAAGATGATTGAATTGTTCCAGGGATATTGCATCTTATGTGAACTTACAAAATTCAGTGTAGCTAAAAGTTTTTATTTTTGGATATTTCAAATTTTCAATAGGTACAGTTTGAACATTTAGCTAAATTTCATATTGTAATTTGTGTGTAGTTATAGCAGTTGGAAAAATATTTACTTATATGGCAGGAATATCGTTACCTCCCGGATTTCGTTTCCATCCAACTGATCAGGAATTGGTTGGATATTACCTGAAAAGAAAAACTGATGAACTTGAAATTGAGTTGGAAGTTATTCCAGTAATAGATCTGTACAAATTTGACCCATGGGACCTTCCAGGTATACATTCTTGATCACCTCTTTCTCTTGAAAAAACTTATCTAAGCATTGACAAATATATACTCTGCGAATTGCACTCACATAGATTGCATTAGGGTAGACTGTCTACATCATATTCGCATATTAGGGTAAAACTGGGATGTTTTGTGCACCGGGCTGTCTTTTCGTGGTGGAATGTCATTGCCTTCATGTATGATATTTTCATTTGATAGGTTATGTTGTTGGAGCAAAAAGCTAAGAAATAGTGCTTTTTGCTGTTTTCATGACAATTTGAACTGAAAAATGAGTTTTTACTTTATAGCTTATCTAATCTTTTTGTCTTGTCGCAAGATGGAGTGCTCTGTGGGGTATCTCTATTTTCACACACATGCCCTAACCACATATCAAAAAGAAAGAAAAAAACATGTCTAAAAGCATCTGGTTTGGTTCATTCTTCTTGCTTATTCTGAACTTAGTATTTTGGGATATTGATAATAATCATATCTTTGAGATGCAGAGAAATCTTTCTTGCCAAAACGTGATATGGAATGGTACTTCTTCTGCTCTCGGGACAAGAAGTACCCGAATGGCTCGCGAACAAATCGAGCCACTAATTCTGGATACTG</genome_strand>
        <mrna_strand>TTCGTATGGACTCTTTAGCTGGCCTCTATTTTTAGACTCTGATCACTCAAATTTAGCAACTTCTCAACTATTTAGAATTGATAGTACTAGAAAAAAAAAACAACCTTTTTTTCATGTTTTGACAAACCATATAGTGACATTTTGTGCCTTGTGGGATAAGGCAGTTTTGAACCTTTATTTTTTTTCCTGGAAGATGATTGAATTGTTCCAGGGATATTGCATCTTATGTGAACTTACAAAATTCAGTGTAGCTAAAAGTTTTTATTTTTGGATATTTCAAATTTTCAATAGGTACAGTTTGAACATTTAGCTAAATTTCATATTGTAATTTGTGTGTAGTTATAGCAGTTGGAAAAATATTTACTTATATGGCAGGAATATCGTTACCTCCCGGATTTCGTTTCCATCCAACTGATCAGGAATTGGTTGGATATTACCTGAAAAGAAAAACTGATGAACTTGAAATTGAGTTGGAAGTTATTCCAGTAATAGATCTGTACAAATTTGACCCATGGGACCTTCCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATCTTTCTTGCCAAAACGTGATATGGAATGGTACTTCTTCTGCTCTCGGGACAAGAAGTACCCGAATGGCTCGCGAACAAATCGAGCCACTAATTCTGGATACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E273581" ref_strand="+" ref_description="SGN-E273581 [cLEN-6-L12]">
      <seq>aatttgtgtgtagttatagcagttggaaaaatatttacttatatggcaggaatatcgttacctcccggatttcgtttccatccaactgatcaggaattggttggatattacctgaaaagaaaaactgatgaacttgaaattgagttggaagttattccagtaatagatctgtacaaatttgacccatgggaccttccagagaaatctttcttgccaaaacgtgatatggaatggtacttcttctgctctcgggacaagaagtacccgaatggctcgcgaacaaatcgagccactaattctggatactggaaagcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="10014" stop="11424"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10314" g_stop="10512" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="199" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10513" i_stop="11008" i_length="496">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11009" g_stop="11124" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="315" r_length="116" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E273581" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>315</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E273581" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10314" e_stop="10512"/>
          <exon e_start="11009" e_stop="11124"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTGTGTGTAGTTATAGCAGTTGGAAAAATATTTACTTATATGGCAGGAATATCGTTACCTCCCGGATTTCGTTTCCATCCAACTGATCAGGAATTGGTTGGATATTACCTGAAAAGAAAAACTGATGAACTTGAAATTGAGTTGGAAGTTATTCCAGTAATAGATCTGTACAAATTTGACCCATGGGACCTTCCAGGTATACATTCTTGATCACCTCTTTCTCTTGAAAAAACTTATCTAAGCATTGACAAATATATACTCTGCGAATTGCACTCACATAGATTGCATTAGGGTAGACTGTCTACATCATATTCGCATATTAGGGTAAAACTGGGATGTTTTGTGCACCGGGCTGTCTTTTCGTGGTGGAATGTCATTGCCTTCATGTATGATATTTTCATTTGATAGGTTATGTTGTTGGAGCAAAAAGCTAAGAAATAGTGCTTTTTGCTGTTTTCATGACAATTTGAACTGAAAAATGAGTTTTTACTTTATAGCTTATCTAATCTTTTTGTCTTGTCGCAAGATGGAGTGCTCTGTGGGGTATCTCTATTTTCACACACATGCCCTAACCACATATCAAAAAGAAAGAAAAAAACATGTCTAAAAGCATCTGGTTTGGTTCATTCTTCTTGCTTATTCTGAACTTAGTATTTTGGGATATTGATAATAATCATATCTTTGAGATGCAGAGAAATCTTTCTTGCCAAAACGTGATATGGAATGGTACTTCTTCTGCTCTCGGGACAAGAAGTACCCGAATGGCTCGCGAACAAATCGAGCCACTAATTCTGGATACTGGAAAGCC</genome_strand>
        <mrna_strand>AATTTGTGTGTAGTTATAGCAGTTGGAAAAATATTTACTTATATGGCAGGAATATCGTTACCTCCCGGATTTCGTTTCCATCCAACTGATCAGGAATTGGTTGGATATTACCTGAAAAGAAAAACTGATGAACTTGAAATTGAGTTGGAAGTTATTCCAGTAATAGATCTGTACAAATTTGACCCATGGGACCTTCCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATCTTTCTTGCCAAAACGTGATATGGAATGGTACTTCTTCTGCTCTCGGGACAAGAAGTACCCGAATGGCTCGCGAACAAATCGAGCCACTAATTCTGGATACTGGAAAGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E211088" ref_strand="+" ref_description="SGN-E211088 [cLEC-69-H19]">
      <seq>cctcccggatttcgtttccatccaactgatcaggaattggttggatattacctgaaaagaaaaactgatgaacttgaaattgagttggaagttattccagtaatagatctgtacaaatttgacccatgggaccttccagagaaatctttcttgccaaaacgtgatatggaatggtacttcttctgctctcgggacaagaagtacccgaatggctcgcgaacaaatcgagccactaattctggatactggaaagccacagggaaagacaagaaagttgtatgtaagtctgcagttgtaagatacaggaagacactaattttttaccgcggaagaactcctctaagggataaaactgattggggaatgcatgaatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="10074" stop="11544"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10374" g_stop="10512" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10513" i_stop="11008" i_length="496">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11009" g_stop="11244" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="375" r_length="236" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E211088" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>375</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E211088" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10374" e_stop="10512"/>
          <exon e_start="11009" e_stop="11244"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCCCGGATTTCGTTTCCATCCAACTGATCAGGAATTGGTTGGATATTACCTGAAAAGAAAAACTGATGAACTTGAAATTGAGTTGGAAGTTATTCCAGTAATAGATCTGTACAAATTTGACCCATGGGACCTTCCAGGTATACATTCTTGATCACCTCTTTCTCTTGAAAAAACTTATCTAAGCATTGACAAATATATACTCTGCGAATTGCACTCACATAGATTGCATTAGGGTAGACTGTCTACATCATATTCGCATATTAGGGTAAAACTGGGATGTTTTGTGCACCGGGCTGTCTTTTCGTGGTGGAATGTCATTGCCTTCATGTATGATATTTTCATTTGATAGGTTATGTTGTTGGAGCAAAAAGCTAAGAAATAGTGCTTTTTGCTGTTTTCATGACAATTTGAACTGAAAAATGAGTTTTTACTTTATAGCTTATCTAATCTTTTTGTCTTGTCGCAAGATGGAGTGCTCTGTGGGGTATCTCTATTTTCACACACATGCCCTAACCACATATCAAAAAGAAAGAAAAAAACATGTCTAAAAGCATCTGGTTTGGTTCATTCTTCTTGCTTATTCTGAACTTAGTATTTTGGGATATTGATAATAATCATATCTTTGAGATGCAGAGAAATCTTTCTTGCCAAAACGTGATATGGAATGGTACTTCTTCTGCTCTCGGGACAAGAAGTACCCGAATGGCTCGCGAACAAATCGAGCCACTAATTCTGGATACTGGAAAGCCACAGGGAAAGACAAGAAAGTTGTATGTAAGTCTGCAGTTGTAGGATACAGGAAGACACTAGTTTTTTACCGCGGAAGAGCTCCTCTAGGGGATAGAACTGATTGGGTAATGCATGAATAT</genome_strand>
        <mrna_strand>CCTCCCGGATTTCGTTTCCATCCAACTGATCAGGAATTGGTTGGATATTACCTGAAAAGAAAAACTGATGAACTTGAAATTGAGTTGGAAGTTATTCCAGTAATAGATCTGTACAAATTTGACCCATGGGACCTTCCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATCTTTCTTGCCAAAACGTGATATGGAATGGTACTTCTTCTGCTCTCGGGACAAGAAGTACCCGAATGGCTCGCGAACAAATCGAGCCACTAATTCTGGATACTGGAAAGCCACAGGGAAAGACAAGAAAGTTGTATGTAAGTCTGCAGTTGTAAGATACAGGAAGACACTAATTTTTTACCGCGGAAGAACTCCTCTAAGGGATAAAACTGATTGGGGAATGCATGAATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E486512" ref_strand="+" ref_description="SGN-E486512 [cSTE-22-K6]">
      <seq>gctctttgtcgtgtcatcaagagaaaggacaacatttcatcgaagacgagtgatgttcatgaaggtacagtctttaaacaggttgaattcagttcaagtatcgaaggttttgcctcaacggtagccttaaatgaaccccttgccctttctgatgacatgccaactccagctacatacgtgtccggtaacagcaactactcaactcctattaattctccctataagacaacacaagtagaggactatgactctacaaacctctggatgtctcagaatatggttcttgatccttcaaaggtattgatgttgttcctttttctatgcattggttcatgtcttttctatgaacttcatactaatattttggtggctgtatataggaatgtcctcaaggaagaagtatatctggaaactatccccatatgttctctaactcaacttcatggcagccaagtgatcaatatgacttcacatcaacttcatcttttccgaattttagaggggacgttgaactttctggtgatctcagtggctatggcaatgtatctcccttctcagtccatggaagctacatggagttctatggcaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="11080" stop="12270"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11380" g_stop="11970" g_length="591"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="591" r_length="591" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E486512" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E486512" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11380" e_stop="11970"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTCTTTGTCGTGTCATCAAGAGAAAGGACAACATTCCATCGAAGACAAGTGATGTTCATGGAGGTACAGTTTTCAAACAAGTTGAATGCAGTTCAAGCATAGAAGGTTTTACCTCAACGGTAGCCTTAAATGAACCCCTTCTACTTTCTAATGACATGCCAACTCCATCTACATACATGTCCGGTAACAGCAACTATTCAACTCCTACTAATTCTCCTTATAAGATAACACAAATAGAGGACTATGACTCTGCAAACCTCTGGATGCCTCAGAATAAGGTTCTTGATCCTTCAAAGGTATTGATGTTGTTCCTTTTTCTATGCATTTCTTCATGTTTTTTCTATGAACTTCATACTAATATCTTGGTGGCTGTATATAGGAATGTCCTCAAGGAAGAAGTATATCTGGAAACTATCCCCATATGTTCTCAAACTCAACTTCATGGCAGCCAAGTGATCAGTATGACTTCACATCAAGTTCATCTTTCCCGAATTTTAGAGGGGAAGTTGAACTTTCTGGTGATCTCAGTGGCTATGGCAATGTATCTCCCTTCTCAGTCGACGGAAGCTGCATGGAGTTCTATGGAAGTG</genome_strand>
        <mrna_strand>GCTCTTTGTCGTGTCATCAAGAGAAAGGACAACATTTCATCGAAGACGAGTGATGTTCATGAAGGTACAGTCTTTAAACAGGTTGAATTCAGTTCAAGTATCGAAGGTTTTGCCTCAACGGTAGCCTTAAATGAACCCCTTGCCCTTTCTGATGACATGCCAACTCCAGCTACATACGTGTCCGGTAACAGCAACTACTCAACTCCTATTAATTCTCCCTATAAGACAACACAAGTAGAGGACTATGACTCTACAAACCTCTGGATGTCTCAGAATATGGTTCTTGATCCTTCAAAGGTATTGATGTTGTTCCTTTTTCTATGCATTGGTTCATGTCTTTTCTATGAACTTCATACTAATATTTTGGTGGCTGTATATAGGAATGTCCTCAAGGAAGAAGTATATCTGGAAACTATCCCCATATGTTCTCTAACTCAACTTCATGGCAGCCAAGTGATCAATATGACTTCACATCAACTTCATCTTTTCCGAATTTTAGAGGGGACGTTGAACTTTCTGGTGATCTCAGTGGCTATGGCAATGTATCTCCCTTCTCAGTCCATGGAAGCTACATGGAGTTCTATGGCAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E427345" ref_strand="+" ref_description="SGN-E427345 [STM-48-E10]">
      <seq>gctctttgtcgtgtcatcaagagaaaggacaacatttcatcgaagacgagtgatgttcatgaaggtacagtctttaaacaggttgaattcagttcaagtatcgaaggttttgcctcaacggtagccttaaatgaaccccttgccctttctgatgacatgccaactccagctacatacgtgtccggtaacagcaactactcaactcctattaattctccctataagacaacacaagtagaggactatgactctacaaacctctggatgtctcagaatatggttcttgatccttcaaaggtattgatgttgttcctttttctatgcattggttcatgtcttttctatgaacttcatactaatattttggtggctgtatataggaatgtcctcaaggaagaagtatatctggaaactatccccatatgttctctaactcaacttcatggcagccaagtgatcaatatgacttcacatcaacttcatctttcccgaattttagaggggacgttgaactttctggtgatctcagtggctatggcaatgtatctcccttctcagtccatggaagctaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="11080" stop="12252"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11380" g_stop="11952" g_length="573"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="573" r_length="573" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E427345" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E427345" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11380" e_stop="11952"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTCTTTGTCGTGTCATCAAGAGAAAGGACAACATTCCATCGAAGACAAGTGATGTTCATGGAGGTACAGTTTTCAAACAAGTTGAATGCAGTTCAAGCATAGAAGGTTTTACCTCAACGGTAGCCTTAAATGAACCCCTTCTACTTTCTAATGACATGCCAACTCCATCTACATACATGTCCGGTAACAGCAACTATTCAACTCCTACTAATTCTCCTTATAAGATAACACAAATAGAGGACTATGACTCTGCAAACCTCTGGATGCCTCAGAATAAGGTTCTTGATCCTTCAAAGGTATTGATGTTGTTCCTTTTTCTATGCATTTCTTCATGTTTTTTCTATGAACTTCATACTAATATCTTGGTGGCTGTATATAGGAATGTCCTCAAGGAAGAAGTATATCTGGAAACTATCCCCATATGTTCTCAAACTCAACTTCATGGCAGCCAAGTGATCAGTATGACTTCACATCAAGTTCATCTTTCCCGAATTTTAGAGGGGAAGTTGAACTTTCTGGTGATCTCAGTGGCTATGGCAATGTATCTCCCTTCTCAGTCGACGGAAGCTGCA</genome_strand>
        <mrna_strand>GCTCTTTGTCGTGTCATCAAGAGAAAGGACAACATTTCATCGAAGACGAGTGATGTTCATGAAGGTACAGTCTTTAAACAGGTTGAATTCAGTTCAAGTATCGAAGGTTTTGCCTCAACGGTAGCCTTAAATGAACCCCTTGCCCTTTCTGATGACATGCCAACTCCAGCTACATACGTGTCCGGTAACAGCAACTACTCAACTCCTATTAATTCTCCCTATAAGACAACACAAGTAGAGGACTATGACTCTACAAACCTCTGGATGTCTCAGAATATGGTTCTTGATCCTTCAAAGGTATTGATGTTGTTCCTTTTTCTATGCATTGGTTCATGTCTTTTCTATGAACTTCATACTAATATTTTGGTGGCTGTATATAGGAATGTCCTCAAGGAAGAAGTATATCTGGAAACTATCCCCATATGTTCTCTAACTCAACTTCATGGCAGCCAAGTGATCAATATGACTTCACATCAACTTCATCTTTCCCGAATTTTAGAGGGGACGTTGAACTTTCTGGTGATCTCAGTGGCTATGGCAATGTATCTCCCTTCTCAGTCCATGGAAGCTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E427346" ref_strand="+" ref_description="SGN-E427346 [STM-48-E10]">
      <seq>gcttaattctatctaagagattcagctactaactttaccatttccctgtgagatcattgaaaaacaattatcacttgatctctcatacttcaatgacaaaacaccagctagatttaaacttatgaaactaaactcgaagatgatgtaataagattgaatgactctaagacggacattaaaaagctgttgtctcagagaacaactttagattatttcagtagcacatttagttgcatttacctattcttagtagatttttacatcagactacttatattatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="12668" stop="11787"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12368" g_stop="12087" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="281" r_length="281" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E427346" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>282</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E427346" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12368" e_stop="12087"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTAATTCTATCCAAGAGATTCAGCTACTAACTTTACCATTTTTCTGTGAGATCATTAAAAAACGATCATCACTTGGTATCTCATACTTCAATGACAAAACATCAGCTAGATTTGAACTTAGGAAACTAAACTCGAAGGTGATGTAATAAGATCAAATGACTCTTTAAGACAGACATTAAAAAGCTGTAGTCTCAGAGAACAACTTCAGATTATTTCAGTAGCATATTTAGTTGCATTTACCTATTCTTAGTAGATTCTTACATCA-ACTACTTACATTATC</genome_strand>
        <mrna_strand>GCTTAATTCTATCTAAGAGATTCAGCTACTAACTTTACCATTTCCCTGTGAGATCATTGAAAAACAATTATCACTTGATCTCTCATACTTCAATGACAAAACACCAGCTAGATTTAAACTTATGAAACTAAACTCGAAGATGATGTAATAAGATTGAATGACTC--TAAGACGGACATTAAAAAGCTGTTGTCTCAGAGAACAACTTTAGATTATTTCAGTAGCACATTTAGTTGCATTTACCTATTCTTAGTAGATTTTTACATCAGACTACTTATATTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E220747" ref_strand="+" ref_description="SGN-E220747 [cLEL-22-C17](-)">
      <seq>tgttgttgataaagttcttgtattttgtagtccacaaattgcgagcatatattgattcctcatgttttccataaagtttttggtctttttggcgaatatggatgtcaaaactaattacgagtcttagtgatggaagtgactagaaaaatgtgaattaatatgttaggtcataaaatgaagagaatccttagcaatgataaagttgtccttctataggtcacagattcgagtgatggatcagccgctgaccctttgagtatagcccttccctgatcgatccctgcatgaacacgggtgcaccgtgctacctttataagccaggtcataagatgtagcactgtaaatttcaattttttttgtacagagatggatgcgccaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="14816" stop="13838"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14516" g_stop="14146" g_length="371"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="372" r_length="372" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="378" polyA_stop="395"/>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E220747" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>371</cumulative_length_of_scored_exons>
        <coverage percentage="0.939" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E220747" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14516" e_stop="14146"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTGTTGATGAAGTTCTTGTATTTTGTAGTCCACAAATTGCTAGCTTATATTGATTCTTCATGTTTTCCATGAAGTTTTTGGTCTTTTTGGCGAATATGGATGTCAAAACTAATTACAAGTCTTAGTGATGGAAGTGACTAGAAAAATGTGAATTAATATGCTAGGTCATAAAATGAAGAGAATCCTTAGCAATGATAAAGTTGTCCTTCTATAGGTCACAGATTCGAGTGATGGATCAGCCACTGACCCTTTGAGTATAGCCCTTCCCTGATCGATCCCTGCATGAACACGGGTGCACCGTGCTACCTTTATATACCAGGTCATAAGATGTAGCACTGTAAATTTCAA-TTTTTTTGTACAGAGATGGAT</genome_strand>
        <mrna_strand>TGTTGTTGATAAAGTTCTTGTATTTTGTAGTCCACAAATTGCGAGCATATATTGATTCCTCATGTTTTCCATAAAGTTTTTGGTCTTTTTGGCGAATATGGATGTCAAAACTAATTACGAGTCTTAGTGATGGAAGTGACTAGAAAAATGTGAATTAATATGTTAGGTCATAAAATGAAGAGAATCCTTAGCAATGATAAAGTTGTCCTTCTATAGGTCACAGATTCGAGTGATGGATCAGCCGCTGACCCTTTGAGTATAGCCCTTCCCTGATCGATCCCTGCATGAACACGGGTGCACCGTGCTACCTTTATAAGCCAGGTCATAAGATGTAGCACTGTAAATTTCAATTTTTTTTGTACAGAGATGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E687623" ref_strand="+" ref_description="SGN-E687623 [T3_tus_79_C03]">
      <seq>ccttgaaaaaaaggtaaaggaaggagagtggtcactctgcctttaccatgagttgctccatagcaatactaaattctatatccactccttattttaataaatattgtacaagaagcttatttaaatggaattttgggaaaaataacaagattgatgataagccacaatttacatatcatgatcttgatctcccttttcctccttccctcctcaccaaaacattcttgaaaggaagggaactgaaatgctgctataaggcctcagtggatggatttagtgcgactgaattccataacagatctgatttcaaaggaccatgtgtgatcattggctacacaacagaggcctttaagtttggagcgtttaatccagaaggctacagaagcacagatgattattacgacacttttgatgcatttctgttttattgggatgaagatgttgaaaaaccaataatgttgcctaaagtagggggaagtggtgctgctctatttgattatgctagaggaggtccacagtttggtgctgatggattgctcattggtcctccattggctcctgtcatgggtggatttgctggacctgatacgaattctggagtgggtgatttaaggcaagctaaatcaagattgggactttcctatgctaaaaggcctgatggtaaagaatcattgtttggagatgagtctaaggctgttgttgatgaagttcttgtattttggagtccacaaattgctagcttatattgattcttcatgttttccatgaagtttttggtctttttgggcaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="16051" stop="14119"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15755" g_stop="15525" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="231" r_length="231" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15524" i_stop="14980" i_length="545">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14979" g_stop="14404" g_length="576"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="807" r_length="576" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E687623" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>807</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E687623" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15755" e_stop="15525"/>
          <exon e_start="14979" e_stop="14404"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGAAATAAAGGTAAAGGAAGGAGAGTGGTCACTCTGCTTCAGCCATGAGTTGCTCCATAGCAATACTAAATTCTATATCCACTCCTTATTTTAATAAATATTGTACAAGAAGCTTATTTAAATGGAATTTTGGGAAAAATAACAAGATTGATGATAAGCCACAATTTACATATCATGATCTTGATCTCCCTTTTCCTCCTTCCCTCCTCACCAAAACATTCTTGAAAGGTACTTATTCTATTCCTTCTCTTTTACATGATAAAAGAAATGGGAAAAAACTCAGGGGCGGATCCAAAATTTAGACGTTGTGGATTCTTGAAATATATATCTAATCAAGGTGGAACCAATGTTTTGAGTTTATTATGAGTTATGAACTCTAAAAAAAGTACCTTATTGGGTTCCGGATGAGTTATTTATACATATTAAGTGAATTTCTTAACGCAAATACAAGATTTCTACTAAAGCTATGAGTTACATCGAACTTTTAGCTCTCTCTAGCTCTGTCCTTGTAGCTAATACTATCTATACTTAATCTTGTCGTGCTTGTATTTTTTTATTAATAGTGGTGAATGTAGCCTAATGCTGCTGGTTCATCCAAGTAGTGAGTTCAGTATTAAAATTGTAAAGGTTGAGTTCATCAAGTTAATATATATAGTGTTTGACCTAAAAACATTGAATTCTGTTGAATTCGCGAACCTATTGTTAGGTCTTTCACTGACAAGAGTTCCATGCATGTTCTTTAATTTATAATTTGGATGATGATCAATACGCAGGAAGGGAACTGAAATGCTGCTATAAGGCCTCAGTGGATGGATTTAGTGCGACTGAATTCCATAACAGATCTGATTTCAAAGGACCATGTGTGATCATTGGCTACACAACAGAGGCCTTTAAGTTTGGAGCGTTTAATCCAGAAGGCTACAGAAGCACAGATGATTATTACGACACTTTTGATGCATTTCTGTTTTATTGGGATGAAGATGTTGAAAAACCAATAATGTTGCCTAAAGTAGGGGGAAGTGGTGCTGCTCTATTTGATTATGCTAGAGGAGGTCCACAGTTTGGTGCTGATGGATTGCTCATTGGTCCTCCATTGGCTCCTGTCATGGGTGGATTTGCTGGACCTGATACGAATTCTGGAGTGGGTGATTTAAGGCAAGCTAAATCAAGATTGGGACTTTCCTATGCTAAAAGGCCTGATGGTAAAGAATCATTGTTTGGAGATGAGTCTAAGGCTGTTGTTGATGAAGTTCTTGTATTTTGTAGTCCACAAATTGCTAGCTTATATTGATTCTTCATGTTTTCCATGAAGTTTTTGGTCTTTTTGGCGAATATGGATGTCAAAACTA</genome_strand>
        <mrna_strand>CCTTGAAAAAAAGGTAAAGGAAGGAGAGTGGTCACTCTGCCTTTACCATGAGTTGCTCCATAGCAATACTAAATTCTATATCCACTCCTTATTTTAATAAATATTGTACAAGAAGCTTATTTAAATGGAATTTTGGGAAAAATAACAAGATTGATGATAAGCCACAATTTACATATCATGATCTTGATCTCCCTTTTCCTCCTTCCCTCCTCACCAAAACATTCTTGAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGGAACTGAAATGCTGCTATAAGGCCTCAGTGGATGGATTTAGTGCGACTGAATTCCATAACAGATCTGATTTCAAAGGACCATGTGTGATCATTGGCTACACAACAGAGGCCTTTAAGTTTGGAGCGTTTAATCCAGAAGGCTACAGAAGCACAGATGATTATTACGACACTTTTGATGCATTTCTGTTTTATTGGGATGAAGATGTTGAAAAACCAATAATGTTGCCTAAAGTAGGGGGAAGTGGTGCTGCTCTATTTGATTATGCTAGAGGAGGTCCACAGTTTGGTGCTGATGGATTGCTCATTGGTCCTCCATTGGCTCCTGTCATGGGTGGATTTGCTGGACCTGATACGAATTCTGGAGTGGGTGATTTAAGGCAAGCTAAATCAAGATTGGGACTTTCCTATGCTAAAAGGCCTGATGGTAAAGAATCATTGTTTGGAGATGAGTCTAAGGCTGTTGTTGATGAAGTTCTTGTATTTTGGAGTCCACAAATTGCTAGCTTATATTGATTCTTCATGTTTTCCATGAAGTTTTTGGTCTTTTTGGGCAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E295575" ref_strand="+" ref_description="SGN-E295575 [cLET-23-D14]">
      <seq>aagattgatgataagccacaatttacatatcatgatcttgatctcccttggcctccttccctcctcaccaaaacattcttgaaaggaagggaactgaaatgctgctataaggcctcagtggatggatttagtgcgactgaattccataacagatctgatttcaaaggaccatgtgtgatcattggctacacaacagaggcctttaagtttggagcgtttaatccagaaggctacagaagcacagatgattattacgacacttttgatgcatttctgttttattgggatgaagatgttgaaaaaccaataatgttgcctaaagtagggggaagtggtgctgctctatttgattatgctagaggaggtccacagtttggtgctgatggattgctcattggtcctccattggctcctgtcatgggtggatttgctggacctgatacgaattctggagtgggtgatttaaggcaagctaaatcaagattgggactttcctatgctaaaaggcctgatggtaaagaatcattgtttggaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="15909" stop="14229"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15609" g_stop="15525" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15524" i_stop="14980" i_length="545">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14979" g_stop="14529" g_length="451"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="536" r_length="451" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E295575" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E295575" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15609" e_stop="15525"/>
          <exon e_start="14979" e_stop="14529"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATTGATGATAAGCCACAATTTACATATCATGATCTTGATCTCCCTTTTCCTCCTTCCCTCCTCACCAAAACATTCTTGAAAGGTACTTATTCTATTCCTTCTCTTTTACATGATAAAAGAAATGGGAAAAAACTCAGGGGCGGATCCAAAATTTAGACGTTGTGGATTCTTGAAATATATATCTAATCAAGGTGGAACCAATGTTTTGAGTTTATTATGAGTTATGAACTCTAAAAAAAGTACCTTATTGGGTTCCGGATGAGTTATTTATACATATTAAGTGAATTTCTTAACGCAAATACAAGATTTCTACTAAAGCTATGAGTTACATCGAACTTTTAGCTCTCTCTAGCTCTGTCCTTGTAGCTAATACTATCTATACTTAATCTTGTCGTGCTTGTATTTTTTTATTAATAGTGGTGAATGTAGCCTAATGCTGCTGGTTCATCCAAGTAGTGAGTTCAGTATTAAAATTGTAAAGGTTGAGTTCATCAAGTTAATATATATAGTGTTTGACCTAAAAACATTGAATTCTGTTGAATTCGCGAACCTATTGTTAGGTCTTTCACTGACAAGAGTTCCATGCATGTTCTTTAATTTATAATTTGGATGATGATCAATACGCAGGAAGGGAACTGAAATGCTGCTATAAGGCCTCAGTGGATGGATTTAGTGCGACTGAATTCCATAACAGATCTGATTTCAAAGGACCATGTGTGATCATTGGCTACACAACAGAGGCCTTTAAGTTTGGAGCGTTTAATCCAGAAGGCTACAGAAGCACAGATGATTATTACGACACTTTTGATGCATTTCTGTTTTATTGGGATGAAGATGTTGAAAAACCAATAATGTTGCCTAAAGTAGGGGGAAGTGGTGCTGCTCTATTTGATTATGCTAGAGGAGGTCCACAGTTTGGTGCTGATGGATTGCTCATTGGTCCTCCATTGGCTCCTGTCATGGGTGGATTTGCTGGACCTGATACGAATTCTGGAGTGGGTGATTTAAGGCAAGCTAAATCAAGATTGGGACTTTCCTATGCTAAAAGGCCTGATGGTAAAGAATCATTGTTTGGAGA</genome_strand>
        <mrna_strand>AAGATTGATGATAAGCCACAATTTACATATCATGATCTTGATCTCCCTTGGCCTCCTTCCCTCCTCACCAAAACATTCTTGAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGGAACTGAAATGCTGCTATAAGGCCTCAGTGGATGGATTTAGTGCGACTGAATTCCATAACAGATCTGATTTCAAAGGACCATGTGTGATCATTGGCTACACAACAGAGGCCTTTAAGTTTGGAGCGTTTAATCCAGAAGGCTACAGAAGCACAGATGATTATTACGACACTTTTGATGCATTTCTGTTTTATTGGGATGAAGATGTTGAAAAACCAATAATGTTGCCTAAAGTAGGGGGAAGTGGTGCTGCTCTATTTGATTATGCTAGAGGAGGTCCACAGTTTGGTGCTGATGGATTGCTCATTGGTCCTCCATTGGCTCCTGTCATGGGTGGATTTGCTGGACCTGATACGAATTCTGGAGTGGGTGATTTAAGGCAAGCTAAATCAAGATTGGGACTTTCCTATGCTAAAAGGCCTGATGGTAAAGAATCATTGTTTGGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E322664" ref_strand="+" ref_description="SGN-E322664 [cTOB-26-M12]">
      <seq>agaaataaaggtaaaggaaggagagtggtcactctgcttcagccatgagttgctccatagcaatactaaattctatatccactccttattttaataaatattgtacaagaagcttatttaaatggaattttgggaaaaataacaagattgatgataagccacaatttacatatcatgatcttgatctcccttttcctccttccctcctcaccaaaacattcttgaaaggaagggaactgaaatgctgctataaggcctcagtggatggatttagtgcgactgaattccataacagatctgatttcaaaggaccatgtgtgatcattggctacacaacagaggcctttaagtttggagcgtttaatccagaaggctacagaagcacagatgattattacgacacttttgatgcatttctgttttattgggatgaagatgttgaaaaaccaataatgttgcctaaagtagggggaagtggtgctgctctatttgattatgctagaggaggtccacagtttggtgctgatggattgctcattggtccctccattggctcctgtcatgggtggatttgctggacctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="16052" stop="14326"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15752" g_stop="15525" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="228" r_length="228" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15524" i_stop="14980" i_length="545">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14979" g_stop="14626" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="583" r_length="355" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E322664" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>582</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E322664" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15752" e_stop="15525"/>
          <exon e_start="14979" e_stop="14626"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATAAAGGTAAAGGAAGGAGAGTGGTCACTCTGCTTCAGCCATGAGTTGCTCCATAGCAATACTAAATTCTATATCCACTCCTTATTTTAATAAATATTGTACAAGAAGCTTATTTAAATGGAATTTTGGGAAAAATAACAAGATTGATGATAAGCCACAATTTACATATCATGATCTTGATCTCCCTTTTCCTCCTTCCCTCCTCACCAAAACATTCTTGAAAGGTACTTATTCTATTCCTTCTCTTTTACATGATAAAAGAAATGGGAAAAAACTCAGGGGCGGATCCAAAATTTAGACGTTGTGGATTCTTGAAATATATATCTAATCAAGGTGGAACCAATGTTTTGAGTTTATTATGAGTTATGAACTCTAAAAAAAGTACCTTATTGGGTTCCGGATGAGTTATTTATACATATTAAGTGAATTTCTTAACGCAAATACAAGATTTCTACTAAAGCTATGAGTTACATCGAACTTTTAGCTCTCTCTAGCTCTGTCCTTGTAGCTAATACTATCTATACTTAATCTTGTCGTGCTTGTATTTTTTTATTAATAGTGGTGAATGTAGCCTAATGCTGCTGGTTCATCCAAGTAGTGAGTTCAGTATTAAAATTGTAAAGGTTGAGTTCATCAAGTTAATATATATAGTGTTTGACCTAAAAACATTGAATTCTGTTGAATTCGCGAACCTATTGTTAGGTCTTTCACTGACAAGAGTTCCATGCATGTTCTTTAATTTATAATTTGGATGATGATCAATACGCAGGAAGGGAACTGAAATGCTGCTATAAGGCCTCAGTGGATGGATTTAGTGCGACTGAATTCCATAACAGATCTGATTTCAAAGGACCATGTGTGATCATTGGCTACACAACAGAGGCCTTTAAGTTTGGAGCGTTTAATCCAGAAGGCTACAGAAGCACAGATGATTATTACGACACTTTTGATGCATTTCTGTTTTATTGGGATGAAGATGTTGAAAAACCAATAATGTTGCCTAAAGTAGGGGGAAGTGGTGCTGCTCTATTTGATTATGCTAGAGGAGGTCCACAGTTTGGTGCTGATGGATTGCTCATTGGT-CCTCCATTGGCTCCTGTCATGGGTGGATTTGCTGGACCTG</genome_strand>
        <mrna_strand>AGAAATAAAGGTAAAGGAAGGAGAGTGGTCACTCTGCTTCAGCCATGAGTTGCTCCATAGCAATACTAAATTCTATATCCACTCCTTATTTTAATAAATATTGTACAAGAAGCTTATTTAAATGGAATTTTGGGAAAAATAACAAGATTGATGATAAGCCACAATTTACATATCATGATCTTGATCTCCCTTTTCCTCCTTCCCTCCTCACCAAAACATTCTTGAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGGAACTGAAATGCTGCTATAAGGCCTCAGTGGATGGATTTAGTGCGACTGAATTCCATAACAGATCTGATTTCAAAGGACCATGTGTGATCATTGGCTACACAACAGAGGCCTTTAAGTTTGGAGCGTTTAATCCAGAAGGCTACAGAAGCACAGATGATTATTACGACACTTTTGATGCATTTCTGTTTTATTGGGATGAAGATGTTGAAAAACCAATAATGTTGCCTAAAGTAGGGGGAAGTGGTGCTGCTCTATTTGATTATGCTAGAGGAGGTCCACAGTTTGGTGCTGATGGATTGCTCATTGGTCCCTCCATTGGCTCCTGTCATGGGTGGATTTGCTGGACCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E290161" ref_strand="+" ref_description="SGN-E290161 [cLET-5-C13]">
      <seq>agaaataaaggtaaaggaaggagagtggtcactctgcttcagccatgagttgctccatagcaatactaaattctatatccactccttattttaataaatattgtacaagaagcttatttaaatggaattttgggaaaaataacaagattgatgataagccacaatttacatatcatgatcttgatctcccttttcctccttccctcctcaccaaaacattcttgaaaggaagggaactgaaatgctgctataaggcctcagtggatggatttagtgcgactgaattccataacagatctgatttcaaaggaccatgtgtgatcattggctacacaacagaggcctttaagtttggagcgtttaatccagaaggctacagaagcacagatgattattacgacacttttgatgcatttctgttttattgggatgaagatgttgaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="16052" stop="14461"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15752" g_stop="15525" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="228" r_length="228" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15524" i_stop="14980" i_length="545">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14979" g_stop="14761" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="447" r_length="219" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E290161" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E290161" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15752" e_stop="15525"/>
          <exon e_start="14979" e_stop="14761"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATAAAGGTAAAGGAAGGAGAGTGGTCACTCTGCTTCAGCCATGAGTTGCTCCATAGCAATACTAAATTCTATATCCACTCCTTATTTTAATAAATATTGTACAAGAAGCTTATTTAAATGGAATTTTGGGAAAAATAACAAGATTGATGATAAGCCACAATTTACATATCATGATCTTGATCTCCCTTTTCCTCCTTCCCTCCTCACCAAAACATTCTTGAAAGGTACTTATTCTATTCCTTCTCTTTTACATGATAAAAGAAATGGGAAAAAACTCAGGGGCGGATCCAAAATTTAGACGTTGTGGATTCTTGAAATATATATCTAATCAAGGTGGAACCAATGTTTTGAGTTTATTATGAGTTATGAACTCTAAAAAAAGTACCTTATTGGGTTCCGGATGAGTTATTTATACATATTAAGTGAATTTCTTAACGCAAATACAAGATTTCTACTAAAGCTATGAGTTACATCGAACTTTTAGCTCTCTCTAGCTCTGTCCTTGTAGCTAATACTATCTATACTTAATCTTGTCGTGCTTGTATTTTTTTATTAATAGTGGTGAATGTAGCCTAATGCTGCTGGTTCATCCAAGTAGTGAGTTCAGTATTAAAATTGTAAAGGTTGAGTTCATCAAGTTAATATATATAGTGTTTGACCTAAAAACATTGAATTCTGTTGAATTCGCGAACCTATTGTTAGGTCTTTCACTGACAAGAGTTCCATGCATGTTCTTTAATTTATAATTTGGATGATGATCAATACGCAGGAAGGGAACTGAAATGCTGCTATAAGGCCTCAGTGGATGGATTTAGTGCGACTGAATTCCATAACAGATCTGATTTCAAAGGACCATGTGTGATCATTGGCTACACAACAGAGGCCTTTAAGTTTGGAGCGTTTAATCCAGAAGGCTACAGAAGCACAGATGATTATTACGACACTTTTGATGCATTTCTGTTTTATTGGGATGAAGATGTTGAAAAAC</genome_strand>
        <mrna_strand>AGAAATAAAGGTAAAGGAAGGAGAGTGGTCACTCTGCTTCAGCCATGAGTTGCTCCATAGCAATACTAAATTCTATATCCACTCCTTATTTTAATAAATATTGTACAAGAAGCTTATTTAAATGGAATTTTGGGAAAAATAACAAGATTGATGATAAGCCACAATTTACATATCATGATCTTGATCTCCCTTTTCCTCCTTCCCTCCTCACCAAAACATTCTTGAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGGAACTGAAATGCTGCTATAAGGCCTCAGTGGATGGATTTAGTGCGACTGAATTCCATAACAGATCTGATTTCAAAGGACCATGTGTGATCATTGGCTACACAACAGAGGCCTTTAAGTTTGGAGCGTTTAATCCAGAAGGCTACAGAAGCACAGATGATTATTACGACACTTTTGATGCATTTCTGTTTTATTGGGATGAAGATGTTGAAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E541570" ref_strand="+" ref_description="SGN-E541570 [TUS-62-G21]">
      <seq>gttcgagtagtattcaaagatccatgcattcgacttgccagagaagtgacaacgacactaaaggaactaggcgatagcatacgaaatcgtcgtaaatactgcccagaaatcccatctaatcatgtcaatgaagccttacaagacctcatcgacgcattaaaatcccagccaagactctttctcggcacaaatagtaatacaaacatactattagccttagccacattggccactaggcaaaaatcaggtaaagattttgtagcctctttatcaagtgtaaataatgacgatcctgctcgtcttggacttagccatgataaaaagagtttgaggcctacattaagcaagataggcatgactagcttggaatttttggaggccttaccatttgcagcttttgcatctttgttagttgagattgttgcaagacttgatcttgttattgaacaagtagtggaattgggaagagttgcgcaatttaaggaatatagtcatgatgatgtggttattaatgtaagttgtgataataatcctagagtgggaaatgagttcccctcctcccatacagcaacagattgagtactctagactttagtggctacattttttcagtagtcaaatgatatatatgcattatttagtgatgaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="17632" stop="16386"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17332" g_stop="16671" g_length="662"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="662" r_length="662" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E541570" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E541570" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17332" e_stop="16671"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCGAGTAGTATTCAAAGATCCATGCATTCGACTTGCCAGAGAAGTGACAACGACACTAAAGGAACTAGGCGATAGCATACGAAATCGTCGTAAATACTGCCCAGAAATCCCATCTAATCATGTCAATGAAGCCTTACAAGACCTCATCGACGCATTAAAATCCCAGCCAAGACTCTTTCTCGGCACAAATAGTAATACAAACATACTATTAGCCTTAGCCACATTGGCCACTAGGCAAAAATCAGGTAAAGATTTTGTAGCCTCTTTATCAAGTGTAAATAATGACGATCCTGCTCGTCTTGGACTTAGCCATGATAAAAAGAGTTTGAGGCCTACATTAAGCAAGATAGGCATGACTAGCTTGGAATTTTTGGAGGCCTTACCATTTGCAGCTTTTGCATCTTTGTTAGTTGAGATTGTTGCAAGACTTGATCTTGTTATTGAACAAGTAGTGGAATTGGGAAGAGTTGCGCAATTTAAGGAATATAGTCATGATGATGTGGTTATTAATGTAAGTTGTGATAATAATCCTAGAGTGGGAAATGAGTTCCCCTCCTCCCATACAGCAACAGATTGAGTACTCTAGACTTTAGTGGCTACATTTTTTCAGTAGTCAAATGATATATATGCATTATTTAGTGATGAGGGATACTGTATACG</genome_strand>
        <mrna_strand>GTTCGAGTAGTATTCAAAGATCCATGCATTCGACTTGCCAGAGAAGTGACAACGACACTAAAGGAACTAGGCGATAGCATACGAAATCGTCGTAAATACTGCCCAGAAATCCCATCTAATCATGTCAATGAAGCCTTACAAGACCTCATCGACGCATTAAAATCCCAGCCAAGACTCTTTCTCGGCACAAATAGTAATACAAACATACTATTAGCCTTAGCCACATTGGCCACTAGGCAAAAATCAGGTAAAGATTTTGTAGCCTCTTTATCAAGTGTAAATAATGACGATCCTGCTCGTCTTGGACTTAGCCATGATAAAAAGAGTTTGAGGCCTACATTAAGCAAGATAGGCATGACTAGCTTGGAATTTTTGGAGGCCTTACCATTTGCAGCTTTTGCATCTTTGTTAGTTGAGATTGTTGCAAGACTTGATCTTGTTATTGAACAAGTAGTGGAATTGGGAAGAGTTGCGCAATTTAAGGAATATAGTCATGATGATGTGGTTATTAATGTAAGTTGTGATAATAATCCTAGAGTGGGAAATGAGTTCCCCTCCTCCCATACAGCAACAGATTGAGTACTCTAGACTTTAGTGGCTACATTTTTTCAGTAGTCAAATGATATATATGCATTATTTAGTGATGAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E298409" ref_strand="+" ref_description="SGN-E298409 [cLET-41-J8]">
      <seq>ttcgagtagtattcaaagatccatgcattcgacttgccagagaagtgacaacgacactaaaggaactaggcgatagcatacgaaatcgtcgtaaatactgcccagaaatcccatctaatcatgtcaatgaagccttacaagacctcatcgacgcattaaaatcccagccaagactctttctcggcacaaatagtaatacaaacatactattagccttagccacattggccactaggcaaaaatcaggtaaagattttgtagcctctttatcaagtgtaaataatgacgatcctgctcgtcttggacttagccatgataaaaagagtttgaggcctacattaagcaagataggcatgactagcttggaatttttggaggccttaccatttgcagcttttgcatctttgttagttgagattgttgcaagacttgatcttgttattgaacaagtagtggaattgggaagagttgcgcaatttaaggaatatagtcatgatgatgtggttattaatgtaagttgtgataataatcctagagtgggaaatgagttcccctcctcccatacagcaacagattgagtactctagactttagtggctacattttttcagtagtcaaatgatatatatgcattatttagtgatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="17631" stop="16386"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17331" g_stop="16686" g_length="646"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="646" r_length="646" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E298409" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>646</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E298409" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17331" e_stop="16686"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGAGTAGTATTCAAAGATCCATGCATTCGACTTGCCAGAGAAGTGACAACGACACTAAAGGAACTAGGCGATAGCATACGAAATCGTCGTAAATACTGCCCAGAAATCCCATCTAATCATGTCAATGAAGCCTTACAAGACCTCATCGACGCATTAAAATCCCAGCCAAGACTCTTTCTCGGCACAAATAGTAATACAAACATACTATTAGCCTTAGCCACATTGGCCACTAGGCAAAAATCAGGTAAAGATTTTGTAGCCTCTTTATCAAGTGTAAATAATGACGATCCTGCTCGTCTTGGACTTAGCCATGATAAAAAGAGTTTGAGGCCTACATTAAGCAAGATAGGCATGACTAGCTTGGAATTTTTGGAGGCCTTACCATTTGCAGCTTTTGCATCTTTGTTAGTTGAGATTGTTGCAAGACTTGATCTTGTTATTGAACAAGTAGTGGAATTGGGAAGAGTTGCGCAATTTAAGGAATATAGTCATGATGATGTGGTTATTAATGTAAGTTGTGATAATAATCCTAGAGTGGGAAATGAGTTCCCCTCCTCCCATACAGCAACAGATTGAGTACTCTAGACTTTAGTGGCTACATTTTTTCAGTAGTCAAATGATATATATGCATTATTTAGTGATGA</genome_strand>
        <mrna_strand>TTCGAGTAGTATTCAAAGATCCATGCATTCGACTTGCCAGAGAAGTGACAACGACACTAAAGGAACTAGGCGATAGCATACGAAATCGTCGTAAATACTGCCCAGAAATCCCATCTAATCATGTCAATGAAGCCTTACAAGACCTCATCGACGCATTAAAATCCCAGCCAAGACTCTTTCTCGGCACAAATAGTAATACAAACATACTATTAGCCTTAGCCACATTGGCCACTAGGCAAAAATCAGGTAAAGATTTTGTAGCCTCTTTATCAAGTGTAAATAATGACGATCCTGCTCGTCTTGGACTTAGCCATGATAAAAAGAGTTTGAGGCCTACATTAAGCAAGATAGGCATGACTAGCTTGGAATTTTTGGAGGCCTTACCATTTGCAGCTTTTGCATCTTTGTTAGTTGAGATTGTTGCAAGACTTGATCTTGTTATTGAACAAGTAGTGGAATTGGGAAGAGTTGCGCAATTTAAGGAATATAGTCATGATGATGTGGTTATTAATGTAAGTTGTGATAATAATCCTAGAGTGGGAAATGAGTTCCCCTCCTCCCATACAGCAACAGATTGAGTACTCTAGACTTTAGTGGCTACATTTTTTCAGTAGTCAAATGATATATATGCATTATTTAGTGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E541567" ref_strand="+" ref_description="SGN-E541567 [TUS-62-G21](-)">
      <seq>gttcgagtagtattcaaagatccatgcattcgacttgccagagaagtgacaacgacactaaaggaactaggcgatagcatacgaaatcgtcgtaaatactgcccagaaatcccatctaatcatgtcaatgaagccttacaagacctcatcgacgcattaaaatcccagccaagactctttctcggcacaaatagtaatacaaacatactattagccttagccacattggccactaggcaaaaatcaggtaaagattttgtagcctctttatcaagtgtaaataatgacgatcctgctcgtcttggacttagccatgataaaaagagtttgaggcctacattaagcaagataggcatgactagcttggaatttttggaggccttaccatttgcagcttttgcatctttgttagttgagattgttgcaagacttgatcttgttattgaacaagtagtggaattgggaagagttgcgcaatttaaggaatatagtcatgatgatgtggttattaatgtaagttgtgataataatcctagagtgggaaatgagttcccctcctcccatacagcaacagattgagtactctagactttagtggctacattttttcagtagtcaaatgatatatatgcattatttagtgagaaaaaaaaaaaaggaaaaaaaaaaactcgaggggggcccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="17632" stop="16386"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17332" g_stop="16690" g_length="643"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="643" r_length="643" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="644" polyA_stop="657"/>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E541567" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>643</cumulative_length_of_scored_exons>
        <coverage percentage="0.939" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E541567" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17332" e_stop="16690"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCGAGTAGTATTCAAAGATCCATGCATTCGACTTGCCAGAGAAGTGACAACGACACTAAAGGAACTAGGCGATAGCATACGAAATCGTCGTAAATACTGCCCAGAAATCCCATCTAATCATGTCAATGAAGCCTTACAAGACCTCATCGACGCATTAAAATCCCAGCCAAGACTCTTTCTCGGCACAAATAGTAATACAAACATACTATTAGCCTTAGCCACATTGGCCACTAGGCAAAAATCAGGTAAAGATTTTGTAGCCTCTTTATCAAGTGTAAATAATGACGATCCTGCTCGTCTTGGACTTAGCCATGATAAAAAGAGTTTGAGGCCTACATTAAGCAAGATAGGCATGACTAGCTTGGAATTTTTGGAGGCCTTACCATTTGCAGCTTTTGCATCTTTGTTAGTTGAGATTGTTGCAAGACTTGATCTTGTTATTGAACAAGTAGTGGAATTGGGAAGAGTTGCGCAATTTAAGGAATATAGTCATGATGATGTGGTTATTAATGTAAGTTGTGATAATAATCCTAGAGTGGGAAATGAGTTCCCCTCCTCCCATACAGCAACAGATTGAGTACTCTAGACTTTAGTGGCTACATTTTTTCAGTAGTCAAATGATATATATGCATTATTTAGTG</genome_strand>
        <mrna_strand>GTTCGAGTAGTATTCAAAGATCCATGCATTCGACTTGCCAGAGAAGTGACAACGACACTAAAGGAACTAGGCGATAGCATACGAAATCGTCGTAAATACTGCCCAGAAATCCCATCTAATCATGTCAATGAAGCCTTACAAGACCTCATCGACGCATTAAAATCCCAGCCAAGACTCTTTCTCGGCACAAATAGTAATACAAACATACTATTAGCCTTAGCCACATTGGCCACTAGGCAAAAATCAGGTAAAGATTTTGTAGCCTCTTTATCAAGTGTAAATAATGACGATCCTGCTCGTCTTGGACTTAGCCATGATAAAAAGAGTTTGAGGCCTACATTAAGCAAGATAGGCATGACTAGCTTGGAATTTTTGGAGGCCTTACCATTTGCAGCTTTTGCATCTTTGTTAGTTGAGATTGTTGCAAGACTTGATCTTGTTATTGAACAAGTAGTGGAATTGGGAAGAGTTGCGCAATTTAAGGAATATAGTCATGATGATGTGGTTATTAATGTAAGTTGTGATAATAATCCTAGAGTGGGAAATGAGTTCCCCTCCTCCCATACAGCAACAGATTGAGTACTCTAGACTTTAGTGGCTACATTTTTTCAGTAGTCAAATGATATATATGCATTATTTAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E712466" ref_strand="+" ref_description="SGN-E712466 [FB04DG05]">
      <seq>agcacgttgacatcctcaaagccaaagccgaagaaaaggctgagaaagcagtagcaaggacaagggaagagaagaggatagcagaagaggtgagaaaagcaaaagaagcggaagcgaagatggagctacatcaagcgaaagcacgtcatgcagcggagacgctgcaatcgaagcaatctcatctaatagggcgccacggccacggccacggccacggccaccaccatcatgctgtcggtggccagcaaaatccagtggtgggtagtaccgttccaactactgggaccgttgctcctacctatcctcttggaggctaccctcctacttctcatggccatatctaatttagcagcatcctgtagtagtgtgtagtttcagttccgttctctgtaatgcctttggaataaattgaggaacgcctttggtttttttagctagctagctagatccattgacaagtatacatgtcatgactagtatcaaaacatttccctttgaaagaattatattctttgtattccgctttctgtccaatattctgtacaacgctcaataaataatagaaaattgcaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="21706" stop="23363"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22006" g_stop="22043" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="38" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22044" i_stop="22541" i_length="498">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22542" g_stop="23060" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="569" r_length="531" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="572" polyA_stop="583"/>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E712466" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="0.955" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E712466" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22006" e_stop="22043"/>
          <exon e_start="22542" e_stop="23060"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCACGTTGACATCCTCAAAGCCAAAGCCGAAGAAAAGGTACGCCCCAATATATAGTATTACTTCTATATTCCCATTTCTTCATATGATCATTCATTTGTTATTAGTATATTATTTTCATTATTTGTTGCTATCGTGATGTGGATTGGTTTCTATTTTTTCACTCATATGATAGATGTTAAAAGAATGATAAAAGTAGTATAAGGTTTGGACGATTCTTCTTTCTTTGTGCTAAAAATCTTTTTCCCTTTGAACTTTCTTTCAACTAAGATTTTATAGGTGAGTTAGACATAAAATCTGATCTCCTCCCTTTGAGCCACTCTTTCAGGGTGAGTTAGGCCTAAAATTTAATTTTAAGAAGGTGGACTTGCATTCACACTCTATTTTGTGAAATTATATTGAGCGTGATTTTAATTATTTAATAAATGAAGTAACTATTATTATCAGTATTTGAGGAAATTTTTGAGTCATTAGAGAGATAATATTTATATATTGAATTATATTTTGAATAAAATTCATATATTTGCGTTGAAACAGGCTGAGAAAGCAGTAGCAAGGACAAGGGAAGAGAAGAGGATAGCAGAAGAGGTGAGAAAAGCAAAAGAAGCGGAAGCGAAGATGGAGCTACATCAAGCGAAAGCACGTCATGCAGCGGAGACGCTGCAATCGAAGCAATCTCATCTAATA----G----GG---C-GCCACGGCCACGGCCACCACCATCATGCTGTCGGTGGCCAGCAAAATCCAGTGGTGGGTAGTACCGTTCCAACTACTGGGACCGTTGCTCCTACCTATCCTCTTGGAGGCTACCCTCCTACTTCTCATGGCCATATCTAATTTAGCAGCATCCTGTAGTAGTGTGTAGTTTCAGTTCCGTTCTCTGTAATGCCTTTGGAATAAATTGAGGAACGCCTTTGGTTTTTTTAGCTAGCTAGCTAGATCCATTGACAAGTATACATGTCATGACTAGTATCAAAACATTTCCCTTTGAAAGAATTATATTCTTTGTATTCCGCTTTCTGTCCAATATTCTGTACAACGCTCAATAAATAATAGAAAATT</genome_strand>
        <mrna_strand>AGCACGTTGACATCCTCAAAGCCAAAGCCGAAGAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAGAAAGCAGTAGCAAGGACAAGGGAAGAGAAGAGGATAGCAGAAGAGGTGAGAAAAGCAAAAGAAGCGGAAGCGAAGATGGAGCTACATCAAGCGAAAGCACGTCATGCAGCGGAGACGCTGCAATCGAAGCAATCTCATCTAATAGGGCGCCACGGCCACGGCCACGGCCACGGCCACCACCATCATGCTGTCGGTGGCCAGCAAAATCCAGTGGTGGGTAGTACCGTTCCAACTACTGGGACCGTTGCTCCTACCTATCCTCTTGGAGGCTACCCTCCTACTTCTCATGGCCATATCTAATTTAGCAGCATCCTGTAGTAGTGTGTAGTTTCAGTTCCGTTCTCTGTAATGCCTTTGGAATAAATTGAGGAACGCCTTTGGTTTTTTTAGCTAGCTAGCTAGATCCATTGACAAGTATACATGTCATGACTAGTATCAAAACATTTCCCTTTGAAAGAATTATATTCTTTGTATTCCGCTTTCTGTCCAATATTCTGTACAACGCTCAATAAATAATAGAAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E374599" ref_strand="+" ref_description="SGN-E374599 [TUS-15-N11]">
      <seq>tcttttgccatcgcctactggcttcttaaacttgttatctccccgttctccttatccattgctttcaccaggtatgcagcatcctccaccgctgacaccaaatttcttcttctctcctatggctcagcctggaggttttggcactggaccacaatttcctccttcccctggttatggatttccgttgtcaccttctgggttcttcgccatgtcaagtccaagatggaggggtcaatagcaccaccacgaacagagctgctgatctcgatggattctttgcttcgagtttcgtccaggtggtagatttccttcaaattaaagctttttcactgtggatatgcagtgtatacactatacaatgtaagagatccttctgaacgtgtttatactttttttctttgtttttcttaacatatattttgaatatttgactctttcaatgtagagttcgtagcagatgtatctctgtatttgcctagcccttatttagtacatttagcaactctcaactgaacagttgaaaaggtcaggcttgttagattatagttaattgtattttatatgtagctggaaaggttcttgtattccttgtaatgtcaattttgggatcaaatattttggtttcttttcctatcatatagatcaattttcagttaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="29846" stop="28592"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29546" g_stop="28889" g_length="658"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E374599" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>658</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E374599" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29546" e_stop="28889"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTTGCCATCGCCTACTGGCTTCTTAAACTTGTTATCTCCCCGTTCTCCTTATCCATTGCTTTCACCAGGTATGCAGCATCCTCCACCGCTGACACCAAATTTCTTCTTCTCTCCTATGGCTCAGCCTGGAGGTTTTGGCACTGGACCACAATTTCCTCCTTCCCCTGGTTATGGATTTCCGTTGTCACCTTCTGGGTTCTTCGCCATGTCAAGTCCAAGATGGAGGGGTCAATAGCACCACCACGAACAGAGCTGCTGATCTCGATGGATTCTTTGCTTCGAGTTTCGTCCAGGTGGTAGATTTCCTTCAAATTAAAGCTTTTTCACTGTGGATATGCAGTGTATACACTATACAATGTAAGAGATCCTTCTGAACGTGTTTATACTTTTTTTCTTTGTTTTTCTTAACATATATTTTGAATATTTGACTCTTTCAATGTAGAGTTCGTAGCAGATGTATCTCTGTATTTGCCTAGCCCTTATTTAGTACATTTAGCAACTCTCAACTGAACAGTTGAAAAGGTCAGGCTTGTTAGATTATAGTTAATTGTATTTTATATGTAGCTGGAAAGGTTCTTGTATTCCTTGTAATGTCAATTTTGGGATCAAATATTTTGGTTCTTTTTCCTATCATATAGATCAATTTTCAGTTTGT</genome_strand>
        <mrna_strand>TCTTTTGCCATCGCCTACTGGCTTCTTAAACTTGTTATCTCCCCGTTCTCCTTATCCATTGCTTTCACCAGGTATGCAGCATCCTCCACCGCTGACACCAAATTTCTTCTTCTCTCCTATGGCTCAGCCTGGAGGTTTTGGCACTGGACCACAATTTCCTCCTTCCCCTGGTTATGGATTTCCGTTGTCACCTTCTGGGTTCTTCGCCATGTCAAGTCCAAGATGGAGGGGTCAATAGCACCACCACGAACAGAGCTGCTGATCTCGATGGATTCTTTGCTTCGAGTTTCGTCCAGGTGGTAGATTTCCTTCAAATTAAAGCTTTTTCACTGTGGATATGCAGTGTATACACTATACAATGTAAGAGATCCTTCTGAACGTGTTTATACTTTTTTTCTTTGTTTTTCTTAACATATATTTTGAATATTTGACTCTTTCAATGTAGAGTTCGTAGCAGATGTATCTCTGTATTTGCCTAGCCCTTATTTAGTACATTTAGCAACTCTCAACTGAACAGTTGAAAAGGTCAGGCTTGTTAGATTATAGTTAATTGTATTTTATATGTAGCTGGAAAGGTTCTTGTATTCCTTGTAATGTCAATTTTGGGATCAAATATTTTGGTTTCTTTTCCTATCATATAGATCAATTTTCAGTTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E374598" ref_strand="+" ref_description="SGN-E374598 [TUS-15-N11](-)">
      <seq>atcttttgccatcgcctactggcttcttaaacttgttatctccccgttctccttatccattgctttcaccaggtatgcagcatcctccaccgctgacaccaaatttcttcttctctcctatggctcagcctggaggttttggcactggaccacaatttcctccttcccctggttatggatttccgttgtcaccttctgggttcttcgccatgtcaagtccaagatggaggggtcaatagcaccaccacgaacagagctgctgatctcgatggattctttgcttcgagtttcgtccaggtggtagatttccttcaaattaaagctttttcactgtggatatgcagtgtatacactatacaatgtaagagatccttctgaacgtgtttatactttttttctttgtttttcttaacatatattttgaatatttgactctttcaatgtagagttcgtagcagatgtatctctgtatttgcctagcccttatttagtacatttagcaactctcaactgaacagttgaaaaggtcaggcttgttagattatagttaattgtattttatatgtagctggaaaggttcttgtattccttgtaatgtcaattttgggatcaaatattttggttctttttcctatcatatagatcaattttcagttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="29847" stop="28592"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29547" g_stop="28891" g_length="657"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="657" r_length="657" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E374598" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>657</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E374598" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29547" e_stop="28891"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTTTTGCCATCGCCTACTGGCTTCTTAAACTTGTTATCTCCCCGTTCTCCTTATCCATTGCTTTCACCAGGTATGCAGCATCCTCCACCGCTGACACCAAATTTCTTCTTCTCTCCTATGGCTCAGCCTGGAGGTTTTGGCACTGGACCACAATTTCCTCCTTCCCCTGGTTATGGATTTCCGTTGTCACCTTCTGGGTTCTTCGCCATGTCAAGTCCAAGATGGAGGGGTCAATAGCACCACCACGAACAGAGCTGCTGATCTCGATGGATTCTTTGCTTCGAGTTTCGTCCAGGTGGTAGATTTCCTTCAAATTAAAGCTTTTTCACTGTGGATATGCAGTGTATACACTATACAATGTAAGAGATCCTTCTGAACGTGTTTATACTTTTTTTCTTTGTTTTTCTTAACATATATTTTGAATATTTGACTCTTTCAATGTAGAGTTCGTAGCAGATGTATCTCTGTATTTGCCTAGCCCTTATTTAGTACATTTAGCAACTCTCAACTGAACAGTTGAAAAGGTCAGGCTTGTTAGATTATAGTTAATTGTATTTTATATGTAGCTGGAAAGGTTCTTGTATTCCTTGTAATGTCAATTTTGGGATCAAATATTTTGGTTCTTTTTCCTATCATATAGATCAATTTTCAGTTT</genome_strand>
        <mrna_strand>ATCTTTTGCCATCGCCTACTGGCTTCTTAAACTTGTTATCTCCCCGTTCTCCTTATCCATTGCTTTCACCAGGTATGCAGCATCCTCCACCGCTGACACCAAATTTCTTCTTCTCTCCTATGGCTCAGCCTGGAGGTTTTGGCACTGGACCACAATTTCCTCCTTCCCCTGGTTATGGATTTCCGTTGTCACCTTCTGGGTTCTTCGCCATGTCAAGTCCAAGATGGAGGGGTCAATAGCACCACCACGAACAGAGCTGCTGATCTCGATGGATTCTTTGCTTCGAGTTTCGTCCAGGTGGTAGATTTCCTTCAAATTAAAGCTTTTTCACTGTGGATATGCAGTGTATACACTATACAATGTAAGAGATCCTTCTGAACGTGTTTATACTTTTTTTCTTTGTTTTTCTTAACATATATTTTGAATATTTGACTCTTTCAATGTAGAGTTCGTAGCAGATGTATCTCTGTATTTGCCTAGCCCTTATTTAGTACATTTAGCAACTCTCAACTGAACAGTTGAAAAGGTCAGGCTTGTTAGATTATAGTTAATTGTATTTTATATGTAGCTGGAAAGGTTCTTGTATTCCTTGTAATGTCAATTTTGGGATCAAATATTTTGGTTCTTTTTCCTATCATATAGATCAATTTTCAGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E205275" ref_strand="+" ref_description="SGN-E205275 [cLEC-25-N21]">
      <seq>tcttttgccatcgcctactggcttcttaaacttgttatctccccgttctccttatccattgctttcaccaggtatgcagcatcctccaccgctgacaccaaatttcttcttctctcctatggctcagcctggaggttttggcactggaccacaatttcctccttcccctggttatggatttccgttgtcaccttctgggttcttcgccatgtcaagtccaagatggaggggtcaatagcaccaccacgaacagagctgctgatctcgatggattctttgcttcgagtttcgtccaggtggtagatttccttcaaattaaagctttttcactgtggatatgcagtgtatacactatacaatgtaagagatccttctgaacgtgtttatactttttttctttgtttttcttaacatatattttgaatatttgactctttcaatgtagagttcgtagcagatgtatctctgtatttgcctagcccttatttagtacatttagcaactctcaactgaacagttgaaaaggtcaggcttgttagattatagntaattgtattttatatgtagctggaaaggttcttgtattccttgtaatgtcaattttgggatcaaaatatttggttctttttcctatcatatagatcaattttcagttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="29846" stop="28592"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29546" g_stop="28891" g_length="656"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="656" r_length="656" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="657" polyA_stop="666"/>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E205275" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>656</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205275" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29546" e_stop="28891"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTTGCCATCGCCTACTGGCTTCTTAAACTTGTTATCTCCCCGTTCTCCTTATCCATTGCTTTCACCAGGTATGCAGCATCCTCCACCGCTGACACCAAATTTCTTCTTCTCTCCTATGGCTCAGCCTGGAGGTTTTGGCACTGGACCACAATTTCCTCCTTCCCCTGGTTATGGATTTCCGTTGTCACCTTCTGGGTTCTTCGCCATGTCAAGTCCAAGATGGAGGGGTCAATAGCACCACCACGAACAGAGCTGCTGATCTCGATGGATTCTTTGCTTCGAGTTTCGTCCAGGTGGTAGATTTCCTTCAAATTAAAGCTTTTTCACTGTGGATATGCAGTGTATACACTATACAATGTAAGAGATCCTTCTGAACGTGTTTATACTTTTTTTCTTTGTTTTTCTTAACATATATTTTGAATATTTGACTCTTTCAATGTAGAGTTCGTAGCAGATGTATCTCTGTATTTGCCTAGCCCTTATTTAGTACATTTAGCAACTCTCAACTGAACAGTTGAAAAGGTCAGGCTTGTTAGATTATAGTTAATTGTATTTTATATGTAGCTGGAAAGGTTCTTGTATTCCTTGTAATGTCAATTTTGGGATCAAATATTTTGGTTCTTTTTCCTATCATATAGATCAATTTTCAGTTT</genome_strand>
        <mrna_strand>TCTTTTGCCATCGCCTACTGGCTTCTTAAACTTGTTATCTCCCCGTTCTCCTTATCCATTGCTTTCACCAGGTATGCAGCATCCTCCACCGCTGACACCAAATTTCTTCTTCTCTCCTATGGCTCAGCCTGGAGGTTTTGGCACTGGACCACAATTTCCTCCTTCCCCTGGTTATGGATTTCCGTTGTCACCTTCTGGGTTCTTCGCCATGTCAAGTCCAAGATGGAGGGGTCAATAGCACCACCACGAACAGAGCTGCTGATCTCGATGGATTCTTTGCTTCGAGTTTCGTCCAGGTGGTAGATTTCCTTCAAATTAAAGCTTTTTCACTGTGGATATGCAGTGTATACACTATACAATGTAAGAGATCCTTCTGAACGTGTTTATACTTTTTTTCTTTGTTTTTCTTAACATATATTTTGAATATTTGACTCTTTCAATGTAGAGTTCGTAGCAGATGTATCTCTGTATTTGCCTAGCCCTTATTTAGTACATTTAGCAACTCTCAACTGAACAGTTGAAAAGGTCAGGCTTGTTAGATTATAGNTAATTGTATTTTATATGTAGCTGGAAAGGTTCTTGTATTCCTTGTAATGTCAATTTTGGGATCAAAATATTTGGTTCTTTTTCCTATCATATAGATCAATTTTCAGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E349974" ref_strand="+" ref_description="SGN-E349974 [cTOS-4-E23]">
      <seq>tcagtatcttttgccatcgcctactggcttcttaaacttgttatctccccgttctccttatccattgctttcaccaggtatgcagcatcctccaccgctgacaccaaatttcttcttctctcctatggctcagcctggaggttttggcactggaccacaatttcctccttcccctggttatggatttccgttgtcaccttctgggttcttcgccatgtcaagtccaagatggaggggtcaatagcaccaccacgaacagagctgctgatctcgatggattctttgcttcgagtttcgtccaggtggtagatttccttcaaattaaagctttttcactgtggatatgcagtgtatacactatacaatgtaagagatccttctgaacgtgtttatactttttttctttgtttttcttaacatatattttgaatatttgactctttcaatgtagagttcgtagcagatgtatctctgtatttgcctagcccttatttagtacatttagcaactctcaactgaacagttgaaaaggtcaggcttgttagattatagttaattgtattttatatgtagctggaaaggttcttgtattccttgtaatgtcaattttgggatcaaatattttggttctttttcctaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="29852" stop="28607"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29552" g_stop="28906" g_length="647"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="647" r_length="647" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E349974" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349974" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29552" e_stop="28906"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGTATCTTTTGCCATCGCCTACTGGCTTCTTAAACTTGTTATCTCCCCGTTCTCCTTATCCATTGCTTTCACCAGGTATGCAGCATCCTCCACCGCTGACACCAAATTTCTTCTTCTCTCCTATGGCTCAGCCTGGAGGTTTTGGCACTGGACCACAATTTCCTCCTTCCCCTGGTTATGGATTTCCGTTGTCACCTTCTGGGTTCTTCGCCATGTCAAGTCCAAGATGGAGGGGTCAATAGCACCACCACGAACAGAGCTGCTGATCTCGATGGATTCTTTGCTTCGAGTTTCGTCCAGGTGGTAGATTTCCTTCAAATTAAAGCTTTTTCACTGTGGATATGCAGTGTATACACTATACAATGTAAGAGATCCTTCTGAACGTGTTTATACTTTTTTTCTTTGTTTTTCTTAACATATATTTTGAATATTTGACTCTTTCAATGTAGAGTTCGTAGCAGATGTATCTCTGTATTTGCCTAGCCCTTATTTAGTACATTTAGCAACTCTCAACTGAACAGTTGAAAAGGTCAGGCTTGTTAGATTATAGTTAATTGTATTTTATATGTAGCTGGAAAGGTTCTTGTATTCCTTGTAATGTCAATTTTGGGATCAAATATTTTGGTTCTTTTTCCTATCATATAG</genome_strand>
        <mrna_strand>TCAGTATCTTTTGCCATCGCCTACTGGCTTCTTAAACTTGTTATCTCCCCGTTCTCCTTATCCATTGCTTTCACCAGGTATGCAGCATCCTCCACCGCTGACACCAAATTTCTTCTTCTCTCCTATGGCTCAGCCTGGAGGTTTTGGCACTGGACCACAATTTCCTCCTTCCCCTGGTTATGGATTTCCGTTGTCACCTTCTGGGTTCTTCGCCATGTCAAGTCCAAGATGGAGGGGTCAATAGCACCACCACGAACAGAGCTGCTGATCTCGATGGATTCTTTGCTTCGAGTTTCGTCCAGGTGGTAGATTTCCTTCAAATTAAAGCTTTTTCACTGTGGATATGCAGTGTATACACTATACAATGTAAGAGATCCTTCTGAACGTGTTTATACTTTTTTTCTTTGTTTTTCTTAACATATATTTTGAATATTTGACTCTTTCAATGTAGAGTTCGTAGCAGATGTATCTCTGTATTTGCCTAGCCCTTATTTAGTACATTTAGCAACTCTCAACTGAACAGTTGAAAAGGTCAGGCTTGTTAGATTATAGTTAATTGTATTTTATATGTAGCTGGAAAGGTTCTTGTATTCCTTGTAATGTCAATTTTGGGATCAAATATTTTGGTTCTTTTTCCTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E349422" ref_strand="+" ref_description="SGN-E349422 [cTOS-1-N21]">
      <seq>tcagtatcttttgccatcgcctactggcttcttaaacttgttatctccccgttctccttatccattgctttcaccaggtatgcagcatcctccaccgctgacaccaaatttcttcttctctcctatggctcagcctggaggttttggcactggaccacaatttcctccttcccctggttatggatttccgttgtcaccttctgggttcttcgccatgtcaagtccaagatggaggggtcaatagcaccaccacgaacagagctgctgatctcgatggattctttgcttcgagtttcgtccaggtggtagatttccttcaaattaaagctttttcactgtggatatgcagtgtatacactatacaatgtaagagatccttctgaacgtgtttatactttttttctttgtttttcttaacatatattttgaatatttgactctttcaatgtagagttcgtagcagatgtatctctgtatttgcctagcccttatttagtacatttagcaactctcaactgaacagttgaaaaggtcaggcttgttagattatagttaattgtattttatatgtagctggaaaggttcttgtattccttgtaatgtcaattttgggatcaaatattttggttctttttcctaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="29852" stop="28607"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29552" g_stop="28907" g_length="646"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="646" r_length="646" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E349422" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>646</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349422" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29552" e_stop="28907"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGTATCTTTTGCCATCGCCTACTGGCTTCTTAAACTTGTTATCTCCCCGTTCTCCTTATCCATTGCTTTCACCAGGTATGCAGCATCCTCCACCGCTGACACCAAATTTCTTCTTCTCTCCTATGGCTCAGCCTGGAGGTTTTGGCACTGGACCACAATTTCCTCCTTCCCCTGGTTATGGATTTCCGTTGTCACCTTCTGGGTTCTTCGCCATGTCAAGTCCAAGATGGAGGGGTCAATAGCACCACCACGAACAGAGCTGCTGATCTCGATGGATTCTTTGCTTCGAGTTTCGTCCAGGTGGTAGATTTCCTTCAAATTAAAGCTTTTTCACTGTGGATATGCAGTGTATACACTATACAATGTAAGAGATCCTTCTGAACGTGTTTATACTTTTTTTCTTTGTTTTTCTTAACATATATTTTGAATATTTGACTCTTTCAATGTAGAGTTCGTAGCAGATGTATCTCTGTATTTGCCTAGCCCTTATTTAGTACATTTAGCAACTCTCAACTGAACAGTTGAAAAGGTCAGGCTTGTTAGATTATAGTTAATTGTATTTTATATGTAGCTGGAAAGGTTCTTGTATTCCTTGTAATGTCAATTTTGGGATCAAATATTTTGGTTCTTTTTCCTATCATATA</genome_strand>
        <mrna_strand>TCAGTATCTTTTGCCATCGCCTACTGGCTTCTTAAACTTGTTATCTCCCCGTTCTCCTTATCCATTGCTTTCACCAGGTATGCAGCATCCTCCACCGCTGACACCAAATTTCTTCTTCTCTCCTATGGCTCAGCCTGGAGGTTTTGGCACTGGACCACAATTTCCTCCTTCCCCTGGTTATGGATTTCCGTTGTCACCTTCTGGGTTCTTCGCCATGTCAAGTCCAAGATGGAGGGGTCAATAGCACCACCACGAACAGAGCTGCTGATCTCGATGGATTCTTTGCTTCGAGTTTCGTCCAGGTGGTAGATTTCCTTCAAATTAAAGCTTTTTCACTGTGGATATGCAGTGTATACACTATACAATGTAAGAGATCCTTCTGAACGTGTTTATACTTTTTTTCTTTGTTTTTCTTAACATATATTTTGAATATTTGACTCTTTCAATGTAGAGTTCGTAGCAGATGTATCTCTGTATTTGCCTAGCCCTTATTTAGTACATTTAGCAACTCTCAACTGAACAGTTGAAAAGGTCAGGCTTGTTAGATTATAGTTAATTGTATTTTATATGTAGCTGGAAAGGTTCTTGTATTCCTTGTAATGTCAATTTTGGGATCAAATATTTTGGTTCTTTTTCCTAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E350994" ref_strand="+" ref_description="SGN-E350994 [cTOS-6-E9]">
      <seq>tcagtatcttttgccatcgcctactggcttcttaaacttgttatctccccgttctccttatccattgctttcaccaggtatgcagcatcctccaccgctgacaccaaatttcttcttctctcctatggctcagcctggaggttttggcactggaccacaatttcctccttcccctggttatggatttccgttgtcaccttctgggttcttcgccatgtcaagtccaagatggaggggtcaatagcaccaccacgaacagagctgctgatctcgatggattctttgcttcgagtttcgtccaggtggtagatttccttcaaattaaagctttttcactgtggatatgcagtgtatacactatacaatgtaagagatccttctgaacgtgtttatactttttttctttgtttttcttaacatatattttgaatatttgactctttcaatgtagagttcgtagcagatgtatctctgtatttgcctagcccttatttagtacatttagcaactctcaactgaacagttgaaaaggtcaggcttgttagattatagttaattgtattttatatgtagctggaaaggttcttgtattccttgtaatgtcaattttgggatcaaatantttggttctttttcctaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="29852" stop="28609"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29552" g_stop="28909" g_length="644"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="644" r_length="644" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E350994" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>644</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E350994" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29552" e_stop="28909"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGTATCTTTTGCCATCGCCTACTGGCTTCTTAAACTTGTTATCTCCCCGTTCTCCTTATCCATTGCTTTCACCAGGTATGCAGCATCCTCCACCGCTGACACCAAATTTCTTCTTCTCTCCTATGGCTCAGCCTGGAGGTTTTGGCACTGGACCACAATTTCCTCCTTCCCCTGGTTATGGATTTCCGTTGTCACCTTCTGGGTTCTTCGCCATGTCAAGTCCAAGATGGAGGGGTCAATAGCACCACCACGAACAGAGCTGCTGATCTCGATGGATTCTTTGCTTCGAGTTTCGTCCAGGTGGTAGATTTCCTTCAAATTAAAGCTTTTTCACTGTGGATATGCAGTGTATACACTATACAATGTAAGAGATCCTTCTGAACGTGTTTATACTTTTTTTCTTTGTTTTTCTTAACATATATTTTGAATATTTGACTCTTTCAATGTAGAGTTCGTAGCAGATGTATCTCTGTATTTGCCTAGCCCTTATTTAGTACATTTAGCAACTCTCAACTGAACAGTTGAAAAGGTCAGGCTTGTTAGATTATAGTTAATTGTATTTTATATGTAGCTGGAAAGGTTCTTGTATTCCTTGTAATGTCAATTTTGGGATCAAATATTTTGGTTCTTTTTCCTATCATA</genome_strand>
        <mrna_strand>TCAGTATCTTTTGCCATCGCCTACTGGCTTCTTAAACTTGTTATCTCCCCGTTCTCCTTATCCATTGCTTTCACCAGGTATGCAGCATCCTCCACCGCTGACACCAAATTTCTTCTTCTCTCCTATGGCTCAGCCTGGAGGTTTTGGCACTGGACCACAATTTCCTCCTTCCCCTGGTTATGGATTTCCGTTGTCACCTTCTGGGTTCTTCGCCATGTCAAGTCCAAGATGGAGGGGTCAATAGCACCACCACGAACAGAGCTGCTGATCTCGATGGATTCTTTGCTTCGAGTTTCGTCCAGGTGGTAGATTTCCTTCAAATTAAAGCTTTTTCACTGTGGATATGCAGTGTATACACTATACAATGTAAGAGATCCTTCTGAACGTGTTTATACTTTTTTTCTTTGTTTTTCTTAACATATATTTTGAATATTTGACTCTTTCAATGTAGAGTTCGTAGCAGATGTATCTCTGTATTTGCCTAGCCCTTATTTAGTACATTTAGCAACTCTCAACTGAACAGTTGAAAAGGTCAGGCTTGTTAGATTATAGTTAATTGTATTTTATATGTAGCTGGAAAGGTTCTTGTATTCCTTGTAATGTCAATTTTGGGATCAAATANTTTGGTTCTTTTTCCTAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E204861" ref_strand="+" ref_description="SGN-E204861 [cLEC-14-L19]">
      <seq>tcttttgccatcgcctactggcttcttaaacttgttatctccccgttctccttatccattgctttcaccaggtatgcagcatcctccaccgctgacaccaaatttcttcttctctcctatggctcagcctggaggttttggcactggaccacaatttcctccttcccctggttatggatttccgttgtcaccttctgggttcttcgccatgtcaagtccaagatggaggggtcaatagcaccaccacgaacagagctgctgatctcgatggattctttgcttcgagtttcgtccaggtggtagatttccttcaaattaaagctttttcactgtggatatgcagtgtatacactatacaatgtaagagatccttctgaacgtgtttatactttctttctttggttttcttaacatatattttgaatatttgactctttcaatgtagagttcgtagcaaatgtatctctgtatttgcctagcccttatttagtacatttagcaactctcaactgaacagttgaaaaggtcaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="29846" stop="28715"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29546" g_stop="29015" g_length="532"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="532" r_length="532" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E204861" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204861" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29546" e_stop="29015"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTTGCCATCGCCTACTGGCTTCTTAAACTTGTTATCTCCCCGTTCTCCTTATCCATTGCTTTCACCAGGTATGCAGCATCCTCCACCGCTGACACCAAATTTCTTCTTCTCTCCTATGGCTCAGCCTGGAGGTTTTGGCACTGGACCACAATTTCCTCCTTCCCCTGGTTATGGATTTCCGTTGTCACCTTCTGGGTTCTTCGCCATGTCAAGTCCAAGATGGAGGGGTCAATAGCACCACCACGAACAGAGCTGCTGATCTCGATGGATTCTTTGCTTCGAGTTTCGTCCAGGTGGTAGATTTCCTTCAAATTAAAGCTTTTTCACTGTGGATATGCAGTGTATACACTATACAATGTAAGAGATCCTTCTGAACGTGTTTATACTTTTTTTCTTTGTTTTTCTTAACATATATTTTGAATATTTGACTCTTTCAATGTAGAGTTCGTAGCAGATGTATCTCTGTATTTGCCTAGCCCTTATTTAGTACATTTAGCAACTCTCAACTGAACAGTTGAAAAGGTCAGGC</genome_strand>
        <mrna_strand>TCTTTTGCCATCGCCTACTGGCTTCTTAAACTTGTTATCTCCCCGTTCTCCTTATCCATTGCTTTCACCAGGTATGCAGCATCCTCCACCGCTGACACCAAATTTCTTCTTCTCTCCTATGGCTCAGCCTGGAGGTTTTGGCACTGGACCACAATTTCCTCCTTCCCCTGGTTATGGATTTCCGTTGTCACCTTCTGGGTTCTTCGCCATGTCAAGTCCAAGATGGAGGGGTCAATAGCACCACCACGAACAGAGCTGCTGATCTCGATGGATTCTTTGCTTCGAGTTTCGTCCAGGTGGTAGATTTCCTTCAAATTAAAGCTTTTTCACTGTGGATATGCAGTGTATACACTATACAATGTAAGAGATCCTTCTGAACGTGTTTATACTTTCTTTCTTTGGTTTTCTTAACATATATTTTGAATATTTGACTCTTTCAATGTAGAGTTCGTAGCAAATGTATCTCTGTATTTGCCTAGCCCTTATTTAGTACATTTAGCAACTCTCAACTGAACAGTTGAAAAGGTCAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E212183" ref_strand="+" ref_description="SGN-E212183 [cLEC-75-P8]">
      <seq>aaatttttagggttgttttgttctctgttttgctcgtttggactcaagtatttgtaaagtaaaaaaactgtatgttgtttcttttttggaagagttcggtgatatataatatttgggaaataaatactttgtgggacgaataaagttgtgtttttgggaattcagaagttatttttttctaactgaagcagaagtttgtttggagctgaagctggttggttgatctatgggtgttactgtttgtggtgatagttcttcaatttcaagtgtaaagtttgctgttatcataatgctgcttcagacccttttcggatttgttttaagtttggagagttaagggtgttatatcttaaattcaaagtgtatatctgcataggcagaagaaggtcaattgcagtgatataaggtttcagttgcagtgttgagtagggtgttaacgatagtatattttggagtttagtcattttattgaagtgtctgagatggataattcaaatcggtcgtacaataggaatgctgatcatttgggtgtgaataaatttggggagaatatcaacaagagtcctatacaccaacctaatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="31197" stop="30014"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30897" g_stop="30314" g_length="584"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="584" r_length="584" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E212183" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>584</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E212183" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30897" e_stop="30314"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTTTTAGGGTTGTTTTGTTCTCTGTTTTGCTCGTTTGGACTCAAGTATTTGTAAAGTAAAAAAACTGTATGTTGTTTCTTTTTTGGAAGAGTTCGGTGATATATAATATTTGGGAAATAAATACTTTGTGGGACGAATAAAGTTGTGTTTTTGGGAATTCAGAAGTTATTTTTTTCTAACTGAAGCAGAAGTTTGTTTGGAGCTGAAGCTGGTTGGTTGATCTATGGGTGTTACTGTTTGTGGTGATAGTTCTTCAATTTCAAGTGTAAAGTTTGCTGTTATCATAATGCTGCTTCAGACCCTTTTCGGATTTGTTTTAAGTTTGGAGAGTTAAGGGTGTTATATCTTAAATTCAAAGTGTATATCTGCATAGGCAGAAGAAGGTCAATTGCAGTGATATAAGGTTTCAGTTGCAGTGTTGAGTAGGGTGTTAACGATAGTATATTTTGGAGTTTAGTCATTTTATTGAAGTGTCTGAGATGGATAATTCAAATCGGTCGTACAATAGGAATGCTGATCATTTGGGTGTGAATAAATTTGGGAAGAATATCAACAAGAGTCCTATACACCAACCTAATTTT</genome_strand>
        <mrna_strand>AAATTTTTAGGGTTGTTTTGTTCTCTGTTTTGCTCGTTTGGACTCAAGTATTTGTAAAGTAAAAAAACTGTATGTTGTTTCTTTTTTGGAAGAGTTCGGTGATATATAATATTTGGGAAATAAATACTTTGTGGGACGAATAAAGTTGTGTTTTTGGGAATTCAGAAGTTATTTTTTTCTAACTGAAGCAGAAGTTTGTTTGGAGCTGAAGCTGGTTGGTTGATCTATGGGTGTTACTGTTTGTGGTGATAGTTCTTCAATTTCAAGTGTAAAGTTTGCTGTTATCATAATGCTGCTTCAGACCCTTTTCGGATTTGTTTTAAGTTTGGAGAGTTAAGGGTGTTATATCTTAAATTCAAAGTGTATATCTGCATAGGCAGAAGAAGGTCAATTGCAGTGATATAAGGTTTCAGTTGCAGTGTTGAGTAGGGTGTTAACGATAGTATATTTTGGAGTTTAGTCATTTTATTGAAGTGTCTGAGATGGATAATTCAAATCGGTCGTACAATAGGAATGCTGATCATTTGGGTGTGAATAAATTTGGGGAGAATATCAACAAGAGTCCTATACACCAACCTAATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E203307" ref_strand="+" ref_description="SGN-E203307 [cLEB-3-F21](-)">
      <seq>gcaaactgagtcaacaatgagtgctgaagtggagttgatttcgacaatagcagagaagaagtcctggactaggccaccaattcagatggaattccaggttcccatgtttacggcatctggacttcgagttcgctttctcaaggtatgggaaaagagcggctacaacacagttgaatgggttcgctatatcacaaaagctggttcttatgagattaggtgctgaaaaataggtaagctgatcttttttataggatcagtattatggaagcccaaggtataggggcgccattttgttatgcaggaaatgcaacttatgcatcttgtattttgagggcttttaaacatggtttgtctatagtatatttgtcccgtgaaattcattgttctgttgtacaggttagttctttacgaggactaagaagaggcttttgtttccattctatttgtatatttgacatattcccccttaaactatttttccattgaactaatgaaaaccatgggagatcaaggtgttccttcaacgaattaagaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55232" stop="53229"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54932" g_stop="54836" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="97" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54835" i_stop="54045" i_length="791">
            <donor d_prob="0.609" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54044" g_stop="54000" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="142" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="53999" i_stop="53926" i_length="74">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53925" g_stop="53526" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="542" r_length="400" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="543" polyA_stop="553"/>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E203307" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E203307" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54932" e_stop="54836"/>
          <exon e_start="54044" e_stop="54000"/>
          <exon e_start="53925" e_stop="53526"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAACTGAGTCAACAATGAGTGCTGAAGTGGAGTTGATTTCGACAATAGCAGAGAAGAAGTCCTGGACTAGGCCACCAATTCAGATGGAATTCCAGGTGCCTGAATGTTTTTTTTTTTTTTTGGGGGGGGGGTTGATAACTGTGTTCACTTGGTCAATGATGGCATGTACTCCTAGCTTCAATGGTTCTTGTTCTTGGAGAGGAGGTGGAACCTGAATGTAAGAATTTTGGAATTAGATGCAAATGGCTGAGCCCAATGCTTAGAAAAATATTTCCAGAAGGACTACTAAGAGTAGGTGACTGCTATTGAATCTTGTACCAATCAATGGCAATCATCATCGCTATTTGCTACTACTTTCTTGTGATACAAGTTGTGGAGGAGTTTGGTATTCAGCCTTGTCAAAAATGATATACCAGCCAAGTTTACTAGCTGATTGGAGGAGCTGTACCTTCGTTGGATTAGAAGGGAAGGGAAAATAAAGAAAGGAAATAGTGAGACAATTGTATTCTCATTGTTTTTCATTGACCAAGTTGGACTTAGTGAAAATTAACTTTGTTCTATTATTTTTCTCTCTAGTATCTTTTGTGCTTGAATTTTGTCAGCTCAGTTTTTCTTTCCCTTTTCTCTATCTTCCAATCAAGTGGTAGCACATTTCATTCGTTATTAGGGGAAGCTTTATGGGCACTCACGTGATGGCAATAGTCGTTTCTTTTCTGACTTAAATCAGCATACAATTAGAAAATGTAGGTTATAACAGGATCTGATTTCATAGAATCAGTTATGGCACTGTTTAGGATTACTAACTTCTGAAATTTGTTGTGCTTCTTTGTTTCTATCATGGTTAAACTATTTGTTGCAGCTGCATGACCCACTTTTGTCATTGTAGGTTCCCATGTTTACGGCATCTGGACTTCGAGTTCGCTTTCTCAAGGTATGCTTGCCAAACTTGTAATTAGGGACTGATTTTTGGGTCGAAATGCTGCTTCACTTAGTAACTGTTTGCAGGTATGGGAAAAGAGCGGCTACAACACAGTTGAATGGGTTCGCTATATCACAAAAGCTGGTTCTTATGAGATTAGGTGCTGAAAAATAGGTAAGCTGATCTTTTTTATAGGATCAGTATTATGGAAGCCCAAGGTATAGGGGCGCCATTTTGTTATGCAGGAAATGCAACTTATGCATCTTGTATTTTGAGGGCTTTTAAACATGGTTTGTCTATAGTATATTTGTCCCGTGAAATTCATTGTTCTGTTGTACAGGTTAGTTCTTTACGAGGACTAAGAAGAGGCTTTTGTTTCCATTCTATTTGTATATTTGACATATTCCCCCTTAAACTATTTTTCCATTGAACTAATGAAAACCATGGGAGATCAAGGTGTTCCTTCAACGAATTAAGAAAAAACCC</genome_strand>
        <mrna_strand>GCAAACTGAGTCAACAATGAGTGCTGAAGTGGAGTTGATTTCGACAATAGCAGAGAAGAAGTCCTGGACTAGGCCACCAATTCAGATGGAATTCCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCCATGTTTACGGCATCTGGACTTCGAGTTCGCTTTCTCAAG..........................................................................GTATGGGAAAAGAGCGGCTACAACACAGTTGAATGGGTTCGCTATATCACAAAAGCTGGTTCTTATGAGATTAGGTGCTGAAAAATAGGTAAGCTGATCTTTTTTATAGGATCAGTATTATGGAAGCCCAAGGTATAGGGGCGCCATTTTGTTATGCAGGAAATGCAACTTATGCATCTTGTATTTTGAGGGCTTTTAAACATGGTTTGTCTATAGTATATTTGTCCCGTGAAATTCATTGTTCTGTTGTACAGGTTAGTTCTTTACGAGGACTAAGAAGAGGCTTTTGTTTCCATTCTATTTGTATATTTGACATATTCCCCCTTAAACTATTTTTCCATTGAACTAATGAAAACCATGGGAGATCAAGGTGTTCCTTCAACGAATTAAGAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E228601" ref_strand="+" ref_description="SGN-E228601 [cLEL-29-K18](-)">
      <seq>agagaagaagtcctgactaggccaccaattcagatggaattccaaggttcccatgtttacggcatctggacttcgagttcgctttctcaaggtatgggaaaagagcggctacaacacagttgaatgggttcgctatatcacaaaagctggttcttatgagattaggtgctgaaaaataggtaagctgatcttttttataggatcagtattatggaagcccaaggtataggggcgccattttgttatgcaggaaatgcaacttatgcatcttgtattttgagggcttttaaacatggtttgtctatagtatatttgtcccgtgaaattcattgttctgttgtacaggttagttcttttacgaggactaagaagaggcttttgtttccattctatttgtatatttgacatattcccccttaaactatttttccattgaactaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55181" stop="53271"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54881" g_stop="54836" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="0.935"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54835" i_stop="54045" i_length="791">
            <donor d_prob="0.609" d_score="0.93"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54044" g_stop="54000" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="91" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="53999" i_stop="53926" i_length="74">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53925" g_stop="53561" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="457" r_length="366" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E228601" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>456</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E228601" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54881" e_stop="54836"/>
          <exon e_start="54044" e_stop="54000"/>
          <exon e_start="53925" e_stop="53561"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAAGAAGTCCTGGACTAGGCCACCAATTCAGATGGAATTCC-AGGTGCCTGAATGTTTTTTTTTTTTTTTGGGGGGGGGGTTGATAACTGTGTTCACTTGGTCAATGATGGCATGTACTCCTAGCTTCAATGGTTCTTGTTCTTGGAGAGGAGGTGGAACCTGAATGTAAGAATTTTGGAATTAGATGCAAATGGCTGAGCCCAATGCTTAGAAAAATATTTCCAGAAGGACTACTAAGAGTAGGTGACTGCTATTGAATCTTGTACCAATCAATGGCAATCATCATCGCTATTTGCTACTACTTTCTTGTGATACAAGTTGTGGAGGAGTTTGGTATTCAGCCTTGTCAAAAATGATATACCAGCCAAGTTTACTAGCTGATTGGAGGAGCTGTACCTTCGTTGGATTAGAAGGGAAGGGAAAATAAAGAAAGGAAATAGTGAGACAATTGTATTCTCATTGTTTTTCATTGACCAAGTTGGACTTAGTGAAAATTAACTTTGTTCTATTATTTTTCTCTCTAGTATCTTTTGTGCTTGAATTTTGTCAGCTCAGTTTTTCTTTCCCTTTTCTCTATCTTCCAATCAAGTGGTAGCACATTTCATTCGTTATTAGGGGAAGCTTTATGGGCACTCACGTGATGGCAATAGTCGTTTCTTTTCTGACTTAAATCAGCATACAATTAGAAAATGTAGGTTATAACAGGATCTGATTTCATAGAATCAGTTATGGCACTGTTTAGGATTACTAACTTCTGAAATTTGTTGTGCTTCTTTGTTTCTATCATGGTTAAACTATTTGTTGCAGCTGCATGACCCACTTTTGTCATTGTAGGTTCCCATGTTTACGGCATCTGGACTTCGAGTTCGCTTTCTCAAGGTATGCTTGCCAAACTTGTAATTAGGGACTGATTTTTGGGTCGAAATGCTGCTTCACTTAGTAACTGTTTGCAGGTATGGGAAAAGAGCGGCTACAACACAGTTGAATGGGTTCGCTATATCACAAAAGCTGGTTCTTATGAGATTAGGTGCTGAAAAATAGGTAAGCTGATCTTTTTTATAGGATCAGTATTATGGAAGCCCAAGGTATAGGGGCGCCATTTTGTTATGCAGGAAATGCAACTTATGCATCTTGTATTTTGAGGGCTTTTAAACATGGTTTGTCTATAGTATATTTGTCCCGTGAAATTCATTGTTCTGTTGTACAGGTTAGTTC-TTTACGAGGACTAAGAAGAGGCTTTTGTTTCCATTCTATTTGTATATTTGACATATTCCCCCTTAAACTATTTTTCCATTGAACTAATGAAAACCATGGGAGA</genome_strand>
        <mrna_strand>AGAGAAGAAGTCCT-GACTAGGCCACCAATTCAGATGGAATTCCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCCATGTTTACGGCATCTGGACTTCGAGTTCGCTTTCTCAAG..........................................................................GTATGGGAAAAGAGCGGCTACAACACAGTTGAATGGGTTCGCTATATCACAAAAGCTGGTTCTTATGAGATTAGGTGCTGAAAAATAGGTAAGCTGATCTTTTTTATAGGATCAGTATTATGGAAGCCCAAGGTATAGGGGCGCCATTTTGTTATGCAGGAAATGCAACTTATGCATCTTGTATTTTGAGGGCTTTTAAACATGGTTTGTCTATAGTATATTTGTCCCGTGAAATTCATTGTTCTGTTGTACAGGTTAGTTCTTTTACGAGGACTAAGAAGAGGCTTTTGTTTCCATTCTATTTGTATATTTGACATATTCCCCCTTAAACTATTTTTCCATTGAACTAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E229273" ref_strand="+" ref_description="SGN-E229273 [cLEL-29-K18](-)">
      <seq>agtcctgaactaggccaccaattcagatggaattccaggttcccatgtttacggcatctggacttcgagttcgctttctcaaggtatgggaaaagagcggctacaacacagttgaatgggttcgctatatcacaaaagctggttcttatgagattaggtgctgaaaaataggtaagctgatcttttttataggatcagtattatggaagcccaaggtataggggcgccattttgttatgcaggaaatgcaacttatgcatcttgtattttgagggcttttaaacatggtttgtctatagtatatttgtcccgtgaaattcattgttctgttgtacaggttagttctttacgaggactaagaagaggcttttgtttccattctatttgtatatttgacatattcccccttaaactatttttccattgaactaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55173" stop="53271"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54873" g_stop="54836" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="38" r_length="38" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54835" i_stop="54045" i_length="791">
            <donor d_prob="0.609" d_score="0.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54044" g_stop="54000" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="83" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="53999" i_stop="53926" i_length="74">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53925" g_stop="53561" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="448" r_length="365" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E229273" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>448</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E229273" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54873" e_stop="54836"/>
          <exon e_start="54044" e_stop="54000"/>
          <exon e_start="53925" e_stop="53561"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTCCTGGACTAGGCCACCAATTCAGATGGAATTCCAGGTGCCTGAATGTTTTTTTTTTTTTTTGGGGGGGGGGTTGATAACTGTGTTCACTTGGTCAATGATGGCATGTACTCCTAGCTTCAATGGTTCTTGTTCTTGGAGAGGAGGTGGAACCTGAATGTAAGAATTTTGGAATTAGATGCAAATGGCTGAGCCCAATGCTTAGAAAAATATTTCCAGAAGGACTACTAAGAGTAGGTGACTGCTATTGAATCTTGTACCAATCAATGGCAATCATCATCGCTATTTGCTACTACTTTCTTGTGATACAAGTTGTGGAGGAGTTTGGTATTCAGCCTTGTCAAAAATGATATACCAGCCAAGTTTACTAGCTGATTGGAGGAGCTGTACCTTCGTTGGATTAGAAGGGAAGGGAAAATAAAGAAAGGAAATAGTGAGACAATTGTATTCTCATTGTTTTTCATTGACCAAGTTGGACTTAGTGAAAATTAACTTTGTTCTATTATTTTTCTCTCTAGTATCTTTTGTGCTTGAATTTTGTCAGCTCAGTTTTTCTTTCCCTTTTCTCTATCTTCCAATCAAGTGGTAGCACATTTCATTCGTTATTAGGGGAAGCTTTATGGGCACTCACGTGATGGCAATAGTCGTTTCTTTTCTGACTTAAATCAGCATACAATTAGAAAATGTAGGTTATAACAGGATCTGATTTCATAGAATCAGTTATGGCACTGTTTAGGATTACTAACTTCTGAAATTTGTTGTGCTTCTTTGTTTCTATCATGGTTAAACTATTTGTTGCAGCTGCATGACCCACTTTTGTCATTGTAGGTTCCCATGTTTACGGCATCTGGACTTCGAGTTCGCTTTCTCAAGGTATGCTTGCCAAACTTGTAATTAGGGACTGATTTTTGGGTCGAAATGCTGCTTCACTTAGTAACTGTTTGCAGGTATGGGAAAAGAGCGGCTACAACACAGTTGAATGGGTTCGCTATATCACAAAAGCTGGTTCTTATGAGATTAGGTGCTGAAAAATAGGTAAGCTGATCTTTTTTATAGGATCAGTATTATGGAAGCCCAAGGTATAGGGGCGCCATTTTGTTATGCAGGAAATGCAACTTATGCATCTTGTATTTTGAGGGCTTTTAAACATGGTTTGTCTATAGTATATTTGTCCCGTGAAATTCATTGTTCTGTTGTACAGGTTAGTTCTTTACGAGGACTAAGAAGAGGCTTTTGTTTCCATTCTATTTGTATATTTGACATATTCCCCCTTAAACTATTTTTCCATTGAACTAATGAAAACCATGGGAGA</genome_strand>
        <mrna_strand>AGTCCTGAACTAGGCCACCAATTCAGATGGAATTCCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCCATGTTTACGGCATCTGGACTTCGAGTTCGCTTTCTCAAG..........................................................................GTATGGGAAAAGAGCGGCTACAACACAGTTGAATGGGTTCGCTATATCACAAAAGCTGGTTCTTATGAGATTAGGTGCTGAAAAATAGGTAAGCTGATCTTTTTTATAGGATCAGTATTATGGAAGCCCAAGGTATAGGGGCGCCATTTTGTTATGCAGGAAATGCAACTTATGCATCTTGTATTTTGAGGGCTTTTAAACATGGTTTGTCTATAGTATATTTGTCCCGTGAAATTCATTGTTCTGTTGTACAGGTTAGTTCTTTACGAGGACTAAGAAGAGGCTTTTGTTTCCATTCTATTTGTATATTTGACATATTCCCCCTTAAACTATTTTTCCATTGAACTAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E391525" ref_strand="+" ref_description="SGN-E391525 [TUS-16-G7](-)">
      <seq>tgagaaagagtcgcagcttaaatcccgtccaacaaagagcggaaagactattgaacttgatgatgttactttccaccaatgtgtaaacttaacgagattcaattcagaaaagactgtcagctttgtaccaccagatggtgaattcgaactgatgaagtaccgcattaccgaaggagtaaatcttcctttccgtgtattgccaacaatcaaggaattaggtcgtacgcgaatggaagtgaatgttaaggttaagagtgtgtttggtgcaaaaatgtttgctcttggagttgtcattaaagttccagtgccaaagcaaactgcaaaagcaagcttccaggtgacatcagggagagcaaagtacaatccatccattgactctttggtgtggaagataaaaaaatttcctgggcaaactgagtcaacaatgagtgctgaagtggagttgatttcgacaatagcagagaagaagtcctggactaggccaccaattcagatggaattccagctgcatgacccacttttgtcattgtaggttcccatgtttacggcatctggacttcgagttcgctttctcaaggtatgggaaaagagcggctacaacacagttgaatgggttcgctatatcacaaaagctggttcttatgagattaggtgctgaaaaataggttagttctttacgaggactaagaagaggcttttgtttccattctatttgtatatttgacatattcccccttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="59906" stop="53297"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59606" g_stop="59568" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59567" i_stop="57933" i_length="1635">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57932" g_stop="57816" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="156" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57815" i_stop="57146" i_length="670">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57145" g_stop="57055" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="247" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57054" i_stop="56954" i_length="101">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="56953" g_stop="56811" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="390" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="56810" i_stop="54951" i_length="1860">
            <donor d_prob="0.825" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="54950" g_stop="54836" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="505" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="54835" i_stop="54072" i_length="764">
            <donor d_prob="0.609" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="54071" g_stop="54000" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="577" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="53999" i_stop="53926" i_length="74">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="53925" g_stop="53838" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="578" r_stop="665" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="53837" i_stop="53672" i_length="166">
            <donor d_prob="0.759" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="53671" g_stop="53590" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="666" r_stop="747" r_length="82" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E391525" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>747</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E391525" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59606" e_stop="59568"/>
          <exon e_start="57932" e_stop="57816"/>
          <exon e_start="57145" e_stop="57055"/>
          <exon e_start="56953" e_stop="56811"/>
          <exon e_start="54950" e_stop="54836"/>
          <exon e_start="54071" e_stop="54000"/>
          <exon e_start="53925" e_stop="53838"/>
          <exon e_start="53671" e_stop="53590"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGAAAGAGTCGCAGCTTAAATCCCGTCCAACAAAGAGGTAAATTATAATTACTTGTTTTTCATCACTGAACTTGCATCTGCAGAATTCTCTTCTTGAACTACTTCTTCCAGTAGGTTTACTTAAGTGATTTCCAATTTAGGCTACTGTGAAATGAAGATTTTTGTTTGTTTGATATTAGATATCCTCAAAAAGGAAAGAATGATGTCTTTTTTTTTTTTTTGGTCTTTGCATCTAATTGGAAGAGAAATGTTAATGCTCGATAAGGAAATGGGATTGGGTTGTTCAAGAGAATTAACAGCAATTTTCTTGATGTGGAAGGTTCATGAAACTTCCCCCACTGAAGCTAGCTTTTTCTTTTCTTATTTTTAATGAAAAGGTTAAATTTTATTACCGACTACCAAGCAGATGCTAATAAGGGTGCATCATATTAGAGGTCTCCGTTCTATATATTGAAGGAATTCAGCAGATCCAACAAAGAGGCTAAGTTAGATACAACATTCTTCCTACAACACAAATAAAGACTCTTACAGCATCTAGATTTTACCTTTGCAATGTTATCACTCTTATCATTAGAACATCTACCGTTATAGCCAGTATTCCAGGAAATGCAAGTAGGAACTGCATTTTGGTAACCTATGTTGCAAGTAGGAACATCTACTGTTACCTATAATGCATTTTTGGAGGATACGACAGGTGCGACCATATTTTTGTAGAGTCCGAGTAACACAGTCCACAAAAAAGAATGAGCCACCTGATCATCAAGAGAGAACGGTTCTAGCTTTTGAATTAAGTCATATATGCAATCAAGTTCCCAGTCATACGAGTTGCTTCTTAATTGAAACTTCCATCCCTGTTTAGAATAGCAATCGGCTACTGTAGAATCTTGGTAGAGATGGTTGCATAAAGATCCGGAAGTTGCTCCATTAGAGTAGTGTCATCCAGTCATCTATCTGACCACCGACGCTAGCTTAGATGTTTAAAGTTGCTTCTTAATGATGAATGTTTATTCTGAGACCAAAAGGCATATCTTCACATGATGTATGCATTAATATCTTTAGAAAAAAGATTATCTTGTATTCGAGCACTGTTCATGTTGTACTTGTATACTTGGCTTTTCTCAACAACAAAAATGGTATTTCAAGAAAACCCATACATTCTTCTTTTACTACTTATGAAATTTAATTTTTTTATTTTTGTTTTTTTTGAGAAGTTAACGAATTTATGAAATTAAAAATTCTAGCATATTTGTTCCATTCTTCTTAAGTTCAAAAGATACAGATGGTAATAGTAATAGCCTATGATGTCGGGCAGGGACCATAAATAAGATTTACCCGATCACGTAGTTTTACATGTACTTTAAAGCATGTTTTCATAATTTTAAAATGTTTATCTTCAATGTGCCGTATATCTTTATAATCGATCAGAACTAAAATGTTAAGGTATGCTTTAAATGTTGGACTGCTTCTGTCTGTTGTGTTTCCATTTTCTGTAGAGTCCACAACTTACTCTTCCTAGTCTATTGAAACATGTAGTATGTAGCTTTTTCAGTTTGGCCTTCATGTTAGTTTCAGCCTATGCATGGTCGGGTACCATTTTGTGTTGTCACCAGCATAATGCGGTACCATTTTGTGTTGTCACCAACATAATGCATTACTTTGTTACTCTGTGCAGCGGAAAGACTATTGAACTTGATGATGTTACTTTCCACCAATGTGTAAACTTAACGAGATTCAATTCAGAAAAGACTGTCAGCTTTGTACCACCAGATGGTGAATTCGAACTGATGAAGTAAGTTCATACTTCTGTTACTACATGGTTGTTTTTTAGTTCTGTTTTTATTATCTTCTCAAGCTGGAAGCTTGAGTCTGTGGCTCTTCATTTATCTTTTATAGAACAATGCTAAATAGAATTGGAAATTTTGCATGTCAAAGCGAATGATGTTTTACCTTTAACATCATAATATCAATCTTGAATAAGTATCATATAAATAATTATCAACTTTGACTATTTGTCCGTTGAATTGCAAGTTCACTATAATCAGGTGAAATCACAGAGTATTCTGACCGTGCTTCCTATATATATATGAATTTTCTTCTCCGTCTTTCAATTTCTCATTCCATTCCATTCCTGAGACATCTCAAACTAGAATTCACTTCTACATAAGATTATCCATTATACAACATTGACAAGTTTTAACAATTTAAGATCTAAATTACTGTGATCTTTTCTCCGCGAAGTACTTCAAAACAAAAATTTGAACAGTTGGCTTGTTATCTTCTTTAAACATTACTAGAACAATATGAAAGTAAAACTACTGTGCTACAACAACTACGCCTCAATCTCAAACAAGTTGGGGTAGGCTATATTATCAATTTATCATCACTTCTCCATTTAAGCTCAACTCATGTCATTTTCATAACAGTGCCTGAATTTATAATTGCAAACTTTTTTCCCTCAGGTACCGCATTACCGAAGGAGTAAATCTTCCTTTCCGTGTATTGCCAACAATCAAGGAATTAGGTCGTACGCGAATGGAAGTGAATGTTAAGGTTTGTTACACTTCTTTCAATATAGAATAAAATTTATTTCGGAACGTCGGTCCACTTAGATATCATATATAATTTTCTAACATGATTTGTATCCTTTTCAGGTTAAGAGTGTGTTTGGTGCAAAAATGTTTGCTCTTGGAGTTGTCATTAAAGTTCCAGTGCCAAAGCAAACTGCAAAAGCAAGCTTCCAGGTGACATCAGGGAGAGCAAAGTACAATCCATCCATTGACTCTTTGGTGTGGAAGTGAGTGTGCAATAGATTTATCTTTTTTGGTGTAATCCTATAGGGTTACAAACTAAATTTATTCAGGGTTTGACCTCGGGTCTCAAGTTGACTGTGACTTTAACCTATAGTCTAAAAATATGAAATTGACATTCCTCTAGATTGGACATTGTTCTTGAAGATGTTGTACACTTTATGCATTAGGACCTTGGTTGCATGTGAATCAAACTTCTGACATCTAGTCATATAGTGTTAGAAAAACCTATATACTATTTGGATCGTATTTAGTTTATAAATATTTTGGAATTTGATGAATACTTGCCTCTTTATTTGTAACAAAAAATGAATGTACAAATAAATGGAGGGGTTATTGAAGTGACTGGTATCCACAAGCTAATGCCAGGATGTGACATTTGCTTTTTTTTACAATTAGGCATAATAATTGTGTGTGTGTGGTGGTGTGGGGATTTTTTCAGTGTTTGGGCGTGTGACTCCTTTCATATGACAGACATTATTAGGGAAGACCCCCTTTCAAGTGAACGTTTGGAAATTTAGCCAATCTAGATTAATTAAACAGACCTCTTATATATTTGTACTAATTGAGTTGGTGTTTATGGAGTTACAGCCAACCTTTCTATCTGAATGTTACTCAAAAGTCAGCAGAGGTGTAATCCCATTAGTAAAGATCTCAATAGCTCAAGGTGGAGATTAGGTCTTTGCTATCATGTTGTCCATTATCAAAAATCAATATTACGTACGAAATGCTAATTTTCTATTTCTTTCATCCCTTCACTTATGGATCCTTTTTACCATGGAATTTGCTGCTATTAATCAATGGATGAGAGTTTTGTTTGTCAAAGATTATCTTTTTGTTTGGTGGCATTTAATCTCTTTTAGAATGTTTTCACCACATTCTTGTTACAGAAACTTGACAGAGTTACAAAGGGAAACCTGTTAGGCTATACCGGTTTCTTTATGTAATCAAAGAAGAATAATGTGTGCTTCAGAGTGATCCATTTTGTTCAAACTGGAGGCAATTGGAATTTTGTAGAAGCGAATGTTTAGCTTAGACTCTGCCTTTGCAATATGTTATGTAGTCACATGTAGTTTGTCTCTATGTGCATAATTGCTTGCTTATAGATGCTTTCCTTGAAGCAAGTTAAATTTCATACACTTCATCTAAGCTGATCTGTTTATGCTTGAAAGTTGACAAACAGATGTTCTTATACTATCGCTCGTCGTTTTGAACAATATGGAATTTTCTTTGCATGAGCTTTCCAGCCTCTCAAACATGTATTATAATACAGCCTCAAACTGTCTTGATGGAGAATATATTCTCTAGACCTGATTAAAAAAAAAGGGGGGGGGGGGTAGAAATGTGGTGTACAAGAAAGGGAGTTCTGGTGAGAAAAAAGTGGGATCTTCTTGGTCTTGTTGTTGTCCATGAGCAGTGGAAGACTACGACTGCTAAATTTTGTCTTTCTTTGTTGCTTCTAAAAGGAATTAATTGTCCCTTGTTCTTCAAGATATCATAATCCGGTAAAGGGTGTATTATTGACCAGTGTTTGTGTTCATATAGTAGCAAGTAGCATAATTGCTCAGTTCATTTGACAAATATGTTTTTCTTGGCCCCCTTTTTTCGTTTTTATTTTGAAGTATCCATTATTTCAGCTTCTCGACCATGTTGTGGCAGAGATGGAGTGCACACAAATGTTCTCGTCCATTTTGCCACTGATCCAAGATATTGTTGTGAATACTATAATTGTGTATTGACCATCTTCTGTATTCTTTAATAGCATGCCAGCTATACTATTTTACCTTCTTCTGCAGTACATCTAGTTTCTAGTGGTTTGGATCTTCAATATCGGCTTCTTGTTGCAGGATAAAAAAATTTCCTGGGCAAACTGAGTCAACAATGAGTGCTGAAGTGGAGTTGATTTCGACAATAGCAGAGAAGAAGTCCTGGACTAGGCCACCAATTCAGATGGAATTCCAGGTGCCTGAATGTTTTTTTTTTTTTTTGGGGGGGGGGTTGATAACTGTGTTCACTTGGTCAATGATGGCATGTACTCCTAGCTTCAATGGTTCTTGTTCTTGGAGAGGAGGTGGAACCTGAATGTAAGAATTTTGGAATTAGATGCAAATGGCTGAGCCCAATGCTTAGAAAAATATTTCCAGAAGGACTACTAAGAGTAGGTGACTGCTATTGAATCTTGTACCAATCAATGGCAATCATCATCGCTATTTGCTACTACTTTCTTGTGATACAAGTTGTGGAGGAGTTTGGTATTCAGCCTTGTCAAAAATGATATACCAGCCAAGTTTACTAGCTGATTGGAGGAGCTGTACCTTCGTTGGATTAGAAGGGAAGGGAAAATAAAGAAAGGAAATAGTGAGACAATTGTATTCTCATTGTTTTTCATTGACCAAGTTGGACTTAGTGAAAATTAACTTTGTTCTATTATTTTTCTCTCTAGTATCTTTTGTGCTTGAATTTTGTCAGCTCAGTTTTTCTTTCCCTTTTCTCTATCTTCCAATCAAGTGGTAGCACATTTCATTCGTTATTAGGGGAAGCTTTATGGGCACTCACGTGATGGCAATAGTCGTTTCTTTTCTGACTTAAATCAGCATACAATTAGAAAATGTAGGTTATAACAGGATCTGATTTCATAGAATCAGTTATGGCACTGTTTAGGATTACTAACTTCTGAAATTTGTTGTGCTTCTTTGTTTCTATCATGGTTAAACTATTTGTTGCAGCTGCATGACCCACTTTTGTCATTGTAGGTTCCCATGTTTACGGCATCTGGACTTCGAGTTCGCTTTCTCAAGGTATGCTTGCCAAACTTGTAATTAGGGACTGATTTTTGGGTCGAAATGCTGCTTCACTTAGTAACTGTTTGCAGGTATGGGAAAAGAGCGGCTACAACACAGTTGAATGGGTTCGCTATATCACAAAAGCTGGTTCTTATGAGATTAGGTGCTGAAAAATAGGTAAGCTGATCTTTTTTATAGGATCAGTATTATGGAAGCCCAAGGTATAGGGGCGCCATTTTGTTATGCAGGAAATGCAACTTATGCATCTTGTATTTTGAGGGCTTTTAAACATGGTTTGTCTATAGTATATTTGTCCCGTGAAATTCATTGTTCTGTTGTACAGGTTAGTTCTTTACGAGGACTAAGAAGAGGCTTTTGTTTCCATTCTATTTGTATATTTGACATATTCCCCCTTAAACTATTTT</genome_strand>
        <mrna_strand>TGAGAAAGAGTCGCAGCTTAAATCCCGTCCAACAAAGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAAAGACTATTGAACTTGATGATGTTACTTTCCACCAATGTGTAAACTTAACGAGATTCAATTCAGAAAAGACTGTCAGCTTTGTACCACCAGATGGTGAATTCGAACTGATGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCGCATTACCGAAGGAGTAAATCTTCCTTTCCGTGTATTGCCAACAATCAAGGAATTAGGTCGTACGCGAATGGAAGTGAATGTTAAG.....................................................................................................GTTAAGAGTGTGTTTGGTGCAAAAATGTTTGCTCTTGGAGTTGTCATTAAAGTTCCAGTGCCAAAGCAAACTGCAAAAGCAAGCTTCCAGGTGACATCAGGGAGAGCAAAGTACAATCCATCCATTGACTCTTTGGTGTGGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAAAAAATTTCCTGGGCAAACTGAGTCAACAATGAGTGCTGAAGTGGAGTTGATTTCGACAATAGCAGAGAAGAAGTCCTGGACTAGGCCACCAATTCAGATGGAATTCCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCATGACCCACTTTTGTCATTGTAGGTTCCCATGTTTACGGCATCTGGACTTCGAGTTCGCTTTCTCAAG..........................................................................GTATGGGAAAAGAGCGGCTACAACACAGTTGAATGGGTTCGCTATATCACAAAAGCTGGTTCTTATGAGATTAGGTGCTGAAAAATAG......................................................................................................................................................................GTTAGTTCTTTACGAGGACTAAGAAGAGGCTTTTGTTTCCATTCTATTTGTATATTTGACATATTCCCCCTTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E746558" ref_strand="+" ref_description="SGN-E746558 [GI|47104192]">
