<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 12:00:22"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E720548" ref_strand="+" ref_description="SGN-E720548 [FC11AE10]">
      <seq>gggcgattggcggccaatcggccgaattcccatggggatccgatgaatcaattttatcatcataaaaactttattatataatcctcgcaaaaaaatattaatttttattttgaagaacaaagagagtgtgcagttttctgcattctctctgaaaattgttcgcggtgattaattggggtttttcccagtatttgaagctatataagtgtattgagtaatttgctaaattatgatgaacatgaagggaatttggaccaaacagacattgattaatctcctgttagggcaatttctctcccttttgattacttctactgggtttttatcatccgaactcgctagaaaaggaatcaatgcaccgacgtcccagtcttttcttaattacgtgctcttggcattattttatggagtttttatgatttacaggcaagaagggatcaaggcaaaatggtatttttacatcctccttggaatagttgatgtggaggccaactttctagttgtgaaggcttaccagtacacatccttaacaagcgtgatgttgctggattgctgggcaattccgtgtgttctgctttttacgtggtttttcttgaagacaaaatacagacccagaaaattagttggtgttgccatctgtattgctggtattgtcctggtgatattttcagatgtacatgccgaagatcgatcaagtggtagcaatcctatcaaaggggatatacttgtaattgctggagccacattatatgccgttagtaatgtcagtgaggagttttttgtcaaaagtgctgatatggttgaactcatggcatttctgggcctttttggtgccattgttagtggttgccaaataggcatacttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="12829" stop="17666"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13128" g_stop="13430" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="347" r_length="303" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13431" i_stop="14367" i_length="937">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14368" g_stop="14462" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="442" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14463" i_stop="15338" i_length="876">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15339" g_stop="15396" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="500" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="15397" i_stop="15981" i_length="585">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="15982" g_stop="16176" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="501" r_stop="695" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="16177" i_stop="16462" i_length="286">
            <donor d_prob="0.702" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="16463" g_stop="16539" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="696" r_stop="772" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="16540" i_stop="17283" i_length="744">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17284" g_stop="17366" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="773" r_stop="855" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="17367" i_stop="17530" i_length="164">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="17531" g_stop="17541" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="856" r_stop="866" r_length="11" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E720548" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>822</cumulative_length_of_scored_exons>
        <coverage percentage="0.949" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E720548" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13128" e_stop="13430"/>
          <exon e_start="14368" e_stop="14462"/>
          <exon e_start="15339" e_stop="15396"/>
          <exon e_start="15982" e_stop="16176"/>
          <exon e_start="16463" e_stop="16539"/>
          <exon e_start="17284" e_stop="17366"/>
          <exon e_start="17531" e_stop="17541"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATCAATTTTATCATCATAAAAACTTTATTATATAATCCTCGCAAAAAAATATTAATTTTTATTTTGAAGAACAAAGAGAGTGTGCAGTTTTCTGCATTCTCTCTGAAAATTGTTCGCGGTGATTAATTGGGGTTTTTCCCAGTATTTGAAGCTATATAAGTGTATTGAGTAATTTGCTAAATTATGATGAACATGAAGGGAATTTGGACCAAACAGACATTGATTAATCTCCTGTTAGGGCAATTTCTCTCCCTTTTGATTACTTCTACTGGGTTTTTATCATCCGAACTCGCTAGAAAAGGTAAAATTCTCTCTTGATTTTACTTTCTGTTCGAGTTTTTTTAAGTATACTGTTTGATTTTGATGTAAATTATATAATCTGAAGCTCGAGTGGGTGGACTCTGTGTTGTAGGAGCTAAGTTTTTCGTACTAAATGTGAGGTATAGATTCATCATAGCATTGAACAGTTATATATATATATATATACATACTTTTTTTTAATTTTATGGCAAGTACTCAAGCATGGGGCCTAGTGGTCAATAATGAAGTTGTTGGAGCAATGAGGTGTCAGGTTCAAATTCCAACGCGACAAAAACACTCGGTGATTCTTCCATGTGTTATAGTTTTGGTGGATAAAGTTATCTGGTACTTGTTGGTGGGAGGTGTTAGGTTTTCCCGTGAAATTAATGGAGGTGCATGAAAGCTGGTTCGGGCACCGCAATTTGAATTGATTAAAAGGGTAAGATTGATGTGTTATTGAAGATGGTGGATGTAGTGAAATATTAATTGTGGGCTCATAAATGAAAATTGGAGATTCAGTTTGGGAGGTAGATAATTGGAAAAATACTTCCCTTCAAAGTTTTGTTATCCAAACACTCTTTTTCCACAGAATTTTGCTTAGTATCTAGTCTATGGTCAAAGTACATCATCCCTATGGAGTGGAACCAGTATTAGCTAGCAAATTGAGTTCTTGAGATGGCTCTGTGAATATTTTTGTCTCTTTTAGCTTGTATTAATGGATGGTGAAGTGCAAGGGGAGGGTAGCAATGGTGTTCTAAACACGGACGTTCAGAAAATTTCGTACAAAGATAGTTTGGGGGTGATATAGAAGATATTGCCACCCAATATTCTGTCCTTGGCCTCTCCATTCCTTCCTTCAAAAGACAAAGTGTAATTTAATATTTAGTGTCCTTTATCCATATCTCTTTTTTGATAAGTAATTTGTTTCCTTGTTATAGGAATCAATGCACCGACGTCCCAGTCTTTTCTTAATTACGTGCTCTTGGCATTATTTTATGGAGTTTTTATGATTTACAGGCAAGAAGGGATCAAGGTTTGCTTCAGTTAGATTTTTCATCATTGTTCGGCATATAATTTTCTAATGTGCTTTCTGCAATTTAATTATTTGACATATATCTGAAGAATGACAATACTTTTTGACAAGTATATGAAGGCTGCCATTTTGTGGTGGAAGTTAGTTATCAGTGTTCTGAGGCATGTTGAATATCCTAGGCTCAGGAAAAAAATATAGTATTTCAAAATATGTCCGAGATCTAATCAATTCCTGCAAGAGTAATTAGGCCTAATTTGGTTATTCTCCATACAACATTTTCTTTTCTATTGGCCTTGCATATTCTCCCACTTAGTACACCTATTTTTCATTTCTCACCTAAGTAGTTATTAAAAGAGAATTATGTTCAGCACATATAGAGTGAAAGCTTTTGGGACAAAGTTTAAGGGCTTTGACGAATCCTTAATTTGAGAACCAAAAAACTAGCCTGAACTCGTTTCGAGGCACATTGCTTGAACAAGTTCTGATGTGTTGCTATTTACTGTAGAATATGAATATCCAACTTAAACCCTTATTGTGACAGGAGGGGGGGTGGAGTGGGGGAGAGTAGCTCAAAACTTTTATATACCTTATCAAATACTCTTAAGATCAAAGGTTGGCTAGCATACCATATGTGGCGAGTATTCAACTTGAAACCTTGACACTATGGATTGAGTATTCCAGTTCCCATGACATGTAAAAGCTCCTTTTAATGCCGTTATCAGATATTGGACATCTATATTCAAAAGAATTCCTAAGAATTGTGTTCTTTTTCTTTGTTTTAAACAACATTATTTGCTGATGCTTATTTAATTTAGCAAGCTGTTGCATTCAGATTGGATGCTTTGTTTACCTTCATTTTCTTTTCTGTTTGACCAGGCAAAATGGTATTTTTACATCCTCCTTGGAATAGTTGATGTGGAGGCCAACTTTCTAGGTAATTGCCTTACTTACCTTCTCTTGTGGATGGAATGCAACTGAACTGTTCTCCCTCATCTTTCTCCATCTCTTTCAATCTTCCAGAAATGAACATGTTCTACTTGATGAGTATTCACTGATCAAACCTTGATGACTTGCTTTTTACTAAACGATATACATGCAATGTTACTTCTATTTAAAAAGTCAATTCCGTCCATGTCAGCTAAACTATGTGATTAAAAGGCAATTCCGTGCATATCAGTTGAACTATGTGATTATTATGCATCATGGGAACATCACTATGTTGGACAACAGAACCAAAAAAACTAGTACGATAGTTCTTCCTCAACGTTCTAGTGTTTGTTCTTCGATTGTTTCTTGCTAGGATTGACCACAAAACCATATGAGTGTTTTATGAAGATTTTTCTTTAGCATTGCATCGTCTCTCAAAATACGTAGTTTCCTCTGTACTTCTACAGACGATAATCTCCTCATCTGGATTGAGATTATGAGGATTGGCAATGCATGTTTGCACAAAATAGGAATTCCACATTTTGATATTAAGTAAACTCTCAGTTCATTTTCTGTTGCCTTTGCTTTGCAGTTGTGAAGGCTTACCAGTACACATCCTTAACAAGCGTGATGTTGCTGGATTGCTGGGCAATTCCGTGTGTTCTGCTTTTTACGTGGTTTTTCTTGAAGACAAAATACAGACCCAGAAAATTAGTTGGTGTTGCCATCTGTATTGCTGGTATTGTCCTGGTGATATTTTCAGATGTACATGCCGAAGATCGATCAAGTAATACTGTTACAACCAGTAGTCATCCTACTTGTTCCCTTTGATGTTCATTATTCATGTGGCTTCACTGCATGCCCTTTTCCATTGCTTAAGTTGGTTTATATGTATGATCGTATATCATCTGCTACTTTTTGGAAAGGGGGTAATCATATGATTCTTTGTGAATCTAATCCAGCTGCTTCTCATTTTAGTGATTTTGCGCTTTAGTAATTTGCCGGCTCCATTTAACTCAAATTCAGCATGTCTATTAGCAGAAAAATAATACTTTAATTTCTCACTGCTGTAGGTGGTAGCAATCCTATCAAAGGGGATATACTTGTAATTGCTGGAGCCACATTATATGCCGTTAGTAATGTCAGTGAGGTAAGCAAATGATATCTGTGAATATTCAGTTATTCACTAGCTCCTTTGAACCAAAAATGATATCTATGTATAGTTAGAGAACTTCTTTCTTCCCTGTGTGGATGCCTCAGCGAGGAGGTTGGAAATGGTAGGTAGGAGGAGATGTAAATGTAGGCTGAAGAAGTATTGGGGAGAGGTGATTAAACATGACATATCTGTAGTTTATCAAGAACATGACCCTTGAGGATATGAAGGTCGATGATTAGGGTAGAAGACTATAGGTTCCTTCTCAGTATTATTACTATTACTCTCCTATTATCTTGTCCTTCGAGTGCTATTTTATCCGTTATCCTGTGCTTCAGTTGTATTATTTATTGTTTTTACTGTTCTTTGCTATATTGTTTATTTTTGCACTGTTGTATTTTCTTCTCAAACCTGCTTTAAAATGCTTTACTTGAGGGTTTATTGGAAACAACCTCTCTACCTTCACAAGGTAGGGGTGCGTAGCCCCACTTCTGGGATTACACAACATATGTTGTTAGCAATTCACCTTATGATAAAGGATAAAAGTCATTCCACAAACTGTGAAGGCAATAATAGACGGGGAGTTCCATTCTTGTATATATTATATTTTTCTCAGGTAGCATTGATTCCTTGTACAGTACATTACTCTTTTTACTATGAACTATTTCTTTCTTGGTCTTGATACTCAAGTTGGTTAGCCTGTTTCACATTGTTAATGCTTTAATTTCATGTTCTATGCAGGAGTTTTTTGTCAAAAGTGCTGATATGGTTGAACTCATGGCATTTCTGGGCCTTTTTGGTGCCATTGTTAGTGGTTGCCAAATGTATCCTAATTCTCTTTAATGTTCAAAACACAATTCACACATTTGGATGATACTTGATTCAGTCATTATAAGAGCTTATAGGGTTTAAACTTCTTTCTTGATAAATCCATATTCTTTCACATGCTGATGATTTTCTGTACGCAATTTCTTTAACCATGCTACAGAGGCATACTTG</genome_strand>
        <mrna_strand>GAATCAATTTTATCATCATAAAAACTTTATTATATAATCCTCGCAAAAAAATATTAATTTTTATTTTGAAGAACAAAGAGAGTGTGCAGTTTTCTGCATTCTCTCTGAAAATTGTTCGCGGTGATTAATTGGGGTTTTTCCCAGTATTTGAAGCTATATAAGTGTATTGAGTAATTTGCTAAATTATGATGAACATGAAGGGAATTTGGACCAAACAGACATTGATTAATCTCCTGTTAGGGCAATTTCTCTCCCTTTTGATTACTTCTACTGGGTTTTTATCATCCGAACTCGCTAGAAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCAATGCACCGACGTCCCAGTCTTTTCTTAATTACGTGCTCTTGGCATTATTTTATGGAGTTTTTATGATTTACAGGCAAGAAGGGATCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAATGGTATTTTTACATCCTCCTTGGAATAGTTGATGTGGAGGCCAACTTTCTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGAAGGCTTACCAGTACACATCCTTAACAAGCGTGATGTTGCTGGATTGCTGGGCAATTCCGTGTGTTCTGCTTTTTACGTGGTTTTTCTTGAAGACAAAATACAGACCCAGAAAATTAGTTGGTGTTGCCATCTGTATTGCTGGTATTGTCCTGGTGATATTTTCAGATGTACATGCCGAAGATCGATCAA..............................................................................................................................................................................................................................................................................................GTGGTAGCAATCCTATCAAAGGGGATATACTTGTAATTGCTGGAGCCACATTATATGCCGTTAGTAATGTCAGTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTTTTTGTCAAAAGTGCTGATATGGTTGAACTCATGGCATTTCTGGGCCTTTTTGGTGCCATTGTTAGTGGTTGCCAAAT....................................................................................................................................................................AGGCATACTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E305608" ref_strand="+" ref_description="SGN-E305608 [cLEX-14-O10]">
      <seq>ctagcataccatatgtggcgagtattcaacttgaaaccttgacactatggattgagtattccagttcccatgacatgcaaaatggtatttttacatcctccttggaatagttgatgtggaggccaactttctagttgtgaaggcttaccagtacacatccttaacaagcgtgatgttgctggattgctgggcaattccgtgtgttctgctttttacgtggtttttcttgaagacaaaatacagacccagaaaattagttggtgttgccatctgtattgctggtattgtcctggtgatattttcagatgtacatgccgaagatcgatcaagtggtagcaatcctatcaaaggggatatacttgtaattgctggagccacattatatgccgttagtaatgtcagtgaggagttttttgtcaaaagtgctgatatggttgaactcatggcatttctgggcctttttggtgccattgttagtggttgccaaataggcatacttgagcgcaatgagttgaagtccattcactggtcagctggagcagcacttccctttgttggatttgcattggcgatgtttcttttctactcatttgttcccattttgctgaagaggagtggtgctacaatgctaaatctagccttgcttacctctgatatgtgggctgttgtaattcgtatctttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="14780" stop="19159"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15080" g_stop="15155" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15156" i_stop="15338" i_length="183">
            <donor d_prob="0.798" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15339" g_stop="15396" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="134" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15397" i_stop="15981" i_length="585">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15982" g_stop="16176" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="329" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16177" i_stop="16462" i_length="286">
            <donor d_prob="0.702" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="16463" g_stop="16539" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="406" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="16540" i_stop="17283" i_length="744">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17284" g_stop="17366" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="489" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="17367" i_stop="17530" i_length="164">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17531" g_stop="17582" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="541" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="17583" i_stop="18474" i_length="892">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="18475" g_stop="18543" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="542" r_stop="610" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="18544" i_stop="18786" i_length="243">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.874" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="18787" g_stop="18859" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="611" r_stop="683" r_length="73" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E305608" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>683</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E305608" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15080" e_stop="15155"/>
          <exon e_start="15339" e_stop="15396"/>
          <exon e_start="15982" e_stop="16176"/>
          <exon e_start="16463" e_stop="16539"/>
          <exon e_start="17284" e_stop="17366"/>
          <exon e_start="17531" e_stop="17582"/>
          <exon e_start="18475" e_stop="18543"/>
          <exon e_start="18787" e_stop="18859"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGCATACCATATGTGGCGAGTATTCAACTTGAAACCTTGACACTATGGATTGAGTATTCCAGTTCCCATGACATGTAAAAGCTCCTTTTAATGCCGTTATCAGATATTGGACATCTATATTCAAAAGAATTCCTAAGAATTGTGTTCTTTTTCTTTGTTTTAAACAACATTATTTGCTGATGCTTATTTAATTTAGCAAGCTGTTGCATTCAGATTGGATGCTTTGTTTACCTTCATTTTCTTTTCTGTTTGACCAGGCAAAATGGTATTTTTACATCCTCCTTGGAATAGTTGATGTGGAGGCCAACTTTCTAGGTAATTGCCTTACTTACCTTCTCTTGTGGATGGAATGCAACTGAACTGTTCTCCCTCATCTTTCTCCATCTCTTTCAATCTTCCAGAAATGAACATGTTCTACTTGATGAGTATTCACTGATCAAACCTTGATGACTTGCTTTTTACTAAACGATATACATGCAATGTTACTTCTATTTAAAAAGTCAATTCCGTCCATGTCAGCTAAACTATGTGATTAAAAGGCAATTCCGTGCATATCAGTTGAACTATGTGATTATTATGCATCATGGGAACATCACTATGTTGGACAACAGAACCAAAAAAACTAGTACGATAGTTCTTCCTCAACGTTCTAGTGTTTGTTCTTCGATTGTTTCTTGCTAGGATTGACCACAAAACCATATGAGTGTTTTATGAAGATTTTTCTTTAGCATTGCATCGTCTCTCAAAATACGTAGTTTCCTCTGTACTTCTACAGACGATAATCTCCTCATCTGGATTGAGATTATGAGGATTGGCAATGCATGTTTGCACAAAATAGGAATTCCACATTTTGATATTAAGTAAACTCTCAGTTCATTTTCTGTTGCCTTTGCTTTGCAGTTGTGAAGGCTTACCAGTACACATCCTTAACAAGCGTGATGTTGCTGGATTGCTGGGCAATTCCGTGTGTTCTGCTTTTTACGTGGTTTTTCTTGAAGACAAAATACAGACCCAGAAAATTAGTTGGTGTTGCCATCTGTATTGCTGGTATTGTCCTGGTGATATTTTCAGATGTACATGCCGAAGATCGATCAAGTAATACTGTTACAACCAGTAGTCATCCTACTTGTTCCCTTTGATGTTCATTATTCATGTGGCTTCACTGCATGCCCTTTTCCATTGCTTAAGTTGGTTTATATGTATGATCGTATATCATCTGCTACTTTTTGGAAAGGGGGTAATCATATGATTCTTTGTGAATCTAATCCAGCTGCTTCTCATTTTAGTGATTTTGCGCTTTAGTAATTTGCCGGCTCCATTTAACTCAAATTCAGCATGTCTATTAGCAGAAAAATAATACTTTAATTTCTCACTGCTGTAGGTGGTAGCAATCCTATCAAAGGGGATATACTTGTAATTGCTGGAGCCACATTATATGCCGTTAGTAATGTCAGTGAGGTAAGCAAATGATATCTGTGAATATTCAGTTATTCACTAGCTCCTTTGAACCAAAAATGATATCTATGTATAGTTAGAGAACTTCTTTCTTCCCTGTGTGGATGCCTCAGCGAGGAGGTTGGAAATGGTAGGTAGGAGGAGATGTAAATGTAGGCTGAAGAAGTATTGGGGAGAGGTGATTAAACATGACATATCTGTAGTTTATCAAGAACATGACCCTTGAGGATATGAAGGTCGATGATTAGGGTAGAAGACTATAGGTTCCTTCTCAGTATTATTACTATTACTCTCCTATTATCTTGTCCTTCGAGTGCTATTTTATCCGTTATCCTGTGCTTCAGTTGTATTATTTATTGTTTTTACTGTTCTTTGCTATATTGTTTATTTTTGCACTGTTGTATTTTCTTCTCAAACCTGCTTTAAAATGCTTTACTTGAGGGTTTATTGGAAACAACCTCTCTACCTTCACAAGGTAGGGGTGCGTAGCCCCACTTCTGGGATTACACAACATATGTTGTTAGCAATTCACCTTATGATAAAGGATAAAAGTCATTCCACAAACTGTGAAGGCAATAATAGACGGGGAGTTCCATTCTTGTATATATTATATTTTTCTCAGGTAGCATTGATTCCTTGTACAGTACATTACTCTTTTTACTATGAACTATTTCTTTCTTGGTCTTGATACTCAAGTTGGTTAGCCTGTTTCACATTGTTAATGCTTTAATTTCATGTTCTATGCAGGAGTTTTTTGTCAAAAGTGCTGATATGGTTGAACTCATGGCATTTCTGGGCCTTTTTGGTGCCATTGTTAGTGGTTGCCAAATGTATCCTAATTCTCTTTAATGTTCAAAACACAATTCACACATTTGGATGATACTTGATTCAGTCATTATAAGAGCTTATAGGGTTTAAACTTCTTTCTTGATAAATCCATATTCTTTCACATGCTGATGATTTTCTGTACGCAATTTCTTTAACCATGCTACAGAGGCATACTTGAGCGCAATGAGTTGAAGTCCATTCACTGGTCAGCTGGAGCAGTAAGTCTCTTATCTTTGATCTACTTCCTCGCAAATGAACATGGATACAGAAAATGAAGAAAGACATAAATGCTGCCTTCAGAAGAGCAAACTGGTGTAGCATTATTATCTTTAATTTCTGAGCAAGTTCACTGATGTTGGATTTATGACTTAATTGAACACTTCTTTTTCCCACAAGTATCAATGGAACCCAAACATGAAGCTGTAATTTTAAAAGGTGAACTTAACAATACACAACCTGCATTATTTTTAATTCTAAGAAGAATGGGGTCCACATTTTCCTGATGTTCCTATACAGTCATCTGCCCTCCCAATAATGAAAAGGAAAACACTGCTGAAAAAGGAATGAAATCTGATGTGATTGAGAAAGCAACATCGTACTTCTTACACCATTATAAAGTATAAAACAGTATCCAAGCTTTCAGATCCTCTCACTCCACTTTCAAAAACATTATAACTCTTTTATGTTCAACCACTTCTGCTAACAAATTGTACACGCTACAAAGAGTAAGTTTTCCCATCTTAATTCTAATTCTAAATCTGGAAAGGAAAGAAATAGAGGGCTGTTATTTTAGGAAATTGGGATAAAGGTGGTGGGCTATGGTGCGAGGGCTCAGAGTAGGGGCATTCAGGCTAAGTCACTGAATTCTGTTAACTGAAACAATATAGAAATATGAGATATGTCGGGGTCTTTTATTTCAAGGAGCCTAACTTGCCAGTCCAAAAGTAAGTCTAATAATGTGAGTTGTGAGGTTATTTAAGAGGGGAACTGACTCATCATTCCTTCTCATTTTGTGTTCATGTAATTTGTTTCATTGTCCTTTTGCTGGCAGTCTTTTAGTTTATCCTCACATTAAGTTGTTTAAACATTTATTACCATGTGGAATTTCAGGCACTTCCCTTTGTTGGATTTGCATTGGCGATGTTTCTTTTCTACTCATTTGTTCCCATTTTGCTGAAGGTATTGCCCCCTCTCTCAATCTCTCCGTCAATATATAAAATAAGCGATTGGCAGTCAACTATGTTCCAATCTAAATATAGTTGTGTTGCAATCTACACTATGTTGACCTGTTAAAGAAAATGATGTGGTGTTGTAGATATCATCTCATTCTTGGTTCTTGATAGTTATTTTCTGTTGATGCTCATTAGTTTTGGAGCTAGTTTTTTTTTTTTTCCATTCTAAGATGCCACCTTTTGGATGCAGAGGAGTGGTGCTACAATGCTAAATCTAGCCTTGCTTACCTCTGATATGTGGGCTGTTGTAATTCGTATCTTTG</genome_strand>
        <mrna_strand>CTAGCATACCATATGTGGCGAGTATTCAACTTGAAACCTTGACACTATGGATTGAGTATTCCAGTTCCCATGACAT.......................................................................................................................................................................................GCAAAATGGTATTTTTACATCCTCCTTGGAATAGTTGATGTGGAGGCCAACTTTCTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGAAGGCTTACCAGTACACATCCTTAACAAGCGTGATGTTGCTGGATTGCTGGGCAATTCCGTGTGTTCTGCTTTTTACGTGGTTTTTCTTGAAGACAAAATACAGACCCAGAAAATTAGTTGGTGTTGCCATCTGTATTGCTGGTATTGTCCTGGTGATATTTTCAGATGTACATGCCGAAGATCGATCAA..............................................................................................................................................................................................................................................................................................GTGGTAGCAATCCTATCAAAGGGGATATACTTGTAATTGCTGGAGCCACATTATATGCCGTTAGTAATGTCAGTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTTTTTGTCAAAAGTGCTGATATGGTTGAACTCATGGCATTTCTGGGCCTTTTTGGTGCCATTGTTAGTGGTTGCCAAAT....................................................................................................................................................................AGGCATACTTGAGCGCAATGAGTTGAAGTCCATTCACTGGTCAGCTGGAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTCCCTTTGTTGGATTTGCATTGGCGATGTTTCTTTTCTACTCATTTGTTCCCATTTTGCTGAAG...................................................................................................................................................................................................................................................AGGAGTGGTGCTACAATGCTAAATCTAGCCTTGCTTACCTCTGATATGTGGGCTGTTGTAATTCGTATCTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E374030" ref_strand="+" ref_description="SGN-E374030 [TUS-33-G7]">
      <seq>ctagcataccatatgtggcgagtattcaacttgaaaccttgacactatggattgagtattccagttcccatgacatgcaaaatggtatttttacatcctccttggaatagttgatgtggaggccaactttctagttgtgaaggcttaccagtacacatccttaacaagcgtgatgttgctggattgctgggcaattccgtgtgttctgctttttacgtggtttttcttgaagacaaaatacagacccagaaaattagttggtgttgccatctgtattgctggtattgtcctggtgatattttcagatgtacatgccgaagatcgatcaagtggtagcaatcctatcaaaggggatatacttgtaattgctggagccacattatatgccgttagtaatgtcagtgaggagttttttgtcaaaagtgctgatatggttgaactcatggcatttctgggcctttttggtgccattgttagtggttgccaaataggcatacttgagcgcaatgagttgaagtccattcactggtcagctggagcagcacttccctttgttggatttgcattggcgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="14780" stop="18807"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15080" g_stop="15155" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15156" i_stop="15338" i_length="183">
            <donor d_prob="0.798" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15339" g_stop="15396" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="134" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15397" i_stop="15981" i_length="585">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15982" g_stop="16176" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="329" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16177" i_stop="16462" i_length="286">
            <donor d_prob="0.702" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="16463" g_stop="16539" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="406" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="16540" i_stop="17283" i_length="744">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17284" g_stop="17366" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="489" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="17367" i_stop="17530" i_length="164">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17531" g_stop="17582" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="541" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="17583" i_stop="18474" i_length="892">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="18475" g_stop="18507" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="542" r_stop="574" r_length="33" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E374030" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E374030" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15080" e_stop="15155"/>
          <exon e_start="15339" e_stop="15396"/>
          <exon e_start="15982" e_stop="16176"/>
          <exon e_start="16463" e_stop="16539"/>
          <exon e_start="17284" e_stop="17366"/>
          <exon e_start="17531" e_stop="17582"/>
          <exon e_start="18475" e_stop="18507"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGCATACCATATGTGGCGAGTATTCAACTTGAAACCTTGACACTATGGATTGAGTATTCCAGTTCCCATGACATGTAAAAGCTCCTTTTAATGCCGTTATCAGATATTGGACATCTATATTCAAAAGAATTCCTAAGAATTGTGTTCTTTTTCTTTGTTTTAAACAACATTATTTGCTGATGCTTATTTAATTTAGCAAGCTGTTGCATTCAGATTGGATGCTTTGTTTACCTTCATTTTCTTTTCTGTTTGACCAGGCAAAATGGTATTTTTACATCCTCCTTGGAATAGTTGATGTGGAGGCCAACTTTCTAGGTAATTGCCTTACTTACCTTCTCTTGTGGATGGAATGCAACTGAACTGTTCTCCCTCATCTTTCTCCATCTCTTTCAATCTTCCAGAAATGAACATGTTCTACTTGATGAGTATTCACTGATCAAACCTTGATGACTTGCTTTTTACTAAACGATATACATGCAATGTTACTTCTATTTAAAAAGTCAATTCCGTCCATGTCAGCTAAACTATGTGATTAAAAGGCAATTCCGTGCATATCAGTTGAACTATGTGATTATTATGCATCATGGGAACATCACTATGTTGGACAACAGAACCAAAAAAACTAGTACGATAGTTCTTCCTCAACGTTCTAGTGTTTGTTCTTCGATTGTTTCTTGCTAGGATTGACCACAAAACCATATGAGTGTTTTATGAAGATTTTTCTTTAGCATTGCATCGTCTCTCAAAATACGTAGTTTCCTCTGTACTTCTACAGACGATAATCTCCTCATCTGGATTGAGATTATGAGGATTGGCAATGCATGTTTGCACAAAATAGGAATTCCACATTTTGATATTAAGTAAACTCTCAGTTCATTTTCTGTTGCCTTTGCTTTGCAGTTGTGAAGGCTTACCAGTACACATCCTTAACAAGCGTGATGTTGCTGGATTGCTGGGCAATTCCGTGTGTTCTGCTTTTTACGTGGTTTTTCTTGAAGACAAAATACAGACCCAGAAAATTAGTTGGTGTTGCCATCTGTATTGCTGGTATTGTCCTGGTGATATTTTCAGATGTACATGCCGAAGATCGATCAAGTAATACTGTTACAACCAGTAGTCATCCTACTTGTTCCCTTTGATGTTCATTATTCATGTGGCTTCACTGCATGCCCTTTTCCATTGCTTAAGTTGGTTTATATGTATGATCGTATATCATCTGCTACTTTTTGGAAAGGGGGTAATCATATGATTCTTTGTGAATCTAATCCAGCTGCTTCTCATTTTAGTGATTTTGCGCTTTAGTAATTTGCCGGCTCCATTTAACTCAAATTCAGCATGTCTATTAGCAGAAAAATAATACTTTAATTTCTCACTGCTGTAGGTGGTAGCAATCCTATCAAAGGGGATATACTTGTAATTGCTGGAGCCACATTATATGCCGTTAGTAATGTCAGTGAGGTAAGCAAATGATATCTGTGAATATTCAGTTATTCACTAGCTCCTTTGAACCAAAAATGATATCTATGTATAGTTAGAGAACTTCTTTCTTCCCTGTGTGGATGCCTCAGCGAGGAGGTTGGAAATGGTAGGTAGGAGGAGATGTAAATGTAGGCTGAAGAAGTATTGGGGAGAGGTGATTAAACATGACATATCTGTAGTTTATCAAGAACATGACCCTTGAGGATATGAAGGTCGATGATTAGGGTAGAAGACTATAGGTTCCTTCTCAGTATTATTACTATTACTCTCCTATTATCTTGTCCTTCGAGTGCTATTTTATCCGTTATCCTGTGCTTCAGTTGTATTATTTATTGTTTTTACTGTTCTTTGCTATATTGTTTATTTTTGCACTGTTGTATTTTCTTCTCAAACCTGCTTTAAAATGCTTTACTTGAGGGTTTATTGGAAACAACCTCTCTACCTTCACAAGGTAGGGGTGCGTAGCCCCACTTCTGGGATTACACAACATATGTTGTTAGCAATTCACCTTATGATAAAGGATAAAAGTCATTCCACAAACTGTGAAGGCAATAATAGACGGGGAGTTCCATTCTTGTATATATTATATTTTTCTCAGGTAGCATTGATTCCTTGTACAGTACATTACTCTTTTTACTATGAACTATTTCTTTCTTGGTCTTGATACTCAAGTTGGTTAGCCTGTTTCACATTGTTAATGCTTTAATTTCATGTTCTATGCAGGAGTTTTTTGTCAAAAGTGCTGATATGGTTGAACTCATGGCATTTCTGGGCCTTTTTGGTGCCATTGTTAGTGGTTGCCAAATGTATCCTAATTCTCTTTAATGTTCAAAACACAATTCACACATTTGGATGATACTTGATTCAGTCATTATAAGAGCTTATAGGGTTTAAACTTCTTTCTTGATAAATCCATATTCTTTCACATGCTGATGATTTTCTGTACGCAATTTCTTTAACCATGCTACAGAGGCATACTTGAGCGCAATGAGTTGAAGTCCATTCACTGGTCAGCTGGAGCAGTAAGTCTCTTATCTTTGATCTACTTCCTCGCAAATGAACATGGATACAGAAAATGAAGAAAGACATAAATGCTGCCTTCAGAAGAGCAAACTGGTGTAGCATTATTATCTTTAATTTCTGAGCAAGTTCACTGATGTTGGATTTATGACTTAATTGAACACTTCTTTTTCCCACAAGTATCAATGGAACCCAAACATGAAGCTGTAATTTTAAAAGGTGAACTTAACAATACACAACCTGCATTATTTTTAATTCTAAGAAGAATGGGGTCCACATTTTCCTGATGTTCCTATACAGTCATCTGCCCTCCCAATAATGAAAAGGAAAACACTGCTGAAAAAGGAATGAAATCTGATGTGATTGAGAAAGCAACATCGTACTTCTTACACCATTATAAAGTATAAAACAGTATCCAAGCTTTCAGATCCTCTCACTCCACTTTCAAAAACATTATAACTCTTTTATGTTCAACCACTTCTGCTAACAAATTGTACACGCTACAAAGAGTAAGTTTTCCCATCTTAATTCTAATTCTAAATCTGGAAAGGAAAGAAATAGAGGGCTGTTATTTTAGGAAATTGGGATAAAGGTGGTGGGCTATGGTGCGAGGGCTCAGAGTAGGGGCATTCAGGCTAAGTCACTGAATTCTGTTAACTGAAACAATATAGAAATATGAGATATGTCGGGGTCTTTTATTTCAAGGAGCCTAACTTGCCAGTCCAAAAGTAAGTCTAATAATGTGAGTTGTGAGGTTATTTAAGAGGGGAACTGACTCATCATTCCTTCTCATTTTGTGTTCATGTAATTTGTTTCATTGTCCTTTTGCTGGCAGTCTTTTAGTTTATCCTCACATTAAGTTGTTTAAACATTTATTACCATGTGGAATTTCAGGCACTTCCCTTTGTTGGATTTGCATTGGCGATG</genome_strand>
        <mrna_strand>CTAGCATACCATATGTGGCGAGTATTCAACTTGAAACCTTGACACTATGGATTGAGTATTCCAGTTCCCATGACAT.......................................................................................................................................................................................GCAAAATGGTATTTTTACATCCTCCTTGGAATAGTTGATGTGGAGGCCAACTTTCTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGAAGGCTTACCAGTACACATCCTTAACAAGCGTGATGTTGCTGGATTGCTGGGCAATTCCGTGTGTTCTGCTTTTTACGTGGTTTTTCTTGAAGACAAAATACAGACCCAGAAAATTAGTTGGTGTTGCCATCTGTATTGCTGGTATTGTCCTGGTGATATTTTCAGATGTACATGCCGAAGATCGATCAA..............................................................................................................................................................................................................................................................................................GTGGTAGCAATCCTATCAAAGGGGATATACTTGTAATTGCTGGAGCCACATTATATGCCGTTAGTAATGTCAGTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTTTTTGTCAAAAGTGCTGATATGGTTGAACTCATGGCATTTCTGGGCCTTTTTGGTGCCATTGTTAGTGGTTGCCAAAT....................................................................................................................................................................AGGCATACTTGAGCGCAATGAGTTGAAGTCCATTCACTGGTCAGCTGGAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTCCCTTTGTTGGATTTGCATTGGCGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E706436" ref_strand="+" ref_description="SGN-E706436 [FA29DG12]">
      <seq>gatcaaggcaaaatggtatttttacatcctccttggaatagttgatgtggaggccaactttctagttgtgaaggcttaccagtacacatccttaacaagcgtgatgttgctggattgctgggcaattccgtgtgttctgctttttacgtggtttttcttgaagacaaaatacagacccagaaaattagttggtgttgccatctgtattgctggtattgtcctggtgatattttcagatgtacatgccgaagatcgatcaagtggtagcaatcctatcaaaggggatatacttgtaattgctggagccacattatatgccgttagtaatgtcagtgaggagttttttgtcaaaagtgctgatatggttgaactcatggcatttctgggcctttttggtgccattgttagtggttgccaaataggcatacttgagcgcaatgagttgaagtccattcactggtcagctggagcagcacttccctttgttggatttgcattggcgatgtttcttttctactcatttgttcccattttgctgaagaggagtggtgctacaatgctaaatctagccttgcttacctctgatatgtgggctgttgtaattcgtatctttgtataccatcagaaggttgactggatatattttgtagcttttgctgctgttgctgtgggtcttcttatttattctgggcgggataaggtggataagaacgtacctgatgaaggcattgtaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="15033" stop="20235"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15339" g_stop="15396" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="65" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15397" i_stop="15981" i_length="585">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15982" g_stop="16176" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="66" r_stop="260" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16177" i_stop="16462" i_length="286">
            <donor d_prob="0.702" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16463" g_stop="16539" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="337" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16540" i_stop="17283" i_length="744">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17284" g_stop="17366" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="338" r_stop="420" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17367" i_stop="17530" i_length="164">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17531" g_stop="17582" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="472" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="17583" i_stop="18474" i_length="892">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="18475" g_stop="18543" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="541" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="18544" i_stop="18786" i_length="243">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.874" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="18787" g_stop="18873" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="542" r_stop="628" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="18874" i_stop="18990" i_length="117">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="18991" g_stop="19052" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="629" r_stop="690" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="19053" i_stop="19889" i_length="837">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="19890" g_stop="19935" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="691" r_stop="736" r_length="46" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E706436" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>729</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E706436" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15339" e_stop="15396"/>
          <exon e_start="15982" e_stop="16176"/>
          <exon e_start="16463" e_stop="16539"/>
          <exon e_start="17284" e_stop="17366"/>
          <exon e_start="17531" e_stop="17582"/>
          <exon e_start="18475" e_stop="18543"/>
          <exon e_start="18787" e_stop="18873"/>
          <exon e_start="18991" e_stop="19052"/>
          <exon e_start="19890" e_stop="19935"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAAATGGTATTTTTACATCCTCCTTGGAATAGTTGATGTGGAGGCCAACTTTCTAGGTAATTGCCTTACTTACCTTCTCTTGTGGATGGAATGCAACTGAACTGTTCTCCCTCATCTTTCTCCATCTCTTTCAATCTTCCAGAAATGAACATGTTCTACTTGATGAGTATTCACTGATCAAACCTTGATGACTTGCTTTTTACTAAACGATATACATGCAATGTTACTTCTATTTAAAAAGTCAATTCCGTCCATGTCAGCTAAACTATGTGATTAAAAGGCAATTCCGTGCATATCAGTTGAACTATGTGATTATTATGCATCATGGGAACATCACTATGTTGGACAACAGAACCAAAAAAACTAGTACGATAGTTCTTCCTCAACGTTCTAGTGTTTGTTCTTCGATTGTTTCTTGCTAGGATTGACCACAAAACCATATGAGTGTTTTATGAAGATTTTTCTTTAGCATTGCATCGTCTCTCAAAATACGTAGTTTCCTCTGTACTTCTACAGACGATAATCTCCTCATCTGGATTGAGATTATGAGGATTGGCAATGCATGTTTGCACAAAATAGGAATTCCACATTTTGATATTAAGTAAACTCTCAGTTCATTTTCTGTTGCCTTTGCTTTGCAGTTGTGAAGGCTTACCAGTACACATCCTTAACAAGCGTGATGTTGCTGGATTGCTGGGCAATTCCGTGTGTTCTGCTTTTTACGTGGTTTTTCTTGAAGACAAAATACAGACCCAGAAAATTAGTTGGTGTTGCCATCTGTATTGCTGGTATTGTCCTGGTGATATTTTCAGATGTACATGCCGAAGATCGATCAAGTAATACTGTTACAACCAGTAGTCATCCTACTTGTTCCCTTTGATGTTCATTATTCATGTGGCTTCACTGCATGCCCTTTTCCATTGCTTAAGTTGGTTTATATGTATGATCGTATATCATCTGCTACTTTTTGGAAAGGGGGTAATCATATGATTCTTTGTGAATCTAATCCAGCTGCTTCTCATTTTAGTGATTTTGCGCTTTAGTAATTTGCCGGCTCCATTTAACTCAAATTCAGCATGTCTATTAGCAGAAAAATAATACTTTAATTTCTCACTGCTGTAGGTGGTAGCAATCCTATCAAAGGGGATATACTTGTAATTGCTGGAGCCACATTATATGCCGTTAGTAATGTCAGTGAGGTAAGCAAATGATATCTGTGAATATTCAGTTATTCACTAGCTCCTTTGAACCAAAAATGATATCTATGTATAGTTAGAGAACTTCTTTCTTCCCTGTGTGGATGCCTCAGCGAGGAGGTTGGAAATGGTAGGTAGGAGGAGATGTAAATGTAGGCTGAAGAAGTATTGGGGAGAGGTGATTAAACATGACATATCTGTAGTTTATCAAGAACATGACCCTTGAGGATATGAAGGTCGATGATTAGGGTAGAAGACTATAGGTTCCTTCTCAGTATTATTACTATTACTCTCCTATTATCTTGTCCTTCGAGTGCTATTTTATCCGTTATCCTGTGCTTCAGTTGTATTATTTATTGTTTTTACTGTTCTTTGCTATATTGTTTATTTTTGCACTGTTGTATTTTCTTCTCAAACCTGCTTTAAAATGCTTTACTTGAGGGTTTATTGGAAACAACCTCTCTACCTTCACAAGGTAGGGGTGCGTAGCCCCACTTCTGGGATTACACAACATATGTTGTTAGCAATTCACCTTATGATAAAGGATAAAAGTCATTCCACAAACTGTGAAGGCAATAATAGACGGGGAGTTCCATTCTTGTATATATTATATTTTTCTCAGGTAGCATTGATTCCTTGTACAGTACATTACTCTTTTTACTATGAACTATTTCTTTCTTGGTCTTGATACTCAAGTTGGTTAGCCTGTTTCACATTGTTAATGCTTTAATTTCATGTTCTATGCAGGAGTTTTTTGTCAAAAGTGCTGATATGGTTGAACTCATGGCATTTCTGGGCCTTTTTGGTGCCATTGTTAGTGGTTGCCAAATGTATCCTAATTCTCTTTAATGTTCAAAACACAATTCACACATTTGGATGATACTTGATTCAGTCATTATAAGAGCTTATAGGGTTTAAACTTCTTTCTTGATAAATCCATATTCTTTCACATGCTGATGATTTTCTGTACGCAATTTCTTTAACCATGCTACAGAGGCATACTTGAGCGCAATGAGTTGAAGTCCATTCACTGGTCAGCTGGAGCAGTAAGTCTCTTATCTTTGATCTACTTCCTCGCAAATGAACATGGATACAGAAAATGAAGAAAGACATAAATGCTGCCTTCAGAAGAGCAAACTGGTGTAGCATTATTATCTTTAATTTCTGAGCAAGTTCACTGATGTTGGATTTATGACTTAATTGAACACTTCTTTTTCCCACAAGTATCAATGGAACCCAAACATGAAGCTGTAATTTTAAAAGGTGAACTTAACAATACACAACCTGCATTATTTTTAATTCTAAGAAGAATGGGGTCCACATTTTCCTGATGTTCCTATACAGTCATCTGCCCTCCCAATAATGAAAAGGAAAACACTGCTGAAAAAGGAATGAAATCTGATGTGATTGAGAAAGCAACATCGTACTTCTTACACCATTATAAAGTATAAAACAGTATCCAAGCTTTCAGATCCTCTCACTCCACTTTCAAAAACATTATAACTCTTTTATGTTCAACCACTTCTGCTAACAAATTGTACACGCTACAAAGAGTAAGTTTTCCCATCTTAATTCTAATTCTAAATCTGGAAAGGAAAGAAATAGAGGGCTGTTATTTTAGGAAATTGGGATAAAGGTGGTGGGCTATGGTGCGAGGGCTCAGAGTAGGGGCATTCAGGCTAAGTCACTGAATTCTGTTAACTGAAACAATATAGAAATATGAGATATGTCGGGGTCTTTTATTTCAAGGAGCCTAACTTGCCAGTCCAAAAGTAAGTCTAATAATGTGAGTTGTGAGGTTATTTAAGAGGGGAACTGACTCATCATTCCTTCTCATTTTGTGTTCATGTAATTTGTTTCATTGTCCTTTTGCTGGCAGTCTTTTAGTTTATCCTCACATTAAGTTGTTTAAACATTTATTACCATGTGGAATTTCAGGCACTTCCCTTTGTTGGATTTGCATTGGCGATGTTTCTTTTCTACTCATTTGTTCCCATTTTGCTGAAGGTATTGCCCCCTCTCTCAATCTCTCCGTCAATATATAAAATAAGCGATTGGCAGTCAACTATGTTCCAATCTAAATATAGTTGTGTTGCAATCTACACTATGTTGACCTGTTAAAGAAAATGATGTGGTGTTGTAGATATCATCTCATTCTTGGTTCTTGATAGTTATTTTCTGTTGATGCTCATTAGTTTTGGAGCTAGTTTTTTTTTTTTTCCATTCTAAGATGCCACCTTTTGGATGCAGAGGAGTGGTGCTACAATGCTAAATCTAGCCTTGCTTACCTCTGATATGTGGGCTGTTGTAATTCGTATCTTTGTATACCATCAGAAGGTTTGCAGAACAATCGGCTTCTTTTCATTTTGAGCACTAAAATCTATTTAAACGTGGAACTAATACATTTTCTGTGATTTATTAGTGTTGTTCTGAAATCAGTATCATGTTCTTCAGGTTGACTGGATATATTTTGTAGCTTTTGCTGCTGTTGCTGTGGGTCTTCTTATTTATTCTGGGTAAGTAACAATTTGGTTCCTGAATGGGGTTTATCTTCATTTTTTGTATAATAGCGCTTAGATTATTTTTTTGTCCATGTTTTCATAGAACTAAGAGGATAATCTAACTGTCGGTTAAGCTTTTATTTATATGATGGGAAATCCACCATATGCAGCTGATACTAAAAAGCTGAAGAAAGTTATTTACCTAAATCGGGCAATAAGGGAACTCTGCTTTCTCTCCTTAATATCTTATTACAACAGATTTCACTGTAGATGTGCTCTCTGCCCTTCATATCTCCATTTATCCTTTTCCATTAATGATAACTGCTAATATAAGACTCCAAGTGAACTGTTAATTTCTCCAGTCTGCCAATTTTTGAAATTTCTCCAATAGCTCAGGTTTCAAAAAGATTGTTCCTTTCTGTTCTTCGCAAAGCTGGGTCGTCACTGCTCTCTGCTGGTTGCATATGTTGAAAGACAGTGGCCTTGGAATGCTTCACCATGTGGGATTACCCTTTTGCTTCCAGAAGCTGATTATGGTGCCATCACTCTCTCTAAATGTTTTAACATCTTGGTAGAACTCCTTCCACAATACTCCTCCATAAAGCTACCCTTGAGAGATTTTCTGTCATCCACCCAAAACCTGTACTTCGTACTTATCCGTGATAACTCTCCTCCAACATGCCTGTTCTGCACTTAATCCTAACTTGGATTTGGATGGTTTCTGTTGATTATCAATTTAGTCTAGTTATCACAATGTAGAACATTAAAGAGTTTGTTCTTGTTCACTGATGAGACCCTTAACAGTCGAGTTGCAAATAGCAGAATATTTTTACATATTTGACTCCGTTTCAGGCGGGATAAGGTGGATAAGAACGTAGCTGATGAAGGCATTGTAAGA</genome_strand>
        <mrna_strand>GCAAAATGGTATTTTTACATCCTCCTTGGAATAGTTGATGTGGAGGCCAACTTTCTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGAAGGCTTACCAGTACACATCCTTAACAAGCGTGATGTTGCTGGATTGCTGGGCAATTCCGTGTGTTCTGCTTTTTACGTGGTTTTTCTTGAAGACAAAATACAGACCCAGAAAATTAGTTGGTGTTGCCATCTGTATTGCTGGTATTGTCCTGGTGATATTTTCAGATGTACATGCCGAAGATCGATCAA..............................................................................................................................................................................................................................................................................................GTGGTAGCAATCCTATCAAAGGGGATATACTTGTAATTGCTGGAGCCACATTATATGCCGTTAGTAATGTCAGTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTTTTTGTCAAAAGTGCTGATATGGTTGAACTCATGGCATTTCTGGGCCTTTTTGGTGCCATTGTTAGTGGTTGCCAAAT....................................................................................................................................................................AGGCATACTTGAGCGCAATGAGTTGAAGTCCATTCACTGGTCAGCTGGAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTCCCTTTGTTGGATTTGCATTGGCGATGTTTCTTTTCTACTCATTTGTTCCCATTTTGCTGAAG...................................................................................................................................................................................................................................................AGGAGTGGTGCTACAATGCTAAATCTAGCCTTGCTTACCTCTGATATGTGGGCTGTTGTAATTCGTATCTTTGTATACCATCAGAAG.....................................................................................................................GTTGACTGGATATATTTTGTAGCTTTTGCTGCTGTTGCTGTGGGTCTTCTTATTTATTCTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGATAAGGTGGATAAGAACGTACCTGATGAAGGCATTGTAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E374029" ref_strand="+" ref_description="SGN-E374029 [TUS-33-G7](-)">
      <seq>agtaatgtcagtgaggagttttttgtcaaaagtgctgatatggttgaactcatggcatttctgggcctttttggtgccattgttagtggttgccaaataggcatacttgagcgcaatgagttgaagtccattcactggtcagctggagcagcacttccctttgttggatttgcattggcgatgtttcttttctactcatttgttcccattttgctgaagaggagtggtgctacaatgctaaatctagccttgcttacctctgatatgtgggctgttgtaattcgtatctttgtataccatcagaaggttgactggatatattttgtagcttttgctgctgttgctgtgggtcttcttatttattctgggcgggataaggtggataagaacgtagctgatgaaggcattgtaagaagcaagcgatttgacgaggaaactggcctagataatcctgcacgaaaagatgccattgagagctcaagaactgaagaaagttttgacgccgaaacagtgcctggaatatacggaagataaatttattgtagttttgagactttcttttttttttttttatttcttcctctatcccctgtaggaaaggtcttattccatttgcgttaatgtgatgtagctgccaaacagtctctgtcattttacttaaataaaacttcagtatcattttatcactaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="16969" stop="20511"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17284" g_stop="17366" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="98" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17367" i_stop="17530" i_length="164">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17531" g_stop="17582" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="150" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17583" i_stop="18474" i_length="892">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18475" g_stop="18543" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="219" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18544" i_stop="18786" i_length="243">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.874" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18787" g_stop="18873" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="306" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18874" i_stop="18990" i_length="117">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18991" g_stop="19052" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="368" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="19053" i_stop="19889" i_length="837">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="19890" g_stop="20216" g_length="327"/>
          <reference_exon_boundary r_type="cDNA" r_start="369" r_stop="696" r_length="328" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E374029" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E374029" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17284" e_stop="17366"/>
          <exon e_start="17531" e_stop="17582"/>
          <exon e_start="18475" e_stop="18543"/>
          <exon e_start="18787" e_stop="18873"/>
          <exon e_start="18991" e_stop="19052"/>
          <exon e_start="19890" e_stop="20216"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTTTTTTGTCAAAAGTGCTGATATGGTTGAACTCATGGCATTTCTGGGCCTTTTTGGTGCCATTGTTAGTGGTTGCCAAATGTATCCTAATTCTCTTTAATGTTCAAAACACAATTCACACATTTGGATGATACTTGATTCAGTCATTATAAGAGCTTATAGGGTTTAAACTTCTTTCTTGATAAATCCATATTCTTTCACATGCTGATGATTTTCTGTACGCAATTTCTTTAACCATGCTACAGAGGCATACTTGAGCGCAATGAGTTGAAGTCCATTCACTGGTCAGCTGGAGCAGTAAGTCTCTTATCTTTGATCTACTTCCTCGCAAATGAACATGGATACAGAAAATGAAGAAAGACATAAATGCTGCCTTCAGAAGAGCAAACTGGTGTAGCATTATTATCTTTAATTTCTGAGCAAGTTCACTGATGTTGGATTTATGACTTAATTGAACACTTCTTTTTCCCACAAGTATCAATGGAACCCAAACATGAAGCTGTAATTTTAAAAGGTGAACTTAACAATACACAACCTGCATTATTTTTAATTCTAAGAAGAATGGGGTCCACATTTTCCTGATGTTCCTATACAGTCATCTGCCCTCCCAATAATGAAAAGGAAAACACTGCTGAAAAAGGAATGAAATCTGATGTGATTGAGAAAGCAACATCGTACTTCTTACACCATTATAAAGTATAAAACAGTATCCAAGCTTTCAGATCCTCTCACTCCACTTTCAAAAACATTATAACTCTTTTATGTTCAACCACTTCTGCTAACAAATTGTACACGCTACAAAGAGTAAGTTTTCCCATCTTAATTCTAATTCTAAATCTGGAAAGGAAAGAAATAGAGGGCTGTTATTTTAGGAAATTGGGATAAAGGTGGTGGGCTATGGTGCGAGGGCTCAGAGTAGGGGCATTCAGGCTAAGTCACTGAATTCTGTTAACTGAAACAATATAGAAATATGAGATATGTCGGGGTCTTTTATTTCAAGGAGCCTAACTTGCCAGTCCAAAAGTAAGTCTAATAATGTGAGTTGTGAGGTTATTTAAGAGGGGAACTGACTCATCATTCCTTCTCATTTTGTGTTCATGTAATTTGTTTCATTGTCCTTTTGCTGGCAGTCTTTTAGTTTATCCTCACATTAAGTTGTTTAAACATTTATTACCATGTGGAATTTCAGGCACTTCCCTTTGTTGGATTTGCATTGGCGATGTTTCTTTTCTACTCATTTGTTCCCATTTTGCTGAAGGTATTGCCCCCTCTCTCAATCTCTCCGTCAATATATAAAATAAGCGATTGGCAGTCAACTATGTTCCAATCTAAATATAGTTGTGTTGCAATCTACACTATGTTGACCTGTTAAAGAAAATGATGTGGTGTTGTAGATATCATCTCATTCTTGGTTCTTGATAGTTATTTTCTGTTGATGCTCATTAGTTTTGGAGCTAGTTTTTTTTTTTTTCCATTCTAAGATGCCACCTTTTGGATGCAGAGGAGTGGTGCTACAATGCTAAATCTAGCCTTGCTTACCTCTGATATGTGGGCTGTTGTAATTCGTATCTTTGTATACCATCAGAAGGTTTGCAGAACAATCGGCTTCTTTTCATTTTGAGCACTAAAATCTATTTAAACGTGGAACTAATACATTTTCTGTGATTTATTAGTGTTGTTCTGAAATCAGTATCATGTTCTTCAGGTTGACTGGATATATTTTGTAGCTTTTGCTGCTGTTGCTGTGGGTCTTCTTATTTATTCTGGGTAAGTAACAATTTGGTTCCTGAATGGGGTTTATCTTCATTTTTTGTATAATAGCGCTTAGATTATTTTTTTGTCCATGTTTTCATAGAACTAAGAGGATAATCTAACTGTCGGTTAAGCTTTTATTTATATGATGGGAAATCCACCATATGCAGCTGATACTAAAAAGCTGAAGAAAGTTATTTACCTAAATCGGGCAATAAGGGAACTCTGCTTTCTCTCCTTAATATCTTATTACAACAGATTTCACTGTAGATGTGCTCTCTGCCCTTCATATCTCCATTTATCCTTTTCCATTAATGATAACTGCTAATATAAGACTCCAAGTGAACTGTTAATTTCTCCAGTCTGCCAATTTTTGAAATTTCTCCAATAGCTCAGGTTTCAAAAAGATTGTTCCTTTCTGTTCTTCGCAAAGCTGGGTCGTCACTGCTCTCTGCTGGTTGCATATGTTGAAAGACAGTGGCCTTGGAATGCTTCACCATGTGGGATTACCCTTTTGCTTCCAGAAGCTGATTATGGTGCCATCACTCTCTCTAAATGTTTTAACATCTTGGTAGAACTCCTTCCACAATACTCCTCCATAAAGCTACCCTTGAGAGATTTTCTGTCATCCACCCAAAACCTGTACTTCGTACTTATCCGTGATAACTCTCCTCCAACATGCCTGTTCTGCACTTAATCCTAACTTGGATTTGGATGGTTTCTGTTGATTATCAATTTAGTCTAGTTATCACAATGTAGAACATTAAAGAGTTTGTTCTTGTTCACTGATGAGACCCTTAACAGTCGAGTTGCAAATAGCAGAATATTTTTACATATTTGACTCCGTTTCAGGCGGGATAAGGTGGATAAGAACGTAGCTGATGAAGGCATTGTAAGAAGCAAGCGATTTGACGAGGAAACTGGCCTAGATAATCCTGCACGAAAAGATGCCATTGAGAGCTCAAGAACTGAAGAAAGTTTTGACGCCGAAACAGTGCCTGGAATATACGGAAGATAAATTTATTGTAGTTTTGAGACTTTC-TTTTTTTTTTTTTATTTCTTCCTCTATCCCCTGTAGGAAAGGTCTTATTCCATTTGCGTTAATGTGATGTAGCTGCCAAACAGTCTCTGTCATTTTACTTAAATAAAACTTCAGTATCATTTTATCACTACACCTCA</genome_strand>
        <mrna_strand>GAGTTTTTTGTCAAAAGTGCTGATATGGTTGAACTCATGGCATTTCTGGGCCTTTTTGGTGCCATTGTTAGTGGTTGCCAAAT....................................................................................................................................................................AGGCATACTTGAGCGCAATGAGTTGAAGTCCATTCACTGGTCAGCTGGAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTCCCTTTGTTGGATTTGCATTGGCGATGTTTCTTTTCTACTCATTTGTTCCCATTTTGCTGAAG...................................................................................................................................................................................................................................................AGGAGTGGTGCTACAATGCTAAATCTAGCCTTGCTTACCTCTGATATGTGGGCTGTTGTAATTCGTATCTTTGTATACCATCAGAAG.....................................................................................................................GTTGACTGGATATATTTTGTAGCTTTTGCTGCTGTTGCTGTGGGTCTTCTTATTTATTCTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGATAAGGTGGATAAGAACGTAGCTGATGAAGGCATTGTAAGAAGCAAGCGATTTGACGAGGAAACTGGCCTAGATAATCCTGCACGAAAAGATGCCATTGAGAGCTCAAGAACTGAAGAAAGTTTTGACGCCGAAACAGTGCCTGGAATATACGGAAGATAAATTTATTGTAGTTTTGAGACTTTCTTTTTTTTTTTTTTATTTCTTCCTCTATCCCCTGTAGGAAAGGTCTTATTCCATTTGCGTTAATGTGATGTAGCTGCCAAACAGTCTCTGTCATTTTACTTAAATAAAACTTCAGTATCATTTTATCACTAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E349343" ref_strand="+" ref_description="SGN-E349343 [cTOS-1-E2]">
      <seq>tttaaagttcttgctgagcatcaattggcccatcctgatgaagaaggtatgccaataaacaacctgtacagtacgtgccgagaacggttcttggtgagcagtcaagttactttgaattcacatttgacagaatttaaagaccatgagttgatcaaaaccaaaagaaattctgatggtcaagattgcctttgtattcctctcacaaatgaagcccttcagaaacttatagcagatatcgtttgatagagcttccaatacaagaagagaaatcactcagcagcaaatttgaagcagcagaggcatgtttaatttaatgtatgacaaacttcatgtataaaaaagtgcacatcttttcacttgtgcataggagttggcctgatcctcagctggcttttactcaacatgctaggatatctattaaatatggttaacttatcaagcatctcacagagagagcaatatgaccggaatgtattcagtttgtggctttgttagatcctcatgtaatctgcttggaatgtgttggtgtttcttaatgtattttaagaagattacacaatttaactaattagtgattattatatttcaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="21337" stop="20038"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21037" g_stop="20992" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20991" i_stop="20880" i_length="112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.879" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20879" g_stop="20333" g_length="547"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="593" r_length="547" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E349343" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>593</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349343" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21037" e_stop="20992"/>
          <exon e_start="20879" e_stop="20333"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAAAGTTCTTGCTGAGCATCAATTGGCCCATCCTGATGAAGAAGGTAAGTGCTTTCATACTTTGCTTTCCCATTTCTATCTCCATTTCCATGCATGTTGATGCAATTAGGTCTATGCCTTTAGTCATACCTTAAAGCTGGACATGCTTCTTATTAGGTATGCCAATAAACAACCTGTACAGTACGTGCCGAGAACGGTTCTTGGTGAGCAGTCAAGTTACTTTGAATTCACATTTGACAGAATTTAAAGACCATGAGTTGATCAAAACCAAAAGAAATTCTGATGGTCAAGATTGCCTTTGTATTCCTCTCACAAATGAAGCCCTTCAGAAACTTATAGCAGATATCGTTTGATAGAGCTTCCAATACAAGAAGAGAAATCACTCAGCAGCAAATTTGAAGCAGCAGAGGCATGTTTAATTTAATGTATGACAAACTTCATGTATAAAAAAGTGCACATCTTTTCACTTGTGCATAGGAGTTGGCCTGATCCTCAGCTGGCTTTTACTCAACATGCTAGGATATCTATTAAATATGGTTAACTTATCAAGCATCTCACAGAGAGAGCAATATGACCGGAATGTATTCAGTTTGTGGCTTTGTTAGATCCTCATGTAATCTGCTTGGAATGTGTTGGTGTTTCTTAATGTATTTTAAGAAGATTACACAATTTAACTAATTAGTGATTATTATATTTCAGCTGT</genome_strand>
        <mrna_strand>TTTAAAGTTCTTGCTGAGCATCAATTGGCCCATCCTGATGAAGAAG................................................................................................................GTATGCCAATAAACAACCTGTACAGTACGTGCCGAGAACGGTTCTTGGTGAGCAGTCAAGTTACTTTGAATTCACATTTGACAGAATTTAAAGACCATGAGTTGATCAAAACCAAAAGAAATTCTGATGGTCAAGATTGCCTTTGTATTCCTCTCACAAATGAAGCCCTTCAGAAACTTATAGCAGATATCGTTTGATAGAGCTTCCAATACAAGAAGAGAAATCACTCAGCAGCAAATTTGAAGCAGCAGAGGCATGTTTAATTTAATGTATGACAAACTTCATGTATAAAAAAGTGCACATCTTTTCACTTGTGCATAGGAGTTGGCCTGATCCTCAGCTGGCTTTTACTCAACATGCTAGGATATCTATTAAATATGGTTAACTTATCAAGCATCTCACAGAGAGAGCAATATGACCGGAATGTATTCAGTTTGTGGCTTTGTTAGATCCTCATGTAATCTGCTTGGAATGTGTTGGTGTTTCTTAATGTATTTTAAGAAGATTACACAATTTAACTAATTAGTGATTATTATATTTCAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E395857" ref_strand="+" ref_description="SGN-E395857 [TUS-18-C9](-)">
      <seq>tgatcctcagcgggcttttactcaacatgctaggatatctattaaatatggttaacttatcaagcatataacagagagagcaatctcaccggaatgtattcagtttgtggctttgttagatcctcatgtaatctgcttgaaaggtgtcggtgtttcttaatgtattttaagaagattacaaaagggaactaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="20849" stop="20067"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20549" g_stop="20349" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="201" r_length="201" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E395857" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>201</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E395857" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20549" e_stop="20349"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATCCTCAGCTGGCTTTTACTCAACATGCTAGGATATCTATTAAATATGGTTAACTTATCAAGCATCTCACAGAGAGAGCAATATGACCGGAATGTATTCAGTTTGTGGCTTTGTTAGATCCTCATGTAATCTGCTTGGAATGTGTTGGTGTTTCTTAATGTATTTTAAGAAGATTACACAATTTAACTAATTAGTGATT</genome_strand>
        <mrna_strand>TGATCCTCAGCGGGCTTTTACTCAACATGCTAGGATATCTATTAAATATGGTTAACTTATCAAGCATATAACAGAGAGAGCAATCTCACCGGAATGTATTCAGTTTGTGGCTTTGTTAGATCCTCATGTAATCTGCTTGAAAGGTGTCGGTGTTTCTTAATGTATTTTAAGAAGATTACAAAAGGGAACTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E235787" ref_strand="+" ref_description="SGN-E235787 [cLED-15-C8]">
      <seq>ttgatcagtagctaccaaagtttatattcaaaatggctttttgtgctaaggagcggctttgcacttttgatgtatggatttggatcaaagaaagctttgattgaagattttgcctcaaaatctttgactgagtactctgtcatagtcgtcaacgggtatctccaatctataaatcttaaacaggtggtgataacactggctgagctcctctgggatcaagtaaaattgcgacaaaagactacctcaggaagtctgtgtaaaagccaacaaccatttaacactagatccatgtctgaccttcttacttttctagacagtccagacctagaagtcgaggactgttacggttgcatccttgtcacaacattgatggtcctggattacgtgattctgacagccaacaatgtgttgcaagcattgctgcttgttctcatgttcgtatggctgcttccattgaccatgtcaacgctcctcttttgtgggacaagacgatggttcatacacaatttgactggtactggtgccatgttcctac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="23186" stop="20862"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22886" g_stop="22837" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22836" i_stop="22699" i_length="138">
            <donor d_prob="0.654" d_score="1.00"/>
            <acceptor a_prob="0.861" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22698" g_stop="22566" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="183" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22565" i_stop="21842" i_length="724">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21841" g_stop="21547" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="477" r_length="294" r_score="0.980"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21546" i_stop="21220" i_length="327">
            <donor d_prob="0.717" d_score="0.98"/>
            <acceptor a_prob="0.797" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21219" g_stop="21162" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="478" r_stop="535" r_length="58" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E235787" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E235787" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22886" e_stop="22837"/>
          <exon e_start="22698" e_stop="22566"/>
          <exon e_start="21841" e_stop="21547"/>
          <exon e_start="21219" e_stop="21162"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATCAGTAGCTACCAAAGTTTATATTCAAAATGGCTTTTTGTGCTAAGGTCAGAGTCCTGATGTATCGGTTTACTCTATGCTATCCTTTTTTAATAAGTTTTTTTTATTTGCCTTTTTTCCATTATCTATCAAATTTAAACCAGGAAGGTTTTCCTTACTAATTTTCTTTTAATTTAATCTGATAGGAGCGGCTTTGCACTTTTGATGTATGGATTTGGATCAAAGAAAGCTTTGATTGAAGATTTTGCCTCAAAATCTTTGACTGAGTACTCTGTCATAGTCGTCAACGGGTATCTCCAATCTATAAATCTTAAACAGGTATTCGTCTACTGTTTTCTTCCTTGTTTAATTATTGTGCTTTCTTGGTACCTATATTTTAAAAATATTGTGTAGAAAGTCTCAAAATCCTCTGTGCAAATTTTGTGAAAAATGATGTTATAGGCATGTATATCAGGTCTAGATAGCTTACTACATGAGCTGTGTTTGGTTTGGTTGCAAGCTTCCTACTTTAGTGCGTTACAGGCTCTCTGGCATGGATTTTTAATTTAGCGCTGACAATATTTTGAAGATTATTGTTATATGTTATAACAGTGCTAATGGCTTTAATAAGGGGCCTATGACTGAAGATTTCACATTGGCTTGCCCAATAAGATGGTTATGCCCAGACTTCACAATCCTAGAACAATTGAAATAGAATTCAAGTGGTTGAAAATAATTCCGAACGCTCCTTTTCTCTTGGTCTGATGGAGGCTATCAATGCTTGAAACATCAATAACTGTATACACAATTCATGTGATTCTTGGTGCATAGTCACTGGGACTTAATATGGCAATAGTAATTCCTTTTTCTTAAGTTCCTATGCTTGTTCATAATATCACTTGTTCATAATATCAACAATTACTGCAGCTCTGACCACTCCCTTATTGTGATATCATATGCCAAAGATCTCCATGGGAAGCACATTTGACATTACGCATGTTGCTGGTGCACAATCTTTCTGAGTAATACTAAGAGATCTGCTATTGTTGATTTATAATTTCAGGTGGTGATAACACTGGCTGAGCTCCTCTGGGATCAAGTAAAATTGCGACAAAAGACTACCTCAGGAAGTCTGTGTAAAAGCCAACAACCATTTAACACTAGATCCATGTCTGACCTTCTTACTTTTCTAGACAGTCCAGACCTAGAAGTCGAGGACTGTTTTGTTTGCATTCTTGTTCACAACATTGATGGTCCTGGATTACGTGATTCTGACAGCCAACAATGTGTTGCAAGCATTGCTGCTTGTTCTCATGTTCGTATGGTTGCTTCCATTGACCATGTCAACGCTCCTCTTTGTAAGAGCTCTCTGAACACCTGTGTGAGCGTTTATATAATTGGATACAGGAGTATTTGTGGAGATCTTTTCTCCGTGTGTTGCATGTACTAGTGCATTTTACTAATTTTACGTGTTTTAAGAGTTTTTAGGTGTAGTTACTTTTGCAAATTGCTGCTTGAATGTAAATATATATCACTTTAACTATACCATCTGATGCTGAAGTGTCAAATTCTAGTCATTTCCCTTAATAATGTAACTTGGGCTGGTGTTTGAACTCTTGTTTATTATTTGCATGTCACATTCAAAAAGGTCTTATATTTGCTTTATTGGCTGTCGTATATGCCAGTGTGGGACAAGAAGATGGTTCATACACAATTTGACTGGTACTGGTGCCATGTTCCTAC</genome_strand>
        <mrna_strand>TTGATCAGTAGCTACCAAAGTTTATATTCAAAATGGCTTTTTGTGCTAAG..........................................................................................................................................GAGCGGCTTTGCACTTTTGATGTATGGATTTGGATCAAAGAAAGCTTTGATTGAAGATTTTGCCTCAAAATCTTTGACTGAGTACTCTGTCATAGTCGTCAACGGGTATCTCCAATCTATAAATCTTAAACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGATAACACTGGCTGAGCTCCTCTGGGATCAAGTAAAATTGCGACAAAAGACTACCTCAGGAAGTCTGTGTAAAAGCCAACAACCATTTAACACTAGATCCATGTCTGACCTTCTTACTTTTCTAGACAGTCCAGACCTAGAAGTCGAGGACTGTTACGGTTGCATCCTTG-TCACAACATTGATGGTCCTGGATTACGTGATTCTGACAGCCAACAATGTGTTGCAAGCATTGCTGCTTGTTCTCATGTTCGTATGGCTGCTTCCATTGACCATGTCAACGCTCCTCTTT.......................................................................................................................................................................................................................................................................................................................................TGTGGGACAAGACGATGGTTCATACACAATTTGACTGGTACTGGTGCCATGTTCCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343081" ref_strand="+" ref_description="SGN-E343081 [cTOF-11-F24]">
      <seq>gcagccctaagtttcttcctaagtctccggcagagtcgccgggaaatagaccggagagagcagggggacgatgagagtatacaattttggagtctagaacttgtgtcaacttgtgcttgttaatttacagagtcttaatatttcatatttttactgaaatggatgtagacgagattgaggaagaggagtttggattctcgagaaactatttccttgctaaagaattgggctcttcttcaaggaaaaaatctgctcggaagctttcagaaatcgatctcgttgacgaagaggaattaagagaggtggcagctagtattgagcccaaacatgagaaagaagttaatgagttgatcagtagctaccaaagtttatattcaaaatggctttttgtgctaaggagcggctttgcacttttgatgtatggattttggatcaaagaaagctttgattgaagattttgcctcaaaatctttgactgagtactctgtcatagtcgtcaacgggtatctccaatctataaatcttaaacaggtggtgataacactggctgagctcctctgggatcaagtaaaattgcgacaaaagactacctcangaagtctgtgtaaaagccaacaaccatttaacactagatccatgtctgaccttcttacttttctagacagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="24373" stop="21407"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24073" g_stop="23784" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="290" r_length="290" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23783" i_stop="22944" i_length="840">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22943" g_stop="22837" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="397" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22836" i_stop="22699" i_length="138">
            <donor d_prob="0.654" d_score="1.00"/>
            <acceptor a_prob="0.861" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22698" g_stop="22566" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="531" r_length="134" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="22565" i_stop="21842" i_length="724">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21841" g_stop="21707" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="532" r_stop="666" r_length="135" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E343081" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>665</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E343081" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24073" e_stop="23784"/>
          <exon e_start="22943" e_stop="22837"/>
          <exon e_start="22698" e_stop="22566"/>
          <exon e_start="21841" e_stop="21707"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGCCCTAAGTTTCTTCCTAAGTCTCCGGCAGAGTCGCCGGGAAATAGACCGGAGAGAGCAGGGGGACGATGAGAGTATACAATTTTGGAGTCTAGAACTTGTGTCAACTTGTGCTTGTTAATTTACAGAGTCTTAATATTTCATATTTTTACTGAAATGGATGTAGACGAGATTGAGGAAGAGGAGTTTGGATTCTCGAGAAACTATTTCCTTGCTAAAGAATTGGGCTCTTCTTCAAGGAAAAAATCTGCTCGGAAGCTTTCAGAAATCGATCTCGTTGACGAAGAGGTTTGTGTTTTGACTCTTATTATTGTTCAACTGTATGTACAGCTTGAGCTGATTGCGCCAACTGTTCGAACACTACATTCGTGTGCTGTAGTCTTTGGCATTAGTGGCCTGAGCATATGTATTGGTTATTGTGCTATGGTTTTTTTTGATAGACTGTCTTTTGATTGTTTGTTCTGTGATCGACTGTATAACCAAAAATTTTGACATCGAGCTATCTAATGTTTGCCAATTCTTTATGTTACAAAGACTCTTCTTTTATAGTATATAGCATAGTCACTTCCTGCAAAAAACTAGGAGAAAAAGAGTATCCCTTAAGAGAATACCTTTGCTAACCCAAATAGATTGGATGATTCATTCAAGTAATTGTTAACACTTGATGAAATATTTGAGAACATGCCCCGCTTATCCTATACACTATGTTTCAATCAATTCTACTACCGTGTGTAGACGTACAGTAGTGACATTTTCTTCTTTTTTGTCATCATGACACATAATATTTCAGATAAGCGTTAGGGCAGATTTGTGATTTTTGTTAACCGCCATTTCATGTTTATCAGTGTCCTAAGATGTTAGACAAAATTTGTGATTTTTGTGATTAAGGAGAAAAGAAGGGCTGATTACTCATTGGATTTCCAATAAGTGCTTGAAGGTACATTTACCAAAGAGATGGACTACCTCATAATGTGGTCTGTGATCATTCAAATGATAAATCAATGGAAAAAGGCCATTGTACTATACCCTCAAAGATGAGGGTTTATGCACCATCTCCAAATCATACTATTTGTCCATGTTGTGCTCAAACATAAGAAAGAAGTCCATAAAAATTATTGTTGCATGCAGGAATTAAGAGAGGTGGCAGCTAGTATTGAGCCCAAACATGAGAAAGAAGTTAATGAGTTGATCAGTAGCTACCAAAGTTTATATTCAAAATGGCTTTTTGTGCTAAGGTCAGAGTCCTGATGTATCGGTTTACTCTATGCTATCCTTTTTTAATAAGTTTTTTTTATTTGCCTTTTTTCCATTATCTATCAAATTTAAACCAGGAAGGTTTTCCTTACTAATTTTCTTTTAATTTAATCTGATAGGAGCGGCTTTGCACTTTTGATGTATGGA-TTTGGATCAAAGAAAGCTTTGATTGAAGATTTTGCCTCAAAATCTTTGACTGAGTACTCTGTCATAGTCGTCAACGGGTATCTCCAATCTATAAATCTTAAACAGGTATTCGTCTACTGTTTTCTTCCTTGTTTAATTATTGTGCTTTCTTGGTACCTATATTTTAAAAATATTGTGTAGAAAGTCTCAAAATCCTCTGTGCAAATTTTGTGAAAAATGATGTTATAGGCATGTATATCAGGTCTAGATAGCTTACTACATGAGCTGTGTTTGGTTTGGTTGCAAGCTTCCTACTTTAGTGCGTTACAGGCTCTCTGGCATGGATTTTTAATTTAGCGCTGACAATATTTTGAAGATTATTGTTATATGTTATAACAGTGCTAATGGCTTTAATAAGGGGCCTATGACTGAAGATTTCACATTGGCTTGCCCAATAAGATGGTTATGCCCAGACTTCACAATCCTAGAACAATTGAAATAGAATTCAAGTGGTTGAAAATAATTCCGAACGCTCCTTTTCTCTTGGTCTGATGGAGGCTATCAATGCTTGAAACATCAATAACTGTATACACAATTCATGTGATTCTTGGTGCATAGTCACTGGGACTTAATATGGCAATAGTAATTCCTTTTTCTTAAGTTCCTATGCTTGTTCATAATATCACTTGTTCATAATATCAACAATTACTGCAGCTCTGACCACTCCCTTATTGTGATATCATATGCCAAAGATCTCCATGGGAAGCACATTTGACATTACGCATGTTGCTGGTGCACAATCTTTCTGAGTAATACTAAGAGATCTGCTATTGTTGATTTATAATTTCAGGTGGTGATAACACTGGCTGAGCTCCTCTGGGATCAAGTAAAATTGCGACAAAAGACTACCTCAGGAAGTCTGTGTAAAAGCCAACAACCATTTAACACTAGATCCATGTCTGACCTTCTTACTTTTCTAGACAGT</genome_strand>
        <mrna_strand>GCAGCCCTAAGTTTCTTCCTAAGTCTCCGGCAGAGTCGCCGGGAAATAGACCGGAGAGAGCAGGGGGACGATGAGAGTATACAATTTTGGAGTCTAGAACTTGTGTCAACTTGTGCTTGTTAATTTACAGAGTCTTAATATTTCATATTTTTACTGAAATGGATGTAGACGAGATTGAGGAAGAGGAGTTTGGATTCTCGAGAAACTATTTCCTTGCTAAAGAATTGGGCTCTTCTTCAAGGAAAAAATCTGCTCGGAAGCTTTCAGAAATCGATCTCGTTGACGAAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTAAGAGAGGTGGCAGCTAGTATTGAGCCCAAACATGAGAAAGAAGTTAATGAGTTGATCAGTAGCTACCAAAGTTTATATTCAAAATGGCTTTTTGTGCTAAG..........................................................................................................................................GAGCGGCTTTGCACTTTTGATGTATGGATTTTGGATCAAAGAAAGCTTTGATTGAAGATTTTGCCTCAAAATCTTTGACTGAGTACTCTGTCATAGTCGTCAACGGGTATCTCCAATCTATAAATCTTAAACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGATAACACTGGCTGAGCTCCTCTGGGATCAAGTAAAATTGCGACAAAAGACTACCTCANGAAGTCTGTGTAAAAGCCAACAACCATTTAACACTAGATCCATGTCTGACCTTCTTACTTTTCTAGACAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E305929" ref_strand="+" ref_description="SGN-E305929 [cLEY-17-N4]">
      <seq>ggaaatagaccggagagagcagggggacgatgagagtatacaattttggagtctagaacttgtgtcaacttgtgcttgttaatttacagagtcttaatatttcatatttttactgaaatggatgtagacgagattgaggaagaggagtttggattctcgagaaactatttccttgctaaagaattgggctcttcttcaaggaaaaaatctgctcggaagctttcagaaatcgatctcgttgacgaagaggaattaagagaggtggcagctagtattgagcccaaacatgagaaagaagttaatgagttgatcagtagctaccaaagtttatattcaaaatggctttttgtgctaaggagcggctttgcacttttgatgtatggatttggatcaaagaaagctttgattgaagattttgcctcaaaatctttgactgagtactctgtcatagtcgtcaacgggtatctccaatctataaatcttaaacaggtggtgataacactggctgagctcctctgggatcaagtaaaattgcgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="24332" stop="21493"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24032" g_stop="23784" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="249" r_length="249" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23783" i_stop="22944" i_length="840">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22943" g_stop="22837" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="356" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22836" i_stop="22699" i_length="138">
            <donor d_prob="0.654" d_score="1.00"/>
            <acceptor a_prob="0.861" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22698" g_stop="22566" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="489" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="22565" i_stop="21842" i_length="724">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21841" g_stop="21793" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="538" r_length="49" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E305929" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>538</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E305929" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24032" e_stop="23784"/>
          <exon e_start="22943" e_stop="22837"/>
          <exon e_start="22698" e_stop="22566"/>
          <exon e_start="21841" e_stop="21793"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAATAGACCGGAGAGAGCAGGGGGACGATGAGAGTATACAATTTTGGAGTCTAGAACTTGTGTCAACTTGTGCTTGTTAATTTACAGAGTCTTAATATTTCATATTTTTACTGAAATGGATGTAGACGAGATTGAGGAAGAGGAGTTTGGATTCTCGAGAAACTATTTCCTTGCTAAAGAATTGGGCTCTTCTTCAAGGAAAAAATCTGCTCGGAAGCTTTCAGAAATCGATCTCGTTGACGAAGAGGTTTGTGTTTTGACTCTTATTATTGTTCAACTGTATGTACAGCTTGAGCTGATTGCGCCAACTGTTCGAACACTACATTCGTGTGCTGTAGTCTTTGGCATTAGTGGCCTGAGCATATGTATTGGTTATTGTGCTATGGTTTTTTTTGATAGACTGTCTTTTGATTGTTTGTTCTGTGATCGACTGTATAACCAAAAATTTTGACATCGAGCTATCTAATGTTTGCCAATTCTTTATGTTACAAAGACTCTTCTTTTATAGTATATAGCATAGTCACTTCCTGCAAAAAACTAGGAGAAAAAGAGTATCCCTTAAGAGAATACCTTTGCTAACCCAAATAGATTGGATGATTCATTCAAGTAATTGTTAACACTTGATGAAATATTTGAGAACATGCCCCGCTTATCCTATACACTATGTTTCAATCAATTCTACTACCGTGTGTAGACGTACAGTAGTGACATTTTCTTCTTTTTTGTCATCATGACACATAATATTTCAGATAAGCGTTAGGGCAGATTTGTGATTTTTGTTAACCGCCATTTCATGTTTATCAGTGTCCTAAGATGTTAGACAAAATTTGTGATTTTTGTGATTAAGGAGAAAAGAAGGGCTGATTACTCATTGGATTTCCAATAAGTGCTTGAAGGTACATTTACCAAAGAGATGGACTACCTCATAATGTGGTCTGTGATCATTCAAATGATAAATCAATGGAAAAAGGCCATTGTACTATACCCTCAAAGATGAGGGTTTATGCACCATCTCCAAATCATACTATTTGTCCATGTTGTGCTCAAACATAAGAAAGAAGTCCATAAAAATTATTGTTGCATGCAGGAATTAAGAGAGGTGGCAGCTAGTATTGAGCCCAAACATGAGAAAGAAGTTAATGAGTTGATCAGTAGCTACCAAAGTTTATATTCAAAATGGCTTTTTGTGCTAAGGTCAGAGTCCTGATGTATCGGTTTACTCTATGCTATCCTTTTTTAATAAGTTTTTTTTATTTGCCTTTTTTCCATTATCTATCAAATTTAAACCAGGAAGGTTTTCCTTACTAATTTTCTTTTAATTTAATCTGATAGGAGCGGCTTTGCACTTTTGATGTATGGATTTGGATCAAAGAAAGCTTTGATTGAAGATTTTGCCTCAAAATCTTTGACTGAGTACTCTGTCATAGTCGTCAACGGGTATCTCCAATCTATAAATCTTAAACAGGTATTCGTCTACTGTTTTCTTCCTTGTTTAATTATTGTGCTTTCTTGGTACCTATATTTTAAAAATATTGTGTAGAAAGTCTCAAAATCCTCTGTGCAAATTTTGTGAAAAATGATGTTATAGGCATGTATATCAGGTCTAGATAGCTTACTACATGAGCTGTGTTTGGTTTGGTTGCAAGCTTCCTACTTTAGTGCGTTACAGGCTCTCTGGCATGGATTTTTAATTTAGCGCTGACAATATTTTGAAGATTATTGTTATATGTTATAACAGTGCTAATGGCTTTAATAAGGGGCCTATGACTGAAGATTTCACATTGGCTTGCCCAATAAGATGGTTATGCCCAGACTTCACAATCCTAGAACAATTGAAATAGAATTCAAGTGGTTGAAAATAATTCCGAACGCTCCTTTTCTCTTGGTCTGATGGAGGCTATCAATGCTTGAAACATCAATAACTGTATACACAATTCATGTGATTCTTGGTGCATAGTCACTGGGACTTAATATGGCAATAGTAATTCCTTTTTCTTAAGTTCCTATGCTTGTTCATAATATCACTTGTTCATAATATCAACAATTACTGCAGCTCTGACCACTCCCTTATTGTGATATCATATGCCAAAGATCTCCATGGGAAGCACATTTGACATTACGCATGTTGCTGGTGCACAATCTTTCTGAGTAATACTAAGAGATCTGCTATTGTTGATTTATAATTTCAGGTGGTGATAACACTGGCTGAGCTCCTCTGGGATCAAGTAAAATTGCGAC</genome_strand>
        <mrna_strand>GGAAATAGACCGGAGAGAGCAGGGGGACGATGAGAGTATACAATTTTGGAGTCTAGAACTTGTGTCAACTTGTGCTTGTTAATTTACAGAGTCTTAATATTTCATATTTTTACTGAAATGGATGTAGACGAGATTGAGGAAGAGGAGTTTGGATTCTCGAGAAACTATTTCCTTGCTAAAGAATTGGGCTCTTCTTCAAGGAAAAAATCTGCTCGGAAGCTTTCAGAAATCGATCTCGTTGACGAAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTAAGAGAGGTGGCAGCTAGTATTGAGCCCAAACATGAGAAAGAAGTTAATGAGTTGATCAGTAGCTACCAAAGTTTATATTCAAAATGGCTTTTTGTGCTAAG..........................................................................................................................................GAGCGGCTTTGCACTTTTGATGTATGGATTTGGATCAAAGAAAGCTTTGATTGAAGATTTTGCCTCAAAATCTTTGACTGAGTACTCTGTCATAGTCGTCAACGGGTATCTCCAATCTATAAATCTTAAACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGATAACACTGGCTGAGCTCCTCTGGGATCAAGTAAAATTGCGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E209101" ref_strand="+" ref_description="SGN-E209101 [cLEC-38-I3]">