      <seq>aagaaattaacacactccacaaccacaagaaaactatcacctattcttatttattattattatttagaagcaacaacacaaactacttctcccaaaaatattattacaacagaaataatgggaaattgttggccaaaacctgtggatgttgttcctcccacctctaatactcctcctccagtgatcatgaagaaaccaattaatacatctccgggaagtaacacaaggagtgtggtggcgcagcctagcggagatggcggtgattcgaggaaaatggaagttccggctagcggaaaaataattacgccaaatttaaaaatgtttacgctagcggaattaaagagcgcgacgcgtaattttcggcccgatacggtgctaggtgagggaggatttggtacagtatttaaaggatgggtcgatgacaaaacatttgcaccttctagagttggagttggtatgcctgttgctgttaaaaaatcaaatgcagacagtgaacaaggtcttaaagaatggcagatccatttcggtgttgcagccatgcctgtggcagcttcagctgtttacttcctcaatctccgtggcgatgtcctcatcaatcgtctataccgtgacgacgtcgggggtaatatggtagatgcctttcggatgcatataatgcagacaaaagaactcgggacatgtcctgtcaggcagattggaggttgctctttcttctacatgagaattagcaatgtctatattgtgattgtagttagcaccaatgcaaatgtcgcatgtgcattcaagtttgtggttgaggctgttgcactattcaaatcttattttggtggttcttttgacgaagatgccattcgaaggggtccgctcacccttttcgtcaaagcagcctttggataaaccagttccaaacgccacattacaagtcacgggcgctgttggttggcgcagggagggtcttgtttataagaagaatgaggtgtttctggatatagtagaaagtgttaatctccttatgtcttcaaaaggtagtgtgctccgttgtgatgtaactgggaaagttctcatgaaatgctttctttctggaatgcctgatttgaagttggggttaaatgataaaattggtcttgagaaagagtcgcagcttaaatcccgtccaacaaagagcggaaagactattgaacttgatgatgttactttccaccaatgtgtaaacttaacgagattcaattcagaaaagactgtcagctttgtaccaccagatggtgaattcgaactgatgaagtaccgcattaccgaaggagtaaatcttcctttccgtgtattgccaacaatcaaggaattaggtcgtacgcgaatggaagtgaatgttaaggttaagagtgtgtttggtgcaaaaatgtttgctcttggagttgtcattaaagttccagtgccaaagcaaactgcaaaagcaagcttccaggtgacatcagggagagcaaagtacaatccatccattgactctttggtgtggaagataaaaaaatttcctgggcaaactgagtcaacaatgagtgctgaagtggagttgatttcgacaatagcagagaagaagtcctggactaggccaccaattcagatggaattccagctgcatgacccacttttgtcattgtaggttcccatgtttacggcatctggacttcgagttcgctttctcaaggtatgggaaaagagcggctacaacacagttgaatgggttcgctatatcacaaaagctggttcttatgagattaggtgctgaaaaataggttagttctttacgaggactaagaagaggcttttgtttccattctatttgtatatttgacatattcccccttaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="96286" stop="53297"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71321" g_stop="71285" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="35" r_length="35" r_score="0.676"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71284" i_stop="70913" i_length="372">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.66"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70912" g_stop="70797" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="143" r_length="108" r_score="0.595"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70796" i_stop="70528" i_length="269">
            <donor d_prob="0.900" d_score="0.50"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70527" g_stop="70503" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="169" r_length="26" r_score="0.560"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="70502" i_stop="70116" i_length="387">
            <donor d_prob="0.342" d_score="0.00"/>
            <acceptor a_prob="0.670" a_score="0.60"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="70115" g_stop="70069" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="213" r_length="44" r_score="0.596"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="70068" i_stop="69608" i_length="461">
            <donor d_prob="0.000" d_score="0.60"/>
            <acceptor a_prob="0.954" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="69607" g_stop="69599" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="221" r_length="8" r_score="0.778"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="69598" i_stop="69279" i_length="320">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.65"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="69278" g_stop="69233" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="259" r_length="38" r_score="0.652"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="69232" i_stop="68135" i_length="1098">
            <donor d_prob="0.922" d_score="0.65"/>
            <acceptor a_prob="0.668" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="68134" g_stop="68127" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="267" r_length="8" r_score="0.625"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="68126" i_stop="67920" i_length="207">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.733" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="67919" g_stop="67896" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="289" r_length="22" r_score="0.750"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="67895" i_stop="67586" i_length="310">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.926" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="67585" g_stop="67567" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="307" r_length="18" r_score="0.737"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="67566" i_stop="66915" i_length="652">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.782" a_score="0.57"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="66914" g_stop="66875" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="345" r_length="38" r_score="0.575"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="66874" i_stop="66824" i_length="51">
            <donor d_prob="0.653" d_score="0.57"/>
            <acceptor a_prob="0.000" a_score="0.51"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="66823" g_stop="66781" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="391" r_length="46" r_score="0.512"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="66780" i_stop="66516" i_length="265">
            <donor d_prob="0.000" d_score="0.51"/>
            <acceptor a_prob="0.119" a_score="0.54"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="66515" g_stop="66390" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="510" r_length="119" r_score="0.492"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="66389" i_stop="66021" i_length="369">
            <donor d_prob="0.991" d_score="0.49"/>
            <acceptor a_prob="0.870" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="66020" g_stop="65910" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="511" r_stop="620" r_length="110" r_score="0.973"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="65909" i_stop="62828" i_length="3082">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="62827" g_stop="62650" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="621" r_stop="798" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="62649" i_stop="62281" i_length="369">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="62280" g_stop="62226" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="799" r_stop="853" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="62225" i_stop="60265" i_length="1961">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.399" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="60264" g_stop="60235" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="854" r_stop="883" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="16">
          <gDNA_intron_boundary i_start="60234" i_stop="60008" i_length="227">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="17">
          <gDNA_exon_boundary g_start="60007" g_stop="59915" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="884" r_stop="976" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="17">
          <gDNA_intron_boundary i_start="59914" i_stop="59826" i_length="89">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="18">
          <gDNA_exon_boundary g_start="59825" g_stop="59777" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="977" r_stop="1025" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="18">
          <gDNA_intron_boundary i_start="59776" i_stop="59707" i_length="70">
            <donor d_prob="0.062" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="19">
          <gDNA_exon_boundary g_start="59706" g_stop="59568" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="1026" r_stop="1164" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="19">
          <gDNA_intron_boundary i_start="59567" i_stop="57933" i_length="1635">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="20">
          <gDNA_exon_boundary g_start="57932" g_stop="57816" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1165" r_stop="1281" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="20">
          <gDNA_intron_boundary i_start="57815" i_stop="57146" i_length="670">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="21">
          <gDNA_exon_boundary g_start="57145" g_stop="57055" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1282" r_stop="1372" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="21">
          <gDNA_intron_boundary i_start="57054" i_stop="56954" i_length="101">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="22">
          <gDNA_exon_boundary g_start="56953" g_stop="56811" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="1373" r_stop="1515" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="22">
          <gDNA_intron_boundary i_start="56810" i_stop="54951" i_length="1860">
            <donor d_prob="0.825" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="23">
          <gDNA_exon_boundary g_start="54950" g_stop="54836" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1516" r_stop="1630" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="23">
          <gDNA_intron_boundary i_start="54835" i_stop="54072" i_length="764">
            <donor d_prob="0.609" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="24">
          <gDNA_exon_boundary g_start="54071" g_stop="54000" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="1631" r_stop="1702" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="24">
          <gDNA_intron_boundary i_start="53999" i_stop="53926" i_length="74">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="25">
          <gDNA_exon_boundary g_start="53925" g_stop="53838" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1703" r_stop="1790" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="25">
          <gDNA_intron_boundary i_start="53837" i_stop="53672" i_length="166">
            <donor d_prob="0.759" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="26">
          <gDNA_exon_boundary g_start="53671" g_stop="53597" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1791" r_stop="1865" r_length="75" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1866" polyA_stop="1877"/>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E746558" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>1896</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E746558" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71321" e_stop="71285"/>
          <exon e_start="70912" e_stop="70797"/>
          <exon e_start="70527" e_stop="70503"/>
          <exon e_start="70115" e_stop="70069"/>
          <exon e_start="69607" e_stop="69599"/>
          <exon e_start="69278" e_stop="69233"/>
          <exon e_start="68134" e_stop="68127"/>
          <exon e_start="67919" e_stop="67896"/>
          <exon e_start="67585" e_stop="67567"/>
          <exon e_start="66914" e_stop="66875"/>
          <exon e_start="66823" e_stop="66781"/>
          <exon e_start="66515" e_stop="66390"/>
          <exon e_start="66020" e_stop="65910"/>
          <exon e_start="62827" e_stop="62650"/>
          <exon e_start="62280" e_stop="62226"/>
          <exon e_start="60264" e_stop="60235"/>
          <exon e_start="60007" e_stop="59915"/>
          <exon e_start="59825" e_stop="59777"/>
          <exon e_start="59706" e_stop="59568"/>
          <exon e_start="57932" e_stop="57816"/>
          <exon e_start="57145" e_stop="57055"/>
          <exon e_start="56953" e_stop="56811"/>
          <exon e_start="54950" e_stop="54836"/>
          <exon e_start="54071" e_stop="54000"/>
          <exon e_start="53925" e_stop="53838"/>
          <exon e_start="53671" e_stop="53597"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAAATTTCAGAAAAGTCTCAACACACAAGACAACTGTTTTACTTGAACTAGTTTTAAAAATATATTTGAAGGACAGAAGTTTGATTACTTCTGAAAGTTTCTAACTTTTTCTTCAAAAATGATATGACTGGAGTCATATGTTGCGAAGTTATATTCTTTGCTACTGCTAATATCTCAACCTTACAATGTTTTAAATCACTGGACTGACTCAACTCTTTAAATATTGCTGACAACACTTTACCTTATACCTAACGCAAAAAGTGAAGTCTCAGATTGTCTGGAAAAACAAAGTTGTCTGGGAATGATATTTCTACTGCTATTGAAGCTGGAGCCTTAACAGTGCCACTCTTGCTGGTCTCCAGGAATCTAGAAAGCACATGTAAACTAAGAGCCTTACGTACAAGTCTCTCACCATAATCATTTCTTATAAATAACATTTCAGAATATAACAACCTGAAGTAACTGTTTCCAAATTAACACGAGGATAAGTTCCACAGAGGAAAAATGTTGTTTAAAGCATAATATATCCATGAGTAAAAAACATTTTGGCTATTCGACATCCAGAATTCAAACAAGCAACACAAATAAAATTAGCAAACTACAATGTATTGCTAAAAAAGACTTCAACCTTTATGGTTGCAATAAACAATTTATCAAATAAACCACTATAATACCGTAGTCTTATGGTTAGAACAGGAAAATAGAACTCTACAAAAGTGCTTGTTGGATGTTGTCATTTATACCCATTCTAATTTTTCTCAATATACAAGGATACAGTGAATAGCTAACAAGACATGATGTTCTTGAAAGTTC-AATAGCATGTCTATACTGGAAGTTTTAAGAGCAAAATCATGCTGTTTCGCGTTTCATCGCTTCTTGGCACCAGCTTCTCACAAATCAGAGTCAACAGGAAACTGAATCCCCCATCAATACCACTCCACATAAACACACTGTAAGTCCTTCAGAATAAAGCAAAAATATCAAGCAAGCTGCGTAGCTGCAGTCATTTTACTGAAATCCTCATCTCAAATGTAATGACTACACATAGTAAGTTTTCAAATCCACTCCAATTTGCCTTGATATTCCACACGATATTTAATTTTTCCTGCAGCTGAGAGTGCCTGGCCTGTTACATTCGCAGGCTTTGTAGTGTACTTCAATTCAAACTTACGGAATTTCTTGTTATTCTCTTCTGTACTAGAAGGTGCATCTGCTGGGATCTCATCTAGGAACTCGTCTGCCACATCTCCGTCTTCATCTATTCTAAGACGCTTGGCATACCATCTCAATCCCTAAGCACGGAGAAAAATGTAAAACTATTAAAGATGTGCATCACAAACTTACCAATTATTCTAAGTTTCTGAGATAGCAAAAGCAGATAACAGGATGCACTCAGCATTAATCAAGAAATAATAGTGATTTTTAATCAAATGAACAAGTCGTACACGATATGAACTATCAAAAAAATTTGTCATTCTCTCTTCACCACTAAAGAACACACTTTTACTCATACGATTCCAAATGAACCAAGAAACTTAAACACTCCGGAACCACCAAAGGTTCCATCAAAGAAGCACCGGCAGGCATTAAAAAAACTGCAGCAGGACAACGGTCTGAACAACTTAAATTAATCAGAAAATCTACCATGTCCTCTCTAATCTAGAAATTCATTTTTTTATAGATACCTTTTTCCTATTTCTTATGTTTTAAAGGGATAGGAAGGTTGGCTATAGATGAACTTTGAGTATGATACAGAGCATTAAGAAGTCCTTGAAGATAAAAGAATACGCGAAGAACAAACTAATGAAAAAATTATTCTTTCTGCCTTTCAAATACTCTTTATCAGACGGCACACACAGTCTCATAGCTCATACAACAGAAGGTTAATGCAAAGACCCCTTGATCTCCCAGAGTCATCAGTATGTATAACAAGCTAGGAGTGAGGAGATACCCAGAGGACTTCTCCGCCTTATCTCAGCAAGTTCCTGGAACTTAGAAACCTAGCCACAGATGGTAGCAGGTCCAATAAGCATGTTTTGAGCACAAGGCACAGTTATGGTATGGACTTCAGCGGAGAAGAAATGGAGGTAACATACGTATGTATGTATGATGCAAAGAGTATAGGTACACAAAAAAAACTATTATTTTGACAAGTTGAGAAAATCACCACCAAGTGAAGTATAAGTAAGAAAATCATGTCCAAACCAATTTTAAATTTCTGATTTGCATGCAGATAAATCAGAAATTCAAATTTAATGACCACTAATTCTCTAACTAAATTCTAATTTCATATCCAGATAAAACACATGTTCATTTGTAACACTTCTCTTAGCAATTTATACATCAATGTACCAACAATATTCACTGTATAGTGTCACATTCTTCAAGATAGAGCCTCTTATGCCTTAGTGCCTCGGAATCCTCATAAAATTGCTGCCTAAGTGAGACGAAATATCCAACTTGGACTTCATTTAGTTTCACGATAAATAGTACCTCAAGTGACCCTTTAACAACACCTCATCTATGGTTGCAACTTACAAATAAAATCCTAACACACTTAGTAATCCTTCATAAGAATGTCCTTCCCTTTGCAGGGTTTAGGATTTAGGCATTTCAACTCCTAACAACTCTCTGAAAGCTAAATGCCTTATGTATCTTTTTAGTTGGAGTACTCCAACCCCTGCGAATAATGTTGTTCCCTTCCTAGATTTTGTTACTTCAGCACTTTTTTTGGTTTTCCTCATTAGCTCCCCGGGCCTAAATGTTCTAAGGTATGGAGCTGACATCTAATATTTCTGCAATAGCATCTTCCATTTTTTCTTTGATGGGTAAAAGTTTTTATTAGTATGGTCCCAAAATGTTACAGGACCAAGTAAACGACAAAGCTACAACATTTCCACAGTCGTTGATGGGTAATAGCATCTACAACATACTCTAGCCACCAAAAAAAAAACTTGATACATCTATTTTTACTCTAGCAATCTGCGGTCCTTTCCACTCAAAGCGTGTCTTGTTCCTTTCTAGCCAAACAGTCCAAAATATGCAGATGCGACATCTTCTTGATGCCGGCAATGAAACAACTTACACTTTCCAGGGAATCTATCACCATGACCCAAAATCTAAACCAATAAACAAGAAAATCTTGCATTTGTAATTACAAATGAGCTGTGTTTTCGGTCGCTTAGCTGAGTCTGTCCTAATCAAAAAGAAAGAAGATGAAGATAACCTGAACACAAATGTTGGAGGAGTCCTCCTACCACCCAACAATTATGTTTAAAAGCTAAACTTGCAAAGCTTCAACACTTAGCAACCAAGTTGCAGAACAAAATTCTTTCTTTAGATCGCATGTTGTTTTATGTTTGACACACTCTATCATGGAATTTCATTAATTGGATAAAAGAAGAAACTTGAAGATTCAGGCCTAAACAGTGATGACACATCATAATCTCGCCTCATACTTCTCCTCAAGGTAACTGCATAAGAGGGACCTGCGAATGACAAGCTTTATTTGAACCATTTCCTGATTTGTGCATATCATCTTTGTGCAGGGGCTATGCTAAACTTATGTATCGTTCCAATTTTATCAGATGTCTTCAAAGGGACTGGGGCTCTAGCCTCTATCTAGTTCAGTATACTTCTCTTATGTGATCCAGATAAACTTATAGCCTAGACCATCACAGGGACCAATATTTGTAGGCAAAAATCTGACTCCTCTCTCCACACCATGTCTGCAGGCGAAAAATATTATTGCCCTGGTTGCACAAAACAATAGGAGGATCTCGAAAAATTGCTTAAAGAAGAAAAGGCTACAACCTAAAAAACTTAAATCATACAAGGATATCTAAAACTACATAAAAACAGTTCTGTATGATTACTCTGGAAGATCCATTGCAGTCAGACAGCTTTATATATATCATGATCTACATATGCTAAGATATGCACATTCCATAAGTACTAACAGAAAACTAGCAAAAGAAGAGAAACTGAATGTTTGAATCCATGGAACCTAGAAATAGCAAAGAATGAGGATGTCTCTAAAAGACTAAAACTAGGAGCACACTTAGAACAATCGAAAACAGGAAATAGAAATTTCAGGTAAATGATTCAAGCTGTGCACAATCAAATCTACAGCAAAGCTCCTCTCTCAGGACCTAAAGGAAAGTTAAAAGAAAGAACTTAATTTCCACTCATGGAAGGTCACTGATCATGGAAACTTCCATTTCCAAACTGCTACGGTCGAGTGAATAACTACAACTTCAATTATTGCATAAGCAAAATACAGATTTTCGCTAAGTAGGGAAATGTAACTCTTCAGTTACATATAGCAGTCCAATTACATCATTATTTGAGCTGTGTTTGGCAGAAACTACACTTCAGGATTTATCTTTCTTTTTTCGTGTAGCAGTAACTTGGAAATTGTCTAATTAAGCCGGCCTAACAAGATGGTATCTACACATAATTACTTGAATTTTTCAACAGTATTAAGGGCTTTATAGTCTACAGATCATTTT-GACCAGATAGGCTG-TAAG-CAGAAATGATTAAAACAGAATTACAGGTTCTCAACAAGTTTCCTCCATTTGTTCCATTAATTACCTGAACGCCTCCAGCACCTCTATTGCATTGAACAAGGATAGGACCAGGTAGATCTCTGGAAACAGGAACCTGAACAGGGACACTGAATCCTTTACGAGGAAGATTATTGTGAGGTCCTACACTTTCATCTCTCACTTCGTGACCTTCATCCTTTGAAAACCCTAGAAGCCCAGCTAATCTCCTAAACATACCCATCACTTGTGCTAGATAGAAGATAGATGCATTTCAAGAACCGACAAACGATGGCAACACTGAAATCACAACCGGCGGCAGATCTTAATAAGCCTTTCGTCCTGATTGGATATC-GGCGATGACAGTGCGATGAGCTGAAAAAAAGGTACTAATGTTGCCTTTTTTCTTCTTTTTCTTTTTCACTTTCTTCCTCGTGCAAATTTTGAAAACGCAATATTTACTTCTGATAACCACAAATTAACGTTAAAAGAATTGCTCCTACAAGGGCAAATTAGACCTTTTAATCGTTTTTAATTTTTAAACCGGGTCAGACGAAGAGCACGTGCTGTCGTCTTCATTTTGTTTCTGGCGTTGAAATAAGAAAAAAGGGATACCGAAGACGGCGAATTTAAGCTGTCCCCAACTGGCGACATTTCTCTCCCATCTACGACAAATCTAACTGTTCTTCCCTACGTTTTTCATTTCATTATTATTGAAGAACCTTTCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGGGTATGTTTCCACTCTCTTCGCACGGATCAGTGTACGTAGAATTGTTATTTGATTTTCGGAACCAGTTGCTGATTTCTGTATATAATTCTGGAAACTTTTGTCTGAACATCGAGATGGATCTACTTGTATATATTTAGATGCGTATGTTTGGATCTTTTTTTTAAATATGTTTTTGCTGTATTGGAACGCATCACCACATGAATCTATGTGTTGCAATTGCCTGTAACATCAATTTCCATAATCCAAATAGTGATCTCTTCGATATCACTCTCATCCAGATCCTCAACAAAAGATTGGCTGTTTGCTGCAAGTAATAGACTTCCAATATTTCTTCGTAAATAGTGCTAGAAGAAAAGAGTAGGCACTTGCCCTTGAATCATAGCTATCTAGCTGATATCACTGATTGGTAATGACATCAAACTTCCACTCTGGACTCCCAATCTTGAATGCTATTGAAAAACTGGCCACCTGCAGTTGAGTTTGTTGTAGTGTTGTAGCTGTAACCCAGTATGTAATGACTTTCTAGTTCCCCATGCATACAACATGAACTTGATTAACTAATGCATTCTTTGCTCCCATGTCCAGATTCTCTCCTATAATTTCTATAGCATTAGCAGCAGTAACATGTAGAAGTTTGGGGTAGGATCCATAAGTATCTCCATCAGGGATTGGGTCGGCATAGAGCCAACTCTATTCCATATTCAGCTGAAATTATTATAGGCATCTAAATTGGAAGCGGAACATTCATTATAACAATGAAAACCCAATGAGTGCTTCCATTCAAAGAATTTCTCCCTTTCCCCGAATAAGTTACGCCAGTTGCGAGGATCAACCATAGAAATCATGTGCTTTTTGCAATTCTCATACATAAGGAACAATTAAATCGAAGAATAGAGAAATCAAATGAAGATGAAAGCAAAGATGAAGGAAAATAAAGAATTGGAGAGAAAACATAGATTTGATTCTTCATTCAGCATGCTGTAATATGGGATTACAAGTGAAAATAAAGAGTGTAGGAGAGTAAATCTAGATCGCGTGGCTCTTGCCCAATAGTGAAATTGCCTTTAACAGCTGCAACACAATTGACCTTTGAACAAACCCAGTGGTGACATCACCATCCTAACAAACTGTACAAGAGGGCTAAAGAAATAAAACAAATATTTGGGACTAAGCTGTAAATAGATGGAAACACCGGTAAGCTCATGGTGCCATTTGCTAACGTATGCATATATATATATATGTAAGTATGTGATGACTGGGAGGGTGGAATGCAAGGCAATGGATGTGACTACACTGTGCTGCCTTAACTCATTCTCATCTTGGAAAGCTGTTGCAATATATGTTTTTGGAAGCTCGACATGTAGTTTATCTTATGCAATTAAATCAGGCTTCTTGTTTGCCCTCTTTAGAGGAATTAAAGTAGTTCTACGAGGTCATGCTCCAGGTACTTTGAGAAGACGAGGGAGAAAAAAATAGGGAGTATATTAAGCATTAACCTAGTTTAAAGCATATTTTGTAATGACTTTACTTGTTGCGTGATGCTGGTGTTTAATTGAGTAAGCTTGAGATCTGGAGTTTCACACTTGAATGTGTTTTCTCAGCTGGAAAGAGGGAGATCTTTGTCCAACAAGAAAGGATGTAATGAGATCCTTTGATCCAATGCAAAAATTCTAGCTTTTGTTTTTATTGGATGTGGGTTAAAAAGTCTGATGCAACATCTGATCCATTAAATTAATTCTTGAATCCTCCTATTGTCATAAATAATTGTATTTGAAAGCAAGTGTGAGTTCTAGTGGCTGAAAGTATTATTCTTGTATATCTTTCCTGAAAATAGTTTTTATGGCGGAGAAATCTACTGGAGCCAATCCTTTGGGTCAACTGCAAGTCTACAACCTTTGTAACGTGGGGATGATGAACTTACCACTTTTCCTTTCTCCACTTAAATACTAGATTTAGTTACCTTGAAGCAGGGTCGAACTTGTGACCTAAGACACAATTCGCTCAAGCTTTGTCAGTTGAACTAATCGCTAGGGCTGTTTCCAGAAAATATAAACTTATTATATTATGAATTTGCCGCGGAAAGCATCTCCCATTGTTAGTTGGACTTGCAATTCCTGACCAAGTAGATATTGGAAGTTGACTAATAAAATCCTCTATTAATAGCATGAGATGTGATTGAGTTTCTAGAGCATTTTCCCCCTTTAGTATCTTTTCACCCCCCTTGAAAATAGAGGGGATGAAACTGATCAAGTGGGAATAATTCTCTCGTCTTTGGGTCCCTTGGTGAGACAATAGAAACTAAAAGCAGAAGCTTATCAAAATGCTCCTCCAGTGACATACATTCTTATGCTTGTTTGCTTTAAATGGGTGTTACAATTCCCATTGCTTTCTTCATCTTTGCAGATTTTCCTCTTATCTCCAAAAATAACCTTTCAATTTCACTTTTTAATATTGATATAATTAAATCAAACTGAAGAAAATCATTCCTCTGCAGACAGTATTATCAATTAATTTTAGTTTTTTCAAATTCTTATTTTGTTTTTGTTTTACAATAAACTTTAATTCTCTTTTGGATTCCTAATTTAGCTTTGATGCTATTCTCTGCATTTTTCCTCCTTGTGTCTTAAGTTTGACCTTTTTTGCCTTGGATTGATAAAACAAACTGTCTATTTTTCTCTTAATCTGTCAACGGTCACATGTTTAGCAGGTATTTGGTAATTTGAATACAAACATGAAACGTGTCACTTGTAAGAAATGTGCCTCTTATTCTGCTATCAAGAAATTTTGACCAATGTTCAGCTTGGATTTGTCAACTTTTTGGCTTTGACATCCGTTGCAATTGCCATTTGTAGGTTTTATAAATAACATCTATTTGCCCATTTTTCTCATTACCATTTTAATTACTGATAAACATGTTTGTTCAGTAAACCAATGAGATCATGTCTTCAGCTTCTGTACTTTCTTCTTTTTTTCTAATAAGATGTGTGCTGAAGTCCATCATGCCATCAGTGGTAAAAAATAAAGAGGTCTATTGCAATATAATCCGTGATGTTCTCGTTAAACTGTGAACTTGATTGAACAGGGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAGGTAACCTCACTCTCTTAATTGTTAAGTTTGTAAAATATCTGTACCTGGCGAGAAGTAGCATACATCCATTGGAATAATCGAGTTCACACAAATTTCCCAAACACCACAGTTATAAAATAACATCATACCATACTTTTTTAACCATCTCAGGAGAAACGTGCATGATTTCATATGAAATGGAGAAGGGGAGCATAATGCCATATCTATTATTTAATTGTCTAAATCTGTCTTCTGCTTGTCATTGTTACCACCCTTTCTTCTTATAACTGGTATAATGAATGTGATATTATTTGTAGATGTGGATTTAATGACAGTGTATTCTAGTTGTGTTTACTCCTTGTGACAACTTTCTTTTTGATTCTCATGCAGGCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATGGTACGCCATTTGGAGATTATTTATTTTGACATTTTAATCTAAAAGTTCAATGTAGAAACCCTTCCTGTCTTATCAAAACAGATATCCTTTCTGGATAACTAATCCAAAAAGAAAAAATCTCTCTGTATTAATTATGTACTACTTCAATTTTCAATTTTCTCAAGTGATTTTGATTTTTTATGTGTACAACTGCTTTCTCCTTTACCCACTTTGTTATCTTTGAGAGGAAAATTATAACTGGATAGAGCACCACTGTTAGGATAATGTGGAAACAGGAAAGCAAAGTTGAGGAGAGGCCAAGTTGGTTACGTAGTCCTCACTTCAATAATTCAATTGATTGATGACTGATATGTGATGTCATTCTTCATATCCTCTCTTGCTAGGATCTGTTGTTTAGTGGTCATAGTTGCTTGTGTTTACCATTGCGGTTTGCTTGAACATGAGGTTTTGTGAAGTGTAAACTGCATTATGGACCTTAAGAAAGCATGTGAATCTAGTAATTTTTGTTAGTATCTTGCCTTAGTCACTTGCTAGTGAGATCTCTTTGTCCGATTTTGGCATGATGTACTCGATGTAGTAAGTAGTATATCACTCGCCTGGACAGTGCACAACATAAAGAAAGCATTTTCTTAGGGGGCATTTGGTATATAAATGGGACAGGGCTGATCCTATTACTTAGGATGGGATATTAGTGGGGTAATAGAGGCGGAAATGTATGTGTGACTAGTGTTTATATGTTGGATGACACGGCCAATAAATCAGTGAATTTAATTTTTATTTCTCAAATTCTCTATCCGAATTTATTGTTTTGTAAGTCTGTTGTCCACATTTTGATCTTTATATAATCGAAAATAGACAACAAAATTTTACCACATGTACTCAGTGAAACCAAAAGCTATCTGAATTGCATAATTTCAAGACACAACCAGAAATAGCAGAGCCTAACAAAAGCATTGGCGGTGGATAGATTAAGAAAACACAAAAACAATTAGCAGGAGATGGAAAATATCAGGAAAAATTGAAGAAGGAAAAAAGAAATTATCGTAAGGTAGAGTCTGAATGCTTCATTTGGCTGGTAAGGAGCGAGATTGAATATCAGTTTTCTTTCGTTGGAGAAGAAATGTAGTAGTTTAGTTGGGAAGTGTTTGATCAGTGCTGACTGTTGGGGCAAAGGAAGAAAAAAAGGAAGGAAGAAGAGAAGCTACCCGACGAGGGTCAAAGGAAGTCTGTGCTCTAGGGCCTCCAGGGTGGAGGGTCTTGAAATTGTTGTAGTGGATAGGAAGGCGAGGAGGAAGAAGAAGATGAAGACAAGAAAAAAAGAGGAACCTTGCCCTGCTAATTAGTTGTCATGATTGAATCAGCACCTTCACTGCAATTTCCCTTTGCCCAGTTGTTACCCTTCTCTGTTTATATGGGATGTCCATTCAGTCATTGTCTCACATATGGAAGGTAGATTGCAAGCCCACTCCCTTGCGATGAAACAACATCTGGATCTTTATAAAAAGAAGGAAGAAAATCTCAGATAGAATAATCCAATATGGTCTAGTTTTGAATGCTAACCGGGGCACACTTTTGTCTTGCCTAACCTGAGGCTGATCTGGTTCATGAAATGGCTAATGAGCCATTACTATTTTCATTATAATTTTGTTCCATGCATAGACATCTTAAACTGCTTTTCATCACTTTGTAGTATAACAATGAATGACAACTATCTATGGACAAGCTAATTACTTTAATCTGCATAGATCCGATAATCATTTGTTGTAAGCCACAAAGGTTACTGTTTAACATTTTCAATTTTTCATATACCTATCTAATGTGCTTTTTAATTTAATTTTCGTTAATTTGCATACATCACAGAAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTCCGCTCACCCTTTTCGTCAAAGGTTAGTTGTCTCCCTATTTGTTATCGTAGCATCATAGAGTAGTTTATAATATTTATCTATTTATTTTTTCTTAAAAAAGTACACTCATGAGATACCTCTTGAAAGAAAAAGATCAGTCGTGAGCAAAGAGAAATACTTTTTGTAATACGACTTAACTTTGTTCTTTCTCAAAAGAAAAAAAGGAATGGATAACTCTATTGACTTCTTCTTCTCATGCACAACTCCAGCAGCCTTTGGATAAACCAGTTCCAAACGCCACATTACAAGTCACGGGCGCTGTTGGTTGGCGCAGGGAGGGTCTTGTTTATAAGAAGAATGAGGTGGTTTTTGCTGTCTACCTCATAATAAATTTTTTGTAGTTCTCTTATCTGCGCAATTTCTGAAAAATTGGGATTTATATGTTTGACAGGTGTTTCTGGATATAGTAGAAAGTGTTAATCTCCTTATGTCTTCAAAAGGTATAAAGTTCTTGCGTGGCTTGGTGGATGCTTTTTTGTTTTCAGTTTTCCTCTAACAAGACAATTGTAGGTAGTGTGCTCCGTTGTGATGTAACTGGGAAAGTTCTCATGAAATGCTTTCTTTCTGGAATGCCTGATTTGAAGTTGGGGTTAAATGATAAAATTGGTCTTGAGAAAGAGTCGCAGCTTAAATCCCGTCCAACAAAGAGGTAAATTATAATTACTTGTTTTTCATCACTGAACTTGCATCTGCAGAATTCTCTTCTTGAACTACTTCTTCCAGTAGGTTTACTTAAGTGATTTCCAATTTAGGCTACTGTGAAATGAAGATTTTTGTTTGTTTGATATTAGATATCCTCAAAAAGGAAAGAATGATGTCTTTTTTTTTTTTTTGGTCTTTGCATCTAATTGGAAGAGAAATGTTAATGCTCGATAAGGAAATGGGATTGGGTTGTTCAAGAGAATTAACAGCAATTTTCTTGATGTGGAAGGTTCATGAAACTTCCCCCACTGAAGCTAGCTTTTTCTTTTCTTATTTTTAATGAAAAGGTTAAATTTTATTACCGACTACCAAGCAGATGCTAATAAGGGTGCATCATATTAGAGGTCTCCGTTCTATATATTGAAGGAATTCAGCAGATCCAACAAAGAGGCTAAGTTAGATACAACATTCTTCCTACAACACAAATAAAGACTCTTACAGCATCTAGATTTTACCTTTGCAATGTTATCACTCTTATCATTAGAACATCTACCGTTATAGCCAGTATTCCAGGAAATGCAAGTAGGAACTGCATTTTGGTAACCTATGTTGCAAGTAGGAACATCTACTGTTACCTATAATGCATTTTTGGAGGATACGACAGGTGCGACCATATTTTTGTAGAGTCCGAGTAACACAGTCCACAAAAAAGAATGAGCCACCTGATCATCAAGAGAGAACGGTTCTAGCTTTTGAATTAAGTCATATATGCAATCAAGTTCCCAGTCATACGAGTTGCTTCTTAATTGAAACTTCCATCCCTGTTTAGAATAGCAATCGGCTACTGTAGAATCTTGGTAGAGATGGTTGCATAAAGATCCGGAAGTTGCTCCATTAGAGTAGTGTCATCCAGTCATCTATCTGACCACCGACGCTAGCTTAGATGTTTAAAGTTGCTTCTTAATGATGAATGTTTATTCTGAGACCAAAAGGCATATCTTCACATGATGTATGCATTAATATCTTTAGAAAAAAGATTATCTTGTATTCGAGCACTGTTCATGTTGTACTTGTATACTTGGCTTTTCTCAACAACAAAAATGGTATTTCAAGAAAACCCATACATTCTTCTTTTACTACTTATGAAATTTAATTTTTTTATTTTTGTTTTTTTTGAGAAGTTAACGAATTTATGAAATTAAAAATTCTAGCATATTTGTTCCATTCTTCTTAAGTTCAAAAGATACAGATGGTAATAGTAATAGCCTATGATGTCGGGCAGGGACCATAAATAAGATTTACCCGATCACGTAGTTTTACATGTACTTTAAAGCATGTTTTCATAATTTTAAAATGTTTATCTTCAATGTGCCGTATATCTTTATAATCGATCAGAACTAAAATGTTAAGGTATGCTTTAAATGTTGGACTGCTTCTGTCTGTTGTGTTTCCATTTTCTGTAGAGTCCACAACTTACTCTTCCTAGTCTATTGAAACATGTAGTATGTAGCTTTTTCAGTTTGGCCTTCATGTTAGTTTCAGCCTATGCATGGTCGGGTACCATTTTGTGTTGTCACCAGCATAATGCGGTACCATTTTGTGTTGTCACCAACATAATGCATTACTTTGTTACTCTGTGCAGCGGAAAGACTATTGAACTTGATGATGTTACTTTCCACCAATGTGTAAACTTAACGAGATTCAATTCAGAAAAGACTGTCAGCTTTGTACCACCAGATGGTGAATTCGAACTGATGAAGTAAGTTCATACTTCTGTTACTACATGGTTGTTTTTTAGTTCTGTTTTTATTATCTTCTCAAGCTGGAAGCTTGAGTCTGTGGCTCTTCATTTATCTTTTATAGAACAATGCTAAATAGAATTGGAAATTTTGCATGTCAAAGCGAATGATGTTTTACCTTTAACATCATAATATCAATCTTGAATAAGTATCATATAAATAATTATCAACTTTGACTATTTGTCCGTTGAATTGCAAGTTCACTATAATCAGGTGAAATCACAGAGTATTCTGACCGTGCTTCCTATATATATATGAATTTTCTTCTCCGTCTTTCAATTTCTCATTCCATTCCATTCCTGAGACATCTCAAACTAGAATTCACTTCTACATAAGATTATCCATTATACAACATTGACAAGTTTTAACAATTTAAGATCTAAATTACTGTGATCTTTTCTCCGCGAAGTACTTCAAAACAAAAATTTGAACAGTTGGCTTGTTATCTTCTTTAAACATTACTAGAACAATATGAAAGTAAAACTACTGTGCTACAACAACTACGCCTCAATCTCAAACAAGTTGGGGTAGGCTATATTATCAATTTATCATCACTTCTCCATTTAAGCTCAACTCATGTCATTTTCATAACAGTGCCTGAATTTATAATTGCAAACTTTTTTCCCTCAGGTACCGCATTACCGAAGGAGTAAATCTTCCTTTCCGTGTATTGCCAACAATCAAGGAATTAGGTCGTACGCGAATGGAAGTGAATGTTAAGGTTTGTTACACTTCTTTCAATATAGAATAAAATTTATTTCGGAACGTCGGTCCACTTAGATATCATATATAATTTTCTAACATGATTTGTATCCTTTTCAGGTTAAGAGTGTGTTTGGTGCAAAAATGTTTGCTCTTGGAGTTGTCATTAAAGTTCCAGTGCCAAAGCAAACTGCAAAAGCAAGCTTCCAGGTGACATCAGGGAGAGCAAAGTACAATCCATCCATTGACTCTTTGGTGTGGAAGTGAGTGTGCAATAGATTTATCTTTTTTGGTGTAATCCTATAGGGTTACAAACTAAATTTATTCAGGGTTTGACCTCGGGTCTCAAGTTGACTGTGACTTTAACCTATAGTCTAAAAATATGAAATTGACATTCCTCTAGATTGGACATTGTTCTTGAAGATGTTGTACACTTTATGCATTAGGACCTTGGTTGCATGTGAATCAAACTTCTGACATCTAGTCATATAGTGTTAGAAAAACCTATATACTATTTGGATCGTATTTAGTTTATAAATATTTTGGAATTTGATGAATACTTGCCTCTTTATTTGTAACAAAAAATGAATGTACAAATAAATGGAGGGGTTATTGAAGTGACTGGTATCCACAAGCTAATGCCAGGATGTGACATTTGCTTTTTTTTACAATTAGGCATAATAATTGTGTGTGTGTGGTGGTGTGGGGATTTTTTCAGTGTTTGGGCGTGTGACTCCTTTCATATGACAGACATTATTAGGGAAGACCCCCTTTCAAGTGAACGTTTGGAAATTTAGCCAATCTAGATTAATTAAACAGACCTCTTATATATTTGTACTAATTGAGTTGGTGTTTATGGAGTTACAGCCAACCTTTCTATCTGAATGTTACTCAAAAGTCAGCAGAGGTGTAATCCCATTAGTAAAGATCTCAATAGCTCAAGGTGGAGATTAGGTCTTTGCTATCATGTTGTCCATTATCAAAAATCAATATTACGTACGAAATGCTAATTTTCTATTTCTTTCATCCCTTCACTTATGGATCCTTTTTACCATGGAATTTGCTGCTATTAATCAATGGATGAGAGTTTTGTTTGTCAAAGATTATCTTTTTGTTTGGTGGCATTTAATCTCTTTTAGAATGTTTTCACCACATTCTTGTTACAGAAACTTGACAGAGTTACAAAGGGAAACCTGTTAGGCTATACCGGTTTCTTTATGTAATCAAAGAAGAATAATGTGTGCTTCAGAGTGATCCATTTTGTTCAAACTGGAGGCAATTGGAATTTTGTAGAAGCGAATGTTTAGCTTAGACTCTGCCTTTGCAATATGTTATGTAGTCACATGTAGTTTGTCTCTATGTGCATAATTGCTTGCTTATAGATGCTTTCCTTGAAGCAAGTTAAATTTCATACACTTCATCTAAGCTGATCTGTTTATGCTTGAAAGTTGACAAACAGATGTTCTTATACTATCGCTCGTCGTTTTGAACAATATGGAATTTTCTTTGCATGAGCTTTCCAGCCTCTCAAACATGTATTATAATACAGCCTCAAACTGTCTTGATGGAGAATATATTCTCTAGACCTGATTAAAAAAAAAGGGGGGGGGGGGTAGAAATGTGGTGTACAAGAAAGGGAGTTCTGGTGAGAAAAAAGTGGGATCTTCTTGGTCTTGTTGTTGTCCATGAGCAGTGGAAGACTACGACTGCTAAATTTTGTCTTTCTTTGTTGCTTCTAAAAGGAATTAATTGTCCCTTGTTCTTCAAGATATCATAATCCGGTAAAGGGTGTATTATTGACCAGTGTTTGTGTTCATATAGTAGCAAGTAGCATAATTGCTCAGTTCATTTGACAAATATGTTTTTCTTGGCCCCCTTTTTTCGTTTTTATTTTGAAGTATCCATTATTTCAGCTTCTCGACCATGTTGTGGCAGAGATGGAGTGCACACAAATGTTCTCGTCCATTTTGCCACTGATCCAAGATATTGTTGTGAATACTATAATTGTGTATTGACCATCTTCTGTATTCTTTAATAGCATGCCAGCTATACTATTTTACCTTCTTCTGCAGTACATCTAGTTTCTAGTGGTTTGGATCTTCAATATCGGCTTCTTGTTGCAGGATAAAAAAATTTCCTGGGCAAACTGAGTCAACAATGAGTGCTGAAGTGGAGTTGATTTCGACAATAGCAGAGAAGAAGTCCTGGACTAGGCCACCAATTCAGATGGAATTCCAGGTGCCTGAATGTTTTTTTTTTTTTTTGGGGGGGGGGTTGATAACTGTGTTCACTTGGTCAATGATGGCATGTACTCCTAGCTTCAATGGTTCTTGTTCTTGGAGAGGAGGTGGAACCTGAATGTAAGAATTTTGGAATTAGATGCAAATGGCTGAGCCCAATGCTTAGAAAAATATTTCCAGAAGGACTACTAAGAGTAGGTGACTGCTATTGAATCTTGTACCAATCAATGGCAATCATCATCGCTATTTGCTACTACTTTCTTGTGATACAAGTTGTGGAGGAGTTTGGTATTCAGCCTTGTCAAAAATGATATACCAGCCAAGTTTACTAGCTGATTGGAGGAGCTGTACCTTCGTTGGATTAGAAGGGAAGGGAAAATAAAGAAAGGAAATAGTGAGACAATTGTATTCTCATTGTTTTTCATTGACCAAGTTGGACTTAGTGAAAATTAACTTTGTTCTATTATTTTTCTCTCTAGTATCTTTTGTGCTTGAATTTTGTCAGCTCAGTTTTTCTTTCCCTTTTCTCTATCTTCCAATCAAGTGGTAGCACATTTCATTCGTTATTAGGGGAAGCTTTATGGGCACTCACGTGATGGCAATAGTCGTTTCTTTTCTGACTTAAATCAGCATACAATTAGAAAATGTAGGTTATAACAGGATCTGATTTCATAGAATCAGTTATGGCACTGTTTAGGATTACTAACTTCTGAAATTTGTTGTGCTTCTTTGTTTCTATCATGGTTAAACTATTTGTTGCAGCTGCATGACCCACTTTTGTCATTGTAGGTTCCCATGTTTACGGCATCTGGACTTCGAGTTCGCTTTCTCAAGGTATGCTTGCCAAACTTGTAATTAGGGACTGATTTTTGGGTCGAAATGCTGCTTCACTTAGTAACTGTTTGCAGGTATGGGAAAAGAGCGGCTACAACACAGTTGAATGGGTTCGCTATATCACAAAAGCTGGTTCTTATGAGATTAGGTGCTGAAAAATAGGTAAGCTGATCTTTTTTATAGGATCAGTATTATGGAAGCCCAAGGTATAGGGGCGCCATTTTGTTATGCAGGAAATGCAACTTATGCATCTTGTATTTTGAGGGCTTTTAAACATGGTTTGTCTATAGTATATTTGTCCCGTGAAATTCATTGTTCTGTTGTACAGGTTAGTTCTTTACGAGGACTAAGAAGAGGCTTTTGTTTCCATTCTATTTGTATATTTGACATATTCCCCCTTAAA</genome_strand>
        <mrna_strand>AAGAAA-TTAACACACTCCACAAC-CACAAGAAAACT....................................................................................................................................................................................................................................................................................................................................................................................ATCACC-TATTC-TTATTTATTATTATTATTT-AGAA-GCAACAACACAAACT-ACT-TCTCCCAA-AAATATTATTACAACAGAAATAATGGGAAATTGTTGGCCAAAACCT-GT.............................................................................................................................................................................................................................................................................GGATGTTGTTCCTCCCACCTCTAATA...................................................................................................................................................................................................................................................................................................................................................................................................CTCCTCCTCCAGTGA--TCATGAAGAAAC-CAATTAATACATCTCCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGA-AGTAA................................................................................................................................................................................................................................................................................................................................CACAAGG---AG-TGTGG--TGG-C-GCAGCCTAGCGGAGATGGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTCG...............................................................................................................................................................................................................AGGAAAATGGAAG-TTCCGG-CTA......................................................................................................................................................................................................................................................................................................................GCGGAAAA-ATAATTACGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATTTAAAAATGTTTACGCTAG-CGGAATTA-AAGAGC...................................................GCGACGCGTAATTTTCGGCCCGATACGGTGCTAGGTGAGGGAGGAT.........................................................................................................................................................................................................................................................................TTGGTACA-GTATTTAAAGGA-TG--GGTCGATGACAAAAC-ATTTGCACCTTCTAGAGTTGGAGTTGGTATGCCTGT--TGCTGTTAAAAAATCAAATGCAGACAGTG-AACAAGGTCTTAAAGAA.................................................................................................................................................................................................................................................................................................................................................................................TGGC-AGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAG.................................................................................................................................................................................................................................................................................................................................................................................GCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGGGTCCGCTCACCCTTTTCGTCAAAG...................................................................................................................................................................................................................................CAGCCTTTGGATAAACCAGTTCCAAACGCCACATTACAAGTCACGGGCGCTGTTGGTTGGCGCAGGGAGGGTCTTGTTTATAAGAAGAATGAG.........................................................................................GTGTTTCTGGATATAGTAGAAAGTGTTAATCTCCTTATGTCTTCAAAAG......................................................................GTAGTGTGCTCCGTTGTGATGTAACTGGGAAAGTTCTCATGAAATGCTTTCTTTCTGGAATGCCTGATTTGAAGTTGGGGTTAAATGATAAAATTGGTCTTGAGAAAGAGTCGCAGCTTAAATCCCGTCCAACAAAGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAAAGACTATTGAACTTGATGATGTTACTTTCCACCAATGTGTAAACTTAACGAGATTCAATTCAGAAAAGACTGTCAGCTTTGTACCACCAGATGGTGAATTCGAACTGATGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCGCATTACCGAAGGAGTAAATCTTCCTTTCCGTGTATTGCCAACAATCAAGGAATTAGGTCGTACGCGAATGGAAGTGAATGTTAAG.....................................................................................................GTTAAGAGTGTGTTTGGTGCAAAAATGTTTGCTCTTGGAGTTGTCATTAAAGTTCCAGTGCCAAAGCAAACTGCAAAAGCAAGCTTCCAGGTGACATCAGGGAGAGCAAAGTACAATCCATCCATTGACTCTTTGGTGTGGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAAAAAATTTCCTGGGCAAACTGAGTCAACAATGAGTGCTGAAGTGGAGTTGATTTCGACAATAGCAGAGAAGAAGTCCTGGACTAGGCCACCAATTCAGATGGAATTCCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCATGACCCACTTTTGTCATTGTAGGTTCCCATGTTTACGGCATCTGGACTTCGAGTTCGCTTTCTCAAG..........................................................................GTATGGGAAAAGAGCGGCTACAACACAGTTGAATGGGTTCGCTATATCACAAAAGCTGGTTCTTATGAGATTAGGTGCTGAAAAATAG......................................................................................................................................................................GTTAGTTCTTTACGAGGACTAAGAAGAGGCTTTTGTTTCCATTCTATTTGTATATTTGACATATTCCCCCTTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E213270" ref_strand="-" ref_description="SGN-E213270 [cLEC-71-E7]">
      <seq>tcattcagaaaagactgtcagcttgtacccaccagatggtgaattcgaactgatgaagtacngcattaccgaaggagtaaatcttcctttccgtgtattgccaacaatcaaggaattaggtcgtacgcgaatggaagtgaatgttaaggttaagagtgtgtttggtgcaaaaatgtttgctcttggagttgtcattaaagttccagtgccaaagcaaactgcaaaagcaagcttccaggtgacatcagggagagcaaagtacaatccatccattgactctttggtgtggaagataaaaaaatttcctgggcaaactgagtcaacaatgagtgctgaagtggagttgatttcgacaatagcagagaagaagtcctggactaggccaccaattcagatggaattccaggttcccatgtttacggcatctggacttcgagttcgctttctcaaggtatgggaaaagagcggctacaacacagttgaatgggttcgctatatcacaaaagctggttcttatgagattaggtgctgaaaaataggtaagctgatctttttttataggatcagtattatggaagcccaaggtataggggcgccattttgttatgcaggaaatgcaacttatgcatcttgtattttgagggcttttaaacatggtttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="58173" stop="53417"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57873" g_stop="57816" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="0.914"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57815" i_stop="57146" i_length="670">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="0.984" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57145" g_stop="57055" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="148" r_length="91" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57054" i_stop="56954" i_length="101">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56953" g_stop="56811" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="291" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="56810" i_stop="54951" i_length="1860">
            <donor d_prob="0.825" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54950" g_stop="54836" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="406" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54835" i_stop="54045" i_length="791">
            <donor d_prob="0.609" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="54044" g_stop="54000" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="451" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="53999" i_stop="53926" i_length="74">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="53925" g_stop="53717" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="661" r_length="210" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E213270" ref_strand="-">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E213270" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="57873" e_stop="57816"/>
          <exon e_start="57145" e_stop="57055"/>
          <exon e_start="56953" e_stop="56811"/>
          <exon e_start="54950" e_stop="54836"/>
          <exon e_start="54044" e_stop="54000"/>
          <exon e_start="53925" e_stop="53717"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTCAGAAAAGACTGTCAGCTTTGTACCACCAGATGGTGAATTCGAACTGATGAAGTAAGTTCATACTTCTGTTACTACATGGTTGTTTTTTAGTTCTGTTTTTATTATCTTCTCAAGCTGGAAGCTTGAGTCTGTGGCTCTTCATTTATCTTTTATAGAACAATGCTAAATAGAATTGGAAATTTTGCATGTCAAAGCGAATGATGTTTTACCTTTAACATCATAATATCAATCTTGAATAAGTATCATATAAATAATTATCAACTTTGACTATTTGTCCGTTGAATTGCAAGTTCACTATAATCAGGTGAAATCACAGAGTATTCTGACCGTGCTTCCTATATATATATGAATTTTCTTCTCCGTCTTTCAATTTCTCATTCCATTCCATTCCTGAGACATCTCAAACTAGAATTCACTTCTACATAAGATTATCCATTATACAACATTGACAAGTTTTAACAATTTAAGATCTAAATTACTGTGATCTTTTCTCCGCGAAGTACTTCAAAACAAAAATTTGAACAGTTGGCTTGTTATCTTCTTTAAACATTACTAGAACAATATGAAAGTAAAACTACTGTGCTACAACAACTACGCCTCAATCTCAAACAAGTTGGGGTAGGCTATATTATCAATTTATCATCACTTCTCCATTTAAGCTCAACTCATGTCATTTTCATAACAGTGCCTGAATTTATAATTGCAAACTTTTTTCCCTCAGGTACCGCATTACCGAAGGAGTAAATCTTCCTTTCCGTGTATTGCCAACAATCAAGGAATTAGGTCGTACGCGAATGGAAGTGAATGTTAAGGTTTGTTACACTTCTTTCAATATAGAATAAAATTTATTTCGGAACGTCGGTCCACTTAGATATCATATATAATTTTCTAACATGATTTGTATCCTTTTCAGGTTAAGAGTGTGTTTGGTGCAAAAATGTTTGCTCTTGGAGTTGTCATTAAAGTTCCAGTGCCAAAGCAAACTGCAAAAGCAAGCTTCCAGGTGACATCAGGGAGAGCAAAGTACAATCCATCCATTGACTCTTTGGTGTGGAAGTGAGTGTGCAATAGATTTATCTTTTTTGGTGTAATCCTATAGGGTTACAAACTAAATTTATTCAGGGTTTGACCTCGGGTCTCAAGTTGACTGTGACTTTAACCTATAGTCTAAAAATATGAAATTGACATTCCTCTAGATTGGACATTGTTCTTGAAGATGTTGTACACTTTATGCATTAGGACCTTGGTTGCATGTGAATCAAACTTCTGACATCTAGTCATATAGTGTTAGAAAAACCTATATACTATTTGGATCGTATTTAGTTTATAAATATTTTGGAATTTGATGAATACTTGCCTCTTTATTTGTAACAAAAAATGAATGTACAAATAAATGGAGGGGTTATTGAAGTGACTGGTATCCACAAGCTAATGCCAGGATGTGACATTTGCTTTTTTTTACAATTAGGCATAATAATTGTGTGTGTGTGGTGGTGTGGGGATTTTTTCAGTGTTTGGGCGTGTGACTCCTTTCATATGACAGACATTATTAGGGAAGACCCCCTTTCAAGTGAACGTTTGGAAATTTAGCCAATCTAGATTAATTAAACAGACCTCTTATATATTTGTACTAATTGAGTTGGTGTTTATGGAGTTACAGCCAACCTTTCTATCTGAATGTTACTCAAAAGTCAGCAGAGGTGTAATCCCATTAGTAAAGATCTCAATAGCTCAAGGTGGAGATTAGGTCTTTGCTATCATGTTGTCCATTATCAAAAATCAATATTACGTACGAAATGCTAATTTTCTATTTCTTTCATCCCTTCACTTATGGATCCTTTTTACCATGGAATTTGCTGCTATTAATCAATGGATGAGAGTTTTGTTTGTCAAAGATTATCTTTTTGTTTGGTGGCATTTAATCTCTTTTAGAATGTTTTCACCACATTCTTGTTACAGAAACTTGACAGAGTTACAAAGGGAAACCTGTTAGGCTATACCGGTTTCTTTATGTAATCAAAGAAGAATAATGTGTGCTTCAGAGTGATCCATTTTGTTCAAACTGGAGGCAATTGGAATTTTGTAGAAGCGAATGTTTAGCTTAGACTCTGCCTTTGCAATATGTTATGTAGTCACATGTAGTTTGTCTCTATGTGCATAATTGCTTGCTTATAGATGCTTTCCTTGAAGCAAGTTAAATTTCATACACTTCATCTAAGCTGATCTGTTTATGCTTGAAAGTTGACAAACAGATGTTCTTATACTATCGCTCGTCGTTTTGAACAATATGGAATTTTCTTTGCATGAGCTTTCCAGCCTCTCAAACATGTATTATAATACAGCCTCAAACTGTCTTGATGGAGAATATATTCTCTAGACCTGATTAAAAAAAAAGGGGGGGGGGGGTAGAAATGTGGTGTACAAGAAAGGGAGTTCTGGTGAGAAAAAAGTGGGATCTTCTTGGTCTTGTTGTTGTCCATGAGCAGTGGAAGACTACGACTGCTAAATTTTGTCTTTCTTTGTTGCTTCTAAAAGGAATTAATTGTCCCTTGTTCTTCAAGATATCATAATCCGGTAAAGGGTGTATTATTGACCAGTGTTTGTGTTCATATAGTAGCAAGTAGCATAATTGCTCAGTTCATTTGACAAATATGTTTTTCTTGGCCCCCTTTTTTCGTTTTTATTTTGAAGTATCCATTATTTCAGCTTCTCGACCATGTTGTGGCAGAGATGGAGTGCACACAAATGTTCTCGTCCATTTTGCCACTGATCCAAGATATTGTTGTGAATACTATAATTGTGTATTGACCATCTTCTGTATTCTTTAATAGCATGCCAGCTATACTATTTTACCTTCTTCTGCAGTACATCTAGTTTCTAGTGGTTTGGATCTTCAATATCGGCTTCTTGTTGCAGGATAAAAAAATTTCCTGGGCAAACTGAGTCAACAATGAGTGCTGAAGTGGAGTTGATTTCGACAATAGCAGAGAAGAAGTCCTGGACTAGGCCACCAATTCAGATGGAATTCCAGGTGCCTGAATGTTTTTTTTTTTTTTTGGGGGGGGGGTTGATAACTGTGTTCACTTGGTCAATGATGGCATGTACTCCTAGCTTCAATGGTTCTTGTTCTTGGAGAGGAGGTGGAACCTGAATGTAAGAATTTTGGAATTAGATGCAAATGGCTGAGCCCAATGCTTAGAAAAATATTTCCAGAAGGACTACTAAGAGTAGGTGACTGCTATTGAATCTTGTACCAATCAATGGCAATCATCATCGCTATTTGCTACTACTTTCTTGTGATACAAGTTGTGGAGGAGTTTGGTATTCAGCCTTGTCAAAAATGATATACCAGCCAAGTTTACTAGCTGATTGGAGGAGCTGTACCTTCGTTGGATTAGAAGGGAAGGGAAAATAAAGAAAGGAAATAGTGAGACAATTGTATTCTCATTGTTTTTCATTGACCAAGTTGGACTTAGTGAAAATTAACTTTGTTCTATTATTTTTCTCTCTAGTATCTTTTGTGCTTGAATTTTGTCAGCTCAGTTTTTCTTTCCCTTTTCTCTATCTTCCAATCAAGTGGTAGCACATTTCATTCGTTATTAGGGGAAGCTTTATGGGCACTCACGTGATGGCAATAGTCGTTTCTTTTCTGACTTAAATCAGCATACAATTAGAAAATGTAGGTTATAACAGGATCTGATTTCATAGAATCAGTTATGGCACTGTTTAGGATTACTAACTTCTGAAATTTGTTGTGCTTCTTTGTTTCTATCATGGTTAAACTATTTGTTGCAGCTGCATGACCCACTTTTGTCATTGTAGGTTCCCATGTTTACGGCATCTGGACTTCGAGTTCGCTTTCTCAAGGTATGCTTGCCAAACTTGTAATTAGGGACTGATTTTTGGGTCGAAATGCTGCTTCACTTAGTAACTGTTTGCAGGTATGGGAAAAGAGCGGCTACAACACAGTTGAATGGGTTCGCTATATCACAAAAGCTGGTTCTTATGAGATTAGGTGCTGAAAAATAGGTAAGCTGATC-TTTTTTATAGGATCAGTATTATGGAAGCCCAAGGTATAGGGGCGCCATTTTGTTATGCAGGAAATGCAACTTATGCATCTTGTATTTTGAGGGCTTTTAAACATGGTTTG</genome_strand>
        <mrna_strand>TC-ATTCAGAAAAGACTGTCAGCTTGTACCCACCAGATGGTGAATTCGAACTGATGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACNGCATTACCGAAGGAGTAAATCTTCCTTTCCGTGTATTGCCAACAATCAAGGAATTAGGTCGTACGCGAATGGAAGTGAATGTTAAG.....................................................................................................GTTAAGAGTGTGTTTGGTGCAAAAATGTTTGCTCTTGGAGTTGTCATTAAAGTTCCAGTGCCAAAGCAAACTGCAAAAGCAAGCTTCCAGGTGACATCAGGGAGAGCAAAGTACAATCCATCCATTGACTCTTTGGTGTGGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAAAAAATTTCCTGGGCAAACTGAGTCAACAATGAGTGCTGAAGTGGAGTTGATTTCGACAATAGCAGAGAAGAAGTCCTGGACTAGGCCACCAATTCAGATGGAATTCCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCCATGTTTACGGCATCTGGACTTCGAGTTCGCTTTCTCAAG..........................................................................GTATGGGAAAAGAGCGGCTACAACACAGTTGAATGGGTTCGCTATATCACAAAAGCTGGTTCTTATGAGATTAGGTGCTGAAAAATAGGTAAGCTGATCTTTTTTTATAGGATCAGTATTATGGAAGCCCAAGGTATAGGGGCGCCATTTTGTTATGCAGGAAATGCAACTTATGCATCTTGTATTTTGAGGGCTTTTAAACATGGTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E206328" ref_strand="-" ref_description="SGN-E206328 [cLEC-23-K4]">
      <seq>tgtattgccaacaatcaaggaattaggtcgtacgcgaatggaagtgaatgttaaggttaagagtgtgtttggtgcaaaaatgtttgctcttggagttgtcattaaagttccagtgccaaagcaaactgcaaaagcaagcttccaggtgacatcagggagagcaaagtacaatccatccattgactctttggtgtggaagataaaaaaatttcctgggcaaactgagtcaacaatgagtgctgaagtggagttgatttcgacaatagcagagaagaagtcctggactaggccaccaattcagatggaattccaggttcccatgtttacggcatctggacttcgagttcgctttctcaaggtatgggaaaagagcggctacaacacagttgaatgggttcgctatatcacaaaagctggttcttatgagattaggtgctgaaaaataggtaagctgatctttttttataggatcagtattatggaagcccaaggtataggggcgccattttgttatgcaggaaatgcaacttatgcatcttgtattttgagggcttttaaacatggtttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57409" stop="53417"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57109" g_stop="57055" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57054" i_stop="56954" i_length="101">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56953" g_stop="56811" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="198" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56810" i_stop="54951" i_length="1860">
            <donor d_prob="0.825" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="54950" g_stop="54836" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="313" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="54835" i_stop="54045" i_length="791">
            <donor d_prob="0.609" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54044" g_stop="54000" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="358" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="53999" i_stop="53926" i_length="74">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="53925" g_stop="53717" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="568" r_length="210" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E206328" ref_strand="-">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E206328" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="57109" e_stop="57055"/>
          <exon e_start="56953" e_stop="56811"/>
          <exon e_start="54950" e_stop="54836"/>
          <exon e_start="54044" e_stop="54000"/>
          <exon e_start="53925" e_stop="53717"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTATTGCCAACAATCAAGGAATTAGGTCGTACGCGAATGGAAGTGAATGTTAAGGTTTGTTACACTTCTTTCAATATAGAATAAAATTTATTTCGGAACGTCGGTCCACTTAGATATCATATATAATTTTCTAACATGATTTGTATCCTTTTCAGGTTAAGAGTGTGTTTGGTGCAAAAATGTTTGCTCTTGGAGTTGTCATTAAAGTTCCAGTGCCAAAGCAAACTGCAAAAGCAAGCTTCCAGGTGACATCAGGGAGAGCAAAGTACAATCCATCCATTGACTCTTTGGTGTGGAAGTGAGTGTGCAATAGATTTATCTTTTTTGGTGTAATCCTATAGGGTTACAAACTAAATTTATTCAGGGTTTGACCTCGGGTCTCAAGTTGACTGTGACTTTAACCTATAGTCTAAAAATATGAAATTGACATTCCTCTAGATTGGACATTGTTCTTGAAGATGTTGTACACTTTATGCATTAGGACCTTGGTTGCATGTGAATCAAACTTCTGACATCTAGTCATATAGTGTTAGAAAAACCTATATACTATTTGGATCGTATTTAGTTTATAAATATTTTGGAATTTGATGAATACTTGCCTCTTTATTTGTAACAAAAAATGAATGTACAAATAAATGGAGGGGTTATTGAAGTGACTGGTATCCACAAGCTAATGCCAGGATGTGACATTTGCTTTTTTTTACAATTAGGCATAATAATTGTGTGTGTGTGGTGGTGTGGGGATTTTTTCAGTGTTTGGGCGTGTGACTCCTTTCATATGACAGACATTATTAGGGAAGACCCCCTTTCAAGTGAACGTTTGGAAATTTAGCCAATCTAGATTAATTAAACAGACCTCTTATATATTTGTACTAATTGAGTTGGTGTTTATGGAGTTACAGCCAACCTTTCTATCTGAATGTTACTCAAAAGTCAGCAGAGGTGTAATCCCATTAGTAAAGATCTCAATAGCTCAAGGTGGAGATTAGGTCTTTGCTATCATGTTGTCCATTATCAAAAATCAATATTACGTACGAAATGCTAATTTTCTATTTCTTTCATCCCTTCACTTATGGATCCTTTTTACCATGGAATTTGCTGCTATTAATCAATGGATGAGAGTTTTGTTTGTCAAAGATTATCTTTTTGTTTGGTGGCATTTAATCTCTTTTAGAATGTTTTCACCACATTCTTGTTACAGAAACTTGACAGAGTTACAAAGGGAAACCTGTTAGGCTATACCGGTTTCTTTATGTAATCAAAGAAGAATAATGTGTGCTTCAGAGTGATCCATTTTGTTCAAACTGGAGGCAATTGGAATTTTGTAGAAGCGAATGTTTAGCTTAGACTCTGCCTTTGCAATATGTTATGTAGTCACATGTAGTTTGTCTCTATGTGCATAATTGCTTGCTTATAGATGCTTTCCTTGAAGCAAGTTAAATTTCATACACTTCATCTAAGCTGATCTGTTTATGCTTGAAAGTTGACAAACAGATGTTCTTATACTATCGCTCGTCGTTTTGAACAATATGGAATTTTCTTTGCATGAGCTTTCCAGCCTCTCAAACATGTATTATAATACAGCCTCAAACTGTCTTGATGGAGAATATATTCTCTAGACCTGATTAAAAAAAAAGGGGGGGGGGGGTAGAAATGTGGTGTACAAGAAAGGGAGTTCTGGTGAGAAAAAAGTGGGATCTTCTTGGTCTTGTTGTTGTCCATGAGCAGTGGAAGACTACGACTGCTAAATTTTGTCTTTCTTTGTTGCTTCTAAAAGGAATTAATTGTCCCTTGTTCTTCAAGATATCATAATCCGGTAAAGGGTGTATTATTGACCAGTGTTTGTGTTCATATAGTAGCAAGTAGCATAATTGCTCAGTTCATTTGACAAATATGTTTTTCTTGGCCCCCTTTTTTCGTTTTTATTTTGAAGTATCCATTATTTCAGCTTCTCGACCATGTTGTGGCAGAGATGGAGTGCACACAAATGTTCTCGTCCATTTTGCCACTGATCCAAGATATTGTTGTGAATACTATAATTGTGTATTGACCATCTTCTGTATTCTTTAATAGCATGCCAGCTATACTATTTTACCTTCTTCTGCAGTACATCTAGTTTCTAGTGGTTTGGATCTTCAATATCGGCTTCTTGTTGCAGGATAAAAAAATTTCCTGGGCAAACTGAGTCAACAATGAGTGCTGAAGTGGAGTTGATTTCGACAATAGCAGAGAAGAAGTCCTGGACTAGGCCACCAATTCAGATGGAATTCCAGGTGCCTGAATGTTTTTTTTTTTTTTTGGGGGGGGGGTTGATAACTGTGTTCACTTGGTCAATGATGGCATGTACTCCTAGCTTCAATGGTTCTTGTTCTTGGAGAGGAGGTGGAACCTGAATGTAAGAATTTTGGAATTAGATGCAAATGGCTGAGCCCAATGCTTAGAAAAATATTTCCAGAAGGACTACTAAGAGTAGGTGACTGCTATTGAATCTTGTACCAATCAATGGCAATCATCATCGCTATTTGCTACTACTTTCTTGTGATACAAGTTGTGGAGGAGTTTGGTATTCAGCCTTGTCAAAAATGATATACCAGCCAAGTTTACTAGCTGATTGGAGGAGCTGTACCTTCGTTGGATTAGAAGGGAAGGGAAAATAAAGAAAGGAAATAGTGAGACAATTGTATTCTCATTGTTTTTCATTGACCAAGTTGGACTTAGTGAAAATTAACTTTGTTCTATTATTTTTCTCTCTAGTATCTTTTGTGCTTGAATTTTGTCAGCTCAGTTTTTCTTTCCCTTTTCTCTATCTTCCAATCAAGTGGTAGCACATTTCATTCGTTATTAGGGGAAGCTTTATGGGCACTCACGTGATGGCAATAGTCGTTTCTTTTCTGACTTAAATCAGCATACAATTAGAAAATGTAGGTTATAACAGGATCTGATTTCATAGAATCAGTTATGGCACTGTTTAGGATTACTAACTTCTGAAATTTGTTGTGCTTCTTTGTTTCTATCATGGTTAAACTATTTGTTGCAGCTGCATGACCCACTTTTGTCATTGTAGGTTCCCATGTTTACGGCATCTGGACTTCGAGTTCGCTTTCTCAAGGTATGCTTGCCAAACTTGTAATTAGGGACTGATTTTTGGGTCGAAATGCTGCTTCACTTAGTAACTGTTTGCAGGTATGGGAAAAGAGCGGCTACAACACAGTTGAATGGGTTCGCTATATCACAAAAGCTGGTTCTTATGAGATTAGGTGCTGAAAAATAGGTAAGCTGATC-TTTTTTATAGGATCAGTATTATGGAAGCCCAAGGTATAGGGGCGCCATTTTGTTATGCAGGAAATGCAACTTATGCATCTTGTATTTTGAGGGCTTTTAAACATGGTTTG</genome_strand>
        <mrna_strand>TGTATTGCCAACAATCAAGGAATTAGGTCGTACGCGAATGGAAGTGAATGTTAAG.....................................................................................................GTTAAGAGTGTGTTTGGTGCAAAAATGTTTGCTCTTGGAGTTGTCATTAAAGTTCCAGTGCCAAAGCAAACTGCAAAAGCAAGCTTCCAGGTGACATCAGGGAGAGCAAAGTACAATCCATCCATTGACTCTTTGGTGTGGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAAAAAATTTCCTGGGCAAACTGAGTCAACAATGAGTGCTGAAGTGGAGTTGATTTCGACAATAGCAGAGAAGAAGTCCTGGACTAGGCCACCAATTCAGATGGAATTCCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCCATGTTTACGGCATCTGGACTTCGAGTTCGCTTTCTCAAG..........................................................................GTATGGGAAAAGAGCGGCTACAACACAGTTGAATGGGTTCGCTATATCACAAAAGCTGGTTCTTATGAGATTAGGTGCTGAAAAATAGGTAAGCTGATCTTTTTTTATAGGATCAGTATTATGGAAGCCCAAGGTATAGGGGCGCCATTTTGTTATGCAGGAAATGCAACTTATGCATCTTGTATTTTGAGGGCTTTTAAACATGGTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E706223" ref_strand="+" ref_description="SGN-E706223 [FA29BE01]">
      <seq>cggccacattacaagtcacgggcgctgttggttggcgcagggagggtcttgtttataagaagaatgaggtgtttctggatatagtagaaagtgttaatctccttatgtcttcaaaagtgtgctccgttgtgatgtaactgggaaagttctcatgaaatgctttctttctggaatgcctgatttgaagttggggttaaatgataaaattggtcttgagaaagagtcgcagcttaaatcccgtccaacaaagagcggaaagactattgaacttgatgatgttactttccaccaatgtgtaaacttaacgagattcaattcagaaaagactgtcagctttgtaccaccagatggtgaattcgaactgatgaagtaccgcattaccgaaggagtaaatcttcctttccgtgtattgccaacaatcaaggaattaggtcgtacgcgaatggaagtgaatgttaaggttaagagtgtgtttggtgcaaaaatgtttgctcttggagttgtcattaaagttccagtgccaaagcaaactgcaaaagcaagcttccaggtgacatcagggagagcaaagtacaatccatccattgactctttggtgtggaagataaaaaaatttcctgggcaaactgagtcaacaatgagtgctgaagtggagttgatttcgacaatagcagagaagaagtcctggactaggccaccaattcagatggaattccaggttcccatgtttacggcatctggacttcgagttcgctttctcaaggtatgggaaaagagcggctacaacacagttgaatgggttcgctatatcacaaaagctggttctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="60280" stop="53561"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59982" g_stop="59915" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59914" i_stop="59826" i_length="89">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59825" g_stop="59777" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="117" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59776" i_stop="59703" i_length="74">
            <donor d_prob="0.062" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59702" g_stop="59568" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="252" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="59567" i_stop="57933" i_length="1635">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57932" g_stop="57816" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="369" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57815" i_stop="57146" i_length="670">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="57145" g_stop="57055" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="370" r_stop="460" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="57054" i_stop="56954" i_length="101">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="56953" g_stop="56811" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="603" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="56810" i_stop="54951" i_length="1860">
            <donor d_prob="0.825" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="54950" g_stop="54836" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="604" r_stop="718" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="54835" i_stop="54045" i_length="791">
            <donor d_prob="0.609" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="54044" g_stop="54000" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="719" r_stop="763" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="53999" i_stop="53926" i_length="74">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="53925" g_stop="53861" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="764" r_stop="828" r_length="65" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E706223" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>828</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E706223" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59982" e_stop="59915"/>
          <exon e_start="59825" e_stop="59777"/>
          <exon e_start="59702" e_stop="59568"/>
          <exon e_start="57932" e_stop="57816"/>
          <exon e_start="57145" e_stop="57055"/>
          <exon e_start="56953" e_stop="56811"/>
          <exon e_start="54950" e_stop="54836"/>
          <exon e_start="54044" e_stop="54000"/>
          <exon e_start="53925" e_stop="53861"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGCCACATTACAAGTCACGGGCGCTGTTGGTTGGCGCAGGGAGGGTCTTGTTTATAAGAAGAATGAGGTGGTTTTTGCTGTCTACCTCATAATAAATTTTTTGTAGTTCTCTTATCTGCGCAATTTCTGAAAAATTGGGATTTATATGTTTGACAGGTGTTTCTGGATATAGTAGAAAGTGTTAATCTCCTTATGTCTTCAAAAGGTATAAAGTTCTTGCGTGGCTTGGTGGATGCTTTTTTGTTTTCAGTTTTCCTCTAACAAGACAATTGTAGGTAGTGTGCTCCGTTGTGATGTAACTGGGAAAGTTCTCATGAAATGCTTTCTTTCTGGAATGCCTGATTTGAAGTTGGGGTTAAATGATAAAATTGGTCTTGAGAAAGAGTCGCAGCTTAAATCCCGTCCAACAAAGAGGTAAATTATAATTACTTGTTTTTCATCACTGAACTTGCATCTGCAGAATTCTCTTCTTGAACTACTTCTTCCAGTAGGTTTACTTAAGTGATTTCCAATTTAGGCTACTGTGAAATGAAGATTTTTGTTTGTTTGATATTAGATATCCTCAAAAAGGAAAGAATGATGTCTTTTTTTTTTTTTTGGTCTTTGCATCTAATTGGAAGAGAAATGTTAATGCTCGATAAGGAAATGGGATTGGGTTGTTCAAGAGAATTAACAGCAATTTTCTTGATGTGGAAGGTTCATGAAACTTCCCCCACTGAAGCTAGCTTTTTCTTTTCTTATTTTTAATGAAAAGGTTAAATTTTATTACCGACTACCAAGCAGATGCTAATAAGGGTGCATCATATTAGAGGTCTCCGTTCTATATATTGAAGGAATTCAGCAGATCCAACAAAGAGGCTAAGTTAGATACAACATTCTTCCTACAACACAAATAAAGACTCTTACAGCATCTAGATTTTACCTTTGCAATGTTATCACTCTTATCATTAGAACATCTACCGTTATAGCCAGTATTCCAGGAAATGCAAGTAGGAACTGCATTTTGGTAACCTATGTTGCAAGTAGGAACATCTACTGTTACCTATAATGCATTTTTGGAGGATACGACAGGTGCGACCATATTTTTGTAGAGTCCGAGTAACACAGTCCACAAAAAAGAATGAGCCACCTGATCATCAAGAGAGAACGGTTCTAGCTTTTGAATTAAGTCATATATGCAATCAAGTTCCCAGTCATACGAGTTGCTTCTTAATTGAAACTTCCATCCCTGTTTAGAATAGCAATCGGCTACTGTAGAATCTTGGTAGAGATGGTTGCATAAAGATCCGGAAGTTGCTCCATTAGAGTAGTGTCATCCAGTCATCTATCTGACCACCGACGCTAGCTTAGATGTTTAAAGTTGCTTCTTAATGATGAATGTTTATTCTGAGACCAAAAGGCATATCTTCACATGATGTATGCATTAATATCTTTAGAAAAAAGATTATCTTGTATTCGAGCACTGTTCATGTTGTACTTGTATACTTGGCTTTTCTCAACAACAAAAATGGTATTTCAAGAAAACCCATACATTCTTCTTTTACTACTTATGAAATTTAATTTTTTTATTTTTGTTTTTTTTGAGAAGTTAACGAATTTATGAAATTAAAAATTCTAGCATATTTGTTCCATTCTTCTTAAGTTCAAAAGATACAGATGGTAATAGTAATAGCCTATGATGTCGGGCAGGGACCATAAATAAGATTTACCCGATCACGTAGTTTTACATGTACTTTAAAGCATGTTTTCATAATTTTAAAATGTTTATCTTCAATGTGCCGTATATCTTTATAATCGATCAGAACTAAAATGTTAAGGTATGCTTTAAATGTTGGACTGCTTCTGTCTGTTGTGTTTCCATTTTCTGTAGAGTCCACAACTTACTCTTCCTAGTCTATTGAAACATGTAGTATGTAGCTTTTTCAGTTTGGCCTTCATGTTAGTTTCAGCCTATGCATGGTCGGGTACCATTTTGTGTTGTCACCAGCATAATGCGGTACCATTTTGTGTTGTCACCAACATAATGCATTACTTTGTTACTCTGTGCAGCGGAAAGACTATTGAACTTGATGATGTTACTTTCCACCAATGTGTAAACTTAACGAGATTCAATTCAGAAAAGACTGTCAGCTTTGTACCACCAGATGGTGAATTCGAACTGATGAAGTAAGTTCATACTTCTGTTACTACATGGTTGTTTTTTAGTTCTGTTTTTATTATCTTCTCAAGCTGGAAGCTTGAGTCTGTGGCTCTTCATTTATCTTTTATAGAACAATGCTAAATAGAATTGGAAATTTTGCATGTCAAAGCGAATGATGTTTTACCTTTAACATCATAATATCAATCTTGAATAAGTATCATATAAATAATTATCAACTTTGACTATTTGTCCGTTGAATTGCAAGTTCACTATAATCAGGTGAAATCACAGAGTATTCTGACCGTGCTTCCTATATATATATGAATTTTCTTCTCCGTCTTTCAATTTCTCATTCCATTCCATTCCTGAGACATCTCAAACTAGAATTCACTTCTACATAAGATTATCCATTATACAACATTGACAAGTTTTAACAATTTAAGATCTAAATTACTGTGATCTTTTCTCCGCGAAGTACTTCAAAACAAAAATTTGAACAGTTGGCTTGTTATCTTCTTTAAACATTACTAGAACAATATGAAAGTAAAACTACTGTGCTACAACAACTACGCCTCAATCTCAAACAAGTTGGGGTAGGCTATATTATCAATTTATCATCACTTCTCCATTTAAGCTCAACTCATGTCATTTTCATAACAGTGCCTGAATTTATAATTGCAAACTTTTTTCCCTCAGGTACCGCATTACCGAAGGAGTAAATCTTCCTTTCCGTGTATTGCCAACAATCAAGGAATTAGGTCGTACGCGAATGGAAGTGAATGTTAAGGTTTGTTACACTTCTTTCAATATAGAATAAAATTTATTTCGGAACGTCGGTCCACTTAGATATCATATATAATTTTCTAACATGATTTGTATCCTTTTCAGGTTAAGAGTGTGTTTGGTGCAAAAATGTTTGCTCTTGGAGTTGTCATTAAAGTTCCAGTGCCAAAGCAAACTGCAAAAGCAAGCTTCCAGGTGACATCAGGGAGAGCAAAGTACAATCCATCCATTGACTCTTTGGTGTGGAAGTGAGTGTGCAATAGATTTATCTTTTTTGGTGTAATCCTATAGGGTTACAAACTAAATTTATTCAGGGTTTGACCTCGGGTCTCAAGTTGACTGTGACTTTAACCTATAGTCTAAAAATATGAAATTGACATTCCTCTAGATTGGACATTGTTCTTGAAGATGTTGTACACTTTATGCATTAGGACCTTGGTTGCATGTGAATCAAACTTCTGACATCTAGTCATATAGTGTTAGAAAAACCTATATACTATTTGGATCGTATTTAGTTTATAAATATTTTGGAATTTGATGAATACTTGCCTCTTTATTTGTAACAAAAAATGAATGTACAAATAAATGGAGGGGTTATTGAAGTGACTGGTATCCACAAGCTAATGCCAGGATGTGACATTTGCTTTTTTTTACAATTAGGCATAATAATTGTGTGTGTGTGGTGGTGTGGGGATTTTTTCAGTGTTTGGGCGTGTGACTCCTTTCATATGACAGACATTATTAGGGAAGACCCCCTTTCAAGTGAACGTTTGGAAATTTAGCCAATCTAGATTAATTAAACAGACCTCTTATATATTTGTACTAATTGAGTTGGTGTTTATGGAGTTACAGCCAACCTTTCTATCTGAATGTTACTCAAAAGTCAGCAGAGGTGTAATCCCATTAGTAAAGATCTCAATAGCTCAAGGTGGAGATTAGGTCTTTGCTATCATGTTGTCCATTATCAAAAATCAATATTACGTACGAAATGCTAATTTTCTATTTCTTTCATCCCTTCACTTATGGATCCTTTTTACCATGGAATTTGCTGCTATTAATCAATGGATGAGAGTTTTGTTTGTCAAAGATTATCTTTTTGTTTGGTGGCATTTAATCTCTTTTAGAATGTTTTCACCACATTCTTGTTACAGAAACTTGACAGAGTTACAAAGGGAAACCTGTTAGGCTATACCGGTTTCTTTATGTAATCAAAGAAGAATAATGTGTGCTTCAGAGTGATCCATTTTGTTCAAACTGGAGGCAATTGGAATTTTGTAGAAGCGAATGTTTAGCTTAGACTCTGCCTTTGCAATATGTTATGTAGTCACATGTAGTTTGTCTCTATGTGCATAATTGCTTGCTTATAGATGCTTTCCTTGAAGCAAGTTAAATTTCATACACTTCATCTAAGCTGATCTGTTTATGCTTGAAAGTTGACAAACAGATGTTCTTATACTATCGCTCGTCGTTTTGAACAATATGGAATTTTCTTTGCATGAGCTTTCCAGCCTCTCAAACATGTATTATAATACAGCCTCAAACTGTCTTGATGGAGAATATATTCTCTAGACCTGATTAAAAAAAAAGGGGGGGGGGGGTAGAAATGTGGTGTACAAGAAAGGGAGTTCTGGTGAGAAAAAAGTGGGATCTTCTTGGTCTTGTTGTTGTCCATGAGCAGTGGAAGACTACGACTGCTAAATTTTGTCTTTCTTTGTTGCTTCTAAAAGGAATTAATTGTCCCTTGTTCTTCAAGATATCATAATCCGGTAAAGGGTGTATTATTGACCAGTGTTTGTGTTCATATAGTAGCAAGTAGCATAATTGCTCAGTTCATTTGACAAATATGTTTTTCTTGGCCCCCTTTTTTCGTTTTTATTTTGAAGTATCCATTATTTCAGCTTCTCGACCATGTTGTGGCAGAGATGGAGTGCACACAAATGTTCTCGTCCATTTTGCCACTGATCCAAGATATTGTTGTGAATACTATAATTGTGTATTGACCATCTTCTGTATTCTTTAATAGCATGCCAGCTATACTATTTTACCTTCTTCTGCAGTACATCTAGTTTCTAGTGGTTTGGATCTTCAATATCGGCTTCTTGTTGCAGGATAAAAAAATTTCCTGGGCAAACTGAGTCAACAATGAGTGCTGAAGTGGAGTTGATTTCGACAATAGCAGAGAAGAAGTCCTGGACTAGGCCACCAATTCAGATGGAATTCCAGGTGCCTGAATGTTTTTTTTTTTTTTTGGGGGGGGGGTTGATAACTGTGTTCACTTGGTCAATGATGGCATGTACTCCTAGCTTCAATGGTTCTTGTTCTTGGAGAGGAGGTGGAACCTGAATGTAAGAATTTTGGAATTAGATGCAAATGGCTGAGCCCAATGCTTAGAAAAATATTTCCAGAAGGACTACTAAGAGTAGGTGACTGCTATTGAATCTTGTACCAATCAATGGCAATCATCATCGCTATTTGCTACTACTTTCTTGTGATACAAGTTGTGGAGGAGTTTGGTATTCAGCCTTGTCAAAAATGATATACCAGCCAAGTTTACTAGCTGATTGGAGGAGCTGTACCTTCGTTGGATTAGAAGGGAAGGGAAAATAAAGAAAGGAAATAGTGAGACAATTGTATTCTCATTGTTTTTCATTGACCAAGTTGGACTTAGTGAAAATTAACTTTGTTCTATTATTTTTCTCTCTAGTATCTTTTGTGCTTGAATTTTGTCAGCTCAGTTTTTCTTTCCCTTTTCTCTATCTTCCAATCAAGTGGTAGCACATTTCATTCGTTATTAGGGGAAGCTTTATGGGCACTCACGTGATGGCAATAGTCGTTTCTTTTCTGACTTAAATCAGCATACAATTAGAAAATGTAGGTTATAACAGGATCTGATTTCATAGAATCAGTTATGGCACTGTTTAGGATTACTAACTTCTGAAATTTGTTGTGCTTCTTTGTTTCTATCATGGTTAAACTATTTGTTGCAGCTGCATGACCCACTTTTGTCATTGTAGGTTCCCATGTTTACGGCATCTGGACTTCGAGTTCGCTTTCTCAAGGTATGCTTGCCAAACTTGTAATTAGGGACTGATTTTTGGGTCGAAATGCTGCTTCACTTAGTAACTGTTTGCAGGTATGGGAAAAGAGCGGCTACAACACAGTTGAATGGGTTCGCTATATCACAAAAGCTGGTTCTTA</genome_strand>
        <mrna_strand>CGGCCACATTACAAGTCACGGGCGCTGTTGGTTGGCGCAGGGAGGGTCTTGTTTATAAGAAGAATGAG.........................................................................................GTGTTTCTGGATATAGTAGAAAGTGTTAATCTCCTTATGTCTTCAAAAG..........................................................................TGTGCTCCGTTGTGATGTAACTGGGAAAGTTCTCATGAAATGCTTTCTTTCTGGAATGCCTGATTTGAAGTTGGGGTTAAATGATAAAATTGGTCTTGAGAAAGAGTCGCAGCTTAAATCCCGTCCAACAAAGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAAAGACTATTGAACTTGATGATGTTACTTTCCACCAATGTGTAAACTTAACGAGATTCAATTCAGAAAAGACTGTCAGCTTTGTACCACCAGATGGTGAATTCGAACTGATGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCGCATTACCGAAGGAGTAAATCTTCCTTTCCGTGTATTGCCAACAATCAAGGAATTAGGTCGTACGCGAATGGAAGTGAATGTTAAG.....................................................................................................GTTAAGAGTGTGTTTGGTGCAAAAATGTTTGCTCTTGGAGTTGTCATTAAAGTTCCAGTGCCAAAGCAAACTGCAAAAGCAAGCTTCCAGGTGACATCAGGGAGAGCAAAGTACAATCCATCCATTGACTCTTTGGTGTGGAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAAAAAATTTCCTGGGCAAACTGAGTCAACAATGAGTGCTGAAGTGGAGTTGATTTCGACAATAGCAGAGAAGAAGTCCTGGACTAGGCCACCAATTCAGATGGAATTCCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCCATGTTTACGGCATCTGGACTTCGAGTTCGCTTTCTCAAG..........................................................................GTATGGGAAAAGAGCGGCTACAACACAGTTGAATGGGTTCGCTATATCACAAAAGCTGGTTCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E276498" ref_strand="+" ref_description="SGN-E276498 [cLEN-17-C9]">
      <seq>ttctggatatagtagaaagtgttaatctccttatgtcttcaaaaggtagtgtgctccgttgtgatgtaactgggaaagttctcatgaaatgctttctttctggaatgcctgatttgaagttggggttaaatgataaaattggtcttgagaaagagtcgcagcttaaatcccgtccaacaaagagcggaaagactattgaacttgatgatgttactttccaccaatgtgtaaacttaacgagattcaattcagaaaagactgtcagctttgtaccaccagatggtgaattcgaactgatgaagtaccgcattaccgaaggagtaaatcttcctttccgtgtattgccaacaatcaaggaattaggtcgtacgcgaatggaagtgaatgttaaggttaagagtgtgtttggtgcaaaaatgtttgctcttggagttgtcattaaagttccagtgccaaagcaaactgcaaaagcaagcttccaggtgacatcagggagagcaaagtacaatccatccattgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="60121" stop="56525"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59821" g_stop="59777" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="45" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59776" i_stop="59707" i_length="70">
            <donor d_prob="0.062" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59706" g_stop="59568" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="46" r_stop="184" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59567" i_stop="57933" i_length="1635">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57932" g_stop="57816" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="301" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57815" i_stop="57146" i_length="670">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57145" g_stop="57055" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="392" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57054" i_stop="56954" i_length="101">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="56953" g_stop="56825" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="521" r_length="129" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E276498" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>521</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E276498" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59821" e_stop="59777"/>
          <exon e_start="59706" e_stop="59568"/>
          <exon e_start="57932" e_stop="57816"/>
          <exon e_start="57145" e_stop="57055"/>
          <exon e_start="56953" e_stop="56825"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTGGATATAGTAGAAAGTGTTAATCTCCTTATGTCTTCAAAAGGTATAAAGTTCTTGCGTGGCTTGGTGGATGCTTTTTTGTTTTCAGTTTTCCTCTAACAAGACAATTGTAGGTAGTGTGCTCCGTTGTGATGTAACTGGGAAAGTTCTCATGAAATGCTTTCTTTCTGGAATGCCTGATTTGAAGTTGGGGTTAAATGATAAAATTGGTCTTGAGAAAGAGTCGCAGCTTAAATCCCGTCCAACAAAGAGGTAAATTATAATTACTTGTTTTTCATCACTGAACTTGCATCTGCAGAATTCTCTTCTTGAACTACTTCTTCCAGTAGGTTTACTTAAGTGATTTCCAATTTAGGCTACTGTGAAATGAAGATTTTTGTTTGTTTGATATTAGATATCCTCAAAAAGGAAAGAATGATGTCTTTTTTTTTTTTTTGGTCTTTGCATCTAATTGGAAGAGAAATGTTAATGCTCGATAAGGAAATGGGATTGGGTTGTTCAAGAGAATTAACAGCAATTTTCTTGATGTGGAAGGTTCATGAAACTTCCCCCACTGAAGCTAGCTTTTTCTTTTCTTATTTTTAATGAAAAGGTTAAATTTTATTACCGACTACCAAGCAGATGCTAATAAGGGTGCATCATATTAGAGGTCTCCGTTCTATATATTGAAGGAATTCAGCAGATCCAACAAAGAGGCTAAGTTAGATACAACATTCTTCCTACAACACAAATAAAGACTCTTACAGCATCTAGATTTTACCTTTGCAATGTTATCACTCTTATCATTAGAACATCTACCGTTATAGCCAGTATTCCAGGAAATGCAAGTAGGAACTGCATTTTGGTAACCTATGTTGCAAGTAGGAACATCTACTGTTACCTATAATGCATTTTTGGAGGATACGACAGGTGCGACCATATTTTTGTAGAGTCCGAGTAACACAGTCCACAAAAAAGAATGAGCCACCTGATCATCAAGAGAGAACGGTTCTAGCTTTTGAATTAAGTCATATATGCAATCAAGTTCCCAGTCATACGAGTTGCTTCTTAATTGAAACTTCCATCCCTGTTTAGAATAGCAATCGGCTACTGTAGAATCTTGGTAGAGATGGTTGCATAAAGATCCGGAAGTTGCTCCATTAGAGTAGTGTCATCCAGTCATCTATCTGACCACCGACGCTAGCTTAGATGTTTAAAGTTGCTTCTTAATGATGAATGTTTATTCTGAGACCAAAAGGCATATCTTCACATGATGTATGCATTAATATCTTTAGAAAAAAGATTATCTTGTATTCGAGCACTGTTCATGTTGTACTTGTATACTTGGCTTTTCTCAACAACAAAAATGGTATTTCAAGAAAACCCATACATTCTTCTTTTACTACTTATGAAATTTAATTTTTTTATTTTTGTTTTTTTTGAGAAGTTAACGAATTTATGAAATTAAAAATTCTAGCATATTTGTTCCATTCTTCTTAAGTTCAAAAGATACAGATGGTAATAGTAATAGCCTATGATGTCGGGCAGGGACCATAAATAAGATTTACCCGATCACGTAGTTTTACATGTACTTTAAAGCATGTTTTCATAATTTTAAAATGTTTATCTTCAATGTGCCGTATATCTTTATAATCGATCAGAACTAAAATGTTAAGGTATGCTTTAAATGTTGGACTGCTTCTGTCTGTTGTGTTTCCATTTTCTGTAGAGTCCACAACTTACTCTTCCTAGTCTATTGAAACATGTAGTATGTAGCTTTTTCAGTTTGGCCTTCATGTTAGTTTCAGCCTATGCATGGTCGGGTACCATTTTGTGTTGTCACCAGCATAATGCGGTACCATTTTGTGTTGTCACCAACATAATGCATTACTTTGTTACTCTGTGCAGCGGAAAGACTATTGAACTTGATGATGTTACTTTCCACCAATGTGTAAACTTAACGAGATTCAATTCAGAAAAGACTGTCAGCTTTGTACCACCAGATGGTGAATTCGAACTGATGAAGTAAGTTCATACTTCTGTTACTACATGGTTGTTTTTTAGTTCTGTTTTTATTATCTTCTCAAGCTGGAAGCTTGAGTCTGTGGCTCTTCATTTATCTTTTATAGAACAATGCTAAATAGAATTGGAAATTTTGCATGTCAAAGCGAATGATGTTTTACCTTTAACATCATAATATCAATCTTGAATAAGTATCATATAAATAATTATCAACTTTGACTATTTGTCCGTTGAATTGCAAGTTCACTATAATCAGGTGAAATCACAGAGTATTCTGACCGTGCTTCCTATATATATATGAATTTTCTTCTCCGTCTTTCAATTTCTCATTCCATTCCATTCCTGAGACATCTCAAACTAGAATTCACTTCTACATAAGATTATCCATTATACAACATTGACAAGTTTTAACAATTTAAGATCTAAATTACTGTGATCTTTTCTCCGCGAAGTACTTCAAAACAAAAATTTGAACAGTTGGCTTGTTATCTTCTTTAAACATTACTAGAACAATATGAAAGTAAAACTACTGTGCTACAACAACTACGCCTCAATCTCAAACAAGTTGGGGTAGGCTATATTATCAATTTATCATCACTTCTCCATTTAAGCTCAACTCATGTCATTTTCATAACAGTGCCTGAATTTATAATTGCAAACTTTTTTCCCTCAGGTACCGCATTACCGAAGGAGTAAATCTTCCTTTCCGTGTATTGCCAACAATCAAGGAATTAGGTCGTACGCGAATGGAAGTGAATGTTAAGGTTTGTTACACTTCTTTCAATATAGAATAAAATTTATTTCGGAACGTCGGTCCACTTAGATATCATATATAATTTTCTAACATGATTTGTATCCTTTTCAGGTTAAGAGTGTGTTTGGTGCAAAAATGTTTGCTCTTGGAGTTGTCATTAAAGTTCCAGTGCCAAAGCAAACTGCAAAAGCAAGCTTCCAGGTGACATCAGGGAGAGCAAAGTACAATCCATCCATTGAC</genome_strand>
        <mrna_strand>TTCTGGATATAGTAGAAAGTGTTAATCTCCTTATGTCTTCAAAAG......................................................................GTAGTGTGCTCCGTTGTGATGTAACTGGGAAAGTTCTCATGAAATGCTTTCTTTCTGGAATGCCTGATTTGAAGTTGGGGTTAAATGATAAAATTGGTCTTGAGAAAGAGTCGCAGCTTAAATCCCGTCCAACAAAGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAAAGACTATTGAACTTGATGATGTTACTTTCCACCAATGTGTAAACTTAACGAGATTCAATTCAGAAAAGACTGTCAGCTTTGTACCACCAGATGGTGAATTCGAACTGATGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCGCATTACCGAAGGAGTAAATCTTCCTTTCCGTGTATTGCCAACAATCAAGGAATTAGGTCGTACGCGAATGGAAGTGAATGTTAAG.....................................................................................................GTTAAGAGTGTGTTTGGTGCAAAAATGTTTGCTCTTGGAGTTGTCATTAAAGTTCCAGTGCCAAAGCAAACTGCAAAAGCAAGCTTCCAGGTGACATCAGGGAGAGCAAAGTACAATCCATCCATTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E256914" ref_strand="+" ref_description="SGN-E256914 [cLEG-44-G23]">
      <seq>tggaaaagttctcatgaaatgcttcctttctggaatgcctgatctgaagttgggcttaaatgataaaattggtcttgagaaagagtcacaactcaagtcccgtccgactaagagcggtaaaactattgagctcgatgatgttactttccaccaatgtgtaaatttgacgagattcaactcagagaagaccgtcagttttgtcccgcctgatggtgaatttgaattaatgaagtaccgcatcactgaaggagtaaatcttcctttccgtgtattaccaactatcaaagaattaggccgtacacgtatggaagtgaatgttaaggttaagagtgtgtttggtgcaaaaatgtttgctcttggagtagttattaaaattccagtgccaaagcaaactgctaaaacaaacttccaggtgacgtcagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="59981" stop="56553"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59681" g_stop="59568" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="0.912"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59567" i_stop="57933" i_length="1635">
            <donor d_prob="0.999" d_score="0.88"/>
            <acceptor a_prob="0.987" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57932" g_stop="57816" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="231" r_length="117" r_score="0.863"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57815" i_stop="57146" i_length="670">
            <donor d_prob="1.000" d_score="0.82"/>
            <acceptor a_prob="0.984" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57145" g_stop="57055" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="322" r_length="91" r_score="0.912"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57054" i_stop="56954" i_length="101">
            <donor d_prob="0.973" d_score="0.88"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="56953" g_stop="56853" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="423" r_length="101" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E256914" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>423</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E256914" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59681" e_stop="59568"/>
          <exon e_start="57932" e_stop="57816"/>
          <exon e_start="57145" e_stop="57055"/>
          <exon e_start="56953" e_stop="56853"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGAAAGTTCTCATGAAATGCTTTCTTTCTGGAATGCCTGATTTGAAGTTGGGGTTAAATGATAAAATTGGTCTTGAGAAAGAGTCGCAGCTTAAATCCCGTCCAACAAAGAGGTAAATTATAATTACTTGTTTTTCATCACTGAACTTGCATCTGCAGAATTCTCTTCTTGAACTACTTCTTCCAGTAGGTTTACTTAAGTGATTTCCAATTTAGGCTACTGTGAAATGAAGATTTTTGTTTGTTTGATATTAGATATCCTCAAAAAGGAAAGAATGATGTCTTTTTTTTTTTTTTGGTCTTTGCATCTAATTGGAAGAGAAATGTTAATGCTCGATAAGGAAATGGGATTGGGTTGTTCAAGAGAATTAACAGCAATTTTCTTGATGTGGAAGGTTCATGAAACTTCCCCCACTGAAGCTAGCTTTTTCTTTTCTTATTTTTAATGAAAAGGTTAAATTTTATTACCGACTACCAAGCAGATGCTAATAAGGGTGCATCATATTAGAGGTCTCCGTTCTATATATTGAAGGAATTCAGCAGATCCAACAAAGAGGCTAAGTTAGATACAACATTCTTCCTACAACACAAATAAAGACTCTTACAGCATCTAGATTTTACCTTTGCAATGTTATCACTCTTATCATTAGAACATCTACCGTTATAGCCAGTATTCCAGGAAATGCAAGTAGGAACTGCATTTTGGTAACCTATGTTGCAAGTAGGAACATCTACTGTTACCTATAATGCATTTTTGGAGGATACGACAGGTGCGACCATATTTTTGTAGAGTCCGAGTAACACAGTCCACAAAAAAGAATGAGCCACCTGATCATCAAGAGAGAACGGTTCTAGCTTTTGAATTAAGTCATATATGCAATCAAGTTCCCAGTCATACGAGTTGCTTCTTAATTGAAACTTCCATCCCTGTTTAGAATAGCAATCGGCTACTGTAGAATCTTGGTAGAGATGGTTGCATAAAGATCCGGAAGTTGCTCCATTAGAGTAGTGTCATCCAGTCATCTATCTGACCACCGACGCTAGCTTAGATGTTTAAAGTTGCTTCTTAATGATGAATGTTTATTCTGAGACCAAAAGGCATATCTTCACATGATGTATGCATTAATATCTTTAGAAAAAAGATTATCTTGTATTCGAGCACTGTTCATGTTGTACTTGTATACTTGGCTTTTCTCAACAACAAAAATGGTATTTCAAGAAAACCCATACATTCTTCTTTTACTACTTATGAAATTTAATTTTTTTATTTTTGTTTTTTTTGAGAAGTTAACGAATTTATGAAATTAAAAATTCTAGCATATTTGTTCCATTCTTCTTAAGTTCAAAAGATACAGATGGTAATAGTAATAGCCTATGATGTCGGGCAGGGACCATAAATAAGATTTACCCGATCACGTAGTTTTACATGTACTTTAAAGCATGTTTTCATAATTTTAAAATGTTTATCTTCAATGTGCCGTATATCTTTATAATCGATCAGAACTAAAATGTTAAGGTATGCTTTAAATGTTGGACTGCTTCTGTCTGTTGTGTTTCCATTTTCTGTAGAGTCCACAACTTACTCTTCCTAGTCTATTGAAACATGTAGTATGTAGCTTTTTCAGTTTGGCCTTCATGTTAGTTTCAGCCTATGCATGGTCGGGTACCATTTTGTGTTGTCACCAGCATAATGCGGTACCATTTTGTGTTGTCACCAACATAATGCATTACTTTGTTACTCTGTGCAGCGGAAAGACTATTGAACTTGATGATGTTACTTTCCACCAATGTGTAAACTTAACGAGATTCAATTCAGAAAAGACTGTCAGCTTTGTACCACCAGATGGTGAATTCGAACTGATGAAGTAAGTTCATACTTCTGTTACTACATGGTTGTTTTTTAGTTCTGTTTTTATTATCTTCTCAAGCTGGAAGCTTGAGTCTGTGGCTCTTCATTTATCTTTTATAGAACAATGCTAAATAGAATTGGAAATTTTGCATGTCAAAGCGAATGATGTTTTACCTTTAACATCATAATATCAATCTTGAATAAGTATCATATAAATAATTATCAACTTTGACTATTTGTCCGTTGAATTGCAAGTTCACTATAATCAGGTGAAATCACAGAGTATTCTGACCGTGCTTCCTATATATATATGAATTTTCTTCTCCGTCTTTCAATTTCTCATTCCATTCCATTCCTGAGACATCTCAAACTAGAATTCACTTCTACATAAGATTATCCATTATACAACATTGACAAGTTTTAACAATTTAAGATCTAAATTACTGTGATCTTTTCTCCGCGAAGTACTTCAAAACAAAAATTTGAACAGTTGGCTTGTTATCTTCTTTAAACATTACTAGAACAATATGAAAGTAAAACTACTGTGCTACAACAACTACGCCTCAATCTCAAACAAGTTGGGGTAGGCTATATTATCAATTTATCATCACTTCTCCATTTAAGCTCAACTCATGTCATTTTCATAACAGTGCCTGAATTTATAATTGCAAACTTTTTTCCCTCAGGTACCGCATTACCGAAGGAGTAAATCTTCCTTTCCGTGTATTGCCAACAATCAAGGAATTAGGTCGTACGCGAATGGAAGTGAATGTTAAGGTTTGTTACACTTCTTTCAATATAGAATAAAATTTATTTCGGAACGTCGGTCCACTTAGATATCATATATAATTTTCTAACATGATTTGTATCCTTTTCAGGTTAAGAGTGTGTTTGGTGCAAAAATGTTTGCTCTTGGAGTTGTCATTAAAGTTCCAGTGCCAAAGCAAACTGCAAAAGCAAGCTTCCAGGTGACATCAGG</genome_strand>
        <mrna_strand>TGGAAAAGTTCTCATGAAATGCTTCCTTTCTGGAATGCCTGATCTGAAGTTGGGCTTAAATGATAAAATTGGTCTTGAGAAAGAGTCACAACTCAAGTCCCGTCCGACTAAGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTAAAACTATTGAGCTCGATGATGTTACTTTCCACCAATGTGTAAATTTGACGAGATTCAACTCAGAGAAGACCGTCAGTTTTGTCCCGCCTGATGGTGAATTTGAATTAATGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCGCATCACTGAAGGAGTAAATCTTCCTTTCCGTGTATTACCAACTATCAAAGAATTAGGCCGTACACGTATGGAAGTGAATGTTAAG.....................................................................................................GTTAAGAGTGTGTTTGGTGCAAAAATGTTTGCTCTTGGAGTAGTTATTAAAATTCCAGTGCCAAAGCAAACTGCTAAAACAAACTTCCAGGTGACGTCAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E212247" ref_strand="+" ref_description="SGN-E212247 [cLEC-75-F21]">
      <seq>tcgtgccgaattcggcacgagtgtctatattgtgattgtagttagcaccaatgcaaatgtcgcatgtgcattcaagtttgtggttgaggctgttgcactattcaaatcttattttggtggttcttttgacgaagatgccattcgtaataactttgtcctaatttacgagcttttggatgaaataatggactttggttaccctcaaaatctttcacctgaaatcttgaaactctatattactcaggaaggggtccgctcacccttttcgtcaaaggtgtttctggatatagtagaaagtgttaatctccttatgtcttcaaaaggtagtgtgctccgttgtgatgtaactgggaaagttctcatgaaatgctttctttctggaatgcctgatttgaagttggggttaaatgataaaattggtcttgagaaagagtcgcagcttaaatcccgtccaacaaagagcggaaagactattgaacttgatgatgttactttccaccaatgtgtaaacttaacgagattcaattcagaaaagactgtcagctttgtaccaccagatggtgaattcgaactgatgaagtaccgcattaccgaaggagtaaatcttcctttccgtgtattgccaacaatcaaggaattangtcgtacgcgaatggaagtgaatgttaaggttaagagtgtgtttggtgcaaaaatgtttgctctttggagtgtcattaaagttccagtgccaaagcaaactgcaaaagcaagcttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63018" stop="56566"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62716" g_stop="62650" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="88" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62649" i_stop="62281" i_length="369">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62280" g_stop="62190" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="179" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62189" i_stop="60330" i_length="1860">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.588" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60329" g_stop="60235" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="274" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60234" i_stop="59826" i_length="409">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="59825" g_stop="59777" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="323" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="59776" i_stop="59707" i_length="70">
            <donor d_prob="0.062" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="59706" g_stop="59568" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="462" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="59567" i_stop="57933" i_length="1635">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="57932" g_stop="57816" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="463" r_stop="579" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="57815" i_stop="57146" i_length="670">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="57145" g_stop="57055" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="580" r_stop="670" r_length="91" r_score="0.989"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="57054" i_stop="56954" i_length="101">
            <donor d_prob="0.973" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="56953" g_stop="56866" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="671" r_stop="758" r_length="88" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E212247" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>737</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E212247" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62716" e_stop="62650"/>
          <exon e_start="62280" e_stop="62190"/>
          <exon e_start="60329" e_stop="60235"/>
          <exon e_start="59825" e_stop="59777"/>
          <exon e_start="59706" e_stop="59568"/>
          <exon e_start="57932" e_stop="57816"/>
          <exon e_start="57145" e_stop="57055"/>
          <exon e_start="56953" e_stop="56866"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAGGTAACCTCACTCTCTTAATTGTTAAGTTTGTAAAATATCTGTACCTGGCGAGAAGTAGCATACATCCATTGGAATAATCGAGTTCACACAAATTTCCCAAACACCACAGTTATAAAATAACATCATACCATACTTTTTTAACCATCTCAGGAGAAACGTGCATGATTTCATATGAAATGGAGAAGGGGAGCATAATGCCATATCTATTATTTAATTGTCTAAATCTGTCTTCTGCTTGTCATTGTTACCACCCTTTCTTCTTATAACTGGTATAATGAATGTGATATTATTTGTAGATGTGGATTTAATGACAGTGTATTCTAGTTGTGTTTACTCCTTGTGACAACTTTCTTTTTGATTCTCATGCAGGCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATGGTACGCCATTTGGAGATTATTTATTTTGACATTTTAATCTAAAAGTTCAATGTAGAAACCCTTCCTGTCTTATCAAAACAGATATCCTTTCTGGATAACTAATCCAAAAAGAAAAAATCTCTCTGTATTAATTATGTACTACTTCAATTTTCAATTTTCTCAAGTGATTTTGATTTTTTATGTGTACAACTGCTTTCTCCTTTACCCACTTTGTTATCTTTGAGAGGAAAATTATAACTGGATAGAGCACCACTGTTAGGATAATGTGGAAACAGGAAAGCAAAGTTGAGGAGAGGCCAAGTTGGTTACGTAGTCCTCACTTCAATAATTCAATTGATTGATGACTGATATGTGATGTCATTCTTCATATCCTCTCTTGCTAGGATCTGTTGTTTAGTGGTCATAGTTGCTTGTGTTTACCATTGCGGTTTGCTTGAACATGAGGTTTTGTGAAGTGTAAACTGCATTATGGACCTTAAGAAAGCATGTGAATCTAGTAATTTTTGTTAGTATCTTGCCTTAGTCACTTGCTAGTGAGATCTCTTTGTCCGATTTTGGCATGATGTACTCGATGTAGTAAGTAGTATATCACTCGCCTGGACAGTGCACAACATAAAGAAAGCATTTTCTTAGGGGGCATTTGGTATATAAATGGGACAGGGCTGATCCTATTACTTAGGATGGGATATTAGTGGGGTAATAGAGGCGGAAATGTATGTGTGACTAGTGTTTATATGTTGGATGACACGGCCAATAAATCAGTGAATTTAATTTTTATTTCTCAAATTCTCTATCCGAATTTATTGTTTTGTAAGTCTGTTGTCCACATTTTGATCTTTATATAATCGAAAATAGACAACAAAATTTTACCACATGTACTCAGTGAAACCAAAAGCTATCTGAATTGCATAATTTCAAGACACAACCAGAAATAGCAGAGCCTAACAAAAGCATTGGCGGTGGATAGATTAAGAAAACACAAAAACAATTAGCAGGAGATGGAAAATATCAGGAAAAATTGAAGAAGGAAAAAAGAAATTATCGTAAGGTAGAGTCTGAATGCTTCATTTGGCTGGTAAGGAGCGAGATTGAATATCAGTTTTCTTTCGTTGGAGAAGAAATGTAGTAGTTTAGTTGGGAAGTGTTTGATCAGTGCTGACTGTTGGGGCAAAGGAAGAAAAAAAGGAAGGAAGAAGAGAAGCTACCCGACGAGGGTCAAAGGAAGTCTGTGCTCTAGGGCCTCCAGGGTGGAGGGTCTTGAAATTGTTGTAGTGGATAGGAAGGCGAGGAGGAAGAAGAAGATGAAGACAAGAAAAAAAGAGGAACCTTGCCCTGCTAATTAGTTGTCATGATTGAATCAGCACCTTCACTGCAATTTCCCTTTGCCCAGTTGTTACCCTTCTCTGTTTATATGGGATGTCCATTCAGTCATTGTCTCACATATGGAAGGTAGATTGCAAGCCCACTCCCTTGCGATGAAACAACATCTGGATCTTTATAAAAAGAAGGAAGAAAATCTCAGATAGAATAATCCAATATGGTCTAGTTTTGAATGCTAACCGGGGCACACTTTTGTCTTGCCTAACCTGAGGCTGATCTGGTTCATGAAATGGCTAATGAGCCATTACTATTTTCATTATAATTTTGTTCCATGCATAGACATCTTAAACTGCTTTTCATCACTTTGTAGTATAACAATGAATGACAACTATCTATGGACAAGCTAATTACTTTAATCTGCATAGATCCGATAATCATTTGTTGTAAGCCACAAAGGTTACTGTTTAACATTTTCAATTTTTCATATACCTATCTAATGTGCTTTTTAATTTAATTTTCGTTAATTTGCATACATCACAGAAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTCCGCTCACCCTTTTCGTCAAAGGTTAGTTGTCTCCCTATTTGTTATCGTAGCATCATAGAGTAGTTTATAATATTTATCTATTTATTTTTTCTTAAAAAAGTACACTCATGAGATACCTCTTGAAAGAAAAAGATCAGTCGTGAGCAAAGAGAAATACTTTTTGTAATACGACTTAACTTTGTTCTTTCTCAAAAGAAAAAAAGGAATGGATAACTCTATTGACTTCTTCTTCTCATGCACAACTCCAGCAGCCTTTGGATAAACCAGTTCCAAACGCCACATTACAAGTCACGGGCGCTGTTGGTTGGCGCAGGGAGGGTCTTGTTTATAAGAAGAATGAGGTGGTTTTTGCTGTCTACCTCATAATAAATTTTTTGTAGTTCTCTTATCTGCGCAATTTCTGAAAAATTGGGATTTATATGTTTGACAGGTGTTTCTGGATATAGTAGAAAGTGTTAATCTCCTTATGTCTTCAAAAGGTATAAAGTTCTTGCGTGGCTTGGTGGATGCTTTTTTGTTTTCAGTTTTCCTCTAACAAGACAATTGTAGGTAGTGTGCTCCGTTGTGATGTAACTGGGAAAGTTCTCATGAAATGCTTTCTTTCTGGAATGCCTGATTTGAAGTTGGGGTTAAATGATAAAATTGGTCTTGAGAAAGAGTCGCAGCTTAAATCCCGTCCAACAAAGAGGTAAATTATAATTACTTGTTTTTCATCACTGAACTTGCATCTGCAGAATTCTCTTCTTGAACTACTTCTTCCAGTAGGTTTACTTAAGTGATTTCCAATTTAGGCTACTGTGAAATGAAGATTTTTGTTTGTTTGATATTAGATATCCTCAAAAAGGAAAGAATGATGTCTTTTTTTTTTTTTTGGTCTTTGCATCTAATTGGAAGAGAAATGTTAATGCTCGATAAGGAAATGGGATTGGGTTGTTCAAGAGAATTAACAGCAATTTTCTTGATGTGGAAGGTTCATGAAACTTCCCCCACTGAAGCTAGCTTTTTCTTTTCTTATTTTTAATGAAAAGGTTAAATTTTATTACCGACTACCAAGCAGATGCTAATAAGGGTGCATCATATTAGAGGTCTCCGTTCTATATATTGAAGGAATTCAGCAGATCCAACAAAGAGGCTAAGTTAGATACAACATTCTTCCTACAACACAAATAAAGACTCTTACAGCATCTAGATTTTACCTTTGCAATGTTATCACTCTTATCATTAGAACATCTACCGTTATAGCCAGTATTCCAGGAAATGCAAGTAGGAACTGCATTTTGGTAACCTATGTTGCAAGTAGGAACATCTACTGTTACCTATAATGCATTTTTGGAGGATACGACAGGTGCGACCATATTTTTGTAGAGTCCGAGTAACACAGTCCACAAAAAAGAATGAGCCACCTGATCATCAAGAGAGAACGGTTCTAGCTTTTGAATTAAGTCATATATGCAATCAAGTTCCCAGTCATACGAGTTGCTTCTTAATTGAAACTTCCATCCCTGTTTAGAATAGCAATCGGCTACTGTAGAATCTTGGTAGAGATGGTTGCATAAAGATCCGGAAGTTGCTCCATTAGAGTAGTGTCATCCAGTCATCTATCTGACCACCGACGCTAGCTTAGATGTTTAAAGTTGCTTCTTAATGATGAATGTTTATTCTGAGACCAAAAGGCATATCTTCACATGATGTATGCATTAATATCTTTAGAAAAAAGATTATCTTGTATTCGAGCACTGTTCATGTTGTACTTGTATACTTGGCTTTTCTCAACAACAAAAATGGTATTTCAAGAAAACCCATACATTCTTCTTTTACTACTTATGAAATTTAATTTTTTTATTTTTGTTTTTTTTGAGAAGTTAACGAATTTATGAAATTAAAAATTCTAGCATATTTGTTCCATTCTTCTTAAGTTCAAAAGATACAGATGGTAATAGTAATAGCCTATGATGTCGGGCAGGGACCATAAATAAGATTTACCCGATCACGTAGTTTTACATGTACTTTAAAGCATGTTTTCATAATTTTAAAATGTTTATCTTCAATGTGCCGTATATCTTTATAATCGATCAGAACTAAAATGTTAAGGTATGCTTTAAATGTTGGACTGCTTCTGTCTGTTGTGTTTCCATTTTCTGTAGAGTCCACAACTTACTCTTCCTAGTCTATTGAAACATGTAGTATGTAGCTTTTTCAGTTTGGCCTTCATGTTAGTTTCAGCCTATGCATGGTCGGGTACCATTTTGTGTTGTCACCAGCATAATGCGGTACCATTTTGTGTTGTCACCAACATAATGCATTACTTTGTTACTCTGTGCAGCGGAAAGACTATTGAACTTGATGATGTTACTTTCCACCAATGTGTAAACTTAACGAGATTCAATTCAGAAAAGACTGTCAGCTTTGTACCACCAGATGGTGAATTCGAACTGATGAAGTAAGTTCATACTTCTGTTACTACATGGTTGTTTTTTAGTTCTGTTTTTATTATCTTCTCAAGCTGGAAGCTTGAGTCTGTGGCTCTTCATTTATCTTTTATAGAACAATGCTAAATAGAATTGGAAATTTTGCATGTCAAAGCGAATGATGTTTTACCTTTAACATCATAATATCAATCTTGAATAAGTATCATATAAATAATTATCAACTTTGACTATTTGTCCGTTGAATTGCAAGTTCACTATAATCAGGTGAAATCACAGAGTATTCTGACCGTGCTTCCTATATATATATGAATTTTCTTCTCCGTCTTTCAATTTCTCATTCCATTCCATTCCTGAGACATCTCAAACTAGAATTCACTTCTACATAAGATTATCCATTATACAACATTGACAAGTTTTAACAATTTAAGATCTAAATTACTGTGATCTTTTCTCCGCGAAGTACTTCAAAACAAAAATTTGAACAGTTGGCTTGTTATCTTCTTTAAACATTACTAGAACAATATGAAAGTAAAACTACTGTGCTACAACAACTACGCCTCAATCTCAAACAAGTTGGGGTAGGCTATATTATCAATTTATCATCACTTCTCCATTTAAGCTCAACTCATGTCATTTTCATAACAGTGCCTGAATTTATAATTGCAAACTTTTTTCCCTCAGGTACCGCATTACCGAAGGAGTAAATCTTCCTTTCCGTGTATTGCCAACAATCAAGGAATTAGGTCGTACGCGAATGGAAGTGAATGTTAAGGTTTGTTACACTTCTTTCAATATAGAATAAAATTTATTTCGGAACGTCGGTCCACTTAGATATCATATATAATTTTCTAACATGATTTGTATCCTTTTCAGGTTAAGAGTGTGTTTGGTGCAAAAATGTTTGCTCTTGGAGTTGTCATTAAAGTTCCAGTGCCAAAGCAAACTGCAAAAGCAAGCTTCC</genome_strand>
        <mrna_strand>TGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAG.................................................................................................................................................................................................................................................................................................................................................................................GCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTCCGCTCACCCTTTTCGTCAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTTCTGGATATAGTAGAAAGTGTTAATCTCCTTATGTCTTCAAAAG......................................................................GTAGTGTGCTCCGTTGTGATGTAACTGGGAAAGTTCTCATGAAATGCTTTCTTTCTGGAATGCCTGATTTGAAGTTGGGGTTAAATGATAAAATTGGTCTTGAGAAAGAGTCGCAGCTTAAATCCCGTCCAACAAAGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAAAGACTATTGAACTTGATGATGTTACTTTCCACCAATGTGTAAACTTAACGAGATTCAATTCAGAAAAGACTGTCAGCTTTGTACCACCAGATGGTGAATTCGAACTGATGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCGCATTACCGAAGGAGTAAATCTTCCTTTCCGTGTATTGCCAACAATCAAGGAATTANGTCGTACGCGAATGGAAGTGAATGTTAAG.....................................................................................................GTTAAGAGTGTGTTTGGTGCAAAAATGTTTGCTCTTTGGAGTGTCATTAAAGTTCCAGTGCCAAAGCAAACTGCAAAAGCAAGCTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E697662" ref_strand="+" ref_description="SGN-E697662 [FA03CH12]">