      <seq>acgatgagagtatacaattttggagtctagaacttgtgtcaacttgtgcttgttaatttacagagtcttaatatttcatatttttactgaaatggatgtagacgagattgaggaagaggagtttggattctcgagaaactatttccttgctaaagaattgggctcttcttcaaggaaaaaatctgctcggaagctttcagaaatcgatctcgttgacgaagaggaattaagagaggtggcagctagtattgagcccaaacatgagaaagaagttaatgagttgatcagtagctaccaaagtttatattcaaaatggctttttgtgctaaggagcggctttgcacttttgatgtatggatttggatcaaagaaagctttgattgaagattttgcctcaaaatctttgactgagtactctgtcatagtcgtcaacgggtatctccaatctataaatcttaaacaggtggtgataacactggctgagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="24306" stop="21520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24006" g_stop="23784" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="223" r_length="223" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23783" i_stop="22944" i_length="840">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22943" g_stop="22837" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="330" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22836" i_stop="22699" i_length="138">
            <donor d_prob="0.654" d_score="1.00"/>
            <acceptor a_prob="0.861" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22698" g_stop="22566" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="463" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="22565" i_stop="21842" i_length="724">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21841" g_stop="21820" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="485" r_length="22" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E209101" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>485</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E209101" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24006" e_stop="23784"/>
          <exon e_start="22943" e_stop="22837"/>
          <exon e_start="22698" e_stop="22566"/>
          <exon e_start="21841" e_stop="21820"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGATGAGAGTATACAATTTTGGAGTCTAGAACTTGTGTCAACTTGTGCTTGTTAATTTACAGAGTCTTAATATTTCATATTTTTACTGAAATGGATGTAGACGAGATTGAGGAAGAGGAGTTTGGATTCTCGAGAAACTATTTCCTTGCTAAAGAATTGGGCTCTTCTTCAAGGAAAAAATCTGCTCGGAAGCTTTCAGAAATCGATCTCGTTGACGAAGAGGTTTGTGTTTTGACTCTTATTATTGTTCAACTGTATGTACAGCTTGAGCTGATTGCGCCAACTGTTCGAACACTACATTCGTGTGCTGTAGTCTTTGGCATTAGTGGCCTGAGCATATGTATTGGTTATTGTGCTATGGTTTTTTTTGATAGACTGTCTTTTGATTGTTTGTTCTGTGATCGACTGTATAACCAAAAATTTTGACATCGAGCTATCTAATGTTTGCCAATTCTTTATGTTACAAAGACTCTTCTTTTATAGTATATAGCATAGTCACTTCCTGCAAAAAACTAGGAGAAAAAGAGTATCCCTTAAGAGAATACCTTTGCTAACCCAAATAGATTGGATGATTCATTCAAGTAATTGTTAACACTTGATGAAATATTTGAGAACATGCCCCGCTTATCCTATACACTATGTTTCAATCAATTCTACTACCGTGTGTAGACGTACAGTAGTGACATTTTCTTCTTTTTTGTCATCATGACACATAATATTTCAGATAAGCGTTAGGGCAGATTTGTGATTTTTGTTAACCGCCATTTCATGTTTATCAGTGTCCTAAGATGTTAGACAAAATTTGTGATTTTTGTGATTAAGGAGAAAAGAAGGGCTGATTACTCATTGGATTTCCAATAAGTGCTTGAAGGTACATTTACCAAAGAGATGGACTACCTCATAATGTGGTCTGTGATCATTCAAATGATAAATCAATGGAAAAAGGCCATTGTACTATACCCTCAAAGATGAGGGTTTATGCACCATCTCCAAATCATACTATTTGTCCATGTTGTGCTCAAACATAAGAAAGAAGTCCATAAAAATTATTGTTGCATGCAGGAATTAAGAGAGGTGGCAGCTAGTATTGAGCCCAAACATGAGAAAGAAGTTAATGAGTTGATCAGTAGCTACCAAAGTTTATATTCAAAATGGCTTTTTGTGCTAAGGTCAGAGTCCTGATGTATCGGTTTACTCTATGCTATCCTTTTTTAATAAGTTTTTTTTATTTGCCTTTTTTCCATTATCTATCAAATTTAAACCAGGAAGGTTTTCCTTACTAATTTTCTTTTAATTTAATCTGATAGGAGCGGCTTTGCACTTTTGATGTATGGATTTGGATCAAAGAAAGCTTTGATTGAAGATTTTGCCTCAAAATCTTTGACTGAGTACTCTGTCATAGTCGTCAACGGGTATCTCCAATCTATAAATCTTAAACAGGTATTCGTCTACTGTTTTCTTCCTTGTTTAATTATTGTGCTTTCTTGGTACCTATATTTTAAAAATATTGTGTAGAAAGTCTCAAAATCCTCTGTGCAAATTTTGTGAAAAATGATGTTATAGGCATGTATATCAGGTCTAGATAGCTTACTACATGAGCTGTGTTTGGTTTGGTTGCAAGCTTCCTACTTTAGTGCGTTACAGGCTCTCTGGCATGGATTTTTAATTTAGCGCTGACAATATTTTGAAGATTATTGTTATATGTTATAACAGTGCTAATGGCTTTAATAAGGGGCCTATGACTGAAGATTTCACATTGGCTTGCCCAATAAGATGGTTATGCCCAGACTTCACAATCCTAGAACAATTGAAATAGAATTCAAGTGGTTGAAAATAATTCCGAACGCTCCTTTTCTCTTGGTCTGATGGAGGCTATCAATGCTTGAAACATCAATAACTGTATACACAATTCATGTGATTCTTGGTGCATAGTCACTGGGACTTAATATGGCAATAGTAATTCCTTTTTCTTAAGTTCCTATGCTTGTTCATAATATCACTTGTTCATAATATCAACAATTACTGCAGCTCTGACCACTCCCTTATTGTGATATCATATGCCAAAGATCTCCATGGGAAGCACATTTGACATTACGCATGTTGCTGGTGCACAATCTTTCTGAGTAATACTAAGAGATCTGCTATTGTTGATTTATAATTTCAGGTGGTGATAACACTGGCTGAGC</genome_strand>
        <mrna_strand>ACGATGAGAGTATACAATTTTGGAGTCTAGAACTTGTGTCAACTTGTGCTTGTTAATTTACAGAGTCTTAATATTTCATATTTTTACTGAAATGGATGTAGACGAGATTGAGGAAGAGGAGTTTGGATTCTCGAGAAACTATTTCCTTGCTAAAGAATTGGGCTCTTCTTCAAGGAAAAAATCTGCTCGGAAGCTTTCAGAAATCGATCTCGTTGACGAAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTAAGAGAGGTGGCAGCTAGTATTGAGCCCAAACATGAGAAAGAAGTTAATGAGTTGATCAGTAGCTACCAAAGTTTATATTCAAAATGGCTTTTTGTGCTAAG..........................................................................................................................................GAGCGGCTTTGCACTTTTGATGTATGGATTTGGATCAAAGAAAGCTTTGATTGAAGATTTTGCCTCAAAATCTTTGACTGAGTACTCTGTCATAGTCGTCAACGGGTATCTCCAATCTATAAATCTTAAACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGATAACACTGGCTGAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E200435" ref_strand="+" ref_description="SGN-E200435 [cLEB-8-B7]">
      <seq>gcacgagcctaagtctccggcagagtcgccgggaaatagaccggagagagcagggggacgatgagagtatacaattttggagtctagaacttgtgtcaacttgtgcttgttaatttacagagtcttaatatttcatatttttactgaaatggatgtagacgagattgaggaagaggagtttggattctcgagaaactatttccttgctaaagaattgggctcttcttcaaggaaaaaatctgctcggaagctttcagaaatcgatctcgttgacgaagaggaattaagagaggtggcagctagtattgagcccaaacatgagaaagaagttaatgagttgatcagtagctaccaaagtttatattcaaaatggctttttgtgctaaggagcggctttgcacttttgatgtatggatttggatcaaagaaagctttgattgaagattttgcctcaaaatctttgactgagtactctgtcatagtcgtcaacgggtatctccaatctataaatcttaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="24356" stop="22269"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24063" g_stop="23784" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="280" r_length="280" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23783" i_stop="22944" i_length="840">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22943" g_stop="22837" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="387" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22836" i_stop="22699" i_length="138">
            <donor d_prob="0.654" d_score="1.00"/>
            <acceptor a_prob="0.861" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22698" g_stop="22569" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="517" r_length="130" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E200435" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E200435" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24063" e_stop="23784"/>
          <exon e_start="22943" e_stop="22837"/>
          <exon e_start="22698" e_stop="22569"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTTCCTAAGTCTCCGGCAGAGTCGCCGGGAAATAGACCGGAGAGAGCAGGGGGACGATGAGAGTATACAATTTTGGAGTCTAGAACTTGTGTCAACTTGTGCTTGTTAATTTACAGAGTCTTAATATTTCATATTTTTACTGAAATGGATGTAGACGAGATTGAGGAAGAGGAGTTTGGATTCTCGAGAAACTATTTCCTTGCTAAAGAATTGGGCTCTTCTTCAAGGAAAAAATCTGCTCGGAAGCTTTCAGAAATCGATCTCGTTGACGAAGAGGTTTGTGTTTTGACTCTTATTATTGTTCAACTGTATGTACAGCTTGAGCTGATTGCGCCAACTGTTCGAACACTACATTCGTGTGCTGTAGTCTTTGGCATTAGTGGCCTGAGCATATGTATTGGTTATTGTGCTATGGTTTTTTTTGATAGACTGTCTTTTGATTGTTTGTTCTGTGATCGACTGTATAACCAAAAATTTTGACATCGAGCTATCTAATGTTTGCCAATTCTTTATGTTACAAAGACTCTTCTTTTATAGTATATAGCATAGTCACTTCCTGCAAAAAACTAGGAGAAAAAGAGTATCCCTTAAGAGAATACCTTTGCTAACCCAAATAGATTGGATGATTCATTCAAGTAATTGTTAACACTTGATGAAATATTTGAGAACATGCCCCGCTTATCCTATACACTATGTTTCAATCAATTCTACTACCGTGTGTAGACGTACAGTAGTGACATTTTCTTCTTTTTTGTCATCATGACACATAATATTTCAGATAAGCGTTAGGGCAGATTTGTGATTTTTGTTAACCGCCATTTCATGTTTATCAGTGTCCTAAGATGTTAGACAAAATTTGTGATTTTTGTGATTAAGGAGAAAAGAAGGGCTGATTACTCATTGGATTTCCAATAAGTGCTTGAAGGTACATTTACCAAAGAGATGGACTACCTCATAATGTGGTCTGTGATCATTCAAATGATAAATCAATGGAAAAAGGCCATTGTACTATACCCTCAAAGATGAGGGTTTATGCACCATCTCCAAATCATACTATTTGTCCATGTTGTGCTCAAACATAAGAAAGAAGTCCATAAAAATTATTGTTGCATGCAGGAATTAAGAGAGGTGGCAGCTAGTATTGAGCCCAAACATGAGAAAGAAGTTAATGAGTTGATCAGTAGCTACCAAAGTTTATATTCAAAATGGCTTTTTGTGCTAAGGTCAGAGTCCTGATGTATCGGTTTACTCTATGCTATCCTTTTTTAATAAGTTTTTTTTATTTGCCTTTTTTCCATTATCTATCAAATTTAAACCAGGAAGGTTTTCCTTACTAATTTTCTTTTAATTTAATCTGATAGGAGCGGCTTTGCACTTTTGATGTATGGATTTGGATCAAAGAAAGCTTTGATTGAAGATTTTGCCTCAAAATCTTTGACTGAGTACTCTGTCATAGTCGTCAACGGGTATCTCCAATCTATAAATCTTAAA</genome_strand>
        <mrna_strand>GCACGAGCCTAAGTCTCCGGCAGAGTCGCCGGGAAATAGACCGGAGAGAGCAGGGGGACGATGAGAGTATACAATTTTGGAGTCTAGAACTTGTGTCAACTTGTGCTTGTTAATTTACAGAGTCTTAATATTTCATATTTTTACTGAAATGGATGTAGACGAGATTGAGGAAGAGGAGTTTGGATTCTCGAGAAACTATTTCCTTGCTAAAGAATTGGGCTCTTCTTCAAGGAAAAAATCTGCTCGGAAGCTTTCAGAAATCGATCTCGTTGACGAAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTAAGAGAGGTGGCAGCTAGTATTGAGCCCAAACATGAGAAAGAAGTTAATGAGTTGATCAGTAGCTACCAAAGTTTATATTCAAAATGGCTTTTTGTGCTAAG..........................................................................................................................................GAGCGGCTTTGCACTTTTGATGTATGGATTTGGATCAAAGAAAGCTTTGATTGAAGATTTTGCCTCAAAATCTTTGACTGAGTACTCTGTCATAGTCGTCAACGGGTATCTCCAATCTATAAATCTTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E395790" ref_strand="+" ref_description="SGN-E395790 [TUS-18-C9]">
      <seq>gacgatgagagtatacaattttggagtctagaacttgtgtcaacttgtgcttgttaatttacagagtcttaatatttcatatttttactgaaatggatgtagacgagattgaggaagaggagtttggattctcgagaaactatttccttgctaaagaattgggctcttcttcaaggaaaaaatctgctcggaagctttcagaaatcgatctcgttgacgaagaggaattaagagaggtggcagctagtattgagcccaaacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="24307" stop="22605"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24007" g_stop="23784" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="224" r_length="224" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23783" i_stop="22944" i_length="840">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22943" g_stop="22905" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="263" r_length="39" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E395790" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>263</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E395790" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24007" e_stop="23784"/>
          <exon e_start="22943" e_stop="22905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACGATGAGAGTATACAATTTTGGAGTCTAGAACTTGTGTCAACTTGTGCTTGTTAATTTACAGAGTCTTAATATTTCATATTTTTACTGAAATGGATGTAGACGAGATTGAGGAAGAGGAGTTTGGATTCTCGAGAAACTATTTCCTTGCTAAAGAATTGGGCTCTTCTTCAAGGAAAAAATCTGCTCGGAAGCTTTCAGAAATCGATCTCGTTGACGAAGAGGTTTGTGTTTTGACTCTTATTATTGTTCAACTGTATGTACAGCTTGAGCTGATTGCGCCAACTGTTCGAACACTACATTCGTGTGCTGTAGTCTTTGGCATTAGTGGCCTGAGCATATGTATTGGTTATTGTGCTATGGTTTTTTTTGATAGACTGTCTTTTGATTGTTTGTTCTGTGATCGACTGTATAACCAAAAATTTTGACATCGAGCTATCTAATGTTTGCCAATTCTTTATGTTACAAAGACTCTTCTTTTATAGTATATAGCATAGTCACTTCCTGCAAAAAACTAGGAGAAAAAGAGTATCCCTTAAGAGAATACCTTTGCTAACCCAAATAGATTGGATGATTCATTCAAGTAATTGTTAACACTTGATGAAATATTTGAGAACATGCCCCGCTTATCCTATACACTATGTTTCAATCAATTCTACTACCGTGTGTAGACGTACAGTAGTGACATTTTCTTCTTTTTTGTCATCATGACACATAATATTTCAGATAAGCGTTAGGGCAGATTTGTGATTTTTGTTAACCGCCATTTCATGTTTATCAGTGTCCTAAGATGTTAGACAAAATTTGTGATTTTTGTGATTAAGGAGAAAAGAAGGGCTGATTACTCATTGGATTTCCAATAAGTGCTTGAAGGTACATTTACCAAAGAGATGGACTACCTCATAATGTGGTCTGTGATCATTCAAATGATAAATCAATGGAAAAAGGCCATTGTACTATACCCTCAAAGATGAGGGTTTATGCACCATCTCCAAATCATACTATTTGTCCATGTTGTGCTCAAACATAAGAAAGAAGTCCATAAAAATTATTGTTGCATGCAGGAATTAAGAGAGGTGGCAGCTAGTATTGAGCCCAAACAT</genome_strand>
        <mrna_strand>GACGATGAGAGTATACAATTTTGGAGTCTAGAACTTGTGTCAACTTGTGCTTGTTAATTTACAGAGTCTTAATATTTCATATTTTTACTGAAATGGATGTAGACGAGATTGAGGAAGAGGAGTTTGGATTCTCGAGAAACTATTTCCTTGCTAAAGAATTGGGCTCTTCTTCAAGGAAAAAATCTGCTCGGAAGCTTTCAGAAATCGATCTCGTTGACGAAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTAAGAGAGGTGGCAGCTAGTATTGAGCCCAAACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E242671" ref_strand="+" ref_description="SGN-E242671 [cLED-30-P13]">
      <seq>ttgacgattacttcgagggcgaaagttctgagatgtacgactatcaagttgattgggggatgccagatagttctagcccgctgcacccagtttattttgctaagtgcttgactaaggctgttcacatgaaacatgctaagatgatggatcatccatcaaatggcatttcaatttggggacgcctcaagcctgcctttctggaagaagaatattacgtgcgaaggctcttcagtggcgatgaagttagtgacggctccaccttggattggaaagatggagaaattttgagctttagttcaagatatgacaagagccgcactttgtcttctatctacagattggaaatcatgagagtcgacctattttctgtgtatggtgctcagttagcagtaaatttgtatgacttccatgatgctgagcctgacagtcttgtatactcagctccagcaattttagagtggtttcggcagcaaggaataaggtgcaaatatgcacttaaagctctttgcagaaagaaaggacttcatgttgagagagcaaatttgattggagttgacagtcttggcatggatgtcagagttctctctggaacagaagtgtggacacatcgtttccccttcaaagttagggcacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="30269" stop="24892"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29969" g_stop="29953" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="17" r_length="17" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29952" i_stop="29856" i_length="97">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29855" g_stop="29757" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="116" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29756" i_stop="27766" i_length="1991">
            <donor d_prob="0.813" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27765" g_stop="27609" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="273" r_length="157" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27608" i_stop="26456" i_length="1153">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26455" g_stop="26346" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="383" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26345" i_stop="25852" i_length="494">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.636" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25851" g_stop="25702" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="533" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="25701" i_stop="25291" i_length="411">
            <donor d_prob="0.176" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="25290" g_stop="25195" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="534" r_stop="629" r_length="96" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E242671" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>629</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E242671" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29969" e_stop="29953"/>
          <exon e_start="29855" e_stop="29757"/>
          <exon e_start="27765" e_stop="27609"/>
          <exon e_start="26455" e_stop="26346"/>
          <exon e_start="25851" e_stop="25702"/>
          <exon e_start="25290" e_stop="25195"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGACGATTACTTCGAGGTGAGTAAACAACCACTGCAATTTCACTATATAATTCAGCCGATTAGTCTTAGCTTATTCTTATGTTTATATGTGTCATTGTATTTGTTTTTTGCAGGGCGAAAGTTCTGAGATGTACGACTATCAAGTTGATTGGGGGATGCCAGATAGTTCTAGCCCGCTGCACCCAGTTTATTTTGCTAAGTGCTTGACTAAGGTGGTTTCTTTTAGCAACTCTCCTCCTAGCTATTTTTTGTTAATGAACTGTTTCTCGCTCCTAGCTCTATTCTGTAACTGTCACTTATATGTCTATGTTTTCATTTCCCAAATCTTATTCTTTTCACAATAACCAAAAAGAAATAATCAAAGGCATATACATAGGAAAAAGCCAGATGGCATCACTGCAACGTCGTGTTTCATTTACTGAGTACATGTCAATCCAAACTAGTTTCGGTCAATTTATTCAAGTACAATAAACACTTTTTTTATTCTCTAAAGCAGAATATGTAAAGTCTCGGCTTTTGATGCCCCAACCTTTTTCTGTATTAATGAGTTTGGGTTTCATGCATTTTTCTGGGAAAATATTGAAGAAATAAACTCAAATTCTAAAACAGGAGGCAGTAGCTGTTTCTAAAATAATATATAAGAAAACATTCACACATAAAACCGGAGGAACTTTTCGTATGAGCAACCAAATCACATCTTTACAGAATTGATGATGTTTTTAAAAATAATTCACAAAGTAGTCATTTTATTGATGAGATCACGATTGTTGCTTATTTTAGTTGACCGTATTATGGAAGCTTGAAACACAGTAGAAATATATTGAATTTTTCTTCTTTTTTTGCCTTCTTTTTTTAAGTTGAAAGTTGGAATAAGAAGTACCTAGGAGGAGGAGACATACAATGGTTGTTTTAAGGATCTATCTCAAAGTGAAGCTCTCAGTGACACTGTATAATGGATATAAATATTAAGATAACCTTCACAAGTGGACGAACTAATTTACTGGTTTCTTGGGGCCTCACTCTAACCTGAACAAGGTCGGTTTTGTAGGCTCATAACAGTGTAACCTTGATTTCTAAGGATACAAGAACCAAGTCTGGTAGAGGAAATATGGCCATTAGACCAGCGCATGATTAACAACACCATAACCTTTGAGTCATGGAGCTGTAGAGATTCACTCTCAGCTCCAATCTTGGTGTGCTAGTATGGTCTATTGTTTTTTTCTTTTGTTGATAAACCTGGTTTCGGGCCAGCGCGTATACCTCAACTAATTCCACAGGATACTTGCCACCTCACACCAACAACAGGTGCTAGGTAACTTTTCCACTAAGACTAGAACATATGGGAAGAAATCACCCAGTGTGTTTTTGTCTCTGTTAGGATTTGAACCTGAGACCTCATGGTGCCAGGGTTATTTGGTATATGTTGCTTGTTAGTAGGTATTCTATAGAATAAGTGGAGGTGCGTGAAAGCTTGGCCCGAACACCACAATTATAAGGAAAAAAAAGACATTGAGGTGCAAAAGTGCCAATCAAGTTCTGTCTCAAAAAAAAAGTGCCAATCAAGTAACATGCAACAAAAAGTACAATAAAAACTCTTCTAGCATACTGCAGTAAAGTTCTTGGTACGCCTTCCTATATATTATATTATTACCTCTCTCTGGATAATGACCTCGCATTATTGCGTTTGTCCACAATAGTTATGGGATGGGATTTGGTCTCATGCTATTAGGAAGTTCTCACATCAGGAACTAGCTTTTGGGACCCATCTAAATTCTTGGTCTACCCAATATTGGGCTTTCATATTATGTTGTCCAAGCTCTAGTTAATAGGCCTAGCTAGGTATGCAGCGGGGGAGTGTTGAATTTTTGCTCATTGGTTGTGGGATGGGTATTTGGTCTCCTTGTATGGTTTTGGTAATCCTCATCTCATGAGCTAACTTTTCGTGTTGAGTTAAGTTCAGGCTAGTTTTTGATCTCCCATCATACATGAGATGCTATGTGACGTATGGTTTTCAGAAATGACATTTGCCCAACTTTTGGAGCATACATTTAAACCTTAGCTTCTTTAATGAGTTGTGCATTAAATGGAATATGCTCTAACAATATGCTACATTTTCATTGTATCTGTTCTAAATTTGATTTTTCTGAATAGACATTGTCCAACTTGGTTCCTCTCAAGCCACAACCTATTGTGTATTTCGTAGGCTGTTCACATGAAACATGCTAAGATGATGGATCATCCATCAAATGGCATTTCAATTTGGGGACGCCTCAAGCCTGCCTTTCTGGAAGAAGAATATTACGTGCGAAGGCTCTTCAGTGGCGATGAAGTTAGTGACGGCTCCACCTTGGATTGGAAAGGTAAAGTTGAGCAATCAATAATTCGTTTCACACCCTGAGGGAAGCAGGGAATTTTCAAAATTCAAGGCTAGAAAATGTTATCTACGTTGTTTTGGTATCATAGTTTGTTGTCTTGGGTATTTAAATGGAGAAGGGTAGAAGGGCTGATGCGCAAACCGTGAGTGACGCAATGGGGATTTCTCATTTATAAAAAAAAGAATGTTTTCCTGATAAGTGATAAGTTAAAAATGTTTCTTCTGTTGATACCTTCATCTCAGGGATGATTGCTCATAAGCATTATGTATGTCTATACCTTTAAATCAATATTTGGCCTTAAGATTGCAATACAAAATGATGAATTTGCAGTAGGGATTAAGGTATAGACGATATAATGGAGTCACCTAAAATGAACTTATAGAATAGTCTAACTTAGATGAAGCTGAAAGGGGATGTTCTGGTAACAAATTATGAAATTTAGTAACTTCTTGAGGGCTGTTTAGACTACAGATTTTGTTATTTTTTCAGGTTTAGTTTCAGGTTTTAGGAGACCCCAAAAAAAAAAGAGATTGGAGTAGAAAAAGAGCAGGAATTATTTGAAGGAAAAGAAAGGAGATTGAGGAAGGATCAGTAGATATTTCTCAAATATTTCTTTGTGCAAGCTGTCCCCGTCTCCTGAAACTCGGAATTATGCTATGTGCTTCTTTAGGAGATATTGGCGGAAAATAACAAAAGCTATACGTGAGTCTTGAACTTGAGGCCAAGAAAAGACATGAAACTTGAAGCAAGTCTTGAACTTGTGGCCAAGCAAAGACATGAAACTTGAAGCGTCATAGCTTTACTTTCTTTGATCCCCTTCCTCCTGTTAAGTCTTTTAAGTTAAAATTCCTTTCACTTAAACCCACCTTTGGGAGAGTTCCTCTACAATATTCATTCCTTTAACAAAAGTATGCCTTATCCCTTTCAACTCATTTATTTAACCTGCAAAAACTGTATTGGTCTGCGCTGTTAGCTGTATGATCACTGATCTTAGTTTAGAATGATCTCTTACTCTAGATCTCAGATCAGTGTATGTGACAGTGTGAGATCTGGTCACCAAGAATCTTGTTCCTTTTCGAGTTTTTATTGTATTATTTGATTATTTATCTGTTGATTTGCTCCTTTTTTTTTGTAACAGATGGAGAAATTTTGAGCTTTAGTTCAAGATATGACAAGAGCCGCACTTTGTCTTCTATCTACAGATTGGAAATCATGAGAGTCGACCTATTTTCTGTGTATGGTGCTCAGGTATGTACTTAACTCATTTCGTGCTTGTGACGGGATTCCAGCCAACAAAAATCAGATTAGTGGGGTGGGGTGAAATGTGTTGATTCAAGTATTCTCTGTGTTTTTACTTCTAAAGATTATGATGCACATGTTTGGTGTGTGTTACGCACAATCCATTTTAAGTAGTCATACACAAAAGGAGGAGGTACTAGGCTCGTCGTTGGAAAGATGGTGTGATAAGTCACCTAAGTATGTCCAGGTGCGAAGGGGGAAATCTTGACGAGTGAGGGATTAAAGTATGTATTGAGTCTCTCTTTGTTACATCTTAATCTTGCTTATTGAGTAGTATTGCATGTATGGATTATCTAGTTTTAGTATTTCCTATCCGAAAAGAACTGAAATATGGTAGAAGAATACGATGCGTGCAGAAATGAAAATATTTTTTTTTGAAGTATTCTAGGACTCCGATAGGCAATAATGTAATGCTCAACGTTCATGCCTCTTTTTTGACGCAGTTAGCAGTAAATTTGTATGACTTCCATGATGCTGAGCCTGACAGTCTTGTATACTCAGCTCCAGCAATTTTAGAGTGGTTTCGGCAGCAAGGAATAAGGTGCAAATATGCACTTAAAGCTCTTTGCAGAAAGAAAGGACTTCATGTTGAGGTACTCGTCAATTGATGCTGATGCTTAAACTTTGATATGCATAGAAGTTGCAAAGAATTAGGTTGATCTAGTGCTGTTTCTACTCTTCAAATGATGGTTCTTTTGTAACACTAGTTTGGACTATTAAATTTACTCTTATTCGCGAAACCCCATTTAGAAGTTGAAATCTAGTATTCTGATGTAAATGTTGGCAGTTATTTCGATATCATTTTTTCCCGCTTTAACTTTTTCATTTCAATAAATGTTTGATTGATCATGTCATTATCTTACATTAGAAAAGTTCAGTGAGAAGTGAAATCATAGGTAAAATCGAACATTCTGCTCACGCAATAGCCCATTTGGAATTTTTCATATTTTATGTATCTATCAGTCTTTGGCATACATCTAATATAACATCCACCCTTTTTGCAGAGAGCAAATTTGATTGGAGTTGACAGTCTTGGCATGGATGTCAGAGTTCTCTCTGGAACAGAAGTGTGGACACATCGTTTCCCCTTCAAAGTTAGG</genome_strand>
        <mrna_strand>TTGACGATTACTTCGAG.................................................................................................GGCGAAAGTTCTGAGATGTACGACTATCAAGTTGATTGGGGGATGCCAGATAGTTCTAGCCCGCTGCACCCAGTTTATTTTGCTAAGTGCTTGACTAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTCACATGAAACATGCTAAGATGATGGATCATCCATCAAATGGCATTTCAATTTGGGGACGCCTCAAGCCTGCCTTTCTGGAAGAAGAATATTACGTGCGAAGGCTCTTCAGTGGCGATGAAGTTAGTGACGGCTCCACCTTGGATTGGAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGAAATTTTGAGCTTTAGTTCAAGATATGACAAGAGCCGCACTTTGTCTTCTATCTACAGATTGGAAATCATGAGAGTCGACCTATTTTCTGTGTATGGTGCTCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCAGTAAATTTGTATGACTTCCATGATGCTGAGCCTGACAGTCTTGTATACTCAGCTCCAGCAATTTTAGAGTGGTTTCGGCAGCAAGGAATAAGGTGCAAATATGCACTTAAAGCTCTTTGCAGAAAGAAAGGACTTCATGTTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCAAATTTGATTGGAGTTGACAGTCTTGGCATGGATGTCAGAGTTCTCTCTGGAACAGAAGTGTGGACACATCGTTTCCCCTTCAAAGTTAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343009" ref_strand="+" ref_description="SGN-E343009 [cTOF-11-G5]">
      <seq>tttcttgatgttcatctccgcgccttcatcatcaatctccatcggtccctcgcaatgtttcatatgtcatgctgatggaggtagttgctcagcatcattaggagctgcaagcagttggatcaagccatcatacgaggttcagatattctctgaccattcaggtataagtttcaggactgagaaccctttctttggagctgcacaatcgcattggcttgctgtaggacacgagagtagcctttcaagaatttcagttgcagcagattacccagattctgttcctgattcccctaactatgtccgcaacagtggctatcaccctcttgaaggaatgcgagaccagagacgagttcgtgatactgaactcacagctgctgaaatagcaaggacaactgttgaggctaataacaatgcattgttgatattccctggcacggttcattgtgaacctcacgaacaagtgtcatgggcagaatttcagtacgtgattgatgaatatggagacatattctttgaaatttatgatgacaagaatatcttgcggaatcgggatgcaagtaattccgtgaatgcattgattggaatggaattctcccaatacgagaaagggaggntagaatcacctgatgacatcaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="34152" stop="29702"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33852" g_stop="33809" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="44" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33808" i_stop="32650" i_length="1159">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32649" g_stop="32526" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="168" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32525" i_stop="31575" i_length="951">
            <donor d_prob="0.741" d_score="1.00"/>
            <acceptor a_prob="0.799" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31574" g_stop="31343" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="400" r_length="232" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31342" i_stop="31210" i_length="133">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31209" g_stop="31107" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="503" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31106" i_stop="31011" i_length="96">
            <donor d_prob="0.829" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="31010" g_stop="30946" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="504" r_stop="568" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="30945" i_stop="30073" i_length="873">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="30072" g_stop="30002" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="569" r_stop="639" r_length="71" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E343009" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E343009" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33852" e_stop="33809"/>
          <exon e_start="32649" e_stop="32526"/>
          <exon e_start="31574" e_stop="31343"/>
          <exon e_start="31209" e_stop="31107"/>
          <exon e_start="31010" e_stop="30946"/>
          <exon e_start="30072" e_stop="30002"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTGATGTTCATCTCCGCGCCTTCATCATCAATCTCCATCGGTAATCACTGAAATCATCTTTACTTTTTGATACAAAAGACAGAGGACTCAAAAAGTTTTCTTTTTTTTTTTCGTTCAAGAACCCTTTTTTATGTGCCTGTTAAAAGGGTTATTGATTTTATTCATGTTTTTTCACTTCAATTTTTTGTGGGGTTGACTTTTTATTTGAATAATTAGCACCCATTAGCAATAAATTTGATTTTTTTTGGGTGGTGGGGTGGTGGGGGTGGAGTTTTTTTCTTTCTGGTATACTGCTGTTGTATGTCATAGTTTCTTGTGTTGTCAAGGTGGTAGTATTTTTGAATGTCTGTGGACAAGGAGGTTGTTAGACTTGTCTTAAAATAAGTGTCACTTTAGCTCATTTCACACTCGTCATCAAGAAAAATATTAAATAGAAGAATTGAGCATTATTAACAAGAAGTAGTCTTCCAACATACTAAGTTTTGTATTGAAAGGTGACAATTTTGTTTGCTAAAGTGACAATTATTTTGGGACGGAGGGAGTAAATTCTATTGTAGTGGTTGTTGTTTGTCTTCACTATATTGCCTTAGAGGTTCTGTAATTCCACCAAATCACAAGTTTTGCTTCCTATATCTATAGGGTTAAGAAGAATTTGTGAGAACCACAAACTCTGCCTTTCTTCCTTCTACATTTCTCTGCAAATGAATATTTATGTATATCGTTTGTTGTTTTTCATTGCTTGAAACCCAGATAAGAGAAGGACAACTCTTTGTTAATAGTTTTTTAAAGTGTCATGGGTAACTGAATACCAAATATCTCGTAAACCTTCAACTCAATGAGATGTAGCTACGATTGTGCTATAGGTTTGTTCTCTTTATTTGGTGTTTAATGATGCATATAGAGAGTCTTAACATTCTTGTTTGGAAAGGGTAGGTCTGGGAGGTGGTATTGTGTCTCTTCTGGACCTTTTGAAATAAAAAAACGGAAGAGTTTGGAAGAGGTCTTACTTTTAGGCACAATTGATTAAATTGTTGTCTGATAACCAAAATAAAATTTACATGAAAGCAAGCTTACTTGTTCACATGATCTTAATGAGGGGATGCGTCTTCATTAGGTGTTATCATTTCTTTTTACTTTTTAAGTTTTCTGTGGTCCTTAGTTTGCCTTTTATTTTTAAAAAATATTGGCGACTGTTCCAGGTCCCTCGCAATGTTTCATATGTCATGCTGATGGAGGTAGTTGCTCAGCATCATTAGGAGCTGCAAGCAGTTGGATCAAGCCATCATACGAGGTTCAGATATTCTCTGACCATTCAGGTATAAGGTACATAGCTTGAGAATCCTTTTCCAATAATGACAAAGAAGCTTGACTTGACTGATATTTCTGATCCTCTGGGTTTCTGCTGCTTGTTGACCTAATTACCTTCCATAGTTAACTATTGGTGTTTGTAGTGTAAAATTCTCTTTTTTCTTTGGGAACTCTTAAGTCCGAAGCCAGTTCGTTGGAACCAATATGGCTCTGCTCTTGGAGACTGGTAAGAAGTAAGAACAAGATCAGAAATCATCTTAATCTTCTTGGTCTAGTTAGGAATGATCTCGATTTATTCTATTCCATTCCTCAATGTAATTTTGTTTGGTAAATTATGAGTTAATCTAGATTTTACAAACTCCTAGTTCAGCAAGTCTACTCCTATTCCATATTTGGAACTTACATGGCTATAAGATATTCAACATTTTACTTGTCAAATGGATGTATGGAAGACTGTACAGATGGAAGAAATTTAAATGACTAGTTAGAGAGAGTAGCTTCCTGACCTCCGTTGAGTCGGTCTTTTCCAATCCAAGTCAGCAACTCAGCACCATTTTCTACCTTCAGGCTATCACCAACCATTACTTCCCATATTTCCAGAACGCCTAGATGCTTGAGACTTCGCCAGAAAAACCCATCACCCAAAGAGGCAGGTGTAATAACTTTACCACTACTAGAGATGATTGTTTAGTCAAGTACTCTTTGAAAGATATTAGTTTTCTGCATATGGAGACTCTAGTTGTGTGCACTTTGTATTGATATTTACTTCCCAAATGCATTTGTGAACTTTGTATTGCTGTCGTGTTCTCTTTATTATTTTACCATAGTTCTCAAAAAAAAAAAAACACTCTAACCTTTTCACCTTTTTTACTGAAGGAAAAAAGTTTACTATTCTGGTTCTACTGTAGTTTGGCTTTTTCCAGATGAAACTATGTGTTCTTACACATGTGCTCCTCTCCTGTATAGTTTCAGGACTGAGAACCCTTTCTTTGGAGCTGCACAATCGCATTGGCTTGCTGTAGGACACGAGAGTAGCCTTTCAAGAATTTCAGTTGCAGCAGATTACCCAGATTCTGTTCCTGATTCCCCTAACTATGTCCGCAACAGTGGCTATCACCCTCTTGAAGGAATGCGAGACCAGAGACGAGTTCGTGATACTGAACTCACAGCTGCTGAAATAGCAAGGACAACTGTTGAGGTTTGCGCTAATATATGCTATATAAATTAGATATTGTTCATTCTACATGCAAGTGAAAAAAGTTTGCATGGTATAAGTACGATTATATTTCTTTTGGATGGCTCAGATGGGGTATTTTTATTTCTAATTGTAGGCTAATAACAATGCATTGTTGATATTCCCTGGCACGGTTCATTGTGAACCTCACGAACAAGTGTCATGGGCAGAATTTCAGTACGTGATTGATGAATATGGAGGTTTGTCTGTTTCTGTTGCAGTGTGTCTCACAGTGTTGTAATTTGATCATTTCCCTTATTATGTTCATATTTGATGGTTTGCTTTCATGTGCTCAGACATATTCTTTGAAATTTATGATGACAAGAATATCTTGCGGAATCGGGATGCAAGTAATTCCGTGGTACATATTTCTACTTTTATTTATATTTTGTCTTTCACAGTTAATATCAGATCATGGTTGAGCTTTATCTCGTTAGACATTGTGATTAGTATTTTCATATACCTATTAAAAATTGTGACTAGTATCTTCACAACTCATAAGCATGTCCTCTGAATTCACCAAGTTCTTATTTATGCGGTGCAGTTATAATCCCTTGGCGTCTTATTTGGCTGCGTGTTGTCATATCTCTATTAGTTATTGTCTTAAGGATCATACATGAACTGATGAGATCGCTAACAACTAACACCTATACCTTGGGTTGTTTTAATTAATTGTCACTTCATCATTTCTAAGGCTACTCGTAACAAAAAGTGTTGGGGTATCATGACTTTTAACACCTTTAACCATTATAGTGTTGAACCTGAAAATTGTTGCATTTGGAAGTCCGTGTAAGAAATGACTAAACTATCTCGATGATCTCTCACTTTATCCTCTTTGTACTTTTTCTTTCCATAGGGATGTGATTGGATCAAATAGCTTTACGCTAGTTGTCAACCTACCGCAACTCCATTTTATCCAGACTAGGGATTGACATAAGAATACAAAGCTCACACAGTCGGACTTAATGGCTTTAATATGTTTTTCTTCCCTTTAATTTTATTTCCTCCTATCAATATATTAATGGAAGTTCTTCCTTGGGCTTTATGTGAGCTGGCTAGTGTCTCGTTTTTGACATTGAGATGTTGAATTAGACTTGTCTTGAGGTTGATAAGCGACTGTTGAAGAATGTGTTATGTGGAATTTGAGTCGTAAGAGTGTAGATCTGTAGTGAAATATATGTCTGTAGGTCAGTGCTGAAATCTCTACCATCCCTATTTTACTGGATTATTTCAGAATGCATTGATTGGAATGGAATTCTCCCAATACGAGAAGAGGAGGGTAGAATCACCTGATGACATCAATTT</genome_strand>
        <mrna_strand>TTTCTTGATGTTCATCTCCGCGCCTTCATCATCAATCTCCATCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCTCGCAATGTTTCATATGTCATGCTGATGGAGGTAGTTGCTCAGCATCATTAGGAGCTGCAAGCAGTTGGATCAAGCCATCATACGAGGTTCAGATATTCTCTGACCATTCAGGTATAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGGACTGAGAACCCTTTCTTTGGAGCTGCACAATCGCATTGGCTTGCTGTAGGACACGAGAGTAGCCTTTCAAGAATTTCAGTTGCAGCAGATTACCCAGATTCTGTTCCTGATTCCCCTAACTATGTCCGCAACAGTGGCTATCACCCTCTTGAAGGAATGCGAGACCAGAGACGAGTTCGTGATACTGAACTCACAGCTGCTGAAATAGCAAGGACAACTGTTGAG.....................................................................................................................................GCTAATAACAATGCATTGTTGATATTCCCTGGCACGGTTCATTGTGAACCTCACGAACAAGTGTCATGGGCAGAATTTCAGTACGTGATTGATGAATATGGAG................................................................................................ACATATTCTTTGAAATTTATGATGACAAGAATATCTTGCGGAATCGGGATGCAAGTAATTCCGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCATTGATTGGAATGGAATTCTCCCAATACGAGAAAGGGAGGNTAGAATCACCTGATGACATCAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E276415" ref_strand="+" ref_description="SGN-E276415 [cLEN-17-B23]">
      <seq>tcatctccgcgccttcatcatcaatctccatcggtccctcgcaatgtttcatatgtcatgctgatggaggtagttgctcagcatcattaggagctgcaagcagttggatcaagccatcatacgaggttcagatattctctgaccattcaggtataagtttcaggactgagaaccctttctttggagctgcacaatcgcattggcttgctgtaggacacgagagtagcctttcaagaatttcagttgcagcagattacccagattctgttcctgattcccctaactatgtccgcaacagtggctatcaccctcttgaaggaatgcgagaccagagacgagttcgtgatactgaactcacagctgctgaaatagcaaggacaactgttgaggctaataacaatgcattgttgatattccctggcacggttcattgtgaacctcacgaacaagtgtcatgggcagaatttcagtacgtgattgatgaatatggagacatattctttgaaatttatgatgacaagaatatcttgcggaatcgggatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="34141" stop="30659"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33841" g_stop="33809" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="33" r_length="33" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33808" i_stop="32650" i_length="1159">
            <donor d_prob="0.993" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32649" g_stop="32526" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="34" r_stop="157" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32525" i_stop="31575" i_length="951">
            <donor d_prob="0.741" d_score="1.00"/>
            <acceptor a_prob="0.799" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31574" g_stop="31343" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="389" r_length="232" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31342" i_stop="31210" i_length="133">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31209" g_stop="31107" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="390" r_stop="492" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31106" i_stop="31011" i_length="96">
            <donor d_prob="0.829" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="31010" g_stop="30961" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="493" r_stop="542" r_length="50" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E276415" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E276415" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33841" e_stop="33809"/>
          <exon e_start="32649" e_stop="32526"/>
          <exon e_start="31574" e_stop="31343"/>
          <exon e_start="31209" e_stop="31107"/>