      <seq>cgtgtgattgtagttagcaccaatgcaaatgtcgcatgtgcattcaagtttgtggttgaggctgttgcactattcaaatcttattttggtggttcttttgacgaagatgccattcgtaataactttgtcctaatttacgagcttttggatgaaataatggactttggttaccctcaaaatctttcacctgaaatcttgaaactctatattactcaggaaggggtccgctcacccttttcgtcaaagcagcctttggataaaccagttccaaacgccacattacaagtcacgggcgctgttggttggcgcagggagggtcttgtttataagaagaatgaggtgtttctggatatagtagaaagtgttaatctccttatgtcttcaaaaggtagtgtgctccgttgtgatgtaactgggaaagttctcatgaaatgctttctttctggaatgcctgatttgaagttggggttaaatgataaaattggccttgagaaagagtcgcagcttaaatcccgtccaacaaagagcggaaagactattgaacttgatgatgttactttccaccaatgtgtaaacttaacgagattcaattcagaaaagactgtcagctttgtaccaccagatggtgaattcgaactgatgaagtaccgcattaccgaaggagtaaatcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63007" stop="56817"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62709" g_stop="62650" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62649" i_stop="62281" i_length="369">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62280" g_stop="62190" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="151" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62189" i_stop="60330" i_length="1860">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.588" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60329" g_stop="60235" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="246" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60234" i_stop="60008" i_length="227">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60007" g_stop="59915" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="339" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="59914" i_stop="59826" i_length="89">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="59825" g_stop="59777" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="388" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="59776" i_stop="59707" i_length="70">
            <donor d_prob="0.062" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59706" g_stop="59568" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="527" r_length="139" r_score="0.993"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="59567" i_stop="57933" i_length="1635">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="57932" g_stop="57816" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="528" r_stop="644" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="57815" i_stop="57146" i_length="670">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="57145" g_stop="57117" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="645" r_stop="673" r_length="29" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E697662" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>673</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E697662" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62709" e_stop="62650"/>
          <exon e_start="62280" e_stop="62190"/>
          <exon e_start="60329" e_stop="60235"/>
          <exon e_start="60007" e_stop="59915"/>
          <exon e_start="59825" e_stop="59777"/>
          <exon e_start="59706" e_stop="59568"/>
          <exon e_start="57932" e_stop="57816"/>
          <exon e_start="57145" e_stop="57117"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAGGTAACCTCACTCTCTTAATTGTTAAGTTTGTAAAATATCTGTACCTGGCGAGAAGTAGCATACATCCATTGGAATAATCGAGTTCACACAAATTTCCCAAACACCACAGTTATAAAATAACATCATACCATACTTTTTTAACCATCTCAGGAGAAACGTGCATGATTTCATATGAAATGGAGAAGGGGAGCATAATGCCATATCTATTATTTAATTGTCTAAATCTGTCTTCTGCTTGTCATTGTTACCACCCTTTCTTCTTATAACTGGTATAATGAATGTGATATTATTTGTAGATGTGGATTTAATGACAGTGTATTCTAGTTGTGTTTACTCCTTGTGACAACTTTCTTTTTGATTCTCATGCAGGCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATGGTACGCCATTTGGAGATTATTTATTTTGACATTTTAATCTAAAAGTTCAATGTAGAAACCCTTCCTGTCTTATCAAAACAGATATCCTTTCTGGATAACTAATCCAAAAAGAAAAAATCTCTCTGTATTAATTATGTACTACTTCAATTTTCAATTTTCTCAAGTGATTTTGATTTTTTATGTGTACAACTGCTTTCTCCTTTACCCACTTTGTTATCTTTGAGAGGAAAATTATAACTGGATAGAGCACCACTGTTAGGATAATGTGGAAACAGGAAAGCAAAGTTGAGGAGAGGCCAAGTTGGTTACGTAGTCCTCACTTCAATAATTCAATTGATTGATGACTGATATGTGATGTCATTCTTCATATCCTCTCTTGCTAGGATCTGTTGTTTAGTGGTCATAGTTGCTTGTGTTTACCATTGCGGTTTGCTTGAACATGAGGTTTTGTGAAGTGTAAACTGCATTATGGACCTTAAGAAAGCATGTGAATCTAGTAATTTTTGTTAGTATCTTGCCTTAGTCACTTGCTAGTGAGATCTCTTTGTCCGATTTTGGCATGATGTACTCGATGTAGTAAGTAGTATATCACTCGCCTGGACAGTGCACAACATAAAGAAAGCATTTTCTTAGGGGGCATTTGGTATATAAATGGGACAGGGCTGATCCTATTACTTAGGATGGGATATTAGTGGGGTAATAGAGGCGGAAATGTATGTGTGACTAGTGTTTATATGTTGGATGACACGGCCAATAAATCAGTGAATTTAATTTTTATTTCTCAAATTCTCTATCCGAATTTATTGTTTTGTAAGTCTGTTGTCCACATTTTGATCTTTATATAATCGAAAATAGACAACAAAATTTTACCACATGTACTCAGTGAAACCAAAAGCTATCTGAATTGCATAATTTCAAGACACAACCAGAAATAGCAGAGCCTAACAAAAGCATTGGCGGTGGATAGATTAAGAAAACACAAAAACAATTAGCAGGAGATGGAAAATATCAGGAAAAATTGAAGAAGGAAAAAAGAAATTATCGTAAGGTAGAGTCTGAATGCTTCATTTGGCTGGTAAGGAGCGAGATTGAATATCAGTTTTCTTTCGTTGGAGAAGAAATGTAGTAGTTTAGTTGGGAAGTGTTTGATCAGTGCTGACTGTTGGGGCAAAGGAAGAAAAAAAGGAAGGAAGAAGAGAAGCTACCCGACGAGGGTCAAAGGAAGTCTGTGCTCTAGGGCCTCCAGGGTGGAGGGTCTTGAAATTGTTGTAGTGGATAGGAAGGCGAGGAGGAAGAAGAAGATGAAGACAAGAAAAAAAGAGGAACCTTGCCCTGCTAATTAGTTGTCATGATTGAATCAGCACCTTCACTGCAATTTCCCTTTGCCCAGTTGTTACCCTTCTCTGTTTATATGGGATGTCCATTCAGTCATTGTCTCACATATGGAAGGTAGATTGCAAGCCCACTCCCTTGCGATGAAACAACATCTGGATCTTTATAAAAAGAAGGAAGAAAATCTCAGATAGAATAATCCAATATGGTCTAGTTTTGAATGCTAACCGGGGCACACTTTTGTCTTGCCTAACCTGAGGCTGATCTGGTTCATGAAATGGCTAATGAGCCATTACTATTTTCATTATAATTTTGTTCCATGCATAGACATCTTAAACTGCTTTTCATCACTTTGTAGTATAACAATGAATGACAACTATCTATGGACAAGCTAATTACTTTAATCTGCATAGATCCGATAATCATTTGTTGTAAGCCACAAAGGTTACTGTTTAACATTTTCAATTTTTCATATACCTATCTAATGTGCTTTTTAATTTAATTTTCGTTAATTTGCATACATCACAGAAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTCCGCTCACCCTTTTCGTCAAAGGTTAGTTGTCTCCCTATTTGTTATCGTAGCATCATAGAGTAGTTTATAATATTTATCTATTTATTTTTTCTTAAAAAAGTACACTCATGAGATACCTCTTGAAAGAAAAAGATCAGTCGTGAGCAAAGAGAAATACTTTTTGTAATACGACTTAACTTTGTTCTTTCTCAAAAGAAAAAAAGGAATGGATAACTCTATTGACTTCTTCTTCTCATGCACAACTCCAGCAGCCTTTGGATAAACCAGTTCCAAACGCCACATTACAAGTCACGGGCGCTGTTGGTTGGCGCAGGGAGGGTCTTGTTTATAAGAAGAATGAGGTGGTTTTTGCTGTCTACCTCATAATAAATTTTTTGTAGTTCTCTTATCTGCGCAATTTCTGAAAAATTGGGATTTATATGTTTGACAGGTGTTTCTGGATATAGTAGAAAGTGTTAATCTCCTTATGTCTTCAAAAGGTATAAAGTTCTTGCGTGGCTTGGTGGATGCTTTTTTGTTTTCAGTTTTCCTCTAACAAGACAATTGTAGGTAGTGTGCTCCGTTGTGATGTAACTGGGAAAGTTCTCATGAAATGCTTTCTTTCTGGAATGCCTGATTTGAAGTTGGGGTTAAATGATAAAATTGGTCTTGAGAAAGAGTCGCAGCTTAAATCCCGTCCAACAAAGAGGTAAATTATAATTACTTGTTTTTCATCACTGAACTTGCATCTGCAGAATTCTCTTCTTGAACTACTTCTTCCAGTAGGTTTACTTAAGTGATTTCCAATTTAGGCTACTGTGAAATGAAGATTTTTGTTTGTTTGATATTAGATATCCTCAAAAAGGAAAGAATGATGTCTTTTTTTTTTTTTTGGTCTTTGCATCTAATTGGAAGAGAAATGTTAATGCTCGATAAGGAAATGGGATTGGGTTGTTCAAGAGAATTAACAGCAATTTTCTTGATGTGGAAGGTTCATGAAACTTCCCCCACTGAAGCTAGCTTTTTCTTTTCTTATTTTTAATGAAAAGGTTAAATTTTATTACCGACTACCAAGCAGATGCTAATAAGGGTGCATCATATTAGAGGTCTCCGTTCTATATATTGAAGGAATTCAGCAGATCCAACAAAGAGGCTAAGTTAGATACAACATTCTTCCTACAACACAAATAAAGACTCTTACAGCATCTAGATTTTACCTTTGCAATGTTATCACTCTTATCATTAGAACATCTACCGTTATAGCCAGTATTCCAGGAAATGCAAGTAGGAACTGCATTTTGGTAACCTATGTTGCAAGTAGGAACATCTACTGTTACCTATAATGCATTTTTGGAGGATACGACAGGTGCGACCATATTTTTGTAGAGTCCGAGTAACACAGTCCACAAAAAAGAATGAGCCACCTGATCATCAAGAGAGAACGGTTCTAGCTTTTGAATTAAGTCATATATGCAATCAAGTTCCCAGTCATACGAGTTGCTTCTTAATTGAAACTTCCATCCCTGTTTAGAATAGCAATCGGCTACTGTAGAATCTTGGTAGAGATGGTTGCATAAAGATCCGGAAGTTGCTCCATTAGAGTAGTGTCATCCAGTCATCTATCTGACCACCGACGCTAGCTTAGATGTTTAAAGTTGCTTCTTAATGATGAATGTTTATTCTGAGACCAAAAGGCATATCTTCACATGATGTATGCATTAATATCTTTAGAAAAAAGATTATCTTGTATTCGAGCACTGTTCATGTTGTACTTGTATACTTGGCTTTTCTCAACAACAAAAATGGTATTTCAAGAAAACCCATACATTCTTCTTTTACTACTTATGAAATTTAATTTTTTTATTTTTGTTTTTTTTGAGAAGTTAACGAATTTATGAAATTAAAAATTCTAGCATATTTGTTCCATTCTTCTTAAGTTCAAAAGATACAGATGGTAATAGTAATAGCCTATGATGTCGGGCAGGGACCATAAATAAGATTTACCCGATCACGTAGTTTTACATGTACTTTAAAGCATGTTTTCATAATTTTAAAATGTTTATCTTCAATGTGCCGTATATCTTTATAATCGATCAGAACTAAAATGTTAAGGTATGCTTTAAATGTTGGACTGCTTCTGTCTGTTGTGTTTCCATTTTCTGTAGAGTCCACAACTTACTCTTCCTAGTCTATTGAAACATGTAGTATGTAGCTTTTTCAGTTTGGCCTTCATGTTAGTTTCAGCCTATGCATGGTCGGGTACCATTTTGTGTTGTCACCAGCATAATGCGGTACCATTTTGTGTTGTCACCAACATAATGCATTACTTTGTTACTCTGTGCAGCGGAAAGACTATTGAACTTGATGATGTTACTTTCCACCAATGTGTAAACTTAACGAGATTCAATTCAGAAAAGACTGTCAGCTTTGTACCACCAGATGGTGAATTCGAACTGATGAAGTAAGTTCATACTTCTGTTACTACATGGTTGTTTTTTAGTTCTGTTTTTATTATCTTCTCAAGCTGGAAGCTTGAGTCTGTGGCTCTTCATTTATCTTTTATAGAACAATGCTAAATAGAATTGGAAATTTTGCATGTCAAAGCGAATGATGTTTTACCTTTAACATCATAATATCAATCTTGAATAAGTATCATATAAATAATTATCAACTTTGACTATTTGTCCGTTGAATTGCAAGTTCACTATAATCAGGTGAAATCACAGAGTATTCTGACCGTGCTTCCTATATATATATGAATTTTCTTCTCCGTCTTTCAATTTCTCATTCCATTCCATTCCTGAGACATCTCAAACTAGAATTCACTTCTACATAAGATTATCCATTATACAACATTGACAAGTTTTAACAATTTAAGATCTAAATTACTGTGATCTTTTCTCCGCGAAGTACTTCAAAACAAAAATTTGAACAGTTGGCTTGTTATCTTCTTTAAACATTACTAGAACAATATGAAAGTAAAACTACTGTGCTACAACAACTACGCCTCAATCTCAAACAAGTTGGGGTAGGCTATATTATCAATTTATCATCACTTCTCCATTTAAGCTCAACTCATGTCATTTTCATAACAGTGCCTGAATTTATAATTGCAAACTTTTTTCCCTCAGGTACCGCATTACCGAAGGAGTAAATCTTC</genome_strand>
        <mrna_strand>CGTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAG.................................................................................................................................................................................................................................................................................................................................................................................GCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTCCGCTCACCCTTTTCGTCAAAG...................................................................................................................................................................................................................................CAGCCTTTGGATAAACCAGTTCCAAACGCCACATTACAAGTCACGGGCGCTGTTGGTTGGCGCAGGGAGGGTCTTGTTTATAAGAAGAATGAG.........................................................................................GTGTTTCTGGATATAGTAGAAAGTGTTAATCTCCTTATGTCTTCAAAAG......................................................................GTAGTGTGCTCCGTTGTGATGTAACTGGGAAAGTTCTCATGAAATGCTTTCTTTCTGGAATGCCTGATTTGAAGTTGGGGTTAAATGATAAAATTGGCCTTGAGAAAGAGTCGCAGCTTAAATCCCGTCCAACAAAGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAAAGACTATTGAACTTGATGATGTTACTTTCCACCAATGTGTAAACTTAACGAGATTCAATTCAGAAAAGACTGTCAGCTTTGTACCACCAGATGGTGAATTCGAACTGATGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCGCATTACCGAAGGAGTAAATCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E269856" ref_strand="+" ref_description="SGN-E269856 [cLEM-17-B23]">
      <seq>tgtgatgtaactgggaaagttctcatgaaatgctttctttctggaatgcctgatttgaagttggggttaaatgataaaattggtcttgagaaagagtcgcagcttaaatcccgtccaacaaagagcggaaagactattgaacttgatgatgttactttccaccaatgtgtaaacttaacgagattcaattcaaaaaagactgtcagctttgtaccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="59992" stop="57541"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59692" g_stop="59568" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59567" i_stop="57933" i_length="1635">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57932" g_stop="57841" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="217" r_length="92" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E269856" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>217</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E269856" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59692" e_stop="59568"/>
          <exon e_start="57932" e_stop="57841"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGATGTAACTGGGAAAGTTCTCATGAAATGCTTTCTTTCTGGAATGCCTGATTTGAAGTTGGGGTTAAATGATAAAATTGGTCTTGAGAAAGAGTCGCAGCTTAAATCCCGTCCAACAAAGAGGTAAATTATAATTACTTGTTTTTCATCACTGAACTTGCATCTGCAGAATTCTCTTCTTGAACTACTTCTTCCAGTAGGTTTACTTAAGTGATTTCCAATTTAGGCTACTGTGAAATGAAGATTTTTGTTTGTTTGATATTAGATATCCTCAAAAAGGAAAGAATGATGTCTTTTTTTTTTTTTTGGTCTTTGCATCTAATTGGAAGAGAAATGTTAATGCTCGATAAGGAAATGGGATTGGGTTGTTCAAGAGAATTAACAGCAATTTTCTTGATGTGGAAGGTTCATGAAACTTCCCCCACTGAAGCTAGCTTTTTCTTTTCTTATTTTTAATGAAAAGGTTAAATTTTATTACCGACTACCAAGCAGATGCTAATAAGGGTGCATCATATTAGAGGTCTCCGTTCTATATATTGAAGGAATTCAGCAGATCCAACAAAGAGGCTAAGTTAGATACAACATTCTTCCTACAACACAAATAAAGACTCTTACAGCATCTAGATTTTACCTTTGCAATGTTATCACTCTTATCATTAGAACATCTACCGTTATAGCCAGTATTCCAGGAAATGCAAGTAGGAACTGCATTTTGGTAACCTATGTTGCAAGTAGGAACATCTACTGTTACCTATAATGCATTTTTGGAGGATACGACAGGTGCGACCATATTTTTGTAGAGTCCGAGTAACACAGTCCACAAAAAAGAATGAGCCACCTGATCATCAAGAGAGAACGGTTCTAGCTTTTGAATTAAGTCATATATGCAATCAAGTTCCCAGTCATACGAGTTGCTTCTTAATTGAAACTTCCATCCCTGTTTAGAATAGCAATCGGCTACTGTAGAATCTTGGTAGAGATGGTTGCATAAAGATCCGGAAGTTGCTCCATTAGAGTAGTGTCATCCAGTCATCTATCTGACCACCGACGCTAGCTTAGATGTTTAAAGTTGCTTCTTAATGATGAATGTTTATTCTGAGACCAAAAGGCATATCTTCACATGATGTATGCATTAATATCTTTAGAAAAAAGATTATCTTGTATTCGAGCACTGTTCATGTTGTACTTGTATACTTGGCTTTTCTCAACAACAAAAATGGTATTTCAAGAAAACCCATACATTCTTCTTTTACTACTTATGAAATTTAATTTTTTTATTTTTGTTTTTTTTGAGAAGTTAACGAATTTATGAAATTAAAAATTCTAGCATATTTGTTCCATTCTTCTTAAGTTCAAAAGATACAGATGGTAATAGTAATAGCCTATGATGTCGGGCAGGGACCATAAATAAGATTTACCCGATCACGTAGTTTTACATGTACTTTAAAGCATGTTTTCATAATTTTAAAATGTTTATCTTCAATGTGCCGTATATCTTTATAATCGATCAGAACTAAAATGTTAAGGTATGCTTTAAATGTTGGACTGCTTCTGTCTGTTGTGTTTCCATTTTCTGTAGAGTCCACAACTTACTCTTCCTAGTCTATTGAAACATGTAGTATGTAGCTTTTTCAGTTTGGCCTTCATGTTAGTTTCAGCCTATGCATGGTCGGGTACCATTTTGTGTTGTCACCAGCATAATGCGGTACCATTTTGTGTTGTCACCAACATAATGCATTACTTTGTTACTCTGTGCAGCGGAAAGACTATTGAACTTGATGATGTTACTTTCCACCAATGTGTAAACTTAACGAGATTCAATTCAGAAAAGACTGTCAGCTTTGTACCAC</genome_strand>
        <mrna_strand>TGTGATGTAACTGGGAAAGTTCTCATGAAATGCTTTCTTTCTGGAATGCCTGATTTGAAGTTGGGGTTAAATGATAAAATTGGTCTTGAGAAAGAGTCGCAGCTTAAATCCCGTCCAACAAAGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAAAGACTATTGAACTTGATGATGTTACTTTCCACCAATGTGTAAACTTAACGAGATTCAATTCAAAAAAGACTGTCAGCTTTGTACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E250420" ref_strand="+" ref_description="SGN-E250420 [cLEG-6-N23]">
      <seq>aaatgtcgcatgtgcattcaagtttgtggttgaagctgttgcactattcaaatcttattttggtggttcttttgacgaagatgccattcgtaataactttgtcctaatttacgagcttttggatgaaataatggactttggttaccctcaaaatctttcacctgaaatcttgaaactctatattactcaggaaggggtccgctcacccttttcgtcaaagcagcctttggataaaccagttccaaacgccacattacaagtcacgggcgctgttggttggcgcaaggagggtcttgtttataagaagaatgaggtgtttctggatatagtagaaagtgttaatctccttatgtcttcaaaaggtagtgtgctccgttgtgatgtaactgggaaagttctcatgaaatgctttctttctggaatgcctgatttgaagttggggttaaatgataaaattggtcttgaaaaagagtcgcagcttaaatcccgtccaacaaagagcggaaagactattgaacttgatgatgttactttccaccaatgtgtaaacttaacgagattcaattcagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="62983" stop="57563"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62683" g_stop="62650" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="34" r_length="34" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62649" i_stop="62281" i_length="369">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62280" g_stop="62190" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="125" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62189" i_stop="60330" i_length="1860">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.588" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60329" g_stop="60235" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="220" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60234" i_stop="60008" i_length="227">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60007" g_stop="59915" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="313" r_length="93" r_score="0.989"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="59914" i_stop="59826" i_length="89">
            <donor d_prob="0.974" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="59825" g_stop="59777" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="362" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="59776" i_stop="59707" i_length="70">
            <donor d_prob="0.062" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59706" g_stop="59568" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="501" r_length="139" r_score="0.993"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="59567" i_stop="57933" i_length="1635">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="57932" g_stop="57863" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="502" r_stop="571" r_length="70" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E250420" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>571</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E250420" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62683" e_stop="62650"/>
          <exon e_start="62280" e_stop="62190"/>
          <exon e_start="60329" e_stop="60235"/>
          <exon e_start="60007" e_stop="59915"/>
          <exon e_start="59825" e_stop="59777"/>
          <exon e_start="59706" e_stop="59568"/>
          <exon e_start="57932" e_stop="57863"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATGTCGCATGTGCATTCAAGTTTGTGGTTGAGGTAACCTCACTCTCTTAATTGTTAAGTTTGTAAAATATCTGTACCTGGCGAGAAGTAGCATACATCCATTGGAATAATCGAGTTCACACAAATTTCCCAAACACCACAGTTATAAAATAACATCATACCATACTTTTTTAACCATCTCAGGAGAAACGTGCATGATTTCATATGAAATGGAGAAGGGGAGCATAATGCCATATCTATTATTTAATTGTCTAAATCTGTCTTCTGCTTGTCATTGTTACCACCCTTTCTTCTTATAACTGGTATAATGAATGTGATATTATTTGTAGATGTGGATTTAATGACAGTGTATTCTAGTTGTGTTTACTCCTTGTGACAACTTTCTTTTTGATTCTCATGCAGGCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATGGTACGCCATTTGGAGATTATTTATTTTGACATTTTAATCTAAAAGTTCAATGTAGAAACCCTTCCTGTCTTATCAAAACAGATATCCTTTCTGGATAACTAATCCAAAAAGAAAAAATCTCTCTGTATTAATTATGTACTACTTCAATTTTCAATTTTCTCAAGTGATTTTGATTTTTTATGTGTACAACTGCTTTCTCCTTTACCCACTTTGTTATCTTTGAGAGGAAAATTATAACTGGATAGAGCACCACTGTTAGGATAATGTGGAAACAGGAAAGCAAAGTTGAGGAGAGGCCAAGTTGGTTACGTAGTCCTCACTTCAATAATTCAATTGATTGATGACTGATATGTGATGTCATTCTTCATATCCTCTCTTGCTAGGATCTGTTGTTTAGTGGTCATAGTTGCTTGTGTTTACCATTGCGGTTTGCTTGAACATGAGGTTTTGTGAAGTGTAAACTGCATTATGGACCTTAAGAAAGCATGTGAATCTAGTAATTTTTGTTAGTATCTTGCCTTAGTCACTTGCTAGTGAGATCTCTTTGTCCGATTTTGGCATGATGTACTCGATGTAGTAAGTAGTATATCACTCGCCTGGACAGTGCACAACATAAAGAAAGCATTTTCTTAGGGGGCATTTGGTATATAAATGGGACAGGGCTGATCCTATTACTTAGGATGGGATATTAGTGGGGTAATAGAGGCGGAAATGTATGTGTGACTAGTGTTTATATGTTGGATGACACGGCCAATAAATCAGTGAATTTAATTTTTATTTCTCAAATTCTCTATCCGAATTTATTGTTTTGTAAGTCTGTTGTCCACATTTTGATCTTTATATAATCGAAAATAGACAACAAAATTTTACCACATGTACTCAGTGAAACCAAAAGCTATCTGAATTGCATAATTTCAAGACACAACCAGAAATAGCAGAGCCTAACAAAAGCATTGGCGGTGGATAGATTAAGAAAACACAAAAACAATTAGCAGGAGATGGAAAATATCAGGAAAAATTGAAGAAGGAAAAAAGAAATTATCGTAAGGTAGAGTCTGAATGCTTCATTTGGCTGGTAAGGAGCGAGATTGAATATCAGTTTTCTTTCGTTGGAGAAGAAATGTAGTAGTTTAGTTGGGAAGTGTTTGATCAGTGCTGACTGTTGGGGCAAAGGAAGAAAAAAAGGAAGGAAGAAGAGAAGCTACCCGACGAGGGTCAAAGGAAGTCTGTGCTCTAGGGCCTCCAGGGTGGAGGGTCTTGAAATTGTTGTAGTGGATAGGAAGGCGAGGAGGAAGAAGAAGATGAAGACAAGAAAAAAAGAGGAACCTTGCCCTGCTAATTAGTTGTCATGATTGAATCAGCACCTTCACTGCAATTTCCCTTTGCCCAGTTGTTACCCTTCTCTGTTTATATGGGATGTCCATTCAGTCATTGTCTCACATATGGAAGGTAGATTGCAAGCCCACTCCCTTGCGATGAAACAACATCTGGATCTTTATAAAAAGAAGGAAGAAAATCTCAGATAGAATAATCCAATATGGTCTAGTTTTGAATGCTAACCGGGGCACACTTTTGTCTTGCCTAACCTGAGGCTGATCTGGTTCATGAAATGGCTAATGAGCCATTACTATTTTCATTATAATTTTGTTCCATGCATAGACATCTTAAACTGCTTTTCATCACTTTGTAGTATAACAATGAATGACAACTATCTATGGACAAGCTAATTACTTTAATCTGCATAGATCCGATAATCATTTGTTGTAAGCCACAAAGGTTACTGTTTAACATTTTCAATTTTTCATATACCTATCTAATGTGCTTTTTAATTTAATTTTCGTTAATTTGCATACATCACAGAAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTCCGCTCACCCTTTTCGTCAAAGGTTAGTTGTCTCCCTATTTGTTATCGTAGCATCATAGAGTAGTTTATAATATTTATCTATTTATTTTTTCTTAAAAAAGTACACTCATGAGATACCTCTTGAAAGAAAAAGATCAGTCGTGAGCAAAGAGAAATACTTTTTGTAATACGACTTAACTTTGTTCTTTCTCAAAAGAAAAAAAGGAATGGATAACTCTATTGACTTCTTCTTCTCATGCACAACTCCAGCAGCCTTTGGATAAACCAGTTCCAAACGCCACATTACAAGTCACGGGCGCTGTTGGTTGGCGCAGGGAGGGTCTTGTTTATAAGAAGAATGAGGTGGTTTTTGCTGTCTACCTCATAATAAATTTTTTGTAGTTCTCTTATCTGCGCAATTTCTGAAAAATTGGGATTTATATGTTTGACAGGTGTTTCTGGATATAGTAGAAAGTGTTAATCTCCTTATGTCTTCAAAAGGTATAAAGTTCTTGCGTGGCTTGGTGGATGCTTTTTTGTTTTCAGTTTTCCTCTAACAAGACAATTGTAGGTAGTGTGCTCCGTTGTGATGTAACTGGGAAAGTTCTCATGAAATGCTTTCTTTCTGGAATGCCTGATTTGAAGTTGGGGTTAAATGATAAAATTGGTCTTGAGAAAGAGTCGCAGCTTAAATCCCGTCCAACAAAGAGGTAAATTATAATTACTTGTTTTTCATCACTGAACTTGCATCTGCAGAATTCTCTTCTTGAACTACTTCTTCCAGTAGGTTTACTTAAGTGATTTCCAATTTAGGCTACTGTGAAATGAAGATTTTTGTTTGTTTGATATTAGATATCCTCAAAAAGGAAAGAATGATGTCTTTTTTTTTTTTTTGGTCTTTGCATCTAATTGGAAGAGAAATGTTAATGCTCGATAAGGAAATGGGATTGGGTTGTTCAAGAGAATTAACAGCAATTTTCTTGATGTGGAAGGTTCATGAAACTTCCCCCACTGAAGCTAGCTTTTTCTTTTCTTATTTTTAATGAAAAGGTTAAATTTTATTACCGACTACCAAGCAGATGCTAATAAGGGTGCATCATATTAGAGGTCTCCGTTCTATATATTGAAGGAATTCAGCAGATCCAACAAAGAGGCTAAGTTAGATACAACATTCTTCCTACAACACAAATAAAGACTCTTACAGCATCTAGATTTTACCTTTGCAATGTTATCACTCTTATCATTAGAACATCTACCGTTATAGCCAGTATTCCAGGAAATGCAAGTAGGAACTGCATTTTGGTAACCTATGTTGCAAGTAGGAACATCTACTGTTACCTATAATGCATTTTTGGAGGATACGACAGGTGCGACCATATTTTTGTAGAGTCCGAGTAACACAGTCCACAAAAAAGAATGAGCCACCTGATCATCAAGAGAGAACGGTTCTAGCTTTTGAATTAAGTCATATATGCAATCAAGTTCCCAGTCATACGAGTTGCTTCTTAATTGAAACTTCCATCCCTGTTTAGAATAGCAATCGGCTACTGTAGAATCTTGGTAGAGATGGTTGCATAAAGATCCGGAAGTTGCTCCATTAGAGTAGTGTCATCCAGTCATCTATCTGACCACCGACGCTAGCTTAGATGTTTAAAGTTGCTTCTTAATGATGAATGTTTATTCTGAGACCAAAAGGCATATCTTCACATGATGTATGCATTAATATCTTTAGAAAAAAGATTATCTTGTATTCGAGCACTGTTCATGTTGTACTTGTATACTTGGCTTTTCTCAACAACAAAAATGGTATTTCAAGAAAACCCATACATTCTTCTTTTACTACTTATGAAATTTAATTTTTTTATTTTTGTTTTTTTTGAGAAGTTAACGAATTTATGAAATTAAAAATTCTAGCATATTTGTTCCATTCTTCTTAAGTTCAAAAGATACAGATGGTAATAGTAATAGCCTATGATGTCGGGCAGGGACCATAAATAAGATTTACCCGATCACGTAGTTTTACATGTACTTTAAAGCATGTTTTCATAATTTTAAAATGTTTATCTTCAATGTGCCGTATATCTTTATAATCGATCAGAACTAAAATGTTAAGGTATGCTTTAAATGTTGGACTGCTTCTGTCTGTTGTGTTTCCATTTTCTGTAGAGTCCACAACTTACTCTTCCTAGTCTATTGAAACATGTAGTATGTAGCTTTTTCAGTTTGGCCTTCATGTTAGTTTCAGCCTATGCATGGTCGGGTACCATTTTGTGTTGTCACCAGCATAATGCGGTACCATTTTGTGTTGTCACCAACATAATGCATTACTTTGTTACTCTGTGCAGCGGAAAGACTATTGAACTTGATGATGTTACTTTCCACCAATGTGTAAACTTAACGAGATTCAATTCAGAA</genome_strand>
        <mrna_strand>AAATGTCGCATGTGCATTCAAGTTTGTGGTTGAA.................................................................................................................................................................................................................................................................................................................................................................................GCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTCCGCTCACCCTTTTCGTCAAAG...................................................................................................................................................................................................................................CAGCCTTTGGATAAACCAGTTCCAAACGCCACATTACAAGTCACGGGCGCTGTTGGTTGGCGCAAGGAGGGTCTTGTTTATAAGAAGAATGAG.........................................................................................GTGTTTCTGGATATAGTAGAAAGTGTTAATCTCCTTATGTCTTCAAAAG......................................................................GTAGTGTGCTCCGTTGTGATGTAACTGGGAAAGTTCTCATGAAATGCTTTCTTTCTGGAATGCCTGATTTGAAGTTGGGGTTAAATGATAAAATTGGTCTTGAAAAAGAGTCGCAGCTTAAATCCCGTCCAACAAAGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAAAGACTATTGAACTTGATGATGTTACTTTCCACCAATGTGTAAACTTAACGAGATTCAATTCAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E701744" ref_strand="+" ref_description="SGN-E701744 [FA16DC10]">
      <seq>cgacatttctctcccatctacgacaaatctaactgttcttccctacgtttttcatttcattattattgaagaacctttcgaatcatttagatctgacttgatcgaagtttctagatccatttcggtgttgcagccatgcctgtggcagcttcagctgtttacttcctcaatctccgtggcgatgtcctcatcaatcgtctataccgtgacgacgtcgggggtaatatggtagatgcctttcggatgcatataatgcagacaaaagaactcgggacatgtcctgtcaggcagattggaggttgctctttcttctacatgagaattagcaatgtctatattgtgattgtagttagcaccaatgcaaatgtcgcatgtgcattcaagtttgtggttgaggctgttgcactattcaaatcttattttggtggttcttttgacgaagatgccattcgtaataactttgtcctaatttacgagcttttggatgaaataatggactttggttaccctcaaaatctttcacctgaaatcttgaaactctatattactcaggaaggggtccgctcacccttttcgtcaaagcagcctttggataaaccagttccaaacgccacattacaagtcacgggcgctgttggttggcgcagggagggtcttgtttataagaagaatgaggtgtttctggatataatagaaagtgttaatctccttatgtcttccaaaggtagtgtgctcccgttgtgatgtacctgggaaagttctcatgaaatgctttctttctggaatgcctgatttgaagttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="66427" stop="59329"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66127" g_stop="65910" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="218" r_length="218" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65909" i_stop="62828" i_length="3082">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62827" g_stop="62650" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="396" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62649" i_stop="62281" i_length="369">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62280" g_stop="62190" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="487" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62189" i_stop="60330" i_length="1860">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.588" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60329" g_stop="60235" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="488" r_stop="582" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="60234" i_stop="60008" i_length="227">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="60007" g_stop="59915" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="583" r_stop="675" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="59914" i_stop="59826" i_length="89">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59825" g_stop="59777" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="676" r_stop="724" r_length="49" r_score="0.959"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="59776" i_stop="59707" i_length="70">
            <donor d_prob="0.062" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="59706" g_stop="59629" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="725" r_stop="803" r_length="79" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E701744" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>802</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E701744" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66127" e_stop="65910"/>
          <exon e_start="62827" e_stop="62650"/>
          <exon e_start="62280" e_stop="62190"/>
          <exon e_start="60329" e_stop="60235"/>
          <exon e_start="60007" e_stop="59915"/>
          <exon e_start="59825" e_stop="59777"/>
          <exon e_start="59706" e_stop="59629"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGACATTTCTCTCCCATCTACGACAAATCTAACTGTTCTTCCCTACGTTTTTCATTTCATTATTATTGAAGAACCTTTCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGGGTATGTTTCCACTCTCTTCGCACGGATCAGTGTACGTAGAATTGTTATTTGATTTTCGGAACCAGTTGCTGATTTCTGTATATAATTCTGGAAACTTTTGTCTGAACATCGAGATGGATCTACTTGTATATATTTAGATGCGTATGTTTGGATCTTTTTTTTAAATATGTTTTTGCTGTATTGGAACGCATCACCACATGAATCTATGTGTTGCAATTGCCTGTAACATCAATTTCCATAATCCAAATAGTGATCTCTTCGATATCACTCTCATCCAGATCCTCAACAAAAGATTGGCTGTTTGCTGCAAGTAATAGACTTCCAATATTTCTTCGTAAATAGTGCTAGAAGAAAAGAGTAGGCACTTGCCCTTGAATCATAGCTATCTAGCTGATATCACTGATTGGTAATGACATCAAACTTCCACTCTGGACTCCCAATCTTGAATGCTATTGAAAAACTGGCCACCTGCAGTTGAGTTTGTTGTAGTGTTGTAGCTGTAACCCAGTATGTAATGACTTTCTAGTTCCCCATGCATACAACATGAACTTGATTAACTAATGCATTCTTTGCTCCCATGTCCAGATTCTCTCCTATAATTTCTATAGCATTAGCAGCAGTAACATGTAGAAGTTTGGGGTAGGATCCATAAGTATCTCCATCAGGGATTGGGTCGGCATAGAGCCAACTCTATTCCATATTCAGCTGAAATTATTATAGGCATCTAAATTGGAAGCGGAACATTCATTATAACAATGAAAACCCAATGAGTGCTTCCATTCAAAGAATTTCTCCCTTTCCCCGAATAAGTTACGCCAGTTGCGAGGATCAACCATAGAAATCATGTGCTTTTTGCAATTCTCATACATAAGGAACAATTAAATCGAAGAATAGAGAAATCAAATGAAGATGAAAGCAAAGATGAAGGAAAATAAAGAATTGGAGAGAAAACATAGATTTGATTCTTCATTCAGCATGCTGTAATATGGGATTACAAGTGAAAATAAAGAGTGTAGGAGAGTAAATCTAGATCGCGTGGCTCTTGCCCAATAGTGAAATTGCCTTTAACAGCTGCAACACAATTGACCTTTGAACAAACCCAGTGGTGACATCACCATCCTAACAAACTGTACAAGAGGGCTAAAGAAATAAAACAAATATTTGGGACTAAGCTGTAAATAGATGGAAACACCGGTAAGCTCATGGTGCCATTTGCTAACGTATGCATATATATATATATGTAAGTATGTGATGACTGGGAGGGTGGAATGCAAGGCAATGGATGTGACTACACTGTGCTGCCTTAACTCATTCTCATCTTGGAAAGCTGTTGCAATATATGTTTTTGGAAGCTCGACATGTAGTTTATCTTATGCAATTAAATCAGGCTTCTTGTTTGCCCTCTTTAGAGGAATTAAAGTAGTTCTACGAGGTCATGCTCCAGGTACTTTGAGAAGACGAGGGAGAAAAAAATAGGGAGTATATTAAGCATTAACCTAGTTTAAAGCATATTTTGTAATGACTTTACTTGTTGCGTGATGCTGGTGTTTAATTGAGTAAGCTTGAGATCTGGAGTTTCACACTTGAATGTGTTTTCTCAGCTGGAAAGAGGGAGATCTTTGTCCAACAAGAAAGGATGTAATGAGATCCTTTGATCCAATGCAAAAATTCTAGCTTTTGTTTTTATTGGATGTGGGTTAAAAAGTCTGATGCAACATCTGATCCATTAAATTAATTCTTGAATCCTCCTATTGTCATAAATAATTGTATTTGAAAGCAAGTGTGAGTTCTAGTGGCTGAAAGTATTATTCTTGTATATCTTTCCTGAAAATAGTTTTTATGGCGGAGAAATCTACTGGAGCCAATCCTTTGGGTCAACTGCAAGTCTACAACCTTTGTAACGTGGGGATGATGAACTTACCACTTTTCCTTTCTCCACTTAAATACTAGATTTAGTTACCTTGAAGCAGGGTCGAACTTGTGACCTAAGACACAATTCGCTCAAGCTTTGTCAGTTGAACTAATCGCTAGGGCTGTTTCCAGAAAATATAAACTTATTATATTATGAATTTGCCGCGGAAAGCATCTCCCATTGTTAGTTGGACTTGCAATTCCTGACCAAGTAGATATTGGAAGTTGACTAATAAAATCCTCTATTAATAGCATGAGATGTGATTGAGTTTCTAGAGCATTTTCCCCCTTTAGTATCTTTTCACCCCCCTTGAAAATAGAGGGGATGAAACTGATCAAGTGGGAATAATTCTCTCGTCTTTGGGTCCCTTGGTGAGACAATAGAAACTAAAAGCAGAAGCTTATCAAAATGCTCCTCCAGTGACATACATTCTTATGCTTGTTTGCTTTAAATGGGTGTTACAATTCCCATTGCTTTCTTCATCTTTGCAGATTTTCCTCTTATCTCCAAAAATAACCTTTCAATTTCACTTTTTAATATTGATATAATTAAATCAAACTGAAGAAAATCATTCCTCTGCAGACAGTATTATCAATTAATTTTAGTTTTTTCAAATTCTTATTTTGTTTTTGTTTTACAATAAACTTTAATTCTCTTTTGGATTCCTAATTTAGCTTTGATGCTATTCTCTGCATTTTTCCTCCTTGTGTCTTAAGTTTGACCTTTTTTGCCTTGGATTGATAAAACAAACTGTCTATTTTTCTCTTAATCTGTCAACGGTCACATGTTTAGCAGGTATTTGGTAATTTGAATACAAACATGAAACGTGTCACTTGTAAGAAATGTGCCTCTTATTCTGCTATCAAGAAATTTTGACCAATGTTCAGCTTGGATTTGTCAACTTTTTGGCTTTGACATCCGTTGCAATTGCCATTTGTAGGTTTTATAAATAACATCTATTTGCCCATTTTTCTCATTACCATTTTAATTACTGATAAACATGTTTGTTCAGTAAACCAATGAGATCATGTCTTCAGCTTCTGTACTTTCTTCTTTTTTTCTAATAAGATGTGTGCTGAAGTCCATCATGCCATCAGTGGTAAAAAATAAAGAGGTCTATTGCAATATAATCCGTGATGTTCTCGTTAAACTGTGAACTTGATTGAACAGGGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAGGTAACCTCACTCTCTTAATTGTTAAGTTTGTAAAATATCTGTACCTGGCGAGAAGTAGCATACATCCATTGGAATAATCGAGTTCACACAAATTTCCCAAACACCACAGTTATAAAATAACATCATACCATACTTTTTTAACCATCTCAGGAGAAACGTGCATGATTTCATATGAAATGGAGAAGGGGAGCATAATGCCATATCTATTATTTAATTGTCTAAATCTGTCTTCTGCTTGTCATTGTTACCACCCTTTCTTCTTATAACTGGTATAATGAATGTGATATTATTTGTAGATGTGGATTTAATGACAGTGTATTCTAGTTGTGTTTACTCCTTGTGACAACTTTCTTTTTGATTCTCATGCAGGCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATGGTACGCCATTTGGAGATTATTTATTTTGACATTTTAATCTAAAAGTTCAATGTAGAAACCCTTCCTGTCTTATCAAAACAGATATCCTTTCTGGATAACTAATCCAAAAAGAAAAAATCTCTCTGTATTAATTATGTACTACTTCAATTTTCAATTTTCTCAAGTGATTTTGATTTTTTATGTGTACAACTGCTTTCTCCTTTACCCACTTTGTTATCTTTGAGAGGAAAATTATAACTGGATAGAGCACCACTGTTAGGATAATGTGGAAACAGGAAAGCAAAGTTGAGGAGAGGCCAAGTTGGTTACGTAGTCCTCACTTCAATAATTCAATTGATTGATGACTGATATGTGATGTCATTCTTCATATCCTCTCTTGCTAGGATCTGTTGTTTAGTGGTCATAGTTGCTTGTGTTTACCATTGCGGTTTGCTTGAACATGAGGTTTTGTGAAGTGTAAACTGCATTATGGACCTTAAGAAAGCATGTGAATCTAGTAATTTTTGTTAGTATCTTGCCTTAGTCACTTGCTAGTGAGATCTCTTTGTCCGATTTTGGCATGATGTACTCGATGTAGTAAGTAGTATATCACTCGCCTGGACAGTGCACAACATAAAGAAAGCATTTTCTTAGGGGGCATTTGGTATATAAATGGGACAGGGCTGATCCTATTACTTAGGATGGGATATTAGTGGGGTAATAGAGGCGGAAATGTATGTGTGACTAGTGTTTATATGTTGGATGACACGGCCAATAAATCAGTGAATTTAATTTTTATTTCTCAAATTCTCTATCCGAATTTATTGTTTTGTAAGTCTGTTGTCCACATTTTGATCTTTATATAATCGAAAATAGACAACAAAATTTTACCACATGTACTCAGTGAAACCAAAAGCTATCTGAATTGCATAATTTCAAGACACAACCAGAAATAGCAGAGCCTAACAAAAGCATTGGCGGTGGATAGATTAAGAAAACACAAAAACAATTAGCAGGAGATGGAAAATATCAGGAAAAATTGAAGAAGGAAAAAAGAAATTATCGTAAGGTAGAGTCTGAATGCTTCATTTGGCTGGTAAGGAGCGAGATTGAATATCAGTTTTCTTTCGTTGGAGAAGAAATGTAGTAGTTTAGTTGGGAAGTGTTTGATCAGTGCTGACTGTTGGGGCAAAGGAAGAAAAAAAGGAAGGAAGAAGAGAAGCTACCCGACGAGGGTCAAAGGAAGTCTGTGCTCTAGGGCCTCCAGGGTGGAGGGTCTTGAAATTGTTGTAGTGGATAGGAAGGCGAGGAGGAAGAAGAAGATGAAGACAAGAAAAAAAGAGGAACCTTGCCCTGCTAATTAGTTGTCATGATTGAATCAGCACCTTCACTGCAATTTCCCTTTGCCCAGTTGTTACCCTTCTCTGTTTATATGGGATGTCCATTCAGTCATTGTCTCACATATGGAAGGTAGATTGCAAGCCCACTCCCTTGCGATGAAACAACATCTGGATCTTTATAAAAAGAAGGAAGAAAATCTCAGATAGAATAATCCAATATGGTCTAGTTTTGAATGCTAACCGGGGCACACTTTTGTCTTGCCTAACCTGAGGCTGATCTGGTTCATGAAATGGCTAATGAGCCATTACTATTTTCATTATAATTTTGTTCCATGCATAGACATCTTAAACTGCTTTTCATCACTTTGTAGTATAACAATGAATGACAACTATCTATGGACAAGCTAATTACTTTAATCTGCATAGATCCGATAATCATTTGTTGTAAGCCACAAAGGTTACTGTTTAACATTTTCAATTTTTCATATACCTATCTAATGTGCTTTTTAATTTAATTTTCGTTAATTTGCATACATCACAGAAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTCCGCTCACCCTTTTCGTCAAAGGTTAGTTGTCTCCCTATTTGTTATCGTAGCATCATAGAGTAGTTTATAATATTTATCTATTTATTTTTTCTTAAAAAAGTACACTCATGAGATACCTCTTGAAAGAAAAAGATCAGTCGTGAGCAAAGAGAAATACTTTTTGTAATACGACTTAACTTTGTTCTTTCTCAAAAGAAAAAAAGGAATGGATAACTCTATTGACTTCTTCTTCTCATGCACAACTCCAGCAGCCTTTGGATAAACCAGTTCCAAACGCCACATTACAAGTCACGGGCGCTGTTGGTTGGCGCAGGGAGGGTCTTGTTTATAAGAAGAATGAGGTGGTTTTTGCTGTCTACCTCATAATAAATTTTTTGTAGTTCTCTTATCTGCGCAATTTCTGAAAAATTGGGATTTATATGTTTGACAGGTGTTTCTGGATATAGTAGAAAGTGTTAATCTCCTTATGTCTTCAAAAGGTATAAAGTTCTTGCGTGGCTTGGTGGATGCTTTTTTGTTTTCAGTTTTCCTCTAACAAGACAATTGTAGGTAGTGTGCT-CCGTTGTGATGTAACTGGGAAAGTTCTCATGAAATGCTTTCTTTCTGGAATGCCTGATTTGAAGTTGG</genome_strand>
        <mrna_strand>CGACATTTCTCTCCCATCTACGACAAATCTAACTGTTCTTCCCTACGTTTTTCATTTCATTATTATTGAAGAACCTTTCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAG.................................................................................................................................................................................................................................................................................................................................................................................GCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTCCGCTCACCCTTTTCGTCAAAG...................................................................................................................................................................................................................................CAGCCTTTGGATAAACCAGTTCCAAACGCCACATTACAAGTCACGGGCGCTGTTGGTTGGCGCAGGGAGGGTCTTGTTTATAAGAAGAATGAG.........................................................................................GTGTTTCTGGATATAATAGAAAGTGTTAATCTCCTTATGTCTTCCAAAG......................................................................GTAGTGTGCTCCCGTTGTGATGTACCTGGGAAAGTTCTCATGAAATGCTTTCTTTCTGGAATGCCTGATTTGAAGTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E253193" ref_strand="+" ref_description="SGN-E253193 [cLEG-26-D11]">
      <seq>tcgaatcatttagatctgacttgatcgaagtttctagatccatttcggtgttgcagccatgcctgtggcagcttcagctgtttacttcctcaatctccgtggcgatgtcctcatcaatcgtctataccgtgacgacgtcgggggtaatatggtagatgcctttcggatgcatataatgcagacaaaagaactcgggacatgtcctgtcaggcagattggaggttgctctttcttctacatgagaattagcaatgtctatattgtgattgtagttagcaccaatgcaaatgtcgcatgtgcattcaagtttgtggttgaggctgttgcactattcaaatcttattttggtggttcttttgacgaagatgccattcgtaataactttgtcctaatttacgagcttttggatgaaataatggactttggttaccctcaaaatctttcacctgaaatcttgaaactctatattactcaggaaggggtccgctcacccttttcgtcaaagcagcctttggataaaccagttccaaacgccacattacaagtcacgggcgctgttggttggcgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="66350" stop="59645"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66050" g_stop="65910" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="141" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65909" i_stop="62828" i_length="3082">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62827" g_stop="62650" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="319" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62649" i_stop="62281" i_length="369">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62280" g_stop="62190" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="410" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62189" i_stop="60330" i_length="1860">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.588" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60329" g_stop="60235" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="505" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="60234" i_stop="60008" i_length="227">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="60007" g_stop="59945" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="568" r_length="63" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E253193" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E253193" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66050" e_stop="65910"/>
          <exon e_start="62827" e_stop="62650"/>
          <exon e_start="62280" e_stop="62190"/>
          <exon e_start="60329" e_stop="60235"/>
          <exon e_start="60007" e_stop="59945"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGGGTATGTTTCCACTCTCTTCGCACGGATCAGTGTACGTAGAATTGTTATTTGATTTTCGGAACCAGTTGCTGATTTCTGTATATAATTCTGGAAACTTTTGTCTGAACATCGAGATGGATCTACTTGTATATATTTAGATGCGTATGTTTGGATCTTTTTTTTAAATATGTTTTTGCTGTATTGGAACGCATCACCACATGAATCTATGTGTTGCAATTGCCTGTAACATCAATTTCCATAATCCAAATAGTGATCTCTTCGATATCACTCTCATCCAGATCCTCAACAAAAGATTGGCTGTTTGCTGCAAGTAATAGACTTCCAATATTTCTTCGTAAATAGTGCTAGAAGAAAAGAGTAGGCACTTGCCCTTGAATCATAGCTATCTAGCTGATATCACTGATTGGTAATGACATCAAACTTCCACTCTGGACTCCCAATCTTGAATGCTATTGAAAAACTGGCCACCTGCAGTTGAGTTTGTTGTAGTGTTGTAGCTGTAACCCAGTATGTAATGACTTTCTAGTTCCCCATGCATACAACATGAACTTGATTAACTAATGCATTCTTTGCTCCCATGTCCAGATTCTCTCCTATAATTTCTATAGCATTAGCAGCAGTAACATGTAGAAGTTTGGGGTAGGATCCATAAGTATCTCCATCAGGGATTGGGTCGGCATAGAGCCAACTCTATTCCATATTCAGCTGAAATTATTATAGGCATCTAAATTGGAAGCGGAACATTCATTATAACAATGAAAACCCAATGAGTGCTTCCATTCAAAGAATTTCTCCCTTTCCCCGAATAAGTTACGCCAGTTGCGAGGATCAACCATAGAAATCATGTGCTTTTTGCAATTCTCATACATAAGGAACAATTAAATCGAAGAATAGAGAAATCAAATGAAGATGAAAGCAAAGATGAAGGAAAATAAAGAATTGGAGAGAAAACATAGATTTGATTCTTCATTCAGCATGCTGTAATATGGGATTACAAGTGAAAATAAAGAGTGTAGGAGAGTAAATCTAGATCGCGTGGCTCTTGCCCAATAGTGAAATTGCCTTTAACAGCTGCAACACAATTGACCTTTGAACAAACCCAGTGGTGACATCACCATCCTAACAAACTGTACAAGAGGGCTAAAGAAATAAAACAAATATTTGGGACTAAGCTGTAAATAGATGGAAACACCGGTAAGCTCATGGTGCCATTTGCTAACGTATGCATATATATATATATGTAAGTATGTGATGACTGGGAGGGTGGAATGCAAGGCAATGGATGTGACTACACTGTGCTGCCTTAACTCATTCTCATCTTGGAAAGCTGTTGCAATATATGTTTTTGGAAGCTCGACATGTAGTTTATCTTATGCAATTAAATCAGGCTTCTTGTTTGCCCTCTTTAGAGGAATTAAAGTAGTTCTACGAGGTCATGCTCCAGGTACTTTGAGAAGACGAGGGAGAAAAAAATAGGGAGTATATTAAGCATTAACCTAGTTTAAAGCATATTTTGTAATGACTTTACTTGTTGCGTGATGCTGGTGTTTAATTGAGTAAGCTTGAGATCTGGAGTTTCACACTTGAATGTGTTTTCTCAGCTGGAAAGAGGGAGATCTTTGTCCAACAAGAAAGGATGTAATGAGATCCTTTGATCCAATGCAAAAATTCTAGCTTTTGTTTTTATTGGATGTGGGTTAAAAAGTCTGATGCAACATCTGATCCATTAAATTAATTCTTGAATCCTCCTATTGTCATAAATAATTGTATTTGAAAGCAAGTGTGAGTTCTAGTGGCTGAAAGTATTATTCTTGTATATCTTTCCTGAAAATAGTTTTTATGGCGGAGAAATCTACTGGAGCCAATCCTTTGGGTCAACTGCAAGTCTACAACCTTTGTAACGTGGGGATGATGAACTTACCACTTTTCCTTTCTCCACTTAAATACTAGATTTAGTTACCTTGAAGCAGGGTCGAACTTGTGACCTAAGACACAATTCGCTCAAGCTTTGTCAGTTGAACTAATCGCTAGGGCTGTTTCCAGAAAATATAAACTTATTATATTATGAATTTGCCGCGGAAAGCATCTCCCATTGTTAGTTGGACTTGCAATTCCTGACCAAGTAGATATTGGAAGTTGACTAATAAAATCCTCTATTAATAGCATGAGATGTGATTGAGTTTCTAGAGCATTTTCCCCCTTTAGTATCTTTTCACCCCCCTTGAAAATAGAGGGGATGAAACTGATCAAGTGGGAATAATTCTCTCGTCTTTGGGTCCCTTGGTGAGACAATAGAAACTAAAAGCAGAAGCTTATCAAAATGCTCCTCCAGTGACATACATTCTTATGCTTGTTTGCTTTAAATGGGTGTTACAATTCCCATTGCTTTCTTCATCTTTGCAGATTTTCCTCTTATCTCCAAAAATAACCTTTCAATTTCACTTTTTAATATTGATATAATTAAATCAAACTGAAGAAAATCATTCCTCTGCAGACAGTATTATCAATTAATTTTAGTTTTTTCAAATTCTTATTTTGTTTTTGTTTTACAATAAACTTTAATTCTCTTTTGGATTCCTAATTTAGCTTTGATGCTATTCTCTGCATTTTTCCTCCTTGTGTCTTAAGTTTGACCTTTTTTGCCTTGGATTGATAAAACAAACTGTCTATTTTTCTCTTAATCTGTCAACGGTCACATGTTTAGCAGGTATTTGGTAATTTGAATACAAACATGAAACGTGTCACTTGTAAGAAATGTGCCTCTTATTCTGCTATCAAGAAATTTTGACCAATGTTCAGCTTGGATTTGTCAACTTTTTGGCTTTGACATCCGTTGCAATTGCCATTTGTAGGTTTTATAAATAACATCTATTTGCCCATTTTTCTCATTACCATTTTAATTACTGATAAACATGTTTGTTCAGTAAACCAATGAGATCATGTCTTCAGCTTCTGTACTTTCTTCTTTTTTTCTAATAAGATGTGTGCTGAAGTCCATCATGCCATCAGTGGTAAAAAATAAAGAGGTCTATTGCAATATAATCCGTGATGTTCTCGTTAAACTGTGAACTTGATTGAACAGGGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAGGTAACCTCACTCTCTTAATTGTTAAGTTTGTAAAATATCTGTACCTGGCGAGAAGTAGCATACATCCATTGGAATAATCGAGTTCACACAAATTTCCCAAACACCACAGTTATAAAATAACATCATACCATACTTTTTTAACCATCTCAGGAGAAACGTGCATGATTTCATATGAAATGGAGAAGGGGAGCATAATGCCATATCTATTATTTAATTGTCTAAATCTGTCTTCTGCTTGTCATTGTTACCACCCTTTCTTCTTATAACTGGTATAATGAATGTGATATTATTTGTAGATGTGGATTTAATGACAGTGTATTCTAGTTGTGTTTACTCCTTGTGACAACTTTCTTTTTGATTCTCATGCAGGCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATGGTACGCCATTTGGAGATTATTTATTTTGACATTTTAATCTAAAAGTTCAATGTAGAAACCCTTCCTGTCTTATCAAAACAGATATCCTTTCTGGATAACTAATCCAAAAAGAAAAAATCTCTCTGTATTAATTATGTACTACTTCAATTTTCAATTTTCTCAAGTGATTTTGATTTTTTATGTGTACAACTGCTTTCTCCTTTACCCACTTTGTTATCTTTGAGAGGAAAATTATAACTGGATAGAGCACCACTGTTAGGATAATGTGGAAACAGGAAAGCAAAGTTGAGGAGAGGCCAAGTTGGTTACGTAGTCCTCACTTCAATAATTCAATTGATTGATGACTGATATGTGATGTCATTCTTCATATCCTCTCTTGCTAGGATCTGTTGTTTAGTGGTCATAGTTGCTTGTGTTTACCATTGCGGTTTGCTTGAACATGAGGTTTTGTGAAGTGTAAACTGCATTATGGACCTTAAGAAAGCATGTGAATCTAGTAATTTTTGTTAGTATCTTGCCTTAGTCACTTGCTAGTGAGATCTCTTTGTCCGATTTTGGCATGATGTACTCGATGTAGTAAGTAGTATATCACTCGCCTGGACAGTGCACAACATAAAGAAAGCATTTTCTTAGGGGGCATTTGGTATATAAATGGGACAGGGCTGATCCTATTACTTAGGATGGGATATTAGTGGGGTAATAGAGGCGGAAATGTATGTGTGACTAGTGTTTATATGTTGGATGACACGGCCAATAAATCAGTGAATTTAATTTTTATTTCTCAAATTCTCTATCCGAATTTATTGTTTTGTAAGTCTGTTGTCCACATTTTGATCTTTATATAATCGAAAATAGACAACAAAATTTTACCACATGTACTCAGTGAAACCAAAAGCTATCTGAATTGCATAATTTCAAGACACAACCAGAAATAGCAGAGCCTAACAAAAGCATTGGCGGTGGATAGATTAAGAAAACACAAAAACAATTAGCAGGAGATGGAAAATATCAGGAAAAATTGAAGAAGGAAAAAAGAAATTATCGTAAGGTAGAGTCTGAATGCTTCATTTGGCTGGTAAGGAGCGAGATTGAATATCAGTTTTCTTTCGTTGGAGAAGAAATGTAGTAGTTTAGTTGGGAAGTGTTTGATCAGTGCTGACTGTTGGGGCAAAGGAAGAAAAAAAGGAAGGAAGAAGAGAAGCTACCCGACGAGGGTCAAAGGAAGTCTGTGCTCTAGGGCCTCCAGGGTGGAGGGTCTTGAAATTGTTGTAGTGGATAGGAAGGCGAGGAGGAAGAAGAAGATGAAGACAAGAAAAAAAGAGGAACCTTGCCCTGCTAATTAGTTGTCATGATTGAATCAGCACCTTCACTGCAATTTCCCTTTGCCCAGTTGTTACCCTTCTCTGTTTATATGGGATGTCCATTCAGTCATTGTCTCACATATGGAAGGTAGATTGCAAGCCCACTCCCTTGCGATGAAACAACATCTGGATCTTTATAAAAAGAAGGAAGAAAATCTCAGATAGAATAATCCAATATGGTCTAGTTTTGAATGCTAACCGGGGCACACTTTTGTCTTGCCTAACCTGAGGCTGATCTGGTTCATGAAATGGCTAATGAGCCATTACTATTTTCATTATAATTTTGTTCCATGCATAGACATCTTAAACTGCTTTTCATCACTTTGTAGTATAACAATGAATGACAACTATCTATGGACAAGCTAATTACTTTAATCTGCATAGATCCGATAATCATTTGTTGTAAGCCACAAAGGTTACTGTTTAACATTTTCAATTTTTCATATACCTATCTAATGTGCTTTTTAATTTAATTTTCGTTAATTTGCATACATCACAGAAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTCCGCTCACCCTTTTCGTCAAAGGTTAGTTGTCTCCCTATTTGTTATCGTAGCATCATAGAGTAGTTTATAATATTTATCTATTTATTTTTTCTTAAAAAAGTACACTCATGAGATACCTCTTGAAAGAAAAAGATCAGTCGTGAGCAAAGAGAAATACTTTTTGTAATACGACTTAACTTTGTTCTTTCTCAAAAGAAAAAAAGGAATGGATAACTCTATTGACTTCTTCTTCTCATGCACAACTCCAGCAGCCTTTGGATAAACCAGTTCCAAACGCCACATTACAAGTCACGGGCGCTGTTGGTTGGCGC</genome_strand>
        <mrna_strand>TCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAG.................................................................................................................................................................................................................................................................................................................................................................................GCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTCCGCTCACCCTTTTCGTCAAAG...................................................................................................................................................................................................................................CAGCCTTTGGATAAACCAGTTCCAAACGCCACATTACAAGTCACGGGCGCTGTTGGTTGGCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E250441" ref_strand="+" ref_description="SGN-E250441 [cLEG-18-A15]">
      <seq>tttcttctacatgagaattagcaatgtctatattgtgattgtagttagcaccaatgcaaatgtcgcatgtgcattcaagtttgtggttgaggctgttgcactattcaaatcttattttggtggttcttttgacgaagatgccattcgtaataactttgtcctaatttacgagcttttggatgaaataatggactttggttaccctcaaaatctttcacctgaaatcttgaaactctatattactcaggaaggggtccgctcacccttttcgtcaaagcagcctttggataaaccagttccaaacgccacattacaagtcacgggcgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="63040" stop="59656"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62740" g_stop="62650" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62649" i_stop="62281" i_length="369">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62280" g_stop="62190" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="182" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62189" i_stop="60330" i_length="1860">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.588" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60329" g_stop="60235" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="277" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60234" i_stop="60008" i_length="227">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60007" g_stop="59956" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="329" r_length="52" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E250441" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>329</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E250441" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62740" e_stop="62650"/>
          <exon e_start="62280" e_stop="62190"/>
          <exon e_start="60329" e_stop="60235"/>
          <exon e_start="60007" e_stop="59956"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAGGTAACCTCACTCTCTTAATTGTTAAGTTTGTAAAATATCTGTACCTGGCGAGAAGTAGCATACATCCATTGGAATAATCGAGTTCACACAAATTTCCCAAACACCACAGTTATAAAATAACATCATACCATACTTTTTTAACCATCTCAGGAGAAACGTGCATGATTTCATATGAAATGGAGAAGGGGAGCATAATGCCATATCTATTATTTAATTGTCTAAATCTGTCTTCTGCTTGTCATTGTTACCACCCTTTCTTCTTATAACTGGTATAATGAATGTGATATTATTTGTAGATGTGGATTTAATGACAGTGTATTCTAGTTGTGTTTACTCCTTGTGACAACTTTCTTTTTGATTCTCATGCAGGCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATGGTACGCCATTTGGAGATTATTTATTTTGACATTTTAATCTAAAAGTTCAATGTAGAAACCCTTCCTGTCTTATCAAAACAGATATCCTTTCTGGATAACTAATCCAAAAAGAAAAAATCTCTCTGTATTAATTATGTACTACTTCAATTTTCAATTTTCTCAAGTGATTTTGATTTTTTATGTGTACAACTGCTTTCTCCTTTACCCACTTTGTTATCTTTGAGAGGAAAATTATAACTGGATAGAGCACCACTGTTAGGATAATGTGGAAACAGGAAAGCAAAGTTGAGGAGAGGCCAAGTTGGTTACGTAGTCCTCACTTCAATAATTCAATTGATTGATGACTGATATGTGATGTCATTCTTCATATCCTCTCTTGCTAGGATCTGTTGTTTAGTGGTCATAGTTGCTTGTGTTTACCATTGCGGTTTGCTTGAACATGAGGTTTTGTGAAGTGTAAACTGCATTATGGACCTTAAGAAAGCATGTGAATCTAGTAATTTTTGTTAGTATCTTGCCTTAGTCACTTGCTAGTGAGATCTCTTTGTCCGATTTTGGCATGATGTACTCGATGTAGTAAGTAGTATATCACTCGCCTGGACAGTGCACAACATAAAGAAAGCATTTTCTTAGGGGGCATTTGGTATATAAATGGGACAGGGCTGATCCTATTACTTAGGATGGGATATTAGTGGGGTAATAGAGGCGGAAATGTATGTGTGACTAGTGTTTATATGTTGGATGACACGGCCAATAAATCAGTGAATTTAATTTTTATTTCTCAAATTCTCTATCCGAATTTATTGTTTTGTAAGTCTGTTGTCCACATTTTGATCTTTATATAATCGAAAATAGACAACAAAATTTTACCACATGTACTCAGTGAAACCAAAAGCTATCTGAATTGCATAATTTCAAGACACAACCAGAAATAGCAGAGCCTAACAAAAGCATTGGCGGTGGATAGATTAAGAAAACACAAAAACAATTAGCAGGAGATGGAAAATATCAGGAAAAATTGAAGAAGGAAAAAAGAAATTATCGTAAGGTAGAGTCTGAATGCTTCATTTGGCTGGTAAGGAGCGAGATTGAATATCAGTTTTCTTTCGTTGGAGAAGAAATGTAGTAGTTTAGTTGGGAAGTGTTTGATCAGTGCTGACTGTTGGGGCAAAGGAAGAAAAAAAGGAAGGAAGAAGAGAAGCTACCCGACGAGGGTCAAAGGAAGTCTGTGCTCTAGGGCCTCCAGGGTGGAGGGTCTTGAAATTGTTGTAGTGGATAGGAAGGCGAGGAGGAAGAAGAAGATGAAGACAAGAAAAAAAGAGGAACCTTGCCCTGCTAATTAGTTGTCATGATTGAATCAGCACCTTCACTGCAATTTCCCTTTGCCCAGTTGTTACCCTTCTCTGTTTATATGGGATGTCCATTCAGTCATTGTCTCACATATGGAAGGTAGATTGCAAGCCCACTCCCTTGCGATGAAACAACATCTGGATCTTTATAAAAAGAAGGAAGAAAATCTCAGATAGAATAATCCAATATGGTCTAGTTTTGAATGCTAACCGGGGCACACTTTTGTCTTGCCTAACCTGAGGCTGATCTGGTTCATGAAATGGCTAATGAGCCATTACTATTTTCATTATAATTTTGTTCCATGCATAGACATCTTAAACTGCTTTTCATCACTTTGTAGTATAACAATGAATGACAACTATCTATGGACAAGCTAATTACTTTAATCTGCATAGATCCGATAATCATTTGTTGTAAGCCACAAAGGTTACTGTTTAACATTTTCAATTTTTCATATACCTATCTAATGTGCTTTTTAATTTAATTTTCGTTAATTTGCATACATCACAGAAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTCCGCTCACCCTTTTCGTCAAAGGTTAGTTGTCTCCCTATTTGTTATCGTAGCATCATAGAGTAGTTTATAATATTTATCTATTTATTTTTTCTTAAAAAAGTACACTCATGAGATACCTCTTGAAAGAAAAAGATCAGTCGTGAGCAAAGAGAAATACTTTTTGTAATACGACTTAACTTTGTTCTTTCTCAAAAGAAAAAAAGGAATGGATAACTCTATTGACTTCTTCTTCTCATGCACAACTCCAGCAGCCTTTGGATAAACCAGTTCCAAACGCCACATTACAAGTCACGGGCGCTG</genome_strand>
        <mrna_strand>TTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAG.................................................................................................................................................................................................................................................................................................................................................................................GCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTCCGCTCACCCTTTTCGTCAAAG...................................................................................................................................................................................................................................CAGCCTTTGGATAAACCAGTTCCAAACGCCACATTACAAGTCACGGGCGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E253021" ref_strand="+" ref_description="SGN-E253021 [cLEG-25-L12]">
      <seq>tcgaatcatttagatctgacttgatcgatgtttctagatccatttcggtgttgcagccatgcctgtggcagcttcagctgtttacttcctcaatctccgtggcgatgtcctcatcaatcgtctataccgtgacgacgtcgggggtaatatggtagatgcctttcggatgcatataatgcagacaaaagaactcgggacatgtcctgtcaggcagattggaggttgctctttcttctacatgagaattagcaatgtctatattgtgattgtagttagcaccaatgcaaatgtcgcatgtgcattcaagtttgtggttgaggctgttgcactattcaaatcttattttggtggttcttttgacgaagatgccattcgtaataactttgtcctaatttacgagcttttggatgaaataatggactttggttaccctcaaaatctttcacctgaaatcttgaaactctatattactcaggaaggggtccgctcacccttttcgtcaaagcagcctttggataaaccagttccaaacgccacattacaagtcacgggcgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="66350" stop="59658"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66050" g_stop="65910" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="141" r_length="141" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65909" i_stop="62828" i_length="3082">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62827" g_stop="62650" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="319" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62649" i_stop="62281" i_length="369">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62280" g_stop="62190" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="410" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62189" i_stop="60330" i_length="1860">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.588" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60329" g_stop="60235" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="505" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="60234" i_stop="60008" i_length="227">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="60007" g_stop="59958" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="555" r_length="50" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E253021" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E253021" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66050" e_stop="65910"/>
          <exon e_start="62827" e_stop="62650"/>
          <exon e_start="62280" e_stop="62190"/>
          <exon e_start="60329" e_stop="60235"/>
          <exon e_start="60007" e_stop="59958"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGGGTATGTTTCCACTCTCTTCGCACGGATCAGTGTACGTAGAATTGTTATTTGATTTTCGGAACCAGTTGCTGATTTCTGTATATAATTCTGGAAACTTTTGTCTGAACATCGAGATGGATCTACTTGTATATATTTAGATGCGTATGTTTGGATCTTTTTTTTAAATATGTTTTTGCTGTATTGGAACGCATCACCACATGAATCTATGTGTTGCAATTGCCTGTAACATCAATTTCCATAATCCAAATAGTGATCTCTTCGATATCACTCTCATCCAGATCCTCAACAAAAGATTGGCTGTTTGCTGCAAGTAATAGACTTCCAATATTTCTTCGTAAATAGTGCTAGAAGAAAAGAGTAGGCACTTGCCCTTGAATCATAGCTATCTAGCTGATATCACTGATTGGTAATGACATCAAACTTCCACTCTGGACTCCCAATCTTGAATGCTATTGAAAAACTGGCCACCTGCAGTTGAGTTTGTTGTAGTGTTGTAGCTGTAACCCAGTATGTAATGACTTTCTAGTTCCCCATGCATACAACATGAACTTGATTAACTAATGCATTCTTTGCTCCCATGTCCAGATTCTCTCCTATAATTTCTATAGCATTAGCAGCAGTAACATGTAGAAGTTTGGGGTAGGATCCATAAGTATCTCCATCAGGGATTGGGTCGGCATAGAGCCAACTCTATTCCATATTCAGCTGAAATTATTATAGGCATCTAAATTGGAAGCGGAACATTCATTATAACAATGAAAACCCAATGAGTGCTTCCATTCAAAGAATTTCTCCCTTTCCCCGAATAAGTTACGCCAGTTGCGAGGATCAACCATAGAAATCATGTGCTTTTTGCAATTCTCATACATAAGGAACAATTAAATCGAAGAATAGAGAAATCAAATGAAGATGAAAGCAAAGATGAAGGAAAATAAAGAATTGGAGAGAAAACATAGATTTGATTCTTCATTCAGCATGCTGTAATATGGGATTACAAGTGAAAATAAAGAGTGTAGGAGAGTAAATCTAGATCGCGTGGCTCTTGCCCAATAGTGAAATTGCCTTTAACAGCTGCAACACAATTGACCTTTGAACAAACCCAGTGGTGACATCACCATCCTAACAAACTGTACAAGAGGGCTAAAGAAATAAAACAAATATTTGGGACTAAGCTGTAAATAGATGGAAACACCGGTAAGCTCATGGTGCCATTTGCTAACGTATGCATATATATATATATGTAAGTATGTGATGACTGGGAGGGTGGAATGCAAGGCAATGGATGTGACTACACTGTGCTGCCTTAACTCATTCTCATCTTGGAAAGCTGTTGCAATATATGTTTTTGGAAGCTCGACATGTAGTTTATCTTATGCAATTAAATCAGGCTTCTTGTTTGCCCTCTTTAGAGGAATTAAAGTAGTTCTACGAGGTCATGCTCCAGGTACTTTGAGAAGACGAGGGAGAAAAAAATAGGGAGTATATTAAGCATTAACCTAGTTTAAAGCATATTTTGTAATGACTTTACTTGTTGCGTGATGCTGGTGTTTAATTGAGTAAGCTTGAGATCTGGAGTTTCACACTTGAATGTGTTTTCTCAGCTGGAAAGAGGGAGATCTTTGTCCAACAAGAAAGGATGTAATGAGATCCTTTGATCCAATGCAAAAATTCTAGCTTTTGTTTTTATTGGATGTGGGTTAAAAAGTCTGATGCAACATCTGATCCATTAAATTAATTCTTGAATCCTCCTATTGTCATAAATAATTGTATTTGAAAGCAAGTGTGAGTTCTAGTGGCTGAAAGTATTATTCTTGTATATCTTTCCTGAAAATAGTTTTTATGGCGGAGAAATCTACTGGAGCCAATCCTTTGGGTCAACTGCAAGTCTACAACCTTTGTAACGTGGGGATGATGAACTTACCACTTTTCCTTTCTCCACTTAAATACTAGATTTAGTTACCTTGAAGCAGGGTCGAACTTGTGACCTAAGACACAATTCGCTCAAGCTTTGTCAGTTGAACTAATCGCTAGGGCTGTTTCCAGAAAATATAAACTTATTATATTATGAATTTGCCGCGGAAAGCATCTCCCATTGTTAGTTGGACTTGCAATTCCTGACCAAGTAGATATTGGAAGTTGACTAATAAAATCCTCTATTAATAGCATGAGATGTGATTGAGTTTCTAGAGCATTTTCCCCCTTTAGTATCTTTTCACCCCCCTTGAAAATAGAGGGGATGAAACTGATCAAGTGGGAATAATTCTCTCGTCTTTGGGTCCCTTGGTGAGACAATAGAAACTAAAAGCAGAAGCTTATCAAAATGCTCCTCCAGTGACATACATTCTTATGCTTGTTTGCTTTAAATGGGTGTTACAATTCCCATTGCTTTCTTCATCTTTGCAGATTTTCCTCTTATCTCCAAAAATAACCTTTCAATTTCACTTTTTAATATTGATATAATTAAATCAAACTGAAGAAAATCATTCCTCTGCAGACAGTATTATCAATTAATTTTAGTTTTTTCAAATTCTTATTTTGTTTTTGTTTTACAATAAACTTTAATTCTCTTTTGGATTCCTAATTTAGCTTTGATGCTATTCTCTGCATTTTTCCTCCTTGTGTCTTAAGTTTGACCTTTTTTGCCTTGGATTGATAAAACAAACTGTCTATTTTTCTCTTAATCTGTCAACGGTCACATGTTTAGCAGGTATTTGGTAATTTGAATACAAACATGAAACGTGTCACTTGTAAGAAATGTGCCTCTTATTCTGCTATCAAGAAATTTTGACCAATGTTCAGCTTGGATTTGTCAACTTTTTGGCTTTGACATCCGTTGCAATTGCCATTTGTAGGTTTTATAAATAACATCTATTTGCCCATTTTTCTCATTACCATTTTAATTACTGATAAACATGTTTGTTCAGTAAACCAATGAGATCATGTCTTCAGCTTCTGTACTTTCTTCTTTTTTTCTAATAAGATGTGTGCTGAAGTCCATCATGCCATCAGTGGTAAAAAATAAAGAGGTCTATTGCAATATAATCCGTGATGTTCTCGTTAAACTGTGAACTTGATTGAACAGGGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAGGTAACCTCACTCTCTTAATTGTTAAGTTTGTAAAATATCTGTACCTGGCGAGAAGTAGCATACATCCATTGGAATAATCGAGTTCACACAAATTTCCCAAACACCACAGTTATAAAATAACATCATACCATACTTTTTTAACCATCTCAGGAGAAACGTGCATGATTTCATATGAAATGGAGAAGGGGAGCATAATGCCATATCTATTATTTAATTGTCTAAATCTGTCTTCTGCTTGTCATTGTTACCACCCTTTCTTCTTATAACTGGTATAATGAATGTGATATTATTTGTAGATGTGGATTTAATGACAGTGTATTCTAGTTGTGTTTACTCCTTGTGACAACTTTCTTTTTGATTCTCATGCAGGCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATGGTACGCCATTTGGAGATTATTTATTTTGACATTTTAATCTAAAAGTTCAATGTAGAAACCCTTCCTGTCTTATCAAAACAGATATCCTTTCTGGATAACTAATCCAAAAAGAAAAAATCTCTCTGTATTAATTATGTACTACTTCAATTTTCAATTTTCTCAAGTGATTTTGATTTTTTATGTGTACAACTGCTTTCTCCTTTACCCACTTTGTTATCTTTGAGAGGAAAATTATAACTGGATAGAGCACCACTGTTAGGATAATGTGGAAACAGGAAAGCAAAGTTGAGGAGAGGCCAAGTTGGTTACGTAGTCCTCACTTCAATAATTCAATTGATTGATGACTGATATGTGATGTCATTCTTCATATCCTCTCTTGCTAGGATCTGTTGTTTAGTGGTCATAGTTGCTTGTGTTTACCATTGCGGTTTGCTTGAACATGAGGTTTTGTGAAGTGTAAACTGCATTATGGACCTTAAGAAAGCATGTGAATCTAGTAATTTTTGTTAGTATCTTGCCTTAGTCACTTGCTAGTGAGATCTCTTTGTCCGATTTTGGCATGATGTACTCGATGTAGTAAGTAGTATATCACTCGCCTGGACAGTGCACAACATAAAGAAAGCATTTTCTTAGGGGGCATTTGGTATATAAATGGGACAGGGCTGATCCTATTACTTAGGATGGGATATTAGTGGGGTAATAGAGGCGGAAATGTATGTGTGACTAGTGTTTATATGTTGGATGACACGGCCAATAAATCAGTGAATTTAATTTTTATTTCTCAAATTCTCTATCCGAATTTATTGTTTTGTAAGTCTGTTGTCCACATTTTGATCTTTATATAATCGAAAATAGACAACAAAATTTTACCACATGTACTCAGTGAAACCAAAAGCTATCTGAATTGCATAATTTCAAGACACAACCAGAAATAGCAGAGCCTAACAAAAGCATTGGCGGTGGATAGATTAAGAAAACACAAAAACAATTAGCAGGAGATGGAAAATATCAGGAAAAATTGAAGAAGGAAAAAAGAAATTATCGTAAGGTAGAGTCTGAATGCTTCATTTGGCTGGTAAGGAGCGAGATTGAATATCAGTTTTCTTTCGTTGGAGAAGAAATGTAGTAGTTTAGTTGGGAAGTGTTTGATCAGTGCTGACTGTTGGGGCAAAGGAAGAAAAAAAGGAAGGAAGAAGAGAAGCTACCCGACGAGGGTCAAAGGAAGTCTGTGCTCTAGGGCCTCCAGGGTGGAGGGTCTTGAAATTGTTGTAGTGGATAGGAAGGCGAGGAGGAAGAAGAAGATGAAGACAAGAAAAAAAGAGGAACCTTGCCCTGCTAATTAGTTGTCATGATTGAATCAGCACCTTCACTGCAATTTCCCTTTGCCCAGTTGTTACCCTTCTCTGTTTATATGGGATGTCCATTCAGTCATTGTCTCACATATGGAAGGTAGATTGCAAGCCCACTCCCTTGCGATGAAACAACATCTGGATCTTTATAAAAAGAAGGAAGAAAATCTCAGATAGAATAATCCAATATGGTCTAGTTTTGAATGCTAACCGGGGCACACTTTTGTCTTGCCTAACCTGAGGCTGATCTGGTTCATGAAATGGCTAATGAGCCATTACTATTTTCATTATAATTTTGTTCCATGCATAGACATCTTAAACTGCTTTTCATCACTTTGTAGTATAACAATGAATGACAACTATCTATGGACAAGCTAATTACTTTAATCTGCATAGATCCGATAATCATTTGTTGTAAGCCACAAAGGTTACTGTTTAACATTTTCAATTTTTCATATACCTATCTAATGTGCTTTTTAATTTAATTTTCGTTAATTTGCATACATCACAGAAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTCCGCTCACCCTTTTCGTCAAAGGTTAGTTGTCTCCCTATTTGTTATCGTAGCATCATAGAGTAGTTTATAATATTTATCTATTTATTTTTTCTTAAAAAAGTACACTCATGAGATACCTCTTGAAAGAAAAAGATCAGTCGTGAGCAAAGAGAAATACTTTTTGTAATACGACTTAACTTTGTTCTTTCTCAAAAGAAAAAAAGGAATGGATAACTCTATTGACTTCTTCTTCTCATGCACAACTCCAGCAGCCTTTGGATAAACCAGTTCCAAACGCCACATTACAAGTCACGGGCGC</genome_strand>
        <mrna_strand>TCGAATCATTTAGATCTGACTTGATCGATGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAG.................................................................................................................................................................................................................................................................................................................................................................................GCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTCCGCTCACCCTTTTCGTCAAAG...................................................................................................................................................................................................................................CAGCCTTTGGATAAACCAGTTCCAAACGCCACATTACAAGTCACGGGCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E440935" ref_strand="+" ref_description="SGN-E440935 [cSTA-28-F23]">
      <seq>aagctgtccgcaactggcgacatttctctcccatctacaacaaatgtaactgttcttcctacatttttcatttccttataattgaaaaacgtttcgaatcatttagatctgacttgatcgaagtttctagatccattttggtgttgcagccatgcctgtggcagcttcagctgtttacttcctcaatctccgtggcgatgtcctcatcaaccgcctctaccgtgatgacgtcgggggtaatatggtagatgccttccggatgcatataatgcagacaaaagaacttgggacatgtcctgtcaggcagattggaggttgctctttcttctacatgagaattagcaatgtctatattgtgattgtagttagcaccaatgcaaatgtcgcatgtgcattcaagtttgtggttgaggctgttgcactattcaaatcttattttggtggttcttttgacgaagatgccattcgtaataactttgtcctaatttacgagcttttggatgaaataatggacttcggttaccctcaaaatctttcacctgaaatcttgaaactctatattactcaggaaggggttcgctcacccttttcgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="66444" stop="59939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66144" g_stop="65910" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="234" r_length="234" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65909" i_stop="62828" i_length="3082">
            <donor d_prob="0.996" d_score="0.92"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62827" g_stop="62650" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="412" r_length="178" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62649" i_stop="62281" i_length="369">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62280" g_stop="62190" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="503" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62189" i_stop="60330" i_length="1860">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.588" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60329" g_stop="60239" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="504" r_stop="594" r_length="91" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E440935" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>595</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E440935" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66144" e_stop="65910"/>
          <exon e_start="62827" e_stop="62650"/>
          <exon e_start="62280" e_stop="62190"/>
          <exon e_start="60329" e_stop="60239"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTGTCCCCAACTGGCGACATTTCTCTCCCATCTACGACAAATCTAACTGTTCTTCCCTACGTTTTTCATTTCATTATTATTGAAGAACCTTTCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGGGTATGTTTCCACTCTCTTCGCACGGATCAGTGTACGTAGAATTGTTATTTGATTTTCGGAACCAGTTGCTGATTTCTGTATATAATTCTGGAAACTTTTGTCTGAACATCGAGATGGATCTACTTGTATATATTTAGATGCGTATGTTTGGATCTTTTTTTTAAATATGTTTTTGCTGTATTGGAACGCATCACCACATGAATCTATGTGTTGCAATTGCCTGTAACATCAATTTCCATAATCCAAATAGTGATCTCTTCGATATCACTCTCATCCAGATCCTCAACAAAAGATTGGCTGTTTGCTGCAAGTAATAGACTTCCAATATTTCTTCGTAAATAGTGCTAGAAGAAAAGAGTAGGCACTTGCCCTTGAATCATAGCTATCTAGCTGATATCACTGATTGGTAATGACATCAAACTTCCACTCTGGACTCCCAATCTTGAATGCTATTGAAAAACTGGCCACCTGCAGTTGAGTTTGTTGTAGTGTTGTAGCTGTAACCCAGTATGTAATGACTTTCTAGTTCCCCATGCATACAACATGAACTTGATTAACTAATGCATTCTTTGCTCCCATGTCCAGATTCTCTCCTATAATTTCTATAGCATTAGCAGCAGTAACATGTAGAAGTTTGGGGTAGGATCCATAAGTATCTCCATCAGGGATTGGGTCGGCATAGAGCCAACTCTATTCCATATTCAGCTGAAATTATTATAGGCATCTAAATTGGAAGCGGAACATTCATTATAACAATGAAAACCCAATGAGTGCTTCCATTCAAAGAATTTCTCCCTTTCCCCGAATAAGTTACGCCAGTTGCGAGGATCAACCATAGAAATCATGTGCTTTTTGCAATTCTCATACATAAGGAACAATTAAATCGAAGAATAGAGAAATCAAATGAAGATGAAAGCAAAGATGAAGGAAAATAAAGAATTGGAGAGAAAACATAGATTTGATTCTTCATTCAGCATGCTGTAATATGGGATTACAAGTGAAAATAAAGAGTGTAGGAGAGTAAATCTAGATCGCGTGGCTCTTGCCCAATAGTGAAATTGCCTTTAACAGCTGCAACACAATTGACCTTTGAACAAACCCAGTGGTGACATCACCATCCTAACAAACTGTACAAGAGGGCTAAAGAAATAAAACAAATATTTGGGACTAAGCTGTAAATAGATGGAAACACCGGTAAGCTCATGGTGCCATTTGCTAACGTATGCATATATATATATATGTAAGTATGTGATGACTGGGAGGGTGGAATGCAAGGCAATGGATGTGACTACACTGTGCTGCCTTAACTCATTCTCATCTTGGAAAGCTGTTGCAATATATGTTTTTGGAAGCTCGACATGTAGTTTATCTTATGCAATTAAATCAGGCTTCTTGTTTGCCCTCTTTAGAGGAATTAAAGTAGTTCTACGAGGTCATGCTCCAGGTACTTTGAGAAGACGAGGGAGAAAAAAATAGGGAGTATATTAAGCATTAACCTAGTTTAAAGCATATTTTGTAATGACTTTACTTGTTGCGTGATGCTGGTGTTTAATTGAGTAAGCTTGAGATCTGGAGTTTCACACTTGAATGTGTTTTCTCAGCTGGAAAGAGGGAGATCTTTGTCCAACAAGAAAGGATGTAATGAGATCCTTTGATCCAATGCAAAAATTCTAGCTTTTGTTTTTATTGGATGTGGGTTAAAAAGTCTGATGCAACATCTGATCCATTAAATTAATTCTTGAATCCTCCTATTGTCATAAATAATTGTATTTGAAAGCAAGTGTGAGTTCTAGTGGCTGAAAGTATTATTCTTGTATATCTTTCCTGAAAATAGTTTTTATGGCGGAGAAATCTACTGGAGCCAATCCTTTGGGTCAACTGCAAGTCTACAACCTTTGTAACGTGGGGATGATGAACTTACCACTTTTCCTTTCTCCACTTAAATACTAGATTTAGTTACCTTGAAGCAGGGTCGAACTTGTGACCTAAGACACAATTCGCTCAAGCTTTGTCAGTTGAACTAATCGCTAGGGCTGTTTCCAGAAAATATAAACTTATTATATTATGAATTTGCCGCGGAAAGCATCTCCCATTGTTAGTTGGACTTGCAATTCCTGACCAAGTAGATATTGGAAGTTGACTAATAAAATCCTCTATTAATAGCATGAGATGTGATTGAGTTTCTAGAGCATTTTCCCCCTTTAGTATCTTTTCACCCCCCTTGAAAATAGAGGGGATGAAACTGATCAAGTGGGAATAATTCTCTCGTCTTTGGGTCCCTTGGTGAGACAATAGAAACTAAAAGCAGAAGCTTATCAAAATGCTCCTCCAGTGACATACATTCTTATGCTTGTTTGCTTTAAATGGGTGTTACAATTCCCATTGCTTTCTTCATCTTTGCAGATTTTCCTCTTATCTCCAAAAATAACCTTTCAATTTCACTTTTTAATATTGATATAATTAAATCAAACTGAAGAAAATCATTCCTCTGCAGACAGTATTATCAATTAATTTTAGTTTTTTCAAATTCTTATTTTGTTTTTGTTTTACAATAAACTTTAATTCTCTTTTGGATTCCTAATTTAGCTTTGATGCTATTCTCTGCATTTTTCCTCCTTGTGTCTTAAGTTTGACCTTTTTTGCCTTGGATTGATAAAACAAACTGTCTATTTTTCTCTTAATCTGTCAACGGTCACATGTTTAGCAGGTATTTGGTAATTTGAATACAAACATGAAACGTGTCACTTGTAAGAAATGTGCCTCTTATTCTGCTATCAAGAAATTTTGACCAATGTTCAGCTTGGATTTGTCAACTTTTTGGCTTTGACATCCGTTGCAATTGCCATTTGTAGGTTTTATAAATAACATCTATTTGCCCATTTTTCTCATTACCATTTTAATTACTGATAAACATGTTTGTTCAGTAAACCAATGAGATCATGTCTTCAGCTTCTGTACTTTCTTCTTTTTTTCTAATAAGATGTGTGCTGAAGTCCATCATGCCATCAGTGGTAAAAAATAAAGAGGTCTATTGCAATATAATCCGTGATGTTCTCGTTAAACTGTGAACTTGATTGAACAGGGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAGGTAACCTCACTCTCTTAATTGTTAAGTTTGTAAAATATCTGTACCTGGCGAGAAGTAGCATACATCCATTGGAATAATCGAGTTCACACAAATTTCCCAAACACCACAGTTATAAAATAACATCATACCATACTTTTTTAACCATCTCAGGAGAAACGTGCATGATTTCATATGAAATGGAGAAGGGGAGCATAATGCCATATCTATTATTTAATTGTCTAAATCTGTCTTCTGCTTGTCATTGTTACCACCCTTTCTTCTTATAACTGGTATAATGAATGTGATATTATTTGTAGATGTGGATTTAATGACAGTGTATTCTAGTTGTGTTTACTCCTTGTGACAACTTTCTTTTTGATTCTCATGCAGGCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATGGTACGCCATTTGGAGATTATTTATTTTGACATTTTAATCTAAAAGTTCAATGTAGAAACCCTTCCTGTCTTATCAAAACAGATATCCTTTCTGGATAACTAATCCAAAAAGAAAAAATCTCTCTGTATTAATTATGTACTACTTCAATTTTCAATTTTCTCAAGTGATTTTGATTTTTTATGTGTACAACTGCTTTCTCCTTTACCCACTTTGTTATCTTTGAGAGGAAAATTATAACTGGATAGAGCACCACTGTTAGGATAATGTGGAAACAGGAAAGCAAAGTTGAGGAGAGGCCAAGTTGGTTACGTAGTCCTCACTTCAATAATTCAATTGATTGATGACTGATATGTGATGTCATTCTTCATATCCTCTCTTGCTAGGATCTGTTGTTTAGTGGTCATAGTTGCTTGTGTTTACCATTGCGGTTTGCTTGAACATGAGGTTTTGTGAAGTGTAAACTGCATTATGGACCTTAAGAAAGCATGTGAATCTAGTAATTTTTGTTAGTATCTTGCCTTAGTCACTTGCTAGTGAGATCTCTTTGTCCGATTTTGGCATGATGTACTCGATGTAGTAAGTAGTATATCACTCGCCTGGACAGTGCACAACATAAAGAAAGCATTTTCTTAGGGGGCATTTGGTATATAAATGGGACAGGGCTGATCCTATTACTTAGGATGGGATATTAGTGGGGTAATAGAGGCGGAAATGTATGTGTGACTAGTGTTTATATGTTGGATGACACGGCCAATAAATCAGTGAATTTAATTTTTATTTCTCAAATTCTCTATCCGAATTTATTGTTTTGTAAGTCTGTTGTCCACATTTTGATCTTTATATAATCGAAAATAGACAACAAAATTTTACCACATGTACTCAGTGAAACCAAAAGCTATCTGAATTGCATAATTTCAAGACACAACCAGAAATAGCAGAGCCTAACAAAAGCATTGGCGGTGGATAGATTAAGAAAACACAAAAACAATTAGCAGGAGATGGAAAATATCAGGAAAAATTGAAGAAGGAAAAAAGAAATTATCGTAAGGTAGAGTCTGAATGCTTCATTTGGCTGGTAAGGAGCGAGATTGAATATCAGTTTTCTTTCGTTGGAGAAGAAATGTAGTAGTTTAGTTGGGAAGTGTTTGATCAGTGCTGACTGTTGGGGCAAAGGAAGAAAAAAAGGAAGGAAGAAGAGAAGCTACCCGACGAGGGTCAAAGGAAGTCTGTGCTCTAGGGCCTCCAGGGTGGAGGGTCTTGAAATTGTTGTAGTGGATAGGAAGGCGAGGAGGAAGAAGAAGATGAAGACAAGAAAAAAAGAGGAACCTTGCCCTGCTAATTAGTTGTCATGATTGAATCAGCACCTTCACTGCAATTTCCCTTTGCCCAGTTGTTACCCTTCTCTGTTTATATGGGATGTCCATTCAGTCATTGTCTCACATATGGAAGGTAGATTGCAAGCCCACTCCCTTGCGATGAAACAACATCTGGATCTTTATAAAAAGAAGGAAGAAAATCTCAGATAGAATAATCCAATATGGTCTAGTTTTGAATGCTAACCGGGGCACACTTTTGTCTTGCCTAACCTGAGGCTGATCTGGTTCATGAAATGGCTAATGAGCCATTACTATTTTCATTATAATTTTGTTCCATGCATAGACATCTTAAACTGCTTTTCATCACTTTGTAGTATAACAATGAATGACAACTATCTATGGACAAGCTAATTACTTTAATCTGCATAGATCCGATAATCATTTGTTGTAAGCCACAAAGGTTACTGTTTAACATTTTCAATTTTTCATATACCTATCTAATGTGCTTTTTAATTTAATTTTCGTTAATTTGCATACATCACAGAAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTCCGCTCACCCTTTTCGTC</genome_strand>
        <mrna_strand>AAGCTGTCCGCAACTGGCGACATTTCTCTCCCATCTACAACAAATGTAACTGTTCTT-CCTACATTTTTCATTTCCTTATAATTGAAAAACGTTTCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTTGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAACCGCCTCTACCGTGATGACGTCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTAATATGGTAGATGCCTTCCGGATGCATATAATGCAGACAAAAGAACTTGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAG.................................................................................................................................................................................................................................................................................................................................................................................GCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAATGGACTTCGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTTCGCTCACCCTTTTCGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E301652" ref_strand="+" ref_description="SGN-E301652 [cLEW-23-I12]">
      <seq>gaatttaagctgtccccaactggcgacatttctctcccatctacgacaaatctaactgttcttccctacgtttttcatttcattattattgaagaacctttcgaatcatttagatctgacttgatcgaagtttctagatccatttcggtgttgcagccatgcctgtggcagcttcagctgtttacttcctcaatctccgtggcgatgtcctcatcaatcgtctataccgtgacgacgtcgggggtaatatggtagatgcctttcggatgcatataatgcagacaaaagaactcgggacatgtcctgtcaggcagattggaggttgctctttcttctacatgagaattagcaatgtctatattgtgattgtagttagcaccaatgcaaatgtcgcatgtgcattcaagtttgtggttgaggctgttgcactattcaaatcttattttggtggttcttttgacgaagatgccattcgtaataactttgtcctaatttacgagcttttggatgaaataatggactttggttaccctcaaaatctttcacctgaaatcttgaaactctatattactcaggaaggggtccgctcacccttttcgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="66450" stop="59940"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66150" g_stop="65910" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="241" r_length="241" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65909" i_stop="62828" i_length="3082">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62827" g_stop="62650" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="419" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62649" i_stop="62281" i_length="369">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62280" g_stop="62190" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="510" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62189" i_stop="60330" i_length="1860">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.588" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60329" g_stop="60240" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="511" r_stop="600" r_length="90" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E301652" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>600</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E301652" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66150" e_stop="65910"/>
          <exon e_start="62827" e_stop="62650"/>
          <exon e_start="62280" e_stop="62190"/>
          <exon e_start="60329" e_stop="60240"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTTAAGCTGTCCCCAACTGGCGACATTTCTCTCCCATCTACGACAAATCTAACTGTTCTTCCCTACGTTTTTCATTTCATTATTATTGAAGAACCTTTCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGGGTATGTTTCCACTCTCTTCGCACGGATCAGTGTACGTAGAATTGTTATTTGATTTTCGGAACCAGTTGCTGATTTCTGTATATAATTCTGGAAACTTTTGTCTGAACATCGAGATGGATCTACTTGTATATATTTAGATGCGTATGTTTGGATCTTTTTTTTAAATATGTTTTTGCTGTATTGGAACGCATCACCACATGAATCTATGTGTTGCAATTGCCTGTAACATCAATTTCCATAATCCAAATAGTGATCTCTTCGATATCACTCTCATCCAGATCCTCAACAAAAGATTGGCTGTTTGCTGCAAGTAATAGACTTCCAATATTTCTTCGTAAATAGTGCTAGAAGAAAAGAGTAGGCACTTGCCCTTGAATCATAGCTATCTAGCTGATATCACTGATTGGTAATGACATCAAACTTCCACTCTGGACTCCCAATCTTGAATGCTATTGAAAAACTGGCCACCTGCAGTTGAGTTTGTTGTAGTGTTGTAGCTGTAACCCAGTATGTAATGACTTTCTAGTTCCCCATGCATACAACATGAACTTGATTAACTAATGCATTCTTTGCTCCCATGTCCAGATTCTCTCCTATAATTTCTATAGCATTAGCAGCAGTAACATGTAGAAGTTTGGGGTAGGATCCATAAGTATCTCCATCAGGGATTGGGTCGGCATAGAGCCAACTCTATTCCATATTCAGCTGAAATTATTATAGGCATCTAAATTGGAAGCGGAACATTCATTATAACAATGAAAACCCAATGAGTGCTTCCATTCAAAGAATTTCTCCCTTTCCCCGAATAAGTTACGCCAGTTGCGAGGATCAACCATAGAAATCATGTGCTTTTTGCAATTCTCATACATAAGGAACAATTAAATCGAAGAATAGAGAAATCAAATGAAGATGAAAGCAAAGATGAAGGAAAATAAAGAATTGGAGAGAAAACATAGATTTGATTCTTCATTCAGCATGCTGTAATATGGGATTACAAGTGAAAATAAAGAGTGTAGGAGAGTAAATCTAGATCGCGTGGCTCTTGCCCAATAGTGAAATTGCCTTTAACAGCTGCAACACAATTGACCTTTGAACAAACCCAGTGGTGACATCACCATCCTAACAAACTGTACAAGAGGGCTAAAGAAATAAAACAAATATTTGGGACTAAGCTGTAAATAGATGGAAACACCGGTAAGCTCATGGTGCCATTTGCTAACGTATGCATATATATATATATGTAAGTATGTGATGACTGGGAGGGTGGAATGCAAGGCAATGGATGTGACTACACTGTGCTGCCTTAACTCATTCTCATCTTGGAAAGCTGTTGCAATATATGTTTTTGGAAGCTCGACATGTAGTTTATCTTATGCAATTAAATCAGGCTTCTTGTTTGCCCTCTTTAGAGGAATTAAAGTAGTTCTACGAGGTCATGCTCCAGGTACTTTGAGAAGACGAGGGAGAAAAAAATAGGGAGTATATTAAGCATTAACCTAGTTTAAAGCATATTTTGTAATGACTTTACTTGTTGCGTGATGCTGGTGTTTAATTGAGTAAGCTTGAGATCTGGAGTTTCACACTTGAATGTGTTTTCTCAGCTGGAAAGAGGGAGATCTTTGTCCAACAAGAAAGGATGTAATGAGATCCTTTGATCCAATGCAAAAATTCTAGCTTTTGTTTTTATTGGATGTGGGTTAAAAAGTCTGATGCAACATCTGATCCATTAAATTAATTCTTGAATCCTCCTATTGTCATAAATAATTGTATTTGAAAGCAAGTGTGAGTTCTAGTGGCTGAAAGTATTATTCTTGTATATCTTTCCTGAAAATAGTTTTTATGGCGGAGAAATCTACTGGAGCCAATCCTTTGGGTCAACTGCAAGTCTACAACCTTTGTAACGTGGGGATGATGAACTTACCACTTTTCCTTTCTCCACTTAAATACTAGATTTAGTTACCTTGAAGCAGGGTCGAACTTGTGACCTAAGACACAATTCGCTCAAGCTTTGTCAGTTGAACTAATCGCTAGGGCTGTTTCCAGAAAATATAAACTTATTATATTATGAATTTGCCGCGGAAAGCATCTCCCATTGTTAGTTGGACTTGCAATTCCTGACCAAGTAGATATTGGAAGTTGACTAATAAAATCCTCTATTAATAGCATGAGATGTGATTGAGTTTCTAGAGCATTTTCCCCCTTTAGTATCTTTTCACCCCCCTTGAAAATAGAGGGGATGAAACTGATCAAGTGGGAATAATTCTCTCGTCTTTGGGTCCCTTGGTGAGACAATAGAAACTAAAAGCAGAAGCTTATCAAAATGCTCCTCCAGTGACATACATTCTTATGCTTGTTTGCTTTAAATGGGTGTTACAATTCCCATTGCTTTCTTCATCTTTGCAGATTTTCCTCTTATCTCCAAAAATAACCTTTCAATTTCACTTTTTAATATTGATATAATTAAATCAAACTGAAGAAAATCATTCCTCTGCAGACAGTATTATCAATTAATTTTAGTTTTTTCAAATTCTTATTTTGTTTTTGTTTTACAATAAACTTTAATTCTCTTTTGGATTCCTAATTTAGCTTTGATGCTATTCTCTGCATTTTTCCTCCTTGTGTCTTAAGTTTGACCTTTTTTGCCTTGGATTGATAAAACAAACTGTCTATTTTTCTCTTAATCTGTCAACGGTCACATGTTTAGCAGGTATTTGGTAATTTGAATACAAACATGAAACGTGTCACTTGTAAGAAATGTGCCTCTTATTCTGCTATCAAGAAATTTTGACCAATGTTCAGCTTGGATTTGTCAACTTTTTGGCTTTGACATCCGTTGCAATTGCCATTTGTAGGTTTTATAAATAACATCTATTTGCCCATTTTTCTCATTACCATTTTAATTACTGATAAACATGTTTGTTCAGTAAACCAATGAGATCATGTCTTCAGCTTCTGTACTTTCTTCTTTTTTTCTAATAAGATGTGTGCTGAAGTCCATCATGCCATCAGTGGTAAAAAATAAAGAGGTCTATTGCAATATAATCCGTGATGTTCTCGTTAAACTGTGAACTTGATTGAACAGGGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAGGTAACCTCACTCTCTTAATTGTTAAGTTTGTAAAATATCTGTACCTGGCGAGAAGTAGCATACATCCATTGGAATAATCGAGTTCACACAAATTTCCCAAACACCACAGTTATAAAATAACATCATACCATACTTTTTTAACCATCTCAGGAGAAACGTGCATGATTTCATATGAAATGGAGAAGGGGAGCATAATGCCATATCTATTATTTAATTGTCTAAATCTGTCTTCTGCTTGTCATTGTTACCACCCTTTCTTCTTATAACTGGTATAATGAATGTGATATTATTTGTAGATGTGGATTTAATGACAGTGTATTCTAGTTGTGTTTACTCCTTGTGACAACTTTCTTTTTGATTCTCATGCAGGCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATGGTACGCCATTTGGAGATTATTTATTTTGACATTTTAATCTAAAAGTTCAATGTAGAAACCCTTCCTGTCTTATCAAAACAGATATCCTTTCTGGATAACTAATCCAAAAAGAAAAAATCTCTCTGTATTAATTATGTACTACTTCAATTTTCAATTTTCTCAAGTGATTTTGATTTTTTATGTGTACAACTGCTTTCTCCTTTACCCACTTTGTTATCTTTGAGAGGAAAATTATAACTGGATAGAGCACCACTGTTAGGATAATGTGGAAACAGGAAAGCAAAGTTGAGGAGAGGCCAAGTTGGTTACGTAGTCCTCACTTCAATAATTCAATTGATTGATGACTGATATGTGATGTCATTCTTCATATCCTCTCTTGCTAGGATCTGTTGTTTAGTGGTCATAGTTGCTTGTGTTTACCATTGCGGTTTGCTTGAACATGAGGTTTTGTGAAGTGTAAACTGCATTATGGACCTTAAGAAAGCATGTGAATCTAGTAATTTTTGTTAGTATCTTGCCTTAGTCACTTGCTAGTGAGATCTCTTTGTCCGATTTTGGCATGATGTACTCGATGTAGTAAGTAGTATATCACTCGCCTGGACAGTGCACAACATAAAGAAAGCATTTTCTTAGGGGGCATTTGGTATATAAATGGGACAGGGCTGATCCTATTACTTAGGATGGGATATTAGTGGGGTAATAGAGGCGGAAATGTATGTGTGACTAGTGTTTATATGTTGGATGACACGGCCAATAAATCAGTGAATTTAATTTTTATTTCTCAAATTCTCTATCCGAATTTATTGTTTTGTAAGTCTGTTGTCCACATTTTGATCTTTATATAATCGAAAATAGACAACAAAATTTTACCACATGTACTCAGTGAAACCAAAAGCTATCTGAATTGCATAATTTCAAGACACAACCAGAAATAGCAGAGCCTAACAAAAGCATTGGCGGTGGATAGATTAAGAAAACACAAAAACAATTAGCAGGAGATGGAAAATATCAGGAAAAATTGAAGAAGGAAAAAAGAAATTATCGTAAGGTAGAGTCTGAATGCTTCATTTGGCTGGTAAGGAGCGAGATTGAATATCAGTTTTCTTTCGTTGGAGAAGAAATGTAGTAGTTTAGTTGGGAAGTGTTTGATCAGTGCTGACTGTTGGGGCAAAGGAAGAAAAAAAGGAAGGAAGAAGAGAAGCTACCCGACGAGGGTCAAAGGAAGTCTGTGCTCTAGGGCCTCCAGGGTGGAGGGTCTTGAAATTGTTGTAGTGGATAGGAAGGCGAGGAGGAAGAAGAAGATGAAGACAAGAAAAAAAGAGGAACCTTGCCCTGCTAATTAGTTGTCATGATTGAATCAGCACCTTCACTGCAATTTCCCTTTGCCCAGTTGTTACCCTTCTCTGTTTATATGGGATGTCCATTCAGTCATTGTCTCACATATGGAAGGTAGATTGCAAGCCCACTCCCTTGCGATGAAACAACATCTGGATCTTTATAAAAAGAAGGAAGAAAATCTCAGATAGAATAATCCAATATGGTCTAGTTTTGAATGCTAACCGGGGCACACTTTTGTCTTGCCTAACCTGAGGCTGATCTGGTTCATGAAATGGCTAATGAGCCATTACTATTTTCATTATAATTTTGTTCCATGCATAGACATCTTAAACTGCTTTTCATCACTTTGTAGTATAACAATGAATGACAACTATCTATGGACAAGCTAATTACTTTAATCTGCATAGATCCGATAATCATTTGTTGTAAGCCACAAAGGTTACTGTTTAACATTTTCAATTTTTCATATACCTATCTAATGTGCTTTTTAATTTAATTTTCGTTAATTTGCATACATCACAGAAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTCCGCTCACCCTTTTCGT</genome_strand>
        <mrna_strand>GAATTTAAGCTGTCCCCAACTGGCGACATTTCTCTCCCATCTACGACAAATCTAACTGTTCTTCCCTACGTTTTTCATTTCATTATTATTGAAGAACCTTTCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAG.................................................................................................................................................................................................................................................................................................................................................................................GCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTCCGCTCACCCTTTTCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E313772" ref_strand="+" ref_description="SGN-E313772 [cTOA-17-B24]">
      <seq>aactggcgacatttctctcccatctacggaaatctgactgttcttccctacgtttttcatttcattattattgaagaacctttcgaatcatttagatctgacttgatcgaagtttctagatccatttcggtgttgcagccatgcctgtggcagcttcagctgtttacttcctcaatctccgtggcgatgtcctcatcaatcgtctataccgtgacgacgtcgggggtaatatggtagatgcctttcggatgcatataatgcagacaaaagaactcgggacatgtcctgtcaggcagattggaggttgctctttcttctacatgagaattagcaatgtctatattgtgattgtagttagcaccaatgcaaatgtcgcatgtgcattcaagtttgtggttgaggctgttgcactattcaaatcttattttggtggttcttttgacgaagatgccattcgtaataactttgtcctaatttacgagcttttggatgaaataatggactttggttaccctcaaaatctttcacctgaaatcttgaaactctatattactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="66433" stop="59967"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66133" g_stop="65910" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="223" r_length="223" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65909" i_stop="62828" i_length="3082">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62827" g_stop="62650" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="401" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62649" i_stop="62281" i_length="369">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62280" g_stop="62190" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="402" r_stop="492" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62189" i_stop="60330" i_length="1860">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.588" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60329" g_stop="60267" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="493" r_stop="555" r_length="63" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E313772" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E313772" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66133" e_stop="65910"/>
          <exon e_start="62827" e_stop="62650"/>
          <exon e_start="62280" e_stop="62190"/>
          <exon e_start="60329" e_stop="60267"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTGGCGACATTTCTCTCCCATCTACGACAAATCTAACTGTTCTTCCCTACGTTTTTCATTTCATTATTATTGAAGAACCTTTCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGGGTATGTTTCCACTCTCTTCGCACGGATCAGTGTACGTAGAATTGTTATTTGATTTTCGGAACCAGTTGCTGATTTCTGTATATAATTCTGGAAACTTTTGTCTGAACATCGAGATGGATCTACTTGTATATATTTAGATGCGTATGTTTGGATCTTTTTTTTAAATATGTTTTTGCTGTATTGGAACGCATCACCACATGAATCTATGTGTTGCAATTGCCTGTAACATCAATTTCCATAATCCAAATAGTGATCTCTTCGATATCACTCTCATCCAGATCCTCAACAAAAGATTGGCTGTTTGCTGCAAGTAATAGACTTCCAATATTTCTTCGTAAATAGTGCTAGAAGAAAAGAGTAGGCACTTGCCCTTGAATCATAGCTATCTAGCTGATATCACTGATTGGTAATGACATCAAACTTCCACTCTGGACTCCCAATCTTGAATGCTATTGAAAAACTGGCCACCTGCAGTTGAGTTTGTTGTAGTGTTGTAGCTGTAACCCAGTATGTAATGACTTTCTAGTTCCCCATGCATACAACATGAACTTGATTAACTAATGCATTCTTTGCTCCCATGTCCAGATTCTCTCCTATAATTTCTATAGCATTAGCAGCAGTAACATGTAGAAGTTTGGGGTAGGATCCATAAGTATCTCCATCAGGGATTGGGTCGGCATAGAGCCAACTCTATTCCATATTCAGCTGAAATTATTATAGGCATCTAAATTGGAAGCGGAACATTCATTATAACAATGAAAACCCAATGAGTGCTTCCATTCAAAGAATTTCTCCCTTTCCCCGAATAAGTTACGCCAGTTGCGAGGATCAACCATAGAAATCATGTGCTTTTTGCAATTCTCATACATAAGGAACAATTAAATCGAAGAATAGAGAAATCAAATGAAGATGAAAGCAAAGATGAAGGAAAATAAAGAATTGGAGAGAAAACATAGATTTGATTCTTCATTCAGCATGCTGTAATATGGGATTACAAGTGAAAATAAAGAGTGTAGGAGAGTAAATCTAGATCGCGTGGCTCTTGCCCAATAGTGAAATTGCCTTTAACAGCTGCAACACAATTGACCTTTGAACAAACCCAGTGGTGACATCACCATCCTAACAAACTGTACAAGAGGGCTAAAGAAATAAAACAAATATTTGGGACTAAGCTGTAAATAGATGGAAACACCGGTAAGCTCATGGTGCCATTTGCTAACGTATGCATATATATATATATGTAAGTATGTGATGACTGGGAGGGTGGAATGCAAGGCAATGGATGTGACTACACTGTGCTGCCTTAACTCATTCTCATCTTGGAAAGCTGTTGCAATATATGTTTTTGGAAGCTCGACATGTAGTTTATCTTATGCAATTAAATCAGGCTTCTTGTTTGCCCTCTTTAGAGGAATTAAAGTAGTTCTACGAGGTCATGCTCCAGGTACTTTGAGAAGACGAGGGAGAAAAAAATAGGGAGTATATTAAGCATTAACCTAGTTTAAAGCATATTTTGTAATGACTTTACTTGTTGCGTGATGCTGGTGTTTAATTGAGTAAGCTTGAGATCTGGAGTTTCACACTTGAATGTGTTTTCTCAGCTGGAAAGAGGGAGATCTTTGTCCAACAAGAAAGGATGTAATGAGATCCTTTGATCCAATGCAAAAATTCTAGCTTTTGTTTTTATTGGATGTGGGTTAAAAAGTCTGATGCAACATCTGATCCATTAAATTAATTCTTGAATCCTCCTATTGTCATAAATAATTGTATTTGAAAGCAAGTGTGAGTTCTAGTGGCTGAAAGTATTATTCTTGTATATCTTTCCTGAAAATAGTTTTTATGGCGGAGAAATCTACTGGAGCCAATCCTTTGGGTCAACTGCAAGTCTACAACCTTTGTAACGTGGGGATGATGAACTTACCACTTTTCCTTTCTCCACTTAAATACTAGATTTAGTTACCTTGAAGCAGGGTCGAACTTGTGACCTAAGACACAATTCGCTCAAGCTTTGTCAGTTGAACTAATCGCTAGGGCTGTTTCCAGAAAATATAAACTTATTATATTATGAATTTGCCGCGGAAAGCATCTCCCATTGTTAGTTGGACTTGCAATTCCTGACCAAGTAGATATTGGAAGTTGACTAATAAAATCCTCTATTAATAGCATGAGATGTGATTGAGTTTCTAGAGCATTTTCCCCCTTTAGTATCTTTTCACCCCCCTTGAAAATAGAGGGGATGAAACTGATCAAGTGGGAATAATTCTCTCGTCTTTGGGTCCCTTGGTGAGACAATAGAAACTAAAAGCAGAAGCTTATCAAAATGCTCCTCCAGTGACATACATTCTTATGCTTGTTTGCTTTAAATGGGTGTTACAATTCCCATTGCTTTCTTCATCTTTGCAGATTTTCCTCTTATCTCCAAAAATAACCTTTCAATTTCACTTTTTAATATTGATATAATTAAATCAAACTGAAGAAAATCATTCCTCTGCAGACAGTATTATCAATTAATTTTAGTTTTTTCAAATTCTTATTTTGTTTTTGTTTTACAATAAACTTTAATTCTCTTTTGGATTCCTAATTTAGCTTTGATGCTATTCTCTGCATTTTTCCTCCTTGTGTCTTAAGTTTGACCTTTTTTGCCTTGGATTGATAAAACAAACTGTCTATTTTTCTCTTAATCTGTCAACGGTCACATGTTTAGCAGGTATTTGGTAATTTGAATACAAACATGAAACGTGTCACTTGTAAGAAATGTGCCTCTTATTCTGCTATCAAGAAATTTTGACCAATGTTCAGCTTGGATTTGTCAACTTTTTGGCTTTGACATCCGTTGCAATTGCCATTTGTAGGTTTTATAAATAACATCTATTTGCCCATTTTTCTCATTACCATTTTAATTACTGATAAACATGTTTGTTCAGTAAACCAATGAGATCATGTCTTCAGCTTCTGTACTTTCTTCTTTTTTTCTAATAAGATGTGTGCTGAAGTCCATCATGCCATCAGTGGTAAAAAATAAAGAGGTCTATTGCAATATAATCCGTGATGTTCTCGTTAAACTGTGAACTTGATTGAACAGGGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAGGTAACCTCACTCTCTTAATTGTTAAGTTTGTAAAATATCTGTACCTGGCGAGAAGTAGCATACATCCATTGGAATAATCGAGTTCACACAAATTTCCCAAACACCACAGTTATAAAATAACATCATACCATACTTTTTTAACCATCTCAGGAGAAACGTGCATGATTTCATATGAAATGGAGAAGGGGAGCATAATGCCATATCTATTATTTAATTGTCTAAATCTGTCTTCTGCTTGTCATTGTTACCACCCTTTCTTCTTATAACTGGTATAATGAATGTGATATTATTTGTAGATGTGGATTTAATGACAGTGTATTCTAGTTGTGTTTACTCCTTGTGACAACTTTCTTTTTGATTCTCATGCAGGCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATGGTACGCCATTTGGAGATTATTTATTTTGACATTTTAATCTAAAAGTTCAATGTAGAAACCCTTCCTGTCTTATCAAAACAGATATCCTTTCTGGATAACTAATCCAAAAAGAAAAAATCTCTCTGTATTAATTATGTACTACTTCAATTTTCAATTTTCTCAAGTGATTTTGATTTTTTATGTGTACAACTGCTTTCTCCTTTACCCACTTTGTTATCTTTGAGAGGAAAATTATAACTGGATAGAGCACCACTGTTAGGATAATGTGGAAACAGGAAAGCAAAGTTGAGGAGAGGCCAAGTTGGTTACGTAGTCCTCACTTCAATAATTCAATTGATTGATGACTGATATGTGATGTCATTCTTCATATCCTCTCTTGCTAGGATCTGTTGTTTAGTGGTCATAGTTGCTTGTGTTTACCATTGCGGTTTGCTTGAACATGAGGTTTTGTGAAGTGTAAACTGCATTATGGACCTTAAGAAAGCATGTGAATCTAGTAATTTTTGTTAGTATCTTGCCTTAGTCACTTGCTAGTGAGATCTCTTTGTCCGATTTTGGCATGATGTACTCGATGTAGTAAGTAGTATATCACTCGCCTGGACAGTGCACAACATAAAGAAAGCATTTTCTTAGGGGGCATTTGGTATATAAATGGGACAGGGCTGATCCTATTACTTAGGATGGGATATTAGTGGGGTAATAGAGGCGGAAATGTATGTGTGACTAGTGTTTATATGTTGGATGACACGGCCAATAAATCAGTGAATTTAATTTTTATTTCTCAAATTCTCTATCCGAATTTATTGTTTTGTAAGTCTGTTGTCCACATTTTGATCTTTATATAATCGAAAATAGACAACAAAATTTTACCACATGTACTCAGTGAAACCAAAAGCTATCTGAATTGCATAATTTCAAGACACAACCAGAAATAGCAGAGCCTAACAAAAGCATTGGCGGTGGATAGATTAAGAAAACACAAAAACAATTAGCAGGAGATGGAAAATATCAGGAAAAATTGAAGAAGGAAAAAAGAAATTATCGTAAGGTAGAGTCTGAATGCTTCATTTGGCTGGTAAGGAGCGAGATTGAATATCAGTTTTCTTTCGTTGGAGAAGAAATGTAGTAGTTTAGTTGGGAAGTGTTTGATCAGTGCTGACTGTTGGGGCAAAGGAAGAAAAAAAGGAAGGAAGAAGAGAAGCTACCCGACGAGGGTCAAAGGAAGTCTGTGCTCTAGGGCCTCCAGGGTGGAGGGTCTTGAAATTGTTGTAGTGGATAGGAAGGCGAGGAGGAAGAAGAAGATGAAGACAAGAAAAAAAGAGGAACCTTGCCCTGCTAATTAGTTGTCATGATTGAATCAGCACCTTCACTGCAATTTCCCTTTGCCCAGTTGTTACCCTTCTCTGTTTATATGGGATGTCCATTCAGTCATTGTCTCACATATGGAAGGTAGATTGCAAGCCCACTCCCTTGCGATGAAACAACATCTGGATCTTTATAAAAAGAAGGAAGAAAATCTCAGATAGAATAATCCAATATGGTCTAGTTTTGAATGCTAACCGGGGCACACTTTTGTCTTGCCTAACCTGAGGCTGATCTGGTTCATGAAATGGCTAATGAGCCATTACTATTTTCATTATAATTTTGTTCCATGCATAGACATCTTAAACTGCTTTTCATCACTTTGTAGTATAACAATGAATGACAACTATCTATGGACAAGCTAATTACTTTAATCTGCATAGATCCGATAATCATTTGTTGTAAGCCACAAAGGTTACTGTTTAACATTTTCAATTTTTCATATACCTATCTAATGTGCTTTTTAATTTAATTTTCGTTAATTTGCATACATCACAGAAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTC</genome_strand>
        <mrna_strand>AACTGGCGACATTTCTCTCCCATCTACG-GAAATCTGACTGTTCTTCCCTACGTTTTTCATTTCATTATTATTGAAGAACCTTTCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAG.................................................................................................................................................................................................................................................................................................................................................................................GCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343041" ref_strand="+" ref_description="SGN-E343041 [cTOF-11-E12]">
      <seq>caactggcgacatttctctcccatctacgacaaatctaactgttcttccctacgtttttcatttcattattattgaagaacctttcgaatcatttagatctgacttgatcgaagtttctagatccatttcggtgttgcagccatgcctgtggcagcttcagctgtttacttcctcaatctccgtggcgatgtcctcatcaatcgtctataccgtgacgacgtcgggggtaatatggtagatgcctttcggatgcatataatgcagacaaaagaactcgggacatgtcctgtcaggcagattggaggttgctctttcttctacatgagaattagcaatgtctatattgtgattgtagttagcaccaatgcaaatgtcgcatgtgcattcaagtttgtggttgaggctgttgcactattcaaatcttattttggtggttcttttgacgaagatgccattcgtaataactttgtcctaatttacgagcttttggatggtacgccatttggagattatttattttgacattntaatctaaaagttcaatgtagaaacccttcctgtcttatcaaaacagatatcctttctggataactaatccaaaaagaaaaaatctctctgtattaaatatgtactacttcaattttcaattttctcaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="66434" stop="61727"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66134" g_stop="65910" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="225" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65909" i_stop="62828" i_length="3082">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62827" g_stop="62650" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="403" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62649" i_stop="62281" i_length="369">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62280" g_stop="62021" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="663" r_length="260" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E343041" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>663</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E343041" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66134" e_stop="65910"/>
          <exon e_start="62827" e_stop="62650"/>