          <exon e_start="31010" e_stop="30961"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATCTCCGCGCCTTCATCATCAATCTCCATCGGTAATCACTGAAATCATCTTTACTTTTTGATACAAAAGACAGAGGACTCAAAAAGTTTTCTTTTTTTTTTTCGTTCAAGAACCCTTTTTTATGTGCCTGTTAAAAGGGTTATTGATTTTATTCATGTTTTTTCACTTCAATTTTTTGTGGGGTTGACTTTTTATTTGAATAATTAGCACCCATTAGCAATAAATTTGATTTTTTTTGGGTGGTGGGGTGGTGGGGGTGGAGTTTTTTTCTTTCTGGTATACTGCTGTTGTATGTCATAGTTTCTTGTGTTGTCAAGGTGGTAGTATTTTTGAATGTCTGTGGACAAGGAGGTTGTTAGACTTGTCTTAAAATAAGTGTCACTTTAGCTCATTTCACACTCGTCATCAAGAAAAATATTAAATAGAAGAATTGAGCATTATTAACAAGAAGTAGTCTTCCAACATACTAAGTTTTGTATTGAAAGGTGACAATTTTGTTTGCTAAAGTGACAATTATTTTGGGACGGAGGGAGTAAATTCTATTGTAGTGGTTGTTGTTTGTCTTCACTATATTGCCTTAGAGGTTCTGTAATTCCACCAAATCACAAGTTTTGCTTCCTATATCTATAGGGTTAAGAAGAATTTGTGAGAACCACAAACTCTGCCTTTCTTCCTTCTACATTTCTCTGCAAATGAATATTTATGTATATCGTTTGTTGTTTTTCATTGCTTGAAACCCAGATAAGAGAAGGACAACTCTTTGTTAATAGTTTTTTAAAGTGTCATGGGTAACTGAATACCAAATATCTCGTAAACCTTCAACTCAATGAGATGTAGCTACGATTGTGCTATAGGTTTGTTCTCTTTATTTGGTGTTTAATGATGCATATAGAGAGTCTTAACATTCTTGTTTGGAAAGGGTAGGTCTGGGAGGTGGTATTGTGTCTCTTCTGGACCTTTTGAAATAAAAAAACGGAAGAGTTTGGAAGAGGTCTTACTTTTAGGCACAATTGATTAAATTGTTGTCTGATAACCAAAATAAAATTTACATGAAAGCAAGCTTACTTGTTCACATGATCTTAATGAGGGGATGCGTCTTCATTAGGTGTTATCATTTCTTTTTACTTTTTAAGTTTTCTGTGGTCCTTAGTTTGCCTTTTATTTTTAAAAAATATTGGCGACTGTTCCAGGTCCCTCGCAATGTTTCATATGTCATGCTGATGGAGGTAGTTGCTCAGCATCATTAGGAGCTGCAAGCAGTTGGATCAAGCCATCATACGAGGTTCAGATATTCTCTGACCATTCAGGTATAAGGTACATAGCTTGAGAATCCTTTTCCAATAATGACAAAGAAGCTTGACTTGACTGATATTTCTGATCCTCTGGGTTTCTGCTGCTTGTTGACCTAATTACCTTCCATAGTTAACTATTGGTGTTTGTAGTGTAAAATTCTCTTTTTTCTTTGGGAACTCTTAAGTCCGAAGCCAGTTCGTTGGAACCAATATGGCTCTGCTCTTGGAGACTGGTAAGAAGTAAGAACAAGATCAGAAATCATCTTAATCTTCTTGGTCTAGTTAGGAATGATCTCGATTTATTCTATTCCATTCCTCAATGTAATTTTGTTTGGTAAATTATGAGTTAATCTAGATTTTACAAACTCCTAGTTCAGCAAGTCTACTCCTATTCCATATTTGGAACTTACATGGCTATAAGATATTCAACATTTTACTTGTCAAATGGATGTATGGAAGACTGTACAGATGGAAGAAATTTAAATGACTAGTTAGAGAGAGTAGCTTCCTGACCTCCGTTGAGTCGGTCTTTTCCAATCCAAGTCAGCAACTCAGCACCATTTTCTACCTTCAGGCTATCACCAACCATTACTTCCCATATTTCCAGAACGCCTAGATGCTTGAGACTTCGCCAGAAAAACCCATCACCCAAAGAGGCAGGTGTAATAACTTTACCACTACTAGAGATGATTGTTTAGTCAAGTACTCTTTGAAAGATATTAGTTTTCTGCATATGGAGACTCTAGTTGTGTGCACTTTGTATTGATATTTACTTCCCAAATGCATTTGTGAACTTTGTATTGCTGTCGTGTTCTCTTTATTATTTTACCATAGTTCTCAAAAAAAAAAAAACACTCTAACCTTTTCACCTTTTTTACTGAAGGAAAAAAGTTTACTATTCTGGTTCTACTGTAGTTTGGCTTTTTCCAGATGAAACTATGTGTTCTTACACATGTGCTCCTCTCCTGTATAGTTTCAGGACTGAGAACCCTTTCTTTGGAGCTGCACAATCGCATTGGCTTGCTGTAGGACACGAGAGTAGCCTTTCAAGAATTTCAGTTGCAGCAGATTACCCAGATTCTGTTCCTGATTCCCCTAACTATGTCCGCAACAGTGGCTATCACCCTCTTGAAGGAATGCGAGACCAGAGACGAGTTCGTGATACTGAACTCACAGCTGCTGAAATAGCAAGGACAACTGTTGAGGTTTGCGCTAATATATGCTATATAAATTAGATATTGTTCATTCTACATGCAAGTGAAAAAAGTTTGCATGGTATAAGTACGATTATATTTCTTTTGGATGGCTCAGATGGGGTATTTTTATTTCTAATTGTAGGCTAATAACAATGCATTGTTGATATTCCCTGGCACGGTTCATTGTGAACCTCACGAACAAGTGTCATGGGCAGAATTTCAGTACGTGATTGATGAATATGGAGGTTTGTCTGTTTCTGTTGCAGTGTGTCTCACAGTGTTGTAATTTGATCATTTCCCTTATTATGTTCATATTTGATGGTTTGCTTTCATGTGCTCAGACATATTCTTTGAAATTTATGATGACAAGAATATCTTGCGGAATCGGGAT</genome_strand>
        <mrna_strand>TCATCTCCGCGCCTTCATCATCAATCTCCATCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCTCGCAATGTTTCATATGTCATGCTGATGGAGGTAGTTGCTCAGCATCATTAGGAGCTGCAAGCAGTTGGATCAAGCCATCATACGAGGTTCAGATATTCTCTGACCATTCAGGTATAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGGACTGAGAACCCTTTCTTTGGAGCTGCACAATCGCATTGGCTTGCTGTAGGACACGAGAGTAGCCTTTCAAGAATTTCAGTTGCAGCAGATTACCCAGATTCTGTTCCTGATTCCCCTAACTATGTCCGCAACAGTGGCTATCACCCTCTTGAAGGAATGCGAGACCAGAGACGAGTTCGTGATACTGAACTCACAGCTGCTGAAATAGCAAGGACAACTGTTGAG.....................................................................................................................................GCTAATAACAATGCATTGTTGATATTCCCTGGCACGGTTCATTGTGAACCTCACGAACAAGTGTCATGGGCAGAATTTCAGTACGTGATTGATGAATATGGAG................................................................................................ACATATTCTTTGAAATTTATGATGACAAGAATATCTTGCGGAATCGGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E253698" ref_strand="+" ref_description="SGN-E253698 [cLEG-32-A3]">
      <seq>gtttcatatcattaatactctgtttcttgatgttcatctccgcgccttcatcatcaatctccatcggtcccctcgcaatgtttcatatgtcatgctgatggaggtagttgctcagcatcattaggagcctgcaagcagttggatcaagccatcataccgaggttcagatattctctgaccattcaggtataagtttcaggactgagaacccctttctttggagctgcaccaatcgcattggcttgctgtaggacaccgagagtagcctttcaagaatttcagttgcagcagattacccagattctgttcctgattcccctaactatgtccgcaacagtggctatcaccctcttgaaggaatgccgagaccagagacgagttcgtgatacctgaactcaccagctgctgaaatagcaaggacaactgttgaggctaataacaatgcattgttgatattccctggcaccgttcattgtgaacctcacgaacaagtgtcatgggcagaatttcagtccgtgattgatgaatatggagacatattctttgaaatttatgatgacaagaatatcttgcggaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="34174" stop="30666"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33874" g_stop="33809" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33808" i_stop="32650" i_length="1159">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32649" g_stop="32526" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="193" r_length="127" r_score="0.952"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32525" i_stop="31575" i_length="951">
            <donor d_prob="0.741" d_score="0.96"/>
            <acceptor a_prob="0.799" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31574" g_stop="31343" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="431" r_length="238" r_score="0.948"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31342" i_stop="31210" i_length="133">
            <donor d_prob="0.999" d_score="0.92"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31209" g_stop="31107" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="534" r_length="103" r_score="0.981"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31106" i_stop="31011" i_length="96">
            <donor d_prob="0.829" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="31010" g_stop="30966" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="535" r_stop="579" r_length="45" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E253698" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E253698" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33874" e_stop="33809"/>
          <exon e_start="32649" e_stop="32526"/>
          <exon e_start="31574" e_stop="31343"/>
          <exon e_start="31209" e_stop="31107"/>
          <exon e_start="31010" e_stop="30966"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCATATCATTAATACTCTGTTTCTTGATGTTCATCTCCGCGCCTTCATCATCAATCTCCATCGGTAATCACTGAAATCATCTTTACTTTTTGATACAAAAGACAGAGGACTCAAAAAGTTTTCTTTTTTTTTTTCGTTCAAGAACCCTTTTTTATGTGCCTGTTAAAAGGGTTATTGATTTTATTCATGTTTTTTCACTTCAATTTTTTGTGGGGTTGACTTTTTATTTGAATAATTAGCACCCATTAGCAATAAATTTGATTTTTTTTGGGTGGTGGGGTGGTGGGGGTGGAGTTTTTTTCTTTCTGGTATACTGCTGTTGTATGTCATAGTTTCTTGTGTTGTCAAGGTGGTAGTATTTTTGAATGTCTGTGGACAAGGAGGTTGTTAGACTTGTCTTAAAATAAGTGTCACTTTAGCTCATTTCACACTCGTCATCAAGAAAAATATTAAATAGAAGAATTGAGCATTATTAACAAGAAGTAGTCTTCCAACATACTAAGTTTTGTATTGAAAGGTGACAATTTTGTTTGCTAAAGTGACAATTATTTTGGGACGGAGGGAGTAAATTCTATTGTAGTGGTTGTTGTTTGTCTTCACTATATTGCCTTAGAGGTTCTGTAATTCCACCAAATCACAAGTTTTGCTTCCTATATCTATAGGGTTAAGAAGAATTTGTGAGAACCACAAACTCTGCCTTTCTTCCTTCTACATTTCTCTGCAAATGAATATTTATGTATATCGTTTGTTGTTTTTCATTGCTTGAAACCCAGATAAGAGAAGGACAACTCTTTGTTAATAGTTTTTTAAAGTGTCATGGGTAACTGAATACCAAATATCTCGTAAACCTTCAACTCAATGAGATGTAGCTACGATTGTGCTATAGGTTTGTTCTCTTTATTTGGTGTTTAATGATGCATATAGAGAGTCTTAACATTCTTGTTTGGAAAGGGTAGGTCTGGGAGGTGGTATTGTGTCTCTTCTGGACCTTTTGAAATAAAAAAACGGAAGAGTTTGGAAGAGGTCTTACTTTTAGGCACAATTGATTAAATTGTTGTCTGATAACCAAAATAAAATTTACATGAAAGCAAGCTTACTTGTTCACATGATCTTAATGAGGGGATGCGTCTTCATTAGGTGTTATCATTTCTTTTTACTTTTTAAGTTTTCTGTGGTCCTTAGTTTGCCTTTTATTTTTAAAAAATATTGGCGACTGTTCCAGGT-CCCTCGCAATGTTTCATATGTCATGCTGATGGAGGTAGTTGCTCAGCATCATTAGGAG-CTGCAAGCAGTTGGATCAAGCCATCATA-CGAGGTTCAGATATTCTCTGACCATTCAGGTATAAGGTACATAGCTTGAGAATCCTTTTCCAATAATGACAAAGAAGCTTGACTTGACTGATATTTCTGATCCTCTGGGTTTCTGCTGCTTGTTGACCTAATTACCTTCCATAGTTAACTATTGGTGTTTGTAGTGTAAAATTCTCTTTTTTCTTTGGGAACTCTTAAGTCCGAAGCCAGTTCGTTGGAACCAATATGGCTCTGCTCTTGGAGACTGGTAAGAAGTAAGAACAAGATCAGAAATCATCTTAATCTTCTTGGTCTAGTTAGGAATGATCTCGATTTATTCTATTCCATTCCTCAATGTAATTTTGTTTGGTAAATTATGAGTTAATCTAGATTTTACAAACTCCTAGTTCAGCAAGTCTACTCCTATTCCATATTTGGAACTTACATGGCTATAAGATATTCAACATTTTACTTGTCAAATGGATGTATGGAAGACTGTACAGATGGAAGAAATTTAAATGACTAGTTAGAGAGAGTAGCTTCCTGACCTCCGTTGAGTCGGTCTTTTCCAATCCAAGTCAGCAACTCAGCACCATTTTCTACCTTCAGGCTATCACCAACCATTACTTCCCATATTTCCAGAACGCCTAGATGCTTGAGACTTCGCCAGAAAAACCCATCACCCAAAGAGGCAGGTGTAATAACTTTACCACTACTAGAGATGATTGTTTAGTCAAGTACTCTTTGAAAGATATTAGTTTTCTGCATATGGAGACTCTAGTTGTGTGCACTTTGTATTGATATTTACTTCCCAAATGCATTTGTGAACTTTGTATTGCTGTCGTGTTCTCTTTATTATTTTACCATAGTTCTCAAAAAAAAAAAAACACTCTAACCTTTTCACCTTTTTTACTGAAGGAAAAAAGTTTACTATTCTGGTTCTACTGTAGTTTGGCTTTTTCCAGATGAAACTATGTGTTCTTACACATGTGCTCCTCTCCTGTATAGTTTCAGGACTGAGAA-CCCTTTCTTTGGAGCTGCA-CAATCGCATTGGCTTGCTGTAGGACA-CGAGAGTAGCCTTTCAAGAATTTCAGTTGCAGCAGATTACCCAGATTCTGTTCCTGATTCCCCTAACTATGTCCGCAACAGTGGCTATCACCCTCTTGAAGGAATG-CGAGACCAGAGACGAGTTCGTGATA-CTGAACTCA-CAGCTGCTGAAATAGCAAGGACAACTGTTGAGGTTTGCGCTAATATATGCTATATAAATTAGATATTGTTCATTCTACATGCAAGTGAAAAAAGTTTGCATGGTATAAGTACGATTATATTTCTTTTGGATGGCTCAGATGGGGTATTTTTATTTCTAATTGTAGGCTAATAACAATGCATTGTTGATATTCCCTGGCACGGTTCATTGTGAACCTCACGAACAAGTGTCATGGGCAGAATTTCAGTACGTGATTGATGAATATGGAGGTTTGTCTGTTTCTGTTGCAGTGTGTCTCACAGTGTTGTAATTTGATCATTTCCCTTATTATGTTCATATTTGATGGTTTGCTTTCATGTGCTCAGACATATTCTTTGAAATTTATGATGACAAGAATATCTTGCGGAATC</genome_strand>
        <mrna_strand>GTTTCATATCATTAATACTCTGTTTCTTGATGTTCATCTCCGCGCCTTCATCATCAATCTCCATCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCCTCGCAATGTTTCATATGTCATGCTGATGGAGGTAGTTGCTCAGCATCATTAGGAGCCTGCAAGCAGTTGGATCAAGCCATCATACCGAGGTTCAGATATTCTCTGACCATTCAGGTATAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGGACTGAGAACCCCTTTCTTTGGAGCTGCACCAATCGCATTGGCTTGCTGTAGGACACCGAGAGTAGCCTTTCAAGAATTTCAGTTGCAGCAGATTACCCAGATTCTGTTCCTGATTCCCCTAACTATGTCCGCAACAGTGGCTATCACCCTCTTGAAGGAATGCCGAGACCAGAGACGAGTTCGTGATACCTGAACTCACCAGCTGCTGAAATAGCAAGGACAACTGTTGAG.....................................................................................................................................GCTAATAACAATGCATTGTTGATATTCCCTGGCACCGTTCATTGTGAACCTCACGAACAAGTGTCATGGGCAGAATTTCAGTCCGTGATTGATGAATATGGAG................................................................................................ACATATTCTTTGAAATTTATGATGACAAGAATATCTTGCGGAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E622737" ref_strand="+" ref_description="SGN-E622737 [73107]">
      <seq>cgacaaaaagatcttcgatacaattaacgttttcctcagtttcatttcattaatactacttcactctgtttcttgatgttcatctccgcgccttcatcatcaatctccatcggtccttcacaatgtttcatatgtcatgctgatggaggtagttgctcagcatcatttggagctacaagcagttggatcaaaccatcacacgaggttcagagattctctgaccattcaggtataagtttcaggactgagaaccctttcttcggagctgcacaatcgcattggcttgctgtaggacacgagagtagcctttcaagaatttcagttgcagcagattacccagattctgttcctgattcccctaactatgtcggcaacagtagctatcaccctcttgaaggaatgcgggaccagagaagagttcgtgatactgaactcacagctgctgaaatagcaaggacaactgttgaggctaatagcaatgcattgttgatattccctggcacggttcattgtgaacctcacgaacaagtgtcatgggcagaatttcagtatgtgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="34212" stop="30821"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33912" g_stop="33809" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="0.827"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33808" i_stop="32650" i_length="1159">
            <donor d_prob="0.993" d_score="0.87"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32649" g_stop="32526" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="236" r_length="124" r_score="0.944"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32525" i_stop="31575" i_length="951">
            <donor d_prob="0.741" d_score="0.94"/>
            <acceptor a_prob="0.799" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31574" g_stop="31343" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="468" r_length="232" r_score="0.978"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31342" i_stop="31210" i_length="133">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31209" g_stop="31121" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="557" r_length="89" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E622737" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E622737" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33912" e_stop="33809"/>
          <exon e_start="32649" e_stop="32526"/>
          <exon e_start="31574" e_stop="31343"/>
          <exon e_start="31209" e_stop="31121"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGACAAAAAGATCTTCGATTCAATTAACGTTTTCCTCAGTTTCATATCATT-A-A-TAC-T--CT--GTTTCTTGATGTTCATCTCCGCGCCTTCATCATCAATCTCCATCGGTAATCACTGAAATCATCTTTACTTTTTGATACAAAAGACAGAGGACTCAAAAAGTTTTCTTTTTTTTTTTCGTTCAAGAACCCTTTTTTATGTGCCTGTTAAAAGGGTTATTGATTTTATTCATGTTTTTTCACTTCAATTTTTTGTGGGGTTGACTTTTTATTTGAATAATTAGCACCCATTAGCAATAAATTTGATTTTTTTTGGGTGGTGGGGTGGTGGGGGTGGAGTTTTTTTCTTTCTGGTATACTGCTGTTGTATGTCATAGTTTCTTGTGTTGTCAAGGTGGTAGTATTTTTGAATGTCTGTGGACAAGGAGGTTGTTAGACTTGTCTTAAAATAAGTGTCACTTTAGCTCATTTCACACTCGTCATCAAGAAAAATATTAAATAGAAGAATTGAGCATTATTAACAAGAAGTAGTCTTCCAACATACTAAGTTTTGTATTGAAAGGTGACAATTTTGTTTGCTAAAGTGACAATTATTTTGGGACGGAGGGAGTAAATTCTATTGTAGTGGTTGTTGTTTGTCTTCACTATATTGCCTTAGAGGTTCTGTAATTCCACCAAATCACAAGTTTTGCTTCCTATATCTATAGGGTTAAGAAGAATTTGTGAGAACCACAAACTCTGCCTTTCTTCCTTCTACATTTCTCTGCAAATGAATATTTATGTATATCGTTTGTTGTTTTTCATTGCTTGAAACCCAGATAAGAGAAGGACAACTCTTTGTTAATAGTTTTTTAAAGTGTCATGGGTAACTGAATACCAAATATCTCGTAAACCTTCAACTCAATGAGATGTAGCTACGATTGTGCTATAGGTTTGTTCTCTTTATTTGGTGTTTAATGATGCATATAGAGAGTCTTAACATTCTTGTTTGGAAAGGGTAGGTCTGGGAGGTGGTATTGTGTCTCTTCTGGACCTTTTGAAATAAAAAAACGGAAGAGTTTGGAAGAGGTCTTACTTTTAGGCACAATTGATTAAATTGTTGTCTGATAACCAAAATAAAATTTACATGAAAGCAAGCTTACTTGTTCACATGATCTTAATGAGGGGATGCGTCTTCATTAGGTGTTATCATTTCTTTTTACTTTTTAAGTTTTCTGTGGTCCTTAGTTTGCCTTTTATTTTTAAAAAATATTGGCGACTGTTCCAGGTCCCTCGCAATGTTTCATATGTCATGCTGATGGAGGTAGTTGCTCAGCATCATTAGGAGCTGCAAGCAGTTGGATCAAGCCATCATACGAGGTTCAGATATTCTCTGACCATTCAGGTATAAGGTACATAGCTTGAGAATCCTTTTCCAATAATGACAAAGAAGCTTGACTTGACTGATATTTCTGATCCTCTGGGTTTCTGCTGCTTGTTGACCTAATTACCTTCCATAGTTAACTATTGGTGTTTGTAGTGTAAAATTCTCTTTTTTCTTTGGGAACTCTTAAGTCCGAAGCCAGTTCGTTGGAACCAATATGGCTCTGCTCTTGGAGACTGGTAAGAAGTAAGAACAAGATCAGAAATCATCTTAATCTTCTTGGTCTAGTTAGGAATGATCTCGATTTATTCTATTCCATTCCTCAATGTAATTTTGTTTGGTAAATTATGAGTTAATCTAGATTTTACAAACTCCTAGTTCAGCAAGTCTACTCCTATTCCATATTTGGAACTTACATGGCTATAAGATATTCAACATTTTACTTGTCAAATGGATGTATGGAAGACTGTACAGATGGAAGAAATTTAAATGACTAGTTAGAGAGAGTAGCTTCCTGACCTCCGTTGAGTCGGTCTTTTCCAATCCAAGTCAGCAACTCAGCACCATTTTCTACCTTCAGGCTATCACCAACCATTACTTCCCATATTTCCAGAACGCCTAGATGCTTGAGACTTCGCCAGAAAAACCCATCACCCAAAGAGGCAGGTGTAATAACTTTACCACTACTAGAGATGATTGTTTAGTCAAGTACTCTTTGAAAGATATTAGTTTTCTGCATATGGAGACTCTAGTTGTGTGCACTTTGTATTGATATTTACTTCCCAAATGCATTTGTGAACTTTGTATTGCTGTCGTGTTCTCTTTATTATTTTACCATAGTTCTCAAAAAAAAAAAAACACTCTAACCTTTTCACCTTTTTTACTGAAGGAAAAAAGTTTACTATTCTGGTTCTACTGTAGTTTGGCTTTTTCCAGATGAAACTATGTGTTCTTACACATGTGCTCCTCTCCTGTATAGTTTCAGGACTGAGAACCCTTTCTTTGGAGCTGCACAATCGCATTGGCTTGCTGTAGGACACGAGAGTAGCCTTTCAAGAATTTCAGTTGCAGCAGATTACCCAGATTCTGTTCCTGATTCCCCTAACTATGTCCGCAACAGTGGCTATCACCCTCTTGAAGGAATGCGAGACCAGAGACGAGTTCGTGATACTGAACTCACAGCTGCTGAAATAGCAAGGACAACTGTTGAGGTTTGCGCTAATATATGCTATATAAATTAGATATTGTTCATTCTACATGCAAGTGAAAAAAGTTTGCATGGTATAAGTACGATTATATTTCTTTTGGATGGCTCAGATGGGGTATTTTTATTTCTAATTGTAGGCTAATAACAATGCATTGTTGATATTCCCTGGCACGGTTCATTGTGAACCTCACGAACAAGTGTCATGGGCAGAATTTCAGTACGTGAT</genome_strand>
        <mrna_strand>CGACAAAAAGATCTTCGATACAATTAACGTTTTCCTCAGTTTCATTTCATTAATACTACTTCACTCTGTTTCTTGATGTTCATCTCCGCGCCTTCATCATCAATCTCCATCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCTTCACAATGTTTCATATGTCATGCTGATGGAGGTAGTTGCTCAGCATCATTTGGAGCTACAAGCAGTTGGATCAAACCATCACACGAGGTTCAGAGATTCTCTGACCATTCAGGTATAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGGACTGAGAACCCTTTCTTCGGAGCTGCACAATCGCATTGGCTTGCTGTAGGACACGAGAGTAGCCTTTCAAGAATTTCAGTTGCAGCAGATTACCCAGATTCTGTTCCTGATTCCCCTAACTATGTCGGCAACAGTAGCTATCACCCTCTTGAAGGAATGCGGGACCAGAGAAGAGTTCGTGATACTGAACTCACAGCTGCTGAAATAGCAAGGACAACTGTTGAG.....................................................................................................................................GCTAATAGCAATGCATTGTTGATATTCCCTGGCACGGTTCATTGTGAACCTCACGAACAAGTGTCATGGGCAGAATTTCAGTATGTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E310718" ref_strand="+" ref_description="SGN-E310718 [cLEZ-15-A20]">
      <seq>cgacaaaaagatcttcgattcaattaacgttttcctcagtttcatatcattaatactctgtttcttgatgttcatctccgcgccttcatcatcaatctccatcggtccctcgcaatgtttcatatgtcatgctgatggaggtagttgctcagcatcattaggagctgcaagcagttggatcaagccatcatacgagggtcagatattctctgaccattcaagtataagtttcaagactgagaaccctttctttggagctgcacaatcgcattggcttgctgtaagacacgagagtagcctttcaagaatttcagttgcagcagattacccagattctgttcctgattcccctaactatgtccgcaacagtggctatcaccctcttgaaggaatgcgagaccagagacgagttcgtgatactgaactcacagctgctgaaatagcaaggacaactgttgaggctaataacaatgcattgttgatattccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="34212" stop="30880"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33912" g_stop="33809" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33808" i_stop="32650" i_length="1159">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32649" g_stop="32526" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="228" r_length="124" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32525" i_stop="31575" i_length="951">
            <donor d_prob="0.741" d_score="0.96"/>
            <acceptor a_prob="0.799" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31574" g_stop="31343" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="460" r_length="232" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31342" i_stop="31210" i_length="133">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31209" g_stop="31180" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="490" r_length="30" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E310718" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>490</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E310718" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33912" e_stop="33809"/>
          <exon e_start="32649" e_stop="32526"/>
          <exon e_start="31574" e_stop="31343"/>
          <exon e_start="31209" e_stop="31180"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGACAAAAAGATCTTCGATTCAATTAACGTTTTCCTCAGTTTCATATCATTAATACTCTGTTTCTTGATGTTCATCTCCGCGCCTTCATCATCAATCTCCATCGGTAATCACTGAAATCATCTTTACTTTTTGATACAAAAGACAGAGGACTCAAAAAGTTTTCTTTTTTTTTTTCGTTCAAGAACCCTTTTTTATGTGCCTGTTAAAAGGGTTATTGATTTTATTCATGTTTTTTCACTTCAATTTTTTGTGGGGTTGACTTTTTATTTGAATAATTAGCACCCATTAGCAATAAATTTGATTTTTTTTGGGTGGTGGGGTGGTGGGGGTGGAGTTTTTTTCTTTCTGGTATACTGCTGTTGTATGTCATAGTTTCTTGTGTTGTCAAGGTGGTAGTATTTTTGAATGTCTGTGGACAAGGAGGTTGTTAGACTTGTCTTAAAATAAGTGTCACTTTAGCTCATTTCACACTCGTCATCAAGAAAAATATTAAATAGAAGAATTGAGCATTATTAACAAGAAGTAGTCTTCCAACATACTAAGTTTTGTATTGAAAGGTGACAATTTTGTTTGCTAAAGTGACAATTATTTTGGGACGGAGGGAGTAAATTCTATTGTAGTGGTTGTTGTTTGTCTTCACTATATTGCCTTAGAGGTTCTGTAATTCCACCAAATCACAAGTTTTGCTTCCTATATCTATAGGGTTAAGAAGAATTTGTGAGAACCACAAACTCTGCCTTTCTTCCTTCTACATTTCTCTGCAAATGAATATTTATGTATATCGTTTGTTGTTTTTCATTGCTTGAAACCCAGATAAGAGAAGGACAACTCTTTGTTAATAGTTTTTTAAAGTGTCATGGGTAACTGAATACCAAATATCTCGTAAACCTTCAACTCAATGAGATGTAGCTACGATTGTGCTATAGGTTTGTTCTCTTTATTTGGTGTTTAATGATGCATATAGAGAGTCTTAACATTCTTGTTTGGAAAGGGTAGGTCTGGGAGGTGGTATTGTGTCTCTTCTGGACCTTTTGAAATAAAAAAACGGAAGAGTTTGGAAGAGGTCTTACTTTTAGGCACAATTGATTAAATTGTTGTCTGATAACCAAAATAAAATTTACATGAAAGCAAGCTTACTTGTTCACATGATCTTAATGAGGGGATGCGTCTTCATTAGGTGTTATCATTTCTTTTTACTTTTTAAGTTTTCTGTGGTCCTTAGTTTGCCTTTTATTTTTAAAAAATATTGGCGACTGTTCCAGGTCCCTCGCAATGTTTCATATGTCATGCTGATGGAGGTAGTTGCTCAGCATCATTAGGAGCTGCAAGCAGTTGGATCAAGCCATCATACGAGGTTCAGATATTCTCTGACCATTCAGGTATAAGGTACATAGCTTGAGAATCCTTTTCCAATAATGACAAAGAAGCTTGACTTGACTGATATTTCTGATCCTCTGGGTTTCTGCTGCTTGTTGACCTAATTACCTTCCATAGTTAACTATTGGTGTTTGTAGTGTAAAATTCTCTTTTTTCTTTGGGAACTCTTAAGTCCGAAGCCAGTTCGTTGGAACCAATATGGCTCTGCTCTTGGAGACTGGTAAGAAGTAAGAACAAGATCAGAAATCATCTTAATCTTCTTGGTCTAGTTAGGAATGATCTCGATTTATTCTATTCCATTCCTCAATGTAATTTTGTTTGGTAAATTATGAGTTAATCTAGATTTTACAAACTCCTAGTTCAGCAAGTCTACTCCTATTCCATATTTGGAACTTACATGGCTATAAGATATTCAACATTTTACTTGTCAAATGGATGTATGGAAGACTGTACAGATGGAAGAAATTTAAATGACTAGTTAGAGAGAGTAGCTTCCTGACCTCCGTTGAGTCGGTCTTTTCCAATCCAAGTCAGCAACTCAGCACCATTTTCTACCTTCAGGCTATCACCAACCATTACTTCCCATATTTCCAGAACGCCTAGATGCTTGAGACTTCGCCAGAAAAACCCATCACCCAAAGAGGCAGGTGTAATAACTTTACCACTACTAGAGATGATTGTTTAGTCAAGTACTCTTTGAAAGATATTAGTTTTCTGCATATGGAGACTCTAGTTGTGTGCACTTTGTATTGATATTTACTTCCCAAATGCATTTGTGAACTTTGTATTGCTGTCGTGTTCTCTTTATTATTTTACCATAGTTCTCAAAAAAAAAAAAACACTCTAACCTTTTCACCTTTTTTACTGAAGGAAAAAAGTTTACTATTCTGGTTCTACTGTAGTTTGGCTTTTTCCAGATGAAACTATGTGTTCTTACACATGTGCTCCTCTCCTGTATAGTTTCAGGACTGAGAACCCTTTCTTTGGAGCTGCACAATCGCATTGGCTTGCTGTAGGACACGAGAGTAGCCTTTCAAGAATTTCAGTTGCAGCAGATTACCCAGATTCTGTTCCTGATTCCCCTAACTATGTCCGCAACAGTGGCTATCACCCTCTTGAAGGAATGCGAGACCAGAGACGAGTTCGTGATACTGAACTCACAGCTGCTGAAATAGCAAGGACAACTGTTGAGGTTTGCGCTAATATATGCTATATAAATTAGATATTGTTCATTCTACATGCAAGTGAAAAAAGTTTGCATGGTATAAGTACGATTATATTTCTTTTGGATGGCTCAGATGGGGTATTTTTATTTCTAATTGTAGGCTAATAACAATGCATTGTTGATATTCCCT</genome_strand>
        <mrna_strand>CGACAAAAAGATCTTCGATTCAATTAACGTTTTCCTCAGTTTCATATCATTAATACTCTGTTTCTTGATGTTCATCTCCGCGCCTTCATCATCAATCTCCATCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCTCGCAATGTTTCATATGTCATGCTGATGGAGGTAGTTGCTCAGCATCATTAGGAGCTGCAAGCAGTTGGATCAAGCCATCATACGAGGGTCAGATATTCTCTGACCATTCAAGTATAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAAGACTGAGAACCCTTTCTTTGGAGCTGCACAATCGCATTGGCTTGCTGTAAGACACGAGAGTAGCCTTTCAAGAATTTCAGTTGCAGCAGATTACCCAGATTCTGTTCCTGATTCCCCTAACTATGTCCGCAACAGTGGCTATCACCCTCTTGAAGGAATGCGAGACCAGAGACGAGTTCGTGATACTGAACTCACAGCTGCTGAAATAGCAAGGACAACTGTTGAG.....................................................................................................................................GCTAATAACAATGCATTGTTGATATTCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E249528" ref_strand="+" ref_description="SGN-E249528 [cLEF-56-N15]">
      <seq>aaaagatcttcgattcaattaacgttttcctcagtttcaggtcattaatactctgtttcttgatgttcatctccgcgccttcatcatcaatctccatcggtccctcgcaatgtttcatatgtcatgctgatggaggtagttgctcagcatcattaggagctgcaagcagttggatcaagccatcatacgaggttcagatattctctgaccattcagtttcaggactgagaaccctttctttggagctgcacaatcgcattggcttgctgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="34207" stop="31221"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33907" g_stop="33809" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33808" i_stop="32650" i_length="1159">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32649" g_stop="32533" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="216" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32532" i_stop="31575" i_length="958">
            <donor d_prob="0.887" d_score="1.00"/>
            <acceptor a_prob="0.799" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31574" g_stop="31521" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="270" r_length="54" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E249528" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>270</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E249528" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33907" e_stop="33809"/>
          <exon e_start="32649" e_stop="32533"/>
          <exon e_start="31574" e_stop="31521"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGATCTTCGATTCAATTAACGTTTTCCTCAGTTTCATATCATTAATACTCTGTTTCTTGATGTTCATCTCCGCGCCTTCATCATCAATCTCCATCGGTAATCACTGAAATCATCTTTACTTTTTGATACAAAAGACAGAGGACTCAAAAAGTTTTCTTTTTTTTTTTCGTTCAAGAACCCTTTTTTATGTGCCTGTTAAAAGGGTTATTGATTTTATTCATGTTTTTTCACTTCAATTTTTTGTGGGGTTGACTTTTTATTTGAATAATTAGCACCCATTAGCAATAAATTTGATTTTTTTTGGGTGGTGGGGTGGTGGGGGTGGAGTTTTTTTCTTTCTGGTATACTGCTGTTGTATGTCATAGTTTCTTGTGTTGTCAAGGTGGTAGTATTTTTGAATGTCTGTGGACAAGGAGGTTGTTAGACTTGTCTTAAAATAAGTGTCACTTTAGCTCATTTCACACTCGTCATCAAGAAAAATATTAAATAGAAGAATTGAGCATTATTAACAAGAAGTAGTCTTCCAACATACTAAGTTTTGTATTGAAAGGTGACAATTTTGTTTGCTAAAGTGACAATTATTTTGGGACGGAGGGAGTAAATTCTATTGTAGTGGTTGTTGTTTGTCTTCACTATATTGCCTTAGAGGTTCTGTAATTCCACCAAATCACAAGTTTTGCTTCCTATATCTATAGGGTTAAGAAGAATTTGTGAGAACCACAAACTCTGCCTTTCTTCCTTCTACATTTCTCTGCAAATGAATATTTATGTATATCGTTTGTTGTTTTTCATTGCTTGAAACCCAGATAAGAGAAGGACAACTCTTTGTTAATAGTTTTTTAAAGTGTCATGGGTAACTGAATACCAAATATCTCGTAAACCTTCAACTCAATGAGATGTAGCTACGATTGTGCTATAGGTTTGTTCTCTTTATTTGGTGTTTAATGATGCATATAGAGAGTCTTAACATTCTTGTTTGGAAAGGGTAGGTCTGGGAGGTGGTATTGTGTCTCTTCTGGACCTTTTGAAATAAAAAAACGGAAGAGTTTGGAAGAGGTCTTACTTTTAGGCACAATTGATTAAATTGTTGTCTGATAACCAAAATAAAATTTACATGAAAGCAAGCTTACTTGTTCACATGATCTTAATGAGGGGATGCGTCTTCATTAGGTGTTATCATTTCTTTTTACTTTTTAAGTTTTCTGTGGTCCTTAGTTTGCCTTTTATTTTTAAAAAATATTGGCGACTGTTCCAGGTCCCTCGCAATGTTTCATATGTCATGCTGATGGAGGTAGTTGCTCAGCATCATTAGGAGCTGCAAGCAGTTGGATCAAGCCATCATACGAGGTTCAGATATTCTCTGACCATTCAGGTATAAGGTACATAGCTTGAGAATCCTTTTCCAATAATGACAAAGAAGCTTGACTTGACTGATATTTCTGATCCTCTGGGTTTCTGCTGCTTGTTGACCTAATTACCTTCCATAGTTAACTATTGGTGTTTGTAGTGTAAAATTCTCTTTTTTCTTTGGGAACTCTTAAGTCCGAAGCCAGTTCGTTGGAACCAATATGGCTCTGCTCTTGGAGACTGGTAAGAAGTAAGAACAAGATCAGAAATCATCTTAATCTTCTTGGTCTAGTTAGGAATGATCTCGATTTATTCTATTCCATTCCTCAATGTAATTTTGTTTGGTAAATTATGAGTTAATCTAGATTTTACAAACTCCTAGTTCAGCAAGTCTACTCCTATTCCATATTTGGAACTTACATGGCTATAAGATATTCAACATTTTACTTGTCAAATGGATGTATGGAAGACTGTACAGATGGAAGAAATTTAAATGACTAGTTAGAGAGAGTAGCTTCCTGACCTCCGTTGAGTCGGTCTTTTCCAATCCAAGTCAGCAACTCAGCACCATTTTCTACCTTCAGGCTATCACCAACCATTACTTCCCATATTTCCAGAACGCCTAGATGCTTGAGACTTCGCCAGAAAAACCCATCACCCAAAGAGGCAGGTGTAATAACTTTACCACTACTAGAGATGATTGTTTAGTCAAGTACTCTTTGAAAGATATTAGTTTTCTGCATATGGAGACTCTAGTTGTGTGCACTTTGTATTGATATTTACTTCCCAAATGCATTTGTGAACTTTGTATTGCTGTCGTGTTCTCTTTATTATTTTACCATAGTTCTCAAAAAAAAAAAAACACTCTAACCTTTTCACCTTTTTTACTGAAGGAAAAAAGTTTACTATTCTGGTTCTACTGTAGTTTGGCTTTTTCCAGATGAAACTATGTGTTCTTACACATGTGCTCCTCTCCTGTATAGTTTCAGGACTGAGAACCCTTTCTTTGGAGCTGCACAATCGCATTGGCTTGCTGT</genome_strand>
        <mrna_strand>AAAAGATCTTCGATTCAATTAACGTTTTCCTCAGTTTCAGGTCATTAATACTCTGTTTCTTGATGTTCATCTCCGCGCCTTCATCATCAATCTCCATCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCTCGCAATGTTTCATATGTCATGCTGATGGAGGTAGTTGCTCAGCATCATTAGGAGCTGCAAGCAGTTGGATCAAGCCATCATACGAGGTTCAGATATTCTCTGACCATTCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGGACTGAGAACCCTTTCTTTGGAGCTGCACAATCGCATTGGCTTGCTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E707527" ref_strand="+" ref_description="SGN-E707527 [FA33BA12]">
      <seq>cccattatgagcagtattaagtccattagagtttagttttcttgatgttaattgtgggtttaatcgattcttgatgcattagctgttaatggtcatgcggggttttagctatttgcaaaatctgtggcctttttctgtattaaaccccactgatttgagaatttcagatgggtttgtgaggaaattaggaatacccgaaactaccaaacagttcgtttatgcaattcaagaacctgaatccaaggctgttatatacgtattgtgtgtgcagaatttatctgagcgatctgctctagatgcggagtgtttgattagggaagttaagcctgaggctgtagttgtccaagtgggtaattctggagatggtcatgaaaatgagggaattgggttgagtgatggtggtgatttagaggaggaggaggagtcggtaccaacttcgtcgattgaggttttgaagaggtgttttgtgcataaaactagtaaggagaagtatgagaatatggcggggcgagttgttttgagagagatatttggggttgggtttgatgggcatttccctgctgccaagaaagcagctgaagaggttggttcggctttcttgttgcttgagtcaccgtttgttcaatgcagtttgtctggtgagccttctgatgtgggggatgaggggttcgagaataagtttggagtgtttggtttggaggacgggtatgagaataggtttggagtgtttggcttagaggctagtaatagtttggttcctctaaggacagggtta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="36176" stop="37549"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36475" g_stop="37249" g_length="775"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="775" r_length="775" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E707527" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>775</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E707527" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36475" e_stop="37249"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCATAATCATCAGTATTAAGTCCATTAGAGTTTAGTTTTCTTGATGTTAATTGTGGGTTTAATCGATTCTTGATGCATTAGCTGTTAATGGTCATGCGGGGTTTTAGCTATTTGCAAAATCTGTGGCCTTTTTCTGTATTAAACCCCACTGATTTGAGAATTTCAGATGGGTTTGTGAGGAAATTAGGAATACCCGAAACTACCAAACAGTTCGTTTATGCAATTCAAGAACCTGAATCCAAGGCTGTTATATACGTATTGTGTGTGCAGAATTTATCTGAGCGATCTGCTCTAGATGCGGAGTGTTTGATTAGGGAAGTTAAGCCTGAGGCTGTAGTTGTCCAAGTGGGTAATTCTGGAGATGGTCATGAAAATGAGGGAATTGGGTTGAGTGATGGTGGTGATTTAGAGGAGGAGGAGGAGTCGGTACCAACTTCGTCGATTGAGGTTTTGAAGAGGTGTTTTGTGCATAAAACTAGTAAGGAGAAGTATGAGAATATGGCGGGGCGAGTTGTTTTGAGAGAGATATTTGGGGTTGGGTTTGATGGGCATTTCCCTGCTGCCAAGAAAGCAGCTGAAGAGGTTGGTTCGGCTTTCTTGTTGCTTGAGTCACCGTTTGTTCAATGCAGTTTGTCTGGTGAGCCTTCTGATGTGGGGGATGAGGGGTTCGAGAATAAGTTTGGAGTGTTTGGTTTGGAGGACGGGTATGAGAATAGGTTTGGAGTGTTTGGCTTAGAGGCTAGTAATAGTTTGGTTCCTCTAAGGACAGGGTTA</genome_strand>
        <mrna_strand>CCCATTATGAGCAGTATTAAGTCCATTAGAGTTTAGTTTTCTTGATGTTAATTGTGGGTTTAATCGATTCTTGATGCATTAGCTGTTAATGGTCATGCGGGGTTTTAGCTATTTGCAAAATCTGTGGCCTTTTTCTGTATTAAACCCCACTGATTTGAGAATTTCAGATGGGTTTGTGAGGAAATTAGGAATACCCGAAACTACCAAACAGTTCGTTTATGCAATTCAAGAACCTGAATCCAAGGCTGTTATATACGTATTGTGTGTGCAGAATTTATCTGAGCGATCTGCTCTAGATGCGGAGTGTTTGATTAGGGAAGTTAAGCCTGAGGCTGTAGTTGTCCAAGTGGGTAATTCTGGAGATGGTCATGAAAATGAGGGAATTGGGTTGAGTGATGGTGGTGATTTAGAGGAGGAGGAGGAGTCGGTACCAACTTCGTCGATTGAGGTTTTGAAGAGGTGTTTTGTGCATAAAACTAGTAAGGAGAAGTATGAGAATATGGCGGGGCGAGTTGTTTTGAGAGAGATATTTGGGGTTGGGTTTGATGGGCATTTCCCTGCTGCCAAGAAAGCAGCTGAAGAGGTTGGTTCGGCTTTCTTGTTGCTTGAGTCACCGTTTGTTCAATGCAGTTTGTCTGGTGAGCCTTCTGATGTGGGGGATGAGGGGTTCGAGAATAAGTTTGGAGTGTTTGGTTTGGAGGACGGGTATGAGAATAGGTTTGGAGTGTTTGGCTTAGAGGCTAGTAATAGTTTGGTTCCTCTAAGGACAGGGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E727850" ref_strand="+" ref_description="SGN-E727850 [LA15DG05]">
      <seq>atagctttgaacaatgctggtcggctcccacttagcaaaatggggagtcatacaactgaattttctgagctttgtattgaggacaagtcccacgcccttcttgcacaggccctccgaagccagaccgagaagttcaaatcaatagttgcagtagtagatgccagtggcttagctggactaaggaagcactggagtgttaatgtacctgaggaagttaaggaaattgttgatcagctggtcactgactctgaaaacgatggggacaattcaagccaaagtgacaaaaaagggttactagctgttaagccagtggtagctgttggggctggtgcaactgcagttctgggagcttcttcattttctaaagttgttcctgcatctacaatattgaaggttgtcaccttcaaagtccccgcttctctaaaaatcatgattactcaaacccaaaaggcccttgctcttgcatttggaaagtcaaacgtagcaggccctgcaatggcaagttctggtgtcaaatcatctgtccttaaggcaactgcttctgcagagaaaatccgtgccatggcgcatggcgttatagcctctgcagagaaaactagcatctcagccatgagaacggcattctacgaaatcatgaggaaacaccgagtacgacccgttggctttctgccatgggccacctttggatgcagtgtagttacttgtgcgagcttgcttgtgtatggagatggaatagaatgtgctgctgaatctcttccagcagctccttcaatcgccagtttgggtcgtggaatccaaagtttgcatcaagcttccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="37286" stop="38703"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37586" g_stop="38403" g_length="818"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="818" r_length="818" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E727850" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>818</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E727850" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37586" e_stop="38403"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAGCTTTGAACAATGCTGGTCGGCTCCCACTTAGCAAAATGGGGAGTCATACAACTGAATTTTCTGAGCTTTGTATTGAGGACAAGTCCCACGCCCTTCTTGCACAGGCCCTCCGAAGCCAGACCGAGAAGTTCAAATCAATAGTTGCAGTAGTAGATGCCAGTGGCTTAGCTGGACTAAGGAAGCACTGGAGTGTTAATGTACCTGAGGAAGTTAAGGAAATTGTTGATCAGCTGGTCACTGACTCTGAAAACGATGGGGACAATTCAAGCCAAAGTGACAAAAAAGGGTTACTAGCTGTTAAGCCAGTGGTAGCTGTTGGGGCTGGTGCAACTGCAGTTCTGGGAGCTTCTTCATTTTCTAAAGTTGTTCCTGCATCTACAATATTGAAGGTTGTCACCTTCAAAGTCCCCGCTTCTCTAAAAATCATGATTACTCAAACCCAAAAGGCCCTTGCTCTTGCATTTGGAAAGTCAAACGTAGCAGGCCCTGCAATGGCAAGTTCTGGTGTCAAATCATCTGTCCTTAAGGCAACTGCTTCTGCAGAGAAAATCCGTGCCATGGCGCATGGCGTTATAGCCTCTGCAGAGAAAACTAGCATCTCAGCCATGAGAACGGCATTCTACGAAATCATGAGGAAACACCGAGTACGACCCGTTGGCTTTCTGCCATGGGCCACCTTTGGATGCAGTGTAGTTACTTGTGCGAGCTTGCTTGTGTATGGAGATGGAATAGAATGTGCTGCTGAATCTCTTCCAGCAGCTCCTTCAATCGCCAGTTTGGGTCGTGGAATCCAAAGTTTGCATCAAGCTTCCCT</genome_strand>
        <mrna_strand>ATAGCTTTGAACAATGCTGGTCGGCTCCCACTTAGCAAAATGGGGAGTCATACAACTGAATTTTCTGAGCTTTGTATTGAGGACAAGTCCCACGCCCTTCTTGCACAGGCCCTCCGAAGCCAGACCGAGAAGTTCAAATCAATAGTTGCAGTAGTAGATGCCAGTGGCTTAGCTGGACTAAGGAAGCACTGGAGTGTTAATGTACCTGAGGAAGTTAAGGAAATTGTTGATCAGCTGGTCACTGACTCTGAAAACGATGGGGACAATTCAAGCCAAAGTGACAAAAAAGGGTTACTAGCTGTTAAGCCAGTGGTAGCTGTTGGGGCTGGTGCAACTGCAGTTCTGGGAGCTTCTTCATTTTCTAAAGTTGTTCCTGCATCTACAATATTGAAGGTTGTCACCTTCAAAGTCCCCGCTTCTCTAAAAATCATGATTACTCAAACCCAAAAGGCCCTTGCTCTTGCATTTGGAAAGTCAAACGTAGCAGGCCCTGCAATGGCAAGTTCTGGTGTCAAATCATCTGTCCTTAAGGCAACTGCTTCTGCAGAGAAAATCCGTGCCATGGCGCATGGCGTTATAGCCTCTGCAGAGAAAACTAGCATCTCAGCCATGAGAACGGCATTCTACGAAATCATGAGGAAACACCGAGTACGACCCGTTGGCTTTCTGCCATGGGCCACCTTTGGATGCAGTGTAGTTACTTGTGCGAGCTTGCTTGTGTATGGAGATGGAATAGAATGTGCTGCTGAATCTCTTCCAGCAGCTCCTTCAATCGCCAGTTTGGGTCGTGGAATCCAAAGTTTGCATCAAGCTTCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E354574" ref_strand="+" ref_description="SGN-E354574 [cTOS-17-M20]">
      <seq>ggcccttgctcttgcatttggaaagtcaaacgtagcaggccctgcaatggcaagttctggtgtcaaatcatctgtccttaaggcaactgcttctgcagagaaaatccgtgccatggcgcatggcgttatagcctctgcagagaaaactagcatctcagccatgagaacggcattctacgaaatcatgaggaaacaccgagtacgacccgttggctttctgccatgggccacctttggatgcagtgtagttacttgtgcgagcttgcttgtgtatggagatggaatagaatgtgctgctgaatctcttccagcagctccttcaatcgccagtttgggtcgtggaatccaaagtttgcatcaagcttccctggcagtgaaacaaacagaaaattccaggatacaaaagtcaatagagtctcttgtgtacagatttaagaagataagtatctcataaagtgttcagttcctttctcaagtacatgagtcaatagttgagctctaactttttcattcaaatagattttagcaaagaggttgtgcaatttctgatacctgggatttgtctgtagcatggcaagaagttccaataaaatgtgattggagtttggatgatttttcaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="37735" stop="38956"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38035" g_stop="38665" g_length="631"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="631" r_length="631" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E354574" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>631</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354574" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38035" e_stop="38665"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCCCTTGCTCTTGCATTTGGAAAGTCAAACGTAGCAGGCCCTGCAATGGCAAGTTCTGGTGTCAAATCATCTGTCCTTAAGGCAACTGCTTCTGCAGAGAAAATCCGTGCCATGGCGCATGGCGTTATAGCCTCTGCAGAGAAAACTAGCATCTCAGCCATGAGAACGGCATTCTACGAAATCATGAGGAAACACCGAGTACGACCCGTTGGCTTTCTGCCATGGGCCACCTTTGGATGCAGTGTAGTTACTTGTGCGAGCTTGCTTGTGTATGGAGATGGAATAGAATGTGCTGCTGAATCTCTTCCAGCAGCTCCTTCAATCGCCAGTTTGGGTCGTGGAATCCAAAGTTTGCATCAAGCTTCCCTGGCAGTGAAACAAACAGAAAATTCCAGGATACAAAAGTCAATAGAGTCTCTTGTGTACAGATTTAAGAAGATAAGTATCTCATAAAGTGTTCAGTTCCTTTCTCAAGTACATGAGTCAATAGTTGAGCTCTAACTTTTTCATTCAAATAGATTTTAGCAAAGAGGTTGTGCAATTTCTGATACCTGGGATTTGTCTGTAGCATGGCAAGAAGTTCCAATAAAATGTGATTGGAGTTTGGATGATTTTTCAACATGTTGATTA</genome_strand>
        <mrna_strand>GGCCCTTGCTCTTGCATTTGGAAAGTCAAACGTAGCAGGCCCTGCAATGGCAAGTTCTGGTGTCAAATCATCTGTCCTTAAGGCAACTGCTTCTGCAGAGAAAATCCGTGCCATGGCGCATGGCGTTATAGCCTCTGCAGAGAAAACTAGCATCTCAGCCATGAGAACGGCATTCTACGAAATCATGAGGAAACACCGAGTACGACCCGTTGGCTTTCTGCCATGGGCCACCTTTGGATGCAGTGTAGTTACTTGTGCGAGCTTGCTTGTGTATGGAGATGGAATAGAATGTGCTGCTGAATCTCTTCCAGCAGCTCCTTCAATCGCCAGTTTGGGTCGTGGAATCCAAAGTTTGCATCAAGCTTCCCTGGCAGTGAAACAAACAGAAAATTCCAGGATACAAAAGTCAATAGAGTCTCTTGTGTACAGATTTAAGAAGATAAGTATCTCATAAAGTGTTCAGTTCCTTTCTCAAGTACATGAGTCAATAGTTGAGCTCTAACTTTTTCATTCAAATAGATTTTAGCAAAGAGGTTGTGCAATTTCTGATACCTGGGATTTGTCTGTAGCATGGCAAGAAGTTCCAATAAAATGTGATTGGAGTTTGGATGATTTTTCAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E354305" ref_strand="+" ref_description="SGN-E354305 [cTOS-16-H20]">
      <seq>gcgcatggcgttatagcctctgcagagaaaactagcatctcagccatgagaacggcattctacgaaatcatgaggaaacaccgagtacgacccgttggctttctgccatgggccacctttggatgcagtgtagttacttgtgcgagcttgcttgtgtatggagatggaatagaatgtgctgctgaatctcttccagcagctccttcaatcgccagtttgggtcgtggaatccaaagtttgcatcaagcttccctggcagtgaaacaaacagaaaattccaggatacaaaagtcaatagagtctcttgtgtacagatttaagaagataagtatctcataaagtgttcagttcctttctcaagtacatgagtcaatagttgagctctaactttttcattcaaatagattttagcaaagaggttgtgcaatttctgatacctgggatttgtctgtagcatggcaagaagttccaataaaatgtgattggagtttggatgatttttcaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="37850" stop="38956"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38150" g_stop="38655" g_length="506"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="506" r_length="506" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E354305" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>506</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354305" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38150" e_stop="38655"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGCATGGCGTTATAGCCTCTGCAGAGAAAACTAGCATCTCAGCCATGAGAACGGCATTCTACGAAATCATGAGGAAACACCGAGTACGACCCGTTGGCTTTCTGCCATGGGCCACCTTTGGATGCAGTGTAGTTACTTGTGCGAGCTTGCTTGTGTATGGAGATGGAATAGAATGTGCTGCTGAATCTCTTCCAGCAGCTCCTTCAATCGCCAGTTTGGGTCGTGGAATCCAAAGTTTGCATCAAGCTTCCCTGGCAGTGAAACAAACAGAAAATTCCAGGATACAAAAGTCAATAGAGTCTCTTGTGTACAGATTTAAGAAGATAAGTATCTCATAAAGTGTTCAGTTCCTTTCTCAAGTACATGAGTCAATAGTTGAGCTCTAACTTTTTCATTCAAATAGATTTTAGCAAAGAGGTTGTGCAATTTCTGATACCTGGGATTTGTCTGTAGCATGGCAAGAAGTTCCAATAAAATGTGATTGGAGTTTGGATGATTTTTCAAC</genome_strand>
        <mrna_strand>GCGCATGGCGTTATAGCCTCTGCAGAGAAAACTAGCATCTCAGCCATGAGAACGGCATTCTACGAAATCATGAGGAAACACCGAGTACGACCCGTTGGCTTTCTGCCATGGGCCACCTTTGGATGCAGTGTAGTTACTTGTGCGAGCTTGCTTGTGTATGGAGATGGAATAGAATGTGCTGCTGAATCTCTTCCAGCAGCTCCTTCAATCGCCAGTTTGGGTCGTGGAATCCAAAGTTTGCATCAAGCTTCCCTGGCAGTGAAACAAACAGAAAATTCCAGGATACAAAAGTCAATAGAGTCTCTTGTGTACAGATTTAAGAAGATAAGTATCTCATAAAGTGTTCAGTTCCTTTCTCAAGTACATGAGTCAATAGTTGAGCTCTAACTTTTTCATTCAAATAGATTTTAGCAAAGAGGTTGTGCAATTTCTGATACCTGGGATTTGTCTGTAGCATGGCAAGAAGTTCCAATAAAATGTGATTGGAGTTTGGATGATTTTTCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E341400" ref_strand="+" ref_description="SGN-E341400 [cTOE-23-F9]">
      <seq>tgagaaaaaaggcaagcaaatagcaattgaaagctgctctgttttgcttcacctatctgcttctgcaaatccggccatttctgtgtatatatatagatagaaggtgaaaaggatgatgtgggttcgatcgattcggcggccattatcgtcgttggttctacttcagtcgcgtgccccgaattattcctcattgtcagcttcagcagctgcagtagaagcggaacgatgtataaaggaaggacccagaaataactggactagagatgaaatcaagtctatttacgattcaccactcctcgatctcctctttcatggcgctcaagtacatagacattctcataactttagagaagtacagcagtgcactttgctgtctattaagacagggggatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="47690" stop="49790"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47990" g_stop="48305" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="316" r_length="316" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48306" i_stop="49413" i_length="1108">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49414" g_stop="49490" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="393" r_length="77" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E341400" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>393</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E341400" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47990" e_stop="48305"/>
          <exon e_start="49414" e_stop="49490"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGAAAAAAGGCAAGCAAATAGCAATTGAAAGCTGCTCTGTTTTGCTTCACCTATCTGCTTCTGCAAATCCGGCCATTTCTGTGTATATATATAGATAGAAGGTGAAAAGGATGATGTGGGTTCGATCGATTCGGCGGCCATTATCGTCGTTGGTTCTACTTCAGTCGCGTGCCCCGAATTATTCCTCATTGTCAGCTTCAGCAGCTGCAGTAGAAGCGGAACGATGTATAAAGGAAGGACCCAGAAATAACTGGACTAGAGATGAAATCAAGTCTATTTACGATTCACCACTCCTCGATCTCCTCTTTCATGGCGTCCGTATTCTCTTCTCTCTCCTTTTGTTTTTAATTTAATTATGTTTGATTTTGAATCATTTGGGTCACTGCATTGGTTCTATTTTGTGAAGCTTTGTCTATAGTTAATTGGCTTTACTATACATCAATCACAAAAATAGTATTTTTTTAAATCTATGGGGGGTTTTGTTCTGAGGTTTAGCAAGGGTGTTTTTGGTTTGATTTTCTGTTACTGTGCTTATGTGCAGTTGATTTTTTGTATGGCAGAAATATTGATGGAACAAACATTTTGGATTACCTTGAGTACTGAAAGAAAGAAATGTCTTTCATCATTTTTCTTTACAAACATCTTAGATGGAAATATTTTTGTGGATCATTTTCAGTGTTTGGTGGGATGTAGAAGTAGGTGACAACATGATAATTGTACAAAGTGTAGGATAGGTTTGTTGTTGTTGTTAGGTACTCTTCTCTGTCCAATTGTTGTGCACTTTTGACTTGGCACAGGGATTAAAAAGTAGTAGCTATTAAATTTAAGTCATGTAAACACTGATAAATGAATGCTATTTAAAAGCAAGGTTAAAATAGACACGAAATGGTAAATTATTCGTTGATTTTATAATTGTTGGACATCCCAAAACAGTATAGTGGACAAGTAAAGATGGACGGAGGGAGTATTAAACGGTTTTAACAATGCCTAGGTGTTGATTGAGACAAATGAAATTAGATCAGTTGAGAAATTTGTTAAGAGAGTGTTTTTCACCCATAAGAGTGAGGAAATATTTTCCTAATTGTGGTGGAAGACATCTTCCTTGAAAAAATGTTTTTGAGGGTAACATTCTCCCATTGTATCAGATATAATTGATTTACAAATATCTCAATTCTTACAACATATGAATACTTCAATCAACACATTATCAACCTTTAACTCAAAATGCTAAATGCTATCCCACTGACCTGAAATTTTTATGATTCATGCCAAAAAAACAACTGAAGAATGTGTTTCTTTTAATTTCTGTTTCTAATTACTTTGGAGCTTGCACCTTAATTGTTTTCTGTTAGTTTAGTGAGGCTCTCTAATTTCTGGTTATGATACTTTTTCATTTTCATGAAAAAAAATATTATTTTACAGGCTCAAGTACATAGACATTCTCATAACTTTAGAGAAGTACAGCAGTGCACTTTGCTGTCTATTAAGACAGGGGGATG</genome_strand>
        <mrna_strand>TGAGAAAAAAGGCAAGCAAATAGCAATTGAAAGCTGCTCTGTTTTGCTTCACCTATCTGCTTCTGCAAATCCGGCCATTTCTGTGTATATATATAGATAGAAGGTGAAAAGGATGATGTGGGTTCGATCGATTCGGCGGCCATTATCGTCGTTGGTTCTACTTCAGTCGCGTGCCCCGAATTATTCCTCATTGTCAGCTTCAGCAGCTGCAGTAGAAGCGGAACGATGTATAAAGGAAGGACCCAGAAATAACTGGACTAGAGATGAAATCAAGTCTATTTACGATTCACCACTCCTCGATCTCCTCTTTCATGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGTACATAGACATTCTCATAACTTTAGAGAAGTACAGCAGTGCACTTTGCTGTCTATTAAGACAGGGGGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E315090" ref_strand="+" ref_description="SGN-E315090 [cTOA-24-C9]">
      <seq>aagcaaatagcaattgaaagctgctctgttttgcttcacctatctgcttctgcaaatccggccatttctgtgtatatatatagatagaaggtgaaaaggatgatgtgggttcgatcgattcggcggccattatcgtcgttggttctacttcagtcgcgtgccccgaattattcctcattgtcagcttcagcagctgcagtagaagcggaacgatgtataaaggaaggacccagaaataactggactagagatgaaatcaagtctatttacgattcaccactcctcgatctcctctttcatggcgctcaagtacatagacattctcataactttagagaagtacagcagtgcactttgctgtctattaagacagggggatgcagtgaagattgttcgtattgtcctcaatcgtctaggtacaacacaggactgaaagcacagaaacttatgaataaggatgcagtcctggaagcagcaagaaaggcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="47703" stop="49894"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48003" g_stop="48305" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="303" r_length="303" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48306" i_stop="49413" i_length="1108">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49414" g_stop="49593" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="483" r_length="180" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E315090" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>483</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E315090" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48003" e_stop="48305"/>
          <exon e_start="49414" e_stop="49593"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCAAATAGCAATTGAAAGCTGCTCTGTTTTGCTTCACCTATCTGCTTCTGCAAATCCGGCCATTTCTGTGTATATATATAGATAGAAGGTGAAAAGGATGATGTGGGTTCGATCGATTCGGCGGCCATTATCGTCGTTGGTTCTACTTCAGTCGCGTGCCCCGAATTATTCCTCATTGTCAGCTTCAGCAGCTGCAGTAGAAGCGGAACGATGTATAAAGGAAGGACCCAGAAATAACTGGACTAGAGATGAAATCAAGTCTATTTACGATTCACCACTCCTCGATCTCCTCTTTCATGGCGTCCGTATTCTCTTCTCTCTCCTTTTGTTTTTAATTTAATTATGTTTGATTTTGAATCATTTGGGTCACTGCATTGGTTCTATTTTGTGAAGCTTTGTCTATAGTTAATTGGCTTTACTATACATCAATCACAAAAATAGTATTTTTTTAAATCTATGGGGGGTTTTGTTCTGAGGTTTAGCAAGGGTGTTTTTGGTTTGATTTTCTGTTACTGTGCTTATGTGCAGTTGATTTTTTGTATGGCAGAAATATTGATGGAACAAACATTTTGGATTACCTTGAGTACTGAAAGAAAGAAATGTCTTTCATCATTTTTCTTTACAAACATCTTAGATGGAAATATTTTTGTGGATCATTTTCAGTGTTTGGTGGGATGTAGAAGTAGGTGACAACATGATAATTGTACAAAGTGTAGGATAGGTTTGTTGTTGTTGTTAGGTACTCTTCTCTGTCCAATTGTTGTGCACTTTTGACTTGGCACAGGGATTAAAAAGTAGTAGCTATTAAATTTAAGTCATGTAAACACTGATAAATGAATGCTATTTAAAAGCAAGGTTAAAATAGACACGAAATGGTAAATTATTCGTTGATTTTATAATTGTTGGACATCCCAAAACAGTATAGTGGACAAGTAAAGATGGACGGAGGGAGTATTAAACGGTTTTAACAATGCCTAGGTGTTGATTGAGACAAATGAAATTAGATCAGTTGAGAAATTTGTTAAGAGAGTGTTTTTCACCCATAAGAGTGAGGAAATATTTTCCTAATTGTGGTGGAAGACATCTTCCTTGAAAAAATGTTTTTGAGGGTAACATTCTCCCATTGTATCAGATATAATTGATTTACAAATATCTCAATTCTTACAACATATGAATACTTCAATCAACACATTATCAACCTTTAACTCAAAATGCTAAATGCTATCCCACTGACCTGAAATTTTTATGATTCATGCCAAAAAAACAACTGAAGAATGTGTTTCTTTTAATTTCTGTTTCTAATTACTTTGGAGCTTGCACCTTAATTGTTTTCTGTTAGTTTAGTGAGGCTCTCTAATTTCTGGTTATGATACTTTTTCATTTTCATGAAAAAAAATATTATTTTACAGGCTCAAGTACATAGACATTCTCATAACTTTAGAGAAGTACAGCAGTGCACTTTGCTGTCTATTAAGACAGGGGGATGCAGTGAAGATTGTTCGTATTGTCCTCAATCGTCTAGGTACAACACAGGACTGAAAGCACAGAAACTTATGAATAAGGATGCAGTCTTGGAAGCAGCAAGAAAG</genome_strand>
        <mrna_strand>AAGCAAATAGCAATTGAAAGCTGCTCTGTTTTGCTTCACCTATCTGCTTCTGCAAATCCGGCCATTTCTGTGTATATATATAGATAGAAGGTGAAAAGGATGATGTGGGTTCGATCGATTCGGCGGCCATTATCGTCGTTGGTTCTACTTCAGTCGCGTGCCCCGAATTATTCCTCATTGTCAGCTTCAGCAGCTGCAGTAGAAGCGGAACGATGTATAAAGGAAGGACCCAGAAATAACTGGACTAGAGATGAAATCAAGTCTATTTACGATTCACCACTCCTCGATCTCCTCTTTCATGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGTACATAGACATTCTCATAACTTTAGAGAAGTACAGCAGTGCACTTTGCTGTCTATTAAGACAGGGGGATGCAGTGAAGATTGTTCGTATTGTCCTCAATCGTCTAGGTACAACACAGGACTGAAAGCACAGAAACTTATGAATAAGGATGCAGTCCTGGAAGCAGCAAGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E315022" ref_strand="+" ref_description="SGN-E315022 [cTOB-4-G6]">
      <seq>caaatagcaattgaaagctgctctgttttgcttcacctatctgcttctgcaaatccggccatttctgtgtatatatatagatagaaggtgaaaaggatgatgtgggttcgatcgattcggcggccattatcgtcgttggttctacttcagtcgcgtgccccgaattattcctcattgtcagcttcagcagctgcagtagaagcggaacgatgtataaaggaaggacccagaaataactggactagagatgaaatcaagtctatttacgattcaccactcctcgatctcctctttcatggcgctcaagtacatagacattctcataactttagagaagtacagcagtgcactttgctgtctattaagacagggggatgcagtgaagattgttcgtattgtcctcaatcgtctaggtacaacacaggactgaaagcacagaaacttatgaataaggatgcagtcttggaagcagcacgaaaggcgaaagagggaggtagcactcgtttttgtatgggtgctgcatggagggatacaataggaaggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="47706" stop="50333"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48006" g_stop="48305" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="300" r_length="300" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48306" i_stop="49413" i_length="1108">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49414" g_stop="49593" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="480" r_length="180" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49594" i_stop="49967" i_length="374">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49968" g_stop="50033" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="481" r_stop="546" r_length="66" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E315022" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E315022" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48006" e_stop="48305"/>
          <exon e_start="49414" e_stop="49593"/>
          <exon e_start="49968" e_stop="50033"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAATAGCAATTGAAAGCTGCTCTGTTTTGCTTCACCTATCTGCTTCTGCAAATCCGGCCATTTCTGTGTATATATATAGATAGAAGGTGAAAAGGATGATGTGGGTTCGATCGATTCGGCGGCCATTATCGTCGTTGGTTCTACTTCAGTCGCGTGCCCCGAATTATTCCTCATTGTCAGCTTCAGCAGCTGCAGTAGAAGCGGAACGATGTATAAAGGAAGGACCCAGAAATAACTGGACTAGAGATGAAATCAAGTCTATTTACGATTCACCACTCCTCGATCTCCTCTTTCATGGCGTCCGTATTCTCTTCTCTCTCCTTTTGTTTTTAATTTAATTATGTTTGATTTTGAATCATTTGGGTCACTGCATTGGTTCTATTTTGTGAAGCTTTGTCTATAGTTAATTGGCTTTACTATACATCAATCACAAAAATAGTATTTTTTTAAATCTATGGGGGGTTTTGTTCTGAGGTTTAGCAAGGGTGTTTTTGGTTTGATTTTCTGTTACTGTGCTTATGTGCAGTTGATTTTTTGTATGGCAGAAATATTGATGGAACAAACATTTTGGATTACCTTGAGTACTGAAAGAAAGAAATGTCTTTCATCATTTTTCTTTACAAACATCTTAGATGGAAATATTTTTGTGGATCATTTTCAGTGTTTGGTGGGATGTAGAAGTAGGTGACAACATGATAATTGTACAAAGTGTAGGATAGGTTTGTTGTTGTTGTTAGGTACTCTTCTCTGTCCAATTGTTGTGCACTTTTGACTTGGCACAGGGATTAAAAAGTAGTAGCTATTAAATTTAAGTCATGTAAACACTGATAAATGAATGCTATTTAAAAGCAAGGTTAAAATAGACACGAAATGGTAAATTATTCGTTGATTTTATAATTGTTGGACATCCCAAAACAGTATAGTGGACAAGTAAAGATGGACGGAGGGAGTATTAAACGGTTTTAACAATGCCTAGGTGTTGATTGAGACAAATGAAATTAGATCAGTTGAGAAATTTGTTAAGAGAGTGTTTTTCACCCATAAGAGTGAGGAAATATTTTCCTAATTGTGGTGGAAGACATCTTCCTTGAAAAAATGTTTTTGAGGGTAACATTCTCCCATTGTATCAGATATAATTGATTTACAAATATCTCAATTCTTACAACATATGAATACTTCAATCAACACATTATCAACCTTTAACTCAAAATGCTAAATGCTATCCCACTGACCTGAAATTTTTATGATTCATGCCAAAAAAACAACTGAAGAATGTGTTTCTTTTAATTTCTGTTTCTAATTACTTTGGAGCTTGCACCTTAATTGTTTTCTGTTAGTTTAGTGAGGCTCTCTAATTTCTGGTTATGATACTTTTTCATTTTCATGAAAAAAAATATTATTTTACAGGCTCAAGTACATAGACATTCTCATAACTTTAGAGAAGTACAGCAGTGCACTTTGCTGTCTATTAAGACAGGGGGATGCAGTGAAGATTGTTCGTATTGTCCTCAATCGTCTAGGTACAACACAGGACTGAAAGCACAGAAACTTATGAATAAGGATGCAGTCTTGGAAGCAGCAAGAAAGGTGCTCTCTTTCTGTTTCTCTTGTCTGATTTTGTGAAATATTTCACCTAAGCAAAGTAGATATTCTTTAACCCTTGACTGAAACTAGGGTGACATGAGTTCTTCCCAATAGGTTCCGTTTAATCAAATGCTACACATCCCAAGTGAGTTATGTGTTCTCAAGACCTTAGAGTTACCTGGATTCTTCCCCTTTTACCATGGTGGCCAAGGATGTAATGTGATCTAGGCCAACCTGTAGATGTATAAACATGACAGATAAATGCTGTAACGGTGAATTATCCCAGTTAATTAGATTTCATTTGACTATTATACATAACATACAATGAGGTTCAATCTTGTTTGTAATGCACTTTTAGCTACTTTATGCATTGACAGGCAAAAGAGGGAGGTAGCACTCGTTTTTGTATGGGTGCTGCATGGAGGGATACAATAGGAAGGAAA</genome_strand>
        <mrna_strand>CAAATAGCAATTGAAAGCTGCTCTGTTTTGCTTCACCTATCTGCTTCTGCAAATCCGGCCATTTCTGTGTATATATATAGATAGAAGGTGAAAAGGATGATGTGGGTTCGATCGATTCGGCGGCCATTATCGTCGTTGGTTCTACTTCAGTCGCGTGCCCCGAATTATTCCTCATTGTCAGCTTCAGCAGCTGCAGTAGAAGCGGAACGATGTATAAAGGAAGGACCCAGAAATAACTGGACTAGAGATGAAATCAAGTCTATTTACGATTCACCACTCCTCGATCTCCTCTTTCATGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGTACATAGACATTCTCATAACTTTAGAGAAGTACAGCAGTGCACTTTGCTGTCTATTAAGACAGGGGGATGCAGTGAAGATTGTTCGTATTGTCCTCAATCGTCTAGGTACAACACAGGACTGAAAGCACAGAAACTTATGAATAAGGATGCAGTCTTGGAAGCAGCACGAAAG......................................................................................................................................................................................................................................................................................................................................................................................GCGAAAGAGGGAGGTAGCACTCGTTTTTGTATGGGTGCTGCATGGAGGGATACAATAGGAAGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E318942" ref_strand="+" ref_description="SGN-E318942 [cTOB-11-L24]">
      <seq>aaatagcaattgaaagctgctctgttttgcttcacctatctgcttctgcaaatccggccatttctgtgcatatatatagatagaaggtgaaaaggatgatgtgggttcgatcgattcggcggccattatcgtcgttggttctacttcagtcgcgtgccccgaattattcctcattgtcagcttcagcagctgctgtagaagcggaacgatgtataaaggaaggacccagaaataactggactagagatgaaatcaagtctatttacgattcaccactcctcgatctcctctttcatggcgctcaagtacatagacattctcataactttagagaagtacaacattgcactttgctgtctattaacacagggggatgcagtgaagattgtgcgtattgtcctcaatcgtctaggtacaacacaggactgaaagcacagaaacttatgaataaagatgcagtcttggaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="47707" stop="49882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48007" g_stop="48305" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="299" r_length="299" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48306" i_stop="49413" i_length="1108">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49414" g_stop="49582" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="468" r_length="169" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E318942" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>468</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E318942" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48007" e_stop="48305"/>
          <exon e_start="49414" e_stop="49582"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATAGCAATTGAAAGCTGCTCTGTTTTGCTTCACCTATCTGCTTCTGCAAATCCGGCCATTTCTGTGTATATATATAGATAGAAGGTGAAAAGGATGATGTGGGTTCGATCGATTCGGCGGCCATTATCGTCGTTGGTTCTACTTCAGTCGCGTGCCCCGAATTATTCCTCATTGTCAGCTTCAGCAGCTGCAGTAGAAGCGGAACGATGTATAAAGGAAGGACCCAGAAATAACTGGACTAGAGATGAAATCAAGTCTATTTACGATTCACCACTCCTCGATCTCCTCTTTCATGGCGTCCGTATTCTCTTCTCTCTCCTTTTGTTTTTAATTTAATTATGTTTGATTTTGAATCATTTGGGTCACTGCATTGGTTCTATTTTGTGAAGCTTTGTCTATAGTTAATTGGCTTTACTATACATCAATCACAAAAATAGTATTTTTTTAAATCTATGGGGGGTTTTGTTCTGAGGTTTAGCAAGGGTGTTTTTGGTTTGATTTTCTGTTACTGTGCTTATGTGCAGTTGATTTTTTGTATGGCAGAAATATTGATGGAACAAACATTTTGGATTACCTTGAGTACTGAAAGAAAGAAATGTCTTTCATCATTTTTCTTTACAAACATCTTAGATGGAAATATTTTTGTGGATCATTTTCAGTGTTTGGTGGGATGTAGAAGTAGGTGACAACATGATAATTGTACAAAGTGTAGGATAGGTTTGTTGTTGTTGTTAGGTACTCTTCTCTGTCCAATTGTTGTGCACTTTTGACTTGGCACAGGGATTAAAAAGTAGTAGCTATTAAATTTAAGTCATGTAAACACTGATAAATGAATGCTATTTAAAAGCAAGGTTAAAATAGACACGAAATGGTAAATTATTCGTTGATTTTATAATTGTTGGACATCCCAAAACAGTATAGTGGACAAGTAAAGATGGACGGAGGGAGTATTAAACGGTTTTAACAATGCCTAGGTGTTGATTGAGACAAATGAAATTAGATCAGTTGAGAAATTTGTTAAGAGAGTGTTTTTCACCCATAAGAGTGAGGAAATATTTTCCTAATTGTGGTGGAAGACATCTTCCTTGAAAAAATGTTTTTGAGGGTAACATTCTCCCATTGTATCAGATATAATTGATTTACAAATATCTCAATTCTTACAACATATGAATACTTCAATCAACACATTATCAACCTTTAACTCAAAATGCTAAATGCTATCCCACTGACCTGAAATTTTTATGATTCATGCCAAAAAAACAACTGAAGAATGTGTTTCTTTTAATTTCTGTTTCTAATTACTTTGGAGCTTGCACCTTAATTGTTTTCTGTTAGTTTAGTGAGGCTCTCTAATTTCTGGTTATGATACTTTTTCATTTTCATGAAAAAAAATATTATTTTACAGGCTCAAGTACATAGACATTCTCATAACTTTAGAGAAGTACAGCAGTGCACTTTGCTGTCTATTAAGACAGGGGGATGCAGTGAAGATTGTTCGTATTGTCCTCAATCGTCTAGGTACAACACAGGACTGAAAGCACAGAAACTTATGAATAAGGATGCAGTCTTGGAAG</genome_strand>
        <mrna_strand>AAATAGCAATTGAAAGCTGCTCTGTTTTGCTTCACCTATCTGCTTCTGCAAATCCGGCCATTTCTGTGCATATATATAGATAGAAGGTGAAAAGGATGATGTGGGTTCGATCGATTCGGCGGCCATTATCGTCGTTGGTTCTACTTCAGTCGCGTGCCCCGAATTATTCCTCATTGTCAGCTTCAGCAGCTGCTGTAGAAGCGGAACGATGTATAAAGGAAGGACCCAGAAATAACTGGACTAGAGATGAAATCAAGTCTATTTACGATTCACCACTCCTCGATCTCCTCTTTCATGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGTACATAGACATTCTCATAACTTTAGAGAAGTACAACATTGCACTTTGCTGTCTATTAACACAGGGGGATGCAGTGAAGATTGTGCGTATTGTCCTCAATCGTCTAGGTACAACACAGGACTGAAAGCACAGAAACTTATGAATAAAGATGCAGTCTTGGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E318946" ref_strand="+" ref_description="SGN-E318946 [cTOB-11-N8]">
      <seq>aaatagcaattgaaagctgctctgttttgcttcacctatctgcttctgcaaatcccgccacttctgtgtacacacacagatagaagggtgaaaaggatgatgtgggttcgatcgattcggcggccattatcgtcgttggttctaccttcagtcgcgtgcccccgaattattcctcattgtcagcttcagcagctgcagtagaagccgaacgatgtataaaggaaggaccccagaaataactggactagagatgaaatcaagtctatttaccgattcaccacctcctcgatctcctctttcatggcgctcaagtaccatagaccattctcataacctttagagaagtaccagcagtgccctttgctgtctattaagacagggggatgccagtgaagattgttcgtattgtcctcaatcgtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="47707" stop="49824"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48007" g_stop="48305" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="305" r_length="305" r_score="0.936"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48306" i_stop="49413" i_length="1108">
            <donor d_prob="0.999" d_score="0.92"/>
            <acceptor a_prob="0.995" a_score="0.83"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49414" g_stop="49524" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="421" r_length="116" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E318946" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>410</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E318946" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48007" e_stop="48305"/>
          <exon e_start="49414" e_stop="49524"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATAGCAATTGAAAGCTGCTCTGTTTTGCTTCACCTATCTGCTTCTGCAAATCCGGCCATTTCTGTGTATATATATAGATAGAAG-GTGAAAAGGATGATGTGGGTTCGATCGATTCGGCGGCCATTATCGTCGTTGGTTCTA-CTTCAGTCGCGTG-CCCCGAATTATTCCTCATTGTCAGCTTCAGCAGCTGCAGTAGAAGCGGAACGATGTATAAAGGAAGGA-CCCAGAAATAACTGGACTAGAGATGAAATCAAGTCTATTTA-CGATTCACCA-CTCCTCGATCTCCTCTTTCATGGCGTCCGTATTCTCTTCTCTCTCCTTTTGTTTTTAATTTAATTATGTTTGATTTTGAATCATTTGGGTCACTGCATTGGTTCTATTTTGTGAAGCTTTGTCTATAGTTAATTGGCTTTACTATACATCAATCACAAAAATAGTATTTTTTTAAATCTATGGGGGGTTTTGTTCTGAGGTTTAGCAAGGGTGTTTTTGGTTTGATTTTCTGTTACTGTGCTTATGTGCAGTTGATTTTTTGTATGGCAGAAATATTGATGGAACAAACATTTTGGATTACCTTGAGTACTGAAAGAAAGAAATGTCTTTCATCATTTTTCTTTACAAACATCTTAGATGGAAATATTTTTGTGGATCATTTTCAGTGTTTGGTGGGATGTAGAAGTAGGTGACAACATGATAATTGTACAAAGTGTAGGATAGGTTTGTTGTTGTTGTTAGGTACTCTTCTCTGTCCAATTGTTGTGCACTTTTGACTTGGCACAGGGATTAAAAAGTAGTAGCTATTAAATTTAAGTCATGTAAACACTGATAAATGAATGCTATTTAAAAGCAAGGTTAAAATAGACACGAAATGGTAAATTATTCGTTGATTTTATAATTGTTGGACATCCCAAAACAGTATAGTGGACAAGTAAAGATGGACGGAGGGAGTATTAAACGGTTTTAACAATGCCTAGGTGTTGATTGAGACAAATGAAATTAGATCAGTTGAGAAATTTGTTAAGAGAGTGTTTTTCACCCATAAGAGTGAGGAAATATTTTCCTAATTGTGGTGGAAGACATCTTCCTTGAAAAAATGTTTTTGAGGGTAACATTCTCCCATTGTATCAGATATAATTGATTTACAAATATCTCAATTCTTACAACATATGAATACTTCAATCAACACATTATCAACCTTTAACTCAAAATGCTAAATGCTATCCCACTGACCTGAAATTTTTATGATTCATGCCAAAAAAACAACTGAAGAATGTGTTTCTTTTAATTTCTGTTTCTAATTACTTTGGAGCTTGCACCTTAATTGTTTTCTGTTAGTTTAGTGAGGCTCTCTAATTTCTGGTTATGATACTTTTTCATTTTCATGAAAAAAAATATTATTTTACAGGCTCAAGTA-CATAGA-CATTCTCATAA-CTTTAGAGAAGTA-CAGCAGTGCACTTTGCTGTCTATTAAGACAGGGGGATG-CAGTGAAGATTGTTCGTATTGTCCTCAATCGTCT</genome_strand>
        <mrna_strand>AAATAGCAATTGAAAGCTGCTCTGTTTTGCTTCACCTATCTGCTTCTGCAAATCCCGCCACTTCTGTGTACACACACAGATAGAAGGGTGAAAAGGATGATGTGGGTTCGATCGATTCGGCGGCCATTATCGTCGTTGGTTCTACCTTCAGTCGCGTGCCCCCGAATTATTCCTCATTGTCAGCTTCAGCAGCTGCAGTAGAAGCCGAACGATGTATAAAGGAAGGACCCCAGAAATAACTGGACTAGAGATGAAATCAAGTCTATTTACCGATTCACCACCTCCTCGATCTCCTCTTTCATGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGTACCATAGACCATTCTCATAACCTTTAGAGAAGTACCAGCAGTGCCCTTTGCTGTCTATTAAGACAGGGGGATGCCAGTGAAGATTGTTCGTATTGTCCTCAATCGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E205007" ref_strand="+" ref_description="SGN-E205007 [cLEC-16-D7]">
      <seq>atgatgtgggttcgatcgattcggcggccattatcgtcgttggttctacttcagtcgcgtgccccgaattattcctcattgtcagcttcagcagctgcagtagaagcggaacgatgtataaaggaaggacccagaaataactggactagagatgaaatcaagtctatttacgattcaccactcctcgatctcctctttcatggcgctcaagtacatagacattctcataactttagagaagtacagcagtgcactttgctgtctattaagacagggggatgcagtgaagattgttcgtattgtcctcaatcgtctaggtacaacacaggactgaaagcacagaaacttatgaataaggatgcagtcttggaagcagcaagaaaggcaaaagagggaggtagcactcgtttttgtatgggtgctgcatggagggatacaataggaaggaaaaccaatatgaaccagatcgtcgagtatgtgaaggaaataagggacatgggaatggaggtttgctgcaccttgggaatgcttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="47802" stop="51647"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48102" g_stop="48305" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="204" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48306" i_stop="49413" i_length="1108">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49414" g_stop="49593" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="384" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49594" i_stop="49967" i_length="374">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49968" g_stop="50074" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="385" r_stop="491" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50075" i_stop="51305" i_length="1231">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51306" g_stop="51347" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="533" r_length="42" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E205007" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>533</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E205007" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48102" e_stop="48305"/>
          <exon e_start="49414" e_stop="49593"/>
          <exon e_start="49968" e_stop="50074"/>
          <exon e_start="51306" e_stop="51347"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGATGTGGGTTCGATCGATTCGGCGGCCATTATCGTCGTTGGTTCTACTTCAGTCGCGTGCCCCGAATTATTCCTCATTGTCAGCTTCAGCAGCTGCAGTAGAAGCGGAACGATGTATAAAGGAAGGACCCAGAAATAACTGGACTAGAGATGAAATCAAGTCTATTTACGATTCACCACTCCTCGATCTCCTCTTTCATGGCGTCCGTATTCTCTTCTCTCTCCTTTTGTTTTTAATTTAATTATGTTTGATTTTGAATCATTTGGGTCACTGCATTGGTTCTATTTTGTGAAGCTTTGTCTATAGTTAATTGGCTTTACTATACATCAATCACAAAAATAGTATTTTTTTAAATCTATGGGGGGTTTTGTTCTGAGGTTTAGCAAGGGTGTTTTTGGTTTGATTTTCTGTTACTGTGCTTATGTGCAGTTGATTTTTTGTATGGCAGAAATATTGATGGAACAAACATTTTGGATTACCTTGAGTACTGAAAGAAAGAAATGTCTTTCATCATTTTTCTTTACAAACATCTTAGATGGAAATATTTTTGTGGATCATTTTCAGTGTTTGGTGGGATGTAGAAGTAGGTGACAACATGATAATTGTACAAAGTGTAGGATAGGTTTGTTGTTGTTGTTAGGTACTCTTCTCTGTCCAATTGTTGTGCACTTTTGACTTGGCACAGGGATTAAAAAGTAGTAGCTATTAAATTTAAGTCATGTAAACACTGATAAATGAATGCTATTTAAAAGCAAGGTTAAAATAGACACGAAATGGTAAATTATTCGTTGATTTTATAATTGTTGGACATCCCAAAACAGTATAGTGGACAAGTAAAGATGGACGGAGGGAGTATTAAACGGTTTTAACAATGCCTAGGTGTTGATTGAGACAAATGAAATTAGATCAGTTGAGAAATTTGTTAAGAGAGTGTTTTTCACCCATAAGAGTGAGGAAATATTTTCCTAATTGTGGTGGAAGACATCTTCCTTGAAAAAATGTTTTTGAGGGTAACATTCTCCCATTGTATCAGATATAATTGATTTACAAATATCTCAATTCTTACAACATATGAATACTTCAATCAACACATTATCAACCTTTAACTCAAAATGCTAAATGCTATCCCACTGACCTGAAATTTTTATGATTCATGCCAAAAAAACAACTGAAGAATGTGTTTCTTTTAATTTCTGTTTCTAATTACTTTGGAGCTTGCACCTTAATTGTTTTCTGTTAGTTTAGTGAGGCTCTCTAATTTCTGGTTATGATACTTTTTCATTTTCATGAAAAAAAATATTATTTTACAGGCTCAAGTACATAGACATTCTCATAACTTTAGAGAAGTACAGCAGTGCACTTTGCTGTCTATTAAGACAGGGGGATGCAGTGAAGATTGTTCGTATTGTCCTCAATCGTCTAGGTACAACACAGGACTGAAAGCACAGAAACTTATGAATAAGGATGCAGTCTTGGAAGCAGCAAGAAAGGTGCTCTCTTTCTGTTTCTCTTGTCTGATTTTGTGAAATATTTCACCTAAGCAAAGTAGATATTCTTTAACCCTTGACTGAAACTAGGGTGACATGAGTTCTTCCCAATAGGTTCCGTTTAATCAAATGCTACACATCCCAAGTGAGTTATGTGTTCTCAAGACCTTAGAGTTACCTGGATTCTTCCCCTTTTACCATGGTGGCCAAGGATGTAATGTGATCTAGGCCAACCTGTAGATGTATAAACATGACAGATAAATGCTGTAACGGTGAATTATCCCAGTTAATTAGATTTCATTTGACTATTATACATAACATACAATGAGGTTCAATCTTGTTTGTAATGCACTTTTAGCTACTTTATGCATTGACAGGCAAAAGAGGGAGGTAGCACTCGTTTTTGTATGGGTGCTGCATGGAGGGATACAATAGGAAGGAAAACCAATATGAACCAGATCGTCGAGTATGTGAAGGAAATAAGGTAATGAGCTATAGTTATATTTTTCATTCCAGTGCCTTGGATGATCTCTTCTGATCTTTTTGTTTTCTTTTTCTGATTATGTTTATTTTATTGGTTATGGGAACCTCATGTATACAAGCAGTATAGAATTTTTAAAGCCAATCGATTGCTGTATATGGTGTTATGAACCACTAGAATGTGTTGGGCAAAGGAAAATGCCTGTTTCTGCCTTTTATTGTGGGGGTTGGGTAAAGATTACCATGGTTCATCTTAAAATGTCTAAGCTGTGGGAGGCAATATCTAACAGATTTACGTTTAGGACAGAAGGATATGGTGCTAAATTTTCTTGTAAAAGACACCTGTTTCATGAACTTCAATATCTACTGATACCAACCATTCGCAGATACCATCCTTATTTTCAAACTGTGAGATGTTTCTGGCATTCTGAAATCTCCTTCAGTTTCTGTTTGACAAATAAGCGGAGCTAGTACCTTGCCACAATTTGATTTACCTAGTAATGGTCAAAAGACTTAATGACTAAGCATTAGGAGTCAAAAGTTATATAGGAAAAGAAACAACTCTCTCTATTTACCTTCAATCATGAGGTGAACACTAATTTGAGAAACATATGAGTTAACTCATAAAAGAGACAAGAATCTAGAAACAATAGGCCTCTTGATATTTTGTTAGTTTAAACTAATTCGAATATATCAAGTATCAGACAACTGTAGGCTGGTTAGATGCTGAGGACAGTATTGCAGGGCCTTGTTGTCTATTTTGTTATTTCCTTGTAGCTTTGAAGTTTAAAGAGTGAGGAAACTGGAGTTACGATGATCTCTGAAATTGAGAAGCATTTCTTCTGCTTCGTAGAATGACTACAGAAGCAAGCAGGATTAGGTTTACTAATTAATTGGTTAAACATTAGACCATCTGTTACCCATTCTAAAAGCTTTCTTCCTCGCAAGAAACTTTCATGAGTAGTTCTGTGATTGTGCAACTTCTAATCAAAAACACCACATTTTCTTCTTAGTCCTTGTTTGTGGGTTGTGGCAATAACGCATACCCAAATATTGTTTATTGAAGTTAAACAAAAAATAACAGAAAAACTATAGACTATCAATTGCCATCATGTTTACATGTAATGCACAAACAAGTTGAAAATGTTTCACTATGACATGACAACAACTGAGGCATCCATTGATTTTGTTCTGCCCAATTATTTAATGTTGTGCAAATTATTCTCAATATGAAGGGACATGGGAATGGAGGTTTGCTGCACCTTGGGAATGCTTGA</genome_strand>
        <mrna_strand>ATGATGTGGGTTCGATCGATTCGGCGGCCATTATCGTCGTTGGTTCTACTTCAGTCGCGTGCCCCGAATTATTCCTCATTGTCAGCTTCAGCAGCTGCAGTAGAAGCGGAACGATGTATAAAGGAAGGACCCAGAAATAACTGGACTAGAGATGAAATCAAGTCTATTTACGATTCACCACTCCTCGATCTCCTCTTTCATGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGTACATAGACATTCTCATAACTTTAGAGAAGTACAGCAGTGCACTTTGCTGTCTATTAAGACAGGGGGATGCAGTGAAGATTGTTCGTATTGTCCTCAATCGTCTAGGTACAACACAGGACTGAAAGCACAGAAACTTATGAATAAGGATGCAGTCTTGGAAGCAGCAAGAAAG......................................................................................................................................................................................................................................................................................................................................................................................GCAAAAGAGGGAGGTAGCACTCGTTTTTGTATGGGTGCTGCATGGAGGGATACAATAGGAAGGAAAACCAATATGAACCAGATCGTCGAGTATGTGAAGGAAATAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACATGGGAATGGAGGTTTGCTGCACCTTGGGAATGCTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E205006" ref_strand="+" ref_description="SGN-E205006 [cLEC-16-D5]">
      <seq>atgatgtgggttcgatcgattcggcggccattatcgtcgttgggtctacttcagtcgcgtgccccgaattattcctcattgtcagcttcagcagctgcagtagaagcggaacgatgtataaaggaaggacccagaaataactggactagagatgaaatcaagtctatttacgattcaccactcctcgatctcctctttcatggcgctcaagtacatagacattctcataactttagagaagtacagcagtgcactttgctgtctattaagacagggggatgcagtgaagattgttcgtattgtcctcaatcgtctaggtacaacacaggactgaaagcacagaaacttatgaataaggatgcagtcttggaagcagcaagaaaggcaaaagagggaggtagcactcgtttttgtatgggtgctgcatggagggatacaataggaaggaaaaccaatatgaaccagatcgtcgagtatgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="47802" stop="50363"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48102" g_stop="48305" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="204" r_length="204" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48306" i_stop="49413" i_length="1108">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49414" g_stop="49593" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="384" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49594" i_stop="49967" i_length="374">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49968" g_stop="50063" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="385" r_stop="480" r_length="96" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E205006" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E205006" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48102" e_stop="48305"/>
          <exon e_start="49414" e_stop="49593"/>