          <exon e_start="62280" e_stop="62021"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACTGGCGACATTTCTCTCCCATCTACGACAAATCTAACTGTTCTTCCCTACGTTTTTCATTTCATTATTATTGAAGAACCTTTCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGGGTATGTTTCCACTCTCTTCGCACGGATCAGTGTACGTAGAATTGTTATTTGATTTTCGGAACCAGTTGCTGATTTCTGTATATAATTCTGGAAACTTTTGTCTGAACATCGAGATGGATCTACTTGTATATATTTAGATGCGTATGTTTGGATCTTTTTTTTAAATATGTTTTTGCTGTATTGGAACGCATCACCACATGAATCTATGTGTTGCAATTGCCTGTAACATCAATTTCCATAATCCAAATAGTGATCTCTTCGATATCACTCTCATCCAGATCCTCAACAAAAGATTGGCTGTTTGCTGCAAGTAATAGACTTCCAATATTTCTTCGTAAATAGTGCTAGAAGAAAAGAGTAGGCACTTGCCCTTGAATCATAGCTATCTAGCTGATATCACTGATTGGTAATGACATCAAACTTCCACTCTGGACTCCCAATCTTGAATGCTATTGAAAAACTGGCCACCTGCAGTTGAGTTTGTTGTAGTGTTGTAGCTGTAACCCAGTATGTAATGACTTTCTAGTTCCCCATGCATACAACATGAACTTGATTAACTAATGCATTCTTTGCTCCCATGTCCAGATTCTCTCCTATAATTTCTATAGCATTAGCAGCAGTAACATGTAGAAGTTTGGGGTAGGATCCATAAGTATCTCCATCAGGGATTGGGTCGGCATAGAGCCAACTCTATTCCATATTCAGCTGAAATTATTATAGGCATCTAAATTGGAAGCGGAACATTCATTATAACAATGAAAACCCAATGAGTGCTTCCATTCAAAGAATTTCTCCCTTTCCCCGAATAAGTTACGCCAGTTGCGAGGATCAACCATAGAAATCATGTGCTTTTTGCAATTCTCATACATAAGGAACAATTAAATCGAAGAATAGAGAAATCAAATGAAGATGAAAGCAAAGATGAAGGAAAATAAAGAATTGGAGAGAAAACATAGATTTGATTCTTCATTCAGCATGCTGTAATATGGGATTACAAGTGAAAATAAAGAGTGTAGGAGAGTAAATCTAGATCGCGTGGCTCTTGCCCAATAGTGAAATTGCCTTTAACAGCTGCAACACAATTGACCTTTGAACAAACCCAGTGGTGACATCACCATCCTAACAAACTGTACAAGAGGGCTAAAGAAATAAAACAAATATTTGGGACTAAGCTGTAAATAGATGGAAACACCGGTAAGCTCATGGTGCCATTTGCTAACGTATGCATATATATATATATGTAAGTATGTGATGACTGGGAGGGTGGAATGCAAGGCAATGGATGTGACTACACTGTGCTGCCTTAACTCATTCTCATCTTGGAAAGCTGTTGCAATATATGTTTTTGGAAGCTCGACATGTAGTTTATCTTATGCAATTAAATCAGGCTTCTTGTTTGCCCTCTTTAGAGGAATTAAAGTAGTTCTACGAGGTCATGCTCCAGGTACTTTGAGAAGACGAGGGAGAAAAAAATAGGGAGTATATTAAGCATTAACCTAGTTTAAAGCATATTTTGTAATGACTTTACTTGTTGCGTGATGCTGGTGTTTAATTGAGTAAGCTTGAGATCTGGAGTTTCACACTTGAATGTGTTTTCTCAGCTGGAAAGAGGGAGATCTTTGTCCAACAAGAAAGGATGTAATGAGATCCTTTGATCCAATGCAAAAATTCTAGCTTTTGTTTTTATTGGATGTGGGTTAAAAAGTCTGATGCAACATCTGATCCATTAAATTAATTCTTGAATCCTCCTATTGTCATAAATAATTGTATTTGAAAGCAAGTGTGAGTTCTAGTGGCTGAAAGTATTATTCTTGTATATCTTTCCTGAAAATAGTTTTTATGGCGGAGAAATCTACTGGAGCCAATCCTTTGGGTCAACTGCAAGTCTACAACCTTTGTAACGTGGGGATGATGAACTTACCACTTTTCCTTTCTCCACTTAAATACTAGATTTAGTTACCTTGAAGCAGGGTCGAACTTGTGACCTAAGACACAATTCGCTCAAGCTTTGTCAGTTGAACTAATCGCTAGGGCTGTTTCCAGAAAATATAAACTTATTATATTATGAATTTGCCGCGGAAAGCATCTCCCATTGTTAGTTGGACTTGCAATTCCTGACCAAGTAGATATTGGAAGTTGACTAATAAAATCCTCTATTAATAGCATGAGATGTGATTGAGTTTCTAGAGCATTTTCCCCCTTTAGTATCTTTTCACCCCCCTTGAAAATAGAGGGGATGAAACTGATCAAGTGGGAATAATTCTCTCGTCTTTGGGTCCCTTGGTGAGACAATAGAAACTAAAAGCAGAAGCTTATCAAAATGCTCCTCCAGTGACATACATTCTTATGCTTGTTTGCTTTAAATGGGTGTTACAATTCCCATTGCTTTCTTCATCTTTGCAGATTTTCCTCTTATCTCCAAAAATAACCTTTCAATTTCACTTTTTAATATTGATATAATTAAATCAAACTGAAGAAAATCATTCCTCTGCAGACAGTATTATCAATTAATTTTAGTTTTTTCAAATTCTTATTTTGTTTTTGTTTTACAATAAACTTTAATTCTCTTTTGGATTCCTAATTTAGCTTTGATGCTATTCTCTGCATTTTTCCTCCTTGTGTCTTAAGTTTGACCTTTTTTGCCTTGGATTGATAAAACAAACTGTCTATTTTTCTCTTAATCTGTCAACGGTCACATGTTTAGCAGGTATTTGGTAATTTGAATACAAACATGAAACGTGTCACTTGTAAGAAATGTGCCTCTTATTCTGCTATCAAGAAATTTTGACCAATGTTCAGCTTGGATTTGTCAACTTTTTGGCTTTGACATCCGTTGCAATTGCCATTTGTAGGTTTTATAAATAACATCTATTTGCCCATTTTTCTCATTACCATTTTAATTACTGATAAACATGTTTGTTCAGTAAACCAATGAGATCATGTCTTCAGCTTCTGTACTTTCTTCTTTTTTTCTAATAAGATGTGTGCTGAAGTCCATCATGCCATCAGTGGTAAAAAATAAAGAGGTCTATTGCAATATAATCCGTGATGTTCTCGTTAAACTGTGAACTTGATTGAACAGGGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAGGTAACCTCACTCTCTTAATTGTTAAGTTTGTAAAATATCTGTACCTGGCGAGAAGTAGCATACATCCATTGGAATAATCGAGTTCACACAAATTTCCCAAACACCACAGTTATAAAATAACATCATACCATACTTTTTTAACCATCTCAGGAGAAACGTGCATGATTTCATATGAAATGGAGAAGGGGAGCATAATGCCATATCTATTATTTAATTGTCTAAATCTGTCTTCTGCTTGTCATTGTTACCACCCTTTCTTCTTATAACTGGTATAATGAATGTGATATTATTTGTAGATGTGGATTTAATGACAGTGTATTCTAGTTGTGTTTACTCCTTGTGACAACTTTCTTTTTGATTCTCATGCAGGCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATGGTACGCCATTTGGAGATTATTTATTTTGACATTTTAATCTAAAAGTTCAATGTAGAAACCCTTCCTGTCTTATCAAAACAGATATCCTTTCTGGATAACTAATCCAAAAAGAAAAAATCTCTCTGTATTAATTATGTACTACTTCAATTTTCAATTTTCTCAAGTGATT</genome_strand>
        <mrna_strand>CAACTGGCGACATTTCTCTCCCATCTACGACAAATCTAACTGTTCTTCCCTACGTTTTTCATTTCATTATTATTGAAGAACCTTTCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAG.................................................................................................................................................................................................................................................................................................................................................................................GCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATGGTACGCCATTTGGAGATTATTTATTTTGACATTNTAATCTAAAAGTTCAATGTAGAAACCCTTCCTGTCTTATCAAAACAGATATCCTTTCTGGATAACTAATCCAAAAAGAAAAAATCTCTCTGTATTAAATATGTACTACTTCAATTTTCAATTTTCTCAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E203306" ref_strand="+" ref_description="SGN-E203306 [cLEB-3-F21]">
      <seq>tcggcacgagcccaactggcgacatttctctcccatctacgacaaatctaactgttcttccctacgtttttcatttcattattattgaagaacctttcgaatcatttagatctgacttgatcgaagtttctagatccatttcggtgttgcagccatgcctgtggcagcttcagctgtttacttcctcaatctccgtggcgatgtcctcatcaatcgtctataccgtgacgacgtcgggggtaatatggtcgatgcctttcggatgcatataatgcagacaaaagaactcgggacatgtcctgtcaggcagattggaggttgctctttcttctacatgagaattagcaatgtctatattgtgattgtagttagcaccaatgcaaatgtcgcatgtgcatttcaagcttgcggttgaggctgttgcactattcaaatcttattttggtggttcttttgacgaagatgccattcgtaataactttgtcctaatttacgagcttttggatgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="66436" stop="61890"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66145" g_stop="65910" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="237" r_length="237" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65909" i_stop="62828" i_length="3082">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62827" g_stop="62650" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="416" r_length="179" r_score="0.972"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62649" i_stop="62281" i_length="369">
            <donor d_prob="0.994" d_score="0.92"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62280" g_stop="62190" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="507" r_length="91" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E203306" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E203306" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66145" e_stop="65910"/>
          <exon e_start="62827" e_stop="62650"/>
          <exon e_start="62280" e_stop="62190"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGC-TGTCCCCAACTGGCGACATTTCTCTCCCATCTACGACAAATCTAACTGTTCTTCCCTACGTTTTTCATTTCATTATTATTGAAGAACCTTTCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGGGTATGTTTCCACTCTCTTCGCACGGATCAGTGTACGTAGAATTGTTATTTGATTTTCGGAACCAGTTGCTGATTTCTGTATATAATTCTGGAAACTTTTGTCTGAACATCGAGATGGATCTACTTGTATATATTTAGATGCGTATGTTTGGATCTTTTTTTTAAATATGTTTTTGCTGTATTGGAACGCATCACCACATGAATCTATGTGTTGCAATTGCCTGTAACATCAATTTCCATAATCCAAATAGTGATCTCTTCGATATCACTCTCATCCAGATCCTCAACAAAAGATTGGCTGTTTGCTGCAAGTAATAGACTTCCAATATTTCTTCGTAAATAGTGCTAGAAGAAAAGAGTAGGCACTTGCCCTTGAATCATAGCTATCTAGCTGATATCACTGATTGGTAATGACATCAAACTTCCACTCTGGACTCCCAATCTTGAATGCTATTGAAAAACTGGCCACCTGCAGTTGAGTTTGTTGTAGTGTTGTAGCTGTAACCCAGTATGTAATGACTTTCTAGTTCCCCATGCATACAACATGAACTTGATTAACTAATGCATTCTTTGCTCCCATGTCCAGATTCTCTCCTATAATTTCTATAGCATTAGCAGCAGTAACATGTAGAAGTTTGGGGTAGGATCCATAAGTATCTCCATCAGGGATTGGGTCGGCATAGAGCCAACTCTATTCCATATTCAGCTGAAATTATTATAGGCATCTAAATTGGAAGCGGAACATTCATTATAACAATGAAAACCCAATGAGTGCTTCCATTCAAAGAATTTCTCCCTTTCCCCGAATAAGTTACGCCAGTTGCGAGGATCAACCATAGAAATCATGTGCTTTTTGCAATTCTCATACATAAGGAACAATTAAATCGAAGAATAGAGAAATCAAATGAAGATGAAAGCAAAGATGAAGGAAAATAAAGAATTGGAGAGAAAACATAGATTTGATTCTTCATTCAGCATGCTGTAATATGGGATTACAAGTGAAAATAAAGAGTGTAGGAGAGTAAATCTAGATCGCGTGGCTCTTGCCCAATAGTGAAATTGCCTTTAACAGCTGCAACACAATTGACCTTTGAACAAACCCAGTGGTGACATCACCATCCTAACAAACTGTACAAGAGGGCTAAAGAAATAAAACAAATATTTGGGACTAAGCTGTAAATAGATGGAAACACCGGTAAGCTCATGGTGCCATTTGCTAACGTATGCATATATATATATATGTAAGTATGTGATGACTGGGAGGGTGGAATGCAAGGCAATGGATGTGACTACACTGTGCTGCCTTAACTCATTCTCATCTTGGAAAGCTGTTGCAATATATGTTTTTGGAAGCTCGACATGTAGTTTATCTTATGCAATTAAATCAGGCTTCTTGTTTGCCCTCTTTAGAGGAATTAAAGTAGTTCTACGAGGTCATGCTCCAGGTACTTTGAGAAGACGAGGGAGAAAAAAATAGGGAGTATATTAAGCATTAACCTAGTTTAAAGCATATTTTGTAATGACTTTACTTGTTGCGTGATGCTGGTGTTTAATTGAGTAAGCTTGAGATCTGGAGTTTCACACTTGAATGTGTTTTCTCAGCTGGAAAGAGGGAGATCTTTGTCCAACAAGAAAGGATGTAATGAGATCCTTTGATCCAATGCAAAAATTCTAGCTTTTGTTTTTATTGGATGTGGGTTAAAAAGTCTGATGCAACATCTGATCCATTAAATTAATTCTTGAATCCTCCTATTGTCATAAATAATTGTATTTGAAAGCAAGTGTGAGTTCTAGTGGCTGAAAGTATTATTCTTGTATATCTTTCCTGAAAATAGTTTTTATGGCGGAGAAATCTACTGGAGCCAATCCTTTGGGTCAACTGCAAGTCTACAACCTTTGTAACGTGGGGATGATGAACTTACCACTTTTCCTTTCTCCACTTAAATACTAGATTTAGTTACCTTGAAGCAGGGTCGAACTTGTGACCTAAGACACAATTCGCTCAAGCTTTGTCAGTTGAACTAATCGCTAGGGCTGTTTCCAGAAAATATAAACTTATTATATTATGAATTTGCCGCGGAAAGCATCTCCCATTGTTAGTTGGACTTGCAATTCCTGACCAAGTAGATATTGGAAGTTGACTAATAAAATCCTCTATTAATAGCATGAGATGTGATTGAGTTTCTAGAGCATTTTCCCCCTTTAGTATCTTTTCACCCCCCTTGAAAATAGAGGGGATGAAACTGATCAAGTGGGAATAATTCTCTCGTCTTTGGGTCCCTTGGTGAGACAATAGAAACTAAAAGCAGAAGCTTATCAAAATGCTCCTCCAGTGACATACATTCTTATGCTTGTTTGCTTTAAATGGGTGTTACAATTCCCATTGCTTTCTTCATCTTTGCAGATTTTCCTCTTATCTCCAAAAATAACCTTTCAATTTCACTTTTTAATATTGATATAATTAAATCAAACTGAAGAAAATCATTCCTCTGCAGACAGTATTATCAATTAATTTTAGTTTTTTCAAATTCTTATTTTGTTTTTGTTTTACAATAAACTTTAATTCTCTTTTGGATTCCTAATTTAGCTTTGATGCTATTCTCTGCATTTTTCCTCCTTGTGTCTTAAGTTTGACCTTTTTTGCCTTGGATTGATAAAACAAACTGTCTATTTTTCTCTTAATCTGTCAACGGTCACATGTTTAGCAGGTATTTGGTAATTTGAATACAAACATGAAACGTGTCACTTGTAAGAAATGTGCCTCTTATTCTGCTATCAAGAAATTTTGACCAATGTTCAGCTTGGATTTGTCAACTTTTTGGCTTTGACATCCGTTGCAATTGCCATTTGTAGGTTTTATAAATAACATCTATTTGCCCATTTTTCTCATTACCATTTTAATTACTGATAAACATGTTTGTTCAGTAAACCAATGAGATCATGTCTTCAGCTTCTGTACTTTCTTCTTTTTTTCTAATAAGATGTGTGCTGAAGTCCATCATGCCATCAGTGGTAAAAAATAAAGAGGTCTATTGCAATATAATCCGTGATGTTCTCGTTAAACTGTGAACTTGATTGAACAGGGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCA-TTCAAGTTTGTGGTTGAGGTAACCTCACTCTCTTAATTGTTAAGTTTGTAAAATATCTGTACCTGGCGAGAAGTAGCATACATCCATTGGAATAATCGAGTTCACACAAATTTCCCAAACACCACAGTTATAAAATAACATCATACCATACTTTTTTAACCATCTCAGGAGAAACGTGCATGATTTCATATGAAATGGAGAAGGGGAGCATAATGCCATATCTATTATTTAATTGTCTAAATCTGTCTTCTGCTTGTCATTGTTACCACCCTTTCTTCTTATAACTGGTATAATGAATGTGATATTATTTGTAGATGTGGATTTAATGACAGTGTATTCTAGTTGTGTTTACTCCTTGTGACAACTTTCTTTTTGATTCTCATGCAGGCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATG</genome_strand>
        <mrna_strand>TCGGCACGAGCCCAACTGGCGACATTTCTCTCCCATCTACGACAAATCTAACTGTTCTTCCCTACGTTTTTCATTTCATTATTATTGAAGAACCTTTCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTAATATGGTCGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTTCAAGCTTGCGGTTGAG.................................................................................................................................................................................................................................................................................................................................................................................GCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E469582" ref_strand="+" ref_description="SGN-E469582 [cSTB-12-J3]">
      <seq>ttgtcatttccttataattgaaaaacgtttcgaatcatttagatctgacttgatcgaagtttctagatccattttggtgttgcagccatgcctgtggcagcttcagctgtttacttcctcaatctccgtggcgatgtcctcatcaaccgcctctaccgtgatgacgtcgggggtaatatggtagatgccttccggatgcatataatgcagacaaaagaacttgggacatgtcctgtcaggcagattggagggtgctctttcttctacatgagaattagcaatgtctatattgtgattgtagttagcaccaatgcaaatgtcgcatgtgcattcaagttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="66379" stop="62359"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66079" g_stop="65910" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="0.941"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65909" i_stop="62828" i_length="3082">
            <donor d_prob="0.996" d_score="0.92"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62827" g_stop="62659" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="339" r_length="169" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E469582" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>339</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E469582" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66079" e_stop="65910"/>
          <exon e_start="62827" e_stop="62659"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCATTTCATTATTATTGAAGAACCTTTCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGGGTATGTTTCCACTCTCTTCGCACGGATCAGTGTACGTAGAATTGTTATTTGATTTTCGGAACCAGTTGCTGATTTCTGTATATAATTCTGGAAACTTTTGTCTGAACATCGAGATGGATCTACTTGTATATATTTAGATGCGTATGTTTGGATCTTTTTTTTAAATATGTTTTTGCTGTATTGGAACGCATCACCACATGAATCTATGTGTTGCAATTGCCTGTAACATCAATTTCCATAATCCAAATAGTGATCTCTTCGATATCACTCTCATCCAGATCCTCAACAAAAGATTGGCTGTTTGCTGCAAGTAATAGACTTCCAATATTTCTTCGTAAATAGTGCTAGAAGAAAAGAGTAGGCACTTGCCCTTGAATCATAGCTATCTAGCTGATATCACTGATTGGTAATGACATCAAACTTCCACTCTGGACTCCCAATCTTGAATGCTATTGAAAAACTGGCCACCTGCAGTTGAGTTTGTTGTAGTGTTGTAGCTGTAACCCAGTATGTAATGACTTTCTAGTTCCCCATGCATACAACATGAACTTGATTAACTAATGCATTCTTTGCTCCCATGTCCAGATTCTCTCCTATAATTTCTATAGCATTAGCAGCAGTAACATGTAGAAGTTTGGGGTAGGATCCATAAGTATCTCCATCAGGGATTGGGTCGGCATAGAGCCAACTCTATTCCATATTCAGCTGAAATTATTATAGGCATCTAAATTGGAAGCGGAACATTCATTATAACAATGAAAACCCAATGAGTGCTTCCATTCAAAGAATTTCTCCCTTTCCCCGAATAAGTTACGCCAGTTGCGAGGATCAACCATAGAAATCATGTGCTTTTTGCAATTCTCATACATAAGGAACAATTAAATCGAAGAATAGAGAAATCAAATGAAGATGAAAGCAAAGATGAAGGAAAATAAAGAATTGGAGAGAAAACATAGATTTGATTCTTCATTCAGCATGCTGTAATATGGGATTACAAGTGAAAATAAAGAGTGTAGGAGAGTAAATCTAGATCGCGTGGCTCTTGCCCAATAGTGAAATTGCCTTTAACAGCTGCAACACAATTGACCTTTGAACAAACCCAGTGGTGACATCACCATCCTAACAAACTGTACAAGAGGGCTAAAGAAATAAAACAAATATTTGGGACTAAGCTGTAAATAGATGGAAACACCGGTAAGCTCATGGTGCCATTTGCTAACGTATGCATATATATATATATGTAAGTATGTGATGACTGGGAGGGTGGAATGCAAGGCAATGGATGTGACTACACTGTGCTGCCTTAACTCATTCTCATCTTGGAAAGCTGTTGCAATATATGTTTTTGGAAGCTCGACATGTAGTTTATCTTATGCAATTAAATCAGGCTTCTTGTTTGCCCTCTTTAGAGGAATTAAAGTAGTTCTACGAGGTCATGCTCCAGGTACTTTGAGAAGACGAGGGAGAAAAAAATAGGGAGTATATTAAGCATTAACCTAGTTTAAAGCATATTTTGTAATGACTTTACTTGTTGCGTGATGCTGGTGTTTAATTGAGTAAGCTTGAGATCTGGAGTTTCACACTTGAATGTGTTTTCTCAGCTGGAAAGAGGGAGATCTTTGTCCAACAAGAAAGGATGTAATGAGATCCTTTGATCCAATGCAAAAATTCTAGCTTTTGTTTTTATTGGATGTGGGTTAAAAAGTCTGATGCAACATCTGATCCATTAAATTAATTCTTGAATCCTCCTATTGTCATAAATAATTGTATTTGAAAGCAAGTGTGAGTTCTAGTGGCTGAAAGTATTATTCTTGTATATCTTTCCTGAAAATAGTTTTTATGGCGGAGAAATCTACTGGAGCCAATCCTTTGGGTCAACTGCAAGTCTACAACCTTTGTAACGTGGGGATGATGAACTTACCACTTTTCCTTTCTCCACTTAAATACTAGATTTAGTTACCTTGAAGCAGGGTCGAACTTGTGACCTAAGACACAATTCGCTCAAGCTTTGTCAGTTGAACTAATCGCTAGGGCTGTTTCCAGAAAATATAAACTTATTATATTATGAATTTGCCGCGGAAAGCATCTCCCATTGTTAGTTGGACTTGCAATTCCTGACCAAGTAGATATTGGAAGTTGACTAATAAAATCCTCTATTAATAGCATGAGATGTGATTGAGTTTCTAGAGCATTTTCCCCCTTTAGTATCTTTTCACCCCCCTTGAAAATAGAGGGGATGAAACTGATCAAGTGGGAATAATTCTCTCGTCTTTGGGTCCCTTGGTGAGACAATAGAAACTAAAAGCAGAAGCTTATCAAAATGCTCCTCCAGTGACATACATTCTTATGCTTGTTTGCTTTAAATGGGTGTTACAATTCCCATTGCTTTCTTCATCTTTGCAGATTTTCCTCTTATCTCCAAAAATAACCTTTCAATTTCACTTTTTAATATTGATATAATTAAATCAAACTGAAGAAAATCATTCCTCTGCAGACAGTATTATCAATTAATTTTAGTTTTTTCAAATTCTTATTTTGTTTTTGTTTTACAATAAACTTTAATTCTCTTTTGGATTCCTAATTTAGCTTTGATGCTATTCTCTGCATTTTTCCTCCTTGTGTCTTAAGTTTGACCTTTTTTGCCTTGGATTGATAAAACAAACTGTCTATTTTTCTCTTAATCTGTCAACGGTCACATGTTTAGCAGGTATTTGGTAATTTGAATACAAACATGAAACGTGTCACTTGTAAGAAATGTGCCTCTTATTCTGCTATCAAGAAATTTTGACCAATGTTCAGCTTGGATTTGTCAACTTTTTGGCTTTGACATCCGTTGCAATTGCCATTTGTAGGTTTTATAAATAACATCTATTTGCCCATTTTTCTCATTACCATTTTAATTACTGATAAACATGTTTGTTCAGTAAACCAATGAGATCATGTCTTCAGCTTCTGTACTTTCTTCTTTTTTTCTAATAAGATGTGTGCTGAAGTCCATCATGCCATCAGTGGTAAAAAATAAAGAGGTCTATTGCAATATAATCCGTGATGTTCTCGTTAAACTGTGAACTTGATTGAACAGGGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTT</genome_strand>
        <mrna_strand>TTGTCATTTCCTTATAATTGAAAAACGTTTCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTTGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAACCGCCTCTACCGTGATGACGTCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTAATATGGTAGATGCCTTCCGGATGCATATAATGCAGACAAAAGAACTTGGGACATGTCCTGTCAGGCAGATTGGAGGGTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E208179" ref_strand="+" ref_description="SGN-E208179 [cLEC-37-K3]">
      <seq>tcccatctacgacaaatgtaactgttcttccctacgtttttcattccattattattgaagaacctttcgaatcatttagatctgacttgatcgaagtttctagatccatttcggtgttgcagccatgcctgtggcagcttcagctgtttacttcctcaatctgcgtggcgatgtcctcatcaatcgtctataccgtgacgacgtcgggggtaatatggcagatgcctttcggatgcatataatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="66416" stop="62491"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66116" g_stop="65910" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="207" r_length="207" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65909" i_stop="62828" i_length="3082">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62827" g_stop="62791" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="244" r_length="37" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E208179" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>244</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E208179" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66116" e_stop="65910"/>
          <exon e_start="62827" e_stop="62791"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCATCTACGACAAATCTAACTGTTCTTCCCTACGTTTTTCATTTCATTATTATTGAAGAACCTTTCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGGGTATGTTTCCACTCTCTTCGCACGGATCAGTGTACGTAGAATTGTTATTTGATTTTCGGAACCAGTTGCTGATTTCTGTATATAATTCTGGAAACTTTTGTCTGAACATCGAGATGGATCTACTTGTATATATTTAGATGCGTATGTTTGGATCTTTTTTTTAAATATGTTTTTGCTGTATTGGAACGCATCACCACATGAATCTATGTGTTGCAATTGCCTGTAACATCAATTTCCATAATCCAAATAGTGATCTCTTCGATATCACTCTCATCCAGATCCTCAACAAAAGATTGGCTGTTTGCTGCAAGTAATAGACTTCCAATATTTCTTCGTAAATAGTGCTAGAAGAAAAGAGTAGGCACTTGCCCTTGAATCATAGCTATCTAGCTGATATCACTGATTGGTAATGACATCAAACTTCCACTCTGGACTCCCAATCTTGAATGCTATTGAAAAACTGGCCACCTGCAGTTGAGTTTGTTGTAGTGTTGTAGCTGTAACCCAGTATGTAATGACTTTCTAGTTCCCCATGCATACAACATGAACTTGATTAACTAATGCATTCTTTGCTCCCATGTCCAGATTCTCTCCTATAATTTCTATAGCATTAGCAGCAGTAACATGTAGAAGTTTGGGGTAGGATCCATAAGTATCTCCATCAGGGATTGGGTCGGCATAGAGCCAACTCTATTCCATATTCAGCTGAAATTATTATAGGCATCTAAATTGGAAGCGGAACATTCATTATAACAATGAAAACCCAATGAGTGCTTCCATTCAAAGAATTTCTCCCTTTCCCCGAATAAGTTACGCCAGTTGCGAGGATCAACCATAGAAATCATGTGCTTTTTGCAATTCTCATACATAAGGAACAATTAAATCGAAGAATAGAGAAATCAAATGAAGATGAAAGCAAAGATGAAGGAAAATAAAGAATTGGAGAGAAAACATAGATTTGATTCTTCATTCAGCATGCTGTAATATGGGATTACAAGTGAAAATAAAGAGTGTAGGAGAGTAAATCTAGATCGCGTGGCTCTTGCCCAATAGTGAAATTGCCTTTAACAGCTGCAACACAATTGACCTTTGAACAAACCCAGTGGTGACATCACCATCCTAACAAACTGTACAAGAGGGCTAAAGAAATAAAACAAATATTTGGGACTAAGCTGTAAATAGATGGAAACACCGGTAAGCTCATGGTGCCATTTGCTAACGTATGCATATATATATATATGTAAGTATGTGATGACTGGGAGGGTGGAATGCAAGGCAATGGATGTGACTACACTGTGCTGCCTTAACTCATTCTCATCTTGGAAAGCTGTTGCAATATATGTTTTTGGAAGCTCGACATGTAGTTTATCTTATGCAATTAAATCAGGCTTCTTGTTTGCCCTCTTTAGAGGAATTAAAGTAGTTCTACGAGGTCATGCTCCAGGTACTTTGAGAAGACGAGGGAGAAAAAAATAGGGAGTATATTAAGCATTAACCTAGTTTAAAGCATATTTTGTAATGACTTTACTTGTTGCGTGATGCTGGTGTTTAATTGAGTAAGCTTGAGATCTGGAGTTTCACACTTGAATGTGTTTTCTCAGCTGGAAAGAGGGAGATCTTTGTCCAACAAGAAAGGATGTAATGAGATCCTTTGATCCAATGCAAAAATTCTAGCTTTTGTTTTTATTGGATGTGGGTTAAAAAGTCTGATGCAACATCTGATCCATTAAATTAATTCTTGAATCCTCCTATTGTCATAAATAATTGTATTTGAAAGCAAGTGTGAGTTCTAGTGGCTGAAAGTATTATTCTTGTATATCTTTCCTGAAAATAGTTTTTATGGCGGAGAAATCTACTGGAGCCAATCCTTTGGGTCAACTGCAAGTCTACAACCTTTGTAACGTGGGGATGATGAACTTACCACTTTTCCTTTCTCCACTTAAATACTAGATTTAGTTACCTTGAAGCAGGGTCGAACTTGTGACCTAAGACACAATTCGCTCAAGCTTTGTCAGTTGAACTAATCGCTAGGGCTGTTTCCAGAAAATATAAACTTATTATATTATGAATTTGCCGCGGAAAGCATCTCCCATTGTTAGTTGGACTTGCAATTCCTGACCAAGTAGATATTGGAAGTTGACTAATAAAATCCTCTATTAATAGCATGAGATGTGATTGAGTTTCTAGAGCATTTTCCCCCTTTAGTATCTTTTCACCCCCCTTGAAAATAGAGGGGATGAAACTGATCAAGTGGGAATAATTCTCTCGTCTTTGGGTCCCTTGGTGAGACAATAGAAACTAAAAGCAGAAGCTTATCAAAATGCTCCTCCAGTGACATACATTCTTATGCTTGTTTGCTTTAAATGGGTGTTACAATTCCCATTGCTTTCTTCATCTTTGCAGATTTTCCTCTTATCTCCAAAAATAACCTTTCAATTTCACTTTTTAATATTGATATAATTAAATCAAACTGAAGAAAATCATTCCTCTGCAGACAGTATTATCAATTAATTTTAGTTTTTTCAAATTCTTATTTTGTTTTTGTTTTACAATAAACTTTAATTCTCTTTTGGATTCCTAATTTAGCTTTGATGCTATTCTCTGCATTTTTCCTCCTTGTGTCTTAAGTTTGACCTTTTTTGCCTTGGATTGATAAAACAAACTGTCTATTTTTCTCTTAATCTGTCAACGGTCACATGTTTAGCAGGTATTTGGTAATTTGAATACAAACATGAAACGTGTCACTTGTAAGAAATGTGCCTCTTATTCTGCTATCAAGAAATTTTGACCAATGTTCAGCTTGGATTTGTCAACTTTTTGGCTTTGACATCCGTTGCAATTGCCATTTGTAGGTTTTATAAATAACATCTATTTGCCCATTTTTCTCATTACCATTTTAATTACTGATAAACATGTTTGTTCAGTAAACCAATGAGATCATGTCTTCAGCTTCTGTACTTTCTTCTTTTTTTCTAATAAGATGTGTGCTGAAGTCCATCATGCCATCAGTGGTAAAAAATAAAGAGGTCTATTGCAATATAATCCGTGATGTTCTCGTTAAACTGTGAACTTGATTGAACAGGGGTAATATGGTAGATGCCTTTCGGATGCATATAATG</genome_strand>
        <mrna_strand>TCCCATCTACGACAAATGTAACTGTTCTTCCCTACGTTTTTCATTCCATTATTATTGAAGAACCTTTCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTGCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTAATATGGCAGATGCCTTTCGGATGCATATAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343147" ref_strand="+" ref_description="SGN-E343147 [cTOF-17-M20]">
      <seq>acattagtacctttttttcagctcatcgcactgtcatcgccgatatccaatcaggacgaaaggcttattaagatctgccgccggttgtgatttcagtgttgccatcgtttgtcggttcttgaaatgcatctatcttctatctagcacaagtgatgggtatgtttaggagattagctgggcttctagggttttcaaaggatgaaggtcacgaagtgagagatgaaagtgtaggacctcacaataatcttcctcgtaaaggattcagtgtccctgttcaggttcctgtttccagagatctacctggtcctatccttgttcaatgcaatagaggtgctggaggcgttcagggattgagatggtatgccaagcgtcttagaatagatgaagacggagatgtggcagacgagttcctagatgagatcccagcagatgcaccttctagtacagaagagaataacaagaaattccgtaagtttgaattgaagtacactacaaagcctgcgaatgtaacaggccaggcactctcagctgcaggaaaaattaaatatcgtgtggaatatcaaggcaaattggagtggatttgaaaacttactatgtgtagtcattacatttgagatgaggatttcagtaaaatgactgcagctacgcagcttgcttgatatttttgctttattctgaaggacttacagtgtgtttatgtggagtggtattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="66080" stop="70693"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66380" g_stop="66726" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="347" r_length="347" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66727" i_stop="70027" i_length="3301">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70028" g_stop="70393" g_length="366"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="713" r_length="366" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E343147" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E343147" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66380" e_stop="66726"/>
          <exon e_start="70028" e_stop="70393"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATTAGTACCTTTTTTTCAGCTCATCGCACTGTCATCGCCGATATCCAATCAGGACGAAAGGCTTATTAAGATCTGCCGCCGGTTGTGATTTCAGTGTTGCCATCGTTTGTCGGTTCTTGAAATGCATCTATCTTCTATCTAGCACAAGTGATGGGTATGTTTAGGAGATTAGCTGGGCTTCTAGGGTTTTCAAAGGATGAAGGTCACGAAGTGAGAGATGAAAGTGTAGGACCTCACAATAATCTTCCTCGTAAAGGATTCAGTGTCCCTGTTCAGGTTCCTGTTTCCAGAGATCTACCTGGTCCTATCCTTGTTCAATGCAATAGAGGTGCTGGAGGCGTTCAGGTAATTAATGGAACAAATGGAGGAAACTTGTTGAGAACCTGTAATTCTGTTTTAATCATTTCTGCTTACAGCCTATCTGGTCAAAATGATCTGTAGACTATAAAGCCCTTAATACTGTTGAAAAATTCAAGTAATTATGTGTAGATACCATCTTGTTAGGCCGGCTTAATTAGACAATTTCCAAGTTACTGCTACACGAAAAAAGAAAGATAAATCCTGAAGTGTAGTTTCTGCCAAACACAGCTCAAATAATGATGTAATTGGACTGCTATATGTAACTGAAGAGTTACATTTCCCTACTTAGCGAAAATCTGTATTTTGCTTATGCAATAATTGAAGTTGTAGTTATTCACTCGACCGTAGCAGTTTGGAAATGGAAGTTTCCATGATCAGTGACCTTCCATGAGTGGAAATTAAGTTCTTTCTTTTAACTTTCCTTTAGGTCCTGAGAGAGGAGCTTTGCTGTAGATTTGATTGTGCACAGCTTGAATCATTTACCTGAAATTTCTATTTCCTGTTTTCGATTGTTCTAAGTGTGCTCCTAGTTTTAGTCTTTTAGAGACATCCTCATTCTTTGCTATTTCTAGGTTCCATGGATTCAAACATTCAGTTTCTCTTCTTTTGCTAGTTTTCTGTTAGTACTTATGGAATGTGCATATCTTAGCATATGTAGATCATGATATATATAAAGCTGTCTGACTGCAATGGATCTTCCAGAGTAATCATACAGAACTGTTTTTATGTAGTTTTAGATATCCTTGTATGATTTAAGTTTTTTAGGTTGTAGCCTTTTCTTCTTTAAGCAATTTTTCGAGATCCTCCTATTGTTTTGTGCAACCAGGGCAATAATATTTTTCGCCTGCAGACATGGTGTGGAGAGAGGAGTCAGATTTTTGCCTACAAATATTGGTCCCTGTGATGGTCTAGGCTATAAGTTTATCTGGATCACATAAGAGAAGTATACTGAACTAGATAGAGGCTAGAGCCCCAGTCCCTTTGAAGACATCTGATAAAATTGGAACGATACATAAGTTTAGCATAGCCCCTGCACAAAGATGATATGCACAAATCAGGAAATGGTTCAAATAAAGCTTGTCATTCGCAGGTCCCTCTTATGCAGTTACCTTGAGGAGAAGTATGAGGCGAGATTATGATGTGTCATCACTGTTTAGGCCTGAATCTTCAAGTTTCTTCTTTTATCCAATTAATGAAATTCCATGATAGAGTGTGTCAAACATAAAACAACATGCGATCTAAAGAAAGAATTTTGTTCTGCAACTTGGTTGCTAAGTGTTGAAGCTTTGCAAGTTTAGCTTTTAAACATAATTGTTGGGTGGTAGGAGGACTCCTCCAACATTTGTGTTCAGGTTATCTTCATCTTCTTTCTTTTTGATTAGGACAGACTCAGCTAAGCGACCGAAAACACAGCTCATTTGTAATTACAAATGCAAGATTTTCTTGTTTATTGGTTTAGATTTTGGGTCATGGTGATAGATTCCCTGGAAAGTGTAAGTTGTTTCATTGCCGGCATCAAGAAGATGTCGCATCTGCATATTTTGGACTGTTTGGCTAGAAAGGAACAAGACACGCTTTGAGTGGAAAGGACCGCAGATTGCTAGAGTAAAAATAGATGTATCAAGTTTTTTTTTTGGTGGCTAGAGTATGTTGTAGATGCTATTACCCATCAACGACTGTGGAAATGTTGTAGCTTTGTCGTTTACTTGGTCCTGTAACATTTTGGGACCATACTAATAAAAACTTTTACCCATCAAAGAAAAAATGGAAGATGCTATTGCAGAAATATTAGATGTCAGCTCCATACCTTAGAACATTTAGGCCCGGGGAGCTAATGAGGAAAACCAAAAAAAGTGCTGAAGTAACAAAATCTAGGAAGGGAACAACATTATTCGCAGGGGTTGGAGTACTCCAACTAAAAAGATACATAAGGCATTTAGCTTTCAGAGAGTTGTTAGGAGTTGAAATGCCTAAATCCTAAACCCTGCAAAGGGAAGGACATTCTTATGAAGGATTACTAAGTGTGTTAGGATTTTATTTGTAAGTTGCAACCATAGATGAGGTGTTGTTAAAGGGTCACTTGAGGTACTATTTATCGTGAAACTAAATGAAGTCCAAGTTGGATATTTCGTCTCACTTAGGCAGCAATTTTATGAGGATTCCGAGGCACTAAGGCATAAGAGGCTCTATCTTGAAGAATGTGACACTATACAGTGAATATTGTTGGTACATTGATGTATAAATTGCTAAGAGAAGTGTTACAAATGAACATGTGTTTTATCTGGATATGAAATTAGAATTTAGTTAGAGAATTAGTGGTCATTAAATTTGAATTTCTGATTTATCTGCATGCAAATCAGAAATTTAAAATTGGTTTGGACATGATTTTCTTACTTATACTTCACTTGGTGGTGATTTTCTCAACTTGTCAAAATAATAGTTTTTTTTGTGTACCTATACTCTTTGCATCATACATACATACGTATGTTACCTCCATTTCTTCTCCGCTGAAGTCCATACCATAACTGTGCCTTGTGCTCAAAACATGCTTATTGGACCTGCTACCATCTGTGGCTAGGTTTCTAAGTTCCAGGAACTTGCTGAGATAAGGCGGAGAAGTCCTCTGGGTATCTCCTCACTCCTAGCTTGTTATACATACTGATGACTCTGGGAGATCAAGGGGTCTTTGCATTAACCTTCTGTTGTATGAGCTATGAGACTGTGTGTGCCGTCTGATAAAGAGTATTTGAAAGGCAGAAAGAATAATTTTTTCATTAGTTTGTTCTTCGCGTATTCTTTTATCTTCAAGGACTTCTTAATGCTCTGTATCATACTCAAAGTTCATCTATAGCCAACCTTCCTATCCCTTTAAAACATAAGAAATAGGAAAAAGGTATCTATAAAAAAATGAATTTCTAGATTAGAGAGGACATGGTAGATTTTCTGATTAATTTAAGTTGTTCAGACCGTTGTCCTGCTGCAGTTTTTTTAATGCCTGCCGGTGCTTCTTTGATGGAACCTTTGGTGGTTCCGGAGTGTTTAAGTTTCTTGGTTCATTTGGAATCGTATGAGTAAAAGTGTGTTCTTTAGTGGTGAAGAGAGAATGACAAATTTTTTTGATAGTTCATATCGTGTACGACTTGTTCATTTGATTAAAAATCACTATTATTTCTTGATTAATGCTGAGTGCATCCTGTTATCTGCTTTTGCTATCTCAGAAACTTAGAATAATTGGTAAGTTTGTGATGCACATCTTTAATAGTTTTACATTTTTCTCCGTGCTTAGGGATTGAGATGGTATGCCAAGCGTCTTAGAATAGATGAAGACGGAGATGTGGCAGACGAGTTCCTAGATGAGATCCCAGCAGATGCACCTTCTAGTACAGAAGAGAATAACAAGAAATTCCGTAAGTTTGAATTGAAGTACACTACAAAGCCTGCGAATGTAACAGGCCAGGCACTCTCAGCTGCAGGAAAAATTAAATATCGTGTGGAATATCAAGGCAAATTGGAGTGGATTTGAAAACTTACTATGTGTAGTCATTACATTTGAGATGAGGATTTCAGTAAAATGACTGCAGCTACGCAGCTTGCTTGATATTTTTGCTTTATTCTGAAGGACTTACAGTGTGTTTATGTGGAGTGGTATTGA</genome_strand>
        <mrna_strand>ACATTAGTACCTTTTTTTCAGCTCATCGCACTGTCATCGCCGATATCCAATCAGGACGAAAGGCTTATTAAGATCTGCCGCCGGTTGTGATTTCAGTGTTGCCATCGTTTGTCGGTTCTTGAAATGCATCTATCTTCTATCTAGCACAAGTGATGGGTATGTTTAGGAGATTAGCTGGGCTTCTAGGGTTTTCAAAGGATGAAGGTCACGAAGTGAGAGATGAAAGTGTAGGACCTCACAATAATCTTCCTCGTAAAGGATTCAGTGTCCCTGTTCAGGTTCCTGTTTCCAGAGATCTACCTGGTCCTATCCTTGTTCAATGCAATAGAGGTGCTGGAGGCGTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTGAGATGGTATGCCAAGCGTCTTAGAATAGATGAAGACGGAGATGTGGCAGACGAGTTCCTAGATGAGATCCCAGCAGATGCACCTTCTAGTACAGAAGAGAATAACAAGAAATTCCGTAAGTTTGAATTGAAGTACACTACAAAGCCTGCGAATGTAACAGGCCAGGCACTCTCAGCTGCAGGAAAAATTAAATATCGTGTGGAATATCAAGGCAAATTGGAGTGGATTTGAAAACTTACTATGTGTAGTCATTACATTTGAGATGAGGATTTCAGTAAAATGACTGCAGCTACGCAGCTTGCTTGATATTTTTGCTTTATTCTGAAGGACTTACAGTGTGTTTATGTGGAGTGGTATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E312431" ref_strand="+" ref_description="SGN-E312431 [cLEZ-20-E16]">
      <seq>tccaatcatgacgaaaggcttattaagatctgccgccggttgtgatttcagtgttgccatcgtttgtcggttcttgaaatgcatctatcttctatctagcacaagtgatgggtatgtttaggagattagctgggcttctagggttttcaaaggatgaaggtcacgaagtgagagatgaaagtgtaggacctcacaataatcttcctcgtaaaggattcagtgtccctgttcaggttcctgtttccagagatctacctggtcctatccttgttcaatgcaatagaggtgctggaggcgttcagggattgagatggtatgccaagcgtcttagaatagatgaagacggagatgtggcagacgagttcctagatgagatcccagcagatgcaccttctagtacagaagagaataacaagaaattccgttagtttgaattgaagtacactacaaagcctgcgaatgtaacaggccaggcactctcagctgcaggaaaaattaaatatcgtgtggaatatcaaggcaaattggagtggatttgaaaacttactatgtgtagtcattacatttgagatgaggatttcagtaaaatgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="66125" stop="70618"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66425" g_stop="66726" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="302" r_length="302" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66727" i_stop="70027" i_length="3301">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70028" g_stop="70318" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="593" r_length="291" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E312431" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>593</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E312431" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66425" e_stop="66726"/>
          <exon e_start="70028" e_stop="70318"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAATCAGGACGAAAGGCTTATTAAGATCTGCCGCCGGTTGTGATTTCAGTGTTGCCATCGTTTGTCGGTTCTTGAAATGCATCTATCTTCTATCTAGCACAAGTGATGGGTATGTTTAGGAGATTAGCTGGGCTTCTAGGGTTTTCAAAGGATGAAGGTCACGAAGTGAGAGATGAAAGTGTAGGACCTCACAATAATCTTCCTCGTAAAGGATTCAGTGTCCCTGTTCAGGTTCCTGTTTCCAGAGATCTACCTGGTCCTATCCTTGTTCAATGCAATAGAGGTGCTGGAGGCGTTCAGGTAATTAATGGAACAAATGGAGGAAACTTGTTGAGAACCTGTAATTCTGTTTTAATCATTTCTGCTTACAGCCTATCTGGTCAAAATGATCTGTAGACTATAAAGCCCTTAATACTGTTGAAAAATTCAAGTAATTATGTGTAGATACCATCTTGTTAGGCCGGCTTAATTAGACAATTTCCAAGTTACTGCTACACGAAAAAAGAAAGATAAATCCTGAAGTGTAGTTTCTGCCAAACACAGCTCAAATAATGATGTAATTGGACTGCTATATGTAACTGAAGAGTTACATTTCCCTACTTAGCGAAAATCTGTATTTTGCTTATGCAATAATTGAAGTTGTAGTTATTCACTCGACCGTAGCAGTTTGGAAATGGAAGTTTCCATGATCAGTGACCTTCCATGAGTGGAAATTAAGTTCTTTCTTTTAACTTTCCTTTAGGTCCTGAGAGAGGAGCTTTGCTGTAGATTTGATTGTGCACAGCTTGAATCATTTACCTGAAATTTCTATTTCCTGTTTTCGATTGTTCTAAGTGTGCTCCTAGTTTTAGTCTTTTAGAGACATCCTCATTCTTTGCTATTTCTAGGTTCCATGGATTCAAACATTCAGTTTCTCTTCTTTTGCTAGTTTTCTGTTAGTACTTATGGAATGTGCATATCTTAGCATATGTAGATCATGATATATATAAAGCTGTCTGACTGCAATGGATCTTCCAGAGTAATCATACAGAACTGTTTTTATGTAGTTTTAGATATCCTTGTATGATTTAAGTTTTTTAGGTTGTAGCCTTTTCTTCTTTAAGCAATTTTTCGAGATCCTCCTATTGTTTTGTGCAACCAGGGCAATAATATTTTTCGCCTGCAGACATGGTGTGGAGAGAGGAGTCAGATTTTTGCCTACAAATATTGGTCCCTGTGATGGTCTAGGCTATAAGTTTATCTGGATCACATAAGAGAAGTATACTGAACTAGATAGAGGCTAGAGCCCCAGTCCCTTTGAAGACATCTGATAAAATTGGAACGATACATAAGTTTAGCATAGCCCCTGCACAAAGATGATATGCACAAATCAGGAAATGGTTCAAATAAAGCTTGTCATTCGCAGGTCCCTCTTATGCAGTTACCTTGAGGAGAAGTATGAGGCGAGATTATGATGTGTCATCACTGTTTAGGCCTGAATCTTCAAGTTTCTTCTTTTATCCAATTAATGAAATTCCATGATAGAGTGTGTCAAACATAAAACAACATGCGATCTAAAGAAAGAATTTTGTTCTGCAACTTGGTTGCTAAGTGTTGAAGCTTTGCAAGTTTAGCTTTTAAACATAATTGTTGGGTGGTAGGAGGACTCCTCCAACATTTGTGTTCAGGTTATCTTCATCTTCTTTCTTTTTGATTAGGACAGACTCAGCTAAGCGACCGAAAACACAGCTCATTTGTAATTACAAATGCAAGATTTTCTTGTTTATTGGTTTAGATTTTGGGTCATGGTGATAGATTCCCTGGAAAGTGTAAGTTGTTTCATTGCCGGCATCAAGAAGATGTCGCATCTGCATATTTTGGACTGTTTGGCTAGAAAGGAACAAGACACGCTTTGAGTGGAAAGGACCGCAGATTGCTAGAGTAAAAATAGATGTATCAAGTTTTTTTTTTGGTGGCTAGAGTATGTTGTAGATGCTATTACCCATCAACGACTGTGGAAATGTTGTAGCTTTGTCGTTTACTTGGTCCTGTAACATTTTGGGACCATACTAATAAAAACTTTTACCCATCAAAGAAAAAATGGAAGATGCTATTGCAGAAATATTAGATGTCAGCTCCATACCTTAGAACATTTAGGCCCGGGGAGCTAATGAGGAAAACCAAAAAAAGTGCTGAAGTAACAAAATCTAGGAAGGGAACAACATTATTCGCAGGGGTTGGAGTACTCCAACTAAAAAGATACATAAGGCATTTAGCTTTCAGAGAGTTGTTAGGAGTTGAAATGCCTAAATCCTAAACCCTGCAAAGGGAAGGACATTCTTATGAAGGATTACTAAGTGTGTTAGGATTTTATTTGTAAGTTGCAACCATAGATGAGGTGTTGTTAAAGGGTCACTTGAGGTACTATTTATCGTGAAACTAAATGAAGTCCAAGTTGGATATTTCGTCTCACTTAGGCAGCAATTTTATGAGGATTCCGAGGCACTAAGGCATAAGAGGCTCTATCTTGAAGAATGTGACACTATACAGTGAATATTGTTGGTACATTGATGTATAAATTGCTAAGAGAAGTGTTACAAATGAACATGTGTTTTATCTGGATATGAAATTAGAATTTAGTTAGAGAATTAGTGGTCATTAAATTTGAATTTCTGATTTATCTGCATGCAAATCAGAAATTTAAAATTGGTTTGGACATGATTTTCTTACTTATACTTCACTTGGTGGTGATTTTCTCAACTTGTCAAAATAATAGTTTTTTTTGTGTACCTATACTCTTTGCATCATACATACATACGTATGTTACCTCCATTTCTTCTCCGCTGAAGTCCATACCATAACTGTGCCTTGTGCTCAAAACATGCTTATTGGACCTGCTACCATCTGTGGCTAGGTTTCTAAGTTCCAGGAACTTGCTGAGATAAGGCGGAGAAGTCCTCTGGGTATCTCCTCACTCCTAGCTTGTTATACATACTGATGACTCTGGGAGATCAAGGGGTCTTTGCATTAACCTTCTGTTGTATGAGCTATGAGACTGTGTGTGCCGTCTGATAAAGAGTATTTGAAAGGCAGAAAGAATAATTTTTTCATTAGTTTGTTCTTCGCGTATTCTTTTATCTTCAAGGACTTCTTAATGCTCTGTATCATACTCAAAGTTCATCTATAGCCAACCTTCCTATCCCTTTAAAACATAAGAAATAGGAAAAAGGTATCTATAAAAAAATGAATTTCTAGATTAGAGAGGACATGGTAGATTTTCTGATTAATTTAAGTTGTTCAGACCGTTGTCCTGCTGCAGTTTTTTTAATGCCTGCCGGTGCTTCTTTGATGGAACCTTTGGTGGTTCCGGAGTGTTTAAGTTTCTTGGTTCATTTGGAATCGTATGAGTAAAAGTGTGTTCTTTAGTGGTGAAGAGAGAATGACAAATTTTTTTGATAGTTCATATCGTGTACGACTTGTTCATTTGATTAAAAATCACTATTATTTCTTGATTAATGCTGAGTGCATCCTGTTATCTGCTTTTGCTATCTCAGAAACTTAGAATAATTGGTAAGTTTGTGATGCACATCTTTAATAGTTTTACATTTTTCTCCGTGCTTAGGGATTGAGATGGTATGCCAAGCGTCTTAGAATAGATGAAGACGGAGATGTGGCAGACGAGTTCCTAGATGAGATCCCAGCAGATGCACCTTCTAGTACAGAAGAGAATAACAAGAAATTCCGTAAGTTTGAATTGAAGTACACTACAAAGCCTGCGAATGTAACAGGCCAGGCACTCTCAGCTGCAGGAAAAATTAAATATCGTGTGGAATATCAAGGCAAATTGGAGTGGATTTGAAAACTTACTATGTGTAGTCATTACATTTGAGATGAGGATTTCAGTAAAATGACT</genome_strand>
        <mrna_strand>TCCAATCATGACGAAAGGCTTATTAAGATCTGCCGCCGGTTGTGATTTCAGTGTTGCCATCGTTTGTCGGTTCTTGAAATGCATCTATCTTCTATCTAGCACAAGTGATGGGTATGTTTAGGAGATTAGCTGGGCTTCTAGGGTTTTCAAAGGATGAAGGTCACGAAGTGAGAGATGAAAGTGTAGGACCTCACAATAATCTTCCTCGTAAAGGATTCAGTGTCCCTGTTCAGGTTCCTGTTTCCAGAGATCTACCTGGTCCTATCCTTGTTCAATGCAATAGAGGTGCTGGAGGCGTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTGAGATGGTATGCCAAGCGTCTTAGAATAGATGAAGACGGAGATGTGGCAGACGAGTTCCTAGATGAGATCCCAGCAGATGCACCTTCTAGTACAGAAGAGAATAACAAGAAATTCCGTTAGTTTGAATTGAAGTACACTACAAAGCCTGCGAATGTAACAGGCCAGGCACTCTCAGCTGCAGGAAAAATTAAATATCGTGTGGAATATCAAGGCAAATTGGAGTGGATTTGAAAACTTACTATGTGTAGTCATTACATTTGAGATGAGGATTTCAGTAAAATGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E312429" ref_strand="+" ref_description="SGN-E312429 [cLEZ-20-E6]">
      <seq>tccaatcaggacgaaaggcttattaagatctgccgccggttgtgatttcagtgttgccatcgtttgtcggttcttgaaatgcatctatcttctatctagcacaagtgatgggtatgtttaggagattagctgggcttctagggttttcaaaggatgaaggtcacgaagtgagagatgaaagtgtaggacctcacaataatcttcctcgtaaaggattcagtgtccctgttcaggttcctgtttccagagatctacctggtcctatccttgttcaatgcaatagaggtgctggaggcgttcagggattgagatggtatgccaagcgtcttagaatagatgaagacggagatgtggcagacgagttcctagatgagatcccagcagatgcaccttctagtacagaagagaataacaagaaattccgtaagtttgaattgaagtacactacaaagcctgcgaatgtaacaggccaggcactctcagctgcaggaaaaattaaaatatcgtgtggaatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="66125" stop="70540"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66425" g_stop="66726" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="302" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66727" i_stop="70027" i_length="3301">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70028" g_stop="70240" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="516" r_length="214" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E312429" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E312429" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66425" e_stop="66726"/>
          <exon e_start="70028" e_stop="70240"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAATCAGGACGAAAGGCTTATTAAGATCTGCCGCCGGTTGTGATTTCAGTGTTGCCATCGTTTGTCGGTTCTTGAAATGCATCTATCTTCTATCTAGCACAAGTGATGGGTATGTTTAGGAGATTAGCTGGGCTTCTAGGGTTTTCAAAGGATGAAGGTCACGAAGTGAGAGATGAAAGTGTAGGACCTCACAATAATCTTCCTCGTAAAGGATTCAGTGTCCCTGTTCAGGTTCCTGTTTCCAGAGATCTACCTGGTCCTATCCTTGTTCAATGCAATAGAGGTGCTGGAGGCGTTCAGGTAATTAATGGAACAAATGGAGGAAACTTGTTGAGAACCTGTAATTCTGTTTTAATCATTTCTGCTTACAGCCTATCTGGTCAAAATGATCTGTAGACTATAAAGCCCTTAATACTGTTGAAAAATTCAAGTAATTATGTGTAGATACCATCTTGTTAGGCCGGCTTAATTAGACAATTTCCAAGTTACTGCTACACGAAAAAAGAAAGATAAATCCTGAAGTGTAGTTTCTGCCAAACACAGCTCAAATAATGATGTAATTGGACTGCTATATGTAACTGAAGAGTTACATTTCCCTACTTAGCGAAAATCTGTATTTTGCTTATGCAATAATTGAAGTTGTAGTTATTCACTCGACCGTAGCAGTTTGGAAATGGAAGTTTCCATGATCAGTGACCTTCCATGAGTGGAAATTAAGTTCTTTCTTTTAACTTTCCTTTAGGTCCTGAGAGAGGAGCTTTGCTGTAGATTTGATTGTGCACAGCTTGAATCATTTACCTGAAATTTCTATTTCCTGTTTTCGATTGTTCTAAGTGTGCTCCTAGTTTTAGTCTTTTAGAGACATCCTCATTCTTTGCTATTTCTAGGTTCCATGGATTCAAACATTCAGTTTCTCTTCTTTTGCTAGTTTTCTGTTAGTACTTATGGAATGTGCATATCTTAGCATATGTAGATCATGATATATATAAAGCTGTCTGACTGCAATGGATCTTCCAGAGTAATCATACAGAACTGTTTTTATGTAGTTTTAGATATCCTTGTATGATTTAAGTTTTTTAGGTTGTAGCCTTTTCTTCTTTAAGCAATTTTTCGAGATCCTCCTATTGTTTTGTGCAACCAGGGCAATAATATTTTTCGCCTGCAGACATGGTGTGGAGAGAGGAGTCAGATTTTTGCCTACAAATATTGGTCCCTGTGATGGTCTAGGCTATAAGTTTATCTGGATCACATAAGAGAAGTATACTGAACTAGATAGAGGCTAGAGCCCCAGTCCCTTTGAAGACATCTGATAAAATTGGAACGATACATAAGTTTAGCATAGCCCCTGCACAAAGATGATATGCACAAATCAGGAAATGGTTCAAATAAAGCTTGTCATTCGCAGGTCCCTCTTATGCAGTTACCTTGAGGAGAAGTATGAGGCGAGATTATGATGTGTCATCACTGTTTAGGCCTGAATCTTCAAGTTTCTTCTTTTATCCAATTAATGAAATTCCATGATAGAGTGTGTCAAACATAAAACAACATGCGATCTAAAGAAAGAATTTTGTTCTGCAACTTGGTTGCTAAGTGTTGAAGCTTTGCAAGTTTAGCTTTTAAACATAATTGTTGGGTGGTAGGAGGACTCCTCCAACATTTGTGTTCAGGTTATCTTCATCTTCTTTCTTTTTGATTAGGACAGACTCAGCTAAGCGACCGAAAACACAGCTCATTTGTAATTACAAATGCAAGATTTTCTTGTTTATTGGTTTAGATTTTGGGTCATGGTGATAGATTCCCTGGAAAGTGTAAGTTGTTTCATTGCCGGCATCAAGAAGATGTCGCATCTGCATATTTTGGACTGTTTGGCTAGAAAGGAACAAGACACGCTTTGAGTGGAAAGGACCGCAGATTGCTAGAGTAAAAATAGATGTATCAAGTTTTTTTTTTGGTGGCTAGAGTATGTTGTAGATGCTATTACCCATCAACGACTGTGGAAATGTTGTAGCTTTGTCGTTTACTTGGTCCTGTAACATTTTGGGACCATACTAATAAAAACTTTTACCCATCAAAGAAAAAATGGAAGATGCTATTGCAGAAATATTAGATGTCAGCTCCATACCTTAGAACATTTAGGCCCGGGGAGCTAATGAGGAAAACCAAAAAAAGTGCTGAAGTAACAAAATCTAGGAAGGGAACAACATTATTCGCAGGGGTTGGAGTACTCCAACTAAAAAGATACATAAGGCATTTAGCTTTCAGAGAGTTGTTAGGAGTTGAAATGCCTAAATCCTAAACCCTGCAAAGGGAAGGACATTCTTATGAAGGATTACTAAGTGTGTTAGGATTTTATTTGTAAGTTGCAACCATAGATGAGGTGTTGTTAAAGGGTCACTTGAGGTACTATTTATCGTGAAACTAAATGAAGTCCAAGTTGGATATTTCGTCTCACTTAGGCAGCAATTTTATGAGGATTCCGAGGCACTAAGGCATAAGAGGCTCTATCTTGAAGAATGTGACACTATACAGTGAATATTGTTGGTACATTGATGTATAAATTGCTAAGAGAAGTGTTACAAATGAACATGTGTTTTATCTGGATATGAAATTAGAATTTAGTTAGAGAATTAGTGGTCATTAAATTTGAATTTCTGATTTATCTGCATGCAAATCAGAAATTTAAAATTGGTTTGGACATGATTTTCTTACTTATACTTCACTTGGTGGTGATTTTCTCAACTTGTCAAAATAATAGTTTTTTTTGTGTACCTATACTCTTTGCATCATACATACATACGTATGTTACCTCCATTTCTTCTCCGCTGAAGTCCATACCATAACTGTGCCTTGTGCTCAAAACATGCTTATTGGACCTGCTACCATCTGTGGCTAGGTTTCTAAGTTCCAGGAACTTGCTGAGATAAGGCGGAGAAGTCCTCTGGGTATCTCCTCACTCCTAGCTTGTTATACATACTGATGACTCTGGGAGATCAAGGGGTCTTTGCATTAACCTTCTGTTGTATGAGCTATGAGACTGTGTGTGCCGTCTGATAAAGAGTATTTGAAAGGCAGAAAGAATAATTTTTTCATTAGTTTGTTCTTCGCGTATTCTTTTATCTTCAAGGACTTCTTAATGCTCTGTATCATACTCAAAGTTCATCTATAGCCAACCTTCCTATCCCTTTAAAACATAAGAAATAGGAAAAAGGTATCTATAAAAAAATGAATTTCTAGATTAGAGAGGACATGGTAGATTTTCTGATTAATTTAAGTTGTTCAGACCGTTGTCCTGCTGCAGTTTTTTTAATGCCTGCCGGTGCTTCTTTGATGGAACCTTTGGTGGTTCCGGAGTGTTTAAGTTTCTTGGTTCATTTGGAATCGTATGAGTAAAAGTGTGTTCTTTAGTGGTGAAGAGAGAATGACAAATTTTTTTGATAGTTCATATCGTGTACGACTTGTTCATTTGATTAAAAATCACTATTATTTCTTGATTAATGCTGAGTGCATCCTGTTATCTGCTTTTGCTATCTCAGAAACTTAGAATAATTGGTAAGTTTGTGATGCACATCTTTAATAGTTTTACATTTTTCTCCGTGCTTAGGGATTGAGATGGTATGCCAAGCGTCTTAGAATAGATGAAGACGGAGATGTGGCAGACGAGTTCCTAGATGAGATCCCAGCAGATGCACCTTCTAGTACAGAAGAGAATAACAAGAAATTCCGTAAGTTTGAATTGAAGTACACTACAAAGCCTGCGAATGTAACAGGCCAGGCACTCTCAGCTGCAGGAAAAATT-AAATATCGTGTGGAATAT</genome_strand>
        <mrna_strand>TCCAATCAGGACGAAAGGCTTATTAAGATCTGCCGCCGGTTGTGATTTCAGTGTTGCCATCGTTTGTCGGTTCTTGAAATGCATCTATCTTCTATCTAGCACAAGTGATGGGTATGTTTAGGAGATTAGCTGGGCTTCTAGGGTTTTCAAAGGATGAAGGTCACGAAGTGAGAGATGAAAGTGTAGGACCTCACAATAATCTTCCTCGTAAAGGATTCAGTGTCCCTGTTCAGGTTCCTGTTTCCAGAGATCTACCTGGTCCTATCCTTGTTCAATGCAATAGAGGTGCTGGAGGCGTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTGAGATGGTATGCCAAGCGTCTTAGAATAGATGAAGACGGAGATGTGGCAGACGAGTTCCTAGATGAGATCCCAGCAGATGCACCTTCTAGTACAGAAGAGAATAACAAGAAATTCCGTAAGTTTGAATTGAAGTACACTACAAAGCCTGCGAATGTAACAGGCCAGGCACTCTCAGCTGCAGGAAAAATTAAAATATCGTGTGGAATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E321006" ref_strand="+" ref_description="SGN-E321006 [cTOB-13-J3]">
      <seq>gacgaaaggcttattaagatctgcccgccggttgtgatttcagtgttgccatcgtttgtcggttcttgaaatgcatctattcttctatctagcacaagtgatgggtatgtttaggagaatagctgggcttctagggttttcaaaggatgaaggtcacgaagtgagagatgaaagtgtaggacctcacaataatcttcctcgtaaaggattcagtgtccctgttcaggttcctgtttccagagatctacctggtcctatccttgttcaatgcaatagaggtgctggaggcgttcaaggattgagatggtatgccaagcgtcttagaatagatgaagacggagatgtggcagacgagttcctagatgagatcccagcagatgcaccttctagtacagaagagaataacaagaaattccgtaagtttgaattgaagtacactacaaagcctgcgaatgtaacatgccaggcactctcagctgcaggaaaaattaaatatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="66134" stop="70529"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66434" g_stop="66726" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="295" r_length="295" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66727" i_stop="70027" i_length="3301">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70028" g_stop="70229" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="497" r_length="202" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E321006" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>495</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E321006" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66434" e_stop="66726"/>
          <exon e_start="70028" e_stop="70229"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACGAAAGGCTTATTAAGATCTG-CCGCCGGTTGTGATTTCAGTGTTGCCATCGTTTGTCGGTTCTTGAAATGCATCTAT-CTTCTATCTAGCACAAGTGATGGGTATGTTTAGGAGATTAGCTGGGCTTCTAGGGTTTTCAAAGGATGAAGGTCACGAAGTGAGAGATGAAAGTGTAGGACCTCACAATAATCTTCCTCGTAAAGGATTCAGTGTCCCTGTTCAGGTTCCTGTTTCCAGAGATCTACCTGGTCCTATCCTTGTTCAATGCAATAGAGGTGCTGGAGGCGTTCAGGTAATTAATGGAACAAATGGAGGAAACTTGTTGAGAACCTGTAATTCTGTTTTAATCATTTCTGCTTACAGCCTATCTGGTCAAAATGATCTGTAGACTATAAAGCCCTTAATACTGTTGAAAAATTCAAGTAATTATGTGTAGATACCATCTTGTTAGGCCGGCTTAATTAGACAATTTCCAAGTTACTGCTACACGAAAAAAGAAAGATAAATCCTGAAGTGTAGTTTCTGCCAAACACAGCTCAAATAATGATGTAATTGGACTGCTATATGTAACTGAAGAGTTACATTTCCCTACTTAGCGAAAATCTGTATTTTGCTTATGCAATAATTGAAGTTGTAGTTATTCACTCGACCGTAGCAGTTTGGAAATGGAAGTTTCCATGATCAGTGACCTTCCATGAGTGGAAATTAAGTTCTTTCTTTTAACTTTCCTTTAGGTCCTGAGAGAGGAGCTTTGCTGTAGATTTGATTGTGCACAGCTTGAATCATTTACCTGAAATTTCTATTTCCTGTTTTCGATTGTTCTAAGTGTGCTCCTAGTTTTAGTCTTTTAGAGACATCCTCATTCTTTGCTATTTCTAGGTTCCATGGATTCAAACATTCAGTTTCTCTTCTTTTGCTAGTTTTCTGTTAGTACTTATGGAATGTGCATATCTTAGCATATGTAGATCATGATATATATAAAGCTGTCTGACTGCAATGGATCTTCCAGAGTAATCATACAGAACTGTTTTTATGTAGTTTTAGATATCCTTGTATGATTTAAGTTTTTTAGGTTGTAGCCTTTTCTTCTTTAAGCAATTTTTCGAGATCCTCCTATTGTTTTGTGCAACCAGGGCAATAATATTTTTCGCCTGCAGACATGGTGTGGAGAGAGGAGTCAGATTTTTGCCTACAAATATTGGTCCCTGTGATGGTCTAGGCTATAAGTTTATCTGGATCACATAAGAGAAGTATACTGAACTAGATAGAGGCTAGAGCCCCAGTCCCTTTGAAGACATCTGATAAAATTGGAACGATACATAAGTTTAGCATAGCCCCTGCACAAAGATGATATGCACAAATCAGGAAATGGTTCAAATAAAGCTTGTCATTCGCAGGTCCCTCTTATGCAGTTACCTTGAGGAGAAGTATGAGGCGAGATTATGATGTGTCATCACTGTTTAGGCCTGAATCTTCAAGTTTCTTCTTTTATCCAATTAATGAAATTCCATGATAGAGTGTGTCAAACATAAAACAACATGCGATCTAAAGAAAGAATTTTGTTCTGCAACTTGGTTGCTAAGTGTTGAAGCTTTGCAAGTTTAGCTTTTAAACATAATTGTTGGGTGGTAGGAGGACTCCTCCAACATTTGTGTTCAGGTTATCTTCATCTTCTTTCTTTTTGATTAGGACAGACTCAGCTAAGCGACCGAAAACACAGCTCATTTGTAATTACAAATGCAAGATTTTCTTGTTTATTGGTTTAGATTTTGGGTCATGGTGATAGATTCCCTGGAAAGTGTAAGTTGTTTCATTGCCGGCATCAAGAAGATGTCGCATCTGCATATTTTGGACTGTTTGGCTAGAAAGGAACAAGACACGCTTTGAGTGGAAAGGACCGCAGATTGCTAGAGTAAAAATAGATGTATCAAGTTTTTTTTTTGGTGGCTAGAGTATGTTGTAGATGCTATTACCCATCAACGACTGTGGAAATGTTGTAGCTTTGTCGTTTACTTGGTCCTGTAACATTTTGGGACCATACTAATAAAAACTTTTACCCATCAAAGAAAAAATGGAAGATGCTATTGCAGAAATATTAGATGTCAGCTCCATACCTTAGAACATTTAGGCCCGGGGAGCTAATGAGGAAAACCAAAAAAAGTGCTGAAGTAACAAAATCTAGGAAGGGAACAACATTATTCGCAGGGGTTGGAGTACTCCAACTAAAAAGATACATAAGGCATTTAGCTTTCAGAGAGTTGTTAGGAGTTGAAATGCCTAAATCCTAAACCCTGCAAAGGGAAGGACATTCTTATGAAGGATTACTAAGTGTGTTAGGATTTTATTTGTAAGTTGCAACCATAGATGAGGTGTTGTTAAAGGGTCACTTGAGGTACTATTTATCGTGAAACTAAATGAAGTCCAAGTTGGATATTTCGTCTCACTTAGGCAGCAATTTTATGAGGATTCCGAGGCACTAAGGCATAAGAGGCTCTATCTTGAAGAATGTGACACTATACAGTGAATATTGTTGGTACATTGATGTATAAATTGCTAAGAGAAGTGTTACAAATGAACATGTGTTTTATCTGGATATGAAATTAGAATTTAGTTAGAGAATTAGTGGTCATTAAATTTGAATTTCTGATTTATCTGCATGCAAATCAGAAATTTAAAATTGGTTTGGACATGATTTTCTTACTTATACTTCACTTGGTGGTGATTTTCTCAACTTGTCAAAATAATAGTTTTTTTTGTGTACCTATACTCTTTGCATCATACATACATACGTATGTTACCTCCATTTCTTCTCCGCTGAAGTCCATACCATAACTGTGCCTTGTGCTCAAAACATGCTTATTGGACCTGCTACCATCTGTGGCTAGGTTTCTAAGTTCCAGGAACTTGCTGAGATAAGGCGGAGAAGTCCTCTGGGTATCTCCTCACTCCTAGCTTGTTATACATACTGATGACTCTGGGAGATCAAGGGGTCTTTGCATTAACCTTCTGTTGTATGAGCTATGAGACTGTGTGTGCCGTCTGATAAAGAGTATTTGAAAGGCAGAAAGAATAATTTTTTCATTAGTTTGTTCTTCGCGTATTCTTTTATCTTCAAGGACTTCTTAATGCTCTGTATCATACTCAAAGTTCATCTATAGCCAACCTTCCTATCCCTTTAAAACATAAGAAATAGGAAAAAGGTATCTATAAAAAAATGAATTTCTAGATTAGAGAGGACATGGTAGATTTTCTGATTAATTTAAGTTGTTCAGACCGTTGTCCTGCTGCAGTTTTTTTAATGCCTGCCGGTGCTTCTTTGATGGAACCTTTGGTGGTTCCGGAGTGTTTAAGTTTCTTGGTTCATTTGGAATCGTATGAGTAAAAGTGTGTTCTTTAGTGGTGAAGAGAGAATGACAAATTTTTTTGATAGTTCATATCGTGTACGACTTGTTCATTTGATTAAAAATCACTATTATTTCTTGATTAATGCTGAGTGCATCCTGTTATCTGCTTTTGCTATCTCAGAAACTTAGAATAATTGGTAAGTTTGTGATGCACATCTTTAATAGTTTTACATTTTTCTCCGTGCTTAGGGATTGAGATGGTATGCCAAGCGTCTTAGAATAGATGAAGACGGAGATGTGGCAGACGAGTTCCTAGATGAGATCCCAGCAGATGCACCTTCTAGTACAGAAGAGAATAACAAGAAATTCCGTAAGTTTGAATTGAAGTACACTACAAAGCCTGCGAATGTAACAGGCCAGGCACTCTCAGCTGCAGGAAAAATTAAATATC</genome_strand>
        <mrna_strand>GACGAAAGGCTTATTAAGATCTGCCCGCCGGTTGTGATTTCAGTGTTGCCATCGTTTGTCGGTTCTTGAAATGCATCTATTCTTCTATCTAGCACAAGTGATGGGTATGTTTAGGAGAATAGCTGGGCTTCTAGGGTTTTCAAAGGATGAAGGTCACGAAGTGAGAGATGAAAGTGTAGGACCTCACAATAATCTTCCTCGTAAAGGATTCAGTGTCCCTGTTCAGGTTCCTGTTTCCAGAGATCTACCTGGTCCTATCCTTGTTCAATGCAATAGAGGTGCTGGAGGCGTTCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTGAGATGGTATGCCAAGCGTCTTAGAATAGATGAAGACGGAGATGTGGCAGACGAGTTCCTAGATGAGATCCCAGCAGATGCACCTTCTAGTACAGAAGAGAATAACAAGAAATTCCGTAAGTTTGAATTGAAGTACACTACAAAGCCTGCGAATGTAACATGCCAGGCACTCTCAGCTGCAGGAAAAATTAAATATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E319811" ref_strand="+" ref_description="SGN-E319811 [cTOB-12-N5]">
      <seq>gggcttctagggttttcaaaggatgaaggtcacgaagtgagagatgaaagtgtaggacctcacaataatcttcctcgtaaaggattcagtgtccctgttcaggttcctgtttccagagatctacctggtcctatccttgttcaatgcaatagaggtgctggaggcgttcagggattgagatggtatgccaagcgtcttagaatagatgaagacggagatgtggcagacgagttcctagatgagatcccagcagatgcaccttctagtacagaagagaataacaagaaattccgtaagtttgaattgaagtacactacaaagcctgcgaatgtaacaggccaggcactctcagctgcaggaaaaattaaatatcgtgtggaatatcaaggcaaattggagtggatttgaaaacttactatgtgtagtcattacatttgagatgaggatttcagtaaaatgactgcagctacgcagcttgcttgatatttttgctttattctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="66256" stop="70657"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66556" g_stop="66726" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66727" i_stop="70027" i_length="3301">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70028" g_stop="70357" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="501" r_length="330" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E319811" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E319811" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66556" e_stop="66726"/>
          <exon e_start="70028" e_stop="70357"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGCTTCTAGGGTTTTCAAAGGATGAAGGTCACGAAGTGAGAGATGAAAGTGTAGGACCTCACAATAATCTTCCTCGTAAAGGATTCAGTGTCCCTGTTCAGGTTCCTGTTTCCAGAGATCTACCTGGTCCTATCCTTGTTCAATGCAATAGAGGTGCTGGAGGCGTTCAGGTAATTAATGGAACAAATGGAGGAAACTTGTTGAGAACCTGTAATTCTGTTTTAATCATTTCTGCTTACAGCCTATCTGGTCAAAATGATCTGTAGACTATAAAGCCCTTAATACTGTTGAAAAATTCAAGTAATTATGTGTAGATACCATCTTGTTAGGCCGGCTTAATTAGACAATTTCCAAGTTACTGCTACACGAAAAAAGAAAGATAAATCCTGAAGTGTAGTTTCTGCCAAACACAGCTCAAATAATGATGTAATTGGACTGCTATATGTAACTGAAGAGTTACATTTCCCTACTTAGCGAAAATCTGTATTTTGCTTATGCAATAATTGAAGTTGTAGTTATTCACTCGACCGTAGCAGTTTGGAAATGGAAGTTTCCATGATCAGTGACCTTCCATGAGTGGAAATTAAGTTCTTTCTTTTAACTTTCCTTTAGGTCCTGAGAGAGGAGCTTTGCTGTAGATTTGATTGTGCACAGCTTGAATCATTTACCTGAAATTTCTATTTCCTGTTTTCGATTGTTCTAAGTGTGCTCCTAGTTTTAGTCTTTTAGAGACATCCTCATTCTTTGCTATTTCTAGGTTCCATGGATTCAAACATTCAGTTTCTCTTCTTTTGCTAGTTTTCTGTTAGTACTTATGGAATGTGCATATCTTAGCATATGTAGATCATGATATATATAAAGCTGTCTGACTGCAATGGATCTTCCAGAGTAATCATACAGAACTGTTTTTATGTAGTTTTAGATATCCTTGTATGATTTAAGTTTTTTAGGTTGTAGCCTTTTCTTCTTTAAGCAATTTTTCGAGATCCTCCTATTGTTTTGTGCAACCAGGGCAATAATATTTTTCGCCTGCAGACATGGTGTGGAGAGAGGAGTCAGATTTTTGCCTACAAATATTGGTCCCTGTGATGGTCTAGGCTATAAGTTTATCTGGATCACATAAGAGAAGTATACTGAACTAGATAGAGGCTAGAGCCCCAGTCCCTTTGAAGACATCTGATAAAATTGGAACGATACATAAGTTTAGCATAGCCCCTGCACAAAGATGATATGCACAAATCAGGAAATGGTTCAAATAAAGCTTGTCATTCGCAGGTCCCTCTTATGCAGTTACCTTGAGGAGAAGTATGAGGCGAGATTATGATGTGTCATCACTGTTTAGGCCTGAATCTTCAAGTTTCTTCTTTTATCCAATTAATGAAATTCCATGATAGAGTGTGTCAAACATAAAACAACATGCGATCTAAAGAAAGAATTTTGTTCTGCAACTTGGTTGCTAAGTGTTGAAGCTTTGCAAGTTTAGCTTTTAAACATAATTGTTGGGTGGTAGGAGGACTCCTCCAACATTTGTGTTCAGGTTATCTTCATCTTCTTTCTTTTTGATTAGGACAGACTCAGCTAAGCGACCGAAAACACAGCTCATTTGTAATTACAAATGCAAGATTTTCTTGTTTATTGGTTTAGATTTTGGGTCATGGTGATAGATTCCCTGGAAAGTGTAAGTTGTTTCATTGCCGGCATCAAGAAGATGTCGCATCTGCATATTTTGGACTGTTTGGCTAGAAAGGAACAAGACACGCTTTGAGTGGAAAGGACCGCAGATTGCTAGAGTAAAAATAGATGTATCAAGTTTTTTTTTTGGTGGCTAGAGTATGTTGTAGATGCTATTACCCATCAACGACTGTGGAAATGTTGTAGCTTTGTCGTTTACTTGGTCCTGTAACATTTTGGGACCATACTAATAAAAACTTTTACCCATCAAAGAAAAAATGGAAGATGCTATTGCAGAAATATTAGATGTCAGCTCCATACCTTAGAACATTTAGGCCCGGGGAGCTAATGAGGAAAACCAAAAAAAGTGCTGAAGTAACAAAATCTAGGAAGGGAACAACATTATTCGCAGGGGTTGGAGTACTCCAACTAAAAAGATACATAAGGCATTTAGCTTTCAGAGAGTTGTTAGGAGTTGAAATGCCTAAATCCTAAACCCTGCAAAGGGAAGGACATTCTTATGAAGGATTACTAAGTGTGTTAGGATTTTATTTGTAAGTTGCAACCATAGATGAGGTGTTGTTAAAGGGTCACTTGAGGTACTATTTATCGTGAAACTAAATGAAGTCCAAGTTGGATATTTCGTCTCACTTAGGCAGCAATTTTATGAGGATTCCGAGGCACTAAGGCATAAGAGGCTCTATCTTGAAGAATGTGACACTATACAGTGAATATTGTTGGTACATTGATGTATAAATTGCTAAGAGAAGTGTTACAAATGAACATGTGTTTTATCTGGATATGAAATTAGAATTTAGTTAGAGAATTAGTGGTCATTAAATTTGAATTTCTGATTTATCTGCATGCAAATCAGAAATTTAAAATTGGTTTGGACATGATTTTCTTACTTATACTTCACTTGGTGGTGATTTTCTCAACTTGTCAAAATAATAGTTTTTTTTGTGTACCTATACTCTTTGCATCATACATACATACGTATGTTACCTCCATTTCTTCTCCGCTGAAGTCCATACCATAACTGTGCCTTGTGCTCAAAACATGCTTATTGGACCTGCTACCATCTGTGGCTAGGTTTCTAAGTTCCAGGAACTTGCTGAGATAAGGCGGAGAAGTCCTCTGGGTATCTCCTCACTCCTAGCTTGTTATACATACTGATGACTCTGGGAGATCAAGGGGTCTTTGCATTAACCTTCTGTTGTATGAGCTATGAGACTGTGTGTGCCGTCTGATAAAGAGTATTTGAAAGGCAGAAAGAATAATTTTTTCATTAGTTTGTTCTTCGCGTATTCTTTTATCTTCAAGGACTTCTTAATGCTCTGTATCATACTCAAAGTTCATCTATAGCCAACCTTCCTATCCCTTTAAAACATAAGAAATAGGAAAAAGGTATCTATAAAAAAATGAATTTCTAGATTAGAGAGGACATGGTAGATTTTCTGATTAATTTAAGTTGTTCAGACCGTTGTCCTGCTGCAGTTTTTTTAATGCCTGCCGGTGCTTCTTTGATGGAACCTTTGGTGGTTCCGGAGTGTTTAAGTTTCTTGGTTCATTTGGAATCGTATGAGTAAAAGTGTGTTCTTTAGTGGTGAAGAGAGAATGACAAATTTTTTTGATAGTTCATATCGTGTACGACTTGTTCATTTGATTAAAAATCACTATTATTTCTTGATTAATGCTGAGTGCATCCTGTTATCTGCTTTTGCTATCTCAGAAACTTAGAATAATTGGTAAGTTTGTGATGCACATCTTTAATAGTTTTACATTTTTCTCCGTGCTTAGGGATTGAGATGGTATGCCAAGCGTCTTAGAATAGATGAAGACGGAGATGTGGCAGACGAGTTCCTAGATGAGATCCCAGCAGATGCACCTTCTAGTACAGAAGAGAATAACAAGAAATTCCGTAAGTTTGAATTGAAGTACACTACAAAGCCTGCGAATGTAACAGGCCAGGCACTCTCAGCTGCAGGAAAAATTAAATATCGTGTGGAATATCAAGGCAAATTGGAGTGGATTTGAAAACTTACTATGTGTAGTCATTACATTTGAGATGAGGATTTCAGTAAAATGACTGCAGCTACGCAGCTTGCTTGATATTTTTGCTTTATTCTG</genome_strand>
        <mrna_strand>GGGCTTCTAGGGTTTTCAAAGGATGAAGGTCACGAAGTGAGAGATGAAAGTGTAGGACCTCACAATAATCTTCCTCGTAAAGGATTCAGTGTCCCTGTTCAGGTTCCTGTTTCCAGAGATCTACCTGGTCCTATCCTTGTTCAATGCAATAGAGGTGCTGGAGGCGTTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTGAGATGGTATGCCAAGCGTCTTAGAATAGATGAAGACGGAGATGTGGCAGACGAGTTCCTAGATGAGATCCCAGCAGATGCACCTTCTAGTACAGAAGAGAATAACAAGAAATTCCGTAAGTTTGAATTGAAGTACACTACAAAGCCTGCGAATGTAACAGGCCAGGCACTCTCAGCTGCAGGAAAAATTAAATATCGTGTGGAATATCAAGGCAAATTGGAGTGGATTTGAAAACTTACTATGTGTAGTCATTACATTTGAGATGAGGATTTCAGTAAAATGACTGCAGCTACGCAGCTTGCTTGATATTTTTGCTTTATTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E347157" ref_strand="+" ref_description="SGN-E347157 [cTOF-25-A6]">
      <seq>cgggttttgctttagtttggcttttatgctttttctcatagttacattactctgggcgtgaaaattttctgttgttcatccctccacgtgggaatctatcgagttcttctgctgaaggtaatgcttgttcagccacaaagttatcactttctacgcaaattttgtatgtggtcttggaggatctgacaaaaaatgatgcatacccttcagactttttatcatgatgtagtattgattatacatgtaattcgttcattagaatttcttgcatatggtattgtcttgtactgccaagcttgtgtatctttgaagtagccttcgtcatgtaatctgcaggagatgcaatcgaaactctcttgctgttcgagtaaatcagcttgtcaatgagaaaacatttcccgtctgaaatactgaattcatgctttgcagtttggtagtcataatgtgcaaagtgataatatacttatgtttaaatgttcatatggattggtgatgattatatttatagattatcttttctctttctcttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72770" stop="71537"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72470" g_stop="72339" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="132" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72338" i_stop="72235" i_length="104">
            <donor d_prob="0.848" d_score="1.00"/>
            <acceptor a_prob="0.393" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72234" g_stop="71838" g_length="397"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="529" r_length="397" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="530" polyA_stop="539"/>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E347157" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E347157" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72470" e_stop="72339"/>
          <exon e_start="72234" e_stop="71838"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGGTTTTGCTTTAGTTTGGCTTTTATGCTTTTTCTCATAGTTACATTACTCTGGGCGTGAAAATTTTCTGTTGTTCATCCCTCCACGTGGGAATCTATCGAGTTCTTCTGCTGAAGGTAATGCTTGTTCAGGTGAGCACAACTCTAATCACCATGTTTTCAGTTTTGCCATCGTCTCTTTTCATTATTGCGTTAAGGTAACTCGTAGGCTAATTTCTCTTGTATTTCATCTTCAGCCACAAAGTTATCACTTTCTACGCAAATTTTGTATGTGGTCTTGGAGGATCTGACAAAAAATGATGCATACCCTTCAGACTTTTTATCATGATGTAGTATTGATTATACATGTAATTCGTTCATTAGAATTTCTTGCATATGGTATTGTCTTGTACTGCCAAGCTTGTGTATCTTTGAAGTAGCCTTCGTCATGTAATCTGCAGGAGATGCAATCGAAACTCTCTTGCTGTTCGAGTAAATCAGCTTGTCAATGAGAAAACATTTCCCGTCTGAAATACTGAATTCATGCTTTGCAGTTTGGTAGTCATAATGTGCAAAGTGATAATATACTTATGTTTAAATGTTCATATGGATTGGTGATGATTATATTTATAGATTATCTTTTCTCTTTCTCTT</genome_strand>
        <mrna_strand>CGGGTTTTGCTTTAGTTTGGCTTTTATGCTTTTTCTCATAGTTACATTACTCTGGGCGTGAAAATTTTCTGTTGTTCATCCCTCCACGTGGGAATCTATCGAGTTCTTCTGCTGAAGGTAATGCTTGTTCAG........................................................................................................CCACAAAGTTATCACTTTCTACGCAAATTTTGTATGTGGTCTTGGAGGATCTGACAAAAAATGATGCATACCCTTCAGACTTTTTATCATGATGTAGTATTGATTATACATGTAATTCGTTCATTAGAATTTCTTGCATATGGTATTGTCTTGTACTGCCAAGCTTGTGTATCTTTGAAGTAGCCTTCGTCATGTAATCTGCAGGAGATGCAATCGAAACTCTCTTGCTGTTCGAGTAAATCAGCTTGTCAATGAGAAAACATTTCCCGTCTGAAATACTGAATTCATGCTTTGCAGTTTGGTAGTCATAATGTGCAAAGTGATAATATACTTATGTTTAAATGTTCATATGGATTGGTGATGATTATATTTATAGATTATCTTTTCTCTTTCTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E698338" ref_strand="+" ref_description="SGN-E698338 [FA06AA04]">
      <seq>cgactaagccttgctgttaaaaagttctgtaggactatatccgtgaagactctgcaagattctgatgtgaggcctctctcggtgttggaagatactttgaactatctgtgtaacttgctggactctaccgagcatccatttgaggtggttcatgacttcatctttgataggatgaggtccattagacaagatctaagtatgcaaaatatctcttgcagtcgagtggtctctatgtatgagagaatggttaaattccatataatttcccagcataaacttagaagatgtagcggttcaaatatttcttcgctgtcatacctcaacatggagcagctaacgaaggcattggcgactttatttaatctttatgaagcaaatcgtactacagcgcccatcttcaaaaatgaagctgattttttttccttttatgtgcttctccaccttgattccaaaacccaaggaacaggggagacactgtctttatggtttcgtcgcgttccttctcacattatgaagtcgacagaaatgaattttgctcggaagatcttgagatactttaaattgggcttcttcaagaaatttattcatacaacagagtccgaggcatcgtacttgcagtattgcattattgaaccttctatcaatgaggttcgatcactagctatttcctgtgtgaatcatggaggatacaagcctcagccttttcccttggtggctctttcccaactcctaatgatgaaggaatgggatgtagcatctttctgcaaagacagtggccttcaacctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="82742" stop="77620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82444" g_stop="82421" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="0.875"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82420" i_stop="80548" i_length="1873">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.742" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80547" g_stop="80326" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="246" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80325" i_stop="79132" i_length="1194">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.947" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="79131" g_stop="78913" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="465" r_length="219" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78912" i_stop="78787" i_length="126">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78786" g_stop="78701" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="551" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="78700" i_stop="78604" i_length="97">
            <donor d_prob="0.719" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="78603" g_stop="78507" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="552" r_stop="648" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="78506" i_stop="78139" i_length="368">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.765" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="78138" g_stop="78046" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="649" r_stop="741" r_length="93" r_score="0.989"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="78045" i_stop="77967" i_length="79">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="77966" g_stop="77920" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="742" r_stop="787" r_length="46" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E698338" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>788</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E698338" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82444" e_stop="82421"/>
          <exon e_start="80547" e_stop="80326"/>
          <exon e_start="79131" e_stop="78913"/>
          <exon e_start="78786" e_stop="78701"/>
          <exon e_start="78603" e_stop="78507"/>
          <exon e_start="78138" e_stop="78046"/>
          <exon e_start="77966" e_stop="77920"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACCAAGCCTTGCTGTTAAAAAGGTACTCCCTTTTTATTTGCTAGTCTATTTTTGACTTGACACAAAATTTAAGAAAATTAATAATTAACAGTTTGAATCTTGTGGTCTTTGATTAAAGATATGAAAAAATGTATCAAAATGTCATCTCATGGACTTGAACATGGAGTGTTGAAATTAAAAAGTTGCCAATAAAGTAAAGAGACATTTTCTTTAAAACAAATTGACAGAGAAAGTAATACAAAAAAATTTGAAATTAAATGAGTTGAGTAACATTTTGGTATGCTAGCACGTAGGATGAATATTTTGATTAGTTATTTCTTTACCCTGTTTGTTTGATCAACTGAATTCTAAGGATAACTAGTCTCAACTCCAGTTAATAGAAGAAGGTTTATGACCAGTGAATGATTTATGAATCTTCTGAATACTAAAATAGCCGTCGGGTACATAGATTCACGTAACTAACTCCAACTGGATTCGTATTGAGGTGTAGTTGATAGTTGATACTCTATTAATTTGTTTGATCAGCTAAACTGAACTTGCTTTATGTTTCACTTCACTAAACATTTCTAGTTCGAACCAGCTTGTCAAATATGTGGAAACAATCTAAATTGTAATAGCTCATCAAGCATTTCATATGGCCTTTTTGTGATCATCAATGTACAGTCATGGATAAAAAATAAAATGTTTTAATCTTCGCCGATAATACAGGTGATAAGTTGTGCTTGTGTTGCCATCTGGGACATAAAAGTTAACATTTAGTTTTGGACTGTCATATAACAGTTTTACGACGCTACAATGTATGAATACAATAATACACCTTGGCTAAAACTTTGTTAGACGGCAGACTAAGTGAGTCTCCAGTTTTGAGGTTCCGTAAAAGAGATGAGAAACAGCTGGATAATACGACAAATGTAAAGCAATTTAATATAAGGAAGTAGAAAAAAGTTGGTGACTTATCCGATACCAAACAATTTTCCCTACCATGCATTGACTACTTACTGCCAAATTTTTAGATATTAGTGCCAAATGGTTAATACCAACCAAGCCGAGCTCATTTTTCATCGTGGATAACAGAACATGCTTTTTCCCTGAGAGTTAGAAGGCCCTTCCTTATTAATTTTGGAGGTAGAAGGCCACCTGCTTCAACTTTCACATGTAAGAATTATTAACATTAGAGTCCGTAGCTAGAAGCATTAAATAGATACGCTACTCAATAATGTTAGAGAGGATAAAAGACCTAACAAAGTCACTTGGACAAAAGTATTTTGTGCAATAAGTTTCAAAACAAATTGGACTTATAACATTAATAAAATGCTGAGCTCTGAAGGGGTAAACAAATATAGATTGTTGAACATTCTCATTTTTATCATGTTAAAATATACCCCAGAGCAGTACTAAAGATTCCAAACAGTATTTCTTTTGCTTCGTGTGAAGACAATGGAATTTTATTTCAATGGTAAAAAAAGAATAGCATGTTCATATCTTAAAAAGTTCCCTATTTCCATTATAATGTACCAGTTCGTAAGTAACATGTTTCTTTCAAATAAAAAAGAAACCAAGATTCAATCCTATCGCAGCCAAATATTGCTGGAGTTCTATACATAATGAAGTCCATATACAAGTGAATTTTGTCCAGGCTAATTCACCCCCTTTTGTGTGTGTGGTTAAGGTTCAAACTTGATTTGATACATAATTAATACGTTTTTTTATTTACAGCATGTATGAGCAATATAAAATTAGTCAGTTTCTCTTCTACAATCTGTAGTTATATATCCAGTGTTAGTTGTCGCGAAAGTGATCTTAGATTCGGTCTACATTGCTTTTGATCTTTCCTAAATTTTATTCACAAATTCAGTCTTTGTTAAATGATGGTTTATTGAATTTCTCTTTGTTAGTTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTGCAGTCGAGTGGTCTCTATGTATGAGAGAATGGTATGCTTATTTATTCAAGTTATCTTATCCAAAAGAACTTGAATTAGAGCTGGAATGATATACATATATTTAGATGTATGAATCATGATATTGTTGCATCTGAACATCCTACGCTTCCTGAATTGCAATCTAGTTGCTCAAGTCTTCAGATCCAGTGGGAGTGAATATTTAACACTGAACCGATTGCAGAAAGCAAAAGAAAATTGATGCAGGAATTTGAGAAGCTTGTAAAATGAATTCAAAAGACGAATGGAATTGATAATAAGAAGTGGATATGCTGTTAGATGTGGATGGTGTATCCGCTACTATATACAATTCGTAAACTATTCATAGATGCAAAACGCTACCTTAACCTCTTGTCCGTGTTATCCTACTGCTATTTTCTTGCATACCGATTTCATCAGTTCCTTGTCTAATTTAGGGAACAAGAATTCTGTTGTAAATAGCTTTCGTAAGTATACACCTTTAAGGTGCTTTTGTTAATGATTTTCTTTACTTTTCCTTAAACAAAAGAAAAAAAAAGGGGGGGGGGGATTAACGAATATTACTGACTTGATTGTTCACATTACACAGTAGGGGCCCTTTATATCAGAATCCTCATCTAATACAACAAGGTAAGTGATTGCTATAGGGTAAGTATTTGTTCTCCTGCAGTGCAGATAGTATTTTAATATACTACAACATTAATTACTCTGCTTGTTCAGTTATTTTATACAATGAATCTAGACATATTGTAAATTTAGAAACATTTTACCATATAACAAACTTTTCTTGATCTAAGACATACTCCCTCTATTTCATTTTATGGGTCTTAGTTTAAGACTTCTGATTCTTGTGTCTTGAGCTAAAAGTATACGTAACATACCAAAAATATACTGACTCTTATAGTCTTAAACATGCCATTGCAACTGCAGTAGCTGATATACTTGTATCAAGGGTTACGATTCACGTAAGCATTAGGAGTTTTGGTAGAATTCTTTTGAGATGGATGTAACTTCATACCTCCTCTTTATTCGTATTACCCCCTTCTTTGTTGATCTTTTATTTGGCTGGTGTAATGAAGAGGAGGCTTCTTATATAGGAAACGTAGCAAAATTATTTAATTTAATGGATTCTAGGCTTAAAATGTTCAAGTGATCAGTTTGACTGCAGAAAGTTCAGAATTATGTAGCTTTAATATATTTTTTTCCACAGGTTAAATTCCATATAATTTCCCAGCATAAACTTAGAAGATGTAGCGGTTCAAATATTTCTTCGCTGTCATACCTCAACATGGAGCAGCTAACGAAGGCATTGGCGACTTTATTTAATCTTTATGAAGCAAATCGTACTACAGCGCCCATCTTCAAAAATGAAGCTGATTTTTTTTCCTTTTATGTGCTTCTCCACCTTGATTCCAAAACCCAAGGAACAGTTGCGTTTTTTTATATTATCGTTGTATTTATCAAAGATTGTGAGTTGCAGTTGAATATCAGGTGCTTACTCAGTGACCATTTTGTTTGTACAATTTCACTAAACATTGTACTTCTTGATTTGCAGGGGGAGACACTGTCTTTATGGTTTCGTCGCGTTCCTTCTCACATTATGAAGTCGACAGAAATGAATTTTGCTCGGAAGATCTTGAGGTAGATCAATGGCATTTTGAGTCAATTACCGTTGATAGTAGAATACATTTATTGTTGTACATGGGAAGGTCAACTTTTACTTCTTATTTTGTGGCAGATACTTTAAATTGGGCTTCTTCAAGAAATTTATTCATACAACAGAGTCCGAGGCATCGTACTTGCAGTATTGCATTATTGAACCTTCTATCAATGAGGTGAGTTCTTGTATAATAGCAAAAATTGCTCCTGTGGTATATGCTCTCTCTCATTTGCCTGACAAATATCTATTCAGCACTCCTTTCCGTCACTGTTGGAATATAATTGGGGTTTGATCCTTCTCCTACCATACGAGTCTGCTTCTTACTCGGAAGAAAACTGAAAACTGAGGCTGGTCTGTAATGGCAGACTTTAACTTATAGTGTGAAACATCCCTAGCTAATGCGAAACCAAATGCTCCATTTTTAGTGCTTTCACAAATATCTCTACTTTGTAAATATGATTCCTTTCTAACTTCTTTTATCGTTCTTTTTTTATTTTTTTGATAATTTGATTCCCCTTAATTTGTTCCATCTGCATTACTAAGGTTCGATCACTAGCTATTTCCTGTGTGAATCATGGAGGATACAAGCCTCAGCCTTTTCCCTTGGTGGCTCTTTCCAAACTCCTAATGATGAAGGTAAAATCCTAGTTTGACTAGCTGAAAAAGTTCAGCTCTTCACAATCTGGTTTGGCTGCTCTAATGTATGGTTATTCAGGAATGGGATGTAGCATCTTTCTGCAAAGACAGTGGCCTTCAAACCTC</genome_strand>
        <mrna_strand>CGACTAAGCCTTGCTGTTAAAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTGCAGTCGAGTGGTCTCTATGTATGAGAGAATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAATTCCATATAATTTCCCAGCATAAACTTAGAAGATGTAGCGGTTCAAATATTTCTTCGCTGTCATACCTCAACATGGAGCAGCTAACGAAGGCATTGGCGACTTTATTTAATCTTTATGAAGCAAATCGTACTACAGCGCCCATCTTCAAAAATGAAGCTGATTTTTTTTCCTTTTATGTGCTTCTCCACCTTGATTCCAAAACCCAAGGAACA..............................................................................................................................GGGGAGACACTGTCTTTATGGTTTCGTCGCGTTCCTTCTCACATTATGAAGTCGACAGAAATGAATTTTGCTCGGAAGATCTTGAG.................................................................................................ATACTTTAAATTGGGCTTCTTCAAGAAATTTATTCATACAACAGAGTCCGAGGCATCGTACTTGCAGTATTGCATTATTGAACCTTCTATCAATGAG................................................................................................................................................................................................................................................................................................................................................................................GTTCGATCACTAGCTATTTCCTGTGTGAATCATGGAGGATACAAGCCTCAGCCTTTTCCCTTGGTGGCTCTTTCCCAACTCCTAATGATGAAG...............................................................................GAATGGGATGTAGCATCTTTCTGCAAAGACAGTGGCCTTC-AACCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E254652" ref_strand="+" ref_description="SGN-E254652 [cLEG-29-G12]">
      <seq>agcggttcaaatatttcttcgctgtcatacctcaacatggagcagctaacgaaggcattggcgactttatttaatctttatgaagcaaatcgtactacagcgcccatcttcaaaaatgaagctgattttttttccttttatgtgcttctccaccttgattccaaaacccaaggaacaggggagacactgtctttatggtttcgtcgcgttccttctcacattatgaagtcgacagaaatgaattttgctcggaagatcttgagatactttaaattgggcttcttcaagaaatttattcatacaacagagtccgaggcatcgtacttgcagtattgcattattgaaccttctatcaatgaggttcgatcactagctatttcctgtgtgaatcatggaggatacaagcctcagccttttcccttggtggctctttccaaactcctaatgatgaaggaatgggatgtagcatctttctgcaaagac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="79389" stop="77637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79089" g_stop="78913" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78912" i_stop="78787" i_length="126">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78786" g_stop="78701" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="263" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="78700" i_stop="78604" i_length="97">
            <donor d_prob="0.719" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78603" g_stop="78507" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="360" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78506" i_stop="78139" i_length="368">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.765" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78138" g_stop="78046" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="453" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="78045" i_stop="77967" i_length="79">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="77966" g_stop="77937" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="454" r_stop="483" r_length="30" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E254652" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>483</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E254652" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79089" e_stop="78913"/>
          <exon e_start="78786" e_stop="78701"/>
          <exon e_start="78603" e_stop="78507"/>
          <exon e_start="78138" e_stop="78046"/>
          <exon e_start="77966" e_stop="77937"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCGGTTCAAATATTTCTTCGCTGTCATACCTCAACATGGAGCAGCTAACGAAGGCATTGGCGACTTTATTTAATCTTTATGAAGCAAATCGTACTACAGCGCCCATCTTCAAAAATGAAGCTGATTTTTTTTCCTTTTATGTGCTTCTCCACCTTGATTCCAAAACCCAAGGAACAGTTGCGTTTTTTTATATTATCGTTGTATTTATCAAAGATTGTGAGTTGCAGTTGAATATCAGGTGCTTACTCAGTGACCATTTTGTTTGTACAATTTCACTAAACATTGTACTTCTTGATTTGCAGGGGGAGACACTGTCTTTATGGTTTCGTCGCGTTCCTTCTCACATTATGAAGTCGACAGAAATGAATTTTGCTCGGAAGATCTTGAGGTAGATCAATGGCATTTTGAGTCAATTACCGTTGATAGTAGAATACATTTATTGTTGTACATGGGAAGGTCAACTTTTACTTCTTATTTTGTGGCAGATACTTTAAATTGGGCTTCTTCAAGAAATTTATTCATACAACAGAGTCCGAGGCATCGTACTTGCAGTATTGCATTATTGAACCTTCTATCAATGAGGTGAGTTCTTGTATAATAGCAAAAATTGCTCCTGTGGTATATGCTCTCTCTCATTTGCCTGACAAATATCTATTCAGCACTCCTTTCCGTCACTGTTGGAATATAATTGGGGTTTGATCCTTCTCCTACCATACGAGTCTGCTTCTTACTCGGAAGAAAACTGAAAACTGAGGCTGGTCTGTAATGGCAGACTTTAACTTATAGTGTGAAACATCCCTAGCTAATGCGAAACCAAATGCTCCATTTTTAGTGCTTTCACAAATATCTCTACTTTGTAAATATGATTCCTTTCTAACTTCTTTTATCGTTCTTTTTTTATTTTTTTGATAATTTGATTCCCCTTAATTTGTTCCATCTGCATTACTAAGGTTCGATCACTAGCTATTTCCTGTGTGAATCATGGAGGATACAAGCCTCAGCCTTTTCCCTTGGTGGCTCTTTCCAAACTCCTAATGATGAAGGTAAAATCCTAGTTTGACTAGCTGAAAAAGTTCAGCTCTTCACAATCTGGTTTGGCTGCTCTAATGTATGGTTATTCAGGAATGGGATGTAGCATCTTTCTGCAAAGAC</genome_strand>
        <mrna_strand>AGCGGTTCAAATATTTCTTCGCTGTCATACCTCAACATGGAGCAGCTAACGAAGGCATTGGCGACTTTATTTAATCTTTATGAAGCAAATCGTACTACAGCGCCCATCTTCAAAAATGAAGCTGATTTTTTTTCCTTTTATGTGCTTCTCCACCTTGATTCCAAAACCCAAGGAACA..............................................................................................................................GGGGAGACACTGTCTTTATGGTTTCGTCGCGTTCCTTCTCACATTATGAAGTCGACAGAAATGAATTTTGCTCGGAAGATCTTGAG.................................................................................................ATACTTTAAATTGGGCTTCTTCAAGAAATTTATTCATACAACAGAGTCCGAGGCATCGTACTTGCAGTATTGCATTATTGAACCTTCTATCAATGAG................................................................................................................................................................................................................................................................................................................................................................................GTTCGATCACTAGCTATTTCCTGTGTGAATCATGGAGGATACAAGCCTCAGCCTTTTCCCTTGGTGGCTCTTTCCAAACTCCTAATGATGAAG...............................................................................GAATGGGATGTAGCATCTTTCTGCAAAGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E255110" ref_strand="+" ref_description="SGN-E255110 [cLEG-31-F22]">
      <seq>tagcggttcaaatatttcttcgctgtcatacctcaacatggagcagctaacgaaggcattggcgactttatttaatctttatgaagcaaatcgtactacagcgcccatcttcaaaaatgaagctgattttttttccttttatgtgcttctccaccttgattccaaaacccaagggaacagngggggggagacactgtctttatggtttcgtcgcgttccttctcacattatgaagtcgacagaaatgaattttgctcggaagatcttgagatactttaaattgggcttcttcaagaaatttattcatacaacagagtccgaggcatcgtacttgcagtattgcattattgaaccttctatcaatgaggttcgatcactagctatttcctgtgtgaatcatggaggatacaagcctcagccttttcccttggtggctctttccaaactcctaatgatgaaggaatgggatgtagcatctttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="79390" stop="77645"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79090" g_stop="78908" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="184" r_length="184" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78907" i_stop="78787" i_length="121">
            <donor d_prob="0.000" d_score="0.90"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78786" g_stop="78701" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="270" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="78700" i_stop="78604" i_length="97">
            <donor d_prob="0.719" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78603" g_stop="78507" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="367" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78506" i_stop="78139" i_length="368">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.765" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78138" g_stop="78046" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="460" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="78045" i_stop="77967" i_length="79">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="77966" g_stop="77945" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="482" r_length="22" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E255110" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E255110" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79090" e_stop="78908"/>
          <exon e_start="78786" e_stop="78701"/>
          <exon e_start="78603" e_stop="78507"/>
          <exon e_start="78138" e_stop="78046"/>
          <exon e_start="77966" e_stop="77945"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCGGTTCAAATATTTCTTCGCTGTCATACCTCAACATGGAGCAGCTAACGAAGGCATTGGCGACTTTATTTAATCTTTATGAAGCAAATCGTACTACAGCGCCCATCTTCAAAAATGAAGCTGATTTTTTTTCCTTTTATGTGCTTCTCCACCTTGATTCCAAAACCCAA-GGAACAGTTGCGTTTTTTTATATTATCGTTGTATTTATCAAAGATTGTGAGTTGCAGTTGAATATCAGGTGCTTACTCAGTGACCATTTTGTTTGTACAATTTCACTAAACATTGTACTTCTTGATTTGCAGGGGGAGACACTGTCTTTATGGTTTCGTCGCGTTCCTTCTCACATTATGAAGTCGACAGAAATGAATTTTGCTCGGAAGATCTTGAGGTAGATCAATGGCATTTTGAGTCAATTACCGTTGATAGTAGAATACATTTATTGTTGTACATGGGAAGGTCAACTTTTACTTCTTATTTTGTGGCAGATACTTTAAATTGGGCTTCTTCAAGAAATTTATTCATACAACAGAGTCCGAGGCATCGTACTTGCAGTATTGCATTATTGAACCTTCTATCAATGAGGTGAGTTCTTGTATAATAGCAAAAATTGCTCCTGTGGTATATGCTCTCTCTCATTTGCCTGACAAATATCTATTCAGCACTCCTTTCCGTCACTGTTGGAATATAATTGGGGTTTGATCCTTCTCCTACCATACGAGTCTGCTTCTTACTCGGAAGAAAACTGAAAACTGAGGCTGGTCTGTAATGGCAGACTTTAACTTATAGTGTGAAACATCCCTAGCTAATGCGAAACCAAATGCTCCATTTTTAGTGCTTTCACAAATATCTCTACTTTGTAAATATGATTCCTTTCTAACTTCTTTTATCGTTCTTTTTTTATTTTTTTGATAATTTGATTCCCCTTAATTTGTTCCATCTGCATTACTAAGGTTCGATCACTAGCTATTTCCTGTGTGAATCATGGAGGATACAAGCCTCAGCCTTTTCCCTTGGTGGCTCTTTCCAAACTCCTAATGATGAAGGTAAAATCCTAGTTTGACTAGCTGAAAAAGTTCAGCTCTTCACAATCTGGTTTGGCTGCTCTAATGTATGGTTATTCAGGAATGGGATGTAGCATCTTTCT</genome_strand>
        <mrna_strand>TAGCGGTTCAAATATTTCTTCGCTGTCATACCTCAACATGGAGCAGCTAACGAAGGCATTGGCGACTTTATTTAATCTTTATGAAGCAAATCGTACTACAGCGCCCATCTTCAAAAATGAAGCTGATTTTTTTTCCTTTTATGTGCTTCTCCACCTTGATTCCAAAACCCAAGGGAACAGNGGG.........................................................................................................................GGGGAGACACTGTCTTTATGGTTTCGTCGCGTTCCTTCTCACATTATGAAGTCGACAGAAATGAATTTTGCTCGGAAGATCTTGAG.................................................................................................ATACTTTAAATTGGGCTTCTTCAAGAAATTTATTCATACAACAGAGTCCGAGGCATCGTACTTGCAGTATTGCATTATTGAACCTTCTATCAATGAG................................................................................................................................................................................................................................................................................................................................................................................GTTCGATCACTAGCTATTTCCTGTGTGAATCATGGAGGATACAAGCCTCAGCCTTTTCCCTTGGTGGCTCTTTCCAAACTCCTAATGATGAAG...............................................................................GAATGGGATGTAGCATCTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E274337" ref_strand="+" ref_description="SGN-E274337 [cLEN-15-F17]">
      <seq>agccttgctgttaaaaagttctgtaggactatatccgtgaagactctgcaagattctgatgtgaggcctctctcggtgttggaagatactttgaactatctgtgtaacttgctggactctaccgagcatccatttgaggtggttcatgacttcatctttgataggatgaggtccattagacaagatctaagtatgcaaaatatctcttgcagtcgagtggtctctatgtatgagagaatggttaaattccatataatttcccagcataaacttagaagatgtagcggttcaaatatttcttcgctgtcatacctcaacatggagcagctaacgaaggcattggcgactttatttaatctttatgaagcaaatcgtactacagcgcccatcttcaaaaatgaagctgattttttttccttttatgtgcttctccaccttgattccaaaacccaaggaacaggggagacactgtctttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="82738" stop="78468"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82438" g_stop="82421" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="18" r_length="18" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82420" i_stop="80548" i_length="1873">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.742" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80547" g_stop="80326" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="240" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80325" i_stop="79132" i_length="1194">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.947" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="79131" g_stop="78913" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="241" r_stop="459" r_length="219" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78912" i_stop="78787" i_length="126">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78786" g_stop="78768" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="478" r_length="19" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E274337" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E274337" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82438" e_stop="82421"/>
          <exon e_start="80547" e_stop="80326"/>
          <exon e_start="79131" e_stop="78913"/>
          <exon e_start="78786" e_stop="78768"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCCTTGCTGTTAAAAAGGTACTCCCTTTTTATTTGCTAGTCTATTTTTGACTTGACACAAAATTTAAGAAAATTAATAATTAACAGTTTGAATCTTGTGGTCTTTGATTAAAGATATGAAAAAATGTATCAAAATGTCATCTCATGGACTTGAACATGGAGTGTTGAAATTAAAAAGTTGCCAATAAAGTAAAGAGACATTTTCTTTAAAACAAATTGACAGAGAAAGTAATACAAAAAAATTTGAAATTAAATGAGTTGAGTAACATTTTGGTATGCTAGCACGTAGGATGAATATTTTGATTAGTTATTTCTTTACCCTGTTTGTTTGATCAACTGAATTCTAAGGATAACTAGTCTCAACTCCAGTTAATAGAAGAAGGTTTATGACCAGTGAATGATTTATGAATCTTCTGAATACTAAAATAGCCGTCGGGTACATAGATTCACGTAACTAACTCCAACTGGATTCGTATTGAGGTGTAGTTGATAGTTGATACTCTATTAATTTGTTTGATCAGCTAAACTGAACTTGCTTTATGTTTCACTTCACTAAACATTTCTAGTTCGAACCAGCTTGTCAAATATGTGGAAACAATCTAAATTGTAATAGCTCATCAAGCATTTCATATGGCCTTTTTGTGATCATCAATGTACAGTCATGGATAAAAAATAAAATGTTTTAATCTTCGCCGATAATACAGGTGATAAGTTGTGCTTGTGTTGCCATCTGGGACATAAAAGTTAACATTTAGTTTTGGACTGTCATATAACAGTTTTACGACGCTACAATGTATGAATACAATAATACACCTTGGCTAAAACTTTGTTAGACGGCAGACTAAGTGAGTCTCCAGTTTTGAGGTTCCGTAAAAGAGATGAGAAACAGCTGGATAATACGACAAATGTAAAGCAATTTAATATAAGGAAGTAGAAAAAAGTTGGTGACTTATCCGATACCAAACAATTTTCCCTACCATGCATTGACTACTTACTGCCAAATTTTTAGATATTAGTGCCAAATGGTTAATACCAACCAAGCCGAGCTCATTTTTCATCGTGGATAACAGAACATGCTTTTTCCCTGAGAGTTAGAAGGCCCTTCCTTATTAATTTTGGAGGTAGAAGGCCACCTGCTTCAACTTTCACATGTAAGAATTATTAACATTAGAGTCCGTAGCTAGAAGCATTAAATAGATACGCTACTCAATAATGTTAGAGAGGATAAAAGACCTAACAAAGTCACTTGGACAAAAGTATTTTGTGCAATAAGTTTCAAAACAAATTGGACTTATAACATTAATAAAATGCTGAGCTCTGAAGGGGTAAACAAATATAGATTGTTGAACATTCTCATTTTTATCATGTTAAAATATACCCCAGAGCAGTACTAAAGATTCCAAACAGTATTTCTTTTGCTTCGTGTGAAGACAATGGAATTTTATTTCAATGGTAAAAAAAGAATAGCATGTTCATATCTTAAAAAGTTCCCTATTTCCATTATAATGTACCAGTTCGTAAGTAACATGTTTCTTTCAAATAAAAAAGAAACCAAGATTCAATCCTATCGCAGCCAAATATTGCTGGAGTTCTATACATAATGAAGTCCATATACAAGTGAATTTTGTCCAGGCTAATTCACCCCCTTTTGTGTGTGTGGTTAAGGTTCAAACTTGATTTGATACATAATTAATACGTTTTTTTATTTACAGCATGTATGAGCAATATAAAATTAGTCAGTTTCTCTTCTACAATCTGTAGTTATATATCCAGTGTTAGTTGTCGCGAAAGTGATCTTAGATTCGGTCTACATTGCTTTTGATCTTTCCTAAATTTTATTCACAAATTCAGTCTTTGTTAAATGATGGTTTATTGAATTTCTCTTTGTTAGTTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTGCAGTCGAGTGGTCTCTATGTATGAGAGAATGGTATGCTTATTTATTCAAGTTATCTTATCCAAAAGAACTTGAATTAGAGCTGGAATGATATACATATATTTAGATGTATGAATCATGATATTGTTGCATCTGAACATCCTACGCTTCCTGAATTGCAATCTAGTTGCTCAAGTCTTCAGATCCAGTGGGAGTGAATATTTAACACTGAACCGATTGCAGAAAGCAAAAGAAAATTGATGCAGGAATTTGAGAAGCTTGTAAAATGAATTCAAAAGACGAATGGAATTGATAATAAGAAGTGGATATGCTGTTAGATGTGGATGGTGTATCCGCTACTATATACAATTCGTAAACTATTCATAGATGCAAAACGCTACCTTAACCTCTTGTCCGTGTTATCCTACTGCTATTTTCTTGCATACCGATTTCATCAGTTCCTTGTCTAATTTAGGGAACAAGAATTCTGTTGTAAATAGCTTTCGTAAGTATACACCTTTAAGGTGCTTTTGTTAATGATTTTCTTTACTTTTCCTTAAACAAAAGAAAAAAAAAGGGGGGGGGGGATTAACGAATATTACTGACTTGATTGTTCACATTACACAGTAGGGGCCCTTTATATCAGAATCCTCATCTAATACAACAAGGTAAGTGATTGCTATAGGGTAAGTATTTGTTCTCCTGCAGTGCAGATAGTATTTTAATATACTACAACATTAATTACTCTGCTTGTTCAGTTATTTTATACAATGAATCTAGACATATTGTAAATTTAGAAACATTTTACCATATAACAAACTTTTCTTGATCTAAGACATACTCCCTCTATTTCATTTTATGGGTCTTAGTTTAAGACTTCTGATTCTTGTGTCTTGAGCTAAAAGTATACGTAACATACCAAAAATATACTGACTCTTATAGTCTTAAACATGCCATTGCAACTGCAGTAGCTGATATACTTGTATCAAGGGTTACGATTCACGTAAGCATTAGGAGTTTTGGTAGAATTCTTTTGAGATGGATGTAACTTCATACCTCCTCTTTATTCGTATTACCCCCTTCTTTGTTGATCTTTTATTTGGCTGGTGTAATGAAGAGGAGGCTTCTTATATAGGAAACGTAGCAAAATTATTTAATTTAATGGATTCTAGGCTTAAAATGTTCAAGTGATCAGTTTGACTGCAGAAAGTTCAGAATTATGTAGCTTTAATATATTTTTTTCCACAGGTTAAATTCCATATAATTTCCCAGCATAAACTTAGAAGATGTAGCGGTTCAAATATTTCTTCGCTGTCATACCTCAACATGGAGCAGCTAACGAAGGCATTGGCGACTTTATTTAATCTTTATGAAGCAAATCGTACTACAGCGCCCATCTTCAAAAATGAAGCTGATTTTTTTTCCTTTTATGTGCTTCTCCACCTTGATTCCAAAACCCAAGGAACAGTTGCGTTTTTTTATATTATCGTTGTATTTATCAAAGATTGTGAGTTGCAGTTGAATATCAGGTGCTTACTCAGTGACCATTTTGTTTGTACAATTTCACTAAACATTGTACTTCTTGATTTGCAGGGGGAGACACTGTCTTTAT</genome_strand>
        <mrna_strand>AGCCTTGCTGTTAAAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTGCAGTCGAGTGGTCTCTATGTATGAGAGAATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAATTCCATATAATTTCCCAGCATAAACTTAGAAGATGTAGCGGTTCAAATATTTCTTCGCTGTCATACCTCAACATGGAGCAGCTAACGAAGGCATTGGCGACTTTATTTAATCTTTATGAAGCAAATCGTACTACAGCGCCCATCTTCAAAAATGAAGCTGATTTTTTTTCCTTTTATGTGCTTCTCCACCTTGATTCCAAAACCCAAGGAACA..............................................................................................................................GGGGAGACACTGTCTTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E245539" ref_strand="+" ref_description="SGN-E245539 [cLEF-43-J6]">
      <seq>ttgacgacattcagagtttagttggaacttgccctttcatgtgtcctgttgaggagagggagaaaagagagaggctgcgagacttagctgtgtttgagaggctacatggaaatcctcgacagtcatcaccaagccttgctgttaaaaagttctgtaggactatatccgtgaagactctgcaagattctgatgtgaggcctctctcggtgttggaagatactttgaactatctgtgtaacttgctggactctaccgagcatccatttgaggtggttcatgacttcatctttgataggatgaggtccattagacaagatctaagtatgcaaaatatctcttgcagtcgagtggtctctatgtatgagagaatggttaaattccatataatttcccagcataaacttagaagatgtagcggttcaaatatttcttcgctgtcatacctcaacatggagcagctaacgaaggcattggcgactttatttaatctttatgaagcaaatcgtactacagcgcccatcttcaaaaatgaagctgattttttttccttttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="83069" stop="78649"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82769" g_stop="82722" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82721" i_stop="82522" i_length="200">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82521" g_stop="82421" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="149" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82420" i_stop="80548" i_length="1873">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.742" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80547" g_stop="80326" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="371" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80325" i_stop="79132" i_length="1194">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.947" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79131" g_stop="78949" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="554" r_length="183" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E245539" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245539" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82769" e_stop="82722"/>
          <exon e_start="82521" e_stop="82421"/>
          <exon e_start="80547" e_stop="80326"/>
          <exon e_start="79131" e_stop="78949"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTGGTACACCAATTCTCCTCTATTTTCCTTTATGGACTGCTTTTTTTAAAGTGCGCTAAAATGGAAGTAAACCAATAAATGCATAAACAATCAATTTGAAGTAAACTCTAGAAGGAGGTACTTCTACTGCCTTTAAATCCTGGAGCGTGTGAACCTGCAATATTAAATAAGTTTAGTGTTTTTTCTTTAAAAAAAAATTGCAGTTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAGGTACTCCCTTTTTATTTGCTAGTCTATTTTTGACTTGACACAAAATTTAAGAAAATTAATAATTAACAGTTTGAATCTTGTGGTCTTTGATTAAAGATATGAAAAAATGTATCAAAATGTCATCTCATGGACTTGAACATGGAGTGTTGAAATTAAAAAGTTGCCAATAAAGTAAAGAGACATTTTCTTTAAAACAAATTGACAGAGAAAGTAATACAAAAAAATTTGAAATTAAATGAGTTGAGTAACATTTTGGTATGCTAGCACGTAGGATGAATATTTTGATTAGTTATTTCTTTACCCTGTTTGTTTGATCAACTGAATTCTAAGGATAACTAGTCTCAACTCCAGTTAATAGAAGAAGGTTTATGACCAGTGAATGATTTATGAATCTTCTGAATACTAAAATAGCCGTCGGGTACATAGATTCACGTAACTAACTCCAACTGGATTCGTATTGAGGTGTAGTTGATAGTTGATACTCTATTAATTTGTTTGATCAGCTAAACTGAACTTGCTTTATGTTTCACTTCACTAAACATTTCTAGTTCGAACCAGCTTGTCAAATATGTGGAAACAATCTAAATTGTAATAGCTCATCAAGCATTTCATATGGCCTTTTTGTGATCATCAATGTACAGTCATGGATAAAAAATAAAATGTTTTAATCTTCGCCGATAATACAGGTGATAAGTTGTGCTTGTGTTGCCATCTGGGACATAAAAGTTAACATTTAGTTTTGGACTGTCATATAACAGTTTTACGACGCTACAATGTATGAATACAATAATACACCTTGGCTAAAACTTTGTTAGACGGCAGACTAAGTGAGTCTCCAGTTTTGAGGTTCCGTAAAAGAGATGAGAAACAGCTGGATAATACGACAAATGTAAAGCAATTTAATATAAGGAAGTAGAAAAAAGTTGGTGACTTATCCGATACCAAACAATTTTCCCTACCATGCATTGACTACTTACTGCCAAATTTTTAGATATTAGTGCCAAATGGTTAATACCAACCAAGCCGAGCTCATTTTTCATCGTGGATAACAGAACATGCTTTTTCCCTGAGAGTTAGAAGGCCCTTCCTTATTAATTTTGGAGGTAGAAGGCCACCTGCTTCAACTTTCACATGTAAGAATTATTAACATTAGAGTCCGTAGCTAGAAGCATTAAATAGATACGCTACTCAATAATGTTAGAGAGGATAAAAGACCTAACAAAGTCACTTGGACAAAAGTATTTTGTGCAATAAGTTTCAAAACAAATTGGACTTATAACATTAATAAAATGCTGAGCTCTGAAGGGGTAAACAAATATAGATTGTTGAACATTCTCATTTTTATCATGTTAAAATATACCCCAGAGCAGTACTAAAGATTCCAAACAGTATTTCTTTTGCTTCGTGTGAAGACAATGGAATTTTATTTCAATGGTAAAAAAAGAATAGCATGTTCATATCTTAAAAAGTTCCCTATTTCCATTATAATGTACCAGTTCGTAAGTAACATGTTTCTTTCAAATAAAAAAGAAACCAAGATTCAATCCTATCGCAGCCAAATATTGCTGGAGTTCTATACATAATGAAGTCCATATACAAGTGAATTTTGTCCAGGCTAATTCACCCCCTTTTGTGTGTGTGGTTAAGGTTCAAACTTGATTTGATACATAATTAATACGTTTTTTTATTTACAGCATGTATGAGCAATATAAAATTAGTCAGTTTCTCTTCTACAATCTGTAGTTATATATCCAGTGTTAGTTGTCGCGAAAGTGATCTTAGATTCGGTCTACATTGCTTTTGATCTTTCCTAAATTTTATTCACAAATTCAGTCTTTGTTAAATGATGGTTTATTGAATTTCTCTTTGTTAGTTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTGCAGTCGAGTGGTCTCTATGTATGAGAGAATGGTATGCTTATTTATTCAAGTTATCTTATCCAAAAGAACTTGAATTAGAGCTGGAATGATATACATATATTTAGATGTATGAATCATGATATTGTTGCATCTGAACATCCTACGCTTCCTGAATTGCAATCTAGTTGCTCAAGTCTTCAGATCCAGTGGGAGTGAATATTTAACACTGAACCGATTGCAGAAAGCAAAAGAAAATTGATGCAGGAATTTGAGAAGCTTGTAAAATGAATTCAAAAGACGAATGGAATTGATAATAAGAAGTGGATATGCTGTTAGATGTGGATGGTGTATCCGCTACTATATACAATTCGTAAACTATTCATAGATGCAAAACGCTACCTTAACCTCTTGTCCGTGTTATCCTACTGCTATTTTCTTGCATACCGATTTCATCAGTTCCTTGTCTAATTTAGGGAACAAGAATTCTGTTGTAAATAGCTTTCGTAAGTATACACCTTTAAGGTGCTTTTGTTAATGATTTTCTTTACTTTTCCTTAAACAAAAGAAAAAAAAAGGGGGGGGGGGATTAACGAATATTACTGACTTGATTGTTCACATTACACAGTAGGGGCCCTTTATATCAGAATCCTCATCTAATACAACAAGGTAAGTGATTGCTATAGGGTAAGTATTTGTTCTCCTGCAGTGCAGATAGTATTTTAATATACTACAACATTAATTACTCTGCTTGTTCAGTTATTTTATACAATGAATCTAGACATATTGTAAATTTAGAAACATTTTACCATATAACAAACTTTTCTTGATCTAAGACATACTCCCTCTATTTCATTTTATGGGTCTTAGTTTAAGACTTCTGATTCTTGTGTCTTGAGCTAAAAGTATACGTAACATACCAAAAATATACTGACTCTTATAGTCTTAAACATGCCATTGCAACTGCAGTAGCTGATATACTTGTATCAAGGGTTACGATTCACGTAAGCATTAGGAGTTTTGGTAGAATTCTTTTGAGATGGATGTAACTTCATACCTCCTCTTTATTCGTATTACCCCCTTCTTTGTTGATCTTTTATTTGGCTGGTGTAATGAAGAGGAGGCTTCTTATATAGGAAACGTAGCAAAATTATTTAATTTAATGGATTCTAGGCTTAAAATGTTCAAGTGATCAGTTTGACTGCAGAAAGTTCAGAATTATGTAGCTTTAATATATTTTTTTCCACAGGTTAAATTCCATATAATTTCCCAGCATAAACTTAGAAGATGTAGCGGTTCAAATATTTCTTCGCTGTCATACCTCAACATGGAGCAGCTAACGAAGGCATTGGCGACTTTATTTAATCTTTATGAAGCAAATCGTACTACAGCGCCCATCTTCAAAAATGAAGCTGATTTTTTTTCCTTTTAT</genome_strand>