          <exon e_start="49968" e_stop="50063"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGATGTGGGTTCGATCGATTCGGCGGCCATTATCGTCGTTGGTTCTACTTCAGTCGCGTGCCCCGAATTATTCCTCATTGTCAGCTTCAGCAGCTGCAGTAGAAGCGGAACGATGTATAAAGGAAGGACCCAGAAATAACTGGACTAGAGATGAAATCAAGTCTATTTACGATTCACCACTCCTCGATCTCCTCTTTCATGGCGTCCGTATTCTCTTCTCTCTCCTTTTGTTTTTAATTTAATTATGTTTGATTTTGAATCATTTGGGTCACTGCATTGGTTCTATTTTGTGAAGCTTTGTCTATAGTTAATTGGCTTTACTATACATCAATCACAAAAATAGTATTTTTTTAAATCTATGGGGGGTTTTGTTCTGAGGTTTAGCAAGGGTGTTTTTGGTTTGATTTTCTGTTACTGTGCTTATGTGCAGTTGATTTTTTGTATGGCAGAAATATTGATGGAACAAACATTTTGGATTACCTTGAGTACTGAAAGAAAGAAATGTCTTTCATCATTTTTCTTTACAAACATCTTAGATGGAAATATTTTTGTGGATCATTTTCAGTGTTTGGTGGGATGTAGAAGTAGGTGACAACATGATAATTGTACAAAGTGTAGGATAGGTTTGTTGTTGTTGTTAGGTACTCTTCTCTGTCCAATTGTTGTGCACTTTTGACTTGGCACAGGGATTAAAAAGTAGTAGCTATTAAATTTAAGTCATGTAAACACTGATAAATGAATGCTATTTAAAAGCAAGGTTAAAATAGACACGAAATGGTAAATTATTCGTTGATTTTATAATTGTTGGACATCCCAAAACAGTATAGTGGACAAGTAAAGATGGACGGAGGGAGTATTAAACGGTTTTAACAATGCCTAGGTGTTGATTGAGACAAATGAAATTAGATCAGTTGAGAAATTTGTTAAGAGAGTGTTTTTCACCCATAAGAGTGAGGAAATATTTTCCTAATTGTGGTGGAAGACATCTTCCTTGAAAAAATGTTTTTGAGGGTAACATTCTCCCATTGTATCAGATATAATTGATTTACAAATATCTCAATTCTTACAACATATGAATACTTCAATCAACACATTATCAACCTTTAACTCAAAATGCTAAATGCTATCCCACTGACCTGAAATTTTTATGATTCATGCCAAAAAAACAACTGAAGAATGTGTTTCTTTTAATTTCTGTTTCTAATTACTTTGGAGCTTGCACCTTAATTGTTTTCTGTTAGTTTAGTGAGGCTCTCTAATTTCTGGTTATGATACTTTTTCATTTTCATGAAAAAAAATATTATTTTACAGGCTCAAGTACATAGACATTCTCATAACTTTAGAGAAGTACAGCAGTGCACTTTGCTGTCTATTAAGACAGGGGGATGCAGTGAAGATTGTTCGTATTGTCCTCAATCGTCTAGGTACAACACAGGACTGAAAGCACAGAAACTTATGAATAAGGATGCAGTCTTGGAAGCAGCAAGAAAGGTGCTCTCTTTCTGTTTCTCTTGTCTGATTTTGTGAAATATTTCACCTAAGCAAAGTAGATATTCTTTAACCCTTGACTGAAACTAGGGTGACATGAGTTCTTCCCAATAGGTTCCGTTTAATCAAATGCTACACATCCCAAGTGAGTTATGTGTTCTCAAGACCTTAGAGTTACCTGGATTCTTCCCCTTTTACCATGGTGGCCAAGGATGTAATGTGATCTAGGCCAACCTGTAGATGTATAAACATGACAGATAAATGCTGTAACGGTGAATTATCCCAGTTAATTAGATTTCATTTGACTATTATACATAACATACAATGAGGTTCAATCTTGTTTGTAATGCACTTTTAGCTACTTTATGCATTGACAGGCAAAAGAGGGAGGTAGCACTCGTTTTTGTATGGGTGCTGCATGGAGGGATACAATAGGAAGGAAAACCAATATGAACCAGATCGTCGAGTATGTG</genome_strand>
        <mrna_strand>ATGATGTGGGTTCGATCGATTCGGCGGCCATTATCGTCGTTGGGTCTACTTCAGTCGCGTGCCCCGAATTATTCCTCATTGTCAGCTTCAGCAGCTGCAGTAGAAGCGGAACGATGTATAAAGGAAGGACCCAGAAATAACTGGACTAGAGATGAAATCAAGTCTATTTACGATTCACCACTCCTCGATCTCCTCTTTCATGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGTACATAGACATTCTCATAACTTTAGAGAAGTACAGCAGTGCACTTTGCTGTCTATTAAGACAGGGGGATGCAGTGAAGATTGTTCGTATTGTCCTCAATCGTCTAGGTACAACACAGGACTGAAAGCACAGAAACTTATGAATAAGGATGCAGTCTTGGAAGCAGCAAGAAAG......................................................................................................................................................................................................................................................................................................................................................................................GCAAAAGAGGGAGGTAGCACTCGTTTTTGTATGGGTGCTGCATGGAGGGATACAATAGGAAGGAAAACCAATATGAACCAGATCGTCGAGTATGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E284250" ref_strand="+" ref_description="SGN-E284250 [cLER-16-B3]">
      <seq>tgcactttgctgtctattaagacagggggatgcagtgaagattgttcgtattgtcctcaatcgtctaggtacaacacaggactgaaagcacagaaacttatgaataaggatgcagtcttggaagcagcaagaaaggcaaaagagggaggtagcactcgtttttgtatgggtgctgcatggagggatacaataggaaggaaaaccaatatgaaccagatcgtcgagtatgtgaaggaaataagggacatgggaatggaggtttgctgcaccttgggaatgcttgagaagcagcaagctttagagctcaagaaagctggtctaacagcatacaatcacaatcttgacacctcaagagaatactatcctaatattataaccactagaacttatgatgagcggctggaaactcttaagcatgtacgcgaagcaggaattaatgtgtgttcaggtggaataatagggctcggtgaggctgaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="49159" stop="52435"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49459" g_stop="49593" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="135" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49594" i_stop="49967" i_length="374">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49968" g_stop="50074" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="242" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50075" i_stop="51305" i_length="1231">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="51306" g_stop="51511" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="448" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51512" i_stop="52105" i_length="594">
            <donor d_prob="0.739" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="52106" g_stop="52135" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="478" r_length="30" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E284250" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E284250" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49459" e_stop="49593"/>
          <exon e_start="49968" e_stop="50074"/>
          <exon e_start="51306" e_stop="51511"/>
          <exon e_start="52106" e_stop="52135"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCACTTTGCTGTCTATTAAGACAGGGGGATGCAGTGAAGATTGTTCGTATTGTCCTCAATCGTCTAGGTACAACACAGGACTGAAAGCACAGAAACTTATGAATAAGGATGCAGTCTTGGAAGCAGCAAGAAAGGTGCTCTCTTTCTGTTTCTCTTGTCTGATTTTGTGAAATATTTCACCTAAGCAAAGTAGATATTCTTTAACCCTTGACTGAAACTAGGGTGACATGAGTTCTTCCCAATAGGTTCCGTTTAATCAAATGCTACACATCCCAAGTGAGTTATGTGTTCTCAAGACCTTAGAGTTACCTGGATTCTTCCCCTTTTACCATGGTGGCCAAGGATGTAATGTGATCTAGGCCAACCTGTAGATGTATAAACATGACAGATAAATGCTGTAACGGTGAATTATCCCAGTTAATTAGATTTCATTTGACTATTATACATAACATACAATGAGGTTCAATCTTGTTTGTAATGCACTTTTAGCTACTTTATGCATTGACAGGCAAAAGAGGGAGGTAGCACTCGTTTTTGTATGGGTGCTGCATGGAGGGATACAATAGGAAGGAAAACCAATATGAACCAGATCGTCGAGTATGTGAAGGAAATAAGGTAATGAGCTATAGTTATATTTTTCATTCCAGTGCCTTGGATGATCTCTTCTGATCTTTTTGTTTTCTTTTTCTGATTATGTTTATTTTATTGGTTATGGGAACCTCATGTATACAAGCAGTATAGAATTTTTAAAGCCAATCGATTGCTGTATATGGTGTTATGAACCACTAGAATGTGTTGGGCAAAGGAAAATGCCTGTTTCTGCCTTTTATTGTGGGGGTTGGGTAAAGATTACCATGGTTCATCTTAAAATGTCTAAGCTGTGGGAGGCAATATCTAACAGATTTACGTTTAGGACAGAAGGATATGGTGCTAAATTTTCTTGTAAAAGACACCTGTTTCATGAACTTCAATATCTACTGATACCAACCATTCGCAGATACCATCCTTATTTTCAAACTGTGAGATGTTTCTGGCATTCTGAAATCTCCTTCAGTTTCTGTTTGACAAATAAGCGGAGCTAGTACCTTGCCACAATTTGATTTACCTAGTAATGGTCAAAAGACTTAATGACTAAGCATTAGGAGTCAAAAGTTATATAGGAAAAGAAACAACTCTCTCTATTTACCTTCAATCATGAGGTGAACACTAATTTGAGAAACATATGAGTTAACTCATAAAAGAGACAAGAATCTAGAAACAATAGGCCTCTTGATATTTTGTTAGTTTAAACTAATTCGAATATATCAAGTATCAGACAACTGTAGGCTGGTTAGATGCTGAGGACAGTATTGCAGGGCCTTGTTGTCTATTTTGTTATTTCCTTGTAGCTTTGAAGTTTAAAGAGTGAGGAAACTGGAGTTACGATGATCTCTGAAATTGAGAAGCATTTCTTCTGCTTCGTAGAATGACTACAGAAGCAAGCAGGATTAGGTTTACTAATTAATTGGTTAAACATTAGACCATCTGTTACCCATTCTAAAAGCTTTCTTCCTCGCAAGAAACTTTCATGAGTAGTTCTGTGATTGTGCAACTTCTAATCAAAAACACCACATTTTCTTCTTAGTCCTTGTTTGTGGGTTGTGGCAATAACGCATACCCAAATATTGTTTATTGAAGTTAAACAAAAAATAACAGAAAAACTATAGACTATCAATTGCCATCATGTTTACATGTAATGCACAAACAAGTTGAAAATGTTTCACTATGACATGACAACAACTGAGGCATCCATTGATTTTGTTCTGCCCAATTATTTAATGTTGTGCAAATTATTCTCAATATGAAGGGACATGGGAATGGAGGTTTGCTGCACCTTGGGAATGCTTGAGAAGCAGCAAGCTTTAGAGCTCAAGAAAGCTGGTCTAACAGCATACAATCACAATCTTGACACCTCAAGAGAATACTATCCTAATATTATAACCACTAGAACTTATGATGAGCGGCTGGAAACTCTTAAGCATGTACGCGAAGCAGGAATTAATGTGTGTTCAGGTATTCGTTGAAGTATAAAATAATGTTGTGTTTATATATTGACACTTGTGACTCATTGGAATAACAAATTAACAATATGTAGAACCATCAATCTAGACTCTATATTTGATGCATGCATGTTCATGTATATGCAAATACTGAAGTATCACATTATTGGGTGTATACCACCACATATAGTGAGTTGAAACGATTTGATTATAAGTGCAATGTCATTGGCAGCTAAGATCTTTTGAGCAGCCTTAAAGCCTCTTGATGAGAACATAAAACTGATTTTCTTTAGGACATGAAAGTGAACCCTACTTCAAGTATTTTGACATGAGTTCTAATTTCTAAATTGTTAGTAAAAGGTCTTTCAGACCTTTCAATTTGAACTTCTTACTGTTTTTCTTCTTTATGACTTCCTGTTCATAGATAGACGAATCATTAATAATTGTTGGTAGGGTATTCTTAATTGTTATTTTATTATTGGAAGTTAAGGGAATGATTGAAAAATAGTCAGTTGTGTTTGTTTTGACATAGGTTGTGTAGTAAAAAATCTTCATGATGTGCCAATCCTCATCAAAATCTTGCTAACCTCTTATTTTCTTCGATCAGGTGGAATAATAGGGCTCGGTGAGGCTGAAG</genome_strand>
        <mrna_strand>TGCACTTTGCTGTCTATTAAGACAGGGGGATGCAGTGAAGATTGTTCGTATTGTCCTCAATCGTCTAGGTACAACACAGGACTGAAAGCACAGAAACTTATGAATAAGGATGCAGTCTTGGAAGCAGCAAGAAAG......................................................................................................................................................................................................................................................................................................................................................................................GCAAAAGAGGGAGGTAGCACTCGTTTTTGTATGGGTGCTGCATGGAGGGATACAATAGGAAGGAAAACCAATATGAACCAGATCGTCGAGTATGTGAAGGAAATAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACATGGGAATGGAGGTTTGCTGCACCTTGGGAATGCTTGAGAAGCAGCAAGCTTTAGAGCTCAAGAAAGCTGGTCTAACAGCATACAATCACAATCTTGACACCTCAAGAGAATACTATCCTAATATTATAACCACTAGAACTTATGATGAGCGGCTGGAAACTCTTAAGCATGTACGCGAAGCAGGAATTAATGTGTGTTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATAATAGGGCTCGGTGAGGCTGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E251295" ref_strand="+" ref_description="SGN-E251295 [cLEG-10-D22]">
      <seq>gggatacaataggaaggaaaaccaatatgaaccagatcgtcgagtatgtgaaggaaataagggacatgggaatggaggtttgctgcaccttgggaatgcttgagaagcagcaagctttagagctcaagaaagctggtctaacagcatacaatcacaatcttgacacctcaagagaatactatcctaatattataaccactagaacttatgatgagcggctggaaactcttaagcatgtacgcgaagcaggaattaatgtgtgttcaggtggaataatagggctcggtgaggctgaagaggatagaattggtttgttgcataccctgtcaactcttccaactcaccctgagagtgtgccgattaatgcacttattgcagtaaaaggtacaccattggaagaccagaagccagtggacatatgggatatgattaggatgatttcgacagcaagaataacaatgccaggtgcaatggttaggctttctgcaggaagagttcgtttttctgtccccgagcaggctctttgtttccttgctggtgccaattccatctttacaggtgagaagttgttgactacaccaaataatgactatgatgctgatcagaatatgttcaaattac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="49714" stop="53389"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50014" g_stop="50074" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50075" i_stop="51305" i_length="1231">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51306" g_stop="51511" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="267" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51512" i_stop="52105" i_length="594">
            <donor d_prob="0.739" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52106" g_stop="52245" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="407" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52246" i_stop="52875" i_length="630">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="52876" g_stop="53089" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="621" r_length="214" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E251295" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>621</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E251295" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50014" e_stop="50074"/>
          <exon e_start="51306" e_stop="51511"/>
          <exon e_start="52106" e_stop="52245"/>
          <exon e_start="52876" e_stop="53089"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGATACAATAGGAAGGAAAACCAATATGAACCAGATCGTCGAGTATGTGAAGGAAATAAGGTAATGAGCTATAGTTATATTTTTCATTCCAGTGCCTTGGATGATCTCTTCTGATCTTTTTGTTTTCTTTTTCTGATTATGTTTATTTTATTGGTTATGGGAACCTCATGTATACAAGCAGTATAGAATTTTTAAAGCCAATCGATTGCTGTATATGGTGTTATGAACCACTAGAATGTGTTGGGCAAAGGAAAATGCCTGTTTCTGCCTTTTATTGTGGGGGTTGGGTAAAGATTACCATGGTTCATCTTAAAATGTCTAAGCTGTGGGAGGCAATATCTAACAGATTTACGTTTAGGACAGAAGGATATGGTGCTAAATTTTCTTGTAAAAGACACCTGTTTCATGAACTTCAATATCTACTGATACCAACCATTCGCAGATACCATCCTTATTTTCAAACTGTGAGATGTTTCTGGCATTCTGAAATCTCCTTCAGTTTCTGTTTGACAAATAAGCGGAGCTAGTACCTTGCCACAATTTGATTTACCTAGTAATGGTCAAAAGACTTAATGACTAAGCATTAGGAGTCAAAAGTTATATAGGAAAAGAAACAACTCTCTCTATTTACCTTCAATCATGAGGTGAACACTAATTTGAGAAACATATGAGTTAACTCATAAAAGAGACAAGAATCTAGAAACAATAGGCCTCTTGATATTTTGTTAGTTTAAACTAATTCGAATATATCAAGTATCAGACAACTGTAGGCTGGTTAGATGCTGAGGACAGTATTGCAGGGCCTTGTTGTCTATTTTGTTATTTCCTTGTAGCTTTGAAGTTTAAAGAGTGAGGAAACTGGAGTTACGATGATCTCTGAAATTGAGAAGCATTTCTTCTGCTTCGTAGAATGACTACAGAAGCAAGCAGGATTAGGTTTACTAATTAATTGGTTAAACATTAGACCATCTGTTACCCATTCTAAAAGCTTTCTTCCTCGCAAGAAACTTTCATGAGTAGTTCTGTGATTGTGCAACTTCTAATCAAAAACACCACATTTTCTTCTTAGTCCTTGTTTGTGGGTTGTGGCAATAACGCATACCCAAATATTGTTTATTGAAGTTAAACAAAAAATAACAGAAAAACTATAGACTATCAATTGCCATCATGTTTACATGTAATGCACAAACAAGTTGAAAATGTTTCACTATGACATGACAACAACTGAGGCATCCATTGATTTTGTTCTGCCCAATTATTTAATGTTGTGCAAATTATTCTCAATATGAAGGGACATGGGAATGGAGGTTTGCTGCACCTTGGGAATGCTTGAGAAGCAGCAAGCTTTAGAGCTCAAGAAAGCTGGTCTAACAGCATACAATCACAATCTTGACACCTCAAGAGAATACTATCCTAATATTATAACCACTAGAACTTATGATGAGCGGCTGGAAACTCTTAAGCATGTACGCGAAGCAGGAATTAATGTGTGTTCAGGTATTCGTTGAAGTATAAAATAATGTTGTGTTTATATATTGACACTTGTGACTCATTGGAATAACAAATTAACAATATGTAGAACCATCAATCTAGACTCTATATTTGATGCATGCATGTTCATGTATATGCAAATACTGAAGTATCACATTATTGGGTGTATACCACCACATATAGTGAGTTGAAACGATTTGATTATAAGTGCAATGTCATTGGCAGCTAAGATCTTTTGAGCAGCCTTAAAGCCTCTTGATGAGAACATAAAACTGATTTTCTTTAGGACATGAAAGTGAACCCTACTTCAAGTATTTTGACATGAGTTCTAATTTCTAAATTGTTAGTAAAAGGTCTTTCAGACCTTTCAATTTGAACTTCTTACTGTTTTTCTTCTTTATGACTTCCTGTTCATAGATAGACGAATCATTAATAATTGTTGGTAGGGTATTCTTAATTGTTATTTTATTATTGGAAGTTAAGGGAATGATTGAAAAATAGTCAGTTGTGTTTGTTTTGACATAGGTTGTGTAGTAAAAAATCTTCATGATGTGCCAATCCTCATCAAAATCTTGCTAACCTCTTATTTTCTTCGATCAGGTGGAATAATAGGGCTCGGTGAGGCTGAAGAGGATAGAATTGGTTTGTTGCATACCCTGTCAACTCTTCCAACTCACCCTGAGAGTGTGCCGATTAATGCACTTATTGCAGTAAAAGGTACACCATTGGAAGACCAGAAGGTAATCCTCATATATTAAGGAATAAAACTTTAAATATTGTTGCAGTGCTTTTCATTAACTTCTGATTCTATAATGATTTGTGCTTTGTACACCTCAGTTCCGCAAAACAGTAATAAAAAAATGTCCATCAGCTTAGCCTAACCATACTGTACTACCAACATAATACGTTGAGTCATCGTAGAAAAGCCCTTGGTAGAGTGTCAACAGTTACCACATTAAGGAACTTTATCTTATTTAGTTATAGTTTTGTTTGAACTTTGATGCTTCACCTTTCAGCATTGGTAGTTTCATAAAACATTGCTTTTCTCTGTTAAGTAGCACGCATGGCTGGGGGCAGATGTCTCCCACCTCAGATCATGACTGGAAACACAATGTCTAGTTCATCACAACTTAAAGCTTAAAACAACTCCACAAAACTGTGATATTCATAGACCACAAAATAATTGACACCCATCCCATCCTCTGACGAAATTCAATGCATTTCTGAAAATTAATTGAACGGATAAGATCTTAAATTTCCTTGATTCAATGGATACAGCTCTCTGAAATGAGTTCTAGGGAAAAGTGGATTAATAACCTTAACTTATTCTGATCTCATTGCTAATCTCAAACTCATTTTTCATCTTCCAGCCAGTGGACATATGGGATATGATTAGGATGATTTCGACAGCAAGAATAACAATGCCAGGTGCAATGGTTAGGCTTTCTGCAGGAAGAGTTCGTTTTTCTGTCCCCGAGCAGGCTCTTTGTTTCCTTGCTGGTGCCAATTCCATCTTTACAGGTGAGAAGTTGTTGACTACACCAAATAATGACTATGATGCTGATCAGAATATGTTCAAATTAC</genome_strand>
        <mrna_strand>GGGATACAATAGGAAGGAAAACCAATATGAACCAGATCGTCGAGTATGTGAAGGAAATAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACATGGGAATGGAGGTTTGCTGCACCTTGGGAATGCTTGAGAAGCAGCAAGCTTTAGAGCTCAAGAAAGCTGGTCTAACAGCATACAATCACAATCTTGACACCTCAAGAGAATACTATCCTAATATTATAACCACTAGAACTTATGATGAGCGGCTGGAAACTCTTAAGCATGTACGCGAAGCAGGAATTAATGTGTGTTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATAATAGGGCTCGGTGAGGCTGAAGAGGATAGAATTGGTTTGTTGCATACCCTGTCAACTCTTCCAACTCACCCTGAGAGTGTGCCGATTAATGCACTTATTGCAGTAAAAGGTACACCATTGGAAGACCAGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTGGACATATGGGATATGATTAGGATGATTTCGACAGCAAGAATAACAATGCCAGGTGCAATGGTTAGGCTTTCTGCAGGAAGAGTTCGTTTTTCTGTCCCCGAGCAGGCTCTTTGTTTCCTTGCTGGTGCCAATTCCATCTTTACAGGTGAGAAGTTGTTGACTACACCAAATAATGACTATGATGCTGATCAGAATATGTTCAAATTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E348030" ref_strand="+" ref_description="SGN-E348030 [cTOF-31-O9]">
      <seq>gtgccgaattcggcacgagggggatacaataggaaggaaaaccaatatgaaccagatcgtcgagtatgtgaaggaaataagggacatgggaatggaggtttgctgcaccttgggaatgcttgagaagcagcaagctttagagctcaagaaagctggtctaacagcatacaatcacaatcttgacacctcaagagaatactatcctaatattataaccactagaacttatgatgagcggctggaaactcttaagcatgtacgcgaagcatgaattaatgtgtgttcaggtggaataatagggctcggtgaggctgaagaggatagaattggtttgttgcataccctgtcaactcttgcaactcaccctgagagtgtgccgattaatgcacttattgcagtaaaaggtacaccattggaagaccagaagccagtggacatatgggatatgattaggatgatttcgacagcatgaataacaatgccaggtgcaatggttaggctttctgcacgaagagttcgtttttctgtccccgagcaggctctttgtttccttgctggtgccaattccatctttacaggtgagcaagtgctgactacaccaaataatgactatgatgctgatcagaatatgttcaaattacttggacttgttcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="49703" stop="53403"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50015" g_stop="50074" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="81" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50075" i_stop="51305" i_length="1231">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51306" g_stop="51511" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="287" r_length="206" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51512" i_stop="52105" i_length="594">
            <donor d_prob="0.739" d_score="0.98"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52106" g_stop="52245" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="427" r_length="140" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52246" i_stop="52875" i_length="630">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="52876" g_stop="53103" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="428" r_stop="655" r_length="228" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E348030" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>634</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E348030" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50015" e_stop="50074"/>
          <exon e_start="51306" e_stop="51511"/>
          <exon e_start="52106" e_stop="52245"/>
          <exon e_start="52876" e_stop="53103"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATACAATAGGAAGGAAAACCAATATGAACCAGATCGTCGAGTATGTGAAGGAAATAAGGTAATGAGCTATAGTTATATTTTTCATTCCAGTGCCTTGGATGATCTCTTCTGATCTTTTTGTTTTCTTTTTCTGATTATGTTTATTTTATTGGTTATGGGAACCTCATGTATACAAGCAGTATAGAATTTTTAAAGCCAATCGATTGCTGTATATGGTGTTATGAACCACTAGAATGTGTTGGGCAAAGGAAAATGCCTGTTTCTGCCTTTTATTGTGGGGGTTGGGTAAAGATTACCATGGTTCATCTTAAAATGTCTAAGCTGTGGGAGGCAATATCTAACAGATTTACGTTTAGGACAGAAGGATATGGTGCTAAATTTTCTTGTAAAAGACACCTGTTTCATGAACTTCAATATCTACTGATACCAACCATTCGCAGATACCATCCTTATTTTCAAACTGTGAGATGTTTCTGGCATTCTGAAATCTCCTTCAGTTTCTGTTTGACAAATAAGCGGAGCTAGTACCTTGCCACAATTTGATTTACCTAGTAATGGTCAAAAGACTTAATGACTAAGCATTAGGAGTCAAAAGTTATATAGGAAAAGAAACAACTCTCTCTATTTACCTTCAATCATGAGGTGAACACTAATTTGAGAAACATATGAGTTAACTCATAAAAGAGACAAGAATCTAGAAACAATAGGCCTCTTGATATTTTGTTAGTTTAAACTAATTCGAATATATCAAGTATCAGACAACTGTAGGCTGGTTAGATGCTGAGGACAGTATTGCAGGGCCTTGTTGTCTATTTTGTTATTTCCTTGTAGCTTTGAAGTTTAAAGAGTGAGGAAACTGGAGTTACGATGATCTCTGAAATTGAGAAGCATTTCTTCTGCTTCGTAGAATGACTACAGAAGCAAGCAGGATTAGGTTTACTAATTAATTGGTTAAACATTAGACCATCTGTTACCCATTCTAAAAGCTTTCTTCCTCGCAAGAAACTTTCATGAGTAGTTCTGTGATTGTGCAACTTCTAATCAAAAACACCACATTTTCTTCTTAGTCCTTGTTTGTGGGTTGTGGCAATAACGCATACCCAAATATTGTTTATTGAAGTTAAACAAAAAATAACAGAAAAACTATAGACTATCAATTGCCATCATGTTTACATGTAATGCACAAACAAGTTGAAAATGTTTCACTATGACATGACAACAACTGAGGCATCCATTGATTTTGTTCTGCCCAATTATTTAATGTTGTGCAAATTATTCTCAATATGAAGGGACATGGGAATGGAGGTTTGCTGCACCTTGGGAATGCTTGAGAAGCAGCAAGCTTTAGAGCTCAAGAAAGCTGGTCTAACAGCATACAATCACAATCTTGACACCTCAAGAGAATACTATCCTAATATTATAACCACTAGAACTTATGATGAGCGGCTGGAAACTCTTAAGCATGTACGCGAAGCAGGAATTAATGTGTGTTCAGGTATTCGTTGAAGTATAAAATAATGTTGTGTTTATATATTGACACTTGTGACTCATTGGAATAACAAATTAACAATATGTAGAACCATCAATCTAGACTCTATATTTGATGCATGCATGTTCATGTATATGCAAATACTGAAGTATCACATTATTGGGTGTATACCACCACATATAGTGAGTTGAAACGATTTGATTATAAGTGCAATGTCATTGGCAGCTAAGATCTTTTGAGCAGCCTTAAAGCCTCTTGATGAGAACATAAAACTGATTTTCTTTAGGACATGAAAGTGAACCCTACTTCAAGTATTTTGACATGAGTTCTAATTTCTAAATTGTTAGTAAAAGGTCTTTCAGACCTTTCAATTTGAACTTCTTACTGTTTTTCTTCTTTATGACTTCCTGTTCATAGATAGACGAATCATTAATAATTGTTGGTAGGGTATTCTTAATTGTTATTTTATTATTGGAAGTTAAGGGAATGATTGAAAAATAGTCAGTTGTGTTTGTTTTGACATAGGTTGTGTAGTAAAAAATCTTCATGATGTGCCAATCCTCATCAAAATCTTGCTAACCTCTTATTTTCTTCGATCAGGTGGAATAATAGGGCTCGGTGAGGCTGAAGAGGATAGAATTGGTTTGTTGCATACCCTGTCAACTCTTCCAACTCACCCTGAGAGTGTGCCGATTAATGCACTTATTGCAGTAAAAGGTACACCATTGGAAGACCAGAAGGTAATCCTCATATATTAAGGAATAAAACTTTAAATATTGTTGCAGTGCTTTTCATTAACTTCTGATTCTATAATGATTTGTGCTTTGTACACCTCAGTTCCGCAAAACAGTAATAAAAAAATGTCCATCAGCTTAGCCTAACCATACTGTACTACCAACATAATACGTTGAGTCATCGTAGAAAAGCCCTTGGTAGAGTGTCAACAGTTACCACATTAAGGAACTTTATCTTATTTAGTTATAGTTTTGTTTGAACTTTGATGCTTCACCTTTCAGCATTGGTAGTTTCATAAAACATTGCTTTTCTCTGTTAAGTAGCACGCATGGCTGGGGGCAGATGTCTCCCACCTCAGATCATGACTGGAAACACAATGTCTAGTTCATCACAACTTAAAGCTTAAAACAACTCCACAAAACTGTGATATTCATAGACCACAAAATAATTGACACCCATCCCATCCTCTGACGAAATTCAATGCATTTCTGAAAATTAATTGAACGGATAAGATCTTAAATTTCCTTGATTCAATGGATACAGCTCTCTGAAATGAGTTCTAGGGAAAAGTGGATTAATAACCTTAACTTATTCTGATCTCATTGCTAATCTCAAACTCATTTTTCATCTTCCAGCCAGTGGACATATGGGATATGATTAGGATGATTTCGACAGCAAGAATAACAATGCCAGGTGCAATGGTTAGGCTTTCTGCAGGAAGAGTTCGTTTTTCTGTCCCCGAGCAGGCTCTTTGTTTCCTTGCTGGTGCCAATTCCATCTTTACAGGTGAGAAGTTGTTGACTACACCAAATAATGACTATGATGCTGATCAGAATATGTTCAAATTACTTGGACTTGTTCCT</genome_strand>
        <mrna_strand>GGATACAATAGGAAGGAAAACCAATATGAACCAGATCGTCGAGTATGTGAAGGAAATAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACATGGGAATGGAGGTTTGCTGCACCTTGGGAATGCTTGAGAAGCAGCAAGCTTTAGAGCTCAAGAAAGCTGGTCTAACAGCATACAATCACAATCTTGACACCTCAAGAGAATACTATCCTAATATTATAACCACTAGAACTTATGATGAGCGGCTGGAAACTCTTAAGCATGTACGCGAAGCATGAATTAATGTGTGTTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATAATAGGGCTCGGTGAGGCTGAAGAGGATAGAATTGGTTTGTTGCATACCCTGTCAACTCTTGCAACTCACCCTGAGAGTGTGCCGATTAATGCACTTATTGCAGTAAAAGGTACACCATTGGAAGACCAGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTGGACATATGGGATATGATTAGGATGATTTCGACAGCATGAATAACAATGCCAGGTGCAATGGTTAGGCTTTCTGCACGAAGAGTTCGTTTTTCTGTCCCCGAGCAGGCTCTTTGTTTCCTTGCTGGTGCCAATTCCATCTTTACAGGTGAGCAAGTGCTGACTACACCAAATAATGACTATGATGCTGATCAGAATATGTTCAAATTACTTGGACTTGTTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E553684" ref_strand="+" ref_description="SGN-E553684 [cTSC-1-O14]">
      <seq>tgcaccttgggaatgcttgagaagcagcaagctttagagctcaagaaagctggtctaacagcatacaatcacaatcttgacacctcaagagaatactatcctaatattataaccactagaacttatgatgagcggctggaaactcttaagcatgtacgcgaagcaggaattaatgtgtgttcaggtggaataatagggctcggtgaggctgaagaggatagaattggtttgttgcataccctgtcaactcttccaactcaccctgagagtgtgccgattaatgcacttattgcagtaaaaggtacaccattggaagaccagaagccagtggacatatgggatatgattaggatgatttcgacagcaagaataacaatgccaggtgcaatggttaggctttctgcaggaagagttcgtttttctgtccccgagcaggctctttgtttccttgctggtgccaattccatctttacaggtgagaagttgttgactacaccaaataatgactatgatgctgatcagaatatgttcaaattacttggacttgttcctaaagctccaaatttctctgaggatgaaaaagattctgaagacgaaaagatggaagcatctgtttagactttagtttagttcattctgtaatgatcaaccagagatctatctttttacttaaatgtatgactctcctcttgaaattttaccatgattctaagctttttaatgtacctaccatgttttcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="51028" stop="53593"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51328" g_stop="51511" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="184" r_length="184" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51512" i_stop="52105" i_length="594">
            <donor d_prob="0.739" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52106" g_stop="52245" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="324" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52246" i_stop="52875" i_length="630">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52876" g_stop="53293" g_length="418"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="742" r_length="418" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E553684" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>742</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E553684" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51328" e_stop="51511"/>
          <exon e_start="52106" e_stop="52245"/>
          <exon e_start="52876" e_stop="53293"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCACCTTGGGAATGCTTGAGAAGCAGCAAGCTTTAGAGCTCAAGAAAGCTGGTCTAACAGCATACAATCACAATCTTGACACCTCAAGAGAATACTATCCTAATATTATAACCACTAGAACTTATGATGAGCGGCTGGAAACTCTTAAGCATGTACGCGAAGCAGGAATTAATGTGTGTTCAGGTATTCGTTGAAGTATAAAATAATGTTGTGTTTATATATTGACACTTGTGACTCATTGGAATAACAAATTAACAATATGTAGAACCATCAATCTAGACTCTATATTTGATGCATGCATGTTCATGTATATGCAAATACTGAAGTATCACATTATTGGGTGTATACCACCACATATAGTGAGTTGAAACGATTTGATTATAAGTGCAATGTCATTGGCAGCTAAGATCTTTTGAGCAGCCTTAAAGCCTCTTGATGAGAACATAAAACTGATTTTCTTTAGGACATGAAAGTGAACCCTACTTCAAGTATTTTGACATGAGTTCTAATTTCTAAATTGTTAGTAAAAGGTCTTTCAGACCTTTCAATTTGAACTTCTTACTGTTTTTCTTCTTTATGACTTCCTGTTCATAGATAGACGAATCATTAATAATTGTTGGTAGGGTATTCTTAATTGTTATTTTATTATTGGAAGTTAAGGGAATGATTGAAAAATAGTCAGTTGTGTTTGTTTTGACATAGGTTGTGTAGTAAAAAATCTTCATGATGTGCCAATCCTCATCAAAATCTTGCTAACCTCTTATTTTCTTCGATCAGGTGGAATAATAGGGCTCGGTGAGGCTGAAGAGGATAGAATTGGTTTGTTGCATACCCTGTCAACTCTTCCAACTCACCCTGAGAGTGTGCCGATTAATGCACTTATTGCAGTAAAAGGTACACCATTGGAAGACCAGAAGGTAATCCTCATATATTAAGGAATAAAACTTTAAATATTGTTGCAGTGCTTTTCATTAACTTCTGATTCTATAATGATTTGTGCTTTGTACACCTCAGTTCCGCAAAACAGTAATAAAAAAATGTCCATCAGCTTAGCCTAACCATACTGTACTACCAACATAATACGTTGAGTCATCGTAGAAAAGCCCTTGGTAGAGTGTCAACAGTTACCACATTAAGGAACTTTATCTTATTTAGTTATAGTTTTGTTTGAACTTTGATGCTTCACCTTTCAGCATTGGTAGTTTCATAAAACATTGCTTTTCTCTGTTAAGTAGCACGCATGGCTGGGGGCAGATGTCTCCCACCTCAGATCATGACTGGAAACACAATGTCTAGTTCATCACAACTTAAAGCTTAAAACAACTCCACAAAACTGTGATATTCATAGACCACAAAATAATTGACACCCATCCCATCCTCTGACGAAATTCAATGCATTTCTGAAAATTAATTGAACGGATAAGATCTTAAATTTCCTTGATTCAATGGATACAGCTCTCTGAAATGAGTTCTAGGGAAAAGTGGATTAATAACCTTAACTTATTCTGATCTCATTGCTAATCTCAAACTCATTTTTCATCTTCCAGCCAGTGGACATATGGGATATGATTAGGATGATTTCGACAGCAAGAATAACAATGCCAGGTGCAATGGTTAGGCTTTCTGCAGGAAGAGTTCGTTTTTCTGTCCCCGAGCAGGCTCTTTGTTTCCTTGCTGGTGCCAATTCCATCTTTACAGGTGAGAAGTTGTTGACTACACCAAATAATGACTATGATGCTGATCAGAATATGTTCAAATTACTTGGACTTGTTCCTAAAGCTCCAAATTTCTCTGAGGATGAAAAAGATTCTGAAGACGAAAAGATGGAAGCATCTGTTTAGACTTTAGTTTAGTTCATTCTGTAATGATCAACCAGAGATCTATCTTTTTACTTAAATGTATGACTCTCCTCTTGAAATTTTACCATGATTCTAAGCTTTTTAATGTACCTACCATGTTTTCATT</genome_strand>
        <mrna_strand>TGCACCTTGGGAATGCTTGAGAAGCAGCAAGCTTTAGAGCTCAAGAAAGCTGGTCTAACAGCATACAATCACAATCTTGACACCTCAAGAGAATACTATCCTAATATTATAACCACTAGAACTTATGATGAGCGGCTGGAAACTCTTAAGCATGTACGCGAAGCAGGAATTAATGTGTGTTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATAATAGGGCTCGGTGAGGCTGAAGAGGATAGAATTGGTTTGTTGCATACCCTGTCAACTCTTCCAACTCACCCTGAGAGTGTGCCGATTAATGCACTTATTGCAGTAAAAGGTACACCATTGGAAGACCAGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTGGACATATGGGATATGATTAGGATGATTTCGACAGCAAGAATAACAATGCCAGGTGCAATGGTTAGGCTTTCTGCAGGAAGAGTTCGTTTTTCTGTCCCCGAGCAGGCTCTTTGTTTCCTTGCTGGTGCCAATTCCATCTTTACAGGTGAGAAGTTGTTGACTACACCAAATAATGACTATGATGCTGATCAGAATATGTTCAAATTACTTGGACTTGTTCCTAAAGCTCCAAATTTCTCTGAGGATGAAAAAGATTCTGAAGACGAAAAGATGGAAGCATCTGTTTAGACTTTAGTTTAGTTCATTCTGTAATGATCAACCAGAGATCTATCTTTTTACTTAAATGTATGACTCTCCTCTTGAAATTTTACCATGATTCTAAGCTTTTTAATGTACCTACCATGTTTTCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E733183" ref_strand="+" ref_description="SGN-E733183 [LB04AG08]">
      <seq>cggataatactatcctaatattataaccactagaacttatgatgagcggctggaaactcttaagcatgtacgcgaagcaggaattaatgtgtgttcaggtggaataatagggctcggtgaggctgaagaggatagaattggtttgttgcataccctgtcaactcttccaactcaccctgagagtgtgccgattaatgcacttattgcagtaaaaggtacaccattggaagaccagaagccagtggacatatgggatatgattaggatgatttcgacagcaagaataacaatgccaggtgcaatggttaggctttctgcaggaagagttcgtttttctgtccccgagcaggctctttgtttccttgctggtgccaattccatctttacaggtgagaagttgttgactacaccaaataatgactatgatgctgatcagaatatgttcaaattacttggacttgttcctaaagctccaaatttctctgaggatgaaaaagattctgaagacgaaaagatggaagcatctgtttagactttagtttagttcattctgtaatgatcaaccagagatctatctttttacttaaatgtatgactctcctcttgaaattttaccatgattctaagctttttantgtanaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaanaaanannncctcgggggggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="51116" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51414" g_stop="51511" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51512" i_stop="52105" i_length="594">
            <donor d_prob="0.739" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52106" g_stop="52245" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="238" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52246" i_stop="52875" i_length="630">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52876" g_stop="53273" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="636" r_length="398" r_score="0.997"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53274" i_stop="54755" i_length="1482">
            <donor d_prob="0.015" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.66"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54756" g_stop="54821" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="637" r_stop="702" r_length="66" r_score="0.545"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E733183" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>702</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E733183" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51414" e_stop="51511"/>
          <exon e_start="52106" e_stop="52245"/>
          <exon e_start="52876" e_stop="53273"/>
          <exon e_start="54756" e_stop="54821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGAATACTATCCTAATATTATAACCACTAGAACTTATGATGAGCGGCTGGAAACTCTTAAGCATGTACGCGAAGCAGGAATTAATGTGTGTTCAGGTATTCGTTGAAGTATAAAATAATGTTGTGTTTATATATTGACACTTGTGACTCATTGGAATAACAAATTAACAATATGTAGAACCATCAATCTAGACTCTATATTTGATGCATGCATGTTCATGTATATGCAAATACTGAAGTATCACATTATTGGGTGTATACCACCACATATAGTGAGTTGAAACGATTTGATTATAAGTGCAATGTCATTGGCAGCTAAGATCTTTTGAGCAGCCTTAAAGCCTCTTGATGAGAACATAAAACTGATTTTCTTTAGGACATGAAAGTGAACCCTACTTCAAGTATTTTGACATGAGTTCTAATTTCTAAATTGTTAGTAAAAGGTCTTTCAGACCTTTCAATTTGAACTTCTTACTGTTTTTCTTCTTTATGACTTCCTGTTCATAGATAGACGAATCATTAATAATTGTTGGTAGGGTATTCTTAATTGTTATTTTATTATTGGAAGTTAAGGGAATGATTGAAAAATAGTCAGTTGTGTTTGTTTTGACATAGGTTGTGTAGTAAAAAATCTTCATGATGTGCCAATCCTCATCAAAATCTTGCTAACCTCTTATTTTCTTCGATCAGGTGGAATAATAGGGCTCGGTGAGGCTGAAGAGGATAGAATTGGTTTGTTGCATACCCTGTCAACTCTTCCAACTCACCCTGAGAGTGTGCCGATTAATGCACTTATTGCAGTAAAAGGTACACCATTGGAAGACCAGAAGGTAATCCTCATATATTAAGGAATAAAACTTTAAATATTGTTGCAGTGCTTTTCATTAACTTCTGATTCTATAATGATTTGTGCTTTGTACACCTCAGTTCCGCAAAACAGTAATAAAAAAATGTCCATCAGCTTAGCCTAACCATACTGTACTACCAACATAATACGTTGAGTCATCGTAGAAAAGCCCTTGGTAGAGTGTCAACAGTTACCACATTAAGGAACTTTATCTTATTTAGTTATAGTTTTGTTTGAACTTTGATGCTTCACCTTTCAGCATTGGTAGTTTCATAAAACATTGCTTTTCTCTGTTAAGTAGCACGCATGGCTGGGGGCAGATGTCTCCCACCTCAGATCATGACTGGAAACACAATGTCTAGTTCATCACAACTTAAAGCTTAAAACAACTCCACAAAACTGTGATATTCATAGACCACAAAATAATTGACACCCATCCCATCCTCTGACGAAATTCAATGCATTTCTGAAAATTAATTGAACGGATAAGATCTTAAATTTCCTTGATTCAATGGATACAGCTCTCTGAAATGAGTTCTAGGGAAAAGTGGATTAATAACCTTAACTTATTCTGATCTCATTGCTAATCTCAAACTCATTTTTCATCTTCCAGCCAGTGGACATATGGGATATGATTAGGATGATTTCGACAGCAAGAATAACAATGCCAGGTGCAATGGTTAGGCTTTCTGCAGGAAGAGTTCGTTTTTCTGTCCCCGAGCAGGCTCTTTGTTTCCTTGCTGGTGCCAATTCCATCTTTACAGGTGAGAAGTTGTTGACTACACCAAATAATGACTATGATGCTGATCAGAATATGTTCAAATTACTTGGACTTGTTCCTAAAGCTCCAAATTTCTCTGAGGATGAAAAAGATTCTGAAGACGAAAAGATGGAAGCATCTGTTTAGACTTTAGTTTAGTTCATTCTGTAATGATCAACCAGAGATCTATCTTTTTACTTAAATGTATGACTCTCCTCTTGAAATTTTACCATGATTCTAAGCTTTTTAATGTACCTACCATGTTTTCATTTATTTTGTCTATGATTGTTCTTTTAAATTTTTTTTTATCTTAGCTAATTTTGTTGTCTGTACATATACTTTATCACTACCTCATTAGACATTCGAAAAATGAAACAAATATATAATCTTCATATTCAAATAACACATTTGTAACTACTTTATCAATATACATAAGTAGAGAGGTGTGAAAAAATTGTTGCTTAATTAGTGGCACGTGATTGGGAATTTAATAGTCACCCACCTACTATTGAAAGGAAAACAGAGATTCTAGAAAGGTATTTCTGGATCCAACTTAATTTCAAATTATTTTTTATTCTTAAATTTATCGTCAAATGAATATTAAGATTTAATTTAAATCATAATTTTTTTAAGAAAAATATTTTGATTTTTTTATATCAAATTAAACGAGGTCATTGAGAGTATCTTTCTTAAAAGACTTTTTACTTAATTAATTCCTCTAATATTGGATTCATTTGACAAATAATCTTTGCATAAATGTTTGTTTTTACAATATGAATTTACATCGAAAAATTCTGTATAGAAGTAAACTCAATTCGAAATCTAGTCAATTTTTTTGTTTTTATCTTTAGTACGATGCTTATTAATATCCCTAATTTATAATATTACTAATTTACTACCCATAACTTGACCTATCCAAACATTTATTTAAATGATCCGACCCACCTCAATTAGTGTGCACTATCCATAGACTCAGGGGCGGATCCACGTGGTATCCAGGGATTCATTTGAACTCCTTGGTAAAAATTACACGGTATCTATAAGGTAAATTTTTTGTATTTCTGTAGGTATATATATTTTGAATCCCTTCAACAACAAAGAGAAACAGATGGTGCAATTGCAAGTACCCCCAAATTATGTTGTACGTCACTGGTTCGAATTCCAATGAAAGCATTGAAGTTTTGATTTTTAAACCAAGAAGGATTCAAGATTTTCATTTCCAAAGACTTATTTACACGTTTATACTTTTATTTTTTCAAACCTCCTAAACAAAAATCCGTCAATTAGGTGCTTCTCGTGATAAATAAAACGTGCACGTGTCTCGAATTTCAATGAGAGCACTAAAATTTTGACTTTTAAACCCAAAAGAATTCAAGTCTCCTAAACAAAGATCCGTCAGTTAGGTGGTCTTCGTGATAAATAAAATGTGCATGTGTCTCAAATTCCAGTGAAAGCATTAAAAATTTGATTTCTAAATCCTAAGAATTGGAAGTTTCCATTTCTAAAGACTTATTTACACATTTTTACTTTTATTTTTCAAACCTTTTAAACAAAAATTCTTCGATTAGGTATTCCTCGTGATAAATAAAAACCAATACGTGTCCATTTAAGGGAGAGATTCATGTATGGCCATAATATCATTTTTACTAATAAATTAGTTATGGGACTCCTATTTTACTTTAAATGATAAAAATATAAATGAATCATGTGTATGAAGAGATTAAGTATATAGAGAAAAAAATATTATAAAAGAAAAAAGAACTACATAATAAATAATAAAGATTTATAAAGTGAATTGC</genome_strand>