        <mrna_strand>TTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTG........................................................................................................................................................................................................TTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTGCAGTCGAGTGGTCTCTATGTATGAGAGAATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAATTCCATATAATTTCCCAGCATAAACTTAGAAGATGTAGCGGTTCAAATATTTCTTCGCTGTCATACCTCAACATGGAGCAGCTAACGAAGGCATTGGCGACTTTATTTAATCTTTATGAAGCAAATCGTACTACAGCGCCCATCTTCAAAAATGAAGCTGATTTTTTTTCCTTTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E368254" ref_strand="+" ref_description="SGN-E368254 [TUS-26-O12]">
      <seq>atggccggaaggagtcaacctccgtacaggccaagacctaatttttcctcttcttcttccagatcctaccacccttctcaaccttcccgcaactttcagtcccaccacaccaaaaatttcaattcttctacgcctaatggtaccccaattcagaacaacgcttccgacaacaagacgagctcaagcaattgggacaaagtcattgatgaagatattgacgacattcagagtttagttggaacttgccctttcatgtgtcctgttgaggagagggagaaaagagagaggctgcgagacttagctgtgtttgagaggctacatggaaatcctcgacagtcatcaccaagccttgctgttaaaaagttctgtaggactatatccgtgaagactctgcaagattctgatgtgaggcctctctcggtgttggaagatactttgaactatctgtgtaacttgctggactctaccgagcatccatttgaggtggttcatgacttcatctttgataggatgaggtccattagacaagatctaagtatgcaaaatatctcttgcagtcgagtggtctctatgtatgagagaatggttaaattccatataatttcccagcataaacttagaagatgtagcggttcaaatatttcttcgctgtcatacctcaacatggagcagctaacgaaggcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="83283" stop="78732"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82983" g_stop="82722" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="262" r_length="262" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82721" i_stop="82522" i_length="200">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82521" g_stop="82421" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="363" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82420" i_stop="80548" i_length="1873">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.742" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80547" g_stop="80326" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="585" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80325" i_stop="79132" i_length="1194">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.947" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79131" g_stop="79032" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="586" r_stop="685" r_length="100" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E368254" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>685</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E368254" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82983" e_stop="82722"/>
          <exon e_start="82521" e_stop="82421"/>
          <exon e_start="80547" e_stop="80326"/>
          <exon e_start="79131" e_stop="79032"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTGGTACACCAATTCTCCTCTATTTTCCTTTATGGACTGCTTTTTTTAAAGTGCGCTAAAATGGAAGTAAACCAATAAATGCATAAACAATCAATTTGAAGTAAACTCTAGAAGGAGGTACTTCTACTGCCTTTAAATCCTGGAGCGTGTGAACCTGCAATATTAAATAAGTTTAGTGTTTTTTCTTTAAAAAAAAATTGCAGTTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAGGTACTCCCTTTTTATTTGCTAGTCTATTTTTGACTTGACACAAAATTTAAGAAAATTAATAATTAACAGTTTGAATCTTGTGGTCTTTGATTAAAGATATGAAAAAATGTATCAAAATGTCATCTCATGGACTTGAACATGGAGTGTTGAAATTAAAAAGTTGCCAATAAAGTAAAGAGACATTTTCTTTAAAACAAATTGACAGAGAAAGTAATACAAAAAAATTTGAAATTAAATGAGTTGAGTAACATTTTGGTATGCTAGCACGTAGGATGAATATTTTGATTAGTTATTTCTTTACCCTGTTTGTTTGATCAACTGAATTCTAAGGATAACTAGTCTCAACTCCAGTTAATAGAAGAAGGTTTATGACCAGTGAATGATTTATGAATCTTCTGAATACTAAAATAGCCGTCGGGTACATAGATTCACGTAACTAACTCCAACTGGATTCGTATTGAGGTGTAGTTGATAGTTGATACTCTATTAATTTGTTTGATCAGCTAAACTGAACTTGCTTTATGTTTCACTTCACTAAACATTTCTAGTTCGAACCAGCTTGTCAAATATGTGGAAACAATCTAAATTGTAATAGCTCATCAAGCATTTCATATGGCCTTTTTGTGATCATCAATGTACAGTCATGGATAAAAAATAAAATGTTTTAATCTTCGCCGATAATACAGGTGATAAGTTGTGCTTGTGTTGCCATCTGGGACATAAAAGTTAACATTTAGTTTTGGACTGTCATATAACAGTTTTACGACGCTACAATGTATGAATACAATAATACACCTTGGCTAAAACTTTGTTAGACGGCAGACTAAGTGAGTCTCCAGTTTTGAGGTTCCGTAAAAGAGATGAGAAACAGCTGGATAATACGACAAATGTAAAGCAATTTAATATAAGGAAGTAGAAAAAAGTTGGTGACTTATCCGATACCAAACAATTTTCCCTACCATGCATTGACTACTTACTGCCAAATTTTTAGATATTAGTGCCAAATGGTTAATACCAACCAAGCCGAGCTCATTTTTCATCGTGGATAACAGAACATGCTTTTTCCCTGAGAGTTAGAAGGCCCTTCCTTATTAATTTTGGAGGTAGAAGGCCACCTGCTTCAACTTTCACATGTAAGAATTATTAACATTAGAGTCCGTAGCTAGAAGCATTAAATAGATACGCTACTCAATAATGTTAGAGAGGATAAAAGACCTAACAAAGTCACTTGGACAAAAGTATTTTGTGCAATAAGTTTCAAAACAAATTGGACTTATAACATTAATAAAATGCTGAGCTCTGAAGGGGTAAACAAATATAGATTGTTGAACATTCTCATTTTTATCATGTTAAAATATACCCCAGAGCAGTACTAAAGATTCCAAACAGTATTTCTTTTGCTTCGTGTGAAGACAATGGAATTTTATTTCAATGGTAAAAAAAGAATAGCATGTTCATATCTTAAAAAGTTCCCTATTTCCATTATAATGTACCAGTTCGTAAGTAACATGTTTCTTTCAAATAAAAAAGAAACCAAGATTCAATCCTATCGCAGCCAAATATTGCTGGAGTTCTATACATAATGAAGTCCATATACAAGTGAATTTTGTCCAGGCTAATTCACCCCCTTTTGTGTGTGTGGTTAAGGTTCAAACTTGATTTGATACATAATTAATACGTTTTTTTATTTACAGCATGTATGAGCAATATAAAATTAGTCAGTTTCTCTTCTACAATCTGTAGTTATATATCCAGTGTTAGTTGTCGCGAAAGTGATCTTAGATTCGGTCTACATTGCTTTTGATCTTTCCTAAATTTTATTCACAAATTCAGTCTTTGTTAAATGATGGTTTATTGAATTTCTCTTTGTTAGTTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTGCAGTCGAGTGGTCTCTATGTATGAGAGAATGGTATGCTTATTTATTCAAGTTATCTTATCCAAAAGAACTTGAATTAGAGCTGGAATGATATACATATATTTAGATGTATGAATCATGATATTGTTGCATCTGAACATCCTACGCTTCCTGAATTGCAATCTAGTTGCTCAAGTCTTCAGATCCAGTGGGAGTGAATATTTAACACTGAACCGATTGCAGAAAGCAAAAGAAAATTGATGCAGGAATTTGAGAAGCTTGTAAAATGAATTCAAAAGACGAATGGAATTGATAATAAGAAGTGGATATGCTGTTAGATGTGGATGGTGTATCCGCTACTATATACAATTCGTAAACTATTCATAGATGCAAAACGCTACCTTAACCTCTTGTCCGTGTTATCCTACTGCTATTTTCTTGCATACCGATTTCATCAGTTCCTTGTCTAATTTAGGGAACAAGAATTCTGTTGTAAATAGCTTTCGTAAGTATACACCTTTAAGGTGCTTTTGTTAATGATTTTCTTTACTTTTCCTTAAACAAAAGAAAAAAAAAGGGGGGGGGGGATTAACGAATATTACTGACTTGATTGTTCACATTACACAGTAGGGGCCCTTTATATCAGAATCCTCATCTAATACAACAAGGTAAGTGATTGCTATAGGGTAAGTATTTGTTCTCCTGCAGTGCAGATAGTATTTTAATATACTACAACATTAATTACTCTGCTTGTTCAGTTATTTTATACAATGAATCTAGACATATTGTAAATTTAGAAACATTTTACCATATAACAAACTTTTCTTGATCTAAGACATACTCCCTCTATTTCATTTTATGGGTCTTAGTTTAAGACTTCTGATTCTTGTGTCTTGAGCTAAAAGTATACGTAACATACCAAAAATATACTGACTCTTATAGTCTTAAACATGCCATTGCAACTGCAGTAGCTGATATACTTGTATCAAGGGTTACGATTCACGTAAGCATTAGGAGTTTTGGTAGAATTCTTTTGAGATGGATGTAACTTCATACCTCCTCTTTATTCGTATTACCCCCTTCTTTGTTGATCTTTTATTTGGCTGGTGTAATGAAGAGGAGGCTTCTTATATAGGAAACGTAGCAAAATTATTTAATTTAATGGATTCTAGGCTTAAAATGTTCAAGTGATCAGTTTGACTGCAGAAAGTTCAGAATTATGTAGCTTTAATATATTTTTTTCCACAGGTTAAATTCCATATAATTTCCCAGCATAAACTTAGAAGATGTAGCGGTTCAAATATTTCTTCGCTGTCATACCTCAACATGGAGCAGCTAACGAAGGCAT</genome_strand>
        <mrna_strand>ATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTG........................................................................................................................................................................................................TTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTGCAGTCGAGTGGTCTCTATGTATGAGAGAATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAATTCCATATAATTTCCCAGCATAAACTTAGAAGATGTAGCGGTTCAAATATTTCTTCGCTGTCATACCTCAACATGGAGCAGCTAACGAAGGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E212913" ref_strand="+" ref_description="SGN-E212913 [cLEC-73-B18]">
      <seq>gacgccgagccatggccggaaggagtcaacctccgtacaggccaagacctaatttttcctcttcttcttccagatcctaccacccttctcaaccttcccgcaactttcagtcccaccacaccaaaaatttcaattcttctacgcctaatggtaccccaattcagaacaacgcttccgacaacaagacgagctcaagcaattgggacaaagtcattgatgaagatattgacgacattcagagtttagttggaacttgccctttcatgtgtcctgttgaggagagggagaaaagagagaggctgcgagacttagctgtgtttgagaggctacatggaaatcctcgacagtcatcaccaagccttgctgttaaaaagttctgtaggactatatccgtgaagactctgcaagattctgatgtgaggcctctctcggtgttggaagatactttgaactatctgtgtaacttgctggactctaccgagcatccatttgaggtggttcatgacttcatctttgataggatgaggtccattagacaagatctaagtatgcaaaatatctcttgcagtcgagtggtctctatgtatgagagaatggttannattcatataatttcccagcataaacttagaagatgtagcgggntcaatatttcttcgctgtcatacctcaacatggagcagctaacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="83294" stop="78739"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82994" g_stop="82722" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82721" i_stop="82522" i_length="200">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82521" g_stop="82421" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="374" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82420" i_stop="80548" i_length="1873">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.742" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80547" g_stop="80326" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="596" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80325" i_stop="79132" i_length="1194">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.947" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79131" g_stop="79039" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="597" r_stop="689" r_length="93" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E212913" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>689</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E212913" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82994" e_stop="82722"/>
          <exon e_start="82521" e_stop="82421"/>
          <exon e_start="80547" e_stop="80326"/>
          <exon e_start="79131" e_stop="79039"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACGCCGAGCCATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTGGTACACCAATTCTCCTCTATTTTCCTTTATGGACTGCTTTTTTTAAAGTGCGCTAAAATGGAAGTAAACCAATAAATGCATAAACAATCAATTTGAAGTAAACTCTAGAAGGAGGTACTTCTACTGCCTTTAAATCCTGGAGCGTGTGAACCTGCAATATTAAATAAGTTTAGTGTTTTTTCTTTAAAAAAAAATTGCAGTTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAGGTACTCCCTTTTTATTTGCTAGTCTATTTTTGACTTGACACAAAATTTAAGAAAATTAATAATTAACAGTTTGAATCTTGTGGTCTTTGATTAAAGATATGAAAAAATGTATCAAAATGTCATCTCATGGACTTGAACATGGAGTGTTGAAATTAAAAAGTTGCCAATAAAGTAAAGAGACATTTTCTTTAAAACAAATTGACAGAGAAAGTAATACAAAAAAATTTGAAATTAAATGAGTTGAGTAACATTTTGGTATGCTAGCACGTAGGATGAATATTTTGATTAGTTATTTCTTTACCCTGTTTGTTTGATCAACTGAATTCTAAGGATAACTAGTCTCAACTCCAGTTAATAGAAGAAGGTTTATGACCAGTGAATGATTTATGAATCTTCTGAATACTAAAATAGCCGTCGGGTACATAGATTCACGTAACTAACTCCAACTGGATTCGTATTGAGGTGTAGTTGATAGTTGATACTCTATTAATTTGTTTGATCAGCTAAACTGAACTTGCTTTATGTTTCACTTCACTAAACATTTCTAGTTCGAACCAGCTTGTCAAATATGTGGAAACAATCTAAATTGTAATAGCTCATCAAGCATTTCATATGGCCTTTTTGTGATCATCAATGTACAGTCATGGATAAAAAATAAAATGTTTTAATCTTCGCCGATAATACAGGTGATAAGTTGTGCTTGTGTTGCCATCTGGGACATAAAAGTTAACATTTAGTTTTGGACTGTCATATAACAGTTTTACGACGCTACAATGTATGAATACAATAATACACCTTGGCTAAAACTTTGTTAGACGGCAGACTAAGTGAGTCTCCAGTTTTGAGGTTCCGTAAAAGAGATGAGAAACAGCTGGATAATACGACAAATGTAAAGCAATTTAATATAAGGAAGTAGAAAAAAGTTGGTGACTTATCCGATACCAAACAATTTTCCCTACCATGCATTGACTACTTACTGCCAAATTTTTAGATATTAGTGCCAAATGGTTAATACCAACCAAGCCGAGCTCATTTTTCATCGTGGATAACAGAACATGCTTTTTCCCTGAGAGTTAGAAGGCCCTTCCTTATTAATTTTGGAGGTAGAAGGCCACCTGCTTCAACTTTCACATGTAAGAATTATTAACATTAGAGTCCGTAGCTAGAAGCATTAAATAGATACGCTACTCAATAATGTTAGAGAGGATAAAAGACCTAACAAAGTCACTTGGACAAAAGTATTTTGTGCAATAAGTTTCAAAACAAATTGGACTTATAACATTAATAAAATGCTGAGCTCTGAAGGGGTAAACAAATATAGATTGTTGAACATTCTCATTTTTATCATGTTAAAATATACCCCAGAGCAGTACTAAAGATTCCAAACAGTATTTCTTTTGCTTCGTGTGAAGACAATGGAATTTTATTTCAATGGTAAAAAAAGAATAGCATGTTCATATCTTAAAAAGTTCCCTATTTCCATTATAATGTACCAGTTCGTAAGTAACATGTTTCTTTCAAATAAAAAAGAAACCAAGATTCAATCCTATCGCAGCCAAATATTGCTGGAGTTCTATACATAATGAAGTCCATATACAAGTGAATTTTGTCCAGGCTAATTCACCCCCTTTTGTGTGTGTGGTTAAGGTTCAAACTTGATTTGATACATAATTAATACGTTTTTTTATTTACAGCATGTATGAGCAATATAAAATTAGTCAGTTTCTCTTCTACAATCTGTAGTTATATATCCAGTGTTAGTTGTCGCGAAAGTGATCTTAGATTCGGTCTACATTGCTTTTGATCTTTCCTAAATTTTATTCACAAATTCAGTCTTTGTTAAATGATGGTTTATTGAATTTCTCTTTGTTAGTTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTGCAGTCGAGTGGTCTCTATGTATGAGAGAATGGTATGCTTATTTATTCAAGTTATCTTATCCAAAAGAACTTGAATTAGAGCTGGAATGATATACATATATTTAGATGTATGAATCATGATATTGTTGCATCTGAACATCCTACGCTTCCTGAATTGCAATCTAGTTGCTCAAGTCTTCAGATCCAGTGGGAGTGAATATTTAACACTGAACCGATTGCAGAAAGCAAAAGAAAATTGATGCAGGAATTTGAGAAGCTTGTAAAATGAATTCAAAAGACGAATGGAATTGATAATAAGAAGTGGATATGCTGTTAGATGTGGATGGTGTATCCGCTACTATATACAATTCGTAAACTATTCATAGATGCAAAACGCTACCTTAACCTCTTGTCCGTGTTATCCTACTGCTATTTTCTTGCATACCGATTTCATCAGTTCCTTGTCTAATTTAGGGAACAAGAATTCTGTTGTAAATAGCTTTCGTAAGTATACACCTTTAAGGTGCTTTTGTTAATGATTTTCTTTACTTTTCCTTAAACAAAAGAAAAAAAAAGGGGGGGGGGGATTAACGAATATTACTGACTTGATTGTTCACATTACACAGTAGGGGCCCTTTATATCAGAATCCTCATCTAATACAACAAGGTAAGTGATTGCTATAGGGTAAGTATTTGTTCTCCTGCAGTGCAGATAGTATTTTAATATACTACAACATTAATTACTCTGCTTGTTCAGTTATTTTATACAATGAATCTAGACATATTGTAAATTTAGAAACATTTTACCATATAACAAACTTTTCTTGATCTAAGACATACTCCCTCTATTTCATTTTATGGGTCTTAGTTTAAGACTTCTGATTCTTGTGTCTTGAGCTAAAAGTATACGTAACATACCAAAAATATACTGACTCTTATAGTCTTAAACATGCCATTGCAACTGCAGTAGCTGATATACTTGTATCAAGGGTTACGATTCACGTAAGCATTAGGAGTTTTGGTAGAATTCTTTTGAGATGGATGTAACTTCATACCTCCTCTTTATTCGTATTACCCCCTTCTTTGTTGATCTTTTATTTGGCTGGTGTAATGAAGAGGAGGCTTCTTATATAGGAAACGTAGCAAAATTATTTAATTTAATGGATTCTAGGCTTAAAATGTTCAAGTGATCAGTTTGACTGCAGAAAGTTCAGAATTATGTAGCTTTAATATATTTTTTTCCACAGGTTAAATTCCATATAATTTCCCAGCATAAACTTAGAAGATGTAGCGGTTCAAATATTTCTTCGCTGTCATACCTCAACATGGAGCAGCTAACG</genome_strand>
        <mrna_strand>GACGCCGAGCCATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTG........................................................................................................................................................................................................TTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTGCAGTCGAGTGGTCTCTATGTATGAGAGAATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTANNATTCATATAATTTCCCAGCATAAACTTAGAAGATGTAGCGGGNTCAATATTTCTTCGCTGTCATACCTCAACATGGAGCAGCTAACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E368405" ref_strand="+" ref_description="SGN-E368405 [TUS-23-P11]">
      <seq>atggccggaaggagtcaacctccgtacaggccaagacctaatttttcctcttcttcttccagatcctaccacccttctcaaccttcccgcaactttcagtcccaccacaccaaaaatttcaattcttctacgcctaatggtaccccaattcagaacaacgcttccgacaacaagacgagctcaagcaattgggacaaagtcattgatgaagatattgacgacattcagagtttagttggaacttgccctttcatgtgtcctgttgaggagagggagaaaagagagaggctgcgagacttagctgtgtttgagaggctacatggaaatcctcgacagtcatcaccaagccttgctgttaaaaagttctgtaggactatatccgtgaagactctgcaagattctgatgtgaggcctctctcggtgttggaagatactttgaactatctgtgtaacttgctggactctaccgagcatccatttgaggtggttcatgacttcatctttgataggatgaggtccattagacaagatctaagtatgcaaaatatctcttgcagtcgagtggtctctatgtatgagagaatggttaaattccatataatttcccagcataaacttagaagatgtagcggttcaaatatttcttcgctgtcatacctcaacatggagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="83283" stop="78747"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82983" g_stop="82722" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="262" r_length="262" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82721" i_stop="82522" i_length="200">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82521" g_stop="82421" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="363" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82420" i_stop="80548" i_length="1873">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.742" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80547" g_stop="80326" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="585" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80325" i_stop="79132" i_length="1194">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.947" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79131" g_stop="79047" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="586" r_stop="670" r_length="85" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E368405" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>670</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E368405" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82983" e_stop="82722"/>
          <exon e_start="82521" e_stop="82421"/>
          <exon e_start="80547" e_stop="80326"/>
          <exon e_start="79131" e_stop="79047"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTGGTACACCAATTCTCCTCTATTTTCCTTTATGGACTGCTTTTTTTAAAGTGCGCTAAAATGGAAGTAAACCAATAAATGCATAAACAATCAATTTGAAGTAAACTCTAGAAGGAGGTACTTCTACTGCCTTTAAATCCTGGAGCGTGTGAACCTGCAATATTAAATAAGTTTAGTGTTTTTTCTTTAAAAAAAAATTGCAGTTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAGGTACTCCCTTTTTATTTGCTAGTCTATTTTTGACTTGACACAAAATTTAAGAAAATTAATAATTAACAGTTTGAATCTTGTGGTCTTTGATTAAAGATATGAAAAAATGTATCAAAATGTCATCTCATGGACTTGAACATGGAGTGTTGAAATTAAAAAGTTGCCAATAAAGTAAAGAGACATTTTCTTTAAAACAAATTGACAGAGAAAGTAATACAAAAAAATTTGAAATTAAATGAGTTGAGTAACATTTTGGTATGCTAGCACGTAGGATGAATATTTTGATTAGTTATTTCTTTACCCTGTTTGTTTGATCAACTGAATTCTAAGGATAACTAGTCTCAACTCCAGTTAATAGAAGAAGGTTTATGACCAGTGAATGATTTATGAATCTTCTGAATACTAAAATAGCCGTCGGGTACATAGATTCACGTAACTAACTCCAACTGGATTCGTATTGAGGTGTAGTTGATAGTTGATACTCTATTAATTTGTTTGATCAGCTAAACTGAACTTGCTTTATGTTTCACTTCACTAAACATTTCTAGTTCGAACCAGCTTGTCAAATATGTGGAAACAATCTAAATTGTAATAGCTCATCAAGCATTTCATATGGCCTTTTTGTGATCATCAATGTACAGTCATGGATAAAAAATAAAATGTTTTAATCTTCGCCGATAATACAGGTGATAAGTTGTGCTTGTGTTGCCATCTGGGACATAAAAGTTAACATTTAGTTTTGGACTGTCATATAACAGTTTTACGACGCTACAATGTATGAATACAATAATACACCTTGGCTAAAACTTTGTTAGACGGCAGACTAAGTGAGTCTCCAGTTTTGAGGTTCCGTAAAAGAGATGAGAAACAGCTGGATAATACGACAAATGTAAAGCAATTTAATATAAGGAAGTAGAAAAAAGTTGGTGACTTATCCGATACCAAACAATTTTCCCTACCATGCATTGACTACTTACTGCCAAATTTTTAGATATTAGTGCCAAATGGTTAATACCAACCAAGCCGAGCTCATTTTTCATCGTGGATAACAGAACATGCTTTTTCCCTGAGAGTTAGAAGGCCCTTCCTTATTAATTTTGGAGGTAGAAGGCCACCTGCTTCAACTTTCACATGTAAGAATTATTAACATTAGAGTCCGTAGCTAGAAGCATTAAATAGATACGCTACTCAATAATGTTAGAGAGGATAAAAGACCTAACAAAGTCACTTGGACAAAAGTATTTTGTGCAATAAGTTTCAAAACAAATTGGACTTATAACATTAATAAAATGCTGAGCTCTGAAGGGGTAAACAAATATAGATTGTTGAACATTCTCATTTTTATCATGTTAAAATATACCCCAGAGCAGTACTAAAGATTCCAAACAGTATTTCTTTTGCTTCGTGTGAAGACAATGGAATTTTATTTCAATGGTAAAAAAAGAATAGCATGTTCATATCTTAAAAAGTTCCCTATTTCCATTATAATGTACCAGTTCGTAAGTAACATGTTTCTTTCAAATAAAAAAGAAACCAAGATTCAATCCTATCGCAGCCAAATATTGCTGGAGTTCTATACATAATGAAGTCCATATACAAGTGAATTTTGTCCAGGCTAATTCACCCCCTTTTGTGTGTGTGGTTAAGGTTCAAACTTGATTTGATACATAATTAATACGTTTTTTTATTTACAGCATGTATGAGCAATATAAAATTAGTCAGTTTCTCTTCTACAATCTGTAGTTATATATCCAGTGTTAGTTGTCGCGAAAGTGATCTTAGATTCGGTCTACATTGCTTTTGATCTTTCCTAAATTTTATTCACAAATTCAGTCTTTGTTAAATGATGGTTTATTGAATTTCTCTTTGTTAGTTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTGCAGTCGAGTGGTCTCTATGTATGAGAGAATGGTATGCTTATTTATTCAAGTTATCTTATCCAAAAGAACTTGAATTAGAGCTGGAATGATATACATATATTTAGATGTATGAATCATGATATTGTTGCATCTGAACATCCTACGCTTCCTGAATTGCAATCTAGTTGCTCAAGTCTTCAGATCCAGTGGGAGTGAATATTTAACACTGAACCGATTGCAGAAAGCAAAAGAAAATTGATGCAGGAATTTGAGAAGCTTGTAAAATGAATTCAAAAGACGAATGGAATTGATAATAAGAAGTGGATATGCTGTTAGATGTGGATGGTGTATCCGCTACTATATACAATTCGTAAACTATTCATAGATGCAAAACGCTACCTTAACCTCTTGTCCGTGTTATCCTACTGCTATTTTCTTGCATACCGATTTCATCAGTTCCTTGTCTAATTTAGGGAACAAGAATTCTGTTGTAAATAGCTTTCGTAAGTATACACCTTTAAGGTGCTTTTGTTAATGATTTTCTTTACTTTTCCTTAAACAAAAGAAAAAAAAAGGGGGGGGGGGATTAACGAATATTACTGACTTGATTGTTCACATTACACAGTAGGGGCCCTTTATATCAGAATCCTCATCTAATACAACAAGGTAAGTGATTGCTATAGGGTAAGTATTTGTTCTCCTGCAGTGCAGATAGTATTTTAATATACTACAACATTAATTACTCTGCTTGTTCAGTTATTTTATACAATGAATCTAGACATATTGTAAATTTAGAAACATTTTACCATATAACAAACTTTTCTTGATCTAAGACATACTCCCTCTATTTCATTTTATGGGTCTTAGTTTAAGACTTCTGATTCTTGTGTCTTGAGCTAAAAGTATACGTAACATACCAAAAATATACTGACTCTTATAGTCTTAAACATGCCATTGCAACTGCAGTAGCTGATATACTTGTATCAAGGGTTACGATTCACGTAAGCATTAGGAGTTTTGGTAGAATTCTTTTGAGATGGATGTAACTTCATACCTCCTCTTTATTCGTATTACCCCCTTCTTTGTTGATCTTTTATTTGGCTGGTGTAATGAAGAGGAGGCTTCTTATATAGGAAACGTAGCAAAATTATTTAATTTAATGGATTCTAGGCTTAAAATGTTCAAGTGATCAGTTTGACTGCAGAAAGTTCAGAATTATGTAGCTTTAATATATTTTTTTCCACAGGTTAAATTCCATATAATTTCCCAGCATAAACTTAGAAGATGTAGCGGTTCAAATATTTCTTCGCTGTCATACCTCAACATGGAGC</genome_strand>
        <mrna_strand>ATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTG........................................................................................................................................................................................................TTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTGCAGTCGAGTGGTCTCTATGTATGAGAGAATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAATTCCATATAATTTCCCAGCATAAACTTAGAAGATGTAGCGGTTCAAATATTTCTTCGCTGTCATACCTCAACATGGAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E468661" ref_strand="+" ref_description="SGN-E468661 [cSTB-5-D5]">
      <seq>ctcgttcttctttttccgatcagctagtgaagtagacgccgagccatggccggaaggagtcaacctccgtacaggccaagacccaatttttcctcttcttcttccagatccttccatccttctcaaccttcccgcaactctcagtcccaccacaccaaaaatgtcatttcttctacgcctaatactacccaaattgagaacaacgcttccgacaagaagacgagctcaagcagttgggataaatccattgatgaagatattgatgacattcagaatttacttggaacttgccctttcatgtgtcctgttgaggagagggaaaagcgagagaggctgcgagacttagctgtgtttgagaggctacatggaaatcctcgtcaatcatcaccaagccttgctgttaaaaagaactatatccgtaaagactttgcaagattctgatgtgaggcctctctcggtgttggaagatactttgaactatctgtgtaacttgctggactctaccgagcctccctttgaggtggttcatgacttcatctttgatagaatgaggtccattagacaagatctaagtatgcaaaatatctcttgcagtcgagtggtctctatgtatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="83330" stop="80034"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83030" g_stop="82722" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="307" r_length="307" r_score="0.932"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82721" i_stop="82522" i_length="200">
            <donor d_prob="0.968" d_score="0.94"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82521" g_stop="82421" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="408" r_length="101" r_score="0.950"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82420" i_stop="80540" i_length="1881">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80539" g_stop="80334" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="614" r_length="206" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E468661" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>616</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E468661" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83030" e_stop="82722"/>
          <exon e_start="82521" e_stop="82421"/>
          <exon e_start="80539" e_stop="80334"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTCTTCTTTTTGCCGATCAGCCAGTGAAAGTAGACGCCGAGCCATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTGGTACACCAATTCTCCTCTATTTTCCTTTATGGACTGCTTTTTTTAAAGTGCGCTAAAATGGAAGTAAACCAATAAATGCATAAACAATCAATTTGAAGTAAACTCTAGAAGGAGGTACTTCTACTGCCTTTAAATCCTGGAGCGTGTGAACCTGCAATATTAAATAAGTTTAGTGTTTTTTCTTTAAAAAAAAATTGCAGTTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAGGTACTCCCTTTTTATTTGCTAGTCTATTTTTGACTTGACACAAAATTTAAGAAAATTAATAATTAACAGTTTGAATCTTGTGGTCTTTGATTAAAGATATGAAAAAATGTATCAAAATGTCATCTCATGGACTTGAACATGGAGTGTTGAAATTAAAAAGTTGCCAATAAAGTAAAGAGACATTTTCTTTAAAACAAATTGACAGAGAAAGTAATACAAAAAAATTTGAAATTAAATGAGTTGAGTAACATTTTGGTATGCTAGCACGTAGGATGAATATTTTGATTAGTTATTTCTTTACCCTGTTTGTTTGATCAACTGAATTCTAAGGATAACTAGTCTCAACTCCAGTTAATAGAAGAAGGTTTATGACCAGTGAATGATTTATGAATCTTCTGAATACTAAAATAGCCGTCGGGTACATAGATTCACGTAACTAACTCCAACTGGATTCGTATTGAGGTGTAGTTGATAGTTGATACTCTATTAATTTGTTTGATCAGCTAAACTGAACTTGCTTTATGTTTCACTTCACTAAACATTTCTAGTTCGAACCAGCTTGTCAAATATGTGGAAACAATCTAAATTGTAATAGCTCATCAAGCATTTCATATGGCCTTTTTGTGATCATCAATGTACAGTCATGGATAAAAAATAAAATGTTTTAATCTTCGCCGATAATACAGGTGATAAGTTGTGCTTGTGTTGCCATCTGGGACATAAAAGTTAACATTTAGTTTTGGACTGTCATATAACAGTTTTACGACGCTACAATGTATGAATACAATAATACACCTTGGCTAAAACTTTGTTAGACGGCAGACTAAGTGAGTCTCCAGTTTTGAGGTTCCGTAAAAGAGATGAGAAACAGCTGGATAATACGACAAATGTAAAGCAATTTAATATAAGGAAGTAGAAAAAAGTTGGTGACTTATCCGATACCAAACAATTTTCCCTACCATGCATTGACTACTTACTGCCAAATTTTTAGATATTAGTGCCAAATGGTTAATACCAACCAAGCCGAGCTCATTTTTCATCGTGGATAACAGAACATGCTTTTTCCCTGAGAGTTAGAAGGCCCTTCCTTATTAATTTTGGAGGTAGAAGGCCACCTGCTTCAACTTTCACATGTAAGAATTATTAACATTAGAGTCCGTAGCTAGAAGCATTAAATAGATACGCTACTCAATAATGTTAGAGAGGATAAAAGACCTAACAAAGTCACTTGGACAAAAGTATTTTGTGCAATAAGTTTCAAAACAAATTGGACTTATAACATTAATAAAATGCTGAGCTCTGAAGGGGTAAACAAATATAGATTGTTGAACATTCTCATTTTTATCATGTTAAAATATACCCCAGAGCAGTACTAAAGATTCCAAACAGTATTTCTTTTGCTTCGTGTGAAGACAATGGAATTTTATTTCAATGGTAAAAAAAGAATAGCATGTTCATATCTTAAAAAGTTCCCTATTTCCATTATAATGTACCAGTTCGTAAGTAACATGTTTCTTTCAAATAAAAAAGAAACCAAGATTCAATCCTATCGCAGCCAAATATTGCTGGAGTTCTATACATAATGAAGTCCATATACAAGTGAATTTTGTCCAGGCTAATTCACCCCCTTTTGTGTGTGTGGTTAAGGTTCAAACTTGATTTGATACATAATTAATACGTTTTTTTATTTACAGCATGTATGAGCAATATAAAATTAGTCAGTTTCTCTTCTACAATCTGTAGTTATATATCCAGTGTTAGTTGTCGCGAAAGTGATCTTAGATTCGGTCTACATTGCTTTTGATCTTTCCTAAATTTTATTCACAAATTCAGTCTTTGTTAAATGATGGTTTATTGAATTTCTCTTTGTTAGTTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTGCAGTCGAGTGGTCTCTATGTATG</genome_strand>
        <mrna_strand>CTCGTTCTTCTTTTT-CCGATCAGCTAGTG-AAGTAGACGCCGAGCCATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCCAATTTTTCCTCTTCTTCTTCCAGATCCTTCCATCCTTCTCAACCTTCCCGCAACTCTCAGTCCCACCACACCAAAAATGTCATTTCTTCTACGCCTAATACTACCCAAATTGAGAACAACGCTTCCGACAAGAAGACGAGCTCAAGCAGTTGGGATAAATCCATTGATGAAGATATTGATGACATTCAGAATTTACTTGGAACTTGCCCTTTCATGTGTCCTG........................................................................................................................................................................................................TTGAGGAGAGGGAAAAGCGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGTCAATCATCACCAAGCCTTGCTGTTAAAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTATATCCGTAAAGACTTTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCCTCCCTTTGAGGTGGTTCATGACTTCATCTTTGATAGAATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTGCAGTCGAGTGGTCTCTATGTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E272895" ref_strand="+" ref_description="SGN-E272895 [cLEM-25-J9]">
      <seq>gaaagtagacgccgagccatggccggaaggagtcaacctccgtacaggccaagacctaatttttcctcttcttcttccagatcctaccacccttctcaaccttcccgcaactttcagtcccaccacaccaaaaatttcaattcttctacgcctaatggtaccccaattcagaacaacgcttccgacaacaagacgagctcaagcaattgggacaaagtcattgatgaagatattgacgacattcagagtttagttggaacttgccctttcatgtgtcctgttgaggagagggagaaaagagagaggctgcgagacttagctgtgtttgagaggctacatggaaatcctcgacagtcatcaccaagccttgctgttaaaaagttctgtaggactatatccgtgaagactctgcaagattctgatgtgaggcctctctcggtgttggaagatactttgaactatctgtgtaacttgctggactctaccgagcatccatttgaggtggttcatgacttcatctttgataggatgaggtccattagacaagatctaagtatgcaaaatatctcttgcagtcgagtggtctctatgtatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="83301" stop="80034"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83001" g_stop="82722" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="280" r_length="280" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82721" i_stop="82522" i_length="200">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82521" g_stop="82421" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="381" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82420" i_stop="80548" i_length="1873">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.742" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80547" g_stop="80334" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="595" r_length="214" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E272895" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>595</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E272895" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83001" e_stop="82722"/>
          <exon e_start="82521" e_stop="82421"/>
          <exon e_start="80547" e_stop="80334"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGTAGACGCCGAGCCATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTGGTACACCAATTCTCCTCTATTTTCCTTTATGGACTGCTTTTTTTAAAGTGCGCTAAAATGGAAGTAAACCAATAAATGCATAAACAATCAATTTGAAGTAAACTCTAGAAGGAGGTACTTCTACTGCCTTTAAATCCTGGAGCGTGTGAACCTGCAATATTAAATAAGTTTAGTGTTTTTTCTTTAAAAAAAAATTGCAGTTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAGGTACTCCCTTTTTATTTGCTAGTCTATTTTTGACTTGACACAAAATTTAAGAAAATTAATAATTAACAGTTTGAATCTTGTGGTCTTTGATTAAAGATATGAAAAAATGTATCAAAATGTCATCTCATGGACTTGAACATGGAGTGTTGAAATTAAAAAGTTGCCAATAAAGTAAAGAGACATTTTCTTTAAAACAAATTGACAGAGAAAGTAATACAAAAAAATTTGAAATTAAATGAGTTGAGTAACATTTTGGTATGCTAGCACGTAGGATGAATATTTTGATTAGTTATTTCTTTACCCTGTTTGTTTGATCAACTGAATTCTAAGGATAACTAGTCTCAACTCCAGTTAATAGAAGAAGGTTTATGACCAGTGAATGATTTATGAATCTTCTGAATACTAAAATAGCCGTCGGGTACATAGATTCACGTAACTAACTCCAACTGGATTCGTATTGAGGTGTAGTTGATAGTTGATACTCTATTAATTTGTTTGATCAGCTAAACTGAACTTGCTTTATGTTTCACTTCACTAAACATTTCTAGTTCGAACCAGCTTGTCAAATATGTGGAAACAATCTAAATTGTAATAGCTCATCAAGCATTTCATATGGCCTTTTTGTGATCATCAATGTACAGTCATGGATAAAAAATAAAATGTTTTAATCTTCGCCGATAATACAGGTGATAAGTTGTGCTTGTGTTGCCATCTGGGACATAAAAGTTAACATTTAGTTTTGGACTGTCATATAACAGTTTTACGACGCTACAATGTATGAATACAATAATACACCTTGGCTAAAACTTTGTTAGACGGCAGACTAAGTGAGTCTCCAGTTTTGAGGTTCCGTAAAAGAGATGAGAAACAGCTGGATAATACGACAAATGTAAAGCAATTTAATATAAGGAAGTAGAAAAAAGTTGGTGACTTATCCGATACCAAACAATTTTCCCTACCATGCATTGACTACTTACTGCCAAATTTTTAGATATTAGTGCCAAATGGTTAATACCAACCAAGCCGAGCTCATTTTTCATCGTGGATAACAGAACATGCTTTTTCCCTGAGAGTTAGAAGGCCCTTCCTTATTAATTTTGGAGGTAGAAGGCCACCTGCTTCAACTTTCACATGTAAGAATTATTAACATTAGAGTCCGTAGCTAGAAGCATTAAATAGATACGCTACTCAATAATGTTAGAGAGGATAAAAGACCTAACAAAGTCACTTGGACAAAAGTATTTTGTGCAATAAGTTTCAAAACAAATTGGACTTATAACATTAATAAAATGCTGAGCTCTGAAGGGGTAAACAAATATAGATTGTTGAACATTCTCATTTTTATCATGTTAAAATATACCCCAGAGCAGTACTAAAGATTCCAAACAGTATTTCTTTTGCTTCGTGTGAAGACAATGGAATTTTATTTCAATGGTAAAAAAAGAATAGCATGTTCATATCTTAAAAAGTTCCCTATTTCCATTATAATGTACCAGTTCGTAAGTAACATGTTTCTTTCAAATAAAAAAGAAACCAAGATTCAATCCTATCGCAGCCAAATATTGCTGGAGTTCTATACATAATGAAGTCCATATACAAGTGAATTTTGTCCAGGCTAATTCACCCCCTTTTGTGTGTGTGGTTAAGGTTCAAACTTGATTTGATACATAATTAATACGTTTTTTTATTTACAGCATGTATGAGCAATATAAAATTAGTCAGTTTCTCTTCTACAATCTGTAGTTATATATCCAGTGTTAGTTGTCGCGAAAGTGATCTTAGATTCGGTCTACATTGCTTTTGATCTTTCCTAAATTTTATTCACAAATTCAGTCTTTGTTAAATGATGGTTTATTGAATTTCTCTTTGTTAGTTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTGCAGTCGAGTGGTCTCTATGTATG</genome_strand>
        <mrna_strand>GAAAGTAGACGCCGAGCCATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTG........................................................................................................................................................................................................TTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTGCAGTCGAGTGGTCTCTATGTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E246966" ref_strand="+" ref_description="SGN-E246966 [cLEF-41-I11]">
      <seq>atggccggaaggagtcaacctccgtacaggccaagacctaatttttcctcttcttcttccagatcctaccacccttctcaaccttcccgcaactttcagtcccaccacaccaaaaatttcaattcttctacgcctaatggtaccccaattcagaacaacgcttccgacaacaagacgagctcaagcaattgggacaaagtcattgatgaagatattgacgacattcagagtttagttggaacttgccctttcatgtgtcctgttgaggagagggagaaaagagagaggctgcgagacttagctgtgtttgagaggctacatggaaatcctcgacagtcatcaccaagccttgctgttaaaaagttctgtaggactatatccgtgaagactctgcaagattctgatgtgaggcctctctcggtgttggaagatactttgaactatctgtgtaacttgctggactctaccgagcatccatttgaggtggttcatgacttcatctttgataggatgaggtccattagacaagatctaagtatgcaaaatatctcttgcagtcgagtggtctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="83283" stop="80042"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82983" g_stop="82722" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="262" r_length="262" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82721" i_stop="82522" i_length="200">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82521" g_stop="82421" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="363" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82420" i_stop="80548" i_length="1873">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.742" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80547" g_stop="80342" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="569" r_length="206" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E246966" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246966" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82983" e_stop="82722"/>
          <exon e_start="82521" e_stop="82421"/>
          <exon e_start="80547" e_stop="80342"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTGGTACACCAATTCTCCTCTATTTTCCTTTATGGACTGCTTTTTTTAAAGTGCGCTAAAATGGAAGTAAACCAATAAATGCATAAACAATCAATTTGAAGTAAACTCTAGAAGGAGGTACTTCTACTGCCTTTAAATCCTGGAGCGTGTGAACCTGCAATATTAAATAAGTTTAGTGTTTTTTCTTTAAAAAAAAATTGCAGTTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAGGTACTCCCTTTTTATTTGCTAGTCTATTTTTGACTTGACACAAAATTTAAGAAAATTAATAATTAACAGTTTGAATCTTGTGGTCTTTGATTAAAGATATGAAAAAATGTATCAAAATGTCATCTCATGGACTTGAACATGGAGTGTTGAAATTAAAAAGTTGCCAATAAAGTAAAGAGACATTTTCTTTAAAACAAATTGACAGAGAAAGTAATACAAAAAAATTTGAAATTAAATGAGTTGAGTAACATTTTGGTATGCTAGCACGTAGGATGAATATTTTGATTAGTTATTTCTTTACCCTGTTTGTTTGATCAACTGAATTCTAAGGATAACTAGTCTCAACTCCAGTTAATAGAAGAAGGTTTATGACCAGTGAATGATTTATGAATCTTCTGAATACTAAAATAGCCGTCGGGTACATAGATTCACGTAACTAACTCCAACTGGATTCGTATTGAGGTGTAGTTGATAGTTGATACTCTATTAATTTGTTTGATCAGCTAAACTGAACTTGCTTTATGTTTCACTTCACTAAACATTTCTAGTTCGAACCAGCTTGTCAAATATGTGGAAACAATCTAAATTGTAATAGCTCATCAAGCATTTCATATGGCCTTTTTGTGATCATCAATGTACAGTCATGGATAAAAAATAAAATGTTTTAATCTTCGCCGATAATACAGGTGATAAGTTGTGCTTGTGTTGCCATCTGGGACATAAAAGTTAACATTTAGTTTTGGACTGTCATATAACAGTTTTACGACGCTACAATGTATGAATACAATAATACACCTTGGCTAAAACTTTGTTAGACGGCAGACTAAGTGAGTCTCCAGTTTTGAGGTTCCGTAAAAGAGATGAGAAACAGCTGGATAATACGACAAATGTAAAGCAATTTAATATAAGGAAGTAGAAAAAAGTTGGTGACTTATCCGATACCAAACAATTTTCCCTACCATGCATTGACTACTTACTGCCAAATTTTTAGATATTAGTGCCAAATGGTTAATACCAACCAAGCCGAGCTCATTTTTCATCGTGGATAACAGAACATGCTTTTTCCCTGAGAGTTAGAAGGCCCTTCCTTATTAATTTTGGAGGTAGAAGGCCACCTGCTTCAACTTTCACATGTAAGAATTATTAACATTAGAGTCCGTAGCTAGAAGCATTAAATAGATACGCTACTCAATAATGTTAGAGAGGATAAAAGACCTAACAAAGTCACTTGGACAAAAGTATTTTGTGCAATAAGTTTCAAAACAAATTGGACTTATAACATTAATAAAATGCTGAGCTCTGAAGGGGTAAACAAATATAGATTGTTGAACATTCTCATTTTTATCATGTTAAAATATACCCCAGAGCAGTACTAAAGATTCCAAACAGTATTTCTTTTGCTTCGTGTGAAGACAATGGAATTTTATTTCAATGGTAAAAAAAGAATAGCATGTTCATATCTTAAAAAGTTCCCTATTTCCATTATAATGTACCAGTTCGTAAGTAACATGTTTCTTTCAAATAAAAAAGAAACCAAGATTCAATCCTATCGCAGCCAAATATTGCTGGAGTTCTATACATAATGAAGTCCATATACAAGTGAATTTTGTCCAGGCTAATTCACCCCCTTTTGTGTGTGTGGTTAAGGTTCAAACTTGATTTGATACATAATTAATACGTTTTTTTATTTACAGCATGTATGAGCAATATAAAATTAGTCAGTTTCTCTTCTACAATCTGTAGTTATATATCCAGTGTTAGTTGTCGCGAAAGTGATCTTAGATTCGGTCTACATTGCTTTTGATCTTTCCTAAATTTTATTCACAAATTCAGTCTTTGTTAAATGATGGTTTATTGAATTTCTCTTTGTTAGTTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTGCAGTCGAGTGGTCTC</genome_strand>
        <mrna_strand>ATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTG........................................................................................................................................................................................................TTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTGCAGTCGAGTGGTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E417469" ref_strand="+" ref_description="SGN-E417469 [STM-25-B17]">
      <seq>cgagttcttctttttccgatcagctagtgaagtagacgccgagccatggccggaaggagtcaacctccgtacaggccaagacccaatttttcctcttcttcttccagatccttccatccttctcaaccttcccgcaactctcagtcccaccacaccaaaaatgtcaatttttctacgcctaatagtacccaaattgagaacaacgcttccgacaagaagacgagctcaagcagttgggataaatccattgatgaagatattgatgacattcagaatttagttggaacttgccctttcatgtgtcctgttgaggagagggaaaagcgagagaggctgcgagacttagctgtgtttgagaggctacatggaaatcctcgtcaatcatcaccaagccttgctgttaaaaagttctgcagaactatatccgtaaagactttgcaagattctgatgtgaggcctctctcggtgttggaagatactttgaactatctgtgtaacttgctggactctactgagcatccctttgaggtggttcatgacttcatctttgataggatgaggtccattagacaagatctaagtatgcaaaatatctcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="83327" stop="80057"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83030" g_stop="82722" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="307" r_length="307" r_score="0.932"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82721" i_stop="82522" i_length="200">
            <donor d_prob="0.968" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82521" g_stop="82421" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="408" r_length="101" r_score="0.950"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82420" i_stop="80548" i_length="1873">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.742" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80547" g_stop="80357" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="599" r_length="191" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E417469" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E417469" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83030" e_stop="82722"/>
          <exon e_start="82521" e_stop="82421"/>
          <exon e_start="80547" e_stop="80357"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTCTTCTTTTTGCCGATCAGCCAGTGAAAGTAGACGCCGAGCCATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTGGTACACCAATTCTCCTCTATTTTCCTTTATGGACTGCTTTTTTTAAAGTGCGCTAAAATGGAAGTAAACCAATAAATGCATAAACAATCAATTTGAAGTAAACTCTAGAAGGAGGTACTTCTACTGCCTTTAAATCCTGGAGCGTGTGAACCTGCAATATTAAATAAGTTTAGTGTTTTTTCTTTAAAAAAAAATTGCAGTTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAGGTACTCCCTTTTTATTTGCTAGTCTATTTTTGACTTGACACAAAATTTAAGAAAATTAATAATTAACAGTTTGAATCTTGTGGTCTTTGATTAAAGATATGAAAAAATGTATCAAAATGTCATCTCATGGACTTGAACATGGAGTGTTGAAATTAAAAAGTTGCCAATAAAGTAAAGAGACATTTTCTTTAAAACAAATTGACAGAGAAAGTAATACAAAAAAATTTGAAATTAAATGAGTTGAGTAACATTTTGGTATGCTAGCACGTAGGATGAATATTTTGATTAGTTATTTCTTTACCCTGTTTGTTTGATCAACTGAATTCTAAGGATAACTAGTCTCAACTCCAGTTAATAGAAGAAGGTTTATGACCAGTGAATGATTTATGAATCTTCTGAATACTAAAATAGCCGTCGGGTACATAGATTCACGTAACTAACTCCAACTGGATTCGTATTGAGGTGTAGTTGATAGTTGATACTCTATTAATTTGTTTGATCAGCTAAACTGAACTTGCTTTATGTTTCACTTCACTAAACATTTCTAGTTCGAACCAGCTTGTCAAATATGTGGAAACAATCTAAATTGTAATAGCTCATCAAGCATTTCATATGGCCTTTTTGTGATCATCAATGTACAGTCATGGATAAAAAATAAAATGTTTTAATCTTCGCCGATAATACAGGTGATAAGTTGTGCTTGTGTTGCCATCTGGGACATAAAAGTTAACATTTAGTTTTGGACTGTCATATAACAGTTTTACGACGCTACAATGTATGAATACAATAATACACCTTGGCTAAAACTTTGTTAGACGGCAGACTAAGTGAGTCTCCAGTTTTGAGGTTCCGTAAAAGAGATGAGAAACAGCTGGATAATACGACAAATGTAAAGCAATTTAATATAAGGAAGTAGAAAAAAGTTGGTGACTTATCCGATACCAAACAATTTTCCCTACCATGCATTGACTACTTACTGCCAAATTTTTAGATATTAGTGCCAAATGGTTAATACCAACCAAGCCGAGCTCATTTTTCATCGTGGATAACAGAACATGCTTTTTCCCTGAGAGTTAGAAGGCCCTTCCTTATTAATTTTGGAGGTAGAAGGCCACCTGCTTCAACTTTCACATGTAAGAATTATTAACATTAGAGTCCGTAGCTAGAAGCATTAAATAGATACGCTACTCAATAATGTTAGAGAGGATAAAAGACCTAACAAAGTCACTTGGACAAAAGTATTTTGTGCAATAAGTTTCAAAACAAATTGGACTTATAACATTAATAAAATGCTGAGCTCTGAAGGGGTAAACAAATATAGATTGTTGAACATTCTCATTTTTATCATGTTAAAATATACCCCAGAGCAGTACTAAAGATTCCAAACAGTATTTCTTTTGCTTCGTGTGAAGACAATGGAATTTTATTTCAATGGTAAAAAAAGAATAGCATGTTCATATCTTAAAAAGTTCCCTATTTCCATTATAATGTACCAGTTCGTAAGTAACATGTTTCTTTCAAATAAAAAAGAAACCAAGATTCAATCCTATCGCAGCCAAATATTGCTGGAGTTCTATACATAATGAAGTCCATATACAAGTGAATTTTGTCCAGGCTAATTCACCCCCTTTTGTGTGTGTGGTTAAGGTTCAAACTTGATTTGATACATAATTAATACGTTTTTTTATTTACAGCATGTATGAGCAATATAAAATTAGTCAGTTTCTCTTCTACAATCTGTAGTTATATATCCAGTGTTAGTTGTCGCGAAAGTGATCTTAGATTCGGTCTACATTGCTTTTGATCTTTCCTAAATTTTATTCACAAATTCAGTCTTTGTTAAATGATGGTTTATTGAATTTCTCTTTGTTAGTTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTG</genome_strand>
        <mrna_strand>CGAGTTCTTCTTTTT-CCGATCAGCTAGTG-AAGTAGACGCCGAGCCATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCCAATTTTTCCTCTTCTTCTTCCAGATCCTTCCATCCTTCTCAACCTTCCCGCAACTCTCAGTCCCACCACACCAAAAATGTCAATTTTTCTACGCCTAATAGTACCCAAATTGAGAACAACGCTTCCGACAAGAAGACGAGCTCAAGCAGTTGGGATAAATCCATTGATGAAGATATTGATGACATTCAGAATTTAGTTGGAACTTGCCCTTTCATGTGTCCTG........................................................................................................................................................................................................TTGAGGAGAGGGAAAAGCGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGTCAATCATCACCAAGCCTTGCTGTTAAAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGCAGAACTATATCCGTAAAGACTTTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACTGAGCATCCCTTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E291237" ref_strand="+" ref_description="SGN-E291237 [cLET-2-H3]">
      <seq>tgaaagtagacgccgagccatggccggaaggagtcaacctccgtacaggccaagacctaatttttcctcttcttcttccagatcctaccacccttctcaaccttcccgcaactttcagtcccaccacaccaaaaatttcaattcttctacgcctaatggtaccccaattcagaacaacgcttccgacaacaagacgagctcaagcaattgggacaaagtcattgatgaagatattgacgacattcagagtttagttggaacttgccctttcatgtgtcctgttgaggagagggagaaaagagagaggctgcgagacttagctgtgtttgagaggctacatggaaatcctcgacagtcatcaccaagccttgctgttaaaaagttctgtaggactatatccgtgaagactctgcaagattctgatgtgaggcctctctcggtgttggaagatactttgaactatctgtgtaacttgctggactctaccgagcatccatttgaggtggntcatgacttcatctttgata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="83302" stop="80103"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83002" g_stop="82722" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="281" r_length="281" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82721" i_stop="82522" i_length="200">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82521" g_stop="82421" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="382" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82420" i_stop="80548" i_length="1873">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.742" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80547" g_stop="80403" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="527" r_length="145" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E291237" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>527</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E291237" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83002" e_stop="82722"/>
          <exon e_start="82521" e_stop="82421"/>
          <exon e_start="80547" e_stop="80403"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAAGTAGACGCCGAGCCATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTGGTACACCAATTCTCCTCTATTTTCCTTTATGGACTGCTTTTTTTAAAGTGCGCTAAAATGGAAGTAAACCAATAAATGCATAAACAATCAATTTGAAGTAAACTCTAGAAGGAGGTACTTCTACTGCCTTTAAATCCTGGAGCGTGTGAACCTGCAATATTAAATAAGTTTAGTGTTTTTTCTTTAAAAAAAAATTGCAGTTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAGGTACTCCCTTTTTATTTGCTAGTCTATTTTTGACTTGACACAAAATTTAAGAAAATTAATAATTAACAGTTTGAATCTTGTGGTCTTTGATTAAAGATATGAAAAAATGTATCAAAATGTCATCTCATGGACTTGAACATGGAGTGTTGAAATTAAAAAGTTGCCAATAAAGTAAAGAGACATTTTCTTTAAAACAAATTGACAGAGAAAGTAATACAAAAAAATTTGAAATTAAATGAGTTGAGTAACATTTTGGTATGCTAGCACGTAGGATGAATATTTTGATTAGTTATTTCTTTACCCTGTTTGTTTGATCAACTGAATTCTAAGGATAACTAGTCTCAACTCCAGTTAATAGAAGAAGGTTTATGACCAGTGAATGATTTATGAATCTTCTGAATACTAAAATAGCCGTCGGGTACATAGATTCACGTAACTAACTCCAACTGGATTCGTATTGAGGTGTAGTTGATAGTTGATACTCTATTAATTTGTTTGATCAGCTAAACTGAACTTGCTTTATGTTTCACTTCACTAAACATTTCTAGTTCGAACCAGCTTGTCAAATATGTGGAAACAATCTAAATTGTAATAGCTCATCAAGCATTTCATATGGCCTTTTTGTGATCATCAATGTACAGTCATGGATAAAAAATAAAATGTTTTAATCTTCGCCGATAATACAGGTGATAAGTTGTGCTTGTGTTGCCATCTGGGACATAAAAGTTAACATTTAGTTTTGGACTGTCATATAACAGTTTTACGACGCTACAATGTATGAATACAATAATACACCTTGGCTAAAACTTTGTTAGACGGCAGACTAAGTGAGTCTCCAGTTTTGAGGTTCCGTAAAAGAGATGAGAAACAGCTGGATAATACGACAAATGTAAAGCAATTTAATATAAGGAAGTAGAAAAAAGTTGGTGACTTATCCGATACCAAACAATTTTCCCTACCATGCATTGACTACTTACTGCCAAATTTTTAGATATTAGTGCCAAATGGTTAATACCAACCAAGCCGAGCTCATTTTTCATCGTGGATAACAGAACATGCTTTTTCCCTGAGAGTTAGAAGGCCCTTCCTTATTAATTTTGGAGGTAGAAGGCCACCTGCTTCAACTTTCACATGTAAGAATTATTAACATTAGAGTCCGTAGCTAGAAGCATTAAATAGATACGCTACTCAATAATGTTAGAGAGGATAAAAGACCTAACAAAGTCACTTGGACAAAAGTATTTTGTGCAATAAGTTTCAAAACAAATTGGACTTATAACATTAATAAAATGCTGAGCTCTGAAGGGGTAAACAAATATAGATTGTTGAACATTCTCATTTTTATCATGTTAAAATATACCCCAGAGCAGTACTAAAGATTCCAAACAGTATTTCTTTTGCTTCGTGTGAAGACAATGGAATTTTATTTCAATGGTAAAAAAAGAATAGCATGTTCATATCTTAAAAAGTTCCCTATTTCCATTATAATGTACCAGTTCGTAAGTAACATGTTTCTTTCAAATAAAAAAGAAACCAAGATTCAATCCTATCGCAGCCAAATATTGCTGGAGTTCTATACATAATGAAGTCCATATACAAGTGAATTTTGTCCAGGCTAATTCACCCCCTTTTGTGTGTGTGGTTAAGGTTCAAACTTGATTTGATACATAATTAATACGTTTTTTTATTTACAGCATGTATGAGCAATATAAAATTAGTCAGTTTCTCTTCTACAATCTGTAGTTATATATCCAGTGTTAGTTGTCGCGAAAGTGATCTTAGATTCGGTCTACATTGCTTTTGATCTTTCCTAAATTTTATTCACAAATTCAGTCTTTGTTAAATGATGGTTTATTGAATTTCTCTTTGTTAGTTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGATA</genome_strand>
        <mrna_strand>TGAAAGTAGACGCCGAGCCATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTG........................................................................................................................................................................................................TTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGNTCATGACTTCATCTTTGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E446190" ref_strand="+" ref_description="SGN-E446190 [cSTA-20-C14]">
      <seq>cgagttcttctttttccgatcagctagtgaagtagacgccgagccatggccggaaggagtcaacctccgtacaggccaagacccaatttttcctcttcttcttccagatccttccatccttctcaaccttcccgcaactctcagtcccaccacaccaaaaatgtcaatttttctacgcctaatagtacccaaattgagaacaacgcttccgacaagaagacgagctcaagcagttgggataaatccattgatgaagatattgatgacattcagaatttagttggaacttgccctttcatgtgtcctgttgaggagagggaaaagcgagagaggctgcgagacttagctgtgtttgagaggctacatggaaatcctcgtcaatcatcaccaagccttgctgttaaaaagttctgcagaactatatccgtaaagactttgcaagattctgatgtgaggcctctctcggtgttggaagatactttgaactatctgtgtaacttgctggactctactgagcatccctttgaggtggttcatgacttcatctttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="83327" stop="80104"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83030" g_stop="82722" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="307" r_length="307" r_score="0.932"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82721" i_stop="82522" i_length="200">
            <donor d_prob="0.968" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82521" g_stop="82421" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="408" r_length="101" r_score="0.950"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82420" i_stop="80548" i_length="1873">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.742" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80547" g_stop="80404" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="552" r_length="144" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E446190" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E446190" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83030" e_stop="82722"/>
          <exon e_start="82521" e_stop="82421"/>
          <exon e_start="80547" e_stop="80404"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTCTTCTTTTTGCCGATCAGCCAGTGAAAGTAGACGCCGAGCCATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTGGTACACCAATTCTCCTCTATTTTCCTTTATGGACTGCTTTTTTTAAAGTGCGCTAAAATGGAAGTAAACCAATAAATGCATAAACAATCAATTTGAAGTAAACTCTAGAAGGAGGTACTTCTACTGCCTTTAAATCCTGGAGCGTGTGAACCTGCAATATTAAATAAGTTTAGTGTTTTTTCTTTAAAAAAAAATTGCAGTTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAGGTACTCCCTTTTTATTTGCTAGTCTATTTTTGACTTGACACAAAATTTAAGAAAATTAATAATTAACAGTTTGAATCTTGTGGTCTTTGATTAAAGATATGAAAAAATGTATCAAAATGTCATCTCATGGACTTGAACATGGAGTGTTGAAATTAAAAAGTTGCCAATAAAGTAAAGAGACATTTTCTTTAAAACAAATTGACAGAGAAAGTAATACAAAAAAATTTGAAATTAAATGAGTTGAGTAACATTTTGGTATGCTAGCACGTAGGATGAATATTTTGATTAGTTATTTCTTTACCCTGTTTGTTTGATCAACTGAATTCTAAGGATAACTAGTCTCAACTCCAGTTAATAGAAGAAGGTTTATGACCAGTGAATGATTTATGAATCTTCTGAATACTAAAATAGCCGTCGGGTACATAGATTCACGTAACTAACTCCAACTGGATTCGTATTGAGGTGTAGTTGATAGTTGATACTCTATTAATTTGTTTGATCAGCTAAACTGAACTTGCTTTATGTTTCACTTCACTAAACATTTCTAGTTCGAACCAGCTTGTCAAATATGTGGAAACAATCTAAATTGTAATAGCTCATCAAGCATTTCATATGGCCTTTTTGTGATCATCAATGTACAGTCATGGATAAAAAATAAAATGTTTTAATCTTCGCCGATAATACAGGTGATAAGTTGTGCTTGTGTTGCCATCTGGGACATAAAAGTTAACATTTAGTTTTGGACTGTCATATAACAGTTTTACGACGCTACAATGTATGAATACAATAATACACCTTGGCTAAAACTTTGTTAGACGGCAGACTAAGTGAGTCTCCAGTTTTGAGGTTCCGTAAAAGAGATGAGAAACAGCTGGATAATACGACAAATGTAAAGCAATTTAATATAAGGAAGTAGAAAAAAGTTGGTGACTTATCCGATACCAAACAATTTTCCCTACCATGCATTGACTACTTACTGCCAAATTTTTAGATATTAGTGCCAAATGGTTAATACCAACCAAGCCGAGCTCATTTTTCATCGTGGATAACAGAACATGCTTTTTCCCTGAGAGTTAGAAGGCCCTTCCTTATTAATTTTGGAGGTAGAAGGCCACCTGCTTCAACTTTCACATGTAAGAATTATTAACATTAGAGTCCGTAGCTAGAAGCATTAAATAGATACGCTACTCAATAATGTTAGAGAGGATAAAAGACCTAACAAAGTCACTTGGACAAAAGTATTTTGTGCAATAAGTTTCAAAACAAATTGGACTTATAACATTAATAAAATGCTGAGCTCTGAAGGGGTAAACAAATATAGATTGTTGAACATTCTCATTTTTATCATGTTAAAATATACCCCAGAGCAGTACTAAAGATTCCAAACAGTATTTCTTTTGCTTCGTGTGAAGACAATGGAATTTTATTTCAATGGTAAAAAAAGAATAGCATGTTCATATCTTAAAAAGTTCCCTATTTCCATTATAATGTACCAGTTCGTAAGTAACATGTTTCTTTCAAATAAAAAAGAAACCAAGATTCAATCCTATCGCAGCCAAATATTGCTGGAGTTCTATACATAATGAAGTCCATATACAAGTGAATTTTGTCCAGGCTAATTCACCCCCTTTTGTGTGTGTGGTTAAGGTTCAAACTTGATTTGATACATAATTAATACGTTTTTTTATTTACAGCATGTATGAGCAATATAAAATTAGTCAGTTTCTCTTCTACAATCTGTAGTTATATATCCAGTGTTAGTTGTCGCGAAAGTGATCTTAGATTCGGTCTACATTGCTTTTGATCTTTCCTAAATTTTATTCACAAATTCAGTCTTTGTTAAATGATGGTTTATTGAATTTCTCTTTGTTAGTTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGAT</genome_strand>
        <mrna_strand>CGAGTTCTTCTTTTT-CCGATCAGCTAGTG-AAGTAGACGCCGAGCCATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCCAATTTTTCCTCTTCTTCTTCCAGATCCTTCCATCCTTCTCAACCTTCCCGCAACTCTCAGTCCCACCACACCAAAAATGTCAATTTTTCTACGCCTAATAGTACCCAAATTGAGAACAACGCTTCCGACAAGAAGACGAGCTCAAGCAGTTGGGATAAATCCATTGATGAAGATATTGATGACATTCAGAATTTAGTTGGAACTTGCCCTTTCATGTGTCCTG........................................................................................................................................................................................................TTGAGGAGAGGGAAAAGCGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGTCAATCATCACCAAGCCTTGCTGTTAAAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGCAGAACTATATCCGTAAAGACTTTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACTGAGCATCCCTTTGAGGTGGTTCATGACTTCATCTTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E269798" ref_strand="+" ref_description="SGN-E269798 [cLEM-17-I19]">
      <seq>gccgagccatggccggaaggagtcaacctccgtacaggccaagacctaatttttgctcttcttcttccagatcctaccacccttctcaaccttcccgcaactttcagtcccaccacaccaaaaatttcaattcttctacgcctaatggtaccccaattcagaacaacgcttccgacaacaagacgagctcaagcaattgggacaaagtcattgatgaagatattgacgacattcagagtttagttggaacttgccctttcatgtgtcctgttgaggagagggagaaaagagagaggctgcgagacttagctgtgtttgagaggctacatggaaatcctcgacagtcatcaccaagccttgctgttaaaaagttctgtaggactatatccgtgaagactctgcaagattctgatgtgaggcctctctcggtgttggaagatactttgaactatctgtgtaacttgctggactctaccgagcatccattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="83291" stop="80131"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82991" g_stop="82722" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="270" r_length="270" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82721" i_stop="82522" i_length="200">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82521" g_stop="82421" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="371" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82420" i_stop="80548" i_length="1873">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.742" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80547" g_stop="80431" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="488" r_length="117" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E269798" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E269798" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82991" e_stop="82722"/>
          <exon e_start="82521" e_stop="82421"/>
          <exon e_start="80547" e_stop="80431"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCGAGCCATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTGGTACACCAATTCTCCTCTATTTTCCTTTATGGACTGCTTTTTTTAAAGTGCGCTAAAATGGAAGTAAACCAATAAATGCATAAACAATCAATTTGAAGTAAACTCTAGAAGGAGGTACTTCTACTGCCTTTAAATCCTGGAGCGTGTGAACCTGCAATATTAAATAAGTTTAGTGTTTTTTCTTTAAAAAAAAATTGCAGTTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAGGTACTCCCTTTTTATTTGCTAGTCTATTTTTGACTTGACACAAAATTTAAGAAAATTAATAATTAACAGTTTGAATCTTGTGGTCTTTGATTAAAGATATGAAAAAATGTATCAAAATGTCATCTCATGGACTTGAACATGGAGTGTTGAAATTAAAAAGTTGCCAATAAAGTAAAGAGACATTTTCTTTAAAACAAATTGACAGAGAAAGTAATACAAAAAAATTTGAAATTAAATGAGTTGAGTAACATTTTGGTATGCTAGCACGTAGGATGAATATTTTGATTAGTTATTTCTTTACCCTGTTTGTTTGATCAACTGAATTCTAAGGATAACTAGTCTCAACTCCAGTTAATAGAAGAAGGTTTATGACCAGTGAATGATTTATGAATCTTCTGAATACTAAAATAGCCGTCGGGTACATAGATTCACGTAACTAACTCCAACTGGATTCGTATTGAGGTGTAGTTGATAGTTGATACTCTATTAATTTGTTTGATCAGCTAAACTGAACTTGCTTTATGTTTCACTTCACTAAACATTTCTAGTTCGAACCAGCTTGTCAAATATGTGGAAACAATCTAAATTGTAATAGCTCATCAAGCATTTCATATGGCCTTTTTGTGATCATCAATGTACAGTCATGGATAAAAAATAAAATGTTTTAATCTTCGCCGATAATACAGGTGATAAGTTGTGCTTGTGTTGCCATCTGGGACATAAAAGTTAACATTTAGTTTTGGACTGTCATATAACAGTTTTACGACGCTACAATGTATGAATACAATAATACACCTTGGCTAAAACTTTGTTAGACGGCAGACTAAGTGAGTCTCCAGTTTTGAGGTTCCGTAAAAGAGATGAGAAACAGCTGGATAATACGACAAATGTAAAGCAATTTAATATAAGGAAGTAGAAAAAAGTTGGTGACTTATCCGATACCAAACAATTTTCCCTACCATGCATTGACTACTTACTGCCAAATTTTTAGATATTAGTGCCAAATGGTTAATACCAACCAAGCCGAGCTCATTTTTCATCGTGGATAACAGAACATGCTTTTTCCCTGAGAGTTAGAAGGCCCTTCCTTATTAATTTTGGAGGTAGAAGGCCACCTGCTTCAACTTTCACATGTAAGAATTATTAACATTAGAGTCCGTAGCTAGAAGCATTAAATAGATACGCTACTCAATAATGTTAGAGAGGATAAAAGACCTAACAAAGTCACTTGGACAAAAGTATTTTGTGCAATAAGTTTCAAAACAAATTGGACTTATAACATTAATAAAATGCTGAGCTCTGAAGGGGTAAACAAATATAGATTGTTGAACATTCTCATTTTTATCATGTTAAAATATACCCCAGAGCAGTACTAAAGATTCCAAACAGTATTTCTTTTGCTTCGTGTGAAGACAATGGAATTTTATTTCAATGGTAAAAAAAGAATAGCATGTTCATATCTTAAAAAGTTCCCTATTTCCATTATAATGTACCAGTTCGTAAGTAACATGTTTCTTTCAAATAAAAAAGAAACCAAGATTCAATCCTATCGCAGCCAAATATTGCTGGAGTTCTATACATAATGAAGTCCATATACAAGTGAATTTTGTCCAGGCTAATTCACCCCCTTTTGTGTGTGTGGTTAAGGTTCAAACTTGATTTGATACATAATTAATACGTTTTTTTATTTACAGCATGTATGAGCAATATAAAATTAGTCAGTTTCTCTTCTACAATCTGTAGTTATATATCCAGTGTTAGTTGTCGCGAAAGTGATCTTAGATTCGGTCTACATTGCTTTTGATCTTTCCTAAATTTTATTCACAAATTCAGTCTTTGTTAAATGATGGTTTATTGAATTTCTCTTTGTTAGTTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTT</genome_strand>
        <mrna_strand>GCCGAGCCATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTGCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTG........................................................................................................................................................................................................TTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E206424" ref_strand="+" ref_description="SGN-E206424 [cLEC-23-G3]">
      <seq>accatttttatattaggacggtgttgctcgttcttctttgtgccgatcagccagtgaaagtagacgccgagccatggccggaaggagtcaacctccgtacaggccaagacctaatttttcctcttcttcttccagatcctaccacccttctcaaccttcccgcaactttcagtcccaccacaccaaaaatttcaattcttctacgcctaatggtaccccaattcagaacaacgcttccgacaacaagacgagctcaagcaattgggacaaagtcattgatgaagatattgacgacattcagagtttagttggaacttgccctttcatgtgtcctgttgaggagagggagaaaagagagaggctgcgagacttagctgtgtttgagaggctacatggaaatcctcgacagtcatcaccaagccttgctgttaaaaagttctgtaggactatatccgtgaagactctgcaagattctgatgtgaggcctctctcggtgttggaagatactttgaactatctgtgtaactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="83356" stop="80156"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83056" g_stop="82722" g_length="335"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="335" r_length="335" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82721" i_stop="82522" i_length="200">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82521" g_stop="82421" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="336" r_stop="436" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82420" i_stop="80548" i_length="1873">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.742" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80547" g_stop="80456" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="528" r_length="92" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E206424" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E206424" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83056" e_stop="82722"/>
          <exon e_start="82521" e_stop="82421"/>
          <exon e_start="80547" e_stop="80456"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCATTTTTATATTAGGACGGTGTTGCTCGTTCTTCTTTTTGCCGATCAGCCAGTGAAAGTAGACGCCGAGCCATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTGGTACACCAATTCTCCTCTATTTTCCTTTATGGACTGCTTTTTTTAAAGTGCGCTAAAATGGAAGTAAACCAATAAATGCATAAACAATCAATTTGAAGTAAACTCTAGAAGGAGGTACTTCTACTGCCTTTAAATCCTGGAGCGTGTGAACCTGCAATATTAAATAAGTTTAGTGTTTTTTCTTTAAAAAAAAATTGCAGTTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAGGTACTCCCTTTTTATTTGCTAGTCTATTTTTGACTTGACACAAAATTTAAGAAAATTAATAATTAACAGTTTGAATCTTGTGGTCTTTGATTAAAGATATGAAAAAATGTATCAAAATGTCATCTCATGGACTTGAACATGGAGTGTTGAAATTAAAAAGTTGCCAATAAAGTAAAGAGACATTTTCTTTAAAACAAATTGACAGAGAAAGTAATACAAAAAAATTTGAAATTAAATGAGTTGAGTAACATTTTGGTATGCTAGCACGTAGGATGAATATTTTGATTAGTTATTTCTTTACCCTGTTTGTTTGATCAACTGAATTCTAAGGATAACTAGTCTCAACTCCAGTTAATAGAAGAAGGTTTATGACCAGTGAATGATTTATGAATCTTCTGAATACTAAAATAGCCGTCGGGTACATAGATTCACGTAACTAACTCCAACTGGATTCGTATTGAGGTGTAGTTGATAGTTGATACTCTATTAATTTGTTTGATCAGCTAAACTGAACTTGCTTTATGTTTCACTTCACTAAACATTTCTAGTTCGAACCAGCTTGTCAAATATGTGGAAACAATCTAAATTGTAATAGCTCATCAAGCATTTCATATGGCCTTTTTGTGATCATCAATGTACAGTCATGGATAAAAAATAAAATGTTTTAATCTTCGCCGATAATACAGGTGATAAGTTGTGCTTGTGTTGCCATCTGGGACATAAAAGTTAACATTTAGTTTTGGACTGTCATATAACAGTTTTACGACGCTACAATGTATGAATACAATAATACACCTTGGCTAAAACTTTGTTAGACGGCAGACTAAGTGAGTCTCCAGTTTTGAGGTTCCGTAAAAGAGATGAGAAACAGCTGGATAATACGACAAATGTAAAGCAATTTAATATAAGGAAGTAGAAAAAAGTTGGTGACTTATCCGATACCAAACAATTTTCCCTACCATGCATTGACTACTTACTGCCAAATTTTTAGATATTAGTGCCAAATGGTTAATACCAACCAAGCCGAGCTCATTTTTCATCGTGGATAACAGAACATGCTTTTTCCCTGAGAGTTAGAAGGCCCTTCCTTATTAATTTTGGAGGTAGAAGGCCACCTGCTTCAACTTTCACATGTAAGAATTATTAACATTAGAGTCCGTAGCTAGAAGCATTAAATAGATACGCTACTCAATAATGTTAGAGAGGATAAAAGACCTAACAAAGTCACTTGGACAAAAGTATTTTGTGCAATAAGTTTCAAAACAAATTGGACTTATAACATTAATAAAATGCTGAGCTCTGAAGGGGTAAACAAATATAGATTGTTGAACATTCTCATTTTTATCATGTTAAAATATACCCCAGAGCAGTACTAAAGATTCCAAACAGTATTTCTTTTGCTTCGTGTGAAGACAATGGAATTTTATTTCAATGGTAAAAAAAGAATAGCATGTTCATATCTTAAAAAGTTCCCTATTTCCATTATAATGTACCAGTTCGTAAGTAACATGTTTCTTTCAAATAAAAAAGAAACCAAGATTCAATCCTATCGCAGCCAAATATTGCTGGAGTTCTATACATAATGAAGTCCATATACAAGTGAATTTTGTCCAGGCTAATTCACCCCCTTTTGTGTGTGTGGTTAAGGTTCAAACTTGATTTGATACATAATTAATACGTTTTTTTATTTACAGCATGTATGAGCAATATAAAATTAGTCAGTTTCTCTTCTACAATCTGTAGTTATATATCCAGTGTTAGTTGTCGCGAAAGTGATCTTAGATTCGGTCTACATTGCTTTTGATCTTTCCTAAATTTTATTCACAAATTCAGTCTTTGTTAAATGATGGTTTATTGAATTTCTCTTTGTTAGTTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTT</genome_strand>
        <mrna_strand>ACCATTTTTATATTAGGACGGTGTTGCTCGTTCTTCTTTGTGCCGATCAGCCAGTGAAAGTAGACGCCGAGCCATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTG........................................................................................................................................................................................................TTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E303522" ref_strand="+" ref_description="SGN-E303522 [cLEX-2-N13]">
      <seq>agacgccgagccatggccggaaggagtcaacctccgtacaggccaagacctaatttttcctcttcttcttccagatcctaccacccttctcaaccttcccgcaactttcagtcccaccacaccaaaaatttcaattcttctacgcctaatggtaccccaattcagaacaacgcttccgacaacaagacgagctcaagcaattgggacaaagtcattgatgaagatattgacgacattcagagtttagttggaacttgccctttcatgtgtcctgttgaggagagggagaaaagagagaggctgcgagacttagctgtgtttgagaggctacatggaaatcctcgacagtcatcaccaagccttgctgttaaaaagttctgtaggactatatccgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="83295" stop="80228"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82995" g_stop="82722" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82721" i_stop="82522" i_length="200">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82521" g_stop="82421" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="375" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82420" i_stop="80548" i_length="1873">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.742" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80547" g_stop="80528" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="395" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E303522" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>395</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E303522" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82995" e_stop="82722"/>
          <exon e_start="82521" e_stop="82421"/>
          <exon e_start="80547" e_stop="80528"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACGCCGAGCCATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTGGTACACCAATTCTCCTCTATTTTCCTTTATGGACTGCTTTTTTTAAAGTGCGCTAAAATGGAAGTAAACCAATAAATGCATAAACAATCAATTTGAAGTAAACTCTAGAAGGAGGTACTTCTACTGCCTTTAAATCCTGGAGCGTGTGAACCTGCAATATTAAATAAGTTTAGTGTTTTTTCTTTAAAAAAAAATTGCAGTTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAGGTACTCCCTTTTTATTTGCTAGTCTATTTTTGACTTGACACAAAATTTAAGAAAATTAATAATTAACAGTTTGAATCTTGTGGTCTTTGATTAAAGATATGAAAAAATGTATCAAAATGTCATCTCATGGACTTGAACATGGAGTGTTGAAATTAAAAAGTTGCCAATAAAGTAAAGAGACATTTTCTTTAAAACAAATTGACAGAGAAAGTAATACAAAAAAATTTGAAATTAAATGAGTTGAGTAACATTTTGGTATGCTAGCACGTAGGATGAATATTTTGATTAGTTATTTCTTTACCCTGTTTGTTTGATCAACTGAATTCTAAGGATAACTAGTCTCAACTCCAGTTAATAGAAGAAGGTTTATGACCAGTGAATGATTTATGAATCTTCTGAATACTAAAATAGCCGTCGGGTACATAGATTCACGTAACTAACTCCAACTGGATTCGTATTGAGGTGTAGTTGATAGTTGATACTCTATTAATTTGTTTGATCAGCTAAACTGAACTTGCTTTATGTTTCACTTCACTAAACATTTCTAGTTCGAACCAGCTTGTCAAATATGTGGAAACAATCTAAATTGTAATAGCTCATCAAGCATTTCATATGGCCTTTTTGTGATCATCAATGTACAGTCATGGATAAAAAATAAAATGTTTTAATCTTCGCCGATAATACAGGTGATAAGTTGTGCTTGTGTTGCCATCTGGGACATAAAAGTTAACATTTAGTTTTGGACTGTCATATAACAGTTTTACGACGCTACAATGTATGAATACAATAATACACCTTGGCTAAAACTTTGTTAGACGGCAGACTAAGTGAGTCTCCAGTTTTGAGGTTCCGTAAAAGAGATGAGAAACAGCTGGATAATACGACAAATGTAAAGCAATTTAATATAAGGAAGTAGAAAAAAGTTGGTGACTTATCCGATACCAAACAATTTTCCCTACCATGCATTGACTACTTACTGCCAAATTTTTAGATATTAGTGCCAAATGGTTAATACCAACCAAGCCGAGCTCATTTTTCATCGTGGATAACAGAACATGCTTTTTCCCTGAGAGTTAGAAGGCCCTTCCTTATTAATTTTGGAGGTAGAAGGCCACCTGCTTCAACTTTCACATGTAAGAATTATTAACATTAGAGTCCGTAGCTAGAAGCATTAAATAGATACGCTACTCAATAATGTTAGAGAGGATAAAAGACCTAACAAAGTCACTTGGACAAAAGTATTTTGTGCAATAAGTTTCAAAACAAATTGGACTTATAACATTAATAAAATGCTGAGCTCTGAAGGGGTAAACAAATATAGATTGTTGAACATTCTCATTTTTATCATGTTAAAATATACCCCAGAGCAGTACTAAAGATTCCAAACAGTATTTCTTTTGCTTCGTGTGAAGACAATGGAATTTTATTTCAATGGTAAAAAAAGAATAGCATGTTCATATCTTAAAAAGTTCCCTATTTCCATTATAATGTACCAGTTCGTAAGTAACATGTTTCTTTCAAATAAAAAAGAAACCAAGATTCAATCCTATCGCAGCCAAATATTGCTGGAGTTCTATACATAATGAAGTCCATATACAAGTGAATTTTGTCCAGGCTAATTCACCCCCTTTTGTGTGTGTGGTTAAGGTTCAAACTTGATTTGATACATAATTAATACGTTTTTTTATTTACAGCATGTATGAGCAATATAAAATTAGTCAGTTTCTCTTCTACAATCTGTAGTTATATATCCAGTGTTAGTTGTCGCGAAAGTGATCTTAGATTCGGTCTACATTGCTTTTGATCTTTCCTAAATTTTATTCACAAATTCAGTCTTTGTTAAATGATGGTTTATTGAATTTCTCTTTGTTAGTTCTGTAGGACTATATCCGT</genome_strand>
        <mrna_strand>AGACGCCGAGCCATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTG........................................................................................................................................................................................................TTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTAGGACTATATCCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E333444" ref_strand="+" ref_description="SGN-E333444 [cTOD-20-G3]">
      <seq>tctcacgttgcctaatttggtgctgcttgagatctgcttcaatctctcccatttccatcttcttacagatggatatagtgaaggatttaaccgctggtactgttggaggagcagcacaattgatagttgggcacccttttgataccatcaaagtcaagctccaaagccagcctactccacttccagggcaacctcctaagtatgcaggggccatagatgctgtcaggaaaacagtggcctctgaaggtccaagggggttatacaaaggcatgggagctccacttgccactgtagccgccttcaacgctttgcttttcactgttagaggtcaaactgaggccctgttaaggtctgaaccgggagctcctcttactgtcaagcaacaaatcctttgtggggctgttgctggaactgctgcatcatttcttgcctgcccgactgaactcataaaatgcaggttgccagcgcacagcgcattggcaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="86181" stop="90213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86481" g_stop="86548" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86549" i_stop="88763" i_length="2215">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88764" g_stop="89152" g_length="389"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="457" r_length="389" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89153" i_stop="89885" i_length="733">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89886" g_stop="89913" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="485" r_length="28" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E333444" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>485</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E333444" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86481" e_stop="86548"/>
          <exon e_start="88764" e_stop="89152"/>
          <exon e_start="89886" e_stop="89913"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCACGTTGCCTAATTTGGTGCTGCTTGAGATCTGCTTCAATCTCTCCCATTTCCATCTTCTTACAGGTACGATTCACTATCTCTACATTCGCTGTTCCGTCACCGCTTCTCTTTTTCTGTTTAATTTATTGAATGGAGATGGAAGAAAGGAGATTTTGAAGGTTGGAGTCGGATCCAAAAATTTATACAGTTAATCAATTGAGCTACTAATTAACATCGAATTCAAATCTGGTTGCGTTTTAGCCATTCTATGTTAAAGAGAAAATCGATAGTCTCTGTTTCTAAAGAGACAGAGTCAGATTGCAGGCGAAGGTTTTTGATTTGCGTTGGGTTGGGTTGAATTTTTTATTATTAGTCTTCACTAACAACAATCAGTCATGTTATTAATTAGTTTTACTTGTGATTTTTCATTAGTACGGTTTTTGAAATTCCCATTATTGGAGAAACGGGACATGTTTTGAAGCCGGCGCATATTAAATTTTCATCATTTATTCACCTGCCATCTTAACGTCCCCATTTTATTTCCACCATTAAAGACTTAAACTTTACTAGGCGTCAAACAAAAAAATCATGAAAATTTTGTTTTGGTTTACTTTTACTCGTCCCTCTTAAATGAATTGTTATTTTTATTTTATATTGACGTATCAAGAAAAGATAATAAATAATATTTTTTCATATTAATTCAGTATTTAATATATTTTTTTAAAATTATTTTTTCAAGAGTTAATACTAAATATAATTTAATTAAAAATTAGTTTAGTAAAATACATATATTAGTAATCATTTTATTAACGAATATATCAATTCAAAATGTAACAAGTAAAAGCAAACGGAGAAAATAATTTTGATATTGTAGGTTTATAGTAATAATCAATTAATGTTTCGATTCCGCGTCTTGCTTTGAAGTTACGTATATACATGTTCTAGCTTGCATATTTTATTTCTTCCAGGTTTGTTTTTTTCCTTTGATACAATTTATTTATTTATATTTGTGCGTGCTAGCAATAAAATACTAATTAAATTAGGGATTGCATTACCTGTATGCAAATAACGCATAGGACGGCTAATTGATTTCAATGTTATGTAACACGTAGGACCCTCTCCGTCACTGCAAAAAAGTCTCCCCTCTTTGTTTGTGTGCTAAAAGGCTGGTAGGAATTAAATCTCTTGATCACTTTAACATTAACTTTGAAAAAAACAAATTAATTTTTTTTTACTAAAATATAAATTAAAATAATTTGTAAAACAATACAAAATAAATCTTTCAAATCTAACAGGCTGATTTCACAGTGTTTAACTATTATGTGTATTATTATTATTACTATTGTTATTATTATTATTTTTTATTCAATTAAGCAAGTAAAAAAATATTTTTAACGCGATTGAGGGATTAATTAATAATTCACTTTTAAGTGTAAGGTGTTTTCAGTATTCTCTTGAAAATTCAACGCTGAAATGAATCTTTAACCCGTTTAAAGTGAGGCTTAAATACTGCATAACATGTTTTATTCGGACCCTTTGGCTTCAAAAAGTTCATCTTGGATCCACTTCAAGAGTTTATTCCTATCCCTGCCAAACTTATTCTTTTTTTTTGCCCTCCCCCGGAGTTACCACCTTTTTGTTCTCTTGATGACTTGAATTCATAACTTTCGAATTGAAAGTGAAAGTTGCTTACTATTCGAGCAACTCCCTCTCGTCTGCCAAACTTATTCTTGATCACTGCCTAAGAAGTAAAAATATTTAATTAGCTCTCTGATAGTACTAGAATTCACTGTTTTGAAAAGTATCAGGTTTAACCCTTCCTGGTACTATTATAAAAGAAGCATATCAGGTAAGAGTTTCATTGAGGAAAAACATGCTTCAGAAATACTTCGATTTGTATATGGAAACTAGCAAAGAAGTTGAAAAATAGTCTGGCAAAACATTATAGTATAGGCATAACAATGTGTATTATTATTTCGAAATAGTTTTGTTTATTAAGCAGTATAACATTAGTAAGAAAGACAGATGTAATTCAGAAATGTAATGCTTCTGAAATCTTTTTACATATTTCGTAATTGTTATTGGCAAAACAATCACAGGCATACTACTTATATCGACAATGAATTAGAAGATTTCATTTCTATGCTAGTGAATTAGAACTTTGCCTTCCTTATCAATATAACTCTTCTCAAAGAAAGTTATACGGCATCTAGCTCCCATTGTGTACCAAAACAATAATGCTGCACTGGGAGATACGATTTGTTCCTTAATTCTTGCGTCTTGTTTCATAATGTTCCAGATGGATATAGTGAAGGATTTAACCGCTGGTACTGTTGGAGGAGCAGCACAATTGATAGTTGGGCACCCTTTTGATACCATCAAAGTCAAGCTCCAAAGCCAGCCTACTCCACTTCCAGGGCAACCTCCTAAGTATGCAGGGGCCATAGATGCTGTCAGGAAAACAGTGGCCTCTGAAGGTCCAAGGGGGTTATACAAAGGCATGGGAGCTCCACTTGCCACTGTAGCCGCCTTCAACGCTTTGCTTTTCACTGTTAGAGGTCAAACTGAGGCCCTGTTAAGGTCTGAACCGGGAGCTCCTCTTACTGTCAAGCAACAAATCCTTTGTGGGGCTGTTGCTGGAACTGCTGCATCATTTCTTGCCTGCCCGACTGAACTCATAAAATGCAGGTATGCTCGTTAATGCATCCAATTTAGAAATATAGTACTCCCTGTCTTAATTTGTCTGAAACTGCAAGTGTTAATTTGACTGATATTGAAAGTTAAACTGAACTAGATTAAATTATTTTTAAAAACCAATATGGATATTTAGAAACTAAACATACTATAATTCACGATTGACCTATATCAAGATCGTAAAATAATACATTATAAAATGTTAGTCAAAGTTCAGTAACCTTTGAAAATGAATAGTAGTAATGAATTCACATGAGAGCTAATATCGTGCCTGTTTTCGAATCCTGCATCCTGAATCTCCATATGTCCAGTACAACAGGTTCACTTTTTTTGGACAAGAGTCTAGACTATAGATGGCAAAAATACTTTGGTGCAGAGGGATTAGCATATGTCTTCTTATATCTAAACTAGCTCCGTAAACTAATACAGTAACTTATAATAGATGAGCCCGTTATCCTTATGTTCTAAACTCGCTTCTTGGTACAAGGGGAGAGGCAAAGATACCCGCTTTAAAATGGAATCTTTTCAAGTGTTTGTAAATTTTCCTCAGCCCCTTTTGTATTAACCGTCAGGTTGACTGGTTGGAACAGGAACTCATCGTTCTGCTTTTCTTTCCGCCAGTGTAGTATACATGTGTTTTGCAGTTGGACTCTATTACTGTAAAAACTATTTGTATTGTTTCATCTATATTAGCAAATTAACTGTTGATTCTCAAATGTGAGTGCAGGTTGCAAGCGCACAGCGCATTGGCAAGT</genome_strand>
        <mrna_strand>TCTCACGTTGCCTAATTTGGTGCTGCTTGAGATCTGCTTCAATCTCTCCCATTTCCATCTTCTTACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATATAGTGAAGGATTTAACCGCTGGTACTGTTGGAGGAGCAGCACAATTGATAGTTGGGCACCCTTTTGATACCATCAAAGTCAAGCTCCAAAGCCAGCCTACTCCACTTCCAGGGCAACCTCCTAAGTATGCAGGGGCCATAGATGCTGTCAGGAAAACAGTGGCCTCTGAAGGTCCAAGGGGGTTATACAAAGGCATGGGAGCTCCACTTGCCACTGTAGCCGCCTTCAACGCTTTGCTTTTCACTGTTAGAGGTCAAACTGAGGCCCTGTTAAGGTCTGAACCGGGAGCTCCTCTTACTGTCAAGCAACAAATCCTTTGTGGGGCTGTTGCTGGAACTGCTGCATCATTTCTTGCCTGCCCGACTGAACTCATAAAATGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCAGCGCACAGCGCATTGGCAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E393888" ref_strand="+" ref_description="SGN-E393888 [TUS-14-C16]">
      <seq>ttgcctaatttggtgctgcttgagatctgcttcaatctctcccatttccatcttcttacagatggatatagtgaaggatttaaccgctggtactgttggaggagcagcacaattgatagttgggcacccttttgataccatcaaagtcaagctccaaagccagcctactccacttccagggcaacctcctaagtatgcaggggccatagatgctgtcaggaaaacagtggcctctgaaggtccaagggggttatacaaaggcatgggagctccacttgccactgtagccgccttcaacgctttgcttttcactgttagaggtcaaactgaggccctgttaaggtctgaaccgggagctcctcttactgtcaagcaacaaatcctttgtggggctgttgctggaactgctgcatcatttcttgcctgcccgactgaactcataaaatgcaggttgcaagcgcacagcgcattggcaagtgtaggatcagcctctgcggccataaagtatacagggccaatggatgttgcaagacacgttctccgttcagaaggaggtgtaaggggtctcttcaagggtatgtgcccccccctggcacgagaaataccgggaaatgctgttatgtttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="86188" stop="90361"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86488" g_stop="86548" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86549" i_stop="88763" i_length="2215">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88764" g_stop="89152" g_length="389"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="450" r_length="389" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89153" i_stop="89885" i_length="733">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89886" g_stop="90061" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="626" r_length="176" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E393888" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>626</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E393888" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86488" e_stop="86548"/>
          <exon e_start="88764" e_stop="89152"/>
          <exon e_start="89886" e_stop="90061"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCCTAATTTGGTGCTGCTTGAGATCTGCTTCAATCTCTCCCATTTCCATCTTCTTACAGGTACGATTCACTATCTCTACATTCGCTGTTCCGTCACCGCTTCTCTTTTTCTGTTTAATTTATTGAATGGAGATGGAAGAAAGGAGATTTTGAAGGTTGGAGTCGGATCCAAAAATTTATACAGTTAATCAATTGAGCTACTAATTAACATCGAATTCAAATCTGGTTGCGTTTTAGCCATTCTATGTTAAAGAGAAAATCGATAGTCTCTGTTTCTAAAGAGACAGAGTCAGATTGCAGGCGAAGGTTTTTGATTTGCGTTGGGTTGGGTTGAATTTTTTATTATTAGTCTTCACTAACAACAATCAGTCATGTTATTAATTAGTTTTACTTGTGATTTTTCATTAGTACGGTTTTTGAAATTCCCATTATTGGAGAAACGGGACATGTTTTGAAGCCGGCGCATATTAAATTTTCATCATTTATTCACCTGCCATCTTAACGTCCCCATTTTATTTCCACCATTAAAGACTTAAACTTTACTAGGCGTCAAACAAAAAAATCATGAAAATTTTGTTTTGGTTTACTTTTACTCGTCCCTCTTAAATGAATTGTTATTTTTATTTTATATTGACGTATCAAGAAAAGATAATAAATAATATTTTTTCATATTAATTCAGTATTTAATATATTTTTTTAAAATTATTTTTTCAAGAGTTAATACTAAATATAATTTAATTAAAAATTAGTTTAGTAAAATACATATATTAGTAATCATTTTATTAACGAATATATCAATTCAAAATGTAACAAGTAAAAGCAAACGGAGAAAATAATTTTGATATTGTAGGTTTATAGTAATAATCAATTAATGTTTCGATTCCGCGTCTTGCTTTGAAGTTACGTATATACATGTTCTAGCTTGCATATTTTATTTCTTCCAGGTTTGTTTTTTTCCTTTGATACAATTTATTTATTTATATTTGTGCGTGCTAGCAATAAAATACTAATTAAATTAGGGATTGCATTACCTGTATGCAAATAACGCATAGGACGGCTAATTGATTTCAATGTTATGTAACACGTAGGACCCTCTCCGTCACTGCAAAAAAGTCTCCCCTCTTTGTTTGTGTGCTAAAAGGCTGGTAGGAATTAAATCTCTTGATCACTTTAACATTAACTTTGAAAAAAACAAATTAATTTTTTTTTACTAAAATATAAATTAAAATAATTTGTAAAACAATACAAAATAAATCTTTCAAATCTAACAGGCTGATTTCACAGTGTTTAACTATTATGTGTATTATTATTATTACTATTGTTATTATTATTATTTTTTATTCAATTAAGCAAGTAAAAAAATATTTTTAACGCGATTGAGGGATTAATTAATAATTCACTTTTAAGTGTAAGGTGTTTTCAGTATTCTCTTGAAAATTCAACGCTGAAATGAATCTTTAACCCGTTTAAAGTGAGGCTTAAATACTGCATAACATGTTTTATTCGGACCCTTTGGCTTCAAAAAGTTCATCTTGGATCCACTTCAAGAGTTTATTCCTATCCCTGCCAAACTTATTCTTTTTTTTTGCCCTCCCCCGGAGTTACCACCTTTTTGTTCTCTTGATGACTTGAATTCATAACTTTCGAATTGAAAGTGAAAGTTGCTTACTATTCGAGCAACTCCCTCTCGTCTGCCAAACTTATTCTTGATCACTGCCTAAGAAGTAAAAATATTTAATTAGCTCTCTGATAGTACTAGAATTCACTGTTTTGAAAAGTATCAGGTTTAACCCTTCCTGGTACTATTATAAAAGAAGCATATCAGGTAAGAGTTTCATTGAGGAAAAACATGCTTCAGAAATACTTCGATTTGTATATGGAAACTAGCAAAGAAGTTGAAAAATAGTCTGGCAAAACATTATAGTATAGGCATAACAATGTGTATTATTATTTCGAAATAGTTTTGTTTATTAAGCAGTATAACATTAGTAAGAAAGACAGATGTAATTCAGAAATGTAATGCTTCTGAAATCTTTTTACATATTTCGTAATTGTTATTGGCAAAACAATCACAGGCATACTACTTATATCGACAATGAATTAGAAGATTTCATTTCTATGCTAGTGAATTAGAACTTTGCCTTCCTTATCAATATAACTCTTCTCAAAGAAAGTTATACGGCATCTAGCTCCCATTGTGTACCAAAACAATAATGCTGCACTGGGAGATACGATTTGTTCCTTAATTCTTGCGTCTTGTTTCATAATGTTCCAGATGGATATAGTGAAGGATTTAACCGCTGGTACTGTTGGAGGAGCAGCACAATTGATAGTTGGGCACCCTTTTGATACCATCAAAGTCAAGCTCCAAAGCCAGCCTACTCCACTTCCAGGGCAACCTCCTAAGTATGCAGGGGCCATAGATGCTGTCAGGAAAACAGTGGCCTCTGAAGGTCCAAGGGGGTTATACAAAGGCATGGGAGCTCCACTTGCCACTGTAGCCGCCTTCAACGCTTTGCTTTTCACTGTTAGAGGTCAAACTGAGGCCCTGTTAAGGTCTGAACCGGGAGCTCCTCTTACTGTCAAGCAACAAATCCTTTGTGGGGCTGTTGCTGGAACTGCTGCATCATTTCTTGCCTGCCCGACTGAACTCATAAAATGCAGGTATGCTCGTTAATGCATCCAATTTAGAAATATAGTACTCCCTGTCTTAATTTGTCTGAAACTGCAAGTGTTAATTTGACTGATATTGAAAGTTAAACTGAACTAGATTAAATTATTTTTAAAAACCAATATGGATATTTAGAAACTAAACATACTATAATTCACGATTGACCTATATCAAGATCGTAAAATAATACATTATAAAATGTTAGTCAAAGTTCAGTAACCTTTGAAAATGAATAGTAGTAATGAATTCACATGAGAGCTAATATCGTGCCTGTTTTCGAATCCTGCATCCTGAATCTCCATATGTCCAGTACAACAGGTTCACTTTTTTTGGACAAGAGTCTAGACTATAGATGGCAAAAATACTTTGGTGCAGAGGGATTAGCATATGTCTTCTTATATCTAAACTAGCTCCGTAAACTAATACAGTAACTTATAATAGATGAGCCCGTTATCCTTATGTTCTAAACTCGCTTCTTGGTACAAGGGGAGAGGCAAAGATACCCGCTTTAAAATGGAATCTTTTCAAGTGTTTGTAAATTTTCCTCAGCCCCTTTTGTATTAACCGTCAGGTTGACTGGTTGGAACAGGAACTCATCGTTCTGCTTTTCTTTCCGCCAGTGTAGTATACATGTGTTTTGCAGTTGGACTCTATTACTGTAAAAACTATTTGTATTGTTTCATCTATATTAGCAAATTAACTGTTGATTCTCAAATGTGAGTGCAGGTTGCAAGCGCACAGCGCATTGGCAAGTGTAGGATCAGCCTCTGCGGCCATAAAGTATACAGGGCCAATGGATGTTGCAAGACACGTTCTCCGTTCAGAAGGAGGTGTAAGGGGTCTCTTCAAGGGTATGTGCCCCACCCTGGCACGAGAAGTACCGGGAAATGCTGTTATGTTTG</genome_strand>
        <mrna_strand>TTGCCTAATTTGGTGCTGCTTGAGATCTGCTTCAATCTCTCCCATTTCCATCTTCTTACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATATAGTGAAGGATTTAACCGCTGGTACTGTTGGAGGAGCAGCACAATTGATAGTTGGGCACCCTTTTGATACCATCAAAGTCAAGCTCCAAAGCCAGCCTACTCCACTTCCAGGGCAACCTCCTAAGTATGCAGGGGCCATAGATGCTGTCAGGAAAACAGTGGCCTCTGAAGGTCCAAGGGGGTTATACAAAGGCATGGGAGCTCCACTTGCCACTGTAGCCGCCTTCAACGCTTTGCTTTTCACTGTTAGAGGTCAAACTGAGGCCCTGTTAAGGTCTGAACCGGGAGCTCCTCTTACTGTCAAGCAACAAATCCTTTGTGGGGCTGTTGCTGGAACTGCTGCATCATTTCTTGCCTGCCCGACTGAACTCATAAAATGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAAGCGCACAGCGCATTGGCAAGTGTAGGATCAGCCTCTGCGGCCATAAAGTATACAGGGCCAATGGATGTTGCAAGACACGTTCTCCGTTCAGAAGGAGGTGTAAGGGGTCTCTTCAAGGGTATGTGCCCCCCCCTGGCACGAGAAATACCGGGAAATGCTGTTATGTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E202247" ref_strand="+" ref_description="SGN-E202247 [cLEC-6-E9]">
      <seq>tgcctaatttggtgctgcttgagatctgcttcaatctctcccatttccatcttcttacagatggatatagtgaaggatttaaccgctggtactgttggaggagcagcacaattgatagttgggcacccttttgataccatcaaagtcaagctccaaagccagcctactccacttccagggcaacctcctaagtatgcaggggccatagatgctgtcaggaaaacagtggcctctgaaggtccaagggggttatacaaaggcatgggagctccacttgccactgtagccgccttcaacgctttgcttttcactgttagaggtcaaactgaggccctgttaaggtctgaaccgggagctcctcttactgtcaagcaacaaatcctttgtggggctgttgctggaactgctgcatcatttcttgcctgcccgactgaactcataaaatgcaggttgcaagcgcacagcgcattggcaagtgtaggatcagcctctgcggccataaagtatacagggccaatggatgttgcaagacacgttctccgttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="86189" stop="90282"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86489" g_stop="86548" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86549" i_stop="88763" i_length="2215">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88764" g_stop="89152" g_length="389"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="449" r_length="389" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89153" i_stop="89885" i_length="733">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89886" g_stop="89982" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="546" r_length="97" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E202247" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E202247" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86489" e_stop="86548"/>
          <exon e_start="88764" e_stop="89152"/>
          <exon e_start="89886" e_stop="89982"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCCTAATTTGGTGCTGCTTGAGATCTGCTTCAATCTCTCCCATTTCCATCTTCTTACAGGTACGATTCACTATCTCTACATTCGCTGTTCCGTCACCGCTTCTCTTTTTCTGTTTAATTTATTGAATGGAGATGGAAGAAAGGAGATTTTGAAGGTTGGAGTCGGATCCAAAAATTTATACAGTTAATCAATTGAGCTACTAATTAACATCGAATTCAAATCTGGTTGCGTTTTAGCCATTCTATGTTAAAGAGAAAATCGATAGTCTCTGTTTCTAAAGAGACAGAGTCAGATTGCAGGCGAAGGTTTTTGATTTGCGTTGGGTTGGGTTGAATTTTTTATTATTAGTCTTCACTAACAACAATCAGTCATGTTATTAATTAGTTTTACTTGTGATTTTTCATTAGTACGGTTTTTGAAATTCCCATTATTGGAGAAACGGGACATGTTTTGAAGCCGGCGCATATTAAATTTTCATCATTTATTCACCTGCCATCTTAACGTCCCCATTTTATTTCCACCATTAAAGACTTAAACTTTACTAGGCGTCAAACAAAAAAATCATGAAAATTTTGTTTTGGTTTACTTTTACTCGTCCCTCTTAAATGAATTGTTATTTTTATTTTATATTGACGTATCAAGAAAAGATAATAAATAATATTTTTTCATATTAATTCAGTATTTAATATATTTTTTTAAAATTATTTTTTCAAGAGTTAATACTAAATATAATTTAATTAAAAATTAGTTTAGTAAAATACATATATTAGTAATCATTTTATTAACGAATATATCAATTCAAAATGTAACAAGTAAAAGCAAACGGAGAAAATAATTTTGATATTGTAGGTTTATAGTAATAATCAATTAATGTTTCGATTCCGCGTCTTGCTTTGAAGTTACGTATATACATGTTCTAGCTTGCATATTTTATTTCTTCCAGGTTTGTTTTTTTCCTTTGATACAATTTATTTATTTATATTTGTGCGTGCTAGCAATAAAATACTAATTAAATTAGGGATTGCATTACCTGTATGCAAATAACGCATAGGACGGCTAATTGATTTCAATGTTATGTAACACGTAGGACCCTCTCCGTCACTGCAAAAAAGTCTCCCCTCTTTGTTTGTGTGCTAAAAGGCTGGTAGGAATTAAATCTCTTGATCACTTTAACATTAACTTTGAAAAAAACAAATTAATTTTTTTTTACTAAAATATAAATTAAAATAATTTGTAAAACAATACAAAATAAATCTTTCAAATCTAACAGGCTGATTTCACAGTGTTTAACTATTATGTGTATTATTATTATTACTATTGTTATTATTATTATTTTTTATTCAATTAAGCAAGTAAAAAAATATTTTTAACGCGATTGAGGGATTAATTAATAATTCACTTTTAAGTGTAAGGTGTTTTCAGTATTCTCTTGAAAATTCAACGCTGAAATGAATCTTTAACCCGTTTAAAGTGAGGCTTAAATACTGCATAACATGTTTTATTCGGACCCTTTGGCTTCAAAAAGTTCATCTTGGATCCACTTCAAGAGTTTATTCCTATCCCTGCCAAACTTATTCTTTTTTTTTGCCCTCCCCCGGAGTTACCACCTTTTTGTTCTCTTGATGACTTGAATTCATAACTTTCGAATTGAAAGTGAAAGTTGCTTACTATTCGAGCAACTCCCTCTCGTCTGCCAAACTTATTCTTGATCACTGCCTAAGAAGTAAAAATATTTAATTAGCTCTCTGATAGTACTAGAATTCACTGTTTTGAAAAGTATCAGGTTTAACCCTTCCTGGTACTATTATAAAAGAAGCATATCAGGTAAGAGTTTCATTGAGGAAAAACATGCTTCAGAAATACTTCGATTTGTATATGGAAACTAGCAAAGAAGTTGAAAAATAGTCTGGCAAAACATTATAGTATAGGCATAACAATGTGTATTATTATTTCGAAATAGTTTTGTTTATTAAGCAGTATAACATTAGTAAGAAAGACAGATGTAATTCAGAAATGTAATGCTTCTGAAATCTTTTTACATATTTCGTAATTGTTATTGGCAAAACAATCACAGGCATACTACTTATATCGACAATGAATTAGAAGATTTCATTTCTATGCTAGTGAATTAGAACTTTGCCTTCCTTATCAATATAACTCTTCTCAAAGAAAGTTATACGGCATCTAGCTCCCATTGTGTACCAAAACAATAATGCTGCACTGGGAGATACGATTTGTTCCTTAATTCTTGCGTCTTGTTTCATAATGTTCCAGATGGATATAGTGAAGGATTTAACCGCTGGTACTGTTGGAGGAGCAGCACAATTGATAGTTGGGCACCCTTTTGATACCATCAAAGTCAAGCTCCAAAGCCAGCCTACTCCACTTCCAGGGCAACCTCCTAAGTATGCAGGGGCCATAGATGCTGTCAGGAAAACAGTGGCCTCTGAAGGTCCAAGGGGGTTATACAAAGGCATGGGAGCTCCACTTGCCACTGTAGCCGCCTTCAACGCTTTGCTTTTCACTGTTAGAGGTCAAACTGAGGCCCTGTTAAGGTCTGAACCGGGAGCTCCTCTTACTGTCAAGCAACAAATCCTTTGTGGGGCTGTTGCTGGAACTGCTGCATCATTTCTTGCCTGCCCGACTGAACTCATAAAATGCAGGTATGCTCGTTAATGCATCCAATTTAGAAATATAGTACTCCCTGTCTTAATTTGTCTGAAACTGCAAGTGTTAATTTGACTGATATTGAAAGTTAAACTGAACTAGATTAAATTATTTTTAAAAACCAATATGGATATTTAGAAACTAAACATACTATAATTCACGATTGACCTATATCAAGATCGTAAAATAATACATTATAAAATGTTAGTCAAAGTTCAGTAACCTTTGAAAATGAATAGTAGTAATGAATTCACATGAGAGCTAATATCGTGCCTGTTTTCGAATCCTGCATCCTGAATCTCCATATGTCCAGTACAACAGGTTCACTTTTTTTGGACAAGAGTCTAGACTATAGATGGCAAAAATACTTTGGTGCAGAGGGATTAGCATATGTCTTCTTATATCTAAACTAGCTCCGTAAACTAATACAGTAACTTATAATAGATGAGCCCGTTATCCTTATGTTCTAAACTCGCTTCTTGGTACAAGGGGAGAGGCAAAGATACCCGCTTTAAAATGGAATCTTTTCAAGTGTTTGTAAATTTTCCTCAGCCCCTTTTGTATTAACCGTCAGGTTGACTGGTTGGAACAGGAACTCATCGTTCTGCTTTTCTTTCCGCCAGTGTAGTATACATGTGTTTTGCAGTTGGACTCTATTACTGTAAAAACTATTTGTATTGTTTCATCTATATTAGCAAATTAACTGTTGATTCTCAAATGTGAGTGCAGGTTGCAAGCGCACAGCGCATTGGCAAGTGTAGGATCAGCCTCTGCGGCCATAAAGTATACAGGGCCAATGGATGTTGCAAGACACGTTCTCCGTTCA</genome_strand>
        <mrna_strand>TGCCTAATTTGGTGCTGCTTGAGATCTGCTTCAATCTCTCCCATTTCCATCTTCTTACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATATAGTGAAGGATTTAACCGCTGGTACTGTTGGAGGAGCAGCACAATTGATAGTTGGGCACCCTTTTGATACCATCAAAGTCAAGCTCCAAAGCCAGCCTACTCCACTTCCAGGGCAACCTCCTAAGTATGCAGGGGCCATAGATGCTGTCAGGAAAACAGTGGCCTCTGAAGGTCCAAGGGGGTTATACAAAGGCATGGGAGCTCCACTTGCCACTGTAGCCGCCTTCAACGCTTTGCTTTTCACTGTTAGAGGTCAAACTGAGGCCCTGTTAAGGTCTGAACCGGGAGCTCCTCTTACTGTCAAGCAACAAATCCTTTGTGGGGCTGTTGCTGGAACTGCTGCATCATTTCTTGCCTGCCCGACTGAACTCATAAAATGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAAGCGCACAGCGCATTGGCAAGTGTAGGATCAGCCTCTGCGGCCATAAAGTATACAGGGCCAATGGATGTTGCAAGACACGTTCTCCGTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E311831" ref_strand="+" ref_description="SGN-E311831 [cLEZ-9-H18]">
      <seq>tctgcttcaatctctcccatttccatcttcttacagatggatatagtgaaggatttaaccgctggtactgttggaggagcagcacaattgatagttgggcacccttttgataccatcaaagtcaagctccaaagccagcctactccacttccagggcaacctcctaagtatgcaggggccatagatgctgtcaggaaaacagtggcctctgaaggtccaagggggttatacaaaggcatgggagctccacttgccactgtagccgccttcaacgctttgcttttcactgttagaggtcaaactgaggccctgttaaggtctgaaccgggagctcctcttactgtcaagcaacaaatcctttgtggggctgttgctggaactgctgcatcatttcttgcctgcccgactgaactcataaaatgcaggttgcaagcgcacagcgcattggcaagtgtaggatcagcctctgcggccataaagtatacagggccaatggatgttgcaagacacgttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="86213" stop="90274"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86513" g_stop="86548" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86549" i_stop="88763" i_length="2215">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88764" g_stop="89152" g_length="389"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="425" r_length="389" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89153" i_stop="89885" i_length="733">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89886" g_stop="89974" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="426" r_stop="514" r_length="89" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E311831" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>514</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E311831" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86513" e_stop="86548"/>
          <exon e_start="88764" e_stop="89152"/>
          <exon e_start="89886" e_stop="89974"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGCTTCAATCTCTCCCATTTCCATCTTCTTACAGGTACGATTCACTATCTCTACATTCGCTGTTCCGTCACCGCTTCTCTTTTTCTGTTTAATTTATTGAATGGAGATGGAAGAAAGGAGATTTTGAAGGTTGGAGTCGGATCCAAAAATTTATACAGTTAATCAATTGAGCTACTAATTAACATCGAATTCAAATCTGGTTGCGTTTTAGCCATTCTATGTTAAAGAGAAAATCGATAGTCTCTGTTTCTAAAGAGACAGAGTCAGATTGCAGGCGAAGGTTTTTGATTTGCGTTGGGTTGGGTTGAATTTTTTATTATTAGTCTTCACTAACAACAATCAGTCATGTTATTAATTAGTTTTACTTGTGATTTTTCATTAGTACGGTTTTTGAAATTCCCATTATTGGAGAAACGGGACATGTTTTGAAGCCGGCGCATATTAAATTTTCATCATTTATTCACCTGCCATCTTAACGTCCCCATTTTATTTCCACCATTAAAGACTTAAACTTTACTAGGCGTCAAACAAAAAAATCATGAAAATTTTGTTTTGGTTTACTTTTACTCGTCCCTCTTAAATGAATTGTTATTTTTATTTTATATTGACGTATCAAGAAAAGATAATAAATAATATTTTTTCATATTAATTCAGTATTTAATATATTTTTTTAAAATTATTTTTTCAAGAGTTAATACTAAATATAATTTAATTAAAAATTAGTTTAGTAAAATACATATATTAGTAATCATTTTATTAACGAATATATCAATTCAAAATGTAACAAGTAAAAGCAAACGGAGAAAATAATTTTGATATTGTAGGTTTATAGTAATAATCAATTAATGTTTCGATTCCGCGTCTTGCTTTGAAGTTACGTATATACATGTTCTAGCTTGCATATTTTATTTCTTCCAGGTTTGTTTTTTTCCTTTGATACAATTTATTTATTTATATTTGTGCGTGCTAGCAATAAAATACTAATTAAATTAGGGATTGCATTACCTGTATGCAAATAACGCATAGGACGGCTAATTGATTTCAATGTTATGTAACACGTAGGACCCTCTCCGTCACTGCAAAAAAGTCTCCCCTCTTTGTTTGTGTGCTAAAAGGCTGGTAGGAATTAAATCTCTTGATCACTTTAACATTAACTTTGAAAAAAACAAATTAATTTTTTTTTACTAAAATATAAATTAAAATAATTTGTAAAACAATACAAAATAAATCTTTCAAATCTAACAGGCTGATTTCACAGTGTTTAACTATTATGTGTATTATTATTATTACTATTGTTATTATTATTATTTTTTATTCAATTAAGCAAGTAAAAAAATATTTTTAACGCGATTGAGGGATTAATTAATAATTCACTTTTAAGTGTAAGGTGTTTTCAGTATTCTCTTGAAAATTCAACGCTGAAATGAATCTTTAACCCGTTTAAAGTGAGGCTTAAATACTGCATAACATGTTTTATTCGGACCCTTTGGCTTCAAAAAGTTCATCTTGGATCCACTTCAAGAGTTTATTCCTATCCCTGCCAAACTTATTCTTTTTTTTTGCCCTCCCCCGGAGTTACCACCTTTTTGTTCTCTTGATGACTTGAATTCATAACTTTCGAATTGAAAGTGAAAGTTGCTTACTATTCGAGCAACTCCCTCTCGTCTGCCAAACTTATTCTTGATCACTGCCTAAGAAGTAAAAATATTTAATTAGCTCTCTGATAGTACTAGAATTCACTGTTTTGAAAAGTATCAGGTTTAACCCTTCCTGGTACTATTATAAAAGAAGCATATCAGGTAAGAGTTTCATTGAGGAAAAACATGCTTCAGAAATACTTCGATTTGTATATGGAAACTAGCAAAGAAGTTGAAAAATAGTCTGGCAAAACATTATAGTATAGGCATAACAATGTGTATTATTATTTCGAAATAGTTTTGTTTATTAAGCAGTATAACATTAGTAAGAAAGACAGATGTAATTCAGAAATGTAATGCTTCTGAAATCTTTTTACATATTTCGTAATTGTTATTGGCAAAACAATCACAGGCATACTACTTATATCGACAATGAATTAGAAGATTTCATTTCTATGCTAGTGAATTAGAACTTTGCCTTCCTTATCAATATAACTCTTCTCAAAGAAAGTTATACGGCATCTAGCTCCCATTGTGTACCAAAACAATAATGCTGCACTGGGAGATACGATTTGTTCCTTAATTCTTGCGTCTTGTTTCATAATGTTCCAGATGGATATAGTGAAGGATTTAACCGCTGGTACTGTTGGAGGAGCAGCACAATTGATAGTTGGGCACCCTTTTGATACCATCAAAGTCAAGCTCCAAAGCCAGCCTACTCCACTTCCAGGGCAACCTCCTAAGTATGCAGGGGCCATAGATGCTGTCAGGAAAACAGTGGCCTCTGAAGGTCCAAGGGGGTTATACAAAGGCATGGGAGCTCCACTTGCCACTGTAGCCGCCTTCAACGCTTTGCTTTTCACTGTTAGAGGTCAAACTGAGGCCCTGTTAAGGTCTGAACCGGGAGCTCCTCTTACTGTCAAGCAACAAATCCTTTGTGGGGCTGTTGCTGGAACTGCTGCATCATTTCTTGCCTGCCCGACTGAACTCATAAAATGCAGGTATGCTCGTTAATGCATCCAATTTAGAAATATAGTACTCCCTGTCTTAATTTGTCTGAAACTGCAAGTGTTAATTTGACTGATATTGAAAGTTAAACTGAACTAGATTAAATTATTTTTAAAAACCAATATGGATATTTAGAAACTAAACATACTATAATTCACGATTGACCTATATCAAGATCGTAAAATAATACATTATAAAATGTTAGTCAAAGTTCAGTAACCTTTGAAAATGAATAGTAGTAATGAATTCACATGAGAGCTAATATCGTGCCTGTTTTCGAATCCTGCATCCTGAATCTCCATATGTCCAGTACAACAGGTTCACTTTTTTTGGACAAGAGTCTAGACTATAGATGGCAAAAATACTTTGGTGCAGAGGGATTAGCATATGTCTTCTTATATCTAAACTAGCTCCGTAAACTAATACAGTAACTTATAATAGATGAGCCCGTTATCCTTATGTTCTAAACTCGCTTCTTGGTACAAGGGGAGAGGCAAAGATACCCGCTTTAAAATGGAATCTTTTCAAGTGTTTGTAAATTTTCCTCAGCCCCTTTTGTATTAACCGTCAGGTTGACTGGTTGGAACAGGAACTCATCGTTCTGCTTTTCTTTCCGCCAGTGTAGTATACATGTGTTTTGCAGTTGGACTCTATTACTGTAAAAACTATTTGTATTGTTTCATCTATATTAGCAAATTAACTGTTGATTCTCAAATGTGAGTGCAGGTTGCAAGCGCACAGCGCATTGGCAAGTGTAGGATCAGCCTCTGCGGCCATAAAGTATACAGGGCCAATGGATGTTGCAAGACACGTTC</genome_strand>