        <mrna_strand>CGGATAATACTATCCTAATATTATAACCACTAGAACTTATGATGAGCGGCTGGAAACTCTTAAGCATGTACGCGAAGCAGGAATTAATGTGTGTTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATAATAGGGCTCGGTGAGGCTGAAGAGGATAGAATTGGTTTGTTGCATACCCTGTCAACTCTTCCAACTCACCCTGAGAGTGTGCCGATTAATGCACTTATTGCAGTAAAAGGTACACCATTGGAAGACCAGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTGGACATATGGGATATGATTAGGATGATTTCGACAGCAAGAATAACAATGCCAGGTGCAATGGTTAGGCTTTCTGCAGGAAGAGTTCGTTTTTCTGTCCCCGAGCAGGCTCTTTGTTTCCTTGCTGGTGCCAATTCCATCTTTACAGGTGAGAAGTTGTTGACTACACCAAATAATGACTATGATGCTGATCAGAATATGTTCAAATTACTTGGACTTGTTCCTAAAGCTCCAAATTTCTCTGAGGATGAAAAAGATTCTGAAGACGAAAAGATGGAAGCATCTGTTTAGACTTTAGTTTAGTTCATTCTGTAATGATCAACCAGAGATCTATCTTTTTACTTAAATGTATGACTCTCCTCTTGAAATTTTACCATGATTCTAAGCTTTTTANT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAANANNNCCTCGGGGGGGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E349589" ref_strand="-" ref_description="SGN-E349589 [cTOS-1-P13]">
      <seq>aatattataaccactagaacttatgatgagcggctggaaacttttaagcatgtacgcgaagcaggaattaatgtgtgttcaggtggaataatagggctcggtgaggctgaagaggatagaattggtttgttgcataccctgtcaactcttccaactcaccctgagagtgtgccgattaatgcacttattgcagtaaaaggtacaccattggaagaccagaagccagtggacatatgggatatgattaggatgatttcgacagcaagaataacaatgccaggtgcaatggttaggctttttgcaggaagagttcgtttttctgtccccgagcaggctctttgtttccttgctggtgccaattccatctttacaggtgagaagttgttgactaccccaaataatgactatgatgctgatcagaatatgttcaaattacttggacttgttcctaaagctccaaatttttttgaggatgaaaaagattttgaagacgaaaagatggaagcatctgtttagactttagtttagttcattctgtaatgatcaaccagagatctatctttttacttaaatgtatgactctcctcttgaaattttaccatgattttaagctttttaatgtacctaccatgttttcattaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="51130" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51430" g_stop="51511" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="82" r_length="82" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51512" i_stop="52105" i_length="594">
            <donor d_prob="0.739" d_score="0.98"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52106" g_stop="52245" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="83" r_stop="222" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52246" i_stop="52875" i_length="630">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52876" g_stop="53294" g_length="419"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="641" r_length="419" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53295" i_stop="55286" i_length="1992">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.698" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55287" g_stop="55324" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="642" r_stop="679" r_length="38" r_score="0.684"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E349589" ref_strand="-">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>679</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E349589" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="51430" e_stop="51511"/>
          <exon e_start="52106" e_stop="52245"/>
          <exon e_start="52876" e_stop="53294"/>
          <exon e_start="55287" e_stop="55324"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATATTATAACCACTAGAACTTATGATGAGCGGCTGGAAACTCTTAAGCATGTACGCGAAGCAGGAATTAATGTGTGTTCAGGTATTCGTTGAAGTATAAAATAATGTTGTGTTTATATATTGACACTTGTGACTCATTGGAATAACAAATTAACAATATGTAGAACCATCAATCTAGACTCTATATTTGATGCATGCATGTTCATGTATATGCAAATACTGAAGTATCACATTATTGGGTGTATACCACCACATATAGTGAGTTGAAACGATTTGATTATAAGTGCAATGTCATTGGCAGCTAAGATCTTTTGAGCAGCCTTAAAGCCTCTTGATGAGAACATAAAACTGATTTTCTTTAGGACATGAAAGTGAACCCTACTTCAAGTATTTTGACATGAGTTCTAATTTCTAAATTGTTAGTAAAAGGTCTTTCAGACCTTTCAATTTGAACTTCTTACTGTTTTTCTTCTTTATGACTTCCTGTTCATAGATAGACGAATCATTAATAATTGTTGGTAGGGTATTCTTAATTGTTATTTTATTATTGGAAGTTAAGGGAATGATTGAAAAATAGTCAGTTGTGTTTGTTTTGACATAGGTTGTGTAGTAAAAAATCTTCATGATGTGCCAATCCTCATCAAAATCTTGCTAACCTCTTATTTTCTTCGATCAGGTGGAATAATAGGGCTCGGTGAGGCTGAAGAGGATAGAATTGGTTTGTTGCATACCCTGTCAACTCTTCCAACTCACCCTGAGAGTGTGCCGATTAATGCACTTATTGCAGTAAAAGGTACACCATTGGAAGACCAGAAGGTAATCCTCATATATTAAGGAATAAAACTTTAAATATTGTTGCAGTGCTTTTCATTAACTTCTGATTCTATAATGATTTGTGCTTTGTACACCTCAGTTCCGCAAAACAGTAATAAAAAAATGTCCATCAGCTTAGCCTAACCATACTGTACTACCAACATAATACGTTGAGTCATCGTAGAAAAGCCCTTGGTAGAGTGTCAACAGTTACCACATTAAGGAACTTTATCTTATTTAGTTATAGTTTTGTTTGAACTTTGATGCTTCACCTTTCAGCATTGGTAGTTTCATAAAACATTGCTTTTCTCTGTTAAGTAGCACGCATGGCTGGGGGCAGATGTCTCCCACCTCAGATCATGACTGGAAACACAATGTCTAGTTCATCACAACTTAAAGCTTAAAACAACTCCACAAAACTGTGATATTCATAGACCACAAAATAATTGACACCCATCCCATCCTCTGACGAAATTCAATGCATTTCTGAAAATTAATTGAACGGATAAGATCTTAAATTTCCTTGATTCAATGGATACAGCTCTCTGAAATGAGTTCTAGGGAAAAGTGGATTAATAACCTTAACTTATTCTGATCTCATTGCTAATCTCAAACTCATTTTTCATCTTCCAGCCAGTGGACATATGGGATATGATTAGGATGATTTCGACAGCAAGAATAACAATGCCAGGTGCAATGGTTAGGCTTTCTGCAGGAAGAGTTCGTTTTTCTGTCCCCGAGCAGGCTCTTTGTTTCCTTGCTGGTGCCAATTCCATCTTTACAGGTGAGAAGTTGTTGACTACACCAAATAATGACTATGATGCTGATCAGAATATGTTCAAATTACTTGGACTTGTTCCTAAAGCTCCAAATTTCTCTGAGGATGAAAAAGATTCTGAAGACGAAAAGATGGAAGCATCTGTTTAGACTTTAGTTTAGTTCATTCTGTAATGATCAACCAGAGATCTATCTTTTTACTTAAATGTATGACTCTCCTCTTGAAATTTTACCATGATTCTAAGCTTTTTAATGTACCTACCATGTTTTCATTTATTTTGTCTATGATTGTTCTTTTAAATTTTTTTTTATCTTAGCTAATTTTGTTGTCTGTACATATACTTTATCACTACCTCATTAGACATTCGAAAAATGAAACAAATATATAATCTTCATATTCAAATAACACATTTGTAACTACTTTATCAATATACATAAGTAGAGAGGTGTGAAAAAATTGTTGCTTAATTAGTGGCACGTGATTGGGAATTTAATAGTCACCCACCTACTATTGAAAGGAAAACAGAGATTCTAGAAAGGTATTTCTGGATCCAACTTAATTTCAAATTATTTTTTATTCTTAAATTTATCGTCAAATGAATATTAAGATTTAATTTAAATCATAATTTTTTTAAGAAAAATATTTTGATTTTTTTATATCAAATTAAACGAGGTCATTGAGAGTATCTTTCTTAAAAGACTTTTTACTTAATTAATTCCTCTAATATTGGATTCATTTGACAAATAATCTTTGCATAAATGTTTGTTTTTACAATATGAATTTACATCGAAAAATTCTGTATAGAAGTAAACTCAATTCGAAATCTAGTCAATTTTTTTGTTTTTATCTTTAGTACGATGCTTATTAATATCCCTAATTTATAATATTACTAATTTACTACCCATAACTTGACCTATCCAAACATTTATTTAAATGATCCGACCCACCTCAATTAGTGTGCACTATCCATAGACTCAGGGGCGGATCCACGTGGTATCCAGGGATTCATTTGAACTCCTTGGTAAAAATTACACGGTATCTATAAGGTAAATTTTTTGTATTTCTGTAGGTATATATATTTTGAATCCCTTCAACAACAAAGAGAAACAGATGGTGCAATTGCAAGTACCCCCAAATTATGTTGTACGTCACTGGTTCGAATTCCAATGAAAGCATTGAAGTTTTGATTTTTAAACCAAGAAGGATTCAAGATTTTCATTTCCAAAGACTTATTTACACGTTTATACTTTTATTTTTTCAAACCTCCTAAACAAAAATCCGTCAATTAGGTGCTTCTCGTGATAAATAAAACGTGCACGTGTCTCGAATTTCAATGAGAGCACTAAAATTTTGACTTTTAAACCCAAAAGAATTCAAGTCTCCTAAACAAAGATCCGTCAGTTAGGTGGTCTTCGTGATAAATAAAATGTGCATGTGTCTCAAATTCCAGTGAAAGCATTAAAAATTTGATTTCTAAATCCTAAGAATTGGAAGTTTCCATTTCTAAAGACTTATTTACACATTTTTACTTTTATTTTTCAAACCTTTTAAACAAAAATTCTTCGATTAGGTATTCCTCGTGATAAATAAAAACCAATACGTGTCCATTTAAGGGAGAGATTCATGTATGGCCATAATATCATTTTTACTAATAAATTAGTTATGGGACTCCTATTTTACTTTAAATGATAAAAATATAAATGAATCATGTGTATGAAGAGATTAAGTATATAGAGAAAAAAATATTATAAAAGAAAAAAGAACTACATAATAAATAATAAAGATTTATAAAGTGAATTGCACCAAAGAATGTGGTAAATAAATTGATTAAGAGTCTATCCCGTTGAATTAAAGTTTACAAAAGCTGATTCGAATAGAGAATAGGGGCAAATTTATAAATTTGGATAAAAAAAAATACAACAACAATAGCATAATTTGTGAAATTTTAAAAGAATAGAGTATACAAAAACATTATTATAATTAAAAGATTATTGCTTGACTCAGTTTAACTAAAAAGTAATCCACCAAAGATTCACTATATCACGGCTCGTTAAATTTGTCAATATATCTTATTTAAATACTCATACTTTTATAGTTTAAATATCTAAACACATAATTAAAATGTTCACACTAAATAATTTCGATTTAAAGTTTTAAACTTATTTGCTCATATTCTCTAAGGCTTGTTACTTATTTAAGTTAAAATAATTAAGTAAATTACAATTTCTTTTACGGTAAGTTCAGTTTTTAAATATTCAATTGGCAGAAAAATGTAAAAAATTCAAATTTCAACAAAAAAAGAAA</genome_strand>
        <mrna_strand>AATATTATAACCACTAGAACTTATGATGAGCGGCTGGAAACTTTTAAGCATGTACGCGAAGCAGGAATTAATGTGTGTTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATAATAGGGCTCGGTGAGGCTGAAGAGGATAGAATTGGTTTGTTGCATACCCTGTCAACTCTTCCAACTCACCCTGAGAGTGTGCCGATTAATGCACTTATTGCAGTAAAAGGTACACCATTGGAAGACCAGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTGGACATATGGGATATGATTAGGATGATTTCGACAGCAAGAATAACAATGCCAGGTGCAATGGTTAGGCTTTTTGCAGGAAGAGTTCGTTTTTCTGTCCCCGAGCAGGCTCTTTGTTTCCTTGCTGGTGCCAATTCCATCTTTACAGGTGAGAAGTTGTTGACTACCCCAAATAATGACTATGATGCTGATCAGAATATGTTCAAATTACTTGGACTTGTTCCTAAAGCTCCAAATTTTTTTGAGGATGAAAAAGATTTTGAAGACGAAAAGATGGAAGCATCTGTTTAGACTTTAGTTTAGTTCATTCTGTAATGATCAACCAGAGATCTATCTTTTTACTTAAATGTATGACTCTCCTCTTGAAATTTTACCATGATTTTAAGCTTTTTAATGTACCTACCATGTTTTCATTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E622063" ref_strand="-" ref_description="SGN-E622063 [72426]">
      <seq>tttttttttttttttttttttttttttttaaatagcaaatcacattaacatggtacattaaaaagcttagaataatcatggtaaaatttcatgaggagtcatacatttatgaaaaagatagatccctggtggatcatttaagaatgaactaaactaaaagtctaaacagatgcttccatcttttcgtcttcagaatctttttcatcctcagagaaatttggagctttaggaacaagtccaagtaatttgaacatattctgatcagcatcatagtcattatttggtgtagtcaacaacttctcacctgtaaagatggaattggcaccagcaaggaaacagagagcctgctcggggacagaaaaccgaactcttcctgcagaaagcctaaccattgcgcctggcattgttattcttgctgtcgaaatcatcctaatcatatcccatatgtccactggcttctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="153939" stop="52574"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54781" g_stop="54727" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="0.691"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54726" i_stop="53278" i_length="1449">
            <donor d_prob="0.000" d_score="0.68"/>
            <acceptor a_prob="0.560" a_score="0.81"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53277" g_stop="52869" g_length="409"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="462" r_length="410" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E622063" ref_strand="-">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E622063" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="54781" e_stop="54727"/>
          <exon e_start="53277" e_stop="52869"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTTTCTTTTATAATATTTTTTTCTCTATATACTTAATCTCTTCATACACATGATTCATTTATATTTTTATCATTTAAAGTAAAATAGGAGTCCCATAACTAATTTATTAGTAAAAATGATATTATGGCCATACATGAATCTCTCCCTTAAATGGACACGTATTGGTTTTTATTTATCACGAGGAATACCTAATCGAAGAATTTTTGTTTAAAAGGTTTGAAAAATAAAAGTAAAAATGTGTAAATAAGTCTTTAGAAATGGAAACTTCCAATTCTTAGGATTTAGAAATCAAATTTTTAATGCTTTCACTGGAATTTGAGACACATGCACATTTTATTTATCACGAAGACCACCTAACTGACGGATCTTTGTTTAGGAGACTTGAATTCTTTTGGGTTTAAAAGTCAAAATTTTAGTGCTCTCATTGAAATTCGAGACACGTGCACGTTTTATTTATCACGAGAAGCACCTAATTGACGGATTTTTGTTTAGGAGGTTTGAAAAAATAAAAGTATAAACGTGTAAATAAGTCTTTGGAAATGAAAATCTTGAATCCTTCTTGGTTTAAAAATCAAAACTTCAATGCTTTCATTGGAATTCGAACCAGTGACGTACAACATAATTTGGGGGTACTTGCAATTGCACCATCTGTTTCTCTTTGTTGTTGAAGGGATTCAAAATATATATACCTACAGAAATACAAAAAATTTACCTTATAGATACCGTGTAATTTTTACCAAGGAGTTCAAATGAATCCCTGGATACCACGTGGATCCGCCCCTGAGTCTATGGATAGTGCACACTAATTGAGGTGGGTCGGATCATTTAAATAAATGTTTGGATAGGTCAAGTTATGGGTAGTAAATTAGTAATATTATAAATTAGGGATATTAATAAGCATCGTACTAAAGATAAAAACAAAAAAATTGACTAGATTTCGAATTGAGTTTACTTCTATACAGAATTTTTCGATGTAAATTCATATTGTAAAAACAAACATTTATGCAAAGATTATTTGTCAAATGAATCCAATATTAGAGGAATTAATTAAGTAAAAAGTCTTTTAAGAAAGATACTCTCAATGACCTCGTTTAATTTGATATAAAAAAATCAAAATATTTTTCTTAAAAAAATTATGATTTAAATTAAATCTTAATATTCATTTGACGATAAATTTAAGAATAAAAAATAATTTGAAATTAAGTTGGATCCAGAAATACCTTTCTAGAATCTCTGTTTTCCTTTCAATAGTAGGTGGGTGACTATTAAATTCCCAATCACGTGCCACTAATTAAGCAACAATTTTTTCACACCTCTCTACTTATGTATATTGATAAAGTAGTTACAAATGTGTTATTTGAATATGAAGATTATATATTTGTTTCATTTTTCGAATGTCTAATGAGGTAGTGATAAAGTATATGTACAGACAACAAAATTAGCTAAGATAAAAAAAAATTTAAAAGAACAATCATAGACAAAATAAATGAAAACATGGTAGGTACATTAAAAAGCTTAG---AATCATGGTAAAATTTCAAGAGGAGAGTCATACATTTAAGTAAAAAGATAGATCTCTGGTTGATCATTACAGAATGAACTAAACT-AAAGTCTAAACAGATGCTTCCATCTTTTCGTCTTCAGAATCTTTTTCATCCTCAGAGAAATTTGGAGCTTTAGGAACAAGTCCAAGTAATTTGAACATATTCTGATCAGCATCATAGTCATTATTTGGTGTAGTCAACAACTTCTCACCTGTAAAGATGGAATTGGCACCAGCAAGGAAACAAAGAGCCTGCTCGGGGACAGAAAAACGAACTCTTCCTGCAGAAAGCCTAACCATTGCACCTGGCATTGTTATTCTTGCTGTCGAAATCATCCTAATCATATCCCATATGTCCACTGGCTGGAAG</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATAGCAAATCACAT--TA-ACATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACATTAAAAAGCTTAGAATAATCATGGTAAAATTTCATGA-G-GAGTCATACATTTATG-AAAAAGATAGATCCCTGGTGGATCATTTAAGAATGAACTAAACTAAAAGTCTAAACAGATGCTTCCATCTTTTCGTCTTCAGAATCTTTTTCATCCTCAGAGAAATTTGGAGCTTTAGGAACAAGTCCAAGTAATTTGAACATATTCTGATCAGCATCATAGTCATTATTTGGTGTAGTCAACAACTTCTCACCTGTAAAGATGGAATTGGCACCAGCAAGGAAACAGAGAGCCTGCTCGGGGACAGAAAACCGAACTCTTCCTGCAGAAAGCCTAACCATTGCGCCTGGCATTGTTATTCTTGCTGTCGAAATCATCCTAATCATATCCCATATGTCCACTGGCTTCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E419445" ref_strand="+" ref_description="SGN-E419445 [STM-29-J23]">
      <seq>aaagcttagaataatcatggtaaaatttcatgaggagtcatagatttaggtaaaagatagatccctggtggatcatttcagaatgaactaaactataaactaaagtctaaacagatgcttccatcttttcgtcttcagaatctttttcatcctcagagaaatttggagctttaggaacaagtccaagtaatttgaacatattctgatcagcatcatagtcattatttggtgtagtcaacaacttctcacctgtaaagatggaattggcaccagcaaggaaacaaagagcctgctcggggacagaaaaccgaactcttcctgcagaaagcctaaccattgcgcctggcattgttattcttgctgtcgaaatcatcctaatcatatcccatatgtccactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="53561" stop="52577"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53259" g_stop="52877" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="399" r_length="387" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E419445" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>383</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E419445" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53259" e_stop="52877"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCATGGTAAAATTTCAAGAGGAGAGTCATACATTTAAGTAAAAAGATAGATCTCTGGTTGATCATTACAGAATG-----AACTA-AA-CTAAAGTCTAAACAGATGCTTCCATCTTTTCGTCTTCAGAATCTTTTTCATCCTCAGAGAAATTTGGAGCTTTAGGAACAAGTCCAAGTAATTTGAACATATTCTGATCAGCATCATAGTCATTATTTGGTGTAGTCAACAACTTCTCACCTGTAAAGATGGAATTGGCACCAGCAAGGAAACAAAGAGCCTGCTCGGGGACAGAAAAACGAACTCTTCCTGCAGAAAGCCTAACCATTGCACCTGGCATTGTTATTCTTGCTGTCGAAATCATCCTAATCATATCCCATATGTCCACTG</genome_strand>
        <mrna_strand>AATCATGGTAAAATTTCATGA-G-GAGTCATAGATTTAGGT-AAAAGATAGATCCCTGGTGGATCATTTCAGAATGAACTAAACTATAAACTAAAGTCTAAACAGATGCTTCCATCTTTTCGTCTTCAGAATCTTTTTCATCCTCAGAGAAATTTGGAGCTTTAGGAACAAGTCCAAGTAATTTGAACATATTCTGATCAGCATCATAGTCATTATTTGGTGTAGTCAACAACTTCTCACCTGTAAAGATGGAATTGGCACCAGCAAGGAAACAAAGAGCCTGCTCGGGGACAGAAAACCGAACTCTTCCTGCAGAAAGCCTAACCATTGCGCCTGGCATTGTTATTCTTGCTGTCGAAATCATCCTAATCATATCCCATATGTCCACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E723194" ref_strand="+" ref_description="SGN-E723194 [FC19CH06]">
      <seq>aatcggccgaattgggaagaacaacaactaccaaaattaagagcacattttcctaattaaagtaataaatttcgctttcattgccaaatatcttgtttgattttgattaccccatttaattaattttttttttgacttatatatgcataggttagatagaataaaaaaatgctgagtttcaccaatttagctgctcttttctttcttgttcttgctttgttcttgttctatagatacccatctttttctcttatggctgaaggatcaccaaaatctatttatgatttcactgtgaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttctccttattgtcaatgttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatattttgtatgaaaagtacaaagatcaaggttttgaaattttagcatttccttgtaaccagttcctgtggcaagaacccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcagaaaaaggcggtttccttggaagtgctgtcaagtggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacataaaaaatctgttgggtgtggcttgagcactacaggtgtgaaagttcagcatatgtattgaccttcagttggaagtgctttcatggttctatctttttccttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55118" stop="59555"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55418" g_stop="55700" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="297" r_length="283" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="374" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="436" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="555" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="556" r_stop="723" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59145" g_stop="59255" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="724" r_stop="834" r_length="111" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E723194" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>820</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E723194" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55418" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59255"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGAACAACAACTACCAAAATTAAGAGCACATTTTCCTAATTAAAGTAATAAATTTCGCTTTCATTGCCAAATATCTTGTTTGATTTTGATTACCCCATTTAATTAATTTTTTTTTTGACTTATATATGCATAGGTTAGATAGAATAAGAAGATGCTGAGTTTCACCAATTTAGCTGCTCTTTTCTTTCTTGTTCTTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCT</genome_strand>
        <mrna_strand>GGAAGAACAACAACTACCAAAATTAAGAGCACATTTTCCTAATTAAAGTAATAAATTTCGCTTTCATTGCCAAATATCTTGTTTGATTTTGATTACCCCATTTAATTAATTTTTTTTTTGACTTATATATGCATAGGTTAGATAGAATAAAAAAATGCTGAGTTTCACCAATTTAGCTGCTCTTTTCTTTCTTGTTCTTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAAAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E724423" ref_strand="+" ref_description="SGN-E724423 [FC24AC10]">
      <seq>ttggcggccaatcggccgaattggatgctgagtttcccattttagctgctcttttctttcttgttcttgctttgttcttgttctatagatacccatctttttctcttatggctgaaggatcaccaaaatctatttatgatttcactgtgaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttctccttattgtcaatgttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatattttgtatgagaagtacaaagatcaaggttttgaaattttagcatttccttgtaaccagttcctgtggcaagaacccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcaaaaaaaggcggtttccttggaagtgctgtcaagtggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacataaaaaatctgttgggtgtggcttgagcactacaggtgtgaaagttcagcatatgtattgaccttcagttggaagtgctttcatggttctatctttttccttcttccctgcctacgaaacaagcgagcttgtaccccacccccttagtttttccttgttgatgtactttggttgtgtaaactcgttcattgccatgaatttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55271" stop="59654"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55572" g_stop="55700" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="152" r_length="128" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="229" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="291" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="410" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="578" r_length="168" r_score="0.994"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59145" g_stop="59354" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="579" r_stop="788" r_length="210" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E724423" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>765</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E724423" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55572" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59354"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCTGAGTTTCACCAATTTAGCTGCTCTTTTCTTTCTTGTTCTTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGT</genome_strand>
        <mrna_strand>ATGCTGAGTTTC-CCATTTTAGCTGCTCTTTTCTTTCTTGTTCTTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAAAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E718464" ref_strand="+" ref_description="SGN-E718464 [FC04DA06]">
      <seq>gggcgattggcggccaatcggccgaattggctgagtttcaccaatttagctgctcttttctttcttgttcttgctttgttcttgttctatagatacccatctttttctcttatggctgaaggatcaccaaaatctatttatgatttcactgtgaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttctccttattgtcaatgttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatattttgtatgagaagtacaaagatcaaggttttgaaattttagcatttccttgtaaccagttcctgtggcaagaacccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcagaaaaaggcggtttccttggaagtgctgtcaagtggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacataaaaaatctgttgggtgtggcttgagcactacaggtgtgaaagttcagcatatgtattgaccttcagttggaagtgctttcatggttctatctttttccttcttccctgcctacgaaacaagcgagcttgtaccccacccccttagtttttccttgttgatgtactttggttgtgtaaactcgttcattgccatgaatttgtaataaaagttgcatagtagttgttttaatgactcgggactgtagttgctcgatatacaagtatgttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55263" stop="59722"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55574" g_stop="55700" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="156" r_length="127" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="233" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="295" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="414" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="582" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59145" g_stop="59422" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="583" r_stop="860" r_length="278" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E718464" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>831</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E718464" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55574" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59422"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGAGTTTCACCAATTTAGCTGCTCTTTTCTTTCTTGTTCTTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTAT</genome_strand>
        <mrna_strand>GCTGAGTTTCACCAATTTAGCTGCTCTTTTCTTTCTTGTTCTTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E711367" ref_strand="+" ref_description="SGN-E711367 [FB01DC07]">
      <seq>atttagctgctcttttctttcttgttcttgctttgttcttgttctatagatacccatctttttctcttatggctgaaggatcaccaaaatctatttatgatttcactgtgaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttctccttattgtcaatgttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatattttgtatgagaagtacaaagatcaaggttttgaaattttagcatttccttgtaaccagttcctgtggcaagaacccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcagaaaaaggcggtttccttggaagtgctgtcaagtggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacataaaaaatctgttgggtgtggcttgagcactacaggtgtgaaagttcagcatatgtattgaccttcagttggaagtgctttcatggttctatctttttccttcttccctgcctacgaaacaagcgagcttgtaccccacccccttagtttttccttgttgatgtactttggttgtgtaaactcgttcattgccctgaatttgtaataaaagttgcatagtagttgttttaatgactcgggaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55288" stop="59692"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55588" g_stop="55700" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="113" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="190" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="252" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="371" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="539" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59145" g_stop="59402" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="540" r_stop="797" r_length="258" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E711367" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>797</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E711367" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55588" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59402"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTAGCTGCTCTTTTCTTTCTTGTTCTTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGC</genome_strand>
        <mrna_strand>ATTTAGCTGCTCTTTTCTTTCTTGTTCTTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCCTGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E747499" ref_strand="+" ref_description="SGN-E747499 [GI|31872079]">
      <seq>agctcttttctttcttgttcttgctttgttcttgttctatagatacccatctttttctctatggctgaaggatcaccaaaatctatttatgatttcactgtgaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttctccttattgtcaatgttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatattttgtatgagaagtacaaagatcaaggttttgaaattttagcatttccttgtaaccagttcctgtggcaagaacccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcagaaaaaggcggtttccttggaagtgctgtcaagtggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacataaaaaatctgttgggtgtggcttgagcactacaggtgtgaaagttcagcatatgtattgaccttcagttggaagtgctttcatggttctatctttttccttcttccctgcctacgaaacaagcgagcttgtaccccacccccttagtttttccttgttgatgtactttggttgtgtaaactcgttcattgccatgaatttgtaataaaagttgcatagtaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55296" stop="73370"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55595" g_stop="55700" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="182" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="244" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="363" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="531" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59145" g_stop="59372" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="532" r_stop="759" r_length="228" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="59373" i_stop="60139" i_length="767">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="60140" g_stop="60156" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="760" r_stop="776" r_length="17" r_score="0.765"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E747499" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>777</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E747499" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55595" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59372"/>
          <exon e_start="60140" e_stop="60156"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTCTTTTCTTTCTTGTTCTTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAGGATGTCTTGCGTAGGTAAACTGATTATTGTTGGTGCTATGAACGATGATATTCGTTGTTCTACGAAATATGATGACTCTCATTGCTCTAGAAATGAGGTTGAGTTTTTTGCTGCTTAATGAGAACAATTTCTTAAAATGTGTTTCAAGATTTTCAAGTACTGAGGAATGTTCATTTGCCACTCCACGCAAAGATAGGGTGATTTGCTACGTTTTTTAATTTTATGGCTTTAAATTAAAGATACGCATAACGAACTACTTTATTTTGTGGCCATATGTCACATGGAAGAACTACAGTACACTAAGCTTTGACTATTCGGGAGAAAGATTGTGTGCTATTGTGCAAGAAATTTTTTTACCGTCAAATCTTAAACACACGACAACAACTAACAACTGTTTTTACAAAGTTCTATTAGAGATTTGATTCCTTCACAGAATTACCAATTAACCACAACTTGCAAGGATATCTTAGAATATGCTTCATTTTTTTTTATCCTTTGGAGTAAAAAGACTTTCGGTTAAAAGTTTCAAAGATACTGTTGGAACATTATCGAAACGTATCTGACATGTAAGTAGATTGATTGATAAACGCGATTGAGTTCTGTTACTCAAAAAGAGAACATATAACAAGGAAGAAACTTGATTTATTAATAACCAAGAACAGTATTTTGATCAGCATTACATAAGAAAACAAAATTAAAACA</genome_strand>
        <mrna_strand>AGCTCTTTTCTTTCTTGTTCTTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTC-TATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E459694" ref_strand="+" ref_description="SGN-E459694 [cPRO-28-L15]">
      <seq>tttctttcttgttcttgctttgttcttgttctatagatacccatctttttcttctatggctgaaggatcaccaaaatccatttatgatttcactgtcaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttcttcttattgtcaatgttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatgttttgtatgagaagtacaaagatcaaggttttgaaattttagcatttccttgtaaccagtttctggggcaagagcccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctacacctctgtacaagttcttaaaatcagaaaaaggtggtttccttggaaatgctgtcaaatggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacatacaaaatctgttgggtgtggcttgagtacaacaggtgttgtgagagttcagcatatgtattgacctttagntggaaagtgcttcatggttctatctttttccttcntcccctgctacgaaaacagcgagcttgtaccctacccccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55301" stop="59594"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55601" g_stop="55700" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="100" r_length="100" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="0.92"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="177" r_length="77" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="239" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="358" r_length="119" r_score="0.975"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="526" r_length="168" r_score="0.958"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.81"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59145" g_stop="59295" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="680" r_length="154" r_score="0.848"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E459694" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>677</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E459694" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55601" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59295"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTTCTTGTTCTTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACA-G-G-TGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGG-AAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCT</genome_strand>
        <mrna_strand>TTTCTTTCTTGTTCTTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTTCTATGGCTGAAGGATCACCAAAATCCATTTATGATTTCACTGTCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTTCTTATTGTCAATGTTGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTCAAACTACAAGGAGCTGAATGTTTTGTATGAGAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTTCTGGGGCAAGAGCCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTACACCTCTGTACAAGTTCTTAAAATCAGAAAAAGGTGGTTTCCTTGGAAATGCTGTCAAATGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATACAAAATCTGTTGGGTGTGGCTTGAGTACAACAGGTGTTGTGAGAGTTCAGCATATGTATTGACCTTTAGNTGGAAAGTGC-TTCATGGTTCTATCTTTTTCCTTCNTCCCCTGCTACGAAAACAGCGAGCTTGTACCCTACCCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E465734" ref_strand="+" ref_description="SGN-E465734 [cPRO-22-G15]">
      <seq>ctttcttgttcttgctttgttcttgttctatagatacccatctttttcttctatggctgaaggatcaccaaaatccatttatgatttcactgtcaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttcttcttattgtcaatgttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatgttttgtatgagaagtacaaagatcaaggttttgaaattttagcatttccttgtaaccagtttctggggcaagagcccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctacacctctgtacaagttcttaaaatcagaaaaaggtggtttccttggaaatgctgtcaaatggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacatacaaaatctgttgggtgtggcttgagtacaacaggtgttgtgagagttcagcatatgtattgacctttagttggaagtgctttcatggttctatctttttccttcttccctgcctacgaaacaagcgagcttgtaccctacccccttagttgtttttttccttgntgatgtactttggttgtgtaatctcgttcattaccatgaatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55304" stop="59627"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55604" g_stop="55700" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="97" r_length="97" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="0.92"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="174" r_length="77" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="236" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="355" r_length="119" r_score="0.975"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="523" r_length="168" r_score="0.958"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.81"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59145" g_stop="59353" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="524" r_stop="740" r_length="217" r_score="0.880"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E465734" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>732</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E465734" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55604" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59353"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTCTTGTTCTTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACA-G-G-TGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTA---G--TTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTG</genome_strand>
        <mrna_strand>CTTTCTTGTTCTTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTTCTATGGCTGAAGGATCACCAAAATCCATTTATGATTTCACTGTCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTTCTTATTGTCAATGTTGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTCAAACTACAAGGAGCTGAATGTTTTGTATGAGAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTTCTGGGGCAAGAGCCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTACACCTCTGTACAAGTTCTTAAAATCAGAAAAAGGTGGTTTCCTTGGAAATGCTGTCAAATGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATACAAAATCTGTTGGGTGTGGCTTGAGTACAACAGGTGTTGTGAGAGTTCAGCATATGTATTGACCTTTAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCTACCCCCTTAGTTGTTTTTTTCCTTGNTGATGTACTTTGGTTGTGTAATCTCGTTCATTACCATGAATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E201450" ref_strand="+" ref_description="SGN-E201450 [cLEC-4-I11]">
      <seq>ttgctttgaggttgttctatagatacccatctttttctcttatggctgaaggatcaccaaaatctatttatgatttcactgtgaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttctccttattgtcaatgttgcatcacaatgtggtttaacagattgaaactacagggagctgaatattttgtatgagaagtctcaaaaaacaaggttgtgaaattttagcatttccttgtaacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55326" stop="58165"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55615" g_stop="55700" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="163" r_length="77" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="226" r_length="63" r_score="0.887"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="0.86"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57835" g_stop="57865" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="257" r_length="31" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E201450" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>256</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E201450" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55615" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57865"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGT-ACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCA</genome_strand>