        <mrna_strand>TCTGCTTCAATCTCTCCCATTTCCATCTTCTTACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATATAGTGAAGGATTTAACCGCTGGTACTGTTGGAGGAGCAGCACAATTGATAGTTGGGCACCCTTTTGATACCATCAAAGTCAAGCTCCAAAGCCAGCCTACTCCACTTCCAGGGCAACCTCCTAAGTATGCAGGGGCCATAGATGCTGTCAGGAAAACAGTGGCCTCTGAAGGTCCAAGGGGGTTATACAAAGGCATGGGAGCTCCACTTGCCACTGTAGCCGCCTTCAACGCTTTGCTTTTCACTGTTAGAGGTCAAACTGAGGCCCTGTTAAGGTCTGAACCGGGAGCTCCTCTTACTGTCAAGCAACAAATCCTTTGTGGGGCTGTTGCTGGAACTGCTGCATCATTTCTTGCCTGCCCGACTGAACTCATAAAATGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAAGCGCACAGCGCATTGGCAAGTGTAGGATCAGCCTCTGCGGCCATAAAGTATACAGGGCCAATGGATGTTGCAAGACACGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E335633" ref_strand="+" ref_description="SGN-E335633 [cTOE-8-O10]">
      <seq>tgcttcaatctctcccatttccatcttcttacagatggatatagtgaaggatttaaccgctggtactgttggaggagcagcacaattgatagttgggcacccttttgataccatcaaagtcaagctccaaagccagcctactccacttccagggcaacctcctaagtatgcacgggccatagatgctgtcaggaaaacagtggcctctgaaggtccaagggggttatacaaaggcatgggagctccacttgccactgtagccgccttcaacgctttgcttttcactgttagaggtcaaactgaggccctgttaaggtctgaaccgggagctcctcttactgtcaagcaacaaatcctttgtggggctgttgctggaactgctgcatcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="86215" stop="89418"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86515" g_stop="86548" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="34" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86549" i_stop="88763" i_length="2215">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88764" g_stop="89118" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="389" r_length="355" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E335633" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>389</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E335633" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86515" e_stop="86548"/>
          <exon e_start="88764" e_stop="89118"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTTCAATCTCTCCCATTTCCATCTTCTTACAGGTACGATTCACTATCTCTACATTCGCTGTTCCGTCACCGCTTCTCTTTTTCTGTTTAATTTATTGAATGGAGATGGAAGAAAGGAGATTTTGAAGGTTGGAGTCGGATCCAAAAATTTATACAGTTAATCAATTGAGCTACTAATTAACATCGAATTCAAATCTGGTTGCGTTTTAGCCATTCTATGTTAAAGAGAAAATCGATAGTCTCTGTTTCTAAAGAGACAGAGTCAGATTGCAGGCGAAGGTTTTTGATTTGCGTTGGGTTGGGTTGAATTTTTTATTATTAGTCTTCACTAACAACAATCAGTCATGTTATTAATTAGTTTTACTTGTGATTTTTCATTAGTACGGTTTTTGAAATTCCCATTATTGGAGAAACGGGACATGTTTTGAAGCCGGCGCATATTAAATTTTCATCATTTATTCACCTGCCATCTTAACGTCCCCATTTTATTTCCACCATTAAAGACTTAAACTTTACTAGGCGTCAAACAAAAAAATCATGAAAATTTTGTTTTGGTTTACTTTTACTCGTCCCTCTTAAATGAATTGTTATTTTTATTTTATATTGACGTATCAAGAAAAGATAATAAATAATATTTTTTCATATTAATTCAGTATTTAATATATTTTTTTAAAATTATTTTTTCAAGAGTTAATACTAAATATAATTTAATTAAAAATTAGTTTAGTAAAATACATATATTAGTAATCATTTTATTAACGAATATATCAATTCAAAATGTAACAAGTAAAAGCAAACGGAGAAAATAATTTTGATATTGTAGGTTTATAGTAATAATCAATTAATGTTTCGATTCCGCGTCTTGCTTTGAAGTTACGTATATACATGTTCTAGCTTGCATATTTTATTTCTTCCAGGTTTGTTTTTTTCCTTTGATACAATTTATTTATTTATATTTGTGCGTGCTAGCAATAAAATACTAATTAAATTAGGGATTGCATTACCTGTATGCAAATAACGCATAGGACGGCTAATTGATTTCAATGTTATGTAACACGTAGGACCCTCTCCGTCACTGCAAAAAAGTCTCCCCTCTTTGTTTGTGTGCTAAAAGGCTGGTAGGAATTAAATCTCTTGATCACTTTAACATTAACTTTGAAAAAAACAAATTAATTTTTTTTTACTAAAATATAAATTAAAATAATTTGTAAAACAATACAAAATAAATCTTTCAAATCTAACAGGCTGATTTCACAGTGTTTAACTATTATGTGTATTATTATTATTACTATTGTTATTATTATTATTTTTTATTCAATTAAGCAAGTAAAAAAATATTTTTAACGCGATTGAGGGATTAATTAATAATTCACTTTTAAGTGTAAGGTGTTTTCAGTATTCTCTTGAAAATTCAACGCTGAAATGAATCTTTAACCCGTTTAAAGTGAGGCTTAAATACTGCATAACATGTTTTATTCGGACCCTTTGGCTTCAAAAAGTTCATCTTGGATCCACTTCAAGAGTTTATTCCTATCCCTGCCAAACTTATTCTTTTTTTTTGCCCTCCCCCGGAGTTACCACCTTTTTGTTCTCTTGATGACTTGAATTCATAACTTTCGAATTGAAAGTGAAAGTTGCTTACTATTCGAGCAACTCCCTCTCGTCTGCCAAACTTATTCTTGATCACTGCCTAAGAAGTAAAAATATTTAATTAGCTCTCTGATAGTACTAGAATTCACTGTTTTGAAAAGTATCAGGTTTAACCCTTCCTGGTACTATTATAAAAGAAGCATATCAGGTAAGAGTTTCATTGAGGAAAAACATGCTTCAGAAATACTTCGATTTGTATATGGAAACTAGCAAAGAAGTTGAAAAATAGTCTGGCAAAACATTATAGTATAGGCATAACAATGTGTATTATTATTTCGAAATAGTTTTGTTTATTAAGCAGTATAACATTAGTAAGAAAGACAGATGTAATTCAGAAATGTAATGCTTCTGAAATCTTTTTACATATTTCGTAATTGTTATTGGCAAAACAATCACAGGCATACTACTTATATCGACAATGAATTAGAAGATTTCATTTCTATGCTAGTGAATTAGAACTTTGCCTTCCTTATCAATATAACTCTTCTCAAAGAAAGTTATACGGCATCTAGCTCCCATTGTGTACCAAAACAATAATGCTGCACTGGGAGATACGATTTGTTCCTTAATTCTTGCGTCTTGTTTCATAATGTTCCAGATGGATATAGTGAAGGATTTAACCGCTGGTACTGTTGGAGGAGCAGCACAATTGATAGTTGGGCACCCTTTTGATACCATCAAAGTCAAGCTCCAAAGCCAGCCTACTCCACTTCCAGGGCAACCTCCTAAGTATGCAGGGGCCATAGATGCTGTCAGGAAAACAGTGGCCTCTGAAGGTCCAAGGGGGTTATACAAAGGCATGGGAGCTCCACTTGCCACTGTAGCCGCCTTCAACGCTTTGCTTTTCACTGTTAGAGGTCAAACTGAGGCCCTGTTAAGGTCTGAACCGGGAGCTCCTCTTACTGTCAAGCAACAAATCCTTTGTGGGGCTGTTGCTGGAACTGCTGCATCAT</genome_strand>
        <mrna_strand>TGCTTCAATCTCTCCCATTTCCATCTTCTTACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATATAGTGAAGGATTTAACCGCTGGTACTGTTGGAGGAGCAGCACAATTGATAGTTGGGCACCCTTTTGATACCATCAAAGTCAAGCTCCAAAGCCAGCCTACTCCACTTCCAGGGCAACCTCCTAAGTATGCACGGGCCATAGATGCTGTCAGGAAAACAGTGGCCTCTGAAGGTCCAAGGGGGTTATACAAAGGCATGGGAGCTCCACTTGCCACTGTAGCCGCCTTCAACGCTTTGCTTTTCACTGTTAGAGGTCAAACTGAGGCCCTGTTAAGGTCTGAACCGGGAGCTCCTCTTACTGTCAAGCAACAAATCCTTTGTGGGGCTGTTGCTGGAACTGCTGCATCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E263150" ref_strand="+" ref_description="SGN-E263150 [cLEG-62-M23]">
      <seq>tcttacagatggatatagtgaaggatttaaccgctggtactgttggaggagcagcacaattgatagttgggcacccttttgataccatcaaagtcaagctccaaagccagcctactccacttccagggcaacctcctaagtatgcaggggccatagatgctgtcaggaaaacagtggcctctgaaggtccaagggggttatacaaaggcatgggagctccacttgccactgtagccgccttcaacgctttgcttttcactgttagaggtcaaactgaggccctgttaaggtctgaaccgggagctcctcttactgtcaagcaacaaatcctttgtggggctgttgctggaactgctgcatcatttcttgcctgcccgactgaactcataaaatgcaggttgcaagcgcacagcgcattggcaagtgtaggatcagcctctgcggccataaagtatacagggccaatggatgttgcaagacacgttctccgttcagaaggaggtgtaaggggtctcttcaagggtatgtgccccaccctggcacgagaagtaccgggaaatgctgttatggttggggtatatgaagcgttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="88456" stop="90379"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88756" g_stop="89152" g_length="397"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="397" r_length="397" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89153" i_stop="89885" i_length="733">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89886" g_stop="90079" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="591" r_length="194" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E263150" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E263150" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88756" e_stop="89152"/>
          <exon e_start="89886" e_stop="90079"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTCCAGATGGATATAGTGAAGGATTTAACCGCTGGTACTGTTGGAGGAGCAGCACAATTGATAGTTGGGCACCCTTTTGATACCATCAAAGTCAAGCTCCAAAGCCAGCCTACTCCACTTCCAGGGCAACCTCCTAAGTATGCAGGGGCCATAGATGCTGTCAGGAAAACAGTGGCCTCTGAAGGTCCAAGGGGGTTATACAAAGGCATGGGAGCTCCACTTGCCACTGTAGCCGCCTTCAACGCTTTGCTTTTCACTGTTAGAGGTCAAACTGAGGCCCTGTTAAGGTCTGAACCGGGAGCTCCTCTTACTGTCAAGCAACAAATCCTTTGTGGGGCTGTTGCTGGAACTGCTGCATCATTTCTTGCCTGCCCGACTGAACTCATAAAATGCAGGTATGCTCGTTAATGCATCCAATTTAGAAATATAGTACTCCCTGTCTTAATTTGTCTGAAACTGCAAGTGTTAATTTGACTGATATTGAAAGTTAAACTGAACTAGATTAAATTATTTTTAAAAACCAATATGGATATTTAGAAACTAAACATACTATAATTCACGATTGACCTATATCAAGATCGTAAAATAATACATTATAAAATGTTAGTCAAAGTTCAGTAACCTTTGAAAATGAATAGTAGTAATGAATTCACATGAGAGCTAATATCGTGCCTGTTTTCGAATCCTGCATCCTGAATCTCCATATGTCCAGTACAACAGGTTCACTTTTTTTGGACAAGAGTCTAGACTATAGATGGCAAAAATACTTTGGTGCAGAGGGATTAGCATATGTCTTCTTATATCTAAACTAGCTCCGTAAACTAATACAGTAACTTATAATAGATGAGCCCGTTATCCTTATGTTCTAAACTCGCTTCTTGGTACAAGGGGAGAGGCAAAGATACCCGCTTTAAAATGGAATCTTTTCAAGTGTTTGTAAATTTTCCTCAGCCCCTTTTGTATTAACCGTCAGGTTGACTGGTTGGAACAGGAACTCATCGTTCTGCTTTTCTTTCCGCCAGTGTAGTATACATGTGTTTTGCAGTTGGACTCTATTACTGTAAAAACTATTTGTATTGTTTCATCTATATTAGCAAATTAACTGTTGATTCTCAAATGTGAGTGCAGGTTGCAAGCGCACAGCGCATTGGCAAGTGTAGGATCAGCCTCTGCGGCCATAAAGTATACAGGGCCAATGGATGTTGCAAGACACGTTCTCCGTTCAGAAGGAGGTGTAAGGGGTCTCTTCAAGGGTATGTGCCCCACCCTGGCACGAGAAGTACCGGGAAATGCTGTTATGTTTGGTGTATATGAAGCGTTAA</genome_strand>
        <mrna_strand>TCTTACAGATGGATATAGTGAAGGATTTAACCGCTGGTACTGTTGGAGGAGCAGCACAATTGATAGTTGGGCACCCTTTTGATACCATCAAAGTCAAGCTCCAAAGCCAGCCTACTCCACTTCCAGGGCAACCTCCTAAGTATGCAGGGGCCATAGATGCTGTCAGGAAAACAGTGGCCTCTGAAGGTCCAAGGGGGTTATACAAAGGCATGGGAGCTCCACTTGCCACTGTAGCCGCCTTCAACGCTTTGCTTTTCACTGTTAGAGGTCAAACTGAGGCCCTGTTAAGGTCTGAACCGGGAGCTCCTCTTACTGTCAAGCAACAAATCCTTTGTGGGGCTGTTGCTGGAACTGCTGCATCATTTCTTGCCTGCCCGACTGAACTCATAAAATGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAAGCGCACAGCGCATTGGCAAGTGTAGGATCAGCCTCTGCGGCCATAAAGTATACAGGGCCAATGGATGTTGCAAGACACGTTCTCCGTTCAGAAGGAGGTGTAAGGGGTCTCTTCAAGGGTATGTGCCCCACCCTGGCACGAGAAGTACCGGGAAATGCTGTTATGGTTGGGGTATATGAAGCGTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E259252" ref_strand="+" ref_description="SGN-E259252 [cLEG-43-P21]">
      <seq>gatttaaccgctggtactgttggaggagcagcacaattgatagttgggcacccttttgataccatcaaagtcaagctccaaagccagcctactccacttccagggcaacctcctaagtatgcaggggccatagatgctgtcaggaaaacagtggcctctgaaggtccaagggggttatacaaaggcatgggagctccacttgccactgtagccgccttcaacgctttgcttttcactgttagaggtcaaactgaggccctgttaaggtctgaaccgggagctcctcttactgtcaagcaacaaatcctttgtggggctgttgctggaactgctgcatcatttcttgcctgcccgactgaactcataaaatgcaggttgcaagcgcacagcgcattggcaagtgtaggatcagcctctgcggccataaagtatacagggccaatggatgttgcaagacacgttctccgttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="88479" stop="90282"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88779" g_stop="89152" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="374" r_length="374" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89153" i_stop="89885" i_length="733">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89886" g_stop="89982" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="471" r_length="97" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E259252" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E259252" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88779" e_stop="89152"/>
          <exon e_start="89886" e_stop="89982"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTTAACCGCTGGTACTGTTGGAGGAGCAGCACAATTGATAGTTGGGCACCCTTTTGATACCATCAAAGTCAAGCTCCAAAGCCAGCCTACTCCACTTCCAGGGCAACCTCCTAAGTATGCAGGGGCCATAGATGCTGTCAGGAAAACAGTGGCCTCTGAAGGTCCAAGGGGGTTATACAAAGGCATGGGAGCTCCACTTGCCACTGTAGCCGCCTTCAACGCTTTGCTTTTCACTGTTAGAGGTCAAACTGAGGCCCTGTTAAGGTCTGAACCGGGAGCTCCTCTTACTGTCAAGCAACAAATCCTTTGTGGGGCTGTTGCTGGAACTGCTGCATCATTTCTTGCCTGCCCGACTGAACTCATAAAATGCAGGTATGCTCGTTAATGCATCCAATTTAGAAATATAGTACTCCCTGTCTTAATTTGTCTGAAACTGCAAGTGTTAATTTGACTGATATTGAAAGTTAAACTGAACTAGATTAAATTATTTTTAAAAACCAATATGGATATTTAGAAACTAAACATACTATAATTCACGATTGACCTATATCAAGATCGTAAAATAATACATTATAAAATGTTAGTCAAAGTTCAGTAACCTTTGAAAATGAATAGTAGTAATGAATTCACATGAGAGCTAATATCGTGCCTGTTTTCGAATCCTGCATCCTGAATCTCCATATGTCCAGTACAACAGGTTCACTTTTTTTGGACAAGAGTCTAGACTATAGATGGCAAAAATACTTTGGTGCAGAGGGATTAGCATATGTCTTCTTATATCTAAACTAGCTCCGTAAACTAATACAGTAACTTATAATAGATGAGCCCGTTATCCTTATGTTCTAAACTCGCTTCTTGGTACAAGGGGAGAGGCAAAGATACCCGCTTTAAAATGGAATCTTTTCAAGTGTTTGTAAATTTTCCTCAGCCCCTTTTGTATTAACCGTCAGGTTGACTGGTTGGAACAGGAACTCATCGTTCTGCTTTTCTTTCCGCCAGTGTAGTATACATGTGTTTTGCAGTTGGACTCTATTACTGTAAAAACTATTTGTATTGTTTCATCTATATTAGCAAATTAACTGTTGATTCTCAAATGTGAGTGCAGGTTGCAAGCGCACAGCGCATTGGCAAGTGTAGGATCAGCCTCTGCGGCCATAAAGTATACAGGGCCAATGGATGTTGCAAGACACGTTCTCCGTTCA</genome_strand>
        <mrna_strand>GATTTAACCGCTGGTACTGTTGGAGGAGCAGCACAATTGATAGTTGGGCACCCTTTTGATACCATCAAAGTCAAGCTCCAAAGCCAGCCTACTCCACTTCCAGGGCAACCTCCTAAGTATGCAGGGGCCATAGATGCTGTCAGGAAAACAGTGGCCTCTGAAGGTCCAAGGGGGTTATACAAAGGCATGGGAGCTCCACTTGCCACTGTAGCCGCCTTCAACGCTTTGCTTTTCACTGTTAGAGGTCAAACTGAGGCCCTGTTAAGGTCTGAACCGGGAGCTCCTCTTACTGTCAAGCAACAAATCCTTTGTGGGGCTGTTGCTGGAACTGCTGCATCATTTCTTGCCTGCCCGACTGAACTCATAAAATGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAAGCGCACAGCGCATTGGCAAGTGTAGGATCAGCCTCTGCGGCCATAAAGTATACAGGGCCAATGGATGTTGCAAGACACGTTCTCCGTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E247591" ref_strand="+" ref_description="SGN-E247591 [cLEF-42-L3]">
      <seq>tggtactgttggaggagcagcacaattgatagttgggcacccttttgataccatcaaagtcaagctccaaagccagcctactccacttccagggcaacctcctaagtatgcaggggccatagatgctgtcaggaaaacagtggcctctgaaggtccaagggggttatacaaaggcatgggagctccacttgccactgtagccgccttcaacgctttgcttttcactgttagaggtcaaactgaggccctgttaaggtctgaaccgggagctcctcttactgtcaagcaacaaatcctttgtggggctgttgctggaactgctgcatcatttcttgcctgcccgactgaactcataaaatgcaggttgcaagcgcacagcgcattggcaagtgtaggatcagcctctgcggccataaagtatacagggccaatggatgttgcaagacacgttctccgttcagaaggaggtgtaaggggtctcttcaagggtatgtgccccaccctggcacgagaagtaccgggaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="88490" stop="90348"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88790" g_stop="89152" g_length="363"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="363" r_length="363" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89153" i_stop="89885" i_length="733">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89886" g_stop="90048" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="526" r_length="163" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E247591" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E247591" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88790" e_stop="89152"/>
          <exon e_start="89886" e_stop="90048"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTACTGTTGGAGGAGCAGCACAATTGATAGTTGGGCACCCTTTTGATACCATCAAAGTCAAGCTCCAAAGCCAGCCTACTCCACTTCCAGGGCAACCTCCTAAGTATGCAGGGGCCATAGATGCTGTCAGGAAAACAGTGGCCTCTGAAGGTCCAAGGGGGTTATACAAAGGCATGGGAGCTCCACTTGCCACTGTAGCCGCCTTCAACGCTTTGCTTTTCACTGTTAGAGGTCAAACTGAGGCCCTGTTAAGGTCTGAACCGGGAGCTCCTCTTACTGTCAAGCAACAAATCCTTTGTGGGGCTGTTGCTGGAACTGCTGCATCATTTCTTGCCTGCCCGACTGAACTCATAAAATGCAGGTATGCTCGTTAATGCATCCAATTTAGAAATATAGTACTCCCTGTCTTAATTTGTCTGAAACTGCAAGTGTTAATTTGACTGATATTGAAAGTTAAACTGAACTAGATTAAATTATTTTTAAAAACCAATATGGATATTTAGAAACTAAACATACTATAATTCACGATTGACCTATATCAAGATCGTAAAATAATACATTATAAAATGTTAGTCAAAGTTCAGTAACCTTTGAAAATGAATAGTAGTAATGAATTCACATGAGAGCTAATATCGTGCCTGTTTTCGAATCCTGCATCCTGAATCTCCATATGTCCAGTACAACAGGTTCACTTTTTTTGGACAAGAGTCTAGACTATAGATGGCAAAAATACTTTGGTGCAGAGGGATTAGCATATGTCTTCTTATATCTAAACTAGCTCCGTAAACTAATACAGTAACTTATAATAGATGAGCCCGTTATCCTTATGTTCTAAACTCGCTTCTTGGTACAAGGGGAGAGGCAAAGATACCCGCTTTAAAATGGAATCTTTTCAAGTGTTTGTAAATTTTCCTCAGCCCCTTTTGTATTAACCGTCAGGTTGACTGGTTGGAACAGGAACTCATCGTTCTGCTTTTCTTTCCGCCAGTGTAGTATACATGTGTTTTGCAGTTGGACTCTATTACTGTAAAAACTATTTGTATTGTTTCATCTATATTAGCAAATTAACTGTTGATTCTCAAATGTGAGTGCAGGTTGCAAGCGCACAGCGCATTGGCAAGTGTAGGATCAGCCTCTGCGGCCATAAAGTATACAGGGCCAATGGATGTTGCAAGACACGTTCTCCGTTCAGAAGGAGGTGTAAGGGGTCTCTTCAAGGGTATGTGCCCCACCCTGGCACGAGAAGTACCGGGAAAT</genome_strand>
        <mrna_strand>TGGTACTGTTGGAGGAGCAGCACAATTGATAGTTGGGCACCCTTTTGATACCATCAAAGTCAAGCTCCAAAGCCAGCCTACTCCACTTCCAGGGCAACCTCCTAAGTATGCAGGGGCCATAGATGCTGTCAGGAAAACAGTGGCCTCTGAAGGTCCAAGGGGGTTATACAAAGGCATGGGAGCTCCACTTGCCACTGTAGCCGCCTTCAACGCTTTGCTTTTCACTGTTAGAGGTCAAACTGAGGCCCTGTTAAGGTCTGAACCGGGAGCTCCTCTTACTGTCAAGCAACAAATCCTTTGTGGGGCTGTTGCTGGAACTGCTGCATCATTTCTTGCCTGCCCGACTGAACTCATAAAATGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAAGCGCACAGCGCATTGGCAAGTGTAGGATCAGCCTCTGCGGCCATAAAGTATACAGGGCCAATGGATGTTGCAAGACACGTTCTCCGTTCAGAAGGAGGTGTAAGGGGTCTCTTCAAGGGTATGTGCCCCACCCTGGCACGAGAAGTACCGGGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E704377" ref_strand="+" ref_description="SGN-E704377 [FA24AE04]">
      <seq>cgccttcaacgctttgcttttcactgttagaggtcaaactgaggccctgttaaggtctgaaccgggagctcctcttactgtcaagcaacaaatcctttgtggggctgttgctggaactgctgcatcatttcttgcctgcccgactgaactcataaaatgcaggttgcaagcgcacagcgcattggcaagtgtaggatcagcctctgcggccataaagtatacagggccaatggatgttgcaagacacgttctccgttcagaaggaggtgtaaggggtctcttcaagggtatgtgccccaccctggcacgagaagtaccgggaaatgctgttatgtttggtgtatatgaagcgttaaagcagtactttgcaggagggatggatacttctgggctaggaaggggttctcttatagtagctggaggcttggctggtggttcagtctggtttgcagtgtatccgacagatgttattaagagcgtaattcaagttgatgattatagaaacgcgaaatactctggctcttttgatgctcttaaaaagattttggcctcagaaggtgtcaaaggcctttacaaggggtttggacctgctataacgcgtagcatcccagcaaatgcagcttgcttcttggcatatgagatgactaggtctagtttgggataattgctccaatgttttaggacaattgtgttctcaaaattttttacaatatcattgtttcaagattaagaaggaaaattttgtgagcctagttctgttatcatacaaagccaaaataggaatatgttatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="88691" stop="90816"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88991" g_stop="89152" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="162" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89153" i_stop="89885" i_length="733">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89886" g_stop="90516" g_length="631"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="793" r_length="631" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E704377" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>793</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E704377" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88991" e_stop="89152"/>
          <exon e_start="89886" e_stop="90516"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCCTTCAACGCTTTGCTTTTCACTGTTAGAGGTCAAACTGAGGCCCTGTTAAGGTCTGAACCGGGAGCTCCTCTTACTGTCAAGCAACAAATCCTTTGTGGGGCTGTTGCTGGAACTGCTGCATCATTTCTTGCCTGCCCGACTGAACTCATAAAATGCAGGTATGCTCGTTAATGCATCCAATTTAGAAATATAGTACTCCCTGTCTTAATTTGTCTGAAACTGCAAGTGTTAATTTGACTGATATTGAAAGTTAAACTGAACTAGATTAAATTATTTTTAAAAACCAATATGGATATTTAGAAACTAAACATACTATAATTCACGATTGACCTATATCAAGATCGTAAAATAATACATTATAAAATGTTAGTCAAAGTTCAGTAACCTTTGAAAATGAATAGTAGTAATGAATTCACATGAGAGCTAATATCGTGCCTGTTTTCGAATCCTGCATCCTGAATCTCCATATGTCCAGTACAACAGGTTCACTTTTTTTGGACAAGAGTCTAGACTATAGATGGCAAAAATACTTTGGTGCAGAGGGATTAGCATATGTCTTCTTATATCTAAACTAGCTCCGTAAACTAATACAGTAACTTATAATAGATGAGCCCGTTATCCTTATGTTCTAAACTCGCTTCTTGGTACAAGGGGAGAGGCAAAGATACCCGCTTTAAAATGGAATCTTTTCAAGTGTTTGTAAATTTTCCTCAGCCCCTTTTGTATTAACCGTCAGGTTGACTGGTTGGAACAGGAACTCATCGTTCTGCTTTTCTTTCCGCCAGTGTAGTATACATGTGTTTTGCAGTTGGACTCTATTACTGTAAAAACTATTTGTATTGTTTCATCTATATTAGCAAATTAACTGTTGATTCTCAAATGTGAGTGCAGGTTGCAAGCGCACAGCGCATTGGCAAGTGTAGGATCAGCCTCTGCGGCCATAAAGTATACAGGGCCAATGGATGTTGCAAGACACGTTCTCCGTTCAGAAGGAGGTGTAAGGGGTCTCTTCAAGGGTATGTGCCCCACCCTGGCACGAGAAGTACCGGGAAATGCTGTTATGTTTGGTGTATATGAAGCGTTAAAGCAGTACTTTGCAGGAGGGATGGATACTTCTGGGCTAGGAAGGGGTTCTCTTATAGTAGCTGGAGGCTTGGCTGGTGGTTCAGTCTGGTTTGCAGTGTATCCGACAGATGTTATTAAGAGCGTAATTCAAGTTGATGATTATAGAAACGCGAAATACTCTGGCTCTTTTGATGCTCTTAAAAAGATTTTGGCCTCAGAAGGTGTCAAAGGCCTTTACAAGGGGTTTGGACCTGCTATAACGCGTAGCATCCCAGCAAATGCAGCTTGCTTCTTGGCATATGAGATGACTAGGTCTAGTTTGGGATAATTGCTCCAATGTTTTAGGACAATTGTGTTCTCAAAATTTTTTACAATATCATTGTTTCAAGATTAAGAAGGAAAATTTTGTGAGCCTAGTTCTGTTATCATACAAAGCCAAAATAGGAATATGTTATCA</genome_strand>
        <mrna_strand>CGCCTTCAACGCTTTGCTTTTCACTGTTAGAGGTCAAACTGAGGCCCTGTTAAGGTCTGAACCGGGAGCTCCTCTTACTGTCAAGCAACAAATCCTTTGTGGGGCTGTTGCTGGAACTGCTGCATCATTTCTTGCCTGCCCGACTGAACTCATAAAATGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAAGCGCACAGCGCATTGGCAAGTGTAGGATCAGCCTCTGCGGCCATAAAGTATACAGGGCCAATGGATGTTGCAAGACACGTTCTCCGTTCAGAAGGAGGTGTAAGGGGTCTCTTCAAGGGTATGTGCCCCACCCTGGCACGAGAAGTACCGGGAAATGCTGTTATGTTTGGTGTATATGAAGCGTTAAAGCAGTACTTTGCAGGAGGGATGGATACTTCTGGGCTAGGAAGGGGTTCTCTTATAGTAGCTGGAGGCTTGGCTGGTGGTTCAGTCTGGTTTGCAGTGTATCCGACAGATGTTATTAAGAGCGTAATTCAAGTTGATGATTATAGAAACGCGAAATACTCTGGCTCTTTTGATGCTCTTAAAAAGATTTTGGCCTCAGAAGGTGTCAAAGGCCTTTACAAGGGGTTTGGACCTGCTATAACGCGTAGCATCCCAGCAAATGCAGCTTGCTTCTTGGCATATGAGATGACTAGGTCTAGTTTGGGATAATTGCTCCAATGTTTTAGGACAATTGTGTTCTCAAAATTTTTTACAATATCATTGTTTCAAGATTAAGAAGGAAAATTTTGTGAGCCTAGTTCTGTTATCATACAAAGCCAAAATAGGAATATGTTATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E351520" ref_strand="+" ref_description="SGN-E351520 [cTOS-12-O7]">
      <seq>tactttgcaggagggatggatacttctgggctaggaaggggttctcttatagtagctggaggcttggctggtggttcagtctggtttgcagtgtatccgacagatgttattaagagcgtaattcaagttgatgattatagaaacgcgaaatactctggctcttttgatgctcttaaaaagattttggcctcagaaggtgtcaaaggcctttacaaggggtttggacctgctataacgcgtagcatcccagcaaatgcagcttgcttcttggcatatgagatgactaggtctagtttgggataattgctccaatgttttaggacaattgtgttctcaaaattttttacaatatcattgtttcaagattaagaaggaaaattttgtgagcctagttctgttatcatacaaagccaaaataggaatatgttatcacaatagttcccaatctctgttttcatcttcaggggctatttgtttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="89785" stop="90864"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90085" g_stop="90564" g_length="480"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="480" r_length="480" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E351520" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351520" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90085" e_stop="90564"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACTTTGCAGGAGGGATGGATACTTCTGGGCTAGGAAGGGGTTCTCTTATAGTAGCTGGAGGCTTGGCTGGTGGTTCAGTCTGGTTTGCAGTGTATCCGACAGATGTTATTAAGAGCGTAATTCAAGTTGATGATTATAGAAACGCGAAATACTCTGGCTCTTTTGATGCTCTTAAAAAGATTTTGGCCTCAGAAGGTGTCAAAGGCCTTTACAAGGGGTTTGGACCTGCTATAACGCGTAGCATCCCAGCAAATGCAGCTTGCTTCTTGGCATATGAGATGACTAGGTCTAGTTTGGGATAATTGCTCCAATGTTTTAGGACAATTGTGTTCTCAAAATTTTTTACAATATCATTGTTTCAAGATTAAGAAGGAAAATTTTGTGAGCCTAGTTCTGTTATCATACAAAGCCAAAATAGGAATATGTTATCACAATAGTTCCCAATCTCTGTTTTCATCTTCAGTGTCTATTTGTTTTTT</genome_strand>
        <mrna_strand>TACTTTGCAGGAGGGATGGATACTTCTGGGCTAGGAAGGGGTTCTCTTATAGTAGCTGGAGGCTTGGCTGGTGGTTCAGTCTGGTTTGCAGTGTATCCGACAGATGTTATTAAGAGCGTAATTCAAGTTGATGATTATAGAAACGCGAAATACTCTGGCTCTTTTGATGCTCTTAAAAAGATTTTGGCCTCAGAAGGTGTCAAAGGCCTTTACAAGGGGTTTGGACCTGCTATAACGCGTAGCATCCCAGCAAATGCAGCTTGCTTCTTGGCATATGAGATGACTAGGTCTAGTTTGGGATAATTGCTCCAATGTTTTAGGACAATTGTGTTCTCAAAATTTTTTACAATATCATTGTTTCAAGATTAAGAAGGAAAATTTTGTGAGCCTAGTTCTGTTATCATACAAAGCCAAAATAGGAATATGTTATCACAATAGTTCCCAATCTCTGTTTTCATCTTCAGGGGCTATTTGTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E352134" ref_strand="+" ref_description="SGN-E352134 [cTOS-13-E17]">
      <seq>tggtggttcagtctggtttgcagtgtatccgacagatgttattaagagcgtaattcaagttgatgattatagaaacgcgaaatactctggctcttttgatgctcttaaaaagattttggcctcagaaggtgtcaaaggcctttacaaggggtttggacctgctataacgcgtagcatcccagcaaatgcagcttgcttcttggcatatgagatgactaggtctagtttgggataattgctccaatgttttaggacaattgtgttctcaaaattttttacaatatcattgtttcaagattaagaaggaaaattttgtgagcctagttctgttatcatacaaagccaaaataggaatatgttatcacaatagttcccaatctctgttttcatcttcagtgtctatttgttttttgttgttgttatgtcagatggattaaaaatcaaggagatggtaaatttcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="89853" stop="90915"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90153" g_stop="90615" g_length="463"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="463" r_length="463" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E352134" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>463</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352134" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90153" e_stop="90615"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTGGTTCAGTCTGGTTTGCAGTGTATCCGACAGATGTTATTAAGAGCGTAATTCAAGTTGATGATTATAGAAACGCGAAATACTCTGGCTCTTTTGATGCTCTTAAAAAGATTTTGGCCTCAGAAGGTGTCAAAGGCCTTTACAAGGGGTTTGGACCTGCTATAACGCGTAGCATCCCAGCAAATGCAGCTTGCTTCTTGGCATATGAGATGACTAGGTCTAGTTTGGGATAATTGCTCCAATGTTTTAGGACAATTGTGTTCTCAAAATTTTTTACAATATCATTGTTTCAAGATTAAGAAGGAAAATTTTGTGAGCCTAGTTCTGTTATCATACAAAGCCAAAATAGGAATATGTTATCACAATAGTTCCCAATCTCTGTTTTCATCTTCAGTGTCTATTTGTTTTTTGTTGTTGTTATGTCAGATGGATTAAAAATCAAGGAGATGGTAAATTTCATT</genome_strand>
        <mrna_strand>TGGTGGTTCAGTCTGGTTTGCAGTGTATCCGACAGATGTTATTAAGAGCGTAATTCAAGTTGATGATTATAGAAACGCGAAATACTCTGGCTCTTTTGATGCTCTTAAAAAGATTTTGGCCTCAGAAGGTGTCAAAGGCCTTTACAAGGGGTTTGGACCTGCTATAACGCGTAGCATCCCAGCAAATGCAGCTTGCTTCTTGGCATATGAGATGACTAGGTCTAGTTTGGGATAATTGCTCCAATGTTTTAGGACAATTGTGTTCTCAAAATTTTTTACAATATCATTGTTTCAAGATTAAGAAGGAAAATTTTGTGAGCCTAGTTCTGTTATCATACAAAGCCAAAATAGGAATATGTTATCACAATAGTTCCCAATCTCTGTTTTCATCTTCAGTGTCTATTTGTTTTTTGTTGTTGTTATGTCAGATGGATTAAAAATCAAGGAGATGGTAAATTTCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E351453" ref_strand="+" ref_description="SGN-E351453 [cTOS-12-F12]">
      <seq>agatgttattaagagcgtaattcaagttgatgattatagaaacgcgaaatactctggctcttttgatgctcttaaaaagattttggcctcagaaggtgtcaaaggcctttacaaggggtttggacctgctataacgcgtagcatcccagcaaatgcagcttgcttcttggcatatgagatgactaggtctagtttgggataattgctccaatgttttaggacaattgtgttctcaaaattttttacaatatcattgtttcaagattaagaaggaaaattttgtgagcctagttctgttatcatacaaagccaaaataggaatatgttatcacaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="89886" stop="90821"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90186" g_stop="90527" g_length="342"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="342" r_length="342" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E351453" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>342</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351453" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90186" e_stop="90527"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATGTTATTAAGAGCGTAATTCAAGTTGATGATTATAGAAACGCGAAATACTCTGGCTCTTTTGATGCTCTTAAAAAGATTTTGGCCTCAGAAGGTGTCAAAGGCCTTTACAAGGGGTTTGGACCTGCTATAACGCGTAGCATCCCAGCAAATGCAGCTTGCTTCTTGGCATATGAGATGACTAGGTCTAGTTTGGGATAATTGCTCCAATGTTTTAGGACAATTGTGTTCTCAAAATTTTTTACAATATCATTGTTTCAAGATTAAGAAGGAAAATTTTGTGAGCCTAGTTCTGTTATCATACAAAGCCAAAATAGGAATATGTTATCACAATAGTTCCC</genome_strand>
        <mrna_strand>AGATGTTATTAAGAGCGTAATTCAAGTTGATGATTATAGAAACGCGAAATACTCTGGCTCTTTTGATGCTCTTAAAAAGATTTTGGCCTCAGAAGGTGTCAAAGGCCTTTACAAGGGGTTTGGACCTGCTATAACGCGTAGCATCCCAGCAAATGCAGCTTGCTTCTTGGCATATGAGATGACTAGGTCTAGTTTGGGATAATTGCTCCAATGTTTTAGGACAATTGTGTTCTCAAAATTTTTTACAATATCATTGTTTCAAGATTAAGAAGGAAAATTTTGTGAGCCTAGTTCTGTTATCATACAAAGCCAAAATAGGAATATGTTATCACAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E354445" ref_strand="+" ref_description="SGN-E354445 [cTOS-17-N13]">
      <seq>agatgttattaagagcgtaattcaagttgatgattatagaaacgcgaaatactctggctcttttgatgctcttaaaaagattttggcctcagaaggtgtcaaaggcctttacaaggggtttggacctgctataacgcgtagcatcccagcaaatgcagcttgcttcttggcatatgagatgactaggtctagtttgggataattgctccaatgttttaggacaattgtgttctcaaaattttttacaatatcattgtttcaagattaagaaggaaaattttgtgagcctagttctgttatcatacaaagccaaaataggaatatgttatcacaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="89886" stop="90821"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90186" g_stop="90527" g_length="342"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="342" r_length="342" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E354445" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>342</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354445" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90186" e_stop="90527"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATGTTATTAAGAGCGTAATTCAAGTTGATGATTATAGAAACGCGAAATACTCTGGCTCTTTTGATGCTCTTAAAAAGATTTTGGCCTCAGAAGGTGTCAAAGGCCTTTACAAGGGGTTTGGACCTGCTATAACGCGTAGCATCCCAGCAAATGCAGCTTGCTTCTTGGCATATGAGATGACTAGGTCTAGTTTGGGATAATTGCTCCAATGTTTTAGGACAATTGTGTTCTCAAAATTTTTTACAATATCATTGTTTCAAGATTAAGAAGGAAAATTTTGTGAGCCTAGTTCTGTTATCATACAAAGCCAAAATAGGAATATGTTATCACAATAGTTCCC</genome_strand>
        <mrna_strand>AGATGTTATTAAGAGCGTAATTCAAGTTGATGATTATAGAAACGCGAAATACTCTGGCTCTTTTGATGCTCTTAAAAAGATTTTGGCCTCAGAAGGTGTCAAAGGCCTTTACAAGGGGTTTGGACCTGCTATAACGCGTAGCATCCCAGCAAATGCAGCTTGCTTCTTGGCATATGAGATGACTAGGTCTAGTTTGGGATAATTGCTCCAATGTTTTAGGACAATTGTGTTCTCAAAATTTTTTACAATATCATTGTTTCAAGATTAAGAAGGAAAATTTTGTGAGCCTAGTTCTGTTATCATACAAAGCCAAAATAGGAATATGTTATCACAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E623249" ref_strand="+" ref_description="SGN-E623249 [88339]">
      <seq>tttttccccattttgcttgcctctctctttgtctaatggagcgatccgataactcaacgacccacgttcatcaggaagcagaagaagaaccaaacccaacccatcagttcacgcttcctcccggtttcacaccggaagaatccgatgagctcaattcaagtataaccgagttccactcctaccgagtcgactcatcccaatgttcttccctactcgcacaacgcatccacgcgccgcctcacgtcgtctggtccgtcgtccgctgtttcgaaaagcctcacatttacaagcacttcatcaaaagctgttccgtcggagagaacttctccatggtcgtgggtgccacgcgcaatgtcaacgtcatctccggcttaccggcgaatacaagtactgagaggctcgatttattggacgatgaaaagtacgttaccggattcagtataattggtggtgaacatagattgaagaattaccggtcagttactagtgtacatggattcgaacgcgatgggataatctggaccgttgttttggaatcgtacgtcgttgatgtgcctgaagggaatactgaagaagacactcgtctttttgctgatacagttgtgaaattgaatcttcagaaatttagcctccgtcgccgaagccatagctcgtggtggtaacggtgaggatctcctaaaatttcaaagtttaatttctcttcatcttaattttcttctttctttttccattggctgaaatcatggaaagatattggtgtttctaaaaaggctcatggaaagagaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="93780" stop="95165"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94080" g_stop="94865" g_length="786"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="787" r_length="787" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E623249" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>786</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E623249" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94080" e_stop="94865"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTGCCCATTTTGCTTGCCTCTTCTCTTTGTCTGATGGAGCAATCCGATAACTCAACGACCCACGTTCATCAGGAAGCAGAAGAAGAACCGAACCCGACCCATCAGTTCATGCTTCCTCCCGGTTTGACACCGGAAGAATCCGATGAGCTCAAATCAAGTGTAACCGACTTCCACTCCTACCAAGTCAACTCATCCCAATGTTCTTCTCTACTCGCACAACGCATCCACGCGCCGCCTCACGTCGTCTGGCCCGTCGTCCGTCGTTTCGAAAAGCCTCAGATATACAAGCACTTCATCAAAAGCTGTTCCGTCGCAGAGAATTTCTCCATGGTCGTGGGGGCCACGCGCGATGTCAACGTCATCTCCGGTTTACCGGCGAATACAAGCACGGAGAGGCTCGATTTATTGGACGACGAAAAGTACGTCACCGGTTTCAGTATAATTGGTGGTGAACATAGATTGAAGAATTACCGGTCAGTTACTAGTGTACATGGATTCGAACGCCATGGGAGAATCTGGACCGTTGTTTTGGAATCGTACGTCGTTGATGTGCCTGAAGGGAATACTGAAGAAGACACTCGTCTTTTTGCTGATACAGTTGTCAAATTGAATCTTCA-AAAATTAGCCTCCGTCGCCGAAGCCATAGCTCTTGGTGGTAACGGTGA-GATCTCATAAAATTTGAAGTTTGATTTATTTCTCTTCATCTTAATTTTCTTTTTTC-TTTTCCACGGGCTAAAATCATGGAAAAATATT-GTGTTTCTAAAAAAGTTCATGG-AAGATAAT</genome_strand>
        <mrna_strand>TTTTTCCCCATTTTGCTTGCCTC-TCTCTTTGTCTAATGGAGCGATCCGATAACTCAACGACCCACGTTCATCAGGAAGCAGAAGAAGAACCAAACCCAACCCATCAGTTCACGCTTCCTCCCGGTTTCACACCGGAAGAATCCGATGAGCTCAATTCAAGTATAACCGAGTTCCACTCCTACCGAGTCGACTCATCCCAATGTTCTTCCCTACTCGCACAACGCATCCACGCGCCGCCTCACGTCGTCTGGTCCGTCGTCCGCTGTTTCGAAAAGCCTCACATTTACAAGCACTTCATCAAAAGCTGTTCCGTCGGAGAGAACTTCTCCATGGTCGTGGGTGCCACGCGCAATGTCAACGTCATCTCCGGCTTACCGGCGAATACAAGTACTGAGAGGCTCGATTTATTGGACGATGAAAAGTACGTTACCGGATTCAGTATAATTGGTGGTGAACATAGATTGAAGAATTACCGGTCAGTTACTAGTGTACATGGATTCGAACGCGATGGGATAATCTGGACCGTTGTTTTGGAATCGTACGTCGTTGATGTGCCTGAAGGGAATACTGAAGAAGACACTCGTCTTTTTGCTGATACAGTTGTGAAATTGAATCTTCAGAAATTTAGCCTCCGTCGCCGAAGCCATAGCTCGTGGTGGTAACGGTGAGGATCTCCTAAAATTTCAA---AGTTTAATTTCTCTTCATCTTAATTTTCTTCTTTCTTTTTCCATTGGCTGAAATCATGGAAAGATATTGGTGTTTCTAAAAAGGCTCATGGAAAGAGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E548588" ref_strand="+" ref_description="SGN-E548588 [TUS-62-J10]">
      <seq>tttgcccattttgcttgcctcttctctttgtctgatggagcaatccgataactcaacgacccacgttcatcaggaagcagaagaagaaccgaacccgacccatcagttcatgcttcctcccggtttgacaccggaagaatccgatgagctcaaatcaagtgtaaccgacttccactcctaccaagtcaactcatcccaatgttcttctctactcgcacaacgcatccacgcgccgcctcacgtcgtctggcccgtcgtccgtcgtttcgaaaagcctcagatatacaagcacttcatcaaaagctgttccgtcgcagagaatttctccatggtcgtgggggccacgcgcgatgtcaacgtcatctccggtttaccggcgaatacaagcacggagaggctcgatttattggacgacgaaaagtacgtcaccggtttcagtataattggtggtgaacatagattgaagaattaccggtcagttactagtgtacatggattcgaacgccatgggagaatctggaccgttgttttggaatcgtacgtcgttgatgtgcctgaagggaatactgaagaagacactcgtctttttgctgatacagttgtcaaattgaatcttcaaaaattagcctccgtcgccgaagccatagctcttggtggtaacggtgagatctcataaaatttgaagtttgatttatttctcttcatcttaattttcttttttctttttcacgggcntaaatcatggaaaaatattgtgtttctaaaaaagttcatggaaagatatcagaacatatccttcacacgtaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="93782" stop="95189"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94082" g_stop="94889" g_length="808"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="808" r_length="808" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E548588" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>808</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E548588" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94082" e_stop="94889"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGCCCATTTTGCTTGCCTCTTCTCTTTGTCTGATGGAGCAATCCGATAACTCAACGACCCACGTTCATCAGGAAGCAGAAGAAGAACCGAACCCGACCCATCAGTTCATGCTTCCTCCCGGTTTGACACCGGAAGAATCCGATGAGCTCAAATCAAGTGTAACCGACTTCCACTCCTACCAAGTCAACTCATCCCAATGTTCTTCTCTACTCGCACAACGCATCCACGCGCCGCCTCACGTCGTCTGGCCCGTCGTCCGTCGTTTCGAAAAGCCTCAGATATACAAGCACTTCATCAAAAGCTGTTCCGTCGCAGAGAATTTCTCCATGGTCGTGGGGGCCACGCGCGATGTCAACGTCATCTCCGGTTTACCGGCGAATACAAGCACGGAGAGGCTCGATTTATTGGACGACGAAAAGTACGTCACCGGTTTCAGTATAATTGGTGGTGAACATAGATTGAAGAATTACCGGTCAGTTACTAGTGTACATGGATTCGAACGCCATGGGAGAATCTGGACCGTTGTTTTGGAATCGTACGTCGTTGATGTGCCTGAAGGGAATACTGAAGAAGACACTCGTCTTTTTGCTGATACAGTTGTCAAATTGAATCTTCAAAAATTAGCCTCCGTCGCCGAAGCCATAGCTCTTGGTGGTAACGGTGAGATCTCATAAAATTTGAAGTTTGATTTATTTCTCTTCATCTTAATTTTCTTTTTTCTTTTCCACGGGCTAAAATCATGGAAAAATATTGTGTTTCTAAAAAAGTTCATGGAAGATAATCAGAACATATCCTTCACACGTAAT</genome_strand>
        <mrna_strand>TTTGCCCATTTTGCTTGCCTCTTCTCTTTGTCTGATGGAGCAATCCGATAACTCAACGACCCACGTTCATCAGGAAGCAGAAGAAGAACCGAACCCGACCCATCAGTTCATGCTTCCTCCCGGTTTGACACCGGAAGAATCCGATGAGCTCAAATCAAGTGTAACCGACTTCCACTCCTACCAAGTCAACTCATCCCAATGTTCTTCTCTACTCGCACAACGCATCCACGCGCCGCCTCACGTCGTCTGGCCCGTCGTCCGTCGTTTCGAAAAGCCTCAGATATACAAGCACTTCATCAAAAGCTGTTCCGTCGCAGAGAATTTCTCCATGGTCGTGGGGGCCACGCGCGATGTCAACGTCATCTCCGGTTTACCGGCGAATACAAGCACGGAGAGGCTCGATTTATTGGACGACGAAAAGTACGTCACCGGTTTCAGTATAATTGGTGGTGAACATAGATTGAAGAATTACCGGTCAGTTACTAGTGTACATGGATTCGAACGCCATGGGAGAATCTGGACCGTTGTTTTGGAATCGTACGTCGTTGATGTGCCTGAAGGGAATACTGAAGAAGACACTCGTCTTTTTGCTGATACAGTTGTCAAATTGAATCTTCAAAAATTAGCCTCCGTCGCCGAAGCCATAGCTCTTGGTGGTAACGGTGAGATCTCATAAAATTTGAAGTTTGATTTATTTCTCTTCATCTTAATTTTCTTTTTTCTTTTTCACGGGCNTAAATCATGGAAAAATATTGTGTTTCTAAAAAAGTTCATGGAAAGATATCAGAACATATCCTTCACACGTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E299420" ref_strand="+" ref_description="SGN-E299420 [cLET-43-M20]">
      <seq>ttgcccattttgcttgcctcttctctttgtctgatggagcaatccgataactcaacgacccacgttcatcaggaagcagaagaagaaccgaacccgacccatcagttcatgcttcctcccggtttgacaccggaagaatccgatgagctcaaatcaagtgtaaccgacttccactcctaccaagtcaactcatcccaatgttcttctctactcgcacaacgcatccacgcgccgcctcacgtcgtctggcccgtcgtccgtcgtttcgaaaagcctcagatatacaagcacttcatcaaaagctgttccgtcgcagagaatttctccatggtcgtgggggccacgcgcgatgtcaacgtcatctccggtttaccggcgaatacaagcacggagaggctcgatttattggacgacgaaaagtacgtcaccggtttcagtataattggtggtgaacatagattgaagaattaccggtcagttactagtgtacatggattcgaacgccatgggaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="93783" stop="94895"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94083" g_stop="94595" g_length="513"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="513" r_length="513" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E299420" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E299420" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94083" e_stop="94595"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCCCATTTTGCTTGCCTCTTCTCTTTGTCTGATGGAGCAATCCGATAACTCAACGACCCACGTTCATCAGGAAGCAGAAGAAGAACCGAACCCGACCCATCAGTTCATGCTTCCTCCCGGTTTGACACCGGAAGAATCCGATGAGCTCAAATCAAGTGTAACCGACTTCCACTCCTACCAAGTCAACTCATCCCAATGTTCTTCTCTACTCGCACAACGCATCCACGCGCCGCCTCACGTCGTCTGGCCCGTCGTCCGTCGTTTCGAAAAGCCTCAGATATACAAGCACTTCATCAAAAGCTGTTCCGTCGCAGAGAATTTCTCCATGGTCGTGGGGGCCACGCGCGATGTCAACGTCATCTCCGGTTTACCGGCGAATACAAGCACGGAGAGGCTCGATTTATTGGACGACGAAAAGTACGTCACCGGTTTCAGTATAATTGGTGGTGAACATAGATTGAAGAATTACCGGTCAGTTACTAGTGTACATGGATTCGAACGCCATGGGAGA</genome_strand>
        <mrna_strand>TTGCCCATTTTGCTTGCCTCTTCTCTTTGTCTGATGGAGCAATCCGATAACTCAACGACCCACGTTCATCAGGAAGCAGAAGAAGAACCGAACCCGACCCATCAGTTCATGCTTCCTCCCGGTTTGACACCGGAAGAATCCGATGAGCTCAAATCAAGTGTAACCGACTTCCACTCCTACCAAGTCAACTCATCCCAATGTTCTTCTCTACTCGCACAACGCATCCACGCGCCGCCTCACGTCGTCTGGCCCGTCGTCCGTCGTTTCGAAAAGCCTCAGATATACAAGCACTTCATCAAAAGCTGTTCCGTCGCAGAGAATTTCTCCATGGTCGTGGGGGCCACGCGCGATGTCAACGTCATCTCCGGTTTACCGGCGAATACAAGCACGGAGAGGCTCGATTTATTGGACGACGAAAAGTACGTCACCGGTTTCAGTATAATTGGTGGTGAACATAGATTGAAGAATTACCGGTCAGTTACTAGTGTACATGGATTCGAACGCCATGGGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E706141" ref_strand="+" ref_description="SGN-E706141 [FA29AE08]">
      <seq>attttgcttgcctcttctctttgtctgatggagcaatccgataactcaacgacccacgttcatcaggaagcagaagaagaaccgaacccgacccatcagttcatgcttcctcccggtttgacaccggaagaatccgatgagctcaaatcaagtgtaaccgacttccactcctaccaagtcaactcatcccaatgttcttctctactcgcacaacgcatccacgcgccgcctcacgtcgtctggcccgtcgtccgtcgtttcgaaaagcctcagatatacaagcacttcatcaaaagctgttccgtcgcagagaatttctccatggtcgtgggggccacgcgcgatgtcaacgtcatctccggtttaccggcgaatacaagcacggagaggctcgatttattggacgacgaaaagtacgtcaccggtttcagtataattggtggtgaacatagattgaagaattaccggtcagttactagtgtacatggattcgaacgccatgggagaatctggaccgttgttttggaatcgtacgtcgttgatgtgcctgaagggaatactgaagaagacactcgtctttttgctgatacagttgtcaaattgaatcttcaaaaattagcctccgtcgccgaagccatagctcttggtggtaacggtgagatctcataaaatttgaagtttgatttatttctcttcatcttaattttcttttttcttttccacgggctaaaatcatggaaaaatattgtgtttctaaaaaagttcctggaagataatcagaacatatccttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="93789" stop="95181"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94089" g_stop="94881" g_length="793"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="793" r_length="793" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E706141" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>793</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E706141" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94089" e_stop="94881"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTGCTTGCCTCTTCTCTTTGTCTGATGGAGCAATCCGATAACTCAACGACCCACGTTCATCAGGAAGCAGAAGAAGAACCGAACCCGACCCATCAGTTCATGCTTCCTCCCGGTTTGACACCGGAAGAATCCGATGAGCTCAAATCAAGTGTAACCGACTTCCACTCCTACCAAGTCAACTCATCCCAATGTTCTTCTCTACTCGCACAACGCATCCACGCGCCGCCTCACGTCGTCTGGCCCGTCGTCCGTCGTTTCGAAAAGCCTCAGATATACAAGCACTTCATCAAAAGCTGTTCCGTCGCAGAGAATTTCTCCATGGTCGTGGGGGCCACGCGCGATGTCAACGTCATCTCCGGTTTACCGGCGAATACAAGCACGGAGAGGCTCGATTTATTGGACGACGAAAAGTACGTCACCGGTTTCAGTATAATTGGTGGTGAACATAGATTGAAGAATTACCGGTCAGTTACTAGTGTACATGGATTCGAACGCCATGGGAGAATCTGGACCGTTGTTTTGGAATCGTACGTCGTTGATGTGCCTGAAGGGAATACTGAAGAAGACACTCGTCTTTTTGCTGATACAGTTGTCAAATTGAATCTTCAAAAATTAGCCTCCGTCGCCGAAGCCATAGCTCTTGGTGGTAACGGTGAGATCTCATAAAATTTGAAGTTTGATTTATTTCTCTTCATCTTAATTTTCTTTTTTCTTTTCCACGGGCTAAAATCATGGAAAAATATTGTGTTTCTAAAAAAGTTCATGGAAGATAATCAGAACATATCCTTCA</genome_strand>
        <mrna_strand>ATTTTGCTTGCCTCTTCTCTTTGTCTGATGGAGCAATCCGATAACTCAACGACCCACGTTCATCAGGAAGCAGAAGAAGAACCGAACCCGACCCATCAGTTCATGCTTCCTCCCGGTTTGACACCGGAAGAATCCGATGAGCTCAAATCAAGTGTAACCGACTTCCACTCCTACCAAGTCAACTCATCCCAATGTTCTTCTCTACTCGCACAACGCATCCACGCGCCGCCTCACGTCGTCTGGCCCGTCGTCCGTCGTTTCGAAAAGCCTCAGATATACAAGCACTTCATCAAAAGCTGTTCCGTCGCAGAGAATTTCTCCATGGTCGTGGGGGCCACGCGCGATGTCAACGTCATCTCCGGTTTACCGGCGAATACAAGCACGGAGAGGCTCGATTTATTGGACGACGAAAAGTACGTCACCGGTTTCAGTATAATTGGTGGTGAACATAGATTGAAGAATTACCGGTCAGTTACTAGTGTACATGGATTCGAACGCCATGGGAGAATCTGGACCGTTGTTTTGGAATCGTACGTCGTTGATGTGCCTGAAGGGAATACTGAAGAAGACACTCGTCTTTTTGCTGATACAGTTGTCAAATTGAATCTTCAAAAATTAGCCTCCGTCGCCGAAGCCATAGCTCTTGGTGGTAACGGTGAGATCTCATAAAATTTGAAGTTTGATTTATTTCTCTTCATCTTAATTTTCTTTTTTCTTTTCCACGGGCTAAAATCATGGAAAAATATTGTGTTTCTAAAAAAGTTCCTGGAAGATAATCAGAACATATCCTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E461346" ref_strand="+" ref_description="SGN-E461346 [cPRO-8-I7]">
      <seq>cttaagcttggcttaaatggatcaaaattcgagctggattgatcactcaactcaggaagcagaagaagaaccaaacccaacccatcagttcacgcttcctcccggtttcacaccggaagaatccgatgagctcaattcaagtataaccgagttccactcctaccgagtcgactcatcccaatgttcttccctactcgcacaacgcatccacgcgccgcctcacgtcgtctggtccgtcgtccgctgtttcgaaaagcctcacatttacaagcacttcatcaaaagctgttccgtcggagagaacttctccatggtcgtgggtgccacgcgcaatgtcaacgtcatctccggcttaccggcgaatacaagtactgagaggctcgatttattggacgatgaaaagtacgttaccggattcagtataattggtggtgaacatagattgaagaattaccggtcagttactagtgtacatggattcgaacgcgatgggataatctggaccgttgttttggaatcgtacgtcgttgatgtgcctgaagggaatactgaagaagacactcgtctttttgctgatacagttgtgaaattgaatcttcagaaattagcctccgtcgccgaagccatagctcgtggtggtaacggtgagatctcctannnatttcagtttaatttctcttcatcctaattttcctctttctttccattgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="93848" stop="95056"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94155" g_stop="94814" g_length="660"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="710" r_length="655" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E461346" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="0.930" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E461346" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94155" e_stop="94814"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCAGAAGAAGAACCGAACCCGACCCATCAGTTCATGCTTCCTCCCGGTTTGACACCGGAAGAATCCGATGAGCTCAAATCAAGTGTAACCGACTTCCACTCCTACCAAGTCAACTCATCCCAATGTTCTTCTCTACTCGCACAACGCATCCACGCGCCGCCTCACGTCGTCTGGCCCGTCGTCCGTCGTTTCGAAAAGCCTCAGATATACAAGCACTTCATCAAAAGCTGTTCCGTCGCAGAGAATTTCTCCATGGTCGTGGGGGCCACGCGCGATGTCAACGTCATCTCCGGTTTACCGGCGAATACAAGCACGGAGAGGCTCGATTTATTGGACGACGAAAAGTACGTCACCGGTTTCAGTATAATTGGTGGTGAACATAGATTGAAGAATTACCGGTCAGTTACTAGTGTACATGGATTCGAACGCCATGGGAGAATCTGGACCGTTGTTTTGGAATCGTACGTCGTTGATGTGCCTGAAGGGAATACTGAAGAAGACACTCGTCTTTTTGCTGATACAGTTGTCAAATTGAATCTTCAAAAATTAGCCTCCGTCGCCGAAGCCATAGCTCTTGGTGGTAACGGTGAGATCTCATAAAATTTGAAGTTTGATTTATTTCTCTTCATCTTAATTTTCTTTTTTCTTTTCCACGGG</genome_strand>
        <mrna_strand>GAAGCAGAAGAAGAACCAAACCCAACCCATCAGTTCACGCTTCCTCCCGGTTTCACACCGGAAGAATCCGATGAGCTCAATTCAAGTATAACCGAGTTCCACTCCTACCGAGTCGACTCATCCCAATGTTCTTCCCTACTCGCACAACGCATCCACGCGCCGCCTCACGTCGTCTGGTCCGTCGTCCGCTGTTTCGAAAAGCCTCACATTTACAAGCACTTCATCAAAAGCTGTTCCGTCGGAGAGAACTTCTCCATGGTCGTGGGTGCCACGCGCAATGTCAACGTCATCTCCGGCTTACCGGCGAATACAAGTACTGAGAGGCTCGATTTATTGGACGATGAAAAGTACGTTACCGGATTCAGTATAATTGGTGGTGAACATAGATTGAAGAATTACCGGTCAGTTACTAGTGTACATGGATTCGAACGCGATGGGATAATCTGGACCGTTGTTTTGGAATCGTACGTCGTTGATGTGCCTGAAGGGAATACTGAAGAAGACACTCGTCTTTTTGCTGATACAGTTGTGAAATTGAATCTTCAGAAATTAGCCTCCGTCGCCGAAGCCATAGCTCGTGGTGGTAACGGTGAGATCTCCTANNNATTTCAGTTT-A---ATTTCTCTTCATCCTAATTTTCCTCTTTC-TTTCCATTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E435113" ref_strand="+" ref_description="SGN-E435113 [STM-61-C7]">
      <seq>cttaagcttggcttaaatggatcaaaattcgagctggattgatcactcaactcaggaagcagaagaagaaccaaacccaacccatcagttcacgcttcctcccggtttcacaccggaagaatccgatgagctcaattcaagtataaccgagttccactcctaccgagtcgactcatcccaatgttcttccctactcgcacaacgcatccacgcgccgcctcacgtcgtctggtccgtcgtccgctgtttcgaaaagcctcacatttacaagcacttcatcaaaagctgttccgtcggagagaacttctccatggtcgtgggtgccacgcgcaatgtcaacgtcatctccggcttaccggcgaatacaagtactgagaggctcgatttattggacgatgaaaagtacgttaccggattcagtataattggtggtgaacatagattgaagaattaccggtcagttactagtgtacatggattcgaacgcgatgggataatctggaccgttgttttggaatcgtacgtcgttgatgtgcctgaagggaatactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="93848" stop="94950"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94155" g_stop="94650" g_length="496"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="551" r_length="496" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E435113" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="0.900" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E435113" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94155" e_stop="94650"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCAGAAGAAGAACCGAACCCGACCCATCAGTTCATGCTTCCTCCCGGTTTGACACCGGAAGAATCCGATGAGCTCAAATCAAGTGTAACCGACTTCCACTCCTACCAAGTCAACTCATCCCAATGTTCTTCTCTACTCGCACAACGCATCCACGCGCCGCCTCACGTCGTCTGGCCCGTCGTCCGTCGTTTCGAAAAGCCTCAGATATACAAGCACTTCATCAAAAGCTGTTCCGTCGCAGAGAATTTCTCCATGGTCGTGGGGGCCACGCGCGATGTCAACGTCATCTCCGGTTTACCGGCGAATACAAGCACGGAGAGGCTCGATTTATTGGACGACGAAAAGTACGTCACCGGTTTCAGTATAATTGGTGGTGAACATAGATTGAAGAATTACCGGTCAGTTACTAGTGTACATGGATTCGAACGCCATGGGAGAATCTGGACCGTTGTTTTGGAATCGTACGTCGTTGATGTGCCTGAAGGGAATACTG</genome_strand>
        <mrna_strand>GAAGCAGAAGAAGAACCAAACCCAACCCATCAGTTCACGCTTCCTCCCGGTTTCACACCGGAAGAATCCGATGAGCTCAATTCAAGTATAACCGAGTTCCACTCCTACCGAGTCGACTCATCCCAATGTTCTTCCCTACTCGCACAACGCATCCACGCGCCGCCTCACGTCGTCTGGTCCGTCGTCCGCTGTTTCGAAAAGCCTCACATTTACAAGCACTTCATCAAAAGCTGTTCCGTCGGAGAGAACTTCTCCATGGTCGTGGGTGCCACGCGCAATGTCAACGTCATCTCCGGCTTACCGGCGAATACAAGTACTGAGAGGCTCGATTTATTGGACGATGAAAAGTACGTTACCGGATTCAGTATAATTGGTGGTGAACATAGATTGAAGAATTACCGGTCAGTTACTAGTGTACATGGATTCGAACGCGATGGGATAATCTGGACCGTTGTTTTGGAATCGTACGTCGTTGATGTGCCTGAAGGGAATACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E286327" ref_strand="+" ref_description="SGN-E286327 [cLES-11-K15]">
      <seq>aaccgaacccgacccatcagttcatgcttcctcccggtttgacaccggaagaatccgatgagctcaaatcaagtgtaaccgacttccactcctaccaagtcaactcatcccaatgttcttctctactcgcacaacgcatgcacgcgccgcctcacgtcgtctggcccgtcgtccgtcgtttcgaaaagcctcagatatacaagcacttcatcaaaagctgttccgtcgcagagaatttctccatggtcgtgggggccacgcgcgatgtcaacgtcatctccggtttaccggcgaatacaagcacggagaggctcgatttattggacgacgaaaagtacgtcaccggtttcagtataattggtggtgaacatagattgaagaattaccggtcagttactagtgtacatggattcgaacgccatgggagaatctggaccgttgttttggaatcgtacgtcgttgatgtgcctgaagggaatactgaagaagacactcgtctttttgctgatacagttgtcaaattgaatcttcaaaaattagcctccgtcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="93868" stop="95016"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94168" g_stop="94716" g_length="549"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="549" r_length="549" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E286327" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E286327" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94168" e_stop="94716"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCGAACCCGACCCATCAGTTCATGCTTCCTCCCGGTTTGACACCGGAAGAATCCGATGAGCTCAAATCAAGTGTAACCGACTTCCACTCCTACCAAGTCAACTCATCCCAATGTTCTTCTCTACTCGCACAACGCATCCACGCGCCGCCTCACGTCGTCTGGCCCGTCGTCCGTCGTTTCGAAAAGCCTCAGATATACAAGCACTTCATCAAAAGCTGTTCCGTCGCAGAGAATTTCTCCATGGTCGTGGGGGCCACGCGCGATGTCAACGTCATCTCCGGTTTACCGGCGAATACAAGCACGGAGAGGCTCGATTTATTGGACGACGAAAAGTACGTCACCGGTTTCAGTATAATTGGTGGTGAACATAGATTGAAGAATTACCGGTCAGTTACTAGTGTACATGGATTCGAACGCCATGGGAGAATCTGGACCGTTGTTTTGGAATCGTACGTCGTTGATGTGCCTGAAGGGAATACTGAAGAAGACACTCGTCTTTTTGCTGATACAGTTGTCAAATTGAATCTTCAAAAATTAGCCTCCGTCG</genome_strand>
        <mrna_strand>AACCGAACCCGACCCATCAGTTCATGCTTCCTCCCGGTTTGACACCGGAAGAATCCGATGAGCTCAAATCAAGTGTAACCGACTTCCACTCCTACCAAGTCAACTCATCCCAATGTTCTTCTCTACTCGCACAACGCATGCACGCGCCGCCTCACGTCGTCTGGCCCGTCGTCCGTCGTTTCGAAAAGCCTCAGATATACAAGCACTTCATCAAAAGCTGTTCCGTCGCAGAGAATTTCTCCATGGTCGTGGGGGCCACGCGCGATGTCAACGTCATCTCCGGTTTACCGGCGAATACAAGCACGGAGAGGCTCGATTTATTGGACGACGAAAAGTACGTCACCGGTTTCAGTATAATTGGTGGTGAACATAGATTGAAGAATTACCGGTCAGTTACTAGTGTACATGGATTCGAACGCCATGGGAGAATCTGGACCGTTGTTTTGGAATCGTACGTCGTTGATGTGCCTGAAGGGAATACTGAAGAAGACACTCGTCTTTTTGCTGATACAGTTGTCAAATTGAATCTTCAAAAATTAGCCTCCGTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E541672" ref_strand="+" ref_description="SGN-E541672 [TUS-62-J10](-)">
      <seq>tggcccgtcgtccgtcgtttcgaaaagcctcagatatacaagcacttcatcaaaagctgttccgtcgcagagaatttctccatggtcgtgggggccacgcgcgatgtcaacgtcatctccggtttaccggcgaatacaagcacggagaggctcgatttattggacgacgaaaagtacgtcaccggtttcagtataattggtggtgaacatagattgaagaattaccggtcagttactagtgtacatggattcgaacgccatgggagaatctggaccgttgttttggaatcgtacgtcgttgatgtgcctgaagggaatactgaagaagacactcgtctttttgctgatacagttgtcaaattgaatcttcaaaaattagcctccgtcgccgaagccatagctcttggtggtaacggtgagatctcataaaatttgaagtttgatttatttctcttcatcttaattttcttttttcttttccacgggctaaaatcatggaaaaatattgtgtttctaaaaaagttcatggaagataatcagaacatatccttcacacgtaattagattaattattcgtctggttgtgtactgggtcgagctgatgtaaagaatgaggaaatgatataagatgaagatgttgtatttctgtaattttattttatgaaaagaacaaaaagaaatcgttttaacttttttcaattatgggatcattgattaagttgaaatgagaagtttatttagattagtaaaaaagaaaaaaaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="+" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="94029" stop="95382"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94329" g_stop="95077" g_length="749"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="748" r_length="748" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="749" polyA_stop="765"/>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="+" ref_id="SGN-E541672" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>749</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E541672" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94329" e_stop="95077"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCCCGTCGTCCGTCGTTTCGAAAAGCCTCAGATATACAAGCACTTCATCAAAAGCTGTTCCGTCGCAGAGAATTTCTCCATGGTCGTGGGGGCCACGCGCGATGTCAACGTCATCTCCGGTTTACCGGCGAATACAAGCACGGAGAGGCTCGATTTATTGGACGACGAAAAGTACGTCACCGGTTTCAGTATAATTGGTGGTGAACATAGATTGAAGAATTACCGGTCAGTTACTAGTGTACATGGATTCGAACGCCATGGGAGAATCTGGACCGTTGTTTTGGAATCGTACGTCGTTGATGTGCCTGAAGGGAATACTGAAGAAGACACTCGTCTTTTTGCTGATACAGTTGTCAAATTGAATCTTCAAAAATTAGCCTCCGTCGCCGAAGCCATAGCTCTTGGTGGTAACGGTGAGATCTCATAAAATTTGAAGTTTGATTTATTTCTCTTCATCTTAATTTTCTTTTTTCTTTTCCACGGGCTAAAATCATGGAAAAATATTGTGTTTCTAAAAAAGTTCATGGAAGATAATCAGAACATATCCTTCACACGTAATTAGATTAATTATTCGTCTGGTTGTGTACTGGGTCGAGCTGATGTAAAGAATGAGGAAATGATATAAGATGAAGATGTTGTATTTCTGTAATTTTATTTTATGAAAAGAACAAAAAGAAATCGTTTTAACTTTTTTCAATTATGGGATCATTGATTAAGTTGAAATGAGAAGTTTATGTTAGATTAGTA</genome_strand>
        <mrna_strand>TGGCCCGTCGTCCGTCGTTTCGAAAAGCCTCAGATATACAAGCACTTCATCAAAAGCTGTTCCGTCGCAGAGAATTTCTCCATGGTCGTGGGGGCCACGCGCGATGTCAACGTCATCTCCGGTTTACCGGCGAATACAAGCACGGAGAGGCTCGATTTATTGGACGACGAAAAGTACGTCACCGGTTTCAGTATAATTGGTGGTGAACATAGATTGAAGAATTACCGGTCAGTTACTAGTGTACATGGATTCGAACGCCATGGGAGAATCTGGACCGTTGTTTTGGAATCGTACGTCGTTGATGTGCCTGAAGGGAATACTGAAGAAGACACTCGTCTTTTTGCTGATACAGTTGTCAAATTGAATCTTCAAAAATTAGCCTCCGTCGCCGAAGCCATAGCTCTTGGTGGTAACGGTGAGATCTCATAAAATTTGAAGTTTGATTTATTTCTCTTCATCTTAATTTTCTTTTTTCTTTTCCACGGGCTAAAATCATGGAAAAATATTGTGTTTCTAAAAAAGTTCATGGAAGATAATCAGAACATATCCTTCACACGTAATTAGATTAATTATTCGTCTGGTTGTGTACTGGGTCGAGCTGATGTAAAGAATGAGGAAATGATATAAGATGAAGATGTTGTATTTCTGTAATTTTATTTTATGAAAAGAACAAAAAGAAATCGTTTTAACTTTTTTCAATTATGGGATCATTGATTAAGTTGAAATGAGAAGTTTAT-TTAGATTAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E353601" ref_strand="+" ref_description="SGN-E353601 [cTOS-15-L14]">
      <seq>agccacacatcttttgtattcctctctttactcttgtaaatttgtacttttaagtcaaataaattttcagctgttcttgttatctgcttttgaagatctacttaaggtattattattattatttgaaaattatttttattctcgtctagcctaaatgataggctaaacacttactgacagattaatatcaacctaaactattgacaacatggaacttggactgttctggtgtttctaaggtcgaaatagtgtagttggagagtgggaagatcttggcttagtatggagttcctgttaaggcctatgttaagccatgtgtgaggcgttgtttgagctatgttgaaaccgtaaaagaccctttcattctcggactatctaactcataaacgaaccgatagttacatctaagcgatcctatcgtatttgattccaaatgttgagatttgtaaggctatgcggactagcgccagctttggaacttgagaatggatattacttattattattattattattatttataaacaatttgtgatagtaaagaaatatgtgaatgatagcaaaatataattacttatggatgtaaaatataaattaattttgtttcatttttttaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0024F02-jy1rv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0024F02.1" temp_strand="-" temp_description="C06HBa0024F02.1  AC211026.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0024F02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="96776" stop="95551"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96476" g_stop="95849" g_length="628"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="628" r_length="628" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0024F02.1" gen_strand="-" ref_id="SGN-E353601" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0024F02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353601" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96476" e_stop="95849"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCCACACATCTTTTGTATTCCTCTCTTTACTCTTGTAAATTTGTACTTTTAAGTCAAATAAATTTTCAGCTGTTCTTGTTATCTGCTTTTGAAGATCTACTTAAGGTATTATTATTATTATTTGAAAATTATTTTTATTCTCGTCTAGCCTAAATGATAGGCTAAACACTTACTGACAGATTAATATCAACCTAAACTATTGACAACATGGAACTTGGACTGTTCTGGTGTTTCTAAGGTCGAAATAGTGTAGTTGGAGAGTGGGAAGATCTTGGCTTAGTATGGAGTTCCTGTTAAGGCCTATGTTAAGCCATGTGTGAGGCGTTGTTTGAGCTATGTTGAAACCGTAAAAGACCCTTTCATTCTCGGACTATCTAACTCATAAACGAACCGATAGTTACATCTAAGCGATCCTATCGTATTTGATTCCAAATGTTGAGATTTGTAAGGCTATGCGGACTAGCGCCAGCTTTGGAACTTGAGAATGTATATTACTTATTATTATTATTATTATTATTTATAAACAATTTGTGATAGTAAAGAAATATGTGAATGATAGCAAAATATAATTACTTATGGATGTAAAATATAAATTAATTTTGTTTCATTTTTTTAAGTAAAAAAATC</genome_strand>
        <mrna_strand>AGCCACACATCTTTTGTATTCCTCTCTTTACTCTTGTAAATTTGTACTTTTAAGTCAAATAAATTTTCAGCTGTTCTTGTTATCTGCTTTTGAAGATCTACTTAAGGTATTATTATTATTATTTGAAAATTATTTTTATTCTCGTCTAGCCTAAATGATAGGCTAAACACTTACTGACAGATTAATATCAACCTAAACTATTGACAACATGGAACTTGGACTGTTCTGGTGTTTCTAAGGTCGAAATAGTGTAGTTGGAGAGTGGGAAGATCTTGGCTTAGTATGGAGTTCCTGTTAAGGCCTATGTTAAGCCATGTGTGAGGCGTTGTTTGAGCTATGTTGAAACCGTAAAAGACCCTTTCATTCTCGGACTATCTAACTCATAAACGAACCGATAGTTACATCTAAGCGATCCTATCGTATTTGATTCCAAATGTTGAGATTTGTAAGGCTATGCGGACTAGCGCCAGCTTTGGAACTTGAGAATGGATATTACTTATTATTATTATTATTATTATTTATAAACAATTTGTGATAGTAAAGAAATATGTGAATGATAGCAAAATATAATTACTTATGGATGTAAAATATAAATTAATTTTGTTTCATTTTTTTAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>108</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="3429" PGL_stop="2288"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="2875" e_stop="2288"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="2875" e_stop="2288" e_length="588"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2875" stop="2667"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464451" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2731" stop="2310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735126" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2715" stop="2325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229933" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2710" stop="2325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230155" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2606" stop="2289"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235124" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2582" stop="2288"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308814" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2582" stop="2344"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309751" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2576" stop="2317"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302786" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2572" stop="2310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309715" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2571" stop="2317"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309278" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2566" stop="2344"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309380" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2557" stop="2297"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219481" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTGCTGGAGGTGGAGCACATGGTGGCGGTGCATATGCTGGAGGTTCAGGAGGAGGTACTGGTGGCGGCTATGGTGCTGGTGGAGCACCCGGGGGTGGATATGGTGGTGGAGGTGGACATGGAGGCGGTGGTGGTAGTGCGTATGCTGGAGGAGAAGGAGGAGCCTCAGGTGGTGGATATGGTAGTGGAGGAGGAGCTGGTGGTGGTGCAGGAGGAGCACATGGAGGAGCATATGGTGGAGGCGGTGGTAGTGGTGCCGGTGGTGGTGGAGCCTATGCCGGTGGAGAGCATGCTGGTGGTTACGGAGGAGGTGCTGGAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGATATGATTGCTTGCATTTTACATATTGAAATGGTTGGCAAATATTCTCAATCTATAAG</gDNA_template>
            <first_frame> V  A  G  G  G  A  H  G  G  G  A  Y  A  G  G  S  G  G  G  T  G  G  G  Y  G  A  G  G  A  P  G  G  G  Y  G  G  G  G  G  H  G  G  G  G  G  S  A  Y  A  G  G  E  G  G  A  S  G  G  G  Y  G  S  G  G  G  A  G  G  G  A  G  G  A  H  G  G  A  Y  G  G  G  G  G  S  G  A  G  G  G  G  A  Y  A  G  G  E  H  A  G  G  Y  G  G  G  A  G  G  G  E  G  G  G  H  G  G  G  Y  A  P  *  A  V  I  L  I  *  K  Y  P  S  S  Y  L  H  Y  *  K  N  N  V  L  R  L  W  *  E  D  V  I  Y  I  L  E  E  K  E  L  *  L  S  P  A  I  F  L  S  V  M  W  F  P  L  K  A  T  L  R  Y  D  C  L  H  F  T  Y  *  N  G  W  Q  I  F  S  I  Y  K </first_frame>
            <second_frame>  L  L  E  V  E  H  M  V  A  V  H  M  L  E  V  Q  E  E  V  L  V  A  A  M  V  L  V  E  H  P  G  V  D  M  V  V  E  V  D  M  E  A  V  V  V  V  R  M  L  E  E  K  E  E  P  Q  V  V  D  M  V  V  E  E  E  L  V  V  V  Q  E  E  H  M  E  E  H  M  V  E  A  V  V  V  V  P  V  V  V  E  P  M  P  V  E  S  M  L  V  V  T  E  E  V  L  E  V  V  K  V  V  D  T  V  V  A  T  L  L  K  R  S  F  *  S  K  S  I  H  L  L  T  Y  T  I  K  K  I  M  Y  *  D  C  G  R  K  M  L  Y  I  Y  W  K  K  K  N  C  S  *  V  L  Q  S  F  *  V  *  C  G  F  L  *  K  Q  H  *  D  M  I  A  C  I  L  H  I  E  M  V  G  K  Y  S  Q  S  I   </second_frame>
            <third_frame>   C  W  R  W  S  T  W  W  R  C  I  C  W  R  F  R  R  R  Y  W  W  R  L  W  C  W  W  S  T  R  G  W  I  W  W  W  R  W  T  W  R  R  W  W  *  C  V  C  W  R  R  R  R  S  L  R  W  W  I  W  *  W  R  R  S  W  W  W  C  R  R  S  T  W  R  S  I  W  W  R  R  W  *  W  C  R  W  W  W  S  L  C  R  W  R  A  C  W  W  L  R  R  R  C  W  R  W  *  R  W  W  T  R  W  W  L  R  S  L  S  G  H  S  N  L  K  V  S  I  F  L  P  T  L  L  K  K  *  C  T  E  I  V  V  G  R  C  Y  I  Y  I  G  R  K  R  I  V  V  K  S  C  N  L  F  K  C  N  V  V  S  F  K  S  N  I  K  I  *  L  L  A  F  Y  I  L  K  W  L  A  N  I  L  N  L  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2874" stop="2503"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>369</number_coding_nucleotides>
                  <number_encoded_amino_acids>123</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLEVEHMVAVHMLEVQEEVLVAAMVLVEHPGVDMVVEVDMEAVVVVRMLEEKEEPQVVDMVVEEELVVVQEEHMEEHMVEAVVVVPVVVEPMPVESMLVVTEEVLEVVKVVDTVVATLLKRSF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2875" stop="2516"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>357</number_coding_nucleotides>
                  <number_encoded_amino_acids>119</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VAGGGAHGGGAYAGGSGGGTGGGYGAGGAPGGGYGGGGGHGGGGGSAYAGGEGGASGGGYGSGGGAGGGAGGAHGGAYGGGGGSGAGGGGAYAGGEHAGGYGGGAGGGEGGGHGGGYAP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="3429" e_stop="3259"/>
            <exon e_start="2721" e_stop="2288"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.976"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.976">
            <gDNA_exon_boundary e_start="3429" e_stop="3259" e_length="171"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="3258" i_stop="2722" i_length="537"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="2721" e_stop="2288" e_length="434"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3429" stop="3318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E537380" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3424" stop="3259"/>
              <exon start="2721" stop="2317"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735202" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2715" stop="2325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229933" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2710" stop="2325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230155" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2606" stop="2289"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235124" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2582" stop="2288"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308814" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2582" stop="2344"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309751" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2576" stop="2317"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302786" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2572" stop="2310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309715" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2571" stop="2317"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309278" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2566" stop="2344"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309380" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2557" stop="2297"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219481" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCATGGCGAAGCTTAAAATTGTTAACATTGTTTTCTTTGTGTTATTAGGTATTGGAATATGTTCAGCCGCTCGAACGCTCCTCACTTACGATCATGTTGGTGTTGGGGGTGAAGTAGGCGCTTATGCTGGTGGTGGTGGAGGAGGTTCCGGCGGAGGTGGTGCCTATGCAG : AAGGAGGAGCCTCAGGTGGTGGATATGGTAGTGGAGGAGGAGCTGGTGGTGGTGCAGGAGGAGCACATGGAGGAGCATATGGTGGAGGCGGTGGTAGTGGTGCCGGTGGTGGTGGAGCCTATGCCGGTGGAGAGCATGCTGGTGGTTACGGAGGAGGTGCTGGAGGTGGTGAAGGTGGTGGACACGGTGGTGGCTACGCTCCTTAAGCGGTCATTCTAATCTAAAAGTATCCATCTTCTTACCTACACTATTAAAAAAATAATGTACTGAGATTGTGGTAGGAAGATGTTATATATATATTGGAAGAAAAAGAATTGTAGTTAAGTCCTGCAATCTTTTTAAGTGTAATGTGGTTTCCTTTAAAAGCAACATTAAGATATGATTGCTTGCATTTTACATATTGAAATGGTTGGCAAATATTCTCAATCTATAAG</gDNA_template>
            <first_frame> P  W  R  S  L  K  L  L  T  L  F  S  L  C  Y  *  V  L  E  Y  V  Q  P  L  E  R  S  S  L  T  I  M  L  V  L  G  V  K  *  A  L  M  L  V  V  V  E  E  V  P  A  E  V  V  P  M  Q  :  K  E  E  P  Q  V  V  D  M  V  V  E  E  E  L  V  V  V  Q  E  E  H  M  E  E  H  M  V  E  A  V  V  V  V  P  V  V  V  E  P  M  P  V  E  S  M  L  V  V  T  E  E  V  L  E  V  V  K  V  V  D  T  V  V  A  T  L  L  K  R  S  F  *  S  K  S  I  H  L  L  T  Y  T  I  K  K  I  M  Y  *  D  C  G  R  K  M  L  Y  I  Y  W  K  K  K  N  C  S  *  V  L  Q  S  F  *  V  *  C  G  F  L  *  K  Q  H  *  D  M  I  A  C  I  L  H  I  E  M  V  G  K  Y  S  Q  S  I   </first_frame>
            <second_frame>  H  G  E  A  *  N  C  *  H  C  F  L  C  V  I  R  Y  W  N  M  F  S  R  S  N  A  P  H  L  R  S  C  W  C  W  G  *  S  R  R  L  C  W  W  W  W  R  R  F  R  R  R  W  C  L  C  R :   R  R  S  L  R  W  W  I  W  *  W  R  R  S  W  W  W  C  R  R  S  T  W  R  S  I  W  W  R  R  W  *  W  C  R  W  W  W  S  L  C  R  W  R  A  C  W  W  L  R  R  R  C  W  R  W  *  R  W  W  T  R  W  W  L  R  S  L  S  G  H  S  N  L  K  V  S  I  F  L  P  T  L  L  K  K  *  C  T  E  I  V  V  G  R  C  Y  I  Y  I  G  R  K  R  I  V  V  K  S  C  N  L  F  K  C  N  V  V  S  F  K  S  N  I  K  I  *  L  L  A  F  Y  I  L  K  W  L  A  N  I  L  N  L  *  </second_frame>
            <third_frame>   M  A  K  L  K  I  V  N  I  V  F  F  V  L  L  G  I  G  I  C  S  A  A  R  T  L  L  T  Y  D  H  V  G  V  G  G  E  V  G  A  Y  A  G  G  G  G  G  G  S  G  G  G  G  A  Y  A   : E  G  G  A  S  G  G  G  Y  G  S  G  G  G  A  G  G  G  A  G  G  A  H  G  G  A  Y  G  G  G  G  G  S  G  A  G  G  G  G  A  Y  A  G  G  E  H  A  G  G  Y  G  G  G  A  G  G  G  E  G  G  G  H  G  G  G  Y  A  P  *  A  V  I  L  I  *  K  Y  P  S  S  Y  L  H  Y  *  K  N  N  V  L  R  L  W  *  E  D  V  I  Y  I  L  E  E  K  E  L  *  L  S  P  A  I  F  L  S  V  M  W  F  P  L  K  A  T  L  R  Y  D  C  L  H  F  T  Y  *  N  G  W  Q  I  F  S  I  Y  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3427" stop="3259"/>
                    <exon start="2721" stop="2516"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>372</number_coding_nucleotides>
                  <number_encoded_amino_acids>124</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MAKLKIVNIVFFVLLGIGICSAARTLLTYDHVGVGGEVGAYAGGGGGGSGGGGAYAEGGASGGGYGSGGGAGGGAGGAHGGAYGGGGGSGAGGGGAYAGGEHAGGYGGGAGGGEGGGHGGGYAP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="2453" PGL_stop="3037"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="2453" e_stop="2838"/>
            <exon e_start="3013" e_stop="3037"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.982"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="2453" e_stop="2838" e_length="386"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="2839" i_stop="3012" i_length="174"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="3013" e_stop="3037" e_length="25"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2453" stop="2838"/>
              <exon start="3013" stop="3037"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308113" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAGTACATTATTTTTTTAATAGTGTAGGTAAGAAGATGGATACTTTTAGATTAGAATGACCGCTTAAGGAGCGTAGCCACCACCGTGTCCACCACCTTCACCACCTCCAGCACCTCCTCCGTAACCACCAGCATGCTCTCCACCGGCATAGGCTCCACCACCACCGGCACCACTACCACCGCCTCCACCATATGCTCCTCCATGTGCTCCTCCTGCACCACCACCAGCTCCTCCTCCACTACCATATCCACCACCTGAGGCTCCTCCTTCTCCTCCAGCATACGCACTACCACCACCGCCTCCATGTCCACCTCCACCACCATATCCACCCCCGGGTGCTCCACCAGCACCATAGCCGCCACCAGTACCTCCTCCTGAACCTCCAG : CATGAGCACCTCCAGCTCCACTTCC</gDNA_template>
            <first_frame> Q  Y  I  I  F  L  I  V  *  V  R  R  W  I  L  L  D  *  N  D  R  L  R  S  V  A  T  T  V  S  T  T  F  T  T  S  S  T  S  S  V  T  T  S  M  L  S  T  G  I  G  S  T  T  T  G  T  T  T  T  A  S  T  I  C  S  S  M  C  S  S  C  T  T  T  S  S  S  S  T  T  I  S  T  T  *  G  S  S  F  S  S  S  I  R  T  T  T  T  A  S  M  S  T  S  T  T  I  S  T  P  G  C  S  T  S  T  I  A  A  T  S  T  S  S  *  T  S  S :   M  S  T  S  S  S  T  S </first_frame>
            <second_frame>  S  T  L  F  F  *  *  C  R  *  E  D  G  Y  F  *  I  R  M  T  A  *  G  A  *  P  P  P  C  P  P  P  S  P  P  P  A  P  P  P  *  P  P  A  C  S  P  P  A  *  A  P  P  P  P  A  P  L  P  P  P  P  P  Y  A  P  P  C  A  P  P  A  P  P  P  A  P  P  P  L  P  Y  P  P  P  E  A  P  P  S  P  P  A  Y  A  L  P  P  P  P  P  C  P  P  P  P  P  Y  P  P  P  G  A  P  P  A  P  *  P  P  P  V  P  P  P  E  P  P   : A  *  A  P  P  A  P  L   </second_frame>
            <third_frame>   V  H  Y  F  F  N  S  V  G  K  K  M  D  T  F  R  L  E  *  P  L  K  E  R  S  H  H  R  V  H  H  L  H  H  L  Q  H  L  L  R  N  H  Q  H  A  L  H  R  H  R  L  H  H  H  R  H  H  Y  H  R  L  H  H  M  L  L  H  V  L  L  L  H  H  H  Q  L  L  L  H  Y  H  I  H  H  L  R  L  L  L  L  L  Q  H  T  H  Y  H  H  R  L  H  V  H  L  H  H  H  I  H  P  R  V  L  H  Q  H  H  S  R  H  Q  Y  L  L  L  N  L  Q  :  H  E  H  L  Q  L  H  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2512" stop="2838"/>
                    <exon start="3013" stop="3036"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>351</number_coding_nucleotides>
                  <number_encoded_amino_acids>117</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PLKERSHHRVHHLHHLQHLLRNHQHALHRHRLHHHRHHYHRLHHMLLHVLLLHHHQLLLHYHIHHLRLLLLLQHTHYHHRLHVHLHHHIHPRVLHQHHSRHQYLLLNLQHEHLQLHF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="9988" PGL_stop="11244"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9988" e_stop="10512"/>
            <exon e_start="11009" e_stop="11244"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.975"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="9988" e_stop="10512" e_length="525"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.000">
            <gDNA_intron_boundary i_start="10513" i_stop="11008" i_length="496"/>
          </intron>
          <exon e_serial="2" e_score="0.975">
            <gDNA_exon_boundary e_start="11009" e_stop="11244" e_length="236"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9988" stop="10512"/>
              <exon start="11009" stop="11117"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305101" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10314" stop="10512"/>
              <exon start="11009" stop="11124"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273581" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10374" stop="10512"/>
              <exon start="11009" stop="11244"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211088" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCGTATGGACTCTTTAGCTGGCCTCTATTTTTAGACTCTGATCACTCAAATTTAGCAACTTCTCAACTATTTAGAATTGATAGTACTAGAAAAAAAAAACAACCTTTTTTTCATGTTTTGACAAACCATATAGTGACATTTTGTGCCTTGTGGGATAAGGCAGTTTTGAACCTTTATTTTTTTTCCTGGAAGATGATTGAATTGTTCCAGGGATATTGCATCTTATGTGAACTTACAAAATTCAGTGTAGCTAAAAGTTTTTATTTTTGGATATTTCAAATTTTCAATAGGTACAGTTTGAACATTTAGCTAAATTTCATATTGTAATTTGTGTGTAGTTATAGCAGTTGGAAAAATATTTACTTATATGGCAGGAATATCGTTACCTCCCGGATTTCGTTTCCATCCAACTGATCAGGAATTGGTTGGATATTACCTGAAAAGAAAAACTGATGAACTTGAAATTGAGTTGGAAGTTATTCCAGTAATAGATCTGTACAAATTTGACCCATGGGACCTTCCAG : AGAAATCTTTCTTGCCAAAACGTGATATGGAATGGTACTTCTTCTGCTCTCGGGACAAGAAGTACCCGAATGGCTCGCGAACAAATCGAGCCACTAATTCTGGATACTGGAAAGCCACAGGGAAAGACAAGAAAGTTGTATGTAAGTCTGCAGTTGTAGGATACAGGAAGACACTAGTTTTTTACCGCGGAAGAGCTCCTCTAGGGGATAGAACTGATTGGGTAATGCATGAATAT</gDNA_template>
            <first_frame> F  V  W  T  L  *  L  A  S  I  F  R  L  *  S  L  K  F  S  N  F  S  T  I  *  N  *  *  Y  *  K  K  K  T  T  F  F  S  C  F  D  K  P  Y  S  D  I  L  C  L  V  G  *  G  S  F  E  P  L  F  F  F  L  E  D  D  *  I  V  P  G  I  L  H  L  M  *  T  Y  K  I  Q  C  S  *  K  F  L  F  L  D  I  S  N  F  Q  *  V  Q  F  E  H  L  A  K  F  H  I  V  I  C  V  *  L  *  Q  L  E  K  Y  L  L  I  W  Q  E  Y  R  Y  L  P  D  F  V  S  I  Q  L  I  R  N  W  L  D  I  T  *  K  E  K  L  M  N  L  K  L  S  W  K  L  F  Q  *  *  I  C  T  N  L  T  H  G  T  F  Q  :  R  N  L  S  C  Q  N  V  I  W  N  G  T  S  S  A  L  G  T  R  S  T  R  M  A  R  E  Q  I  E  P  L  I  L  D  T  G  K  P  Q  G  K  T  R  K  L  Y  V  S  L  Q  L  *  D  T  G  R  H  *  F  F  T  A  E  E  L  L  *  G  I  E  L  I  G  *  C  M  N   </first_frame>
            <second_frame>  S  Y  G  L  F  S  W  P  L  F  L  D  S  D  H  S  N  L  A  T  S  Q  L  F  R  I  D  S  T  R  K  K  K  Q  P  F  F  H  V  L  T  N  H  I  V  T  F  C  A  L  W  D  K  A  V  L  N  L  Y  F  F  S  W  K  M  I  E  L  F  Q  G  Y  C  I  L  C  E  L  T  K  F  S  V  A  K  S  F  Y  F  W  I  F  Q  I  F  N  R  Y  S  L  N  I  *  L  N  F  I  L  *  F  V  C  S  Y  S  S  W  K  N  I  Y  L  Y  G  R  N  I  V  T  S  R  I  S  F  P  S  N  *  S  G  I  G  W  I  L  P  E  K  K  N  *  *  T  *  N  *  V  G  S  Y  S  S  N  R  S  V  Q  I  *  P  M  G  P  S  R :   E  I  F  L  A  K  T  *  Y  G  M  V  L  L  L  L  S  G  Q  E  V  P  E  W  L  A  N  K  S  S  H  *  F  W  I  L  E  S  H  R  E  R  Q  E  S  C  M  *  V  C  S  C  R  I  Q  E  D  T  S  F  L  P  R  K  S  S  S  R  G  *  N  *  L  G  N  A  *  I  </second_frame>
            <third_frame>   R  M  D  S  L  A  G  L  Y  F  *  T  L  I  T  Q  I  *  Q  L  L  N  Y  L  E  L  I  V  L  E  K  K  N  N  L  F  F  M  F  *  Q  T  I  *  *  H  F  V  P  C  G  I  R  Q  F  *  T  F  I  F  F  P  G  R  *  L  N  C  S  R  D  I  A  S  Y  V  N  L  Q  N  S  V  *  L  K  V  F  I  F  G  Y  F  K  F  S  I  G  T  V  *  T  F  S  *  I  S  Y  C  N  L  C  V  V  I  A  V  G  K  I  F  T  Y  M  A  G  I  S  L  P  P  G  F  R  F  H  P  T  D  Q  E  L  V  G  Y  Y  L  K  R  K  T  D  E  L  E  I  E  L  E  V  I  P  V  I  D  L  Y  K  F  D  P  W  D  L  P   : E  K  S  F  L  P  K  R  D  M  E  W  Y  F  F  C  S  R  D  K  K  Y  P  N  G  S  R  T  N  R  A  T  N  S  G  Y  W  K  A  T  G  K  D  K  K  V  V  C  K  S  A  V  V  G  Y  R  K  T  L  V  F  Y  R  G  R  A  P  L  G  D  R  T  D  W  V  M  H  E  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10302" stop="10512"/>
                    <exon start="11009" stop="11244"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>447</number_coding_nucleotides>
                  <number_encoded_amino_acids>149</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISYCNLCVVIAVGKIFTYMAGISLPPGFRFHPTDQELVGYYLKRKTDELEIELEVIPVIDLYKFDPWDLPEKSFLPKRDMEWYFFCSRDKKYPNGSRTNRATNSGYWKATGKDKKVVCKSAVVGYRKTLVFYRGRAPLGDRTDWVMHEY</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9989" stop="10297"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>306</number_coding_nucleotides>
                  <number_encoded_amino_acids>102</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SYGLFSWPLFLDSDHSNLATSQLFRIDSTRKKKQPFFHVLTNHIVTFCALWDKAVLNLYFFSWKMIELFQGYCILCELTKFSVAKSFYFWIFQIFNRYSLNI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="11380" PGL_stop="11970"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="11380" e_stop="11970"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.939"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.939">
            <gDNA_exon_boundary e_start="11380" e_stop="11970" e_length="591"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11380" stop="11970"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E486512" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11380" stop="11952"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E427345" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCTCTTTGTCGTGTCATCAAGAGAAAGGACAACATTCCATCGAAGACAAGTGATGTTCATGGAGGTACAGTTTTCAAACAAGTTGAATGCAGTTCAAGCATAGAAGGTTTTACCTCAACGGTAGCCTTAAATGAACCCCTTCTACTTTCTAATGACATGCCAACTCCATCTACATACATGTCCGGTAACAGCAACTATTCAACTCCTACTAATTCTCCTTATAAGATAACACAAATAGAGGACTATGACTCTGCAAACCTCTGGATGCCTCAGAATAAGGTTCTTGATCCTTCAAAGGTATTGATGTTGTTCCTTTTTCTATGCATTTCTTCATGTTTTTTCTATGAACTTCATACTAATATCTTGGTGGCTGTATATAGGAATGTCCTCAAGGAAGAAGTATATCTGGAAACTATCCCCATATGTTCTCAAACTCAACTTCATGGCAGCCAAGTGATCAGTATGACTTCACATCAAGTTCATCTTTCCCGAATTTTAGAGGGGAAGTTGAACTTTCTGGTGATCTCAGTGGCTATGGCAATGTATCTCCCTTCTCAGTCGACGGAAGCTGCATGGAGTTCTATGGAAGTG</gDNA_template>
            <first_frame> A  L  C  R  V  I  K  R  K  D  N  I  P  S  K  T  S  D  V  H  G  G  T  V  F  K  Q  V  E  C  S  S  S  I  E  G  F  T  S  T  V  A  L  N  E  P  L  L  L  S  N  D  M  P  T  P  S  T  Y  M  S  G  N  S  N  Y  S  T  P  T  N  S  P  Y  K  I  T  Q  I  E  D  Y  D  S  A  N  L  W  M  P  Q  N  K  V  L  D  P  S  K  V  L  M  L  F  L  F  L  C  I  S  S  C  F  F  Y  E  L  H  T  N  I  L  V  A  V  Y  R  N  V  L  K  E  E  V  Y  L  E  T  I  P  I  C  S  Q  T  Q  L  H  G  S  Q  V  I  S  M  T  S  H  Q  V  H  L  S  R  I  L  E  G  K  L  N  F  L  V  I  S  V  A  M  A  M  Y  L  P  S  Q  S  T  E  A  A  W  S  S  M  E  V </first_frame>
            <second_frame>  L  F  V  V  S  S  R  E  R  T  T  F  H  R  R  Q  V  M  F  M  E  V  Q  F  S  N  K  L  N  A  V  Q  A  *  K  V  L  P  Q  R  *  P  *  M  N  P  F  Y  F  L  M  T  C  Q  L  H  L  H  T  C  P  V  T  A  T  I  Q  L  L  L  I  L  L  I  R  *  H  K  *  R  T  M  T  L  Q  T  S  G  C  L  R  I  R  F  L  I  L  Q  R  Y  *  C  C  S  F  F  Y  A  F  L  H  V  F  S  M  N  F  I  L  I  S  W  W  L  Y  I  G  M  S  S  R  K  K  Y  I  W  K  L  S  P  Y  V  L  K  L  N  F  M  A  A  K  *  S  V  *  L  H  I  K  F  I  F  P  E  F  *  R  G  S  *  T  F  W  *  S  Q  W  L  W  Q  C  I  S  L  L  S  R  R  K  L  H  G  V  L  W  K   </second_frame>
            <third_frame>   S  L  S  C  H  Q  E  K  G  Q  H  S  I  E  D  K  *  C  S  W  R  Y  S  F  Q  T  S  *  M  Q  F  K  H  R  R  F  Y  L  N  G  S  L  K  *  T  P  S  T  F  *  *  H  A  N  S  I  Y  I  H  V  R  *  Q  Q  L  F  N  S  Y  *  F  S  L  *  D  N  T  N  R  G  L  *  L  C  K  P  L  D  A  S  E  *  G  S  *  S  F  K  G  I  D  V  V  P  F  S  M  H  F  F  M  F  F  L  *  T  S  Y  *  Y  L  G  G  C  I  *  E  C  P  Q  G  R  S  I  S  G  N  Y  P  H  M  F  S  N  S  T  S  W  Q  P  S  D  Q  Y  D  F  T  S  S  S  S  F  P  N  F  R  G  E  V  E  L  S  G  D  L  S  G  Y  G  N  V  S  P  F  S  V  D  G  S  C  M  E  F  Y  G  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11380" stop="11970"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>591</number_coding_nucleotides>
                  <number_encoded_amino_acids>197</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ALCRVIKRKDNIPSKTSDVHGGTVFKQVECSSSIEGFTSTVALNEPLLLSNDMPTPSTYMSGNSNYSTPTNSPYKITQIEDYDSANLWMPQNKVLDPSKVLMLFLFLCISSCFFYELHTNILVAVYRNVLKEEVYLETIPICSQTQLHGSQVISMTSHQVHLSRILEGKLNFLVISVAMAMYLPSQSTEAAWSSMEV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="12368" PGL_stop="12087"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="12368" e_stop="12087"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.915"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.915">
            <gDNA_exon_boundary e_start="12368" e_stop="12087" e_length="282"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12368" stop="12087"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E427346" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTTAATTCTATCCAAGAGATTCAGCTACTAACTTTACCATTTTTCTGTGAGATCATTAAAAAACGATCATCACTTGGTATCTCATACTTCAATGACAAAACATCAGCTAGATTTGAACTTAGGAAACTAAACTCGAAGGTGATGTAATAAGATCAAATGACTCTTTAAGACAGACATTAAAAAGCTGTAGTCTCAGAGAACAACTTCAGATTATTTCAGTAGCATATTTAGTTGCATTTACCTATTCTTAGTAGATTCTTACATCAACTACTTACATTATC</gDNA_template>
            <first_frame> A  *  F  Y  P  R  D  S  A  T  N  F  T  I  F  L  *  D  H  *  K  T  I  I  T  W  Y  L  I  L  Q  *  Q  N  I  S  *  I  *  T  *  E  T  K  L  E  G  D  V  I  R  S  N  D  S  L  R  Q  T  L  K  S  C  S  L  R  E  Q  L  Q  I  I  S  V  A  Y  L  V  A  F  T  Y  S  *  *  I  L  T  S  T  T  Y  I  I </first_frame>
            <second_frame>  L  N  S  I  Q  E  I  Q  L  L  T  L  P  F  F  C  E  I  I  K  K  R  S  S  L  G  I  S  Y  F  N  D  K  T  S  A  R  F  E  L  R  K  L  N  S  K  V  M  *  *  D  Q  M  T  L  *  D  R  H  *  K  A  V  V  S  E  N  N  F  R  L  F  Q  *  H  I  *  L  H  L  P  I  L  S  R  F  L  H  Q  L  L  T  L   </second_frame>
            <third_frame>   L  I  L  S  K  R  F  S  Y  *  L  Y  H  F  S  V  R  S  L  K  N  D  H  H  L  V  S  H  T  S  M  T  K  H  Q  L  D  L  N  L  G  N  *  T  R  R  *  C  N  K  I  K  *  L  F  K  T  D  I  K  K  L  *  S  Q  R  T  T  S  D  Y  F  S  S  I  F  S  C  I  Y  L  F  L  V  D  S  Y  I  N  Y  L  H  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0024F02.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="15755" PGL_stop="14146"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15755" e_stop="15525"/>
            <exon e_start="14979" e_stop="14146"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.986" e_score="1.000"/>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="15755" e_stop="15525" e_length="231"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.986">
            <gDNA_intron_boundary i_start="15524" i_stop="14980" i_length="545"/>
          </intron>
          <exon e_serial="2" e_score="0.977">
            <gDNA_exon_boundary e_start="14979" e_stop="14146" e_length="834"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15755" stop="15525"/>
              <exon start="14979" stop="14404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E687623" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15752" stop="15525"/>
              <exon start="14979" stop="14626"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322664" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15752" stop="15525"/>
              <exon start="14979" stop="14761"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290161" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15609" stop="15525"/>
              <exon start="14979" stop="14529"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295575" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14516" stop="14146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220747" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGAGAAATAAAGGTAAAGGAAGGAGAGTGGTCACTCTGCTTCAGCCATGAGTTGCTCCATAGCAATACTAAATTCTATATCCACTCCTTATTTTAATAAATATTGTACAAGAAGCTTATTTAAATGGAATTTTGGGAAAAATAACAAGATTGATGATAAGCCACAATTTACATATCATGATCTTGATCTCCCTTTTCCTCCTTCCCTCCTCACCAAAACATTCTTGAAAG : GAAGGGAACTGAAATGCTGCTATAAGGCCTCAGTGGATGGATTTAGTGCGACTGAATTCCATAACAGATCTGATTTCAAAGGACCATGTGTGATCATTGGCTACACAACAGAGGCCTTTAAGTTTGGAGCGTTTAATCCAGAAGGCTACAGAAGCACAGATGATTATTACGACACTTTTGATGCATTTCTGTTTTATTGGGATGAAGATGTTGAAAAACCAATAATGTTGCCTAAAGTAGGGGGAAGTGGTGCTGCTCTATTTGATTATGCTAGAGGAGGTCCACAGTTTGGTGCTGATGGATTGCTCATTGGTCCTCCATTGGCTCCTGTCATGGGTGGATTTGCTGGACCTGATACGAATTCTGGAGTGGGTGATTTAAGGCAAGCTAAATCAAGATTGGGACTTTCCTATGCTAAAAGGCCTGATGGTAAAGAATCATTGTTTGGAGATGAGTCTAAGGCTGTTGTTGATGAAGTTCTTGTATTTTGTAGTCCACAAATTGCTAGCTTATATTGATTCTTCATGTTTTCCATGAAGTTTTTGGTCTTTTTGGCGAATATGGATGTCAAAACTAATTACAAGTCTTAGTGATGGAAGTGACTAGAAAAATGTGAATTAATATGCTAGGTCATAAAATGAAGAGAATCCTTAGCAATGATAAAGTTGTCCTTCTATAGGTCACAGATTCGAGTGATGGATCAGCCACTGACCCTTTGAGTATAGCCCTTCCCTGATCGATCCCTGCATGAACACGGGTGCACCGTGCTACCTTTATATACCAGGTCATAAGATGTAGCACTGTAAATTTCAATTTTTTTGTACAGAGATGGAT</gDNA_template>
            <first_frame> K  R  N  K  G  K  G  R  R  V  V  T  L  L  Q  P  *  V  A  P  *  Q  Y  *  I  L  Y  P  L  L  I  L  I  N  I  V  Q  E  A  Y  L  N  G  I  L  G  K  I  T  R  L  M  I  S  H  N  L  H  I  M  I  L  I  S  L  F  L  L  P  S  S  P  K  H  S  *  K  :  E  G  N  *  N  A  A  I  R  P  Q  W  M  D  L  V  R  L  N  S  I  T  D  L  I  S  K  D  H  V  *  S  L  A  T  Q  Q  R  P  L  S  L  E  R  L  I  Q  K  A  T  E  A  Q  M  I  I  T  T  L  L  M  H  F  C  F  I  G  M  K  M  L  K  N  Q  *  C  C  L  K  *  G  E  V  V  L  L  Y  L  I  M  L  E  E  V  H  S  L  V  L  M  D  C  S  L  V  L  H  W  L  L  S  W  V  D  L  L  D  L  I  R  I  L  E  W  V  I  *  G  K  L  N  Q  D  W  D  F  P  M  L  K  G  L  M  V  K  N  H  C  L  E  M  S  L  R  L  L  L  M  K  F  L  Y  F  V  V  H  K  L  L  A  Y  I  D  S  S  C  F  P  *  S  F  W  S  F  W  R  I  W  M  S  K  L  I  T  S  L  S  D  G  S  D  *  K  N  V  N  *  Y  A  R  S  *  N  E  E  N  P  *  Q  *  *  S  C  P  S  I  G  H  R  F  E  *  W  I  S  H  *  P  F  E  Y  S  P  S  L  I  D  P  C  M  N  T  G  A  P  C  Y  L  Y  I  P  G  H  K  M  *  H  C  K  F  Q  F  F  C  T  E  M  D </first_frame>
            <second_frame>  R  E  I  K  V  K  E  G  E  W  S  L  C  F  S  H  E  L  L  H  S  N  T  K  F  Y  I  H  S  L  F  *  *  I  L  Y  K  K  L  I  *  M  E  F  W  E  K  *  Q  D  *  *  *  A  T  I  Y  I  S  *  S  *  S  P  F  S  S  F  P  P  H  Q  N  I  L  E  R :   K  G  T  E  M  L  L  *  G  L  S  G  W  I  *  C  D  *  I  P  *  Q  I  *  F  Q  R  T  M  C  D  H  W  L  H  N  R  G  L  *  V  W  S  V  *  S  R  R  L  Q  K  H  R  *  L  L  R  H  F  *  C  I  S  V  L  L  G  *  R  C  *  K  T  N  N  V  A  *  S  R  G  K  W  C  C  S  I  *  L  C  *  R  R  S  T  V  W  C  *  W  I  A  H  W  S  S  I  G  S  C  H  G  W  I  C  W  T  *  Y  E  F  W  S  G  *  F  K  A  S  *  I  K  I  G  T  F  L  C  *  K  A  *  W  *  R  I  I  V  W  R  *  V  *  G  C  C  *  *  S  S  C  I  L  *  S  T  N  C  *  L  I  L  I  L  H  V  F  H  E  V  F  G  L  F  G  E  Y  G  C  Q  N  *  L  Q  V  L  V  M  E  V  T  R  K  M  *  I  N  M  L  G  H  K  M  K  R  I  L  S  N  D  K  V  V  L  L  *  V  T  D  S  S  D  G  S  A  T  D  P  L  S  I  A  L  P  *  S  I  P  A  *  T  R  V  H  R  A  T  F  I  Y  Q  V  I  R  C  S  T  V  N  F  N  F  F  V  Q  R  W   </second_frame>
            <third_frame>   E  K  *  R  *  R  K  E  S  G  H  S  A  S  A  M  S  C  S  I  A  I  L  N  S  I  S  T  P  Y  F  N  K  Y  C  T  R  S  L  F  K  W  N  F  G  K  N  N  K  I  D  D  K  P  Q  F  T  Y  H  D  L  D  L  P  F  P  P  S  L  L  T  K  T  F  L  K   : G  R  E  L  K  C  C  Y  K  A  S  V  D  G  F  S  A  T  E  F  H  N  R  S  D  F  K  G  P  C  V  I  I  G  Y  T  T  E  A  F  K  F  G  A  F  N  P  E  G  Y  R  S  T  D  D  Y  Y  D  T  F  D  A  F  L  F  Y  W  D  E  D  V  E  K  P  I  M  L  P  K  V  G  G  S  G  A  A  L  F  D  Y  A  R  G  G  P  Q  F  G  A  D  G  L  L  I  G  P  P  L  A  P  V  M  G  G  F  A  G  P  D  T  N  S  G  V  G  D  L  R  Q  A  K  S  R  L  G  L  S  Y  A  K  R  P  D  G  K  E  S  L  F  G  D  E  S  K  A  V  V  D  E  V  L  V  F  C  S  P  Q  I  A  S  L  Y  *  F  F  M  F  S  M  K  F  L  V  F  L  A  N  M  D  V  K  T  N  Y  K  S  *  *  W  K  *  L  E  K  C  E  L  I  C  *  V  I  K  *  R  E  S  L  A  M  I  K  L  S  F  Y  R  S  Q  I  R  V  M  D  Q  P  L  T  L  *  V  *  P  F  P  D  R  S  L  H  E  H  G  C  T  V  L  P  L  Y  T  R  S  *  D  V  A  L  *  I  S  I  F  L  Y  R  D  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15738" stop="15525"/>
                    <exon start="14979" stop="14462"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>729</number_coding_nucleotides>
                  <number_encoded_amino_acids>243</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKESGHSASAMSCSIAILNSISTPYFNKYCTRSLFKWNFGKNNKIDDKPQFTYHDLDLPFPPSLLTKTFLKGRELKCCYKASVDGFSATEFHNRSDFKGPCVIIGYTTEAFKFGAFNPEGYRSTDDYYDTFDAFLFYWDEDVEKPIMLPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTNSGVGDLRQAKSRLGLSYAKRPDGKESLFGDESKAVVDEVLVFCSPQIASLY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="17332" PGL_stop="16671"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17332" e_stop="16671"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="17332" e_stop="16671" e_length="662"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17332" stop="16671"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541570" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17332" stop="16690"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541567" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17331" stop="16686"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298409" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTCGAGTAGTATTCAAAGATCCATGCATTCGACTTGCCAGAGAAGTGACAACGACACTAAAGGAACTAGGCGATAGCATACGAAATCGTCGTAAATACTGCCCAGAAATCCCATCTAATCATGTCAATGAAGCCTTACAAGACCTCATCGACGCATTAAAATCCCAGCCAAGACTCTTTCTCGGCACAAATAGTAATACAAACATACTATTAGCCTTAGCCACATTGGCCACTAGGCAAAAATCAGGTAAAGATTTTGTAGCCTCTTTATCAAGTGTAAATAATGACGATCCTGCTCGTCTTGGACTTAGCCATGATAAAAAGAGTTTGAGGCCTACATTAAGCAAGATAGGCATGACTAGCTTGGAATTTTTGGAGGCCTTACCATTTGCAGCTTTTGCATCTTTGTTAGTTGAGATTGTTGCAAGACTTGATCTTGTTATTGAACAAGTAGTGGAATTGGGAAGAGTTGCGCAATTTAAGGAATATAGTCATGATGATGTGGTTATTAATGTAAGTTGTGATAATAATCCTAGAGTGGGAAATGAGTTCCCCTCCTCCCATACAGCAACAGATTGAGTACTCTAGACTTTAGTGGCTACATTTTTTCAGTAGTCAAATGATATATATGCATTATTTAGTGATGAGGGATACTGTATACG</gDNA_template>
            <first_frame> V  R  V  V  F  K  D  P  C  I  R  L  A  R  E  V  T  T  T  L  K  E  L  G  D  S  I  R  N  R  R  K  Y  C  P  E  I  P  S  N  H  V  N  E  A  L  Q  D  L  I  D  A  L  K  S  Q  P  R  L  F  L  G  T  N  S  N  T  N  I  L  L  A  L  A  T  L  A  T  R  Q  K  S  G  K  D  F  V  A  S  L  S  S  V  N  N  D  D  P  A  R  L  G  L  S  H  D  K  K  S  L  R  P  T  L  S  K  I  G  M  T  S  L  E  F  L  E  A  L  P  F  A  A  F  A  S  L  L  V  E  I  V  A  R  L  D  L  V  I  E  Q  V  V  E  L  G  R  V  A  Q  F  K  E  Y  S  H  D  D  V  V  I  N  V  S  C  D  N  N  P  R  V  G  N  E  F  P  S  S  H  T  A  T  D  *  V  L  *  T  L  V  A  T  F  F  Q  *  S  N  D  I  Y  A  L  F  S  D  E  G  Y  C  I   </first_frame>
            <second_frame>  F  E  *  Y  S  K  I  H  A  F  D  L  P  E  K  *  Q  R  H  *  R  N  *  A  I  A  Y  E  I  V  V  N  T  A  Q  K  S  H  L  I  M  S  M  K  P  Y  K  T  S  S  T  H  *  N  P  S  Q  D  S  F  S  A  Q  I  V  I  Q  T  Y  Y  *  P  *  P  H  W  P  L  G  K  N  Q  V  K  I  L  *  P  L  Y  Q  V  *  I  M  T  I  L  L  V  L  D  L  A  M  I  K  R  V  *  G  L  H  *  A  R  *  A  *  L  A  W  N  F  W  R  P  Y  H  L  Q  L  L  H  L  C  *  L  R  L  L  Q  D  L  I  L  L  L  N  K  *  W  N  W  E  E  L  R  N  L  R  N  I  V  M  M  M  W  L  L  M  *  V  V  I  I  I  L  E  W  E  M  S  S  P  P  P  I  Q  Q  Q  I  E  Y  S  R  L  *  W  L  H  F  F  S  S  Q  M  I  Y  M  H  Y  L  V  M  R  D  T  V  Y  </second_frame>
            <third_frame>   S  S  S  I  Q  R  S  M  H  S  T  C  Q  R  S  D  N  D  T  K  G  T  R  R  *  H  T  K  S  S  *  I  L  P  R  N  P  I  *  S  C  Q  *  S  L  T  R  P  H  R  R  I  K  I  P  A  K  T  L  S  R  H  K  *  *  Y  K  H  T  I  S  L  S  H  I  G  H  *  A  K  I  R  *  R  F  C  S  L  F  I  K  C  K  *  *  R  S  C  S  S  W  T  *  P  *  *  K  E  F  E  A  Y  I  K  Q  D  R  H  D  *  L  G  I  F  G  G  L  T  I  C  S  F  C  I  F  V  S  *  D  C  C  K  T  *  S  C  Y  *  T  S  S  G  I  G  K  S  C  A  I  *  G  I  *  S  *  *  C  G  Y  *  C  K  L  *  *  *  S  *  S  G  K  *  V  P  L  L  P  Y  S  N  R  L  S  T  L  D  F  S  G  Y  I  F  S  V  V  K  *  Y  I  C  I  I  *  *  *  G  I  L  Y  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17332" stop="16754"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>576</number_coding_nucleotides>
                  <number_encoded_amino_acids>192</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VRVVFKDPCIRLAREVTTTLKELGDSIRNRRKYCPEIPSNHVNEALQDLIDALKSQPRLFLGTNSNTNILLALATLATRQKSGKDFVASLSSVNNDDPARLGLSHDKKSLRPTLSKIGMTSLEFLEALPFAAFASLLVEIVARLDLVIEQVVELGRVAQFKEYSHDDVVINVSCDNNPRVGNEFPSSHTATD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="22006" PGL_stop="23060"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="22006" e_stop="22043"/>
            <exon e_start="22542" e_stop="23060"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.954"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="22006" e_stop="22043" e_length="38"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="22044" i_stop="22541" i_length="498"/>
          </intron>
          <exon e_serial="2" e_score="0.954">
            <gDNA_exon_boundary e_start="22542" e_stop="23060" e_length="519"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22006" stop="22043"/>
              <exon start="22542" stop="23060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712466" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGCACGTTGACATCCTCAAAGCCAAAGCCGAAGAAAAG : GCTGAGAAAGCAGTAGCAAGGACAAGGGAAGAGAAGAGGATAGCAGAAGAGGTGAGAAAAGCAAAAGAAGCGGAAGCGAAGATGGAGCTACATCAAGCGAAAGCACGTCATGCAGCGGAGACGCTGCAATCGAAGCAATCTCATCTAATAGGGCGCCACGGCCACGGCCACCACCATCATGCTGTCGGTGGCCAGCAAAATCCAGTGGTGGGTAGTACCGTTCCAACTACTGGGACCGTTGCTCCTACCTATCCTCTTGGAGGCTACCCTCCTACTTCTCATGGCCATATCTAATTTAGCAGCATCCTGTAGTAGTGTGTAGTTTCAGTTCCGTTCTCTGTAATGCCTTTGGAATAAATTGAGGAACGCCTTTGGTTTTTTTAGCTAGCTAGCTAGATCCATTGACAAGTATACATGTCATGACTAGTATCAAAACATTTCCCTTTGAAAGAATTATATTCTTTGTATTCCGCTTTCTGTCCAATATTCTGTACAACGCTCAATAAATAATAGAAAATT</gDNA_template>
            <first_frame> S  T  L  T  S  S  K  P  K  P  K  K  R :   L  R  K  Q  *  Q  G  Q  G  K  R  R  G  *  Q  K  R  *  E  K  Q  K  K  R  K  R  R  W  S  Y  I  K  R  K  H  V  M  Q  R  R  R  C  N  R  S  N  L  I  *  *  G  A  T  A  T  A  T  T  I  M  L  S  V  A  S  K  I  Q  W  W  V  V  P  F  Q  L  L  G  P  L  L  L  P  I  L  L  E  A  T  L  L  L  L  M  A  I  S  N  L  A  A  S  C  S  S  V  *  F  Q  F  R  S  L  *  C  L  W  N  K  L  R  N  A  F  G  F  F  S  *  L  A  R  S  I  D  K  Y  T  C  H  D  *  Y  Q  N  I  S  L  *  K  N  Y  I  L  C  I  P  L  S  V  Q  Y  S  V  Q  R  S  I  N  N  R  K   </first_frame>
            <second_frame>  A  R  *  H  P  Q  S  Q  S  R  R  K   : G  *  E  S  S  S  K  D  K  G  R  E  E  D  S  R  R  G  E  K  S  K  R  S  G  S  E  D  G  A  T  S  S  E  S  T  S  C  S  G  D  A  A  I  E  A  I  S  S  N  R  A  P  R  P  R  P  P  P  S  C  C  R  W  P  A  K  S  S  G  G  *  Y  R  S  N  Y  W  D  R  C  S  Y  L  S  S  W  R  L  P  S  Y  F  S  W  P  Y  L  I  *  Q  H  P  V  V  V  C  S  F  S  S  V  L  C  N  A  F  G  I  N  *  G  T  P  L  V  F  L  A  S  *  L  D  P  L  T  S  I  H  V  M  T  S  I  K  T  F  P  F  E  R  I  I  F  F  V  F  R  F  L  S  N  I  L  Y  N  A  Q  *  I  I  E  N  </second_frame>
            <third_frame>   H  V  D  I  L  K  A  K  A  E  E  K  :  A  E  K  A  V  A  R  T  R  E  E  K  R  I  A  E  E  V  R  K  A  K  E  A  E  A  K  M  E  L  H  Q  A  K  A  R  H  A  A  E  T  L  Q  S  K  Q  S  H  L  I  G  R  H  G  H  G  H  H  H  H  A  V  G  G  Q  Q  N  P  V  V  G  S  T  V  P  T  T  G  T  V  A  P  T  Y  P  L  G  G  Y  P  P  T  S  H  G  H  I  *  F  S  S  I  L  *  *  C  V  V  S  V  P  F  S  V  M  P  L  E  *  I  E  E  R  L  W  F  F  *  L  A  S  *  I  H  *  Q  V  Y  M  S  *  L  V  S  K  H  F  P  L  K  E  L  Y  S  L  Y  S  A  F  C  P  I  F  C  T  T  L  N  K  *  *  K  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22008" stop="22043"/>
                    <exon start="22542" stop="22835"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>327</number_coding_nucleotides>
                  <number_encoded_amino_acids>109</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HVDILKAKAEEKAEKAVARTREEKRIAEEVRKAKEAEAKMELHQAKARHAAETLQSKQSHLIGRHGHGHHHHAVGGQQNPVVGSTVPTTGTVAPTYPLGGYPPTSHGHI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="29552" PGL_stop="28889"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29552" e_stop="28889"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="29552" e_stop="28889" e_length="664"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29552" stop="28906"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349974" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29552" stop="28907"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349422" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29552" stop="28909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29547" stop="28891"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374598" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29546" stop="28889"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374599" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29546" stop="28891"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205275" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29546" stop="29015"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204861" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCAGTATCTTTTGCCATCGCCTACTGGCTTCTTAAACTTGTTATCTCCCCGTTCTCCTTATCCATTGCTTTCACCAGGTATGCAGCATCCTCCACCGCTGACACCAAATTTCTTCTTCTCTCCTATGGCTCAGCCTGGAGGTTTTGGCACTGGACCACAATTTCCTCCTTCCCCTGGTTATGGATTTCCGTTGTCACCTTCTGGGTTCTTCGCCATGTCAAGTCCAAGATGGAGGGGTCAATAGCACCACCACGAACAGAGCTGCTGATCTCGATGGATTCTTTGCTTCGAGTTTCGTCCAGGTGGTAGATTTCCTTCAAATTAAAGCTTTTTCACTGTGGATATGCAGTGTATACACTATACAATGTAAGAGATCCTTCTGAACGTGTTTATACTTTTTTTCTTTGTTTTTCTTAACATATATTTTGAATATTTGACTCTTTCAATGTAGAGTTCGTAGCAGATGTATCTCTGTATTTGCCTAGCCCTTATTTAGTACATTTAGCAACTCTCAACTGAACAGTTGAAAAGGTCAGGCTTGTTAGATTATAGTTAATTGTATTTTATATGTAGCTGGAAAGGTTCTTGTATTCCTTGTAATGTCAATTTTGGGATCAAATATTTTGGTTCTTTTTCCTATCATATAGATCAATTTTCAGTTTGT</gDNA_template>
            <first_frame> S  V  S  F  A  I  A  Y  W  L  L  K  L  V  I  S  P  F  S  L  S  I  A  F  T  R  Y  A  A  S  S  T  A  D  T  K  F  L  L  L  S  Y  G  S  A  W  R  F  W  H  W  T  T  I  S  S  F  P  W  L  W  I  S  V  V  T  F  W  V  L  R  H  V  K  S  K  M  E  G  S  I  A  P  P  R  T  E  L  L  I  S  M  D  S  L  L  R  V  S  S  R  W  *  I  S  F  K  L  K  L  F  H  C  G  Y  A  V  Y  T  L  Y  N  V  R  D  P  S  E  R  V  Y  T  F  F  L  C  F  S  *  H  I  F  *  I  F  D  S  F  N  V  E  F  V  A  D  V  S  L  Y  L  P  S  P  Y  L  V  H  L  A  T  L  N  *  T  V  E  K  V  R  L  V  R  L  *  L  I  V  F  Y  M  *  L  E  R  F  L  Y  S  L  *  C  Q  F  W  D  Q  I  F  W  F  F  F  L  S  Y  R  S  I  F  S  L  </first_frame>
            <second_frame>  Q  Y  L  L  P  S  P  T  G  F  L  N  L  L  S  P  R  S  P  Y  P  L  L  S  P  G  M  Q  H  P  P  P  L  T  P  N  F  F  F  S  P  M  A  Q  P  G  G  F  G  T  G  P  Q  F  P  P  S  P  G  Y  G  F  P  L  S  P  S  G  F  F  A  M  S  S  P  R  W  R  G  Q  *  H  H  H  E  Q  S  C  *  S  R  W  I  L  C  F  E  F  R  P  G  G  R  F  P  S  N  *  S  F  F  T  V  D  M  Q  C  I  H  Y  T  M  *  E  I  L  L  N  V  F  I  L  F  F  F  V  F  L  N  I  Y  F  E  Y  L  T  L  S  M  *  S  S  *  Q  M  Y  L  C  I  C  L  A  L  I  *  Y  I  *  Q  L  S  T  E  Q  L  K  R  S  G  L  L  D  Y  S  *  L  Y  F  I  C  S  W  K  G  S  C  I  P  C  N  V  N  F  G  I  K  Y  F  G  S  F  S  Y  H  I  D  Q  F  S  V  C </second_frame>
            <third_frame>   S  I  F  C  H  R  L  L  A  S  *  T  C  Y  L  P  V  L  L  I  H  C  F  H  Q  V  C  S  I  L  H  R  *  H  Q  I  S  S  S  L  L  W  L  S  L  E  V  L  A  L  D  H  N  F  L  L  P  L  V  M  D  F  R  C  H  L  L  G  S  S  P  C  Q  V  Q  D  G  G  V  N  S  T  T  T  N  R  A  A  D  L  D  G  F  F  A  S  S  F  V  Q  V  V  D  F  L  Q  I  K  A  F  S  L  W  I  C  S  V  Y  T  I  Q  C  K  R  S  F  *  T  C  L  Y  F  F  S  L  F  F  L  T  Y  I  L  N  I  *  L  F  Q  C  R  V  R  S  R  C  I  S  V  F  A  *  P  L  F  S  T  F  S  N  S  Q  L  N  S  *  K  G  Q  A  C  *  I  I  V  N  C  I  L  Y  V  A  G  K  V  L  V  F  L  V  M  S  I  L  G  S  N  I  L  V  L  F  P  I  I  *  I  N  F  Q  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29552" stop="29244"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>306</number_coding_nucleotides>
                  <number_encoded_amino_acids>102</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SVSFAIAYWLLKLVISPFSLSIAFTRYAASSTADTKFLLLSYGSAWRFWHWTTISSFPWLWISVVTFWVLRHVKSKMEGSIAPPRTELLISMDSLLRVSSRW*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29451" stop="29170"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HQISSSLLWLSLEVLALDHNFLLPLVMDFRCHLLGSSPCQVQDGGVNSTTTNRAADLDGFFASSFVQVVDFLQIKAFSLWICSVYTIQCKRSF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29551" stop="29309"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QYLLPSPTGFLNLLSPRSPYPLLSPGMQHPPPLTPNFFFSPMAQPGGFGTGPQFPPSPGYGFPLSPSGFFAMSSPRWRGQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="30897" PGL_stop="30314"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30897" e_stop="30314"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="30897" e_stop="30314" e_length="584"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30897" stop="30314"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212183" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAATTTTTAGGGTTGTTTTGTTCTCTGTTTTGCTCGTTTGGACTCAAGTATTTGTAAAGTAAAAAAACTGTATGTTGTTTCTTTTTTGGAAGAGTTCGGTGATATATAATATTTGGGAAATAAATACTTTGTGGGACGAATAAAGTTGTGTTTTTGGGAATTCAGAAGTTATTTTTTTCTAACTGAAGCAGAAGTTTGTTTGGAGCTGAAGCTGGTTGGTTGATCTATGGGTGTTACTGTTTGTGGTGATAGTTCTTCAATTTCAAGTGTAAAGTTTGCTGTTATCATAATGCTGCTTCAGACCCTTTTCGGATTTGTTTTAAGTTTGGAGAGTTAAGGGTGTTATATCTTAAATTCAAAGTGTATATCTGCATAGGCAGAAGAAGGTCAATTGCAGTGATATAAGGTTTCAGTTGCAGTGTTGAGTAGGGTGTTAACGATAGTATATTTTGGAGTTTAGTCATTTTATTGAAGTGTCTGAGATGGATAATTCAAATCGGTCGTACAATAGGAATGCTGATCATTTGGGTGTGAATAAATTTGGGAAGAATATCAACAAGAGTCCTATACACCAACCTAATTTT</gDNA_template>
            <first_frame> K  F  L  G  L  F  C  S  L  F  C  S  F  G  L  K  Y  L  *  S  K  K  T  V  C  C  F  F  F  G  R  V  R  *  Y  I  I  F  G  K  *  I  L  C  G  T  N  K  V  V  F  L  G  I  Q  K  L  F  F  S  N  *  S  R  S  L  F  G  A  E  A  G  W  L  I  Y  G  C  Y  C  L  W  *  *  F  F  N  F  K  C  K  V  C  C  Y  H  N  A  A  S  D  P  F  R  I  C  F  K  F  G  E  L  R  V  L  Y  L  K  F  K  V  Y  I  C  I  G  R  R  R  S  I  A  V  I  *  G  F  S  C  S  V  E  *  G  V  N  D  S  I  F  W  S  L  V  I  L  L  K  C  L  R  W  I  I  Q  I  G  R  T  I  G  M  L  I  I  W  V  *  I  N  L  G  R  I  S  T  R  V  L  Y  T  N  L  I   </first_frame>
            <second_frame>  N  F  *  G  C  F  V  L  C  F  A  R  L  D  S  S  I  C  K  V  K  K  L  Y  V  V  S  F  L  E  E  F  G  D  I  *  Y  L  G  N  K  Y  F  V  G  R  I  K  L  C  F  W  E  F  R  S  Y  F  F  L  T  E  A  E  V  C  L  E  L  K  L  V  G  *  S  M  G  V  T  V  C  G  D  S  S  S  I  S  S  V  K  F  A  V  I  I  M  L  L  Q  T  L  F  G  F  V  L  S  L  E  S  *  G  C  Y  I  L  N  S  K  C  I  S  A  *  A  E  E  G  Q  L  Q  *  Y  K  V  S  V  A  V  L  S  R  V  L  T  I  V  Y  F  G  V  *  S  F  Y  *  S  V  *  D  G  *  F  K  S  V  V  Q  *  E  C  *  S  F  G  C  E  *  I  W  E  E  Y  Q  Q  E  S  Y  T  P  T  *  F  </second_frame>
            <third_frame>   I  F  R  V  V  L  F  S  V  L  L  V  W  T  Q  V  F  V  K  *  K  N  C  M  L  F  L  F  W  K  S  S  V  I  Y  N  I  W  E  I  N  T  L  W  D  E  *  S  C  V  F  G  N  S  E  V  I  F  F  *  L  K  Q  K  F  V  W  S  *  S  W  L  V  D  L  W  V  L  L  F  V  V  I  V  L  Q  F  Q  V  *  S  L  L  L  S  *  C  C  F  R  P  F  S  D  L  F  *  V  W  R  V  K  G  V  I  S  *  I  Q  S  V  Y  L  H  R  Q  K  K  V  N  C  S  D  I  R  F  Q  L  Q  C  *  V  G  C  *  R  *  Y  I  L  E  F  S  H  F  I  E  V  S  E  M  D  N  S  N  R  S  Y  N  R  N  A  D  H  L  G  V  N  K  F  G  K  N  I  N  K  S  P  I  H  Q  P  N  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0024F02.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="71321" PGL_stop="53526"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="66150" e_stop="65910"/>
            <exon e_start="62827" e_stop="62650"/>
            <exon e_start="62280" e_stop="62190"/>
            <exon e_start="60329" e_stop="60235"/>
            <exon e_start="60007" e_stop="59915"/>
            <exon e_start="59825" e_stop="59777"/>
            <exon e_start="59706" e_stop="59568"/>
            <exon e_start="57932" e_stop="57816"/>
            <exon e_start="57145" e_stop="57055"/>
            <exon e_start="56953" e_stop="56811"/>
            <exon e_start="54950" e_stop="54836"/>
            <exon e_start="54044" e_stop="54000"/>
            <exon e_start="53925" e_stop="53526"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.588" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.062" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.825" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.609" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="66150" e_stop="65910" e_length="241"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="65909" i_stop="62828" i_length="3082"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="62827" e_stop="62650" e_length="178"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="62649" i_stop="62281" i_length="369"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="62280" e_stop="62190" e_length="91"/>
          </exon>
          <intron i_serial="3" don_prob="0.986" acc_prob="0.588">
            <gDNA_intron_boundary i_start="62189" i_stop="60330" i_length="1860"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="60329" e_stop="60235" e_length="95"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.000">
            <gDNA_intron_boundary i_start="60234" i_stop="60008" i_length="227"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="60007" e_stop="59915" e_length="93"/>
          </exon>
          <intron i_serial="5" don_prob="0.974" acc_prob="0.993">
            <gDNA_intron_boundary i_start="59914" i_stop="59826" i_length="89"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="59825" e_stop="59777" e_length="49"/>
          </exon>
          <intron i_serial="6" don_prob="0.062" acc_prob="0.000">
            <gDNA_intron_boundary i_start="59776" i_stop="59707" i_length="70"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="59706" e_stop="59568" e_length="139"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.987">
            <gDNA_intron_boundary i_start="59567" i_stop="57933" i_length="1635"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="57932" e_stop="57816" e_length="117"/>
          </exon>
          <intron i_serial="8" don_prob="1.000" acc_prob="0.984">
            <gDNA_intron_boundary i_start="57815" i_stop="57146" i_length="670"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="57145" e_stop="57055" e_length="91"/>
          </exon>
          <intron i_serial="9" don_prob="0.973" acc_prob="0.998">
            <gDNA_intron_boundary i_start="57054" i_stop="56954" i_length="101"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="56953" e_stop="56811" e_length="143"/>
          </exon>
          <intron i_serial="10" don_prob="0.825" acc_prob="0.999">
            <gDNA_intron_boundary i_start="56810" i_stop="54951" i_length="1860"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="54950" e_stop="54836" e_length="115"/>
          </exon>
          <intron i_serial="11" don_prob="0.609" acc_prob="0.973">
            <gDNA_intron_boundary i_start="54835" i_stop="54045" i_length="791"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="54044" e_stop="54000" e_length="45"/>
          </exon>
          <intron i_serial="12" don_prob="0.900" acc_prob="0.994">
            <gDNA_intron_boundary i_start="53999" i_stop="53926" i_length="74"/>
          </intron>
          <exon e_serial="13" e_score="0.993">
            <gDNA_exon_boundary e_start="53925" e_stop="53526" e_length="400"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66150" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301652" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66145" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203306" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66144" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66133" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60267"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313772" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66127" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60235"/>
              <exon start="60007" stop="59915"/>
              <exon start="59825" stop="59777"/>
              <exon start="59706" stop="59629"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701744" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66116" stop="65910"/>
              <exon start="62827" stop="62791"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66079" stop="65910"/>
              <exon start="62827" stop="62659"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66050" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60235"/>
              <exon start="60007" stop="59945"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253193" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66050" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60235"/>
              <exon start="60007" stop="59958"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253021" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62740" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60235"/>
              <exon start="60007" stop="59956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250441" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62709" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60235"/>
              <exon start="60007" stop="59915"/>
              <exon start="59825" stop="59777"/>
              <exon start="59706" stop="59568"/>
              <exon start="57932" stop="57816"/>
              <exon start="57145" stop="57117"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697662" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62683" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60235"/>
              <exon start="60007" stop="59915"/>
              <exon start="59825" stop="59777"/>
              <exon start="59706" stop="59568"/>
              <exon start="57932" stop="57863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250420" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59821" stop="59777"/>
              <exon start="59706" stop="59568"/>
              <exon start="57932" stop="57816"/>
              <exon start="57145" stop="57055"/>
              <exon start="56953" stop="56825"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276498" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59692" stop="59568"/>
              <exon start="57932" stop="57841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269856" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59681" stop="59568"/>
              <exon start="57932" stop="57816"/>
              <exon start="57145" stop="57055"/>
              <exon start="56953" stop="56853"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256914" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57873" stop="57816"/>
              <exon start="57145" stop="57055"/>
              <exon start="56953" stop="56811"/>
              <exon start="54950" stop="54836"/>
              <exon start="54044" stop="54000"/>
              <exon start="53925" stop="53717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213270" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57109" stop="57055"/>
              <exon start="56953" stop="56811"/>
              <exon start="54950" stop="54836"/>
              <exon start="54044" stop="54000"/>
              <exon start="53925" stop="53717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206328" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54932" stop="54836"/>
              <exon start="54044" stop="54000"/>
              <exon start="53925" stop="53526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203307" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54881" stop="54836"/>
              <exon start="54044" stop="54000"/>
              <exon start="53925" stop="53561"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228601" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54873" stop="54836"/>
              <exon start="54044" stop="54000"/>
              <exon start="53925" stop="53561"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229273" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAATTTAAGCTGTCCCCAACTGGCGACATTTCTCTCCCATCTACGACAAATCTAACTGTTCTTCCCTACGTTTTTCATTTCATTATTATTGAAGAACCTTTCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGG : GGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAG : GCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATG : AAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTCCGCTCACCCTTTTCGTCAAAG : CAGCCTTTGGATAAACCAGTTCCAAACGCCACATTACAAGTCACGGGCGCTGTTGGTTGGCGCAGGGAGGGTCTTGTTTATAAGAAGAATGAG : GTGTTTCTGGATATAGTAGAAAGTGTTAATCTCCTTATGTCTTCAAAAG : GTAGTGTGCTCCGTTGTGATGTAACTGGGAAAGTTCTCATGAAATGCTTTCTTTCTGGAATGCCTGATTTGAAGTTGGGGTTAAATGATAAAATTGGTCTTGAGAAAGAGTCGCAGCTTAAATCCCGTCCAACAAAGAG : CGGAAAGACTATTGAACTTGATGATGTTACTTTCCACCAATGTGTAAACTTAACGAGATTCAATTCAGAAAAGACTGTCAGCTTTGTACCACCAGATGGTGAATTCGAACTGATGAA : GTACCGCATTACCGAAGGAGTAAATCTTCCTTTCCGTGTATTGCCAACAATCAAGGAATTAGGTCGTACGCGAATGGAAGTGAATGTTAAG : GTTAAGAGTGTGTTTGGTGCAAAAATGTTTGCTCTTGGAGTTGTCATTAAAGTTCCAGTGCCAAAGCAAACTGCAAAAGCAAGCTTCCAGGTGACATCAGGGAGAGCAAAGTACAATCCATCCATTGACTCTTTGGTGTGGAA : GATAAAAAAATTTCCTGGGCAAACTGAGTCAACAATGAGTGCTGAAGTGGAGTTGATTTCGACAATAGCAGAGAAGAAGTCCTGGACTAGGCCACCAATTCAGATGGAATTCCAG : GTTCCCATGTTTACGGCATCTGGACTTCGAGTTCGCTTTCTCAAG : GTATGGGAAAAGAGCGGCTACAACACAGTTGAATGGGTTCGCTATATCACAAAAGCTGGTTCTTATGAGATTAGGTGCTGAAAAATAGGTAAGCTGATCTTTTTTATAGGATCAGTATTATGGAAGCCCAAGGTATAGGGGCGCCATTTTGTTATGCAGGAAATGCAACTTATGCATCTTGTATTTTGAGGGCTTTTAAACATGGTTTGTCTATAGTATATTTGTCCCGTGAAATTCATTGTTCTGTTGTACAGGTTAGTTCTTTACGAGGACTAAGAAGAGGCTTTTGTTTCCATTCTATTTGTATATTTGACATATTCCCCCTTAAACTATTTTTCCATTGAACTAATGAAAACCATGGGAGATCAAGGTGTTCCTTCAACGAATTAAGAAAAAACCC</gDNA_template>
            <first_frame> E  F  K  L  S  P  T  G  D  I  S  L  P  S  T  T  N  L  T  V  L  P  Y  V  F  H  F  I  I  I  E  E  P  F  E  S  F  R  S  D  L  I  E  V  S  R  S  I  S  V  L  Q  P  C  L  W  Q  L  Q  L  F  T  S  S  I  S  V  A  M  S  S  S  I  V  Y  T  V  T  T  S   : G  V  I  W  *  M  P  F  G  C  I  *  C  R  Q  K  N  S  G  H  V  L  S  G  R  L  E  V  A  L  S  S  T  *  E  L  A  M  S  I  L  *  L  *  L  A  P  M  Q  M  S  H  V  H  S  S  L  W  L  R :   L  L  H  Y  S  N  L  I  L  V  V  L  L  T  K  M  P  F  V  I  T  L  S  *  F  T  S  F  W  M  :  K  *  W  T  L  V  T  L  K  I  F  H  L  K  S  *  N  S  I  L  L  R  K  G  S  A  H  P  F  R  Q  S :   S  L  W  I  N  Q  F  Q  T  P  H  Y  K  S  R  A  L  L  V  G  A  G  R  V  L  F  I  R  R  M  R :   C  F  W  I  *  *  K  V  L  I  S  L  C  L  Q  K  :  V  V  C  S  V  V  M  *  L  G  K  F  S  *  N  A  F  F  L  E  C  L  I  *  S  W  G  *  M  I  K  L  V  L  R  K  S  R  S  L  N  P  V  Q  Q  R   : A  E  R  L  L  N  L  M  M  L  L  S  T  N  V  *  T  *  R  D  S  I  Q  K  R  L  S  A  L  Y  H  Q  M  V  N  S  N  *  *   : S  T  A  L  P  K  E  *  I  F  L  S  V  Y  C  Q  Q  S  R  N  *  V  V  R  E  W  K  *  M  L  R :   L  R  V  C  L  V  Q  K  C  L  L  L  E  L  S  L  K  F  Q  C  Q  S  K  L  Q  K  Q  A  S  R  *  H  Q  G  E  Q  S  T  I  H  P  L  T  L  W  C  G   : R  *  K  N  F  L  G  K  L  S  Q  Q  *  V  L  K  W  S  *  F  R  Q  *  Q  R  R  S  P  G  L  G  H  Q  F  R  W  N  S  R :   F  P  C  L  R  H  L  D  F  E  F  A  F  S  R :   Y  G  K  R  A  A  T  T  Q  L  N  G  F  A  I  S  Q  K  L  V  L  M  R  L  G  A  E  K  *  V  S  *  S  F  L  *  D  Q  Y  Y  G  S  P  R  Y  R  G  A  I  L  L  C  R  K  C  N  L  C  I  L  Y  F  E  G  F  *  T  W  F  V  Y  S  I  F  V  P  *  N  S  L  F  C  C  T  G  *  F  F  T  R  T  K  K  R  L  L  F  P  F  Y  L  Y  I  *  H  I  P  P  *  T  I  F  P  L  N  *  *  K  P  W  E  I  K  V  F  L  Q  R  I  K  K  K  P </first_frame>
            <second_frame>  N  L  S  C  P  Q  L  A  T  F  L  S  H  L  R  Q  I  *  L  F  F  P  T  F  F  I  S  L  L  L  K  N  L  S  N  H  L  D  L  T  *  S  K  F  L  D  P  F  R  C  C  S  H  A  C  G  S  F  S  C  L  L  P  Q  S  P  W  R  C  P  H  Q  S  S  I  P  *  R  R  R  :  G  *  Y  G  R  C  L  S  D  A  Y  N  A  D  K  R  T  R  D  M  S  C  Q  A  D  W  R  L  L  F  L  L  H  E  N  *  Q  C  L  Y  C  D  C  S  *  H  Q  C  K  C  R  M  C  I  Q  V  C  G  *   : G  C  C  T  I  Q  I  L  F  W  W  F  F  *  R  R  C  H  S  *  *  L  C  P  N  L  R  A  F  G  * :   N  N  G  L  W  L  P  S  K  S  F  T  *  N  L  E  T  L  Y  Y  S  G  R  G  P  L  T  L  F  V  K   : A  A  F  G  *  T  S  S  K  R  H  I  T  S  H  G  R  C  W  L  A  Q  G  G  S  C  L  *  E  E  *   : G  V  S  G  Y  S  R  K  C  *  S  P  Y  V  F  K  R :   *  C  A  P  L  *  C  N  W  E  S  S  H  E  M  L  S  F  W  N  A  *  F  E  V  G  V  K  *  *  N  W  S  *  E  R  V  A  A  *  I  P  S  N  K  E  :  R  K  D  Y  *  T  *  *  C  Y  F  P  P  M  C  K  L  N  E  I  Q  F  R  K  D  C  Q  L  C  T  T  R  W  *  I  R  T  D  E  :  V  P  H  Y  R  R  S  K  S  S  F  P  C  I  A  N  N  Q  G  I  R  S  Y  A  N  G  S  E  C  *   : G  *  E  C  V  W  C  K  N  V  C  S  W  S  C  H  *  S  S  S  A  K  A  N  C  K  S  K  L  P  G  D  I  R  E  S  K  V  Q  S  I  H  *  L  F  G  V  E  :  D  K  K  I  S  W  A  N  *  V  N  N  E  C  *  S  G  V  D  F  D  N  S  R  E  E  V  L  D  *  A  T  N  S  D  G  I  P   : G  S  H  V  Y  G  I  W  T  S  S  S  L  S  Q   : G  M  G  K  E  R  L  Q  H  S  *  M  G  S  L  Y  H  K  S  W  F  L  *  D  *  V  L  K  N  R  *  A  D  L  F  Y  R  I  S  I  M  E  A  Q  G  I  G  A  P  F  C  Y  A  G  N  A  T  Y  A  S  C  I  L  R  A  F  K  H  G  L  S  I  V  Y  L  S  R  E  I  H  C  S  V  V  Q  V  S  S  L  R  G  L  R  R  G  F  C  F  H  S  I  C  I  F  D  I  F  P  L  K  L  F  F  H  *  T  N  E  N  H  G  R  S  R  C  S  F  N  E  L  R  K  N   </second_frame>
            <third_frame>   I  *  A  V  P  N  W  R  H  F  S  P  I  Y  D  K  S  N  C  S  S  L  R  F  S  F  H  Y  Y  *  R  T  F  R  I  I  *  I  *  L  D  R  S  F  *  I  H  F  G  V  A  A  M  P  V  A  A  S  A  V  Y  F  L  N  L  R  G  D  V  L  I  N  R  L  Y  R  D  D  V  G :   G  N  M  V  D  A  F  R  M  H  I  M  Q  T  K  E  L  G  T  C  P  V  R  Q  I  G  G  C  S  F  F  Y  M  R  I  S  N  V  Y  I  V  I  V  V  S  T  N  A  N  V  A  C  A  F  K  F  V  V  E  :  A  V  A  L  F  K  S  Y  F  G  G  S  F  D  E  D  A  I  R  N  N  F  V  L  I  Y  E  L  L  D   : E  I  M  D  F  G  Y  P  Q  N  L  S  P  E  I  L  K  L  Y  I  T  Q  E  G  V  R  S  P  F  S  S  K  :  Q  P  L  D  K  P  V  P  N  A  T  L  Q  V  T  G  A  V  G  W  R  R  E  G  L  V  Y  K  K  N  E  :  V  F  L  D  I  V  E  S  V  N  L  L  M  S  S  K   : G  S  V  L  R  C  D  V  T  G  K  V  L  M  K  C  F  L  S  G  M  P  D  L  K  L  G  L  N  D  K  I  G  L  E  K  E  S  Q  L  K  S  R  P  T  K  S :   G  K  T  I  E  L  D  D  V  T  F  H  Q  C  V  N  L  T  R  F  N  S  E  K  T  V  S  F  V  P  P  D  G  E  F  E  L  M  K :   Y  R  I  T  E  G  V  N  L  P  F  R  V  L  P  T  I  K  E  L  G  R  T  R  M  E  V  N  V  K  :  V  K  S  V  F  G  A  K  M  F  A  L  G  V  V  I  K  V  P  V  P  K  Q  T  A  K  A  S  F  Q  V  T  S  G  R  A  K  Y  N  P  S  I  D  S  L  V  W  K :   I  K  K  F  P  G  Q  T  E  S  T  M  S  A  E  V  E  L  I  S  T  I  A  E  K  K  S  W  T  R  P  P  I  Q  M  E  F  Q  :  V  P  M  F  T  A  S  G  L  R  V  R  F  L  K  :  V  W  E  K  S  G  Y  N  T  V  E  W  V  R  Y  I  T  K  A  G  S  Y  E  I  R  C  *  K  I  G  K  L  I  F  F  I  G  S  V  L  W  K  P  K  V  *  G  R  H  F  V  M  Q  E  M  Q  L  M  H  L  V  F  *  G  L  L  N  M  V  C  L  *  Y  I  C  P  V  K  F  I  V  L  L  Y  R  L  V  L  Y  E  D  *  E  E  A  F  V  S  I  L  F  V  Y  L  T  Y  S  P  L  N  Y  F  S  I  E  L  M  K  T  M  G  D  Q  G  V  P  S  T  N  *  E  K  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66013" stop="65910"/>
                    <exon start="62827" stop="62650"/>
                    <exon start="62280" stop="62190"/>
                    <exon start="60329" stop="60235"/>
                    <exon start="60007" stop="59915"/>
                    <exon start="59825" stop="59777"/>
                    <exon start="59706" stop="59568"/>
                    <exon start="57932" stop="57816"/>
                    <exon start="57145" stop="57055"/>
                    <exon start="56953" stop="56811"/>
                    <exon start="54950" stop="54836"/>
                    <exon start="54044" stop="54000"/>
                    <exon start="53925" stop="53845"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1338</number_coding_nucleotides>
                  <number_encoded_amino_acids>446</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IHFGVAAMPVAASAVYFLNLRGDVLINRLYRDDVGGNMVDAFRMHIMQTKELGTCPVRQIGGCSFFYMRISNVYIVIVVSTNANVACAFKFVVEAVALFKSYFGGSFDEDAIRNNFVLIYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKQPLDKPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKVLMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKELGRTRMEVNVKVKSVFGAKMFALGVVIKVPVPKQTAKASFQVTSGRAKYNPSIDSLVWKIKKFPGQTESTMSAEVELISTIAEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITKAGSYEIRC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53833" stop="53582"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ADLFYRISIMEAQGIGAPFCYAGNATYASCILRAFKHGLSIVYLSREIHCSVVQVSSLRGLRRGFCFHSICIFDIFPLKLFFH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="66150" e_stop="65910"/>
            <exon e_start="62827" e_stop="62650"/>
            <exon e_start="62280" e_stop="62190"/>
            <exon e_start="60329" e_stop="60235"/>
            <exon e_start="60007" e_stop="59915"/>
            <exon e_start="59825" e_stop="59777"/>
            <exon e_start="59702" e_stop="59568"/>
            <exon e_start="57932" e_stop="57816"/>
            <exon e_start="57145" e_stop="57055"/>
            <exon e_start="56953" e_stop="56811"/>
            <exon e_start="54950" e_stop="54836"/>
            <exon e_start="54044" e_stop="54000"/>
            <exon e_start="53925" e_stop="53526"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.588" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.062" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.825" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.609" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="66150" e_stop="65910" e_length="241"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="65909" i_stop="62828" i_length="3082"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="62827" e_stop="62650" e_length="178"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="62649" i_stop="62281" i_length="369"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="62280" e_stop="62190" e_length="91"/>
          </exon>
          <intron i_serial="3" don_prob="0.986" acc_prob="0.588">
            <gDNA_intron_boundary i_start="62189" i_stop="60330" i_length="1860"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="60329" e_stop="60235" e_length="95"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.000">
            <gDNA_intron_boundary i_start="60234" i_stop="60008" i_length="227"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="60007" e_stop="59915" e_length="93"/>
          </exon>
          <intron i_serial="5" don_prob="0.974" acc_prob="0.993">
            <gDNA_intron_boundary i_start="59914" i_stop="59826" i_length="89"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="59825" e_stop="59777" e_length="49"/>
          </exon>
          <intron i_serial="6" don_prob="0.062" acc_prob="0.000">
            <gDNA_intron_boundary i_start="59776" i_stop="59703" i_length="74"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="59702" e_stop="59568" e_length="135"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.987">
            <gDNA_intron_boundary i_start="59567" i_stop="57933" i_length="1635"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="57932" e_stop="57816" e_length="117"/>
          </exon>
          <intron i_serial="8" don_prob="1.000" acc_prob="0.984">
            <gDNA_intron_boundary i_start="57815" i_stop="57146" i_length="670"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="57145" e_stop="57055" e_length="91"/>
          </exon>
          <intron i_serial="9" don_prob="0.973" acc_prob="0.998">
            <gDNA_intron_boundary i_start="57054" i_stop="56954" i_length="101"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="56953" e_stop="56811" e_length="143"/>
          </exon>
          <intron i_serial="10" don_prob="0.825" acc_prob="0.999">
            <gDNA_intron_boundary i_start="56810" i_stop="54951" i_length="1860"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="54950" e_stop="54836" e_length="115"/>
          </exon>
          <intron i_serial="11" don_prob="0.609" acc_prob="0.973">
            <gDNA_intron_boundary i_start="54835" i_stop="54045" i_length="791"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="54044" e_stop="54000" e_length="45"/>
          </exon>
          <intron i_serial="12" don_prob="0.900" acc_prob="0.994">
            <gDNA_intron_boundary i_start="53999" i_stop="53926" i_length="74"/>
          </intron>
          <exon e_serial="13" e_score="0.993">
            <gDNA_exon_boundary e_start="53925" e_stop="53526" e_length="400"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66150" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301652" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66145" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203306" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66144" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66133" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60267"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313772" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66116" stop="65910"/>
              <exon start="62827" stop="62791"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66079" stop="65910"/>
              <exon start="62827" stop="62659"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66050" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60235"/>
              <exon start="60007" stop="59945"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253193" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66050" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60235"/>
              <exon start="60007" stop="59958"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253021" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62740" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60235"/>
              <exon start="60007" stop="59956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250441" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59982" stop="59915"/>
              <exon start="59825" stop="59777"/>
              <exon start="59702" stop="59568"/>
              <exon start="57932" stop="57816"/>
              <exon start="57145" stop="57055"/>
              <exon start="56953" stop="56811"/>
              <exon start="54950" stop="54836"/>
              <exon start="54044" stop="54000"/>
              <exon start="53925" stop="53861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706223" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59692" stop="59568"/>
              <exon start="57932" stop="57841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269856" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59681" stop="59568"/>
              <exon start="57932" stop="57816"/>
              <exon start="57145" stop="57055"/>
              <exon start="56953" stop="56853"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256914" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57873" stop="57816"/>
              <exon start="57145" stop="57055"/>
              <exon start="56953" stop="56811"/>
              <exon start="54950" stop="54836"/>
              <exon start="54044" stop="54000"/>
              <exon start="53925" stop="53717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213270" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57109" stop="57055"/>
              <exon start="56953" stop="56811"/>
              <exon start="54950" stop="54836"/>
              <exon start="54044" stop="54000"/>
              <exon start="53925" stop="53717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206328" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54932" stop="54836"/>
              <exon start="54044" stop="54000"/>
              <exon start="53925" stop="53526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203307" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54881" stop="54836"/>
              <exon start="54044" stop="54000"/>
              <exon start="53925" stop="53561"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228601" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54873" stop="54836"/>
              <exon start="54044" stop="54000"/>
              <exon start="53925" stop="53561"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229273" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAATTTAAGCTGTCCCCAACTGGCGACATTTCTCTCCCATCTACGACAAATCTAACTGTTCTTCCCTACGTTTTTCATTTCATTATTATTGAAGAACCTTTCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGG : GGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAG : GCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATG : AAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTCCGCTCACCCTTTTCGTCAAAG : CAGCCTTTGGATAAACCAGTTCCAAACGCCACATTACAAGTCACGGGCGCTGTTGGTTGGCGCAGGGAGGGTCTTGTTTATAAGAAGAATGAG : GTGTTTCTGGATATAGTAGAAAGTGTTAATCTCCTTATGTCTTCAAAAG : TGTGCTCCGTTGTGATGTAACTGGGAAAGTTCTCATGAAATGCTTTCTTTCTGGAATGCCTGATTTGAAGTTGGGGTTAAATGATAAAATTGGTCTTGAGAAAGAGTCGCAGCTTAAATCCCGTCCAACAAAGAG : CGGAAAGACTATTGAACTTGATGATGTTACTTTCCACCAATGTGTAAACTTAACGAGATTCAATTCAGAAAAGACTGTCAGCTTTGTACCACCAGATGGTGAATTCGAACTGATGAA : GTACCGCATTACCGAAGGAGTAAATCTTCCTTTCCGTGTATTGCCAACAATCAAGGAATTAGGTCGTACGCGAATGGAAGTGAATGTTAAG : GTTAAGAGTGTGTTTGGTGCAAAAATGTTTGCTCTTGGAGTTGTCATTAAAGTTCCAGTGCCAAAGCAAACTGCAAAAGCAAGCTTCCAGGTGACATCAGGGAGAGCAAAGTACAATCCATCCATTGACTCTTTGGTGTGGAA : GATAAAAAAATTTCCTGGGCAAACTGAGTCAACAATGAGTGCTGAAGTGGAGTTGATTTCGACAATAGCAGAGAAGAAGTCCTGGACTAGGCCACCAATTCAGATGGAATTCCAG : GTTCCCATGTTTACGGCATCTGGACTTCGAGTTCGCTTTCTCAAG : GTATGGGAAAAGAGCGGCTACAACACAGTTGAATGGGTTCGCTATATCACAAAAGCTGGTTCTTATGAGATTAGGTGCTGAAAAATAGGTAAGCTGATCTTTTTTATAGGATCAGTATTATGGAAGCCCAAGGTATAGGGGCGCCATTTTGTTATGCAGGAAATGCAACTTATGCATCTTGTATTTTGAGGGCTTTTAAACATGGTTTGTCTATAGTATATTTGTCCCGTGAAATTCATTGTTCTGTTGTACAGGTTAGTTCTTTACGAGGACTAAGAAGAGGCTTTTGTTTCCATTCTATTTGTATATTTGACATATTCCCCCTTAAACTATTTTTCCATTGAACTAATGAAAACCATGGGAGATCAAGGTGTTCCTTCAACGAATTAAGAAAAAACCC</gDNA_template>
            <first_frame> E  F  K  L  S  P  T  G  D  I  S  L  P  S  T  T  N  L  T  V  L  P  Y  V  F  H  F  I  I  I  E  E  P  F  E  S  F  R  S  D  L  I  E  V  S  R  S  I  S  V  L  Q  P  C  L  W  Q  L  Q  L  F  T  S  S  I  S  V  A  M  S  S  S  I  V  Y  T  V  T  T  S   : G  V  I  W  *  M  P  F  G  C  I  *  C  R  Q  K  N  S  G  H  V  L  S  G  R  L  E  V  A  L  S  S  T  *  E  L  A  M  S  I  L  *  L  *  L  A  P  M  Q  M  S  H  V  H  S  S  L  W  L  R :   L  L  H  Y  S  N  L  I  L  V  V  L  L  T  K  M  P  F  V  I  T  L  S  *  F  T  S  F  W  M  :  K  *  W  T  L  V  T  L  K  I  F  H  L  K  S  *  N  S  I  L  L  R  K  G  S  A  H  P  F  R  Q  S :   S  L  W  I  N  Q  F  Q  T  P  H  Y  K  S  R  A  L  L  V  G  A  G  R  V  L  F  I  R  R  M  R :   C  F  W  I  *  *  K  V  L  I  S  L  C  L  Q  K  :  C  A  P  L  *  C  N  W  E  S  S  H  E  M  L  S  F  W  N  A  *  F  E  V  G  V  K  *  *  N  W  S  *  E  R  V  A  A  *  I  P  S  N  K  E  :  R  K  D  Y  *  T  *  *  C  Y  F  P  P  M  C  K  L  N  E  I  Q  F  R  K  D  C  Q  L  C  T  T  R  W  *  I  R  T  D  E  :  V  P  H  Y  R  R  S  K  S  S  F  P  C  I  A  N  N  Q  G  I  R  S  Y  A  N  G  S  E  C  *   : G  *  E  C  V  W  C  K  N  V  C  S  W  S  C  H  *  S  S  S  A  K  A  N  C  K  S  K  L  P  G  D  I  R  E  S  K  V  Q  S  I  H  *  L  F  G  V  E  :  D  K  K  I  S  W  A  N  *  V  N  N  E  C  *  S  G  V  D  F  D  N  S  R  E  E  V  L  D  *  A  T  N  S  D  G  I  P   : G  S  H  V  Y  G  I  W  T  S  S  S  L  S  Q   : G  M  G  K  E  R  L  Q  H  S  *  M  G  S  L  Y  H  K  S  W  F  L  *  D  *  V  L  K  N  R  *  A  D  L  F  Y  R  I  S  I  M  E  A  Q  G  I  G  A  P  F  C  Y  A  G  N  A  T  Y  A  S  C  I  L  R  A  F  K  H  G  L  S  I  V  Y  L  S  R  E  I  H  C  S  V  V  Q  V  S  S  L  R  G  L  R  R  G  F  C  F  H  S  I  C  I  F  D  I  F  P  L  K  L  F  F  H  *  T  N  E  N  H  G  R  S  R  C  S  F  N  E  L  R  K  N   </first_frame>
            <second_frame>  N  L  S  C  P  Q  L  A  T  F  L  S  H  L  R  Q  I  *  L  F  F  P  T  F  F  I  S  L  L  L  K  N  L  S  N  H  L  D  L  T  *  S  K  F  L  D  P  F  R  C  C  S  H  A  C  G  S  F  S  C  L  L  P  Q  S  P  W  R  C  P  H  Q  S  S  I  P  *  R  R  R  :  G  *  Y  G  R  C  L  S  D  A  Y  N  A  D  K  R  T  R  D  M  S  C  Q  A  D  W  R  L  L  F  L  L  H  E  N  *  Q  C  L  Y  C  D  C  S  *  H  Q  C  K  C  R  M  C  I  Q  V  C  G  *   : G  C  C  T  I  Q  I  L  F  W  W  F  F  *  R  R  C  H  S  *  *  L  C  P  N  L  R  A  F  G  * :   N  N  G  L  W  L  P  S  K  S  F  T  *  N  L  E  T  L  Y  Y  S  G  R  G  P  L  T  L  F  V  K   : A  A  F  G  *  T  S  S  K  R  H  I  T  S  H  G  R  C  W  L  A  Q  G  G  S  C  L  *  E  E  *   : G  V  S  G  Y  S  R  K  C  *  S  P  Y  V  F  K  S :   V  L  R  C  D  V  T  G  K  V  L  M  K  C  F  L  S  G  M  P  D  L  K  L  G  L  N  D  K  I  G  L  E  K  E  S  Q  L  K  S  R  P  T  K  S :   G  K  T  I  E  L  D  D  V  T  F  H  Q  C  V  N  L  T  R  F  N  S  E  K  T  V  S  F  V  P  P  D  G  E  F  E  L  M  K :   Y  R  I  T  E  G  V  N  L  P  F  R  V  L  P  T  I  K  E  L  G  R  T  R  M  E  V  N  V  K  :  V  K  S  V  F  G  A  K  M  F  A  L  G  V  V  I  K  V  P  V  P  K  Q  T  A  K  A  S  F  Q  V  T  S  G  R  A  K  Y  N  P  S  I  D  S  L  V  W  K :   I  K  K  F  P  G  Q  T  E  S  T  M  S  A  E  V  E  L  I  S  T  I  A  E  K  K  S  W  T  R  P  P  I  Q  M  E  F  Q  :  V  P  M  F  T  A  S  G  L  R  V  R  F  L  K  :  V  W  E  K  S  G  Y  N  T  V  E  W  V  R  Y  I  T  K  A  G  S  Y  E  I  R  C  *  K  I  G  K  L  I  F  F  I  G  S  V  L  W  K  P  K  V  *  G  R  H  F  V  M  Q  E  M  Q  L  M  H  L  V  F  *  G  L  L  N  M  V  C  L  *  Y  I  C  P  V  K  F  I  V  L  L  Y  R  L  V  L  Y  E  D  *  E  E  A  F  V  S  I  L  F  V  Y  L  T  Y  S  P  L  N  Y  F  S  I  E  L  M  K  T  M  G  D  Q  G  V  P  S  T  N  *  E  K  T  </second_frame>
            <third_frame>   I  *  A  V  P  N  W  R  H  F  S  P  I  Y  D  K  S  N  C  S  S  L  R  F  S  F  H  Y  Y  *  R  T  F  R  I  I  *  I  *  L  D  R  S  F  *  I  H  F  G  V  A  A  M  P  V  A  A  S  A  V  Y  F  L  N  L  R  G  D  V  L  I  N  R  L  Y  R  D  D  V  G :   G  N  M  V  D  A  F  R  M  H  I  M  Q  T  K  E  L  G  T  C  P  V  R  Q  I  G  G  C  S  F  F  Y  M  R  I  S  N  V  Y  I  V  I  V  V  S  T  N  A  N  V  A  C  A  F  K  F  V  V  E  :  A  V  A  L  F  K  S  Y  F  G  G  S  F  D  E  D  A  I  R  N  N  F  V  L  I  Y  E  L  L  D   : E  I  M  D  F  G  Y  P  Q  N  L  S  P  E  I  L  K  L  Y  I  T  Q  E  G  V  R  S  P  F  S  S  K  :  Q  P  L  D  K  P  V  P  N  A  T  L  Q  V  T  G  A  V  G  W  R  R  E  G  L  V  Y  K  K  N  E  :  V  F  L  D  I  V  E  S  V  N  L  L  M  S  S  K   : V  C  S  V  V  M  *  L  G  K  F  S  *  N  A  F  F  L  E  C  L  I  *  S  W  G  *  M  I  K  L  V  L  R  K  S  R  S  L  N  P  V  Q  Q  R   : A  E  R  L  L  N  L  M  M  L  L  S  T  N  V  *  T  *  R  D  S  I  Q  K  R  L  S  A  L  Y  H  Q  M  V  N  S  N  *  *   : S  T  A  L  P  K  E  *  I  F  L  S  V  Y  C  Q  Q  S  R  N  *  V  V  R  E  W  K  *  M  L  R :   L  R  V  C  L  V  Q  K  C  L  L  L  E  L  S  L  K  F  Q  C  Q  S  K  L  Q  K  Q  A  S  R  *  H  Q  G  E  Q  S  T  I  H  P  L  T  L  W  C  G   : R  *  K  N  F  L  G  K  L  S  Q  Q  *  V  L  K  W  S  *  F  R  Q  *  Q  R  R  S  P  G  L  G  H  Q  F  R  W  N  S  R :   F  P  C  L  R  H  L  D  F  E  F  A  F  S  R :   Y  G  K  R  A  A  T  T  Q  L  N  G  F  A  I  S  Q  K  L  V  L  M  R  L  G  A  E  K  *  V  S  *  S  F  L  *  D  Q  Y  Y  G  S  P  R  Y  R  G  A  I  L  L  C  R  K  C  N  L  C  I  L  Y  F  E  G  F  *  T  W  F  V  Y  S  I  F  V  P  *  N  S  L  F  C  C  T  G  *  F  F  T  R  T  K  K  R  L  L  F  P  F  Y  L  Y  I  *  H  I  P  P  *  T  I  F  P  L  N  *  *  K  P  W  E  I  K  V  F  L  Q  R  I  K  K  K  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59796" stop="59777"/>
                    <exon start="59702" stop="59568"/>
                    <exon start="57932" stop="57816"/>
                    <exon start="57145" stop="57055"/>
                    <exon start="56953" stop="56811"/>
                    <exon start="54950" stop="54836"/>
                    <exon start="54044" stop="54000"/>
                    <exon start="53925" stop="53845"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>744</number_coding_nucleotides>
                  <number_encoded_amino_acids>248</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SPYVFKSVLRCDVTGKVLMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKELGRTRMEVNVKVKSVFGAKMFALGVVIKVPVPKQTAKASFQVTSGRAKYNPSIDSLVWKIKKFPGQTESTMSAEVELISTIAEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITKAGSYEIRC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66150" stop="65910"/>
                    <exon start="62827" stop="62814"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EFKLSPTGDISLPSTTNLTVLPYVFHFIIIEEPFESFRSDLIEVSRSISVLQPCLWQLQLFTSSISVAMSSSIVYTVTTSGVIW*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53833" stop="53582"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ADLFYRISIMEAQGIGAPFCYAGNATYASCILRAFKHGLSIVYLSREIHCSVVQVSSLRGLRRGFCFHSICIFDIFPLKLFFH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="66150" e_stop="65910"/>
            <exon e_start="62827" e_stop="62650"/>
            <exon e_start="62280" e_stop="62190"/>
            <exon e_start="60329" e_stop="60235"/>
            <exon e_start="60007" e_stop="59915"/>
            <exon e_start="59825" e_stop="59777"/>
            <exon e_start="59706" e_stop="59568"/>
            <exon e_start="57932" e_stop="57816"/>
            <exon e_start="57145" e_stop="57055"/>
            <exon e_start="56953" e_stop="56811"/>
            <exon e_start="54950" e_stop="54836"/>
            <exon e_start="54071" e_stop="54000"/>
            <exon e_start="53925" e_stop="53838"/>
            <exon e_start="53671" e_stop="53590"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.588" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.062" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.825" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.609" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.759" acc_prob="0.987" e_score="1.000"/>
          <exon-only e_score="0.927"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="66150" e_stop="65910" e_length="241"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="65909" i_stop="62828" i_length="3082"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="62827" e_stop="62650" e_length="178"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="62649" i_stop="62281" i_length="369"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="62280" e_stop="62190" e_length="91"/>
          </exon>
          <intron i_serial="3" don_prob="0.986" acc_prob="0.588">
            <gDNA_intron_boundary i_start="62189" i_stop="60330" i_length="1860"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="60329" e_stop="60235" e_length="95"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.000">
            <gDNA_intron_boundary i_start="60234" i_stop="60008" i_length="227"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="60007" e_stop="59915" e_length="93"/>
          </exon>
          <intron i_serial="5" don_prob="0.974" acc_prob="0.993">
            <gDNA_intron_boundary i_start="59914" i_stop="59826" i_length="89"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="59825" e_stop="59777" e_length="49"/>
          </exon>
          <intron i_serial="6" don_prob="0.062" acc_prob="0.000">
            <gDNA_intron_boundary i_start="59776" i_stop="59707" i_length="70"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="59706" e_stop="59568" e_length="139"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.987">
            <gDNA_intron_boundary i_start="59567" i_stop="57933" i_length="1635"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="57932" e_stop="57816" e_length="117"/>
          </exon>
          <intron i_serial="8" don_prob="1.000" acc_prob="0.984">
            <gDNA_intron_boundary i_start="57815" i_stop="57146" i_length="670"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="57145" e_stop="57055" e_length="91"/>
          </exon>
          <intron i_serial="9" don_prob="0.973" acc_prob="0.998">
            <gDNA_intron_boundary i_start="57054" i_stop="56954" i_length="101"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="56953" e_stop="56811" e_length="143"/>
          </exon>
          <intron i_serial="10" don_prob="0.825" acc_prob="0.999">
            <gDNA_intron_boundary i_start="56810" i_stop="54951" i_length="1860"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="54950" e_stop="54836" e_length="115"/>
          </exon>
          <intron i_serial="11" don_prob="0.609" acc_prob="0.993">
            <gDNA_intron_boundary i_start="54835" i_stop="54072" i_length="764"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="54071" e_stop="54000" e_length="72"/>
          </exon>
          <intron i_serial="12" don_prob="0.900" acc_prob="0.994">
            <gDNA_intron_boundary i_start="53999" i_stop="53926" i_length="74"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="53925" e_stop="53838" e_length="88"/>
          </exon>
          <intron i_serial="13" don_prob="0.759" acc_prob="0.987">
            <gDNA_intron_boundary i_start="53837" i_stop="53672" i_length="166"/>
          </intron>
          <exon e_serial="14" e_score="0.927">
            <gDNA_exon_boundary e_start="53671" e_stop="53590" e_length="82"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66150" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301652" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66145" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203306" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66144" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66133" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60267"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313772" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66127" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60235"/>
              <exon start="60007" stop="59915"/>
              <exon start="59825" stop="59777"/>
              <exon start="59706" stop="59629"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701744" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66116" stop="65910"/>
              <exon start="62827" stop="62791"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66079" stop="65910"/>
              <exon start="62827" stop="62659"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66050" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60235"/>
              <exon start="60007" stop="59945"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253193" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66050" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60235"/>
              <exon start="60007" stop="59958"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253021" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62740" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60235"/>
              <exon start="60007" stop="59956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250441" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62709" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60235"/>
              <exon start="60007" stop="59915"/>
              <exon start="59825" stop="59777"/>
              <exon start="59706" stop="59568"/>
              <exon start="57932" stop="57816"/>
              <exon start="57145" stop="57117"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697662" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62683" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60235"/>
              <exon start="60007" stop="59915"/>
              <exon start="59825" stop="59777"/>
              <exon start="59706" stop="59568"/>
              <exon start="57932" stop="57863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250420" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59821" stop="59777"/>
              <exon start="59706" stop="59568"/>
              <exon start="57932" stop="57816"/>
              <exon start="57145" stop="57055"/>
              <exon start="56953" stop="56825"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276498" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59692" stop="59568"/>
              <exon start="57932" stop="57841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269856" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59681" stop="59568"/>
              <exon start="57932" stop="57816"/>
              <exon start="57145" stop="57055"/>
              <exon start="56953" stop="56853"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256914" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59606" stop="59568"/>
              <exon start="57932" stop="57816"/>
              <exon start="57145" stop="57055"/>
              <exon start="56953" stop="56811"/>
              <exon start="54950" stop="54836"/>
              <exon start="54071" stop="54000"/>
              <exon start="53925" stop="53838"/>
              <exon start="53671" stop="53590"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391525" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAATTTAAGCTGTCCCCAACTGGCGACATTTCTCTCCCATCTACGACAAATCTAACTGTTCTTCCCTACGTTTTTCATTTCATTATTATTGAAGAACCTTTCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGG : GGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAG : GCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATG : AAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTCCGCTCACCCTTTTCGTCAAAG : CAGCCTTTGGATAAACCAGTTCCAAACGCCACATTACAAGTCACGGGCGCTGTTGGTTGGCGCAGGGAGGGTCTTGTTTATAAGAAGAATGAG : GTGTTTCTGGATATAGTAGAAAGTGTTAATCTCCTTATGTCTTCAAAAG : GTAGTGTGCTCCGTTGTGATGTAACTGGGAAAGTTCTCATGAAATGCTTTCTTTCTGGAATGCCTGATTTGAAGTTGGGGTTAAATGATAAAATTGGTCTTGAGAAAGAGTCGCAGCTTAAATCCCGTCCAACAAAGAG : CGGAAAGACTATTGAACTTGATGATGTTACTTTCCACCAATGTGTAAACTTAACGAGATTCAATTCAGAAAAGACTGTCAGCTTTGTACCACCAGATGGTGAATTCGAACTGATGAA : GTACCGCATTACCGAAGGAGTAAATCTTCCTTTCCGTGTATTGCCAACAATCAAGGAATTAGGTCGTACGCGAATGGAAGTGAATGTTAAG : GTTAAGAGTGTGTTTGGTGCAAAAATGTTTGCTCTTGGAGTTGTCATTAAAGTTCCAGTGCCAAAGCAAACTGCAAAAGCAAGCTTCCAGGTGACATCAGGGAGAGCAAAGTACAATCCATCCATTGACTCTTTGGTGTGGAA : GATAAAAAAATTTCCTGGGCAAACTGAGTCAACAATGAGTGCTGAAGTGGAGTTGATTTCGACAATAGCAGAGAAGAAGTCCTGGACTAGGCCACCAATTCAGATGGAATTCCAG : CTGCATGACCCACTTTTGTCATTGTAGGTTCCCATGTTTACGGCATCTGGACTTCGAGTTCGCTTTCTCAAG : GTATGGGAAAAGAGCGGCTACAACACAGTTGAATGGGTTCGCTATATCACAAAAGCTGGTTCTTATGAGATTAGGTGCTGAAAAATAG : GTTAGTTCTTTACGAGGACTAAGAAGAGGCTTTTGTTTCCATTCTATTTGTATATTTGACATATTCCCCCTTAAACTATTTT</gDNA_template>
            <first_frame> E  F  K  L  S  P  T  G  D  I  S  L  P  S  T  T  N  L  T  V  L  P  Y  V  F  H  F  I  I  I  E  E  P  F  E  S  F  R  S  D  L  I  E  V  S  R  S  I  S  V  L  Q  P  C  L  W  Q  L  Q  L  F  T  S  S  I  S  V  A  M  S  S  S  I  V  Y  T  V  T  T  S   : G  V  I  W  *  M  P  F  G  C  I  *  C  R  Q  K  N  S  G  H  V  L  S  G  R  L  E  V  A  L  S  S  T  *  E  L  A  M  S  I  L  *  L  *  L  A  P  M  Q  M  S  H  V  H  S  S  L  W  L  R :   L  L  H  Y  S  N  L  I  L  V  V  L  L  T  K  M  P  F  V  I  T  L  S  *  F  T  S  F  W  M  :  K  *  W  T  L  V  T  L  K  I  F  H  L  K  S  *  N  S  I  L  L  R  K  G  S  A  H  P  F  R  Q  S :   S  L  W  I  N  Q  F  Q  T  P  H  Y  K  S  R  A  L  L  V  G  A  G  R  V  L  F  I  R  R  M  R :   C  F  W  I  *  *  K  V  L  I  S  L  C  L  Q  K  :  V  V  C  S  V  V  M  *  L  G  K  F  S  *  N  A  F  F  L  E  C  L  I  *  S  W  G  *  M  I  K  L  V  L  R  K  S  R  S  L  N  P  V  Q  Q  R   : A  E  R  L  L  N  L  M  M  L  L  S  T  N  V  *  T  *  R  D  S  I  Q  K  R  L  S  A  L  Y  H  Q  M  V  N  S  N  *  *   : S  T  A  L  P  K  E  *  I  F  L  S  V  Y  C  Q  Q  S  R  N  *  V  V  R  E  W  K  *  M  L  R :   L  R  V  C  L  V  Q  K  C  L  L  L  E  L  S  L  K  F  Q  C  Q  S  K  L  Q  K  Q  A  S  R  *  H  Q  G  E  Q  S  T  I  H  P  L  T  L  W  C  G   : R  *  K  N  F  L  G  K  L  S  Q  Q  *  V  L  K  W  S  *  F  R  Q  *  Q  R  R  S  P  G  L  G  H  Q  F  R  W  N  S  S :   C  M  T  H  F  C  H  C  R  F  P  C  L  R  H  L  D  F  E  F  A  F  S  R :   Y  G  K  R  A  A  T  T  Q  L  N  G  F  A  I  S  Q  K  L  V  L  M  R  L  G  A  E  K  *  :  V  S  S  L  R  G  L  R  R  G  F  C  F  H  S  I  C  I  F  D  I  F  P  L  K  L  F  </first_frame>
            <second_frame>  N  L  S  C  P  Q  L  A  T  F  L  S  H  L  R  Q  I  *  L  F  F  P  T  F  F  I  S  L  L  L  K  N  L  S  N  H  L  D  L  T  *  S  K  F  L  D  P  F  R  C  C  S  H  A  C  G  S  F  S  C  L  L  P  Q  S  P  W  R  C  P  H  Q  S  S  I  P  *  R  R  R  :  G  *  Y  G  R  C  L  S  D  A  Y  N  A  D  K  R  T  R  D  M  S  C  Q  A  D  W  R  L  L  F  L  L  H  E  N  *  Q  C  L  Y  C  D  C  S  *  H  Q  C  K  C  R  M  C  I  Q  V  C  G  *   : G  C  C  T  I  Q  I  L  F  W  W  F  F  *  R  R  C  H  S  *  *  L  C  P  N  L  R  A  F  G  * :   N  N  G  L  W  L  P  S  K  S  F  T  *  N  L  E  T  L  Y  Y  S  G  R  G  P  L  T  L  F  V  K   : A  A  F  G  *  T  S  S  K  R  H  I  T  S  H  G  R  C  W  L  A  Q  G  G  S  C  L  *  E  E  *   : G  V  S  G  Y  S  R  K  C  *  S  P  Y  V  F  K  R :   *  C  A  P  L  *  C  N  W  E  S  S  H  E  M  L  S  F  W  N  A  *  F  E  V  G  V  K  *  *  N  W  S  *  E  R  V  A  A  *  I  P  S  N  K  E  :  R  K  D  Y  *  T  *  *  C  Y  F  P  P  M  C  K  L  N  E  I  Q  F  R  K  D  C  Q  L  C  T  T  R  W  *  I  R  T  D  E  :  V  P  H  Y  R  R  S  K  S  S  F  P  C  I  A  N  N  Q  G  I  R  S  Y  A  N  G  S  E  C  *   : G  *  E  C  V  W  C  K  N  V  C  S  W  S  C  H  *  S  S  S  A  K  A  N  C  K  S  K  L  P  G  D  I  R  E  S  K  V  Q  S  I  H  *  L  F  G  V  E  :  D  K  K  I  S  W  A  N  *  V  N  N  E  C  *  S  G  V  D  F  D  N  S  R  E  E  V  L  D  *  A  T  N  S  D  G  I  P   : A  A  *  P  T  F  V  I  V  G  S  H  V  Y  G  I  W  T  S  S  S  L  S  Q   : G  M  G  K  E  R  L  Q  H  S  *  M  G  S  L  Y  H  K  S  W  F  L  *  D  *  V  L  K  N  R :   L  V  L  Y  E  D  *  E  E  A  F  V  S  I  L  F  V  Y  L  T  Y  S  P  L  N  Y  F </second_frame>
            <third_frame>   I  *  A  V  P  N  W  R  H  F  S  P  I  Y  D  K  S  N  C  S  S  L  R  F  S  F  H  Y  Y  *  R  T  F  R  I  I  *  I  *  L  D  R  S  F  *  I  H  F  G  V  A  A  M  P  V  A  A  S  A  V  Y  F  L  N  L  R  G  D  V  L  I  N  R  L  Y  R  D  D  V  G :   G  N  M  V  D  A  F  R  M  H  I  M  Q  T  K  E  L  G  T  C  P  V  R  Q  I  G  G  C  S  F  F  Y  M  R  I  S  N  V  Y  I  V  I  V  V  S  T  N  A  N  V  A  C  A  F  K  F  V  V  E  :  A  V  A  L  F  K  S  Y  F  G  G  S  F  D  E  D  A  I  R  N  N  F  V  L  I  Y  E  L  L  D   : E  I  M  D  F  G  Y  P  Q  N  L  S  P  E  I  L  K  L  Y  I  T  Q  E  G  V  R  S  P  F  S  S  K  :  Q  P  L  D  K  P  V  P  N  A  T  L  Q  V  T  G  A  V  G  W  R  R  E  G  L  V  Y  K  K  N  E  :  V  F  L  D  I  V  E  S  V  N  L  L  M  S  S  K   : G  S  V  L  R  C  D  V  T  G  K  V  L  M  K  C  F  L  S  G  M  P  D  L  K  L  G  L  N  D  K  I  G  L  E  K  E  S  Q  L  K  S  R  P  T  K  S :   G  K  T  I  E  L  D  D  V  T  F  H  Q  C  V  N  L  T  R  F  N  S  E  K  T  V  S  F  V  P  P  D  G  E  F  E  L  M  K :   Y  R  I  T  E  G  V  N  L  P  F  R  V  L  P  T  I  K  E  L  G  R  T  R  M  E  V  N  V  K  :  V  K  S  V  F  G  A  K  M  F  A  L  G  V  V  I  K  V  P  V  P  K  Q  T  A  K  A  S  F  Q  V  T  S  G  R  A  K  Y  N  P  S  I  D  S  L  V  W  K :   I  K  K  F  P  G  Q  T  E  S  T  M  S  A  E  V  E  L  I  S  T  I  A  E  K  K  S  W  T  R  P  P  I  Q  M  E  F  Q  :  L  H  D  P  L  L  S  L  *  V  P  M  F  T  A  S  G  L  R  V  R  F  L  K  :  V  W  E  K  S  G  Y  N  T  V  E  W  V  R  Y  I  T  K  A  G  S  Y  E  I  R  C  *  K  I   : G  *  F  F  T  R  T  K  K  R  L  L  F  P  F  Y  L  Y  I  *  H  I  P  P  *  T  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66013" stop="65910"/>
                    <exon start="62827" stop="62650"/>
                    <exon start="62280" stop="62190"/>
                    <exon start="60329" stop="60235"/>
                    <exon start="60007" stop="59915"/>
                    <exon start="59825" stop="59777"/>
                    <exon start="59706" stop="59568"/>
                    <exon start="57932" stop="57816"/>
                    <exon start="57145" stop="57055"/>
                    <exon start="56953" stop="56811"/>
                    <exon start="54950" stop="54836"/>
                    <exon start="54071" stop="54045"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1239</number_coding_nucleotides>
                  <number_encoded_amino_acids>413</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IHFGVAAMPVAASAVYFLNLRGDVLINRLYRDDVGGNMVDAFRMHIMQTKELGTCPVRQIGGCSFFYMRISNVYIVIVVSTNANVACAFKFVVEAVALFKSYFGGSFDEDAIRNNFVLIYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKQPLDKPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKVLMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKELGRTRMEVNVKVKSVFGAKMFALGVVIKVPVPKQTAKASFQVTSGRAKYNPSIDSLVWKIKKFPGQTESTMSAEVELISTIAEKKSWTRPPIQMEFQLHDPLLSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="66150" e_stop="65910"/>
            <exon e_start="62827" e_stop="62650"/>
            <exon e_start="62280" e_stop="62190"/>
            <exon e_start="60329" e_stop="60235"/>
            <exon e_start="59825" e_stop="59777"/>
            <exon e_start="59706" e_stop="59568"/>
            <exon e_start="57932" e_stop="57816"/>
            <exon e_start="57145" e_stop="57055"/>
            <exon e_start="56953" e_stop="56811"/>
            <exon e_start="54950" e_stop="54836"/>
            <exon e_start="54044" e_stop="54000"/>
            <exon e_start="53925" e_stop="53526"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.588" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.062" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.825" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.609" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="66150" e_stop="65910" e_length="241"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="65909" i_stop="62828" i_length="3082"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="62827" e_stop="62650" e_length="178"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="62649" i_stop="62281" i_length="369"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="62280" e_stop="62190" e_length="91"/>
          </exon>
          <intron i_serial="3" don_prob="0.986" acc_prob="0.588">
            <gDNA_intron_boundary i_start="62189" i_stop="60330" i_length="1860"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="60329" e_stop="60235" e_length="95"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.993">
            <gDNA_intron_boundary i_start="60234" i_stop="59826" i_length="409"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="59825" e_stop="59777" e_length="49"/>
          </exon>
          <intron i_serial="5" don_prob="0.062" acc_prob="0.000">
            <gDNA_intron_boundary i_start="59776" i_stop="59707" i_length="70"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="59706" e_stop="59568" e_length="139"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.987">
            <gDNA_intron_boundary i_start="59567" i_stop="57933" i_length="1635"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="57932" e_stop="57816" e_length="117"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.984">
            <gDNA_intron_boundary i_start="57815" i_stop="57146" i_length="670"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="57145" e_stop="57055" e_length="91"/>
          </exon>
          <intron i_serial="8" don_prob="0.973" acc_prob="0.998">
            <gDNA_intron_boundary i_start="57054" i_stop="56954" i_length="101"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="56953" e_stop="56811" e_length="143"/>
          </exon>
          <intron i_serial="9" don_prob="0.825" acc_prob="0.999">
            <gDNA_intron_boundary i_start="56810" i_stop="54951" i_length="1860"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="54950" e_stop="54836" e_length="115"/>
          </exon>
          <intron i_serial="10" don_prob="0.609" acc_prob="0.973">
            <gDNA_intron_boundary i_start="54835" i_stop="54045" i_length="791"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="54044" e_stop="54000" e_length="45"/>
          </exon>
          <intron i_serial="11" don_prob="0.900" acc_prob="0.994">
            <gDNA_intron_boundary i_start="53999" i_stop="53926" i_length="74"/>
          </intron>
          <exon e_serial="12" e_score="0.993">
            <gDNA_exon_boundary e_start="53925" e_stop="53526" e_length="400"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66150" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301652" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66145" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203306" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66144" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66133" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60267"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313772" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66116" stop="65910"/>
              <exon start="62827" stop="62791"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66079" stop="65910"/>
              <exon start="62827" stop="62659"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469582" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62716" stop="62650"/>
              <exon start="62280" stop="62190"/>
              <exon start="60329" stop="60235"/>
              <exon start="59825" stop="59777"/>
              <exon start="59706" stop="59568"/>
              <exon start="57932" stop="57816"/>
              <exon start="57145" stop="57055"/>
              <exon start="56953" stop="56866"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212247" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59821" stop="59777"/>
              <exon start="59706" stop="59568"/>
              <exon start="57932" stop="57816"/>
              <exon start="57145" stop="57055"/>
              <exon start="56953" stop="56825"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276498" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59692" stop="59568"/>
              <exon start="57932" stop="57841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269856" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59681" stop="59568"/>
              <exon start="57932" stop="57816"/>
              <exon start="57145" stop="57055"/>
              <exon start="56953" stop="56853"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256914" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57873" stop="57816"/>
              <exon start="57145" stop="57055"/>
              <exon start="56953" stop="56811"/>
              <exon start="54950" stop="54836"/>
              <exon start="54044" stop="54000"/>
              <exon start="53925" stop="53717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213270" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57109" stop="57055"/>
              <exon start="56953" stop="56811"/>
              <exon start="54950" stop="54836"/>
              <exon start="54044" stop="54000"/>
              <exon start="53925" stop="53717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206328" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54932" stop="54836"/>
              <exon start="54044" stop="54000"/>
              <exon start="53925" stop="53526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203307" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54881" stop="54836"/>
              <exon start="54044" stop="54000"/>
              <exon start="53925" stop="53561"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228601" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54873" stop="54836"/>
              <exon start="54044" stop="54000"/>
              <exon start="53925" stop="53561"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229273" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAATTTAAGCTGTCCCCAACTGGCGACATTTCTCTCCCATCTACGACAAATCTAACTGTTCTTCCCTACGTTTTTCATTTCATTATTATTGAAGAACCTTTCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGG : GGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAG : GCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATG : AAATAATGGACTTTGGTTACCCTCAAAATCTTTCACCTGAAATCTTGAAACTCTATATTACTCAGGAAGGGGTCCGCTCACCCTTTTCGTCAAAG : GTGTTTCTGGATATAGTAGAAAGTGTTAATCTCCTTATGTCTTCAAAAG : GTAGTGTGCTCCGTTGTGATGTAACTGGGAAAGTTCTCATGAAATGCTTTCTTTCTGGAATGCCTGATTTGAAGTTGGGGTTAAATGATAAAATTGGTCTTGAGAAAGAGTCGCAGCTTAAATCCCGTCCAACAAAGAG : CGGAAAGACTATTGAACTTGATGATGTTACTTTCCACCAATGTGTAAACTTAACGAGATTCAATTCAGAAAAGACTGTCAGCTTTGTACCACCAGATGGTGAATTCGAACTGATGAA : GTACCGCATTACCGAAGGAGTAAATCTTCCTTTCCGTGTATTGCCAACAATCAAGGAATTAGGTCGTACGCGAATGGAAGTGAATGTTAAG : GTTAAGAGTGTGTTTGGTGCAAAAATGTTTGCTCTTGGAGTTGTCATTAAAGTTCCAGTGCCAAAGCAAACTGCAAAAGCAAGCTTCCAGGTGACATCAGGGAGAGCAAAGTACAATCCATCCATTGACTCTTTGGTGTGGAA : GATAAAAAAATTTCCTGGGCAAACTGAGTCAACAATGAGTGCTGAAGTGGAGTTGATTTCGACAATAGCAGAGAAGAAGTCCTGGACTAGGCCACCAATTCAGATGGAATTCCAG : GTTCCCATGTTTACGGCATCTGGACTTCGAGTTCGCTTTCTCAAG : GTATGGGAAAAGAGCGGCTACAACACAGTTGAATGGGTTCGCTATATCACAAAAGCTGGTTCTTATGAGATTAGGTGCTGAAAAATAGGTAAGCTGATCTTTTTTATAGGATCAGTATTATGGAAGCCCAAGGTATAGGGGCGCCATTTTGTTATGCAGGAAATGCAACTTATGCATCTTGTATTTTGAGGGCTTTTAAACATGGTTTGTCTATAGTATATTTGTCCCGTGAAATTCATTGTTCTGTTGTACAGGTTAGTTCTTTACGAGGACTAAGAAGAGGCTTTTGTTTCCATTCTATTTGTATATTTGACATATTCCCCCTTAAACTATTTTTCCATTGAACTAATGAAAACCATGGGAGATCAAGGTGTTCCTTCAACGAATTAAGAAAAAACCC</gDNA_template>
            <first_frame> E  F  K  L  S  P  T  G  D  I  S  L  P  S  T  T  N  L  T  V  L  P  Y  V  F  H  F  I  I  I  E  E  P  F  E  S  F  R  S  D  L  I  E  V  S  R  S  I  S  V  L  Q  P  C  L  W  Q  L  Q  L  F  T  S  S  I  S  V  A  M  S  S  S  I  V  Y  T  V  T  T  S   : G  V  I  W  *  M  P  F  G  C  I  *  C  R  Q  K  N  S  G  H  V  L  S  G  R  L  E  V  A  L  S  S  T  *  E  L  A  M  S  I  L  *  L  *  L  A  P  M  Q  M  S  H  V  H  S  S  L  W  L  R :   L  L  H  Y  S  N  L  I  L  V  V  L  L  T  K  M  P  F  V  I  T  L  S  *  F  T  S  F  W  M  :  K  *  W  T  L  V  T  L  K  I  F  H  L  K  S  *  N  S  I  L  L  R  K  G  S  A  H  P  F  R  Q  R :   C  F  W  I  *  *  K  V  L  I  S  L  C  L  Q  K  :  V  V  C  S  V  V  M  *  L  G  K  F  S  *  N  A  F  F  L  E  C  L  I  *  S  W  G  *  M  I  K  L  V  L  R  K  S  R  S  L  N  P  V  Q  Q  R   : A  E  R  L  L  N  L  M  M  L  L  S  T  N  V  *  T  *  R  D  S  I  Q  K  R  L  S  A  L  Y  H  Q  M  V  N  S  N  *  *   : S  T  A  L  P  K  E  *  I  F  L  S  V  Y  C  Q  Q  S  R  N  *  V  V  R  E  W  K  *  M  L  R :   L  R  V  C  L  V  Q  K  C  L  L  L  E  L  S  L  K  F  Q  C  Q  S  K  L  Q  K  Q  A  S  R  *  H  Q  G  E  Q  S  T  I  H  P  L  T  L  W  C  G   : R  *  K  N  F  L  G  K  L  S  Q  Q  *  V  L  K  W  S  *  F  R  Q  *  Q  R  R  S  P  G  L  G  H  Q  F  R  W  N  S  R :   F  P  C  L  R  H  L  D  F  E  F  A  F  S  R :   Y  G  K  R  A  A  T  T  Q  L  N  G  F  A  I  S  Q  K  L  V  L  M  R  L  G  A  E  K  *  V  S  *  S  F  L  *  D  Q  Y  Y  G  S  P  R  Y  R  G  A  I  L  L  C  R  K  C  N  L  C  I  L  Y  F  E  G  F  *  T  W  F  V  Y  S  I  F  V  P  *  N  S  L  F  C  C  T  G  *  F  F  T  R  T  K  K  R  L  L  F  P  F  Y  L  Y  I  *  H  I  P  P  *  T  I  F  P  L  N  *  *  K  P  W  E  I  K  V  F  L  Q  R  I  K  K  K  P </first_frame>
            <second_frame>  N  L  S  C  P  Q  L  A  T  F  L  S  H  L  R  Q  I  *  L  F  F  P  T  F  F  I  S  L  L  L  K  N  L  S  N  H  L  D  L  T  *  S  K  F  L  D  P  F  R  C  C  S  H  A  C  G  S  F  S  C  L  L  P  Q  S  P  W  R  C  P  H  Q  S  S  I  P  *  R  R  R  :  G  *  Y  G  R  C  L  S  D  A  Y  N  A  D  K  R  T  R  D  M  S  C  Q  A  D  W  R  L  L  F  L  L  H  E  N  *  Q  C  L  Y  C  D  C  S  *  H  Q  C  K  C  R  M  C  I  Q  V  C  G  *   : G  C  C  T  I  Q  I  L  F  W  W  F  F  *  R  R  C  H  S  *  *  L  C  P  N  L  R  A  F  G  * :   N  N  G  L  W  L  P  S  K  S  F  T  *  N  L  E  T  L  Y  Y  S  G  R  G  P  L  T  L  F  V  K   : G  V  S  G  Y  S  R  K  C  *  S  P  Y  V  F  K  R :   *  C  A  P  L  *  C  N  W  E  S  S  H  E  M  L  S  F  W  N  A  *  F  E  V  G  V  K  *  *  N  W  S  *  E  R  V  A  A  *  I  P  S  N  K  E  :  R  K  D  Y  *  T  *  *  C  Y  F  P  P  M  C  K  L  N  E  I  Q  F  R  K  D  C  Q  L  C  T  T  R  W  *  I  R  T  D  E  :  V  P  H  Y  R  R  S  K  S  S  F  P  C  I  A  N  N  Q  G  I  R  S  Y  A  N  G  S  E  C  *   : G  *  E  C  V  W  C  K  N  V  C  S  W  S  C  H  *  S  S  S  A  K  A  N  C  K  S  K  L  P  G  D  I  R  E  S  K  V  Q  S  I  H  *  L  F  G  V  E  :  D  K  K  I  S  W  A  N  *  V  N  N  E  C  *  S  G  V  D  F  D  N  S  R  E  E  V  L  D  *  A  T  N  S  D  G  I  P   : G  S  H  V  Y  G  I  W  T  S  S  S  L  S  Q   : G  M  G  K  E  R  L  Q  H  S  *  M  G  S  L  Y  H  K  S  W  F  L  *  D  *  V  L  K  N  R  *  A  D  L  F  Y  R  I  S  I  M  E  A  Q  G  I  G  A  P  F  C  Y  A  G  N  A  T  Y  A  S  C  I  L  R  A  F  K  H  G  L  S  I  V  Y  L  S  R  E  I  H  C  S  V  V  Q  V  S  S  L  R  G  L  R  R  G  F  C  F  H  S  I  C  I  F  D  I  F  P  L  K  L  F  F  H  *  T  N  E  N  H  G  R  S  R  C  S  F  N  E  L  R  K  N   </second_frame>
            <third_frame>   I  *  A  V  P  N  W  R  H  F  S  P  I  Y  D  K  S  N  C  S  S  L  R  F  S  F  H  Y  Y  *  R  T  F  R  I  I  *  I  *  L  D  R  S  F  *  I  H  F  G  V  A  A  M  P  V  A  A  S  A  V  Y  F  L  N  L  R  G  D  V  L  I  N  R  L  Y  R  D  D  V  G :   G  N  M  V  D  A  F  R  M  H  I  M  Q  T  K  E  L  G  T  C  P  V  R  Q  I  G  G  C  S  F  F  Y  M  R  I  S  N  V  Y  I  V  I  V  V  S  T  N  A  N  V  A  C  A  F  K  F  V  V  E  :  A  V  A  L  F  K  S  Y  F  G  G  S  F  D  E  D  A  I  R  N  N  F  V  L  I  Y  E  L  L  D   : E  I  M  D  F  G  Y  P  Q  N  L  S  P  E  I  L  K  L  Y  I  T  Q  E  G  V  R  S  P  F  S  S  K  :  V  F  L  D  I  V  E  S  V  N  L  L  M  S  S  K   : G  S  V  L  R  C  D  V  T  G  K  V  L  M  K  C  F  L  S  G  M  P  D  L  K  L  G  L  N  D  K  I  G  L  E  K  E  S  Q  L  K  S  R  P  T  K  S :   G  K  T  I  E  L  D  D  V  T  F  H  Q  C  V  N  L  T  R  F  N  S  E  K  T  V  S  F  V  P  P  D  G  E  F  E  L  M  K :   Y  R  I  T  E  G  V  N  L  P  F  R  V  L  P  T  I  K  E  L  G  R  T  R  M  E  V  N  V  K  :  V  K  S  V  F  G  A  K  M  F  A  L  G  V  V  I  K  V  P  V  P  K  Q  T  A  K  A  S  F  Q  V  T  S  G  R  A  K  Y  N  P  S  I  D  S  L  V  W  K :   I  K  K  F  P  G  Q  T  E  S  T  M  S  A  E  V  E  L  I  S  T  I  A  E  K  K  S  W  T  R  P  P  I  Q  M  E  F  Q  :  V  P  M  F  T  A  S  G  L  R  V  R  F  L  K  :  V  W  E  K  S  G  Y  N  T  V  E  W  V  R  Y  I  T  K  A  G  S  Y  E  I  R  C  *  K  I  G  K  L  I  F  F  I  G  S  V  L  W  K  P  K  V  *  G  R  H  F  V  M  Q  E  M  Q  L  M  H  L  V  F  *  G  L  L  N  M  V  C  L  *  Y  I  C  P  V  K  F  I  V  L  L  Y  R  L  V  L  Y  E  D  *  E  E  A  F  V  S  I  L  F  V  Y  L  T  Y  S  P  L  N  Y  F  S  I  E  L  M  K  T  M  G  D  Q  G  V  P  S  T  N  *  E  K  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66013" stop="65910"/>
                    <exon start="62827" stop="62650"/>
                    <exon start="62280" stop="62190"/>
                    <exon start="60329" stop="60235"/>
                    <exon start="59825" stop="59777"/>
                    <exon start="59706" stop="59568"/>
                    <exon start="57932" stop="57816"/>
                    <exon start="57145" stop="57055"/>
                    <exon start="56953" stop="56811"/>
                    <exon start="54950" stop="54836"/>
                    <exon start="54044" stop="54000"/>
                    <exon start="53925" stop="53845"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1245</number_coding_nucleotides>
                  <number_encoded_amino_acids>415</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IHFGVAAMPVAASAVYFLNLRGDVLINRLYRDDVGGNMVDAFRMHIMQTKELGTCPVRQIGGCSFFYMRISNVYIVIVVSTNANVACAFKFVVEAVALFKSYFGGSFDEDAIRNNFVLIYELLDEIMDFGYPQNLSPEILKLYITQEGVRSPFSSKVFLDIVESVNLLMSSKGSVLRCDVTGKVLMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKELGRTRMEVNVKVKSVFGAKMFALGVVIKVPVPKQTAKASFQVTSGRAKYNPSIDSLVWKIKKFPGQTESTMSAEVELISTIAEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITKAGSYEIRC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53833" stop="53582"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ADLFYRISIMEAQGIGAPFCYAGNATYASCILRAFKHGLSIVYLSREIHCSVVQVSSLRGLRRGFCFHSICIFDIFPLKLFFH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="71321" e_stop="71285"/>
            <exon e_start="70912" e_stop="70797"/>
            <exon e_start="70527" e_stop="70503"/>
            <exon e_start="70115" e_stop="70069"/>
            <exon e_start="69607" e_stop="69599"/>
            <exon e_start="69278" e_stop="69233"/>
            <exon e_start="68134" e_stop="68127"/>
            <exon e_start="67919" e_stop="67896"/>
            <exon e_start="67585" e_stop="67567"/>
            <exon e_start="66914" e_stop="66875"/>
            <exon e_start="66823" e_stop="66781"/>
            <exon e_start="66515" e_stop="66390"/>
            <exon e_start="66020" e_stop="65910"/>
            <exon e_start="62827" e_stop="62650"/>
            <exon e_start="62280" e_stop="62226"/>
            <exon e_start="60264" e_stop="60235"/>
            <exon e_start="60007" e_stop="59915"/>
            <exon e_start="59825" e_stop="59777"/>
            <exon e_start="59706" e_stop="59568"/>
            <exon e_start="57932" e_stop="57816"/>
            <exon e_start="57145" e_stop="57055"/>
            <exon e_start="56953" e_stop="56811"/>
            <exon e_start="54950" e_stop="54836"/>
            <exon e_start="54071" e_stop="54000"/>
            <exon e_start="53925" e_stop="53838"/>
            <exon e_start="53671" e_stop="53590"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.676"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.595"/>
          <exon-intron don_prob="0.342" acc_prob="0.670" e_score="0.560"/>
          <exon-intron don_prob="0.000" acc_prob="0.954" e_score="0.596"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.778"/>
          <exon-intron don_prob="0.922" acc_prob="0.668" e_score="0.652"/>
          <exon-intron don_prob="0.000" acc_prob="0.733" e_score="0.625"/>
          <exon-intron don_prob="0.000" acc_prob="0.926" e_score="0.750"/>
          <exon-intron don_prob="0.000" acc_prob="0.782" e_score="0.737"/>
          <exon-intron don_prob="0.653" acc_prob="0.000" e_score="0.575"/>
          <exon-intron don_prob="0.000" acc_prob="0.119" e_score="0.512"/>
          <exon-intron don_prob="0.991" acc_prob="0.870" e_score="0.492"/>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="0.973"/>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.399" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.062" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.825" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.609" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.759" acc_prob="0.987" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.676">
            <gDNA_exon_boundary e_start="71321" e_stop="71285" e_length="37"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="71284" i_stop="70913" i_length="372"/>
          </intron>
          <exon e_serial="2" e_score="0.595">
            <gDNA_exon_boundary e_start="70912" e_stop="70797" e_length="116"/>
          </exon>
          <intron i_serial="2" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="70796" i_stop="70528" i_length="269"/>
          </intron>
          <exon e_serial="3" e_score="0.560">
            <gDNA_exon_boundary e_start="70527" e_stop="70503" e_length="25"/>
          </exon>
          <intron i_serial="3" don_prob="0.342" acc_prob="0.670">
            <gDNA_intron_boundary i_start="70502" i_stop="70116" i_length="387"/>
          </intron>
          <exon e_serial="4" e_score="0.596">
            <gDNA_exon_boundary e_start="70115" e_stop="70069" e_length="47"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.954">
            <gDNA_intron_boundary i_start="70068" i_stop="69608" i_length="461"/>
          </intron>
          <exon e_serial="5" e_score="0.778">
            <gDNA_exon_boundary e_start="69607" e_stop="69599" e_length="9"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="69598" i_stop="69279" i_length="320"/>
          </intron>
          <exon e_serial="6" e_score="0.652">
            <gDNA_exon_boundary e_start="69278" e_stop="69233" e_length="46"/>
          </exon>
          <intron i_serial="6" don_prob="0.922" acc_prob="0.668">
            <gDNA_intron_boundary i_start="69232" i_stop="68135" i_length="1098"/>
          </intron>
          <exon e_serial="7" e_score="0.625">
            <gDNA_exon_boundary e_start="68134" e_stop="68127" e_length="8"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.733">
            <gDNA_intron_boundary i_start="68126" i_stop="67920" i_length="207"/>
          </intron>
          <exon e_serial="8" e_score="0.750">
            <gDNA_exon_boundary e_start="67919" e_stop="67896" e_length="24"/>
          </exon>
          <intron i_serial="8" don_prob="0.000" acc_prob="0.926">
            <gDNA_intron_boundary i_start="67895" i_stop="67586" i_length="310"/>
          </intron>
          <exon e_serial="9" e_score="0.737">
            <gDNA_exon_boundary e_start="67585" e_stop="67567" e_length="19"/>
          </exon>
          <intron i_serial="9" don_prob="0.000" acc_prob="0.782">
            <gDNA_intron_boundary i_start="67566" i_stop="66915" i_length="652"/>
          </intron>
          <exon e_serial="10" e_score="0.575">
            <gDNA_exon_boundary e_start="66914" e_stop="66875" e_length="40"/>
          </exon>
          <intron i_serial="10" don_prob="0.653" acc_prob="0.000">
            <gDNA_intron_boundary i_start="66874" i_stop="66824" i_length="51"/>
          </intron>
          <exon e_serial="11" e_score="0.512">
            <gDNA_exon_boundary e_start="66823" e_stop="66781" e_length="43"/>
          </exon>
          <intron i_serial="11" don_prob="0.000" acc_prob="0.119">
            <gDNA_intron_boundary i_start="66780" i_stop="66516" i_length="265"/>
          </intron>
          <exon e_serial="12" e_score="0.492">
            <gDNA_exon_boundary e_start="66515" e_stop="66390" e_length="126"/>
          </exon>
          <intron i_serial="12" don_prob="0.991" acc_prob="0.870">
            <gDNA_intron_boundary i_start="66389" i_stop="66021" i_length="369"/>
          </intron>
          <exon e_serial="13" e_score="0.973">
            <gDNA_exon_boundary e_start="66020" e_stop="65910" e_length="111"/>
          </exon>
          <intron i_serial="13" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="65909" i_stop="62828" i_length="3082"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="62827" e_stop="62650" e_length="178"/>
          </exon>
          <intron i_serial="14" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="62649" i_stop="62281" i_length="369"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="62280" e_stop="62226" e_length="55"/>
          </exon>
          <intron i_serial="15" don_prob="0.000" acc_prob="0.399">
            <gDNA_intron_boundary i_start="62225" i_stop="60265" i_length="1961"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="60264" e_stop="60235" e_length="30"/>
          </exon>
          <intron i_serial="16" don_prob="0.998" acc_prob="0.000">
            <gDNA_intron_boundary i_start="60234" i_stop="60008" i_length="227"/>
          </intron>
          <exon e_serial="17" e_score="1.000">
            <gDNA_exon_boundary e_start="60007" e_stop="59915" e_length="93"/>
          </exon>
          <intron i_serial="17" don_prob="0.974" acc_prob="0.993">
            <gDNA_intron_boundary i_start="59914" i_stop="59826" i_length="89"/>
          </intron>
          <exon e_serial="18" e_score="1.000">
            <gDNA_exon_boundary e_start="59825" e_stop="59777" e_length="49"/>
          </exon>
          <intron i_serial="18" don_prob="0.062" acc_prob="0.000">
            <gDNA_intron_boundary i_start="59776" i_stop="59707" i_length="70"/>
          </intron>
          <exon e_serial="19" e_score="1.000">
            <gDNA_exon_boundary e_start="59706" e_stop="59568" e_length="139"/>
          </exon>
          <intron i_serial="19" don_prob="0.999" acc_prob="0.987">
            <gDNA_intron_boundary i_start="59567" i_stop="57933" i_length="1635"/>
          </intron>
          <exon e_serial="20" e_score="1.000">
            <gDNA_exon_boundary e_start="57932" e_stop="57816" e_length="117"/>
          </exon>
          <intron i_serial="20" don_prob="1.000" acc_prob="0.984">
            <gDNA_intron_boundary i_start="57815" i_stop="57146" i_length="670"/>
          </intron>
          <exon e_serial="21" e_score="1.000">
            <gDNA_exon_boundary e_start="57145" e_stop="57055" e_length="91"/>
          </exon>
          <intron i_serial="21" don_prob="0.973" acc_prob="0.998">
            <gDNA_intron_boundary i_start="57054" i_stop="56954" i_length="101"/>
          </intron>
          <exon e_serial="22" e_score="1.000">
            <gDNA_exon_boundary e_start="56953" e_stop="56811" e_length="143"/>
          </exon>
          <intron i_serial="22" don_prob="0.825" acc_prob="0.999">
            <gDNA_intron_boundary i_start="56810" i_stop="54951" i_length="1860"/>
          </intron>
          <exon e_serial="23" e_score="1.000">
            <gDNA_exon_boundary e_start="54950" e_stop="54836" e_length="115"/>
          </exon>
          <intron i_serial="23" don_prob="0.609" acc_prob="0.993">
            <gDNA_intron_boundary i_start="54835" i_stop="54072" i_length="764"/>
          </intron>
          <exon e_serial="24" e_score="1.000">
            <gDNA_exon_boundary e_start="54071" e_stop="54000" e_length="72"/>
          </exon>
          <intron i_serial="24" don_prob="0.900" acc_prob="0.994">
            <gDNA_intron_boundary i_start="53999" i_stop="53926" i_length="74"/>
          </intron>
          <exon e_serial="25" e_score="1.000">
            <gDNA_exon_boundary e_start="53925" e_stop="53838" e_length="88"/>
          </exon>
          <intron i_serial="25" don_prob="0.759" acc_prob="0.987">
            <gDNA_intron_boundary i_start="53837" i_stop="53672" i_length="166"/>
          </intron>
          <exon e_serial="26" e_score="1.000">
            <gDNA_exon_boundary e_start="53671" e_stop="53590" e_length="82"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71321" stop="71285"/>
              <exon start="70912" stop="70797"/>
              <exon start="70527" stop="70503"/>
              <exon start="70115" stop="70069"/>
              <exon start="69607" stop="69599"/>
              <exon start="69278" stop="69233"/>
              <exon start="68134" stop="68127"/>
              <exon start="67919" stop="67896"/>
              <exon start="67585" stop="67567"/>
              <exon start="66914" stop="66875"/>
              <exon start="66823" stop="66781"/>
              <exon start="66515" stop="66390"/>
              <exon start="66020" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62226"/>
              <exon start="60264" stop="60235"/>
              <exon start="60007" stop="59915"/>
              <exon start="59825" stop="59777"/>
              <exon start="59706" stop="59568"/>
              <exon start="57932" stop="57816"/>
              <exon start="57145" stop="57055"/>
              <exon start="56953" stop="56811"/>
              <exon start="54950" stop="54836"/>
              <exon start="54071" stop="54000"/>
              <exon start="53925" stop="53838"/>
              <exon start="53671" stop="53597"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746558" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59821" stop="59777"/>
              <exon start="59706" stop="59568"/>
              <exon start="57932" stop="57816"/>
              <exon start="57145" stop="57055"/>
              <exon start="56953" stop="56825"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276498" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59692" stop="59568"/>
              <exon start="57932" stop="57841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269856" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59681" stop="59568"/>
              <exon start="57932" stop="57816"/>
              <exon start="57145" stop="57055"/>
              <exon start="56953" stop="56853"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256914" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59606" stop="59568"/>
              <exon start="57932" stop="57816"/>
              <exon start="57145" stop="57055"/>
              <exon start="56953" stop="56811"/>
              <exon start="54950" stop="54836"/>
              <exon start="54071" stop="54000"/>
              <exon start="53925" stop="53838"/>
              <exon start="53671" stop="53590"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391525" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGCAAATTTCAGAAAAGTCTCAACACACAAGACAACT : CTCACCATAATCATTTCTTATAAATAACATTTCAGAATATAACAACCTGAAGTAACTGTTTCCAAATTAACACGAGGATAAGTTCCACAGAGGAAAAATGTTGTTTAAAGCATAAT : ACATGATGTTCTTGAAAGTTCAATA : GTGCATCTGCTGGGATCTCATCTAGGAACTCGTCTGCCACATCTCCG : GGATAGGAA : CACAAGGCACAGTTATGGTATGGACTTCAGCGGAGAAGAAATGGAG : CTGAGTCT : AAGAAACTTGAAGATTCAGGCCTA : GCGAAAAATATTATTGCCC : TAACTTGGAAATTGTCTAATTAAGCCGGCCTAACAAGATG : TCTACAGATCATTTTGACCAGATAGGCTGTAAGCAGAAATGAT : AAGATAGATGCATTTCAAGAACCGACAAACGATGGCAACACTGAAATCACAACCGGCGGCAGATCTTAATAAGCCTTTCGTCCTGATTGGATATCGGCGATGACAGTGCGATGAGCTGAAAAAAAG : TTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGG : GGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAG : GCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTC : GAAGGGGTCCGCTCACCCTTTTCGTCAAAG : CAGCCTTTGGATAAACCAGTTCCAAACGCCACATTACAAGTCACGGGCGCTGTTGGTTGGCGCAGGGAGGGTCTTGTTTATAAGAAGAATGAG : GTGTTTCTGGATATAGTAGAAAGTGTTAATCTCCTTATGTCTTCAAAAG : GTAGTGTGCTCCGTTGTGATGTAACTGGGAAAGTTCTCATGAAATGCTTTCTTTCTGGAATGCCTGATTTGAAGTTGGGGTTAAATGATAAAATTGGTCTTGAGAAAGAGTCGCAGCTTAAATCCCGTCCAACAAAGAG : CGGAAAGACTATTGAACTTGATGATGTTACTTTCCACCAATGTGTAAACTTAACGAGATTCAATTCAGAAAAGACTGTCAGCTTTGTACCACCAGATGGTGAATTCGAACTGATGAA : GTACCGCATTACCGAAGGAGTAAATCTTCCTTTCCGTGTATTGCCAACAATCAAGGAATTAGGTCGTACGCGAATGGAAGTGAATGTTAAG : GTTAAGAGTGTGTTTGGTGCAAAAATGTTTGCTCTTGGAGTTGTCATTAAAGTTCCAGTGCCAAAGCAAACTGCAAAAGCAAGCTTCCAGGTGACATCAGGGAGAGCAAAGTACAATCCATCCATTGACTCTTTGGTGTGGAA : GATAAAAAAATTTCCTGGGCAAACTGAGTCAACAATGAGTGCTGAAGTGGAGTTGATTTCGACAATAGCAGAGAAGAAGTCCTGGACTAGGCCACCAATTCAGATGGAATTCCAG : CTGCATGACCCACTTTTGTCATTGTAGGTTCCCATGTTTACGGCATCTGGACTTCGAGTTCGCTTTCTCAAG : GTATGGGAAAAGAGCGGCTACAACACAGTTGAATGGGTTCGCTATATCACAAAAGCTGGTTCTTATGAGATTAGGTGCTGAAAAATAG : GTTAGTTCTTTACGAGGACTAAGAAGAGGCTTTTGTTTCCATTCTATTTGTATATTTGACATATTCCCCCTTAAACTATTTT</gDNA_template>
            <first_frame> S  K  F  Q  K  S  L  N  T  Q  D  N   : S  H  H  N  H  F  L  *  I  T  F  Q  N  I  T  T  *  S  N  C  F  Q  I  N  T  R  I  S  S  T  E  E  K  C  C  L  K  H  N  :  T  *  C  S  *  K  F  N   : S  A  S  A  G  I  S  S  R  N  S  S  A  T  S  P  :  G  *  E  :  H  K  A  Q  L  W  Y  G  L  Q  R  R  R  N  G   : A  E  S  :  K  K  L  E  D  S  G  L  :  A  K  N  I  I  A   : L  T  W  K  L  S  N  *  A  G  L  T  R  C :   L  Q  I  I  L  T  R  *  A  V  S  R  N  D  :  K  I  D  A  F  Q  E  P  T  N  D  G  N  T  E  I  T  T  G  G  R  S  *  *  A  F  R  P  D  W  I  S  A  M  T  V  R  *  A  E  K  K  :  F  L  D  P  F  R  C  C  S  H  A  C  G  S  F  S  C  L  L  P  Q  S  P  W  R  C  P  H  Q  S  S  I  P  *  R  R  R  :  G  *  Y  G  R  C  L  S  D  A  Y  N  A  D  K  R  T  R  D  M  S  C  Q  A  D  W  R  L  L  F  L  L  H  E  N  *  Q  C  L  Y  C  D  C  S  *  H  Q  C  K  C  R  M  C  I  Q  V  C  G  *   : G  C  C  T  I  Q  I  L  F  W  W  F  F  *  R  R  C  H  S :   K  G  S  A  H  P  F  R  Q  S :   S  L  W  I  N  Q  F  Q  T  P  H  Y  K  S  R  A  L  L  V  G  A  G  R  V  L  F  I  R  R  M  R :   C  F  W  I  *  *  K  V  L  I  S  L  C  L  Q  K  :  V  V  C  S  V  V  M  *  L  G  K  F  S  *  N  A  F  F  L  E  C  L  I  *  S  W  G  *  M  I  K  L  V  L  R  K  S  R  S  L  N  P  V  Q  Q  R   : A  E  R  L  L  N  L  M  M  L  L  S  T  N  V  *  T  *  R  D  S  I  Q  K  R  L  S  A  L  Y  H  Q  M  V  N  S  N  *  *   : S  T  A  L  P  K  E  *  I  F  L  S  V  Y  C  Q  Q  S  R  N  *  V  V  R  E  W  K  *  M  L  R :   L  R  V  C  L  V  Q  K  C  L  L  L  E  L  S  L  K  F  Q  C  Q  S  K  L  Q  K  Q  A  S  R  *  H  Q  G  E  Q  S  T  I  H  P  L  T  L  W  C  G   : R  *  K  N  F  L  G  K  L  S  Q  Q  *  V  L  K  W  S  *  F  R  Q  *  Q  R  R  S  P  G  L  G  H  Q  F  R  W  N  S  S :   C  M  T  H  F  C  H  C  R  F  P  C  L  R  H  L  D  F  E  F  A  F  S  R :   Y  G  K  R  A  A  T  T  Q  L  N  G  F  A  I  S  Q  K  L  V  L  M  R  L  G  A  E  K  *  :  V  S  S  L  R  G  L  R  R  G  F  C  F  H  S  I  C  I  F  D  I  F  P  L  K  L  F  </first_frame>
            <second_frame>  A  N  F  R  K  V  S  T  H  K  T  T  :  L  T  I  I  I  S  Y  K  *  H  F  R  I  *  Q  P  E  V  T  V  S  K  L  T  R  G  *  V  P  Q  R  K  N  V  V  *  S  I  I :   H  D  V  L  E  S  S  I  :  V  H  L  L  G  S  H  L  G  T  R  L  P  H  L  R :   D  R  N :   T  R  H  S  Y  G  M  D  F  S  G  E  E  M  E  :  L  S  L :   R  N  L  K  I  Q  A  * :   R  K  I  L  L  P  :  *  L  G  N  C  L  I  K  P  A  *  Q  D   : V  Y  R  S  F  *  P  D  R  L  *  A  E  M  I :   R  *  M  H  F  K  N  R  Q  T  M  A  T  L  K  S  Q  P  A  A  D  L  N  K  P  F  V  L  I  G  Y  R  R  *  Q  C  D  E  L  K  K  S :   F  *  I  H  F  G  V  A  A  M  P  V  A  A  S  A  V  Y  F  L  N  L  R  G  D  V  L  I  N  R  L  Y  R  D  D  V  G :   G  N  M  V  D  A  F  R  M  H  I  M  Q  T  K  E  L  G  T  C  P  V  R  Q  I  G  G  C  S  F  F  Y  M  R  I  S  N  V  Y  I  V  I  V  V  S  T  N  A  N  V  A  C  A  F  K  F  V  V  E  :  A  V  A  L  F  K  S  Y  F  G  G  S  F  D  E  D  A  I   : R  R  G  P  L  T  L  F  V  K   : A  A  F  G  *  T  S  S  K  R  H  I  T  S  H  G  R  C  W  L  A  Q  G  G  S  C  L  *  E  E  *   : G  V  S  G  Y  S  R  K  C  *  S  P  Y  V  F  K  R :   *  C  A  P  L  *  C  N  W  E  S  S  H  E  M  L  S  F  W  N  A  *  F  E  V  G  V  K  *  *  N  W  S  *  E  R  V  A  A  *  I  P  S  N  K  E  :  R  K  D  Y  *  T  *  *  C  Y  F  P  P  M  C  K  L  N  E  I  Q  F  R  K  D  C  Q  L  C  T  T  R  W  *  I  R  T  D  E  :  V  P  H  Y  R  R  S  K  S  S  F  P  C  I  A  N  N  Q  G  I  R  S  Y  A  N  G  S  E  C  *   : G  *  E  C  V  W  C  K  N  V  C  S  W  S  C  H  *  S  S  S  A  K  A  N  C  K  S  K  L  P  G  D  I  R  E  S  K  V  Q  S  I  H  *  L  F  G  V  E  :  D  K  K  I  S  W  A  N  *  V  N  N  E  C  *  S  G  V  D  F  D  N  S  R  E  E  V  L  D  *  A  T  N  S  D  G  I  P   : A  A  *  P  T  F  V  I  V  G  S  H  V  Y  G  I  W  T  S  S  S  L  S  Q   : G  M  G  K  E  R  L  Q  H  S  *  M  G  S  L  Y  H  K  S  W  F  L  *  D  *  V  L  K  N  R :   L  V  L  Y  E  D  *  E  E  A  F  V  S  I  L  F  V  Y  L  T  Y  S  P  L  N  Y  F </second_frame>
            <third_frame>   Q  I  S  E  K  S  Q  H  T  R  Q  L :   S  P  *  S  F  L  I  N  N  I  S  E  Y  N  N  L  K  *  L  F  P  N  *  H  E  D  K  F  H  R  G  K  M  L  F  K  A  *   : Y  M  M  F  L  K  V  Q  * :   C  I  C  W  D  L  I  *  E  L  V  C  H  I  S   : G  I  G   : T  Q  G  T  V  M  V  W  T  S  A  E  K  K  W  S :   *  V   : *  E  T  *  R  F  R  P   : S  E  K  Y  Y  C  P :   N  L  E  I  V  *  L  S  R  P  N  K  M  :  S  T  D  H  F  D  Q  I  G  C  K  Q  K  *   : *  D  R  C  I  S  R  T  D  K  R  W  Q  H  *  N  H  N  R  R  Q  I  L  I  S  L  S  S  *  L  D  I  G  D  D  S  A  M  S  *  K  K   : V  S  R  S  I  S  V  L  Q  P  C  L  W  Q  L  Q  L  F  T  S  S  I  S  V  A  M  S  S  S  I  V  Y  T  V  T  T  S   : G  V  I  W  *  M  P  F  G  C  I  *  C  R  Q  K  N  S  G  H  V  L  S  G  R  L  E  V  A  L  S  S  T  *  E  L  A  M  S  I  L  *  L  *  L  A  P  M  Q  M  S  H  V  H  S  S  L  W  L  R :   L  L  H  Y  S  N  L  I  L  V  V  L  L  T  K  M  P  F  :  E  G  V  R  S  P  F  S  S  K  :  Q  P  L  D  K  P  V  P  N  A  T  L  Q  V  T  G  A  V  G  W  R  R  E  G  L  V  Y  K  K  N  E  :  V  F  L  D  I  V  E  S  V  N  L  L  M  S  S  K   : G  S  V  L  R  C  D  V  T  G  K  V  L  M  K  C  F  L  S  G  M  P  D  L  K  L  G  L  N  D  K  I  G  L  E  K  E  S  Q  L  K  S  R  P  T  K  S :   G  K  T  I  E  L  D  D  V  T  F  H  Q  C  V  N  L  T  R  F  N  S  E  K  T  V  S  F  V  P  P  D  G  E  F  E  L  M  K :   Y  R  I  T  E  G  V  N  L  P  F  R  V  L  P  T  I  K  E  L  G  R  T  R  M  E  V  N  V  K  :  V  K  S  V  F  G  A  K  M  F  A  L  G  V  V  I  K  V  P  V  P  K  Q  T  A  K  A  S  F  Q  V  T  S  G  R  A  K  Y  N  P  S  I  D  S  L  V  W  K :   I  K  K  F  P  G  Q  T  E  S  T  M  S  A  E  V  E  L  I  S  T  I  A  E  K  K  S  W  T  R  P  P  I  Q  M  E  F  Q  :  L  H  D  P  L  L  S  L  *  V  P  M  F  T  A  S  G  L  R  V  R  F  L  K  :  V  W  E  K  S  G  Y  N  T  V  E  W  V  R  Y  I  T  K  A  G  S  Y  E  I  R  C  *  K  I   : G  *  F  F  T  R  T  K  K  R  L  L  F  P  F  Y  L  Y  I  *  H  I  P  P  *  T  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62696" stop="62650"/>
                    <exon start="62280" stop="62226"/>
                    <exon start="60264" stop="60235"/>
                    <exon start="60007" stop="59915"/>
                    <exon start="59825" stop="59777"/>
                    <exon start="59706" stop="59568"/>
                    <exon start="57932" stop="57816"/>
                    <exon start="57145" stop="57055"/>
                    <exon start="56953" stop="56811"/>
                    <exon start="54950" stop="54836"/>
                    <exon start="54071" stop="54045"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>903</number_coding_nucleotides>
                  <number_encoded_amino_acids>301</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LAPMQMSHVHSSLWLRLLHYSNLILVVLLTKMPFEGVRSPFSSKQPLDKPVPNATLQVTGAVGWRREGLVYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKVLMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKELGRTRMEVNVKVKSVFGAKMFALGVVIKVPVPKQTAKASFQVTSGRAKYNPSIDSLVWKIKKFPGQTESTMSAEVELISTIAEKKSWTRPPIQMEFQLHDPLLSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="66145" e_stop="65910"/>
            <exon e_start="62827" e_stop="62650"/>
            <exon e_start="62280" e_stop="62021"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.973"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="66145" e_stop="65910" e_length="236"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="65909" i_stop="62828" i_length="3082"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="62827" e_stop="62650" e_length="178"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="62649" i_stop="62281" i_length="369"/>
          </intron>
          <exon e_serial="3" e_score="0.973">
            <gDNA_exon_boundary e_start="62280" e_stop="62021" e_length="260"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66145" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62190"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203306" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66134" stop="65910"/>
              <exon start="62827" stop="62650"/>
              <exon start="62280" stop="62021"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343041" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66116" stop="65910"/>
              <exon start="62827" stop="62791"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66079" stop="65910"/>
              <exon start="62827" stop="62659"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469582" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="6" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAAGCTGTCCCCAACTGGCGACATTTCTCTCCCATCTACGACAAATCTAACTGTTCTTCCCTACGTTTTTCATTTCATTATTATTGAAGAACCTTTCGAATCATTTAGATCTGACTTGATCGAAGTTTCTAGATCCATTTCGGTGTTGCAGCCATGCCTGTGGCAGCTTCAGCTGTTTACTTCCTCAATCTCCGTGGCGATGTCCTCATCAATCGTCTATACCGTGACGACGTCGG : GGGTAATATGGTAGATGCCTTTCGGATGCATATAATGCAGACAAAAGAACTCGGGACATGTCCTGTCAGGCAGATTGGAGGTTGCTCTTTCTTCTACATGAGAATTAGCAATGTCTATATTGTGATTGTAGTTAGCACCAATGCAAATGTCGCATGTGCATTCAAGTTTGTGGTTGAG : GCTGTTGCACTATTCAAATCTTATTTTGGTGGTTCTTTTGACGAAGATGCCATTCGTAATAACTTTGTCCTAATTTACGAGCTTTTGGATGGTACGCCATTTGGAGATTATTTATTTTGACATTTTAATCTAAAAGTTCAATGTAGAAACCCTTCCTGTCTTATCAAAACAGATATCCTTTCTGGATAACTAATCCAAAAAGAAAAAATCTCTCTGTATTAATTATGTACTACTTCAATTTTCAATTTTCTCAAGTGATT</gDNA_template>
            <first_frame> *  A  V  P  N  W  R  H  F  S  P  I  Y  D  K  S  N  C  S  S  L  R  F  S  F  H  Y  Y  *  R  T  F  R  I  I  *  I  *  L  D  R  S  F  *  I  H  F  G  V  A  A  M  P  V  A  A  S  A  V  Y  F  L  N  L  R  G  D  V  L  I  N  R  L  Y  R  D  D  V  G :   G  N  M  V  D  A  F  R  M  H  I  M  Q  T  K  E  L  G  T  C  P  V  R  Q  I  G  G  C  S  F  F  Y  M  R  I  S  N  V  Y  I  V  I  V  V  S  T  N  A  N  V  A  C  A  F  K  F  V  V  E  :  A  V  A  L  F  K  S  Y  F  G  G  S  F  D  E  D  A  I  R  N  N  F  V  L  I  Y  E  L  L  D  G  T  P  F  G  D  Y  L  F  *  H  F  N  L  K  V  Q  C  R  N  P  S  C  L  I  K  T  D  I  L  S  G  *  L  I  Q  K  E  K  I  S  L  Y  *  L  C  T  T  S  I  F  N  F  L  K  *   </first_frame>
            <second_frame>  K  L  S  P  T  G  D  I  S  L  P  S  T  T  N  L  T  V  L  P  Y  V  F  H  F  I  I  I  E  E  P  F  E  S  F  R  S  D  L  I  E  V  S  R  S  I  S  V  L  Q  P  C  L  W  Q  L  Q  L  F  T  S  S  I  S  V  A  M  S  S  S  I  V  Y  T  V  T  T  S   : G  V  I  W  *  M  P  F  G  C  I  *  C  R  Q  K  N  S  G  H  V  L  S  G  R  L  E  V  A  L  S  S  T  *  E  L  A  M  S  I  L  *  L  *  L  A  P  M  Q  M  S  H  V  H  S  S  L  W  L  R :   L  L  H  Y  S  N  L  I  L  V  V  L  L  T  K  M  P  F  V  I  T  L  S  *  F  T  S  F  W  M  V  R  H  L  E  I  I  Y  F  D  I  L  I  *  K  F  N  V  E  T  L  P  V  L  S  K  Q  I  S  F  L  D  N  *  S  K  K  K  K  S  L  C  I  N  Y  V  L  L  Q  F  S  I  F  S  S  D  </second_frame>
            <third_frame>   S  C  P  Q  L  A  T  F  L  S  H  L  R  Q  I  *  L  F  F  P  T  F  F  I  S  L  L  L  K  N  L  S  N  H  L  D  L  T  *  S  K  F  L  D  P  F  R  C  C  S  H  A  C  G  S  F  S  C  L  L  P  Q  S  P  W  R  C  P  H  Q  S  S  I  P  *  R  R  R  :  G  *  Y  G  R  C  L  S  D  A  Y  N  A  D  K  R  T  R  D  M  S  C  Q  A  D  W  R  L  L  F  L  L  H  E  N  *  Q  C  L  Y  C  D  C  S  *  H  Q  C  K  C  R  M  C  I  Q  V  C  G  *   : G  C  C  T  I  Q  I  L  F  W  W  F  F  *  R  R  C  H  S  *  *  L  C  P  N  L  R  A  F  G  W  Y  A  I  W  R  L  F  I  L  T  F  *  S  K  S  S  M  *  K  P  F  L  S  Y  Q  N  R  Y  P  F  W  I  T  N  P  K  R  K  N  L  S  V  L  I  M  Y  Y  F  N  F  Q  F  S  Q  V  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66013" stop="65910"/>
                    <exon start="62827" stop="62650"/>
                    <exon start="62280" stop="62161"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>399</number_coding_nucleotides>
                  <number_encoded_amino_acids>133</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IHFGVAAMPVAASAVYFLNLRGDVLINRLYRDDVGGNMVDAFRMHIMQTKELGTCPVRQIGGCSFFYMRISNVYIVIVVSTNANVACAFKFVVEAVALFKSYFGGSFDEDAIRNNFVLIYELLDGTPFGDYLF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="66380" PGL_stop="70393"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="66380" e_stop="66726"/>
            <exon e_start="70028" e_stop="70393"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.978" acc_prob="0.985" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="66380" e_stop="66726" e_length="347"/>
          </exon>
          <intron i_serial="1" don_prob="0.978" acc_prob="0.985">
            <gDNA_intron_boundary i_start="66727" i_stop="70027" i_length="3301"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="70028" e_stop="70393" e_length="366"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66380" stop="66726"/>
              <exon start="70028" stop="70393"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343147" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66425" stop="66726"/>
              <exon start="70028" stop="70318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312431" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66425" stop="66726"/>
              <exon start="70028" stop="70240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312429" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66434" stop="66726"/>
              <exon start="70028" stop="70229"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321006" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66556" stop="66726"/>
              <exon start="70028" stop="70357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319811" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACATTAGTACCTTTTTTTCAGCTCATCGCACTGTCATCGCCGATATCCAATCAGGACGAAAGGCTTATTAAGATCTGCCGCCGGTTGTGATTTCAGTGTTGCCATCGTTTGTCGGTTCTTGAAATGCATCTATCTTCTATCTAGCACAAGTGATGGGTATGTTTAGGAGATTAGCTGGGCTTCTAGGGTTTTCAAAGGATGAAGGTCACGAAGTGAGAGATGAAAGTGTAGGACCTCACAATAATCTTCCTCGTAAAGGATTCAGTGTCCCTGTTCAGGTTCCTGTTTCCAGAGATCTACCTGGTCCTATCCTTGTTCAATGCAATAGAGGTGCTGGAGGCGTTCAG : GGATTGAGATGGTATGCCAAGCGTCTTAGAATAGATGAAGACGGAGATGTGGCAGACGAGTTCCTAGATGAGATCCCAGCAGATGCACCTTCTAGTACAGAAGAGAATAACAAGAAATTCCGTAAGTTTGAATTGAAGTACACTACAAAGCCTGCGAATGTAACAGGCCAGGCACTCTCAGCTGCAGGAAAAATTAAATATCGTGTGGAATATCAAGGCAAATTGGAGTGGATTTGAAAACTTACTATGTGTAGTCATTACATTTGAGATGAGGATTTCAGTAAAATGACTGCAGCTACGCAGCTTGCTTGATATTTTTGCTTTATTCTGAAGGACTTACAGTGTGTTTATGTGGAGTGGTATTGA</gDNA_template>
            <first_frame> T  L  V  P  F  F  Q  L  I  A  L  S  S  P  I  S  N  Q  D  E  R  L  I  K  I  C  R  R  L  *  F  Q  C  C  H  R  L  S  V  L  E  M  H  L  S  S  I  *  H  K  *  W  V  C  L  G  D  *  L  G  F  *  G  F  Q  R  M  K  V  T  K  *  E  M  K  V  *  D  L  T  I  I  F  L  V  K  D  S  V  S  L  F  R  F  L  F  P  E  I  Y  L  V  L  S  L  F  N  A  I  E  V  L  E  A  F  R :   D  *  D  G  M  P  S  V  L  E  *  M  K  T  E  M  W  Q  T  S  S  *  M  R  S  Q  Q  M  H  L  L  V  Q  K  R  I  T  R  N  S  V  S  L  N  *  S  T  L  Q  S  L  R  M  *  Q  A  R  H  S  Q  L  Q  E  K  L  N  I  V  W  N  I  K  A  N  W  S  G  F  E  N  L  L  C  V  V  I  T  F  E  M  R  I  S  V  K  *  L  Q  L  R  S  L  L  D  I  F  A  L  F  *  R  T  Y  S  V  F  M  W  S  G  I   </first_frame>
            <second_frame>  H  *  Y  L  F  F  S  S  S  H  C  H  R  R  Y  P  I  R  T  K  G  L  L  R  S  A  A  G  C  D  F  S  V  A  I  V  C  R  F  L  K  C  I  Y  L  L  S  S  T  S  D  G  Y  V  *  E  I  S  W  A  S  R  V  F  K  G  *  R  S  R  S  E  R  *  K  C  R  T  S  Q  *  S  S  S  *  R  I  Q  C  P  C  S  G  S  C  F  Q  R  S  T  W  S  Y  P  C  S  M  Q  *  R  C  W  R  R  S   : G  I  E  M  V  C  Q  A  S  *  N  R  *  R  R  R  C  G  R  R  V  P  R  *  D  P  S  R  C  T  F  *  Y  R  R  E  *  Q  E  I  P  *  V  *  I  E  V  H  Y  K  A  C  E  C  N  R  P  G  T  L  S  C  R  K  N  *  I  S  C  G  I  S  R  Q  I  G  V  D  L  K  T  Y  Y  V  *  S  L  H  L  R  *  G  F  Q  *  N  D  C  S  Y  A  A  C  L  I  F  L  L  Y  S  E  G  L  T  V  C  L  C  G  V  V  L  </second_frame>
            <third_frame>   I  S  T  F  F  S  A  H  R  T  V  I  A  D  I  Q  S  G  R  K  A  Y  *  D  L  P  P  V  V  I  S  V  L  P  S  F  V  G  S  *  N  A  S  I  F  Y  L  A  Q  V  M  G  M  F  R  R  L  A  G  L  L  G  F  S  K  D  E  G  H  E  V  R  D  E  S  V  G  P  H  N  N  L  P  R  K  G  F  S  V  P  V  Q  V  P  V  S  R  D  L  P  G  P  I  L  V  Q  C  N  R  G  A  G  G  V  Q  :  G  L  R  W  Y  A  K  R  L  R  I  D  E  D  G  D  V  A  D  E  F  L  D  E  I  P  A  D  A  P  S  S  T  E  E  N  N  K  K  F  R  K  F  E  L  K  Y  T  T  K  P  A  N  V  T  G  Q  A  L  S  A  A  G  K  I  K  Y  R  V  E  Y  Q  G  K  L  E  W  I  *  K  L  T  M  C  S  H  Y  I  *  D  E  D  F  S  K  M  T  A  A  T  Q  L  A  *  Y  F  C  F  I  L  K  D  L  Q  C  V  Y  V  E  W  Y  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66502" stop="66726"/>
                    <exon start="70028" stop="70264"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>459</number_coding_nucleotides>
                  <number_encoded_amino_acids>153</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NASIFYLAQVMGMFRRLAGLLGFSKDEGHEVRDESVGPHNNLPRKGFSVPVQVPVSRDLPGPILVQCNRGAGGVQGLRWYAKRLRIDEDGDVADEFLDEIPADAPSSTEENNKKFRKFELKYTTKPANVTGQALSAAGKIKYRVEYQGKLEWI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="72470" PGL_stop="71838"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72470" e_stop="72339"/>
            <exon e_start="72234" e_stop="71838"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.848" acc_prob="0.393" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="72470" e_stop="72339" e_length="132"/>
          </exon>
          <intron i_serial="1" don_prob="0.848" acc_prob="0.393">
            <gDNA_intron_boundary i_start="72338" i_stop="72235" i_length="104"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="72234" e_stop="71838" e_length="397"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72470" stop="72339"/>
              <exon start="72234" stop="71838"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347157" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGGGTTTTGCTTTAGTTTGGCTTTTATGCTTTTTCTCATAGTTACATTACTCTGGGCGTGAAAATTTTCTGTTGTTCATCCCTCCACGTGGGAATCTATCGAGTTCTTCTGCTGAAGGTAATGCTTGTTCAG : CCACAAAGTTATCACTTTCTACGCAAATTTTGTATGTGGTCTTGGAGGATCTGACAAAAAATGATGCATACCCTTCAGACTTTTTATCATGATGTAGTATTGATTATACATGTAATTCGTTCATTAGAATTTCTTGCATATGGTATTGTCTTGTACTGCCAAGCTTGTGTATCTTTGAAGTAGCCTTCGTCATGTAATCTGCAGGAGATGCAATCGAAACTCTCTTGCTGTTCGAGTAAATCAGCTTGTCAATGAGAAAACATTTCCCGTCTGAAATACTGAATTCATGCTTTGCAGTTTGGTAGTCATAATGTGCAAAGTGATAATATACTTATGTTTAAATGTTCATATGGATTGGTGATGATTATATTTATAGATTATCTTTTCTCTTTCTCTT</gDNA_template>
            <first_frame> R  V  L  L  *  F  G  F  Y  A  F  S  H  S  Y  I  T  L  G  V  K  I  F  C  C  S  S  L  H  V  G  I  Y  R  V  L  L  L  K  V  M  L  V  Q  :  P  Q  S  Y  H  F  L  R  K  F  C  M  W  S  W  R  I  *  Q  K  M  M  H  T  L  Q  T  F  Y  H  D  V  V  L  I  I  H  V  I  R  S  L  E  F  L  A  Y  G  I  V  L  Y  C  Q  A  C  V  S  L  K  *  P  S  S  C  N  L  Q  E  M  Q  S  K  L  S  C  C  S  S  K  S  A  C  Q  *  E  N  I  S  R  L  K  Y  *  I  H  A  L  Q  F  G  S  H  N  V  Q  S  D  N  I  L  M  F  K  C  S  Y  G  L  V  M  I  I  F  I  D  Y  L  F  S  F  S  </first_frame>
            <second_frame>  G  F  C  F  S  L  A  F  M  L  F  L  I  V  T  L  L  W  A  *  K  F  S  V  V  H  P  S  T  W  E  S  I  E  F  F  C  *  R  *  C  L  F  S :   H  K  V  I  T  F  Y  A  N  F  V  C  G  L  G  G  S  D  K  K  *  C  I  P  F  R  L  F  I  M  M  *  Y  *  L  Y  M  *  F  V  H  *  N  F  L  H  M  V  L  S  C  T  A  K  L  V  Y  L  *  S  S  L  R  H  V  I  C  R  R  C  N  R  N  S  L  A  V  R  V  N  Q  L  V  N  E  K  T  F  P  V  *  N  T  E  F  M  L  C  S  L  V  V  I  M  C  K  V  I  I  Y  L  C  L  N  V  H  M  D  W  *  *  L  Y  L  *  I  I  F  S  L  S  L </second_frame>
            <third_frame>   G  F  A  L  V  W  L  L  C  F  F  S  *  L  H  Y  S  G  R  E  N  F  L  L  F  I  P  P  R  G  N  L  S  S  S  S  A  E  G  N  A  C  S   : A  T  K  L  S  L  S  T  Q  I  L  Y  V  V  L  E  D  L  T  K  N  D  A  Y  P  S  D  F  L  S  *  C  S  I  D  Y  T  C  N  S  F  I  R  I  S  C  I  W  Y  C  L  V  L  P  S  L  C  I  F  E  V  A  F  V  M  *  S  A  G  D  A  I  E  T  L  L  L  F  E  *  I  S  L  S  M  R  K  H  F  P  S  E  I  L  N  S  C  F  A  V  W  *  S  *  C  A  K  *  *  Y  T  Y  V  *  M  F  I  W  I  G  D  D  Y  I  Y  R  L  S  F  L  F  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0024F02.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="83056" PGL_stop="77920"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="83056" e_stop="82722"/>
            <exon e_start="82521" e_stop="82421"/>
            <exon e_start="80547" e_stop="80326"/>
            <exon e_start="79131" e_stop="78913"/>
            <exon e_start="78786" e_stop="78701"/>
            <exon e_start="78603" e_stop="78507"/>
            <exon e_start="78138" e_stop="78046"/>
            <exon e_start="77966" e_stop="77920"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.968" acc_prob="0.998" e_score="0.997"/>
          <exon-intron don_prob="0.999" acc_prob="0.742" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.947" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.719" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.765" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="83056" e_stop="82722" e_length="335"/>
          </exon>
          <intron i_serial="1" don_prob="0.968" acc_prob="0.998">
            <gDNA_intron_boundary i_start="82721" i_stop="82522" i_length="200"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="82521" e_stop="82421" e_length="101"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.742">
            <gDNA_intron_boundary i_start="82420" i_stop="80548" i_length="1873"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="80547" e_stop="80326" e_length="222"/>
          </exon>
          <intron i_serial="3" don_prob="0.900" acc_prob="0.947">
            <gDNA_intron_boundary i_start="80325" i_stop="79132" i_length="1194"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="79131" e_stop="78913" e_length="219"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="78912" i_stop="78787" i_length="126"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="78786" e_stop="78701" e_length="86"/>
          </exon>
          <intron i_serial="5" don_prob="0.719" acc_prob="0.983">
            <gDNA_intron_boundary i_start="78700" i_stop="78604" i_length="97"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="78603" e_stop="78507" e_length="97"/>
          </exon>
          <intron i_serial="6" don_prob="0.978" acc_prob="0.765">
            <gDNA_intron_boundary i_start="78506" i_stop="78139" i_length="368"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="78138" e_stop="78046" e_length="93"/>
          </exon>
          <intron i_serial="7" don_prob="0.996" acc_prob="0.991">
            <gDNA_intron_boundary i_start="78045" i_stop="77967" i_length="79"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="77966" e_stop="77920" e_length="47"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83056" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206424" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83030" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E417469" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83030" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E446190" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83002" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80403"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291237" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83001" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80334"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272895" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82995" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80528"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303522" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82994" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80326"/>
              <exon start="79131" stop="79039"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212913" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82991" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80431"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269798" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82983" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80326"/>
              <exon start="79131" stop="79032"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368254" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82983" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80326"/>
              <exon start="79131" stop="79047"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368405" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82983" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80342"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246966" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82769" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80326"/>
              <exon start="79131" stop="78949"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245539" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82444" stop="82421"/>
              <exon start="80547" stop="80326"/>
              <exon start="79131" stop="78913"/>
              <exon start="78786" stop="78701"/>
              <exon start="78603" stop="78507"/>
              <exon start="78138" stop="78046"/>
              <exon start="77966" stop="77920"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698338" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82438" stop="82421"/>
              <exon start="80547" stop="80326"/>
              <exon start="79131" stop="78913"/>
              <exon start="78786" stop="78768"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274337" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79089" stop="78913"/>
              <exon start="78786" stop="78701"/>
              <exon start="78603" stop="78507"/>
              <exon start="78138" stop="78046"/>
              <exon start="77966" stop="77937"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254652" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACCATTTTTATATTAGGACGGTGTTGCTCGTTCTTCTTTTTGCCGATCAGCCAGTGAAAGTAGACGCCGAGCCATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTG : TTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAG : TTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTGCAGTCGAGTGGTCTCTATGTATGAGAGAATG : GTTAAATTCCATATAATTTCCCAGCATAAACTTAGAAGATGTAGCGGTTCAAATATTTCTTCGCTGTCATACCTCAACATGGAGCAGCTAACGAAGGCATTGGCGACTTTATTTAATCTTTATGAAGCAAATCGTACTACAGCGCCCATCTTCAAAAATGAAGCTGATTTTTTTTCCTTTTATGTGCTTCTCCACCTTGATTCCAAAACCCAAGGAACA : GGGGAGACACTGTCTTTATGGTTTCGTCGCGTTCCTTCTCACATTATGAAGTCGACAGAAATGAATTTTGCTCGGAAGATCTTGAG : ATACTTTAAATTGGGCTTCTTCAAGAAATTTATTCATACAACAGAGTCCGAGGCATCGTACTTGCAGTATTGCATTATTGAACCTTCTATCAATGAG : GTTCGATCACTAGCTATTTCCTGTGTGAATCATGGAGGATACAAGCCTCAGCCTTTTCCCTTGGTGGCTCTTTCCAAACTCCTAATGATGAAG : GAATGGGATGTAGCATCTTTCTGCAAAGACAGTGGCCTTCAAACCTC</gDNA_template>
            <first_frame> T  I  F  I  L  G  R  C  C  S  F  F  F  L  P  I  S  Q  *  K  *  T  P  S  H  G  R  K  E  S  T  S  V  Q  A  K  T  *  F  F  L  F  F  F  Q  I  L  P  P  F  S  T  F  P  Q  L  S  V  P  P  H  Q  K  F  Q  F  F  Y  A  *  W  Y  P  N  S  E  Q  R  F  R  Q  Q  D  E  L  K  Q  L  G  Q  S  H  *  *  R  Y  *  R  H  S  E  F  S  W  N  L  P  F  H  V  S  C :   *  G  E  G  E  K  R  E  A  A  R  L  S  C  V  *  E  A  T  W  K  S  S  T  V  I  T  K  P  C  C  *  K   : V  L  *  D  Y  I  R  E  D  S  A  R  F  *  C  E  A  S  L  G  V  G  R  Y  F  E  L  S  V  *  L  A  G  L  Y  R  A  S  I  *  G  G  S  *  L  H  L  *  *  D  E  V  H  *  T  R  S  K  Y  A  K  Y  L  L  Q  S  S  G  L  Y  V  *  E  N   : G  *  I  P  Y  N  F  P  A  *  T  *  K  M  *  R  F  K  Y  F  F  A  V  I  P  Q  H  G  A  A  N  E  G  I  G  D  F  I  *  S  L  *  S  K  S  Y  Y  S  A  H  L  Q  K  *  S  *  F  F  F  L  L  C  A  S  P  P  *  F  Q  N  P  R  N   : R  G  D  T  V  F  M  V  S  S  R  S  F  S  H  Y  E  V  D  R  N  E  F  C  S  E  D  L  E  :  I  L  *  I  G  L  L  Q  E  I  Y  S  Y  N  R  V  R  G  I  V  L  A  V  L  H  Y  *  T  F  Y  Q  *   : G  S  I  T  S  Y  F  L  C  E  S  W  R  I  Q  A  S  A  F  S  L  G  G  S  F  Q  T  P  N  D  E   : G  M  G  C  S  I  F  L  Q  R  Q  W  P  S  N  L </first_frame>
            <second_frame>  P  F  L  Y  *  D  G  V  A  R  S  S  F  C  R  S  A  S  E  S  R  R  R  A  M  A  G  R  S  Q  P  P  Y  R  P  R  P  N  F  S  S  S  S  S  R  S  Y  H  P  S  Q  P  S  R  N  F  Q  S  H  H  T  K  N  F  N  S  S  T  P  N  G  T  P  I  Q  N  N  A  S  D  N  K  T  S  S  S  N  W  D  K  V  I  D  E  D  I  D  D  I  Q  S  L  V  G  T  C  P  F  M  C  P   : V  E  E  R  E  K  R  E  R  L  R  D  L  A  V  F  E  R  L  H  G  N  P  R  Q  S  S  P  S  L  A  V  K  K  :  F  C  R  T  I  S  V  K  T  L  Q  D  S  D  V  R  P  L  S  V  L  E  D  T  L  N  Y  L  C  N  L  L  D  S  T  E  H  P  F  E  V  V  H  D  F  I  F  D  R  M  R  S  I  R  Q  D  L  S  M  Q  N  I  S  C  S  R  V  V  S  M  Y  E  R  M  :  V  K  F  H  I  I  S  Q  H  K  L  R  R  C  S  G  S  N  I  S  S  L  S  Y  L  N  M  E  Q  L  T  K  A  L  A  T  L  F  N  L  Y  E  A  N  R  T  T  A  P  I  F  K  N  E  A  D  F  F  S  F  Y  V  L  L  H  L  D  S  K  T  Q  G  T  :  G  E  T  L  S  L  W  F  R  R  V  P  S  H  I  M  K  S  T  E  M  N  F  A  R  K  I  L  R :   Y  F  K  L  G  F  F  K  K  F  I  H  T  T  E  S  E  A  S  Y  L  Q  Y  C  I  I  E  P  S  I  N  E  :  V  R  S  L  A  I  S  C  V  N  H  G  G  Y  K  P  Q  P  F  P  L  V  A  L  S  K  L  L  M  M  K  :  E  W  D  V  A  S  F  C  K  D  S  G  L  Q  T   </second_frame>
            <third_frame>   H  F  Y  I  R  T  V  L  L  V  L  L  F  A  D  Q  P  V  K  V  D  A  E  P  W  P  E  G  V  N  L  R  T  G  Q  D  L  I  F  P  L  L  L  P  D  P  T  T  L  L  N  L  P  A  T  F  S  P  T  T  P  K  I  S  I  L  L  R  L  M  V  P  Q  F  R  T  T  L  P  T  T  R  R  A  Q  A  I  G  T  K  S  L  M  K  I  L  T  T  F  R  V  *  L  E  L  A  L  S  C  V  L  :  L  R  R  G  R  K  E  R  G  C  E  T  *  L  C  L  R  G  Y  M  E  I  L  D  S  H  H  Q  A  L  L  L  K  S :   S  V  G  L  Y  P  *  R  L  C  K  I  L  M  *  G  L  S  R  C  W  K  I  L  *  T  I  C  V  T  C  W  T  L  P  S  I  H  L  R  W  F  M  T  S  S  L  I  G  *  G  P  L  D  K  I  *  V  C  K  I  S  L  A  V  E  W  S  L  C  M  R  E  W :   L  N  S  I  *  F  P  S  I  N  L  E  D  V  A  V  Q  I  F  L  R  C  H  T  S  T  W  S  S  *  R  R  H  W  R  L  Y  L  I  F  M  K  Q  I  V  L  Q  R  P  S  S  K  M  K  L  I  F  F  P  F  M  C  F  S  T  L  I  P  K  P  K  E  Q :   G  R  H  C  L  Y  G  F  V  A  F  L  L  T  L  *  S  R  Q  K  *  I  L  L  G  R  S  *   : D  T  L  N  W  A  S  S  R  N  L  F  I  Q  Q  S  P  R  H  R  T  C  S  I  A  L  L  N  L  L  S  M  R :   F  D  H  *  L  F  P  V  *  I  M  E  D  T  S  L  S  L  F  P  W  W  L  F  P  N  S  *  *  *  R :   N  G  M  *  H  L  S  A  K  T  V  A  F  K  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83040" stop="82722"/>
                    <exon start="82521" stop="82421"/>
                    <exon start="80547" stop="80326"/>
                    <exon start="79131" stop="78913"/>
                    <exon start="78786" stop="78701"/>
                    <exon start="78603" stop="78507"/>
                    <exon start="78138" stop="78046"/>
                    <exon start="77966" stop="77922"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1182</number_coding_nucleotides>
                  <number_encoded_amino_acids>394</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DGVARSSFCRSASESRRRAMAGRSQPPYRPRPNFSSSSSRSYHPSQPSRNFQSHHTKNFNSSTPNGTPIQNNASDNKTSSSNWDKVIDEDIDDIQSLVGTCPFMCPVEEREKRERLRDLAVFERLHGNPRQSSPSLAVKKFCRTISVKTLQDSDVRPLSVLEDTLNYLCNLLDSTEHPFEVVHDFIFDRMRSIRQDLSMQNISCSRVVSMYERMVKFHIISQHKLRRCSGSNISSLSYLNMEQLTKALATLFNLYEANRTTAPIFKNEADFFSFYVLLHLDSKTQGTGETLSLWFRRVPSHIMKSTEMNFARKILRYFKLGFFKKFIHTTESEASYLQYCIIEPSINEVRSLAISCVNHGGYKPQPFPLVALSKLLMMKEWDVASFCKDSGLQT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="83056" e_stop="82722"/>
            <exon e_start="82521" e_stop="82421"/>
            <exon e_start="80547" e_stop="80326"/>
            <exon e_start="79131" e_stop="78908"/>
            <exon e_start="78786" e_stop="78701"/>
            <exon e_start="78603" e_stop="78507"/>
            <exon e_start="78138" e_stop="78046"/>
            <exon e_start="77966" e_stop="77945"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.968" acc_prob="0.998" e_score="0.997"/>
          <exon-intron don_prob="0.999" acc_prob="0.742" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.947" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.719" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.765" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="83056" e_stop="82722" e_length="335"/>
          </exon>
          <intron i_serial="1" don_prob="0.968" acc_prob="0.998">
            <gDNA_intron_boundary i_start="82721" i_stop="82522" i_length="200"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="82521" e_stop="82421" e_length="101"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.742">
            <gDNA_intron_boundary i_start="82420" i_stop="80548" i_length="1873"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="80547" e_stop="80326" e_length="222"/>
          </exon>
          <intron i_serial="3" don_prob="0.900" acc_prob="0.947">
            <gDNA_intron_boundary i_start="80325" i_stop="79132" i_length="1194"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="79131" e_stop="78908" e_length="224"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="78907" i_stop="78787" i_length="121"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="78786" e_stop="78701" e_length="86"/>
          </exon>
          <intron i_serial="5" don_prob="0.719" acc_prob="0.983">
            <gDNA_intron_boundary i_start="78700" i_stop="78604" i_length="97"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="78603" e_stop="78507" e_length="97"/>
          </exon>
          <intron i_serial="6" don_prob="0.978" acc_prob="0.765">
            <gDNA_intron_boundary i_start="78506" i_stop="78139" i_length="368"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="78138" e_stop="78046" e_length="93"/>
          </exon>
          <intron i_serial="7" don_prob="0.996" acc_prob="0.991">
            <gDNA_intron_boundary i_start="78045" i_stop="77967" i_length="79"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="77966" e_stop="77945" e_length="22"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83056" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206424" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83030" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E417469" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83030" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E446190" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83002" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80403"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291237" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83001" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80334"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272895" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82995" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80528"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303522" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82994" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80326"/>
              <exon start="79131" stop="79039"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212913" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82991" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80431"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269798" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82983" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80326"/>
              <exon start="79131" stop="79032"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368254" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82983" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80326"/>
              <exon start="79131" stop="79047"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368405" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82983" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80342"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246966" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82769" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80547" stop="80326"/>
              <exon start="79131" stop="78949"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245539" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79090" stop="78908"/>
              <exon start="78786" stop="78701"/>
              <exon start="78603" stop="78507"/>
              <exon start="78138" stop="78046"/>
              <exon start="77966" stop="77945"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255110" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACCATTTTTATATTAGGACGGTGTTGCTCGTTCTTCTTTTTGCCGATCAGCCAGTGAAAGTAGACGCCGAGCCATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTG : TTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAG : TTCTGTAGGACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTGCAGTCGAGTGGTCTCTATGTATGAGAGAATG : GTTAAATTCCATATAATTTCCCAGCATAAACTTAGAAGATGTAGCGGTTCAAATATTTCTTCGCTGTCATACCTCAACATGGAGCAGCTAACGAAGGCATTGGCGACTTTATTTAATCTTTATGAAGCAAATCGTACTACAGCGCCCATCTTCAAAAATGAAGCTGATTTTTTTTCCTTTTATGTGCTTCTCCACCTTGATTCCAAAACCCAAGGAACAGTTGC : GGGGAGACACTGTCTTTATGGTTTCGTCGCGTTCCTTCTCACATTATGAAGTCGACAGAAATGAATTTTGCTCGGAAGATCTTGAG : ATACTTTAAATTGGGCTTCTTCAAGAAATTTATTCATACAACAGAGTCCGAGGCATCGTACTTGCAGTATTGCATTATTGAACCTTCTATCAATGAG : GTTCGATCACTAGCTATTTCCTGTGTGAATCATGGAGGATACAAGCCTCAGCCTTTTCCCTTGGTGGCTCTTTCCAAACTCCTAATGATGAAG : GAATGGGATGTAGCATCTTTCT</gDNA_template>
            <first_frame> T  I  F  I  L  G  R  C  C  S  F  F  F  L  P  I  S  Q  *  K  *  T  P  S  H  G  R  K  E  S  T  S  V  Q  A  K  T  *  F  F  L  F  F  F  Q  I  L  P  P  F  S  T  F  P  Q  L  S  V  P  P  H  Q  K  F  Q  F  F  Y  A  *  W  Y  P  N  S  E  Q  R  F  R  Q  Q  D  E  L  K  Q  L  G  Q  S  H  *  *  R  Y  *  R  H  S  E  F  S  W  N  L  P  F  H  V  S  C :   *  G  E  G  E  K  R  E  A  A  R  L  S  C  V  *  E  A  T  W  K  S  S  T  V  I  T  K  P  C  C  *  K   : V  L  *  D  Y  I  R  E  D  S  A  R  F  *  C  E  A  S  L  G  V  G  R  Y  F  E  L  S  V  *  L  A  G  L  Y  R  A  S  I  *  G  G  S  *  L  H  L  *  *  D  E  V  H  *  T  R  S  K  Y  A  K  Y  L  L  Q  S  S  G  L  Y  V  *  E  N   : G  *  I  P  Y  N  F  P  A  *  T  *  K  M  *  R  F  K  Y  F  F  A  V  I  P  Q  H  G  A  A  N  E  G  I  G  D  F  I  *  S  L  *  S  K  S  Y  Y  S  A  H  L  Q  K  *  S  *  F  F  F  L  L  C  A  S  P  P  *  F  Q  N  P  R  N  S  C  :  G  E  T  L  S  L  W  F  R  R  V  P  S  H  I  M  K  S  T  E  M  N  F  A  R  K  I  L  R :   Y  F  K  L  G  F  F  K  K  F  I  H  T  T  E  S  E  A  S  Y  L  Q  Y  C  I  I  E  P  S  I  N  E  :  V  R  S  L  A  I  S  C  V  N  H  G  G  Y  K  P  Q  P  F  P  L  V  A  L  S  K  L  L  M  M  K  :  E  W  D  V  A  S  F  </first_frame>
            <second_frame>  P  F  L  Y  *  D  G  V  A  R  S  S  F  C  R  S  A  S  E  S  R  R  R  A  M  A  G  R  S  Q  P  P  Y  R  P  R  P  N  F  S  S  S  S  S  R  S  Y  H  P  S  Q  P  S  R  N  F  Q  S  H  H  T  K  N  F  N  S  S  T  P  N  G  T  P  I  Q  N  N  A  S  D  N  K  T  S  S  S  N  W  D  K  V  I  D  E  D  I  D  D  I  Q  S  L  V  G  T  C  P  F  M  C  P   : V  E  E  R  E  K  R  E  R  L  R  D  L  A  V  F  E  R  L  H  G  N  P  R  Q  S  S  P  S  L  A  V  K  K  :  F  C  R  T  I  S  V  K  T  L  Q  D  S  D  V  R  P  L  S  V  L  E  D  T  L  N  Y  L  C  N  L  L  D  S  T  E  H  P  F  E  V  V  H  D  F  I  F  D  R  M  R  S  I  R  Q  D  L  S  M  Q  N  I  S  C  S  R  V  V  S  M  Y  E  R  M  :  V  K  F  H  I  I  S  Q  H  K  L  R  R  C  S  G  S  N  I  S  S  L  S  Y  L  N  M  E  Q  L  T  K  A  L  A  T  L  F  N  L  Y  E  A  N  R  T  T  A  P  I  F  K  N  E  A  D  F  F  S  F  Y  V  L  L  H  L  D  S  K  T  Q  G  T  V  A :   G  R  H  C  L  Y  G  F  V  A  F  L  L  T  L  *  S  R  Q  K  *  I  L  L  G  R  S  *   : D  T  L  N  W  A  S  S  R  N  L  F  I  Q  Q  S  P  R  H  R  T  C  S  I  A  L  L  N  L  L  S  M  R :   F  D  H  *  L  F  P  V  *  I  M  E  D  T  S  L  S  L  F  P  W  W  L  F  P  N  S  *  *  *  R :   N  G  M  *  H  L  S </second_frame>
            <third_frame>   H  F  Y  I  R  T  V  L  L  V  L  L  F  A  D  Q  P  V  K  V  D  A  E  P  W  P  E  G  V  N  L  R  T  G  Q  D  L  I  F  P  L  L  L  P  D  P  T  T  L  L  N  L  P  A  T  F  S  P  T  T  P  K  I  S  I  L  L  R  L  M  V  P  Q  F  R  T  T  L  P  T  T  R  R  A  Q  A  I  G  T  K  S  L  M  K  I  L  T  T  F  R  V  *  L  E  L  A  L  S  C  V  L  :  L  R  R  G  R  K  E  R  G  C  E  T  *  L  C  L  R  G  Y  M  E  I  L  D  S  H  H  Q  A  L  L  L  K  S :   S  V  G  L  Y  P  *  R  L  C  K  I  L  M  *  G  L  S  R  C  W  K  I  L  *  T  I  C  V  T  C  W  T  L  P  S  I  H  L  R  W  F  M  T  S  S  L  I  G  *  G  P  L  D  K  I  *  V  C  K  I  S  L  A  V  E  W  S  L  C  M  R  E  W :   L  N  S  I  *  F  P  S  I  N  L  E  D  V  A  V  Q  I  F  L  R  C  H  T  S  T  W  S  S  *  R  R  H  W  R  L  Y  L  I  F  M  K  Q  I  V  L  Q  R  P  S  S  K  M  K  L  I  F  F  P  F  M  C  F  S  T  L  I  P  K  P  K  E  Q  L   : R  G  D  T  V  F  M  V  S  S  R  S  F  S  H  Y  E  V  D  R  N  E  F  C  S  E  D  L  E  :  I  L  *  I  G  L  L  Q  E  I  Y  S  Y  N  R  V  R  G  I  V  L  A  V  L  H  Y  *  T  F  Y  Q  *   : G  S  I  T  S  Y  F  L  C  E  S  W  R  I  Q  A  S  A  F  S  L  G  G  S  F  Q  T  P  N  D  E   : G  M  G  C  S  I  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83040" stop="82722"/>
                    <exon start="82521" stop="82421"/>
                    <exon start="80547" stop="80326"/>
                    <exon start="79131" stop="78908"/>
                    <exon start="78786" stop="78738"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>912</number_coding_nucleotides>
                  <number_encoded_amino_acids>304</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DGVARSSFCRSASESRRRAMAGRSQPPYRPRPNFSSSSSRSYHPSQPSRNFQSHHTKNFNSSTPNGTPIQNNASDNKTSSSNWDKVIDEDIDDIQSLVGTCPFMCPVEEREKRERLRDLAVFERLHGNPRQSSPSLAVKKFCRTISVKTLQDSDVRPLSVLEDTLNYLCNLLDSTEHPFEVVHDFIFDRMRSIRQDLSMQNISCSRVVSMYERMVKFHIISQHKLRRCSGSNISSLSYLNMEQLTKALATLFNLYEANRTTAPIFKNEADFFSFYVLLHLDSKTQGTVAGRHCLYGFVAFLLTL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="83030" e_stop="82722"/>
            <exon e_start="82521" e_stop="82421"/>
            <exon e_start="80539" e_stop="80334"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.968" acc_prob="0.998" e_score="0.932"/>
          <exon-intron don_prob="0.999" acc_prob="0.992" e_score="0.950"/>
          <exon-only e_score="0.971"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.932">
            <gDNA_exon_boundary e_start="83030" e_stop="82722" e_length="309"/>
          </exon>
          <intron i_serial="1" don_prob="0.968" acc_prob="0.998">
            <gDNA_intron_boundary i_start="82721" i_stop="82522" i_length="200"/>
          </intron>
          <exon e_serial="2" e_score="0.950">
            <gDNA_exon_boundary e_start="82521" e_stop="82421" e_length="101"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.992">
            <gDNA_intron_boundary i_start="82420" i_stop="80540" i_length="1881"/>
          </intron>
          <exon e_serial="3" e_score="0.971">
            <gDNA_exon_boundary e_start="80539" e_stop="80334" e_length="206"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83030" stop="82722"/>
              <exon start="82521" stop="82421"/>
              <exon start="80539" stop="80334"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E468661" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTCGTTCTTCTTTTTGCCGATCAGCCAGTGAAAGTAGACGCCGAGCCATGGCCGGAAGGAGTCAACCTCCGTACAGGCCAAGACCTAATTTTTCCTCTTCTTCTTCCAGATCCTACCACCCTTCTCAACCTTCCCGCAACTTTCAGTCCCACCACACCAAAAATTTCAATTCTTCTACGCCTAATGGTACCCCAATTCAGAACAACGCTTCCGACAACAAGACGAGCTCAAGCAATTGGGACAAAGTCATTGATGAAGATATTGACGACATTCAGAGTTTAGTTGGAACTTGCCCTTTCATGTGTCCTG : TTGAGGAGAGGGAGAAAAGAGAGAGGCTGCGAGACTTAGCTGTGTTTGAGAGGCTACATGGAAATCCTCGACAGTCATCACCAAGCCTTGCTGTTAAAAAG : GACTATATCCGTGAAGACTCTGCAAGATTCTGATGTGAGGCCTCTCTCGGTGTTGGAAGATACTTTGAACTATCTGTGTAACTTGCTGGACTCTACCGAGCATCCATTTGAGGTGGTTCATGACTTCATCTTTGATAGGATGAGGTCCATTAGACAAGATCTAAGTATGCAAAATATCTCTTGCAGTCGAGTGGTCTCTATGTATG</gDNA_template>
            <first_frame> L  V  L  L  F  A  D  Q  P  V  K  V  D  A  E  P  W  P  E  G  V  N  L  R  T  G  Q  D  L  I  F  P  L  L  L  P  D  P  T  T  L  L  N  L  P  A  T  F  S  P  T  T  P  K  I  S  I  L  L  R  L  M  V  P  Q  F  R  T  T  L  P  T  T  R  R  A  Q  A  I  G  T  K  S  L  M  K  I  L  T  T  F  R  V  *  L  E  L  A  L  S  C  V  L  :  L  R  R  G  R  K  E  R  G  C  E  T  *  L  C  L  R  G  Y  M  E  I  L  D  S  H  H  Q  A  L  L  L  K  R :   T  I  S  V  K  T  L  Q  D  S  D  V  R  P  L  S  V  L  E  D  T  L  N  Y  L  C  N  L  L  D  S  T  E  H  P  F  E  V  V  H  D  F  I  F  D  R  M  R  S  I  R  Q  D  L  S  M  Q  N  I  S  C  S  R  V  V  S  M  Y  </first_frame>
            <second_frame>  S  F  F  F  L  P  I  S  Q  *  K  *  T  P  S  H  G  R  K  E  S  T  S  V  Q  A  K  T  *  F  F  L  F  F  F  Q  I  L  P  P  F  S  T  F  P  Q  L  S  V  P  P  H  Q  K  F  Q  F  F  Y  A  *  W  Y  P  N  S  E  Q  R  F  R  Q  Q  D  E  L  K  Q  L  G  Q  S  H  *  *  R  Y  *  R  H  S  E  F  S  W  N  L  P  F  H  V  S  C :   *  G  E  G  E  K  R  E  A  A  R  L  S  C  V  *  E  A  T  W  K  S  S  T  V  I  T  K  P  C  C  *  K   : G  L  Y  P  *  R  L  C  K  I  L  M  *  G  L  S  R  C  W  K  I  L  *  T  I  C  V  T  C  W  T  L  P  S  I  H  L  R  W  F  M  T  S  S  L  I  G  *  G  P  L  D  K  I  *  V  C  K  I  S  L  A  V  E  W  S  L  C  M </second_frame>
            <third_frame>   R  S  S  F  C  R  S  A  S  E  S  R  R  R  A  M  A  G  R  S  Q  P  P  Y  R  P  R  P  N  F  S  S  S  S  S  R  S  Y  H  P  S  Q  P  S  R  N  F  Q  S  H  H  T  K  N  F  N  S  S  T  P  N  G  T  P  I  Q  N  N  A  S  D  N  K  T  S  S  S  N  W  D  K  V  I  D  E  D  I  D  D  I  Q  S  L  V  G  T  C  P  F  M  C  P   : V  E  E  R  E  K  R  E  R  L  R  D  L  A  V  F  E  R  L  H  G  N  P  R  Q  S  S  P  S  L  A  V  K  K  :  D  Y  I  R  E  D  S  A  R  F  *  C  E  A  S  L  G  V  G  R  Y  F  E  L  S  V  *  L  A  G  L  Y  R  A  S  I  *  G  G  S  *  L  H  L  *  *  D  E  V  H  *  T  R  S  K  Y  A  K  Y  L  L  Q  S  S  G  L  Y  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83028" stop="82722"/>
                    <exon start="82521" stop="82421"/>
                    <exon start="80539" stop="80507"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>438</number_coding_nucleotides>
                  <number_encoded_amino_acids>146</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSSFCRSASESRRRAMAGRSQPPYRPRPNFSSSSSRSYHPSQPSRNFQSHHTKNFNSSTPNGTPIQNNASDNKTSSSNWDKVIDEDIDDIQSLVGTCPFMCPVEEREKRERLRDLAVFERLHGNPRQSSPSLAVKKDYIREDSARF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="86481" PGL_stop="90615"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="86481" e_stop="86548"/>
            <exon e_start="88764" e_stop="89152"/>
            <exon e_start="89886" e_stop="90615"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="86481" e_stop="86548" e_length="68"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="86549" i_stop="88763" i_length="2215"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="88764" e_stop="89152" e_length="389"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="89153" i_stop="89885" i_length="733"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="89886" e_stop="90615" e_length="730"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86481" stop="86548"/>
              <exon start="88764" stop="89152"/>
              <exon start="89886" stop="89913"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333444" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86488" stop="86548"/>
              <exon start="88764" stop="89152"/>
              <exon start="89886" stop="90061"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393888" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86489" stop="86548"/>
              <exon start="88764" stop="89152"/>
              <exon start="89886" stop="89982"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202247" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86513" stop="86548"/>
              <exon start="88764" stop="89152"/>
              <exon start="89886" stop="89974"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311831" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86515" stop="86548"/>
              <exon start="88764" stop="89118"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335633" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88779" stop="89152"/>
              <exon start="89886" stop="89982"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259252" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88790" stop="89152"/>
              <exon start="89886" stop="90048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247591" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88991" stop="89152"/>
              <exon start="89886" stop="90516"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704377" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90085" stop="90564"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351520" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90153" stop="90615"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352134" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90186" stop="90527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351453" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90186" stop="90527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354445" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTCACGTTGCCTAATTTGGTGCTGCTTGAGATCTGCTTCAATCTCTCCCATTTCCATCTTCTTACAG : ATGGATATAGTGAAGGATTTAACCGCTGGTACTGTTGGAGGAGCAGCACAATTGATAGTTGGGCACCCTTTTGATACCATCAAAGTCAAGCTCCAAAGCCAGCCTACTCCACTTCCAGGGCAACCTCCTAAGTATGCAGGGGCCATAGATGCTGTCAGGAAAACAGTGGCCTCTGAAGGTCCAAGGGGGTTATACAAAGGCATGGGAGCTCCACTTGCCACTGTAGCCGCCTTCAACGCTTTGCTTTTCACTGTTAGAGGTCAAACTGAGGCCCTGTTAAGGTCTGAACCGGGAGCTCCTCTTACTGTCAAGCAACAAATCCTTTGTGGGGCTGTTGCTGGAACTGCTGCATCATTTCTTGCCTGCCCGACTGAACTCATAAAATGCAG : GTTGCAAGCGCACAGCGCATTGGCAAGTGTAGGATCAGCCTCTGCGGCCATAAAGTATACAGGGCCAATGGATGTTGCAAGACACGTTCTCCGTTCAGAAGGAGGTGTAAGGGGTCTCTTCAAGGGTATGTGCCCCACCCTGGCACGAGAAGTACCGGGAAATGCTGTTATGTTTGGTGTATATGAAGCGTTAAAGCAGTACTTTGCAGGAGGGATGGATACTTCTGGGCTAGGAAGGGGTTCTCTTATAGTAGCTGGAGGCTTGGCTGGTGGTTCAGTCTGGTTTGCAGTGTATCCGACAGATGTTATTAAGAGCGTAATTCAAGTTGATGATTATAGAAACGCGAAATACTCTGGCTCTTTTGATGCTCTTAAAAAGATTTTGGCCTCAGAAGGTGTCAAAGGCCTTTACAAGGGGTTTGGACCTGCTATAACGCGTAGCATCCCAGCAAATGCAGCTTGCTTCTTGGCATATGAGATGACTAGGTCTAGTTTGGGATAATTGCTCCAATGTTTTAGGACAATTGTGTTCTCAAAATTTTTTACAATATCATTGTTTCAAGATTAAGAAGGAAAATTTTGTGAGCCTAGTTCTGTTATCATACAAAGCCAAAATAGGAATATGTTATCACAATAGTTCCCAATCTCTGTTTTCATCTTCAGTGTCTATTTGTTTTTTGTTGTTGTTATGTCAGATGGATTAAAAATCAAGGAGATGGTAAATTTCATT</gDNA_template>
            <first_frame> S  H  V  A  *  F  G  A  A  *  D  L  L  Q  S  L  P  F  P  S  S  Y  R :   W  I  *  *  R  I  *  P  L  V  L  L  E  E  Q  H  N  *  *  L  G  T  L  L  I  P  S  K  S  S  S  K  A  S  L  L  H  F  Q  G  N  L  L  S  M  Q  G  P  *  M  L  S  G  K  Q  W  P  L  K  V  Q  G  G  Y  T  K  A  W  E  L  H  L  P  L  *  P  P  S  T  L  C  F  S  L  L  E  V  K  L  R  P  C  *  G  L  N  R  E  L  L  L  L  S  S  N  K  S  F  V  G  L  L  L  E  L  L  H  H  F  L  P  A  R  L  N  S  *  N  A   : G  C  K  R  T  A  H  W  Q  V  *  D  Q  P  L  R  P  *  S  I  Q  G  Q  W  M  L  Q  D  T  F  S  V  Q  K  E  V  *  G  V  S  S  R  V  C  A  P  P  W  H  E  K  Y  R  E  M  L  L  C  L  V  Y  M  K  R  *  S  S  T  L  Q  E  G  W  I  L  L  G  *  E  G  V  L  L  *  *  L  E  A  W  L  V  V  Q  S  G  L  Q  C  I  R  Q  M  L  L  R  A  *  F  K  L  M  I  I  E  T  R  N  T  L  A  L  L  M  L  L  K  R  F  W  P  Q  K  V  S  K  A  F  T  R  G  L  D  L  L  *  R  V  A  S  Q  Q  M  Q  L  A  S  W  H  M  R  *  L  G  L  V  W  D  N  C  S  N  V  L  G  Q  L  C  S  Q  N  F  L  Q  Y  H  C  F  K  I  K  K  E  N  F  V  S  L  V  L  L  S  Y  K  A  K  I  G  I  C  Y  H  N  S  S  Q  S  L  F  S  S  S  V  S  I  C  F  L  L  L  L  C  Q  M  D  *  K  S  R  R  W  *  I  S   </first_frame>
            <second_frame>  L  T  L  P  N  L  V  L  L  E  I  C  F  N  L  S  H  F  H  L  L  T   : D  G  Y  S  E  G  F  N  R  W  Y  C  W  R  S  S  T  I  D  S  W  A  P  F  *  Y  H  Q  S  Q  A  P  K  P  A  Y  S  T  S  R  A  T  S  *  V  C  R  G  H  R  C  C  Q  E  N  S  G  L  *  R  S  K  G  V  I  Q  R  H  G  S  S  T  C  H  C  S  R  L  Q  R  F  A  F  H  C  *  R  S  N  *  G  P  V  K  V  *  T  G  S  S  S  Y  C  Q  A  T  N  P  L  W  G  C  C  W  N  C  C  I  I  S  C  L  P  D  *  T  H  K  M  Q  :  V  A  S  A  Q  R  I  G  K  C  R  I  S  L  C  G  H  K  V  Y  R  A  N  G  C  C  K  T  R  S  P  F  R  R  R  C  K  G  S  L  Q  G  Y  V  P  H  P  G  T  R  S  T  G  K  C  C  Y  V  W  C  I  *  S  V  K  A  V  L  C  R  R  D  G  Y  F  W  A  R  K  G  F  S  Y  S  S  W  R  L  G  W  W  F  S  L  V  C  S  V  S  D  R  C  Y  *  E  R  N  S  S  *  *  L  *  K  R  E  I  L  W  L  F  *  C  S  *  K  D  F  G  L  R  R  C  Q  R  P  L  Q  G  V  W  T  C  Y  N  A  *  H  P  S  K  C  S  L  L  L  G  I  *  D  D  *  V  *  F  G  I  I  A  P  M  F  *  D  N  C  V  L  K  I  F  Y  N  I  I  V  S  R  L  R  R  K  I  L  *  A  *  F  C  Y  H  T  K  P  K  *  E  Y  V  I  T  I  V  P  N  L  C  F  H  L  Q  C  L  F  V  F  C  C  C  Y  V  R  W  I  K  N  Q  G  D  G  K  F  H  </second_frame>
            <third_frame>   S  R  C  L  I  W  C  C  L  R  S  A  S  I  S  P  I  S  I  F  L  Q  :  M  D  I  V  K  D  L  T  A  G  T  V  G  G  A  A  Q  L  I  V  G  H  P  F  D  T  I  K  V  K  L  Q  S  Q  P  T  P  L  P  G  Q  P  P  K  Y  A  G  A  I  D  A  V  R  K  T  V  A  S  E  G  P  R  G  L  Y  K  G  M  G  A  P  L  A  T  V  A  A  F  N  A  L  L  F  T  V  R  G  Q  T  E  A  L  L  R  S  E  P  G  A  P  L  T  V  K  Q  Q  I  L  C  G  A  V  A  G  T  A  A  S  F  L  A  C  P  T  E  L  I  K  C  R :   L  Q  A  H  S  A  L  A  S  V  G  S  A  S  A  A  I  K  Y  T  G  P  M  D  V  A  R  H  V  L  R  S  E  G  G  V  R  G  L  F  K  G  M  C  P  T  L  A  R  E  V  P  G  N  A  V  M  F  G  V  Y  E  A  L  K  Q  Y  F  A  G  G  M  D  T  S  G  L  G  R  G  S  L  I  V  A  G  G  L  A  G  G  S  V  W  F  A  V  Y  P  T  D  V  I  K  S  V  I  Q  V  D  D  Y  R  N  A  K  Y  S  G  S  F  D  A  L  K  K  I  L  A  S  E  G  V  K  G  L  Y  K  G  F  G  P  A  I  T  R  S  I  P  A  N  A  A  C  F  L  A  Y  E  M  T  R  S  S  L  G  *  L  L  Q  C  F  R  T  I  V  F  S  K  F  F  T  I  S  L  F  Q  D  *  E  G  K  F  C  E  P  S  S  V  I  I  Q  S  Q  N  R  N  M  L  S  Q  *  F  P  I  S  V  F  I  F  S  V  Y  L  F  F  V  V  V  M  S  D  G  L  K  I  K  E  M  V  N  F  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="86483" stop="86548"/>
                    <exon start="88764" stop="89152"/>
                    <exon start="89886" stop="90387"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>954</number_coding_nucleotides>
                  <number_encoded_amino_acids>318</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SRCLIWCCLRSASISPISIFLQMDIVKDLTAGTVGGAAQLIVGHPFDTIKVKLQSQPTPLPGQPPKYAGAIDAVRKTVASEGPRGLYKGMGAPLATVAAFNALLFTVRGQTEALLRSEPGAPLTVKQQILCGAVAGTAASFLACPTELIKCRLQAHSALASVGSASAAIKYTGPMDVARHVLRSEGGVRGLFKGMCPTLAREVPGNAVMFGVYEALKQYFAGGMDTSGLGRGSLIVAGGLAGGSVWFAVYPTDVIKSVIQVDDYRNAKYSGSFDALKKILASEGVKGLYKGFGPAITRSIPANAACFLAYEMTRSSLG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90368" stop="90589"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LGLVWDNCSNVLGQLCSQNFLQYHCFKIKKENFVSLVLLSYKAKIGICYHNSSQSLFSSSVSICFLLLLCQMD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="88756" e_stop="89152"/>
            <exon e_start="89886" e_stop="90615"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="88756" e_stop="89152" e_length="397"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="89153" i_stop="89885" i_length="733"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="89886" e_stop="90615" e_length="730"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88756" stop="89152"/>
              <exon start="89886" stop="90079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E263150" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88779" stop="89152"/>
              <exon start="89886" stop="89982"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259252" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88790" stop="89152"/>
              <exon start="89886" stop="90048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247591" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88991" stop="89152"/>
              <exon start="89886" stop="90516"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704377" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90085" stop="90564"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351520" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90153" stop="90615"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352134" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90186" stop="90527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351453" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90186" stop="90527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354445" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTTCCAGATGGATATAGTGAAGGATTTAACCGCTGGTACTGTTGGAGGAGCAGCACAATTGATAGTTGGGCACCCTTTTGATACCATCAAAGTCAAGCTCCAAAGCCAGCCTACTCCACTTCCAGGGCAACCTCCTAAGTATGCAGGGGCCATAGATGCTGTCAGGAAAACAGTGGCCTCTGAAGGTCCAAGGGGGTTATACAAAGGCATGGGAGCTCCACTTGCCACTGTAGCCGCCTTCAACGCTTTGCTTTTCACTGTTAGAGGTCAAACTGAGGCCCTGTTAAGGTCTGAACCGGGAGCTCCTCTTACTGTCAAGCAACAAATCCTTTGTGGGGCTGTTGCTGGAACTGCTGCATCATTTCTTGCCTGCCCGACTGAACTCATAAAATGCAG : GTTGCAAGCGCACAGCGCATTGGCAAGTGTAGGATCAGCCTCTGCGGCCATAAAGTATACAGGGCCAATGGATGTTGCAAGACACGTTCTCCGTTCAGAAGGAGGTGTAAGGGGTCTCTTCAAGGGTATGTGCCCCACCCTGGCACGAGAAGTACCGGGAAATGCTGTTATGTTTGGTGTATATGAAGCGTTAAAGCAGTACTTTGCAGGAGGGATGGATACTTCTGGGCTAGGAAGGGGTTCTCTTATAGTAGCTGGAGGCTTGGCTGGTGGTTCAGTCTGGTTTGCAGTGTATCCGACAGATGTTATTAAGAGCGTAATTCAAGTTGATGATTATAGAAACGCGAAATACTCTGGCTCTTTTGATGCTCTTAAAAAGATTTTGGCCTCAGAAGGTGTCAAAGGCCTTTACAAGGGGTTTGGACCTGCTATAACGCGTAGCATCCCAGCAAATGCAGCTTGCTTCTTGGCATATGAGATGACTAGGTCTAGTTTGGGATAATTGCTCCAATGTTTTAGGACAATTGTGTTCTCAAAATTTTTTACAATATCATTGTTTCAAGATTAAGAAGGAAAATTTTGTGAGCCTAGTTCTGTTATCATACAAAGCCAAAATAGGAATATGTTATCACAATAGTTCCCAATCTCTGTTTTCATCTTCAGTGTCTATTTGTTTTTTGTTGTTGTTATGTCAGATGGATTAAAAATCAAGGAGATGGTAAATTTCATT</gDNA_template>
            <first_frame> C  S  R  W  I  *  *  R  I  *  P  L  V  L  L  E  E  Q  H  N  *  *  L  G  T  L  L  I  P  S  K  S  S  S  K  A  S  L  L  H  F  Q  G  N  L  L  S  M  Q  G  P  *  M  L  S  G  K  Q  W  P  L  K  V  Q  G  G  Y  T  K  A  W  E  L  H  L  P  L  *  P  P  S  T  L  C  F  S  L  L  E  V  K  L  R  P  C  *  G  L  N  R  E  L  L  L  L  S  S  N  K  S  F  V  G  L  L  L  E  L  L  H  H  F  L  P  A  R  L  N  S  *  N  A   : G  C  K  R  T  A  H  W  Q  V  *  D  Q  P  L  R  P  *  S  I  Q  G  Q  W  M  L  Q  D  T  F  S  V  Q  K  E  V  *  G  V  S  S  R  V  C  A  P  P  W  H  E  K  Y  R  E  M  L  L  C  L  V  Y  M  K  R  *  S  S  T  L  Q  E  G  W  I  L  L  G  *  E  G  V  L  L  *  *  L  E  A  W  L  V  V  Q  S  G  L  Q  C  I  R  Q  M  L  L  R  A  *  F  K  L  M  I  I  E  T  R  N  T  L  A  L  L  M  L  L  K  R  F  W  P  Q  K  V  S  K  A  F  T  R  G  L  D  L  L  *  R  V  A  S  Q  Q  M  Q  L  A  S  W  H  M  R  *  L  G  L  V  W  D  N  C  S  N  V  L  G  Q  L  C  S  Q  N  F  L  Q  Y  H  C  F  K  I  K  K  E  N  F  V  S  L  V  L  L  S  Y  K  A  K  I  G  I  C  Y  H  N  S  S  Q  S  L  F  S  S  S  V  S  I  C  F  L  L  L  L  C  Q  M  D  *  K  S  R  R  W  *  I  S   </first_frame>
            <second_frame>  V  P  D  G  Y  S  E  G  F  N  R  W  Y  C  W  R  S  S  T  I  D  S  W  A  P  F  *  Y  H  Q  S  Q  A  P  K  P  A  Y  S  T  S  R  A  T  S  *  V  C  R  G  H  R  C  C  Q  E  N  S  G  L  *  R  S  K  G  V  I  Q  R  H  G  S  S  T  C  H  C  S  R  L  Q  R  F  A  F  H  C  *  R  S  N  *  G  P  V  K  V  *  T  G  S  S  S  Y  C  Q  A  T  N  P  L  W  G  C  C  W  N  C  C  I  I  S  C  L  P  D  *  T  H  K  M  Q  :  V  A  S  A  Q  R  I  G  K  C  R  I  S  L  C  G  H  K  V  Y  R  A  N  G  C  C  K  T  R  S  P  F  R  R  R  C  K  G  S  L  Q  G  Y  V  P  H  P  G  T  R  S  T  G  K  C  C  Y  V  W  C  I  *  S  V  K  A  V  L  C  R  R  D  G  Y  F  W  A  R  K  G  F  S  Y  S  S  W  R  L  G  W  W  F  S  L  V  C  S  V  S  D  R  C  Y  *  E  R  N  S  S  *  *  L  *  K  R  E  I  L  W  L  F  *  C  S  *  K  D  F  G  L  R  R  C  Q  R  P  L  Q  G  V  W  T  C  Y  N  A  *  H  P  S  K  C  S  L  L  L  G  I  *  D  D  *  V  *  F  G  I  I  A  P  M  F  *  D  N  C  V  L  K  I  F  Y  N  I  I  V  S  R  L  R  R  K  I  L  *  A  *  F  C  Y  H  T  K  P  K  *  E  Y  V  I  T  I  V  P  N  L  C  F  H  L  Q  C  L  F  V  F  C  C  C  Y  V  R  W  I  K  N  Q  G  D  G  K  F  H  </second_frame>
            <third_frame>   F  Q  M  D  I  V  K  D  L  T  A  G  T  V  G  G  A  A  Q  L  I  V  G  H  P  F  D  T  I  K  V  K  L  Q  S  Q  P  T  P  L  P  G  Q  P  P  K  Y  A  G  A  I  D  A  V  R  K  T  V  A  S  E  G  P  R  G  L  Y  K  G  M  G  A  P  L  A  T  V  A  A  F  N  A  L  L  F  T  V  R  G  Q  T  E  A  L  L  R  S  E  P  G  A  P  L  T  V  K  Q  Q  I  L  C  G  A  V  A  G  T  A  A  S  F  L  A  C  P  T  E  L  I  K  C  R :   L  Q  A  H  S  A  L  A  S  V  G  S  A  S  A  A  I  K  Y  T  G  P  M  D  V  A  R  H  V  L  R  S  E  G  G  V  R  G  L  F  K  G  M  C  P  T  L  A  R  E  V  P  G  N  A  V  M  F  G  V  Y  E  A  L  K  Q  Y  F  A  G  G  M  D  T  S  G  L  G  R  G  S  L  I  V  A  G  G  L  A  G  G  S  V  W  F  A  V  Y  P  T  D  V  I  K  S  V  I  Q  V  D  D  Y  R  N  A  K  Y  S  G  S  F  D  A  L  K  K  I  L  A  S  E  G  V  K  G  L  Y  K  G  F  G  P  A  I  T  R  S  I  P  A  N  A  A  C  F  L  A  Y  E  M  T  R  S  S  L  G  *  L  L  Q  C  F  R  T  I  V  F  S  K  F  F  T  I  S  L  F  Q  D  *  E  G  K  F  C  E  P  S  S  V  I  I  Q  S  Q  N  R  N  M  L  S  Q  *  F  P  I  S  V  F  I  F  S  V  Y  L  F  F  V  V  V  M  S  D  G  L  K  I  K  E  M  V  N  F  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88758" stop="89152"/>
                    <exon start="89886" stop="90387"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>894</number_coding_nucleotides>
                  <number_encoded_amino_acids>298</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FQMDIVKDLTAGTVGGAAQLIVGHPFDTIKVKLQSQPTPLPGQPPKYAGAIDAVRKTVASEGPRGLYKGMGAPLATVAAFNALLFTVRGQTEALLRSEPGAPLTVKQQILCGAVAGTAASFLACPTELIKCRLQAHSALASVGSASAAIKYTGPMDVARHVLRSEGGVRGLFKGMCPTLAREVPGNAVMFGVYEALKQYFAGGMDTSGLGRGSLIVAGGLAGGSVWFAVYPTDVIKSVIQVDDYRNAKYSGSFDALKKILASEGVKGLYKGFGPAITRSIPANAACFLAYEMTRSSLG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90368" stop="90589"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LGLVWDNCSNVLGQLCSQNFLQYHCFKIKKENFVSLVLLSYKAKIGICYHNSSQSLFSSSVSICFLLLLCQMD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="94080" PGL_stop="95077"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="94080" e_stop="95077"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="94080" e_stop="95077" e_length="998"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94080" stop="94865"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623249" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94082" stop="94889"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548588" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94083" stop="94595"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299420" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94089" stop="94881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706141" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94155" stop="94814"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461346" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94155" stop="94650"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E435113" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94168" stop="94716"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286327" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94329" stop="95077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541672" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTTGCCCATTTTGCTTGCCTCTTCTCTTTGTCTGATGGAGCAATCCGATAACTCAACGACCCACGTTCATCAGGAAGCAGAAGAAGAACCGAACCCGACCCATCAGTTCATGCTTCCTCCCGGTTTGACACCGGAAGAATCCGATGAGCTCAAATCAAGTGTAACCGACTTCCACTCCTACCAAGTCAACTCATCCCAATGTTCTTCTCTACTCGCACAACGCATCCACGCGCCGCCTCACGTCGTCTGGCCCGTCGTCCGTCGTTTCGAAAAGCCTCAGATATACAAGCACTTCATCAAAAGCTGTTCCGTCGCAGAGAATTTCTCCATGGTCGTGGGGGCCACGCGCGATGTCAACGTCATCTCCGGTTTACCGGCGAATACAAGCACGGAGAGGCTCGATTTATTGGACGACGAAAAGTACGTCACCGGTTTCAGTATAATTGGTGGTGAACATAGATTGAAGAATTACCGGTCAGTTACTAGTGTACATGGATTCGAACGCCATGGGAGAATCTGGACCGTTGTTTTGGAATCGTACGTCGTTGATGTGCCTGAAGGGAATACTGAAGAAGACACTCGTCTTTTTGCTGATACAGTTGTCAAATTGAATCTTCAAAAATTAGCCTCCGTCGCCGAAGCCATAGCTCTTGGTGGTAACGGTGAGATCTCATAAAATTTGAAGTTTGATTTATTTCTCTTCATCTTAATTTTCTTTTTTCTTTTCCACGGGCTAAAATCATGGAAAAATATTGTGTTTCTAAAAAAGTTCATGGAAGATAATCAGAACATATCCTTCACACGTAATTAGATTAATTATTCGTCTGGTTGTGTACTGGGTCGAGCTGATGTAAAGAATGAGGAAATGATATAAGATGAAGATGTTGTATTTCTGTAATTTTATTTTATGAAAAGAACAAAAAGAAATCGTTTTAACTTTTTTCAATTATGGGATCATTGATTAAGTTGAAATGAGAAGTTTATGTTAGATTAGTA</gDNA_template>
            <first_frame> F  L  P  I  L  L  A  S  S  L  C  L  M  E  Q  S  D  N  S  T  T  H  V  H  Q  E  A  E  E  E  P  N  P  T  H  Q  F  M  L  P  P  G  L  T  P  E  E  S  D  E  L  K  S  S  V  T  D  F  H  S  Y  Q  V  N  S  S  Q  C  S  S  L  L  A  Q  R  I  H  A  P  P  H  V  V  W  P  V  V  R  R  F  E  K  P  Q  I  Y  K  H  F  I  K  S  C  S  V  A  E  N  F  S  M  V  V  G  A  T  R  D  V  N  V  I  S  G  L  P  A  N  T  S  T  E  R  L  D  L  L  D  D  E  K  Y  V  T  G  F  S  I  I  G  G  E  H  R  L  K  N  Y  R  S  V  T  S  V  H  G  F  E  R  H  G  R  I  W  T  V  V  L  E  S  Y  V  V  D  V  P  E  G  N  T  E  E  D  T  R  L  F  A  D  T  V  V  K  L  N  L  Q  K  L  A  S  V  A  E  A  I  A  L  G  G  N  G  E  I  S  *  N  L  K  F  D  L  F  L  F  I  L  I  F  F  F  L  F  H  G  L  K  S  W  K  N  I  V  F  L  K  K  F  M  E  D  N  Q  N  I  S  F  T  R  N  *  I  N  Y  S  S  G  C  V  L  G  R  A  D  V  K  N  E  E  M  I  *  D  E  D  V  V  F  L  *  F  Y  F  M  K  R  T  K  R  N  R  F  N  F  F  Q  L  W  D  H  *  L  S  *  N  E  K  F  M  L  D  *   </first_frame>
            <second_frame>  F  C  P  F  C  L  P  L  L  F  V  *  W  S  N  P  I  T  Q  R  P  T  F  I  R  K  Q  K  K  N  R  T  R  P  I  S  S  C  F  L  P  V  *  H  R  K  N  P  M  S  S  N  Q  V  *  P  T  S  T  P  T  K  S  T  H  P  N  V  L  L  Y  S  H  N  A  S  T  R  R  L  T  S  S  G  P  S  S  V  V  S  K  S  L  R  Y  T  S  T  S  S  K  A  V  P  S  Q  R  I  S  P  W  S  W  G  P  R  A  M  S  T  S  S  P  V  Y  R  R  I  Q  A  R  R  G  S  I  Y  W  T  T  K  S  T  S  P  V  S  V  *  L  V  V  N  I  D  *  R  I  T  G  Q  L  L  V  Y  M  D  S  N  A  M  G  E  S  G  P  L  F  W  N  R  T  S  L  M  C  L  K  G  I  L  K  K  T  L  V  F  L  L  I  Q  L  S  N  *  I  F  K  N  *  P  P  S  P  K  P  *  L  L  V  V  T  V  R  S  H  K  I  *  S  L  I  Y  F  S  S  S  *  F  S  F  F  F  S  T  G  *  N  H  G  K  I  L  C  F  *  K  S  S  W  K  I  I  R  T  Y  P  S  H  V  I  R  L  I  I  R  L  V  V  Y  W  V  E  L  M  *  R  M  R  K  *  Y  K  M  K  M  L  Y  F  C  N  F  I  L  *  K  E  Q  K  E  I  V  L  T  F  F  N  Y  G  I  I  D  *  V  E  M  R  S  L  C  *  I  S  </second_frame>
            <third_frame>   F  A  H  F  A  C  L  F  S  L  S  D  G  A  I  R  *  L  N  D  P  R  S  S  G  S  R  R  R  T  E  P  D  P  S  V  H  A  S  S  R  F  D  T  G  R  I  R  *  A  Q  I  K  C  N  R  L  P  L  L  P  S  Q  L  I  P  M  F  F  S  T  R  T  T  H  P  R  A  A  S  R  R  L  A  R  R  P  S  F  R  K  A  S  D  I  Q  A  L  H  Q  K  L  F  R  R  R  E  F  L  H  G  R  G  G  H  A  R  C  Q  R  H  L  R  F  T  G  E  Y  K  H  G  E  A  R  F  I  G  R  R  K  V  R  H  R  F  Q  Y  N  W  W  *  T  *  I  E  E  L  P  V  S  Y  *  C  T  W  I  R  T  P  W  E  N  L  D  R  C  F  G  I  V  R  R  *  C  A  *  R  E  Y  *  R  R  H  S  S  F  C  *  Y  S  C  Q  I  E  S  S  K  I  S  L  R  R  R  S  H  S  S  W  W  *  R  *  D  L  I  K  F  E  V  *  F  I  S  L  H  L  N  F  L  F  S  F  P  R  A  K  I  M  E  K  Y  C  V  S  K  K  V  H  G  R  *  S  E  H  I  L  H  T  *  L  D  *  L  F  V  W  L  C  T  G  S  S  *  C  K  E  *  G  N  D  I  R  *  R  C  C  I  S  V  I  L  F  Y  E  K  N  K  K  K  S  F  *  L  F  S  I  M  G  S  L  I  K  L  K  *  E  V  Y  V  R  L  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0024F02.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94080" stop="94757"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>675</number_coding_nucleotides>
                  <number_encoded_amino_acids>225</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLPILLASSLCLMEQSDNSTTHVHQEAEEEPNPTHQFMLPPGLTPEESDELKSSVTDFHSYQVNSSQCSSLLAQRIHAPPHVVWPVVRRFEKPQIYKHFIKSCSVAENFSMVVGATRDVNVISGLPANTSTERLDLLDDEKYVTGFSIIGGEHRLKNYRSVTSVHGFERHGRIWTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLASVAEAIALGGNGEIS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="96476" PGL_stop="95849"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="96476" e_stop="95849"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="96476" e_stop="95849" e_length="628"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96476" stop="95849"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353601" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGCCACACATCTTTTGTATTCCTCTCTTTACTCTTGTAAATTTGTACTTTTAAGTCAAATAAATTTTCAGCTGTTCTTGTTATCTGCTTTTGAAGATCTACTTAAGGTATTATTATTATTATTTGAAAATTATTTTTATTCTCGTCTAGCCTAAATGATAGGCTAAACACTTACTGACAGATTAATATCAACCTAAACTATTGACAACATGGAACTTGGACTGTTCTGGTGTTTCTAAGGTCGAAATAGTGTAGTTGGAGAGTGGGAAGATCTTGGCTTAGTATGGAGTTCCTGTTAAGGCCTATGTTAAGCCATGTGTGAGGCGTTGTTTGAGCTATGTTGAAACCGTAAAAGACCCTTTCATTCTCGGACTATCTAACTCATAAACGAACCGATAGTTACATCTAAGCGATCCTATCGTATTTGATTCCAAATGTTGAGATTTGTAAGGCTATGCGGACTAGCGCCAGCTTTGGAACTTGAGAATGTATATTACTTATTATTATTATTATTATTATTTATAAACAATTTGTGATAGTAAAGAAATATGTGAATGATAGCAAAATATAATTACTTATGGATGTAAAATATAAATTAATTTTGTTTCATTTTTTTAAGTAAAAAAATC</gDNA_template>
            <first_frame> S  H  T  S  F  V  F  L  S  L  L  L  *  I  C  T  F  K  S  N  K  F  S  A  V  L  V  I  C  F  *  R  S  T  *  G  I  I  I  I  I  *  K  L  F  L  F  S  S  S  L  N  D  R  L  N  T  Y  *  Q  I  N  I  N  L  N  Y  *  Q  H  G  T  W  T  V  L  V  F  L  R  S  K  *  C  S  W  R  V  G  R  S  W  L  S  M  E  F  L  L  R  P  M  L  S  H  V  *  G  V  V  *  A  M  L  K  P  *  K  T  L  S  F  S  D  Y  L  T  H  K  R  T  D  S  Y  I  *  A  I  L  S  Y  L  I  P  N  V  E  I  C  K  A  M  R  T  S  A  S  F  G  T  *  E  C  I  L  L  I  I  I  I  I  I  I  Y  K  Q  F  V  I  V  K  K  Y  V  N  D  S  K  I  *  L  L  M  D  V  K  Y  K  L  I  L  F  H  F  F  K  *  K  N  </first_frame>
            <second_frame>  A  T  H  L  L  Y  S  S  L  Y  S  C  K  F  V  L  L  S  Q  I  N  F  Q  L  F  L  L  S  A  F  E  D  L  L  K  V  L  L  L  L  F  E  N  Y  F  Y  S  R  L  A  *  M  I  G  *  T  L  T  D  R  L  I  S  T  *  T  I  D  N  M  E  L  G  L  F  W  C  F  *  G  R  N  S  V  V  G  E  W  E  D  L  G  L  V  W  S  S  C  *  G  L  C  *  A  M  C  E  A  L  F  E  L  C  *  N  R  K  R  P  F  H  S  R  T  I  *  L  I  N  E  P  I  V  T  S  K  R  S  Y  R  I  *  F  Q  M  L  R  F  V  R  L  C  G  L  A  P  A  L  E  L  E  N  V  Y  Y  L  L  L  L  L  L  L  F  I  N  N  L  *  *  *  R  N  M  *  M  I  A  K  Y  N  Y  L  W  M  *  N  I  N  *  F  C  F  I  F  L  S  K  K  I </second_frame>
            <third_frame>   P  H  I  F  C  I  P  L  F  T  L  V  N  L  Y  F  *  V  K  *  I  F  S  C  S  C  Y  L  L  L  K  I  Y  L  R  Y  Y  Y  Y  Y  L  K  I  I  F  I  L  V  *  P  K  *  *  A  K  H  L  L  T  D  *  Y  Q  P  K  L  L  T  T  W  N  L  D  C  S  G  V  S  K  V  E  I  V  *  L  E  S  G  K  I  L  A  *  Y  G  V  P  V  K  A  Y  V  K  P  C  V  R  R  C  L  S  Y  V  E  T  V  K  D  P  F  I  L  G  L  S  N  S  *  T  N  R  *  L  H  L  S  D  P  I  V  F  D  S  K  C  *  D  L  *  G  Y  A  D  *  R  Q  L  W  N  L  R  M  Y  I  T  Y  Y  Y  Y  Y  Y  Y  L  *  T  I  C  D  S  K  E  I  C  E  *  *  Q  N  I  I  T  Y  G  C  K  I  *  I  N  F  V  S  F  F  *  V  K  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0024F02.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 176 chains have been computed
$ 
$ memory statistics:
$ 278896 bytes spliced alignments in total
$ 108 spliced alignments have been stored
$ 2582 bytes was the average size of a spliced alignment
$ 29072 bytes predicted gene locations in total
$ 17 predicted gene locations have been stored
$ 1710 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 191 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 08:42:41
-->