        <mrna_strand>TTGCTTTGAGGTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCACAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTGAAACTACAGGGAGCTGAATATTTTGTATGAGAAGTCTCAAAAAACAAG..................................................................................................GTTGTGAAATTTTAGCATTTCCTTGTAACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E335862" ref_strand="+" ref_description="SGN-E335862 [cTOE-6-P15]">
      <seq>tttgttcttgttctatagatacccatctttttctcttatggctgaaggatcaccaaaatctatttatgatttcactgtgaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttctccttattgtcaatgttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatattttgtatgagaagtacaaagatcaaggttttgaaattttagcatttccttgtaaccagttcctgtggcaagaacccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggngataatgctgcaccactttacaagttcttgaaatcagaaaaaggcggtttccttggaagtgctgtcaagtggaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55319" stop="59127"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55619" g_stop="55700" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="82" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="83" r_stop="159" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="221" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="340" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58738" g_stop="58827" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="430" r_length="90" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E335862" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>430</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E335862" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55619" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58827"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAAC</genome_strand>
        <mrna_strand>TTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGNGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E338284" ref_strand="+" ref_description="SGN-E338284 [cTOE-13-B1]">
      <seq>ttcttgttctatagatacccatctttttctcttatggctgaaggatcaccaaaatctatttatgatttcactgtgaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttctccttattgtcaatgttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatattttgtatgagaagtacaaagatcaaggttttgaaattttagcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55323" stop="58153"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55623" g_stop="55700" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="155" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="217" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57835" g_stop="57853" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="236" r_length="19" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E338284" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>236</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E338284" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55623" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57853"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATT</genome_strand>
        <mrna_strand>TTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E405513" ref_strand="+" ref_description="SGN-E405513 [PPC-18-D9]">
      <seq>ggttctatagatacccatctttttcttctatggctgaaggatcaccaaaatccatttatgatttcactgtcaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttcttcttattgtcaatgttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatgttttgtatgagaagtacaaagatcaaggttttgaaattttagcatttccttgtaaccagtttctggggcaagagcccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctacacctctgtacaagttcttaaaatcagaaaaaggtggtttccttggaaatgctgtcaaatggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacatacaaaatctgttgggtgtggcttgagtacaacaggtgttgtgagagttcagcatatgtattgacctttagttggaagtgctttcatggttctatctttttccttcttccctgcctacgaaacaagcgagcttgtaccctacccccttagttgtttttttccttgttgatgtactttggttgtgtaatctcgttcattaccatgaatttgtaaaaataaaagttgcatagtagttgtttcaatgactcgtaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55328" stop="59694"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55627" g_stop="55700" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="0.932"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="0.92"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="151" r_length="77" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="213" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="332" r_length="119" r_score="0.975"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="500" r_length="168" r_score="0.958"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.81"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59145" g_stop="59394" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="501" r_stop="761" r_length="261" r_score="0.868"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E405513" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>750</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E405513" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55627" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59394"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACA-G-G-TGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTA---G--TTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGT---AATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACT</genome_strand>
        <mrna_strand>GGTTCTATAGATACCCATCTTTTTCTTCTATGGCTGAAGGATCACCAAAATCCATTTATGATTTCACTGTCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTTCTTATTGTCAATGTTGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTCAAACTACAAGGAGCTGAATGTTTTGTATGAGAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTTCTGGGGCAAGAGCCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTACACCTCTGTACAAGTTCTTAAAATCAGAAAAAGGTGGTTTCCTTGGAAATGCTGTCAAATGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATACAAAATCTGTTGGGTGTGGCTTGAGTACAACAGGTGTTGTGAGAGTTCAGCATATGTATTGACCTTTAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCTACCCCCTTAGTTGTTTTTTTCCTTGTTGATGTACTTTGGTTGTGTAATCTCGTTCATTACCATGAATTTGTAAAAATAAAAGTTGCATAGTAGTTGTTTCAATGACTCGTAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E370292" ref_strand="+" ref_description="SGN-E370292 [TUS-28-E11]">
      <seq>agatacccatctttttctcttatggctgaaggatcaccaaaatctatttatgatttcactgtgaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttctccttattgtcaatgttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatattttgtatgagaagtacaaagatcaaggttttgaaattttagcatttccttgtaaccagttcctgtggcaagaacccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcagaaaaaggcggtttccttggaagtgctgtcaagtggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacataaaaaatctgttgggtgtggcttgagcactacaggtgtgaaagttcagcatatgtattgaccttcagttggaagtgctttcatggttctatctttttccttcttccctgcctacgaaacaagcgagcttgtaccccacccccttagtttttccttgntgatgtactttggttgtgtaaactcgttcattgccatgaatttgtaataaaagttgcatagtagtttgtttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55335" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55635" g_stop="55700" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="143" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="205" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="324" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="492" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59145" g_stop="59382" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="493" r_stop="730" r_length="238" r_score="0.987"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="59383" i_stop="60128" i_length="746">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="60129" g_stop="60167" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="731" r_stop="769" r_length="39" r_score="0.615"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E370292" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>769</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E370292" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55635" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59382"/>
          <exon e_start="60129" e_stop="60167"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAGGATGTCTTGCGTAGGTAAACTGATTATTGTTGGTGCTATGAACGATGATATTCGTTGTTCTACGAAATATGATGACTCTCATTGCTCTAGAAATGAGGTTGAGTTTTTTGCTGCTTAATGAGAACAATTTCTTAAAATGTGTTTCAAGATTTTCAAGTACTGAGGAATGTTCATTTGCCACTCCACGCAAAGATAGGGTGATTTGCTACGTTTTTTAATTTTATGGCTTTAAATTAAAGATACGCATAACGAACTACTTTATTTTGTGGCCATATGTCACATGGAAGAACTACAGTACACTAAGCTTTGACTATTCGGGAGAAAGATTGTGTGCTATTGTGCAAGAAATTTTTTTACCGTCAAATCTTAAACACACGACAACAACTAACAACTGTTTTTACAAAGTTCTATTAGAGATTTGATTCCTTCACAGAATTACCAATTAACCACAACTTGCAAGGATATCTTAGAATATGCTTCATTTTTTTTTATCCTTTGGAGTAAAAAGACTTTCGGTTAAAAGTTTCAAAGATACTGTTGGAACATTATCGAAACGTATCTGACATGTAAGTAGATTGATTGATAAACGCGATTGAGTTCTGTTACTCAAAAAGAGAACATATAACAAGGAAGAAACTTGATTTATTAATAACCAAGAACAGTATTTTGATCAGCATTACATAAGAAAACAAAATTAAAACATGAAGAAGAAT</genome_strand>
        <mrna_strand>AGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGNTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTTGTTTAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E270713" ref_strand="+" ref_description="SGN-E270713 [cLEM-6-H13]">
      <seq>agatacccatctttttctcttatggctgaaggatcaccaaaatctatttatgatttcactgtgaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttctccttattgtcaatgttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatattttgtatgagaagtacaaagatcaaggttttgaaattttagcatttccttgtaaccagttcctgtggcaagaacccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcagaaaaaggcggtttccttggaagtgctgtcaagtggaacttcaccaaattccttgtggacaaagaaagaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacataaaaaatctgttgggtgtggcttgagcacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55335" stop="59483"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55635" g_stop="55700" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="143" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="205" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="324" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="492" r_length="168" r_score="0.994"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59145" g_stop="59183" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="493" r_stop="531" r_length="39" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E270713" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E270713" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55635" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59183"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTA</genome_strand>
        <mrna_strand>AGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAAGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E715095" ref_strand="+" ref_description="SGN-E715095 [FB13BC07]">
      <seq>acccctctttttctctgatggctgaatgatcaccaaaatctatttatgatttcactgcgcaacgatatacagggcaaatgcatcgtacctttgaccaattatacgggaaagggtctccttattgtcaatgtcgcatcaaaatgtgctttaacagattcaaactaaaaggagctgaatatttatgtatgagaactacaaagatccaggactttgaaattttaccatttccttgaaacgcagatcctgtggcaagaacccgaaacacatgacgacattcagccaactgaatgcaccaggatctaagctgaattccctgtatttcaaaacattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcataaaaaagccgcttccttgtaagtgctgtcaagagtaacttcaccaaattccttgtggacaaacaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagattgagaaagacataaaaaatctgttgggtgtggcttgagctctacaggtgtgaaagttcagcatatgtattgaccttcagttggaagtgctttcatggttctatctttttcctacttccctgcctacgaaacaagcgagcttgtaccccacccccttagtttttccttgttgatgtactttggttgtgtaaactcgttcattgccatgaatttgtaataaaagttgcatagtagttgttttaatgactcgggactgtagttgctcgatatacaagtatgttatcgccttaataataagaaataagttgtgtgcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55339" stop="59753"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55639" g_stop="55700" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="0.887"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="0.88"/>
            <acceptor a_prob="0.942" a_score="0.79"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="143" r_length="80" r_score="0.857"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="0.92"/>
            <acceptor a_prob="0.991" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="206" r_length="63" r_score="0.903"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57833" i_length="97">
            <donor d_prob="0.764" d_score="0.90"/>
            <acceptor a_prob="0.000" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57834" g_stop="57953" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="327" r_length="121" r_score="0.858"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="0.88"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="495" r_length="168" r_score="0.946"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59145" g_stop="59455" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="806" r_length="311" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E715095" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>800</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E715095" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55639" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57834" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59455"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTG-AAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGG-AAATG-A-GGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTT-TGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAAC-CAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAGG</genome_strand>
        <mrna_strand>ACCCCTCTTTTTCTCTGATGGCTGAATGATCACCAAAATCTATTTATGATTTCACTGCGCAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGCAAATGCATCGTACCTTTGACCAATTATACGGGAAAGGGTCTCCTTATTGTCAATGTCGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTTTAACAGATTCAAACTAAAAGGAGCTGAATATTTATGTATGAGAACTACAAAGATCCAG.................................................................................................GACTTTGAAATTTTACCATTTCCTTGAAACGCAGATCCTGTGGCAAGAACCCGAAACACATGACGACATTCAGCCAACTGAATGCACCAGGATCTAAGCTGAATTCCCTGTATTTCAAAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCATAAAAAAGCCGCTTCCTTGTAAGTGCTGTCAAGAGTAACTTCACCAAATTCCTTGTGGACAAACAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGATTGAG...............................................................................................................................................................................................................................................AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCTCTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTACTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355005" ref_strand="+" ref_description="SGN-E355005 [cTOS-19-L21]">
      <seq>ttttctcttatggctgaaggatcaccaaaatctatttatgatttcactgtgaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttctccttattgtcaatgttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatattttgtatgagaagtacaaagatcaaggttttgaaattttagcatttccttgtaaccagttcctgtggcaagaacccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcagaaaaaggcggtttccttggaagtgctgtcaagtggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacataaaaaatctgttgggtgtggcttgagcactacaggtgtgaaagttcagcatatgtattgaccttcagttggaagtgctttcatgggtctatctttttccttcttccctgcctacgaaaacagcgagcttgtaccccacccccttagtttttccttggtgatgtactttgggtgtgtaaactcgttcattgccatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55347" stop="59647"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55647" g_stop="55700" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="131" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="193" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="312" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="480" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59145" g_stop="59347" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="481" r_stop="683" r_length="203" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E355005" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>683</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355005" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55647" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59347"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATG</genome_strand>
        <mrna_strand>TTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGGTCTATCTTTTTCCTTCTTCCCTGCCTACGAAAACAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGGTGATGTACTTTGGGTGTGTAAACTCGTTCATTGCCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E429485" ref_strand="-" ref_description="SGN-E429485 [STM-52-K13]">
      <seq>ccaaaatccatttatgatttcactgtcaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttcttcttattgtcaatgttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatgttttgtatgagaagtacaaagatcaaggttttgaaattttagcatttccttgtaaccagtttctggggcaagagcccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctacacctctgtacaagttcttaaaatcagaaaaaggtggtttccttggaaatgctgtcaaatggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacatacaaaatctgttgggtgtggcttgagtacaacaggtgttgtgagagttcagcatatgtattgacctttagttggaagtgctttcatggttctatctttttccttcttccctgcctacgaaacaagcgagcttgtaccctacccccttagttgtttttttccttgttgatgtactttggttgtgtaatctcgttcattaccatgaatttgtaaaaataaaagttgcatagtagttgtttcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55371" stop="59682"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55671" g_stop="55700" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="0.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="107" r_length="77" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="169" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="288" r_length="119" r_score="0.975"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="456" r_length="168" r_score="0.958"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.81"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59145" g_stop="59391" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="714" r_length="258" r_score="0.842"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E429485" ref_strand="-">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E429485" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="55671" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59391"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAAATCTATTTATGATTTCACTGTGAAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACA-G-G-TGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTA---G--TTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGT---AATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGG</genome_strand>
        <mrna_strand>CCAAAATCCATTTATGATTTCACTGTCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTTCTTATTGTCAATGTTGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTCAAACTACAAGGAGCTGAATGTTTTGTATGAGAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTTCTGGGGCAAGAGCCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTACACCTCTGTACAAGTTCTTAAAATCAGAAAAAGGTGGTTTCCTTGGAAATGCTGTCAAATGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATACAAAATCTGTTGGGTGTGGCTTGAGTACAACAGGTGTTGTGAGAGTTCAGCATATGTATTGACCTTTAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCTACCCCCTTAGTTGTTTTTTTCCTTGTTGATGTACTTTGGTTGTGTAATCTCGTTCATTACCATGAATTTGTAAAAATAAAAGTTGCATAGTAGTTGTTTCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E429484" ref_strand="+" ref_description="SGN-E429484 [STM-52-K13]">
      <seq>ccaaaatccatttatgatttcactgtcaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttcttcttattgtcaatgttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatgttttgtatgagaagtacaaagatcaaggttttgaaattttagcatttccttgtaaccagtttctggggcaagagcccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctacacctctgtacaagttcttaaaatcagaaaaaggtggtttccttggaaatgctgtcaaatggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacatacaaaatctgttgggtgtggcttgagtacaacaggtgttgtgagagttcagcatatgtattgacctttagttggaagtgctttcatggttctatctttttccttcttccctgcctacgaaacaagcgagcttgtaccctacccccttagttgtttttttccttgttgatgtactttggttgtgtaatctcgttcattaccatgaatttgtaaaaataaagttgcatagtagttgtttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55371" stop="59682"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55671" g_stop="55700" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="0.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="107" r_length="77" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="169" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="288" r_length="119" r_score="0.975"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="456" r_length="168" r_score="0.958"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.81"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59145" g_stop="59390" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="712" r_length="256" r_score="0.850"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E429484" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>702</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E429484" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55671" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59390"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAAATCTATTTATGATTTCACTGTGAAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACA-G-G-TGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTA---G--TTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGT-AATA-AAAGTTGCATAGTAGTTGTTTTAATGACTCGG</genome_strand>
        <mrna_strand>CCAAAATCCATTTATGATTTCACTGTCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTTCTTATTGTCAATGTTGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTCAAACTACAAGGAGCTGAATGTTTTGTATGAGAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTTCTGGGGCAAGAGCCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTACACCTCTGTACAAGTTCTTAAAATCAGAAAAAGGTGGTTTCCTTGGAAATGCTGTCAAATGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATACAAAATCTGTTGGGTGTGGCTTGAGTACAACAGGTGTTGTGAGAGTTCAGCATATGTATTGACCTTTAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCTACCCCCTTAGTTGTTTTTTTCCTTGTTGATGTACTTTGGTTGTGTAATCTCGTTCATTACCATGAATTTGTAAAAATAAAGTTGCATAGTAGTTGTTTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E457363" ref_strand="+" ref_description="SGN-E457363 [cPRO-2-D1]">
      <seq>ccaaaatccatttatgatttcactgtcaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttcttcttattgtcaatgttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatgttttgtatgagaagtacaaagatcaaggttttgaaattttagcatttccttgtaaccagtttctggggcaagagcccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctacacctctgtacaagttcttaaaatcagaaaaaggtggtttccttggaaatgctgtcaaatggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacatacaaaatctgttgggtgtggcttgagtacaacangtgttgtgagagttcagcatatgtattgacctttagttggaagtgctttcatggntctatctttttccttcttccctgcctacgaaacaagcgagcttgtaccctacccccttagttgtttttttccttgttgatgtactttggttgtgtaatctcgttcattaccatgaaattgtaaaaataaaagttgcatagtagnttgtttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55371" stop="59682"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55671" g_stop="55700" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="0.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="107" r_length="77" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="169" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="288" r_length="119" r_score="0.975"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="456" r_length="168" r_score="0.958"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.81"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59145" g_stop="59361" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="681" r_length="225" r_score="0.871"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="705" polyA_stop="714"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E457363" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>673</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E457363" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55671" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59361"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAAATCTATTTATGATTTCACTGTGAAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACA-G-G-TGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTA---G--TTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAA</genome_strand>
        <mrna_strand>CCAAAATCCATTTATGATTTCACTGTCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTTCTTATTGTCAATGTTGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTCAAACTACAAGGAGCTGAATGTTTTGTATGAGAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTTCTGGGGCAAGAGCCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTACACCTCTGTACAAGTTCTTAAAATCAGAAAAAGGTGGTTTCCTTGGAAATGCTGTCAAATGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATACAAAATCTGTTGGGTGTGGCTTGAGTACAACANGTGTTGTGAGAGTTCAGCATATGTATTGACCTTTAGTTGGAAGTGCTTTCATGGNTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCTACCCCCTTAGTTGTTTTTTTCCTTGTTGATGTACTTTGGTTGTGTAATCTCGTTCATTACCATGAAATTGTAAAAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E370291" ref_strand="+" ref_description="SGN-E370291 [TUS-28-E11](-)">
      <seq>caaaatctatttatgatttcactgtgaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttttccttattgtcaatgttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatattttgtatgagaagtacaaagatcaaggttttgaaattttagcatttccttgtaaccagttcctgtggcaagaacccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaaactgaattccctgtatttgaaaaaattgatgtgaacggggataatgctgcacccctttacaagtttttgaaatcaaaaaaaggcggtttccttggaagtgctgtcaagtggaacttcaccaaattccttgtggacaaaaaaggaaaggttgtggaacgatatgcacccaaaacaccaccttttcagtttgaaaaaaacataaaaaatttgttgggtgtggcttgagcactacaggtgtgaaagttcagcatatgtattgaccttcagttggaagtgctttcatggttttatttttttcctttttccctgcctacgaaacaaacgagcttgtaccccccccccttagtttttccttgttgatgtactttggttgtgtaaactcgttcattgccatgaatttgtaataaaagttgcatagtagttgttttttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55372" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55672" g_stop="55700" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="29" r_length="29" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="0.00"/>
            <acceptor a_prob="0.942" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="106" r_length="77" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="107" r_stop="168" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="287" r_length="119" r_score="0.983"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="455" r_length="168" r_score="0.958"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59145" g_stop="59380" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="691" r_length="236" r_score="0.970"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="59381" i_stop="60130" i_length="750">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="60131" g_stop="60164" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="692" r_stop="725" r_length="34" r_score="0.676"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E370291" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>725</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E370291" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55672" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59380"/>
          <exon e_start="60131" e_stop="60164"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCTATTTATGATTTCACTGTGAAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAGGATGTCTTGCGTAGGTAAACTGATTATTGTTGGTGCTATGAACGATGATATTCGTTGTTCTACGAAATATGATGACTCTCATTGCTCTAGAAATGAGGTTGAGTTTTTTGCTGCTTAATGAGAACAATTTCTTAAAATGTGTTTCAAGATTTTCAAGTACTGAGGAATGTTCATTTGCCACTCCACGCAAAGATAGGGTGATTTGCTACGTTTTTTAATTTTATGGCTTTAAATTAAAGATACGCATAACGAACTACTTTATTTTGTGGCCATATGTCACATGGAAGAACTACAGTACACTAAGCTTTGACTATTCGGGAGAAAGATTGTGTGCTATTGTGCAAGAAATTTTTTTACCGTCAAATCTTAAACACACGACAACAACTAACAACTGTTTTTACAAAGTTCTATTAGAGATTTGATTCCTTCACAGAATTACCAATTAACCACAACTTGCAAGGATATCTTAGAATATGCTTCATTTTTTTTTATCCTTTGGAGTAAAAAGACTTTCGGTTAAAAGTTTCAAAGATACTGTTGGAACATTATCGAAACGTATCTGACATGTAAGTAGATTGATTGATAAACGCGATTGAGTTCTGTTACTCAAAAAGAGAACATATAACAAGGAAGAAACTTGATTTATTAATAACCAAGAACAGTATTTTGATCAGCATTACATAAGAAAACAAAATTAAAACATGAAGAAG</genome_strand>
        <mrna_strand>CAAAATCTATTTATGATTTCACTGTGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTTTCCTTATTGTCAATGTTGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAACTGAATTCCCTGTATTTGAAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCCCTTTACAAGTTTTTGAAATCAAAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAAAAGGAAAGGTTGTGGAACGATATGCACCCAAAACACCACCTTTTCAGTTTGAA...............................................................................................................................................................................................................................................AAAAACATAAAAAATTTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTTTATTTTTTTCCTTTTTCCCTGCCTACGAAACAAACGAGCTTGTACCCCCCCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E350578" ref_strand="+" ref_description="SGN-E350578 [cTOS-5-L17]">
      <seq>aaaatctatttatgatttcactgtgaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttctccttattgtcaatgttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatattttgtatgagaagtacaaagatcaaggttttgaaattttagcatttccttgtaaccagttcctgtggcaagaacccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcagaaaaaggcggtttccttggaagtgctgtcaagtggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacataaaaaatctgttgggtgtggcttgagcactacaggtgtgaaagttcagcatatgtattgaccttcagttggaagtgctttcatggttctatctttttccttcttccctgcctacgaaacaagcgagcttgtaccccacccccttagtttttccttgttgatgtactttggttgtgtaaactcgttcattgccatgaatttgtaataaaagttgcatagtagttgttttaatgactcgggactgtagttgctcgatatacaagtatgttatcgcctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55373" stop="59729"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55673" g_stop="55700" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="28" r_length="28" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="0.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="105" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="167" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="286" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="454" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59145" g_stop="59429" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="739" r_length="285" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E350578" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>739</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E350578" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55673" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59429"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCTATTTATGATTTCACTGTGAAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTA</genome_strand>
        <mrna_strand>AAAATCTATTTATGATTTCACTGTGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E351639" ref_strand="+" ref_description="SGN-E351639 [cTOS-8-C21]">
      <seq>aaaatctatttatgatttcactgtgaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttctccttattgtcaatgttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatattttgtatgagaagtacaaagatcaaggttttgaaattttagcatttccttgtaaccagttcctgtggcaagaacccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcagaaaaaggcggtttccttggaagtgctgtcaagtggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacataaaaaatctgttgggtgtggcttgagcactacaggtgtgaaagttcagcatatgtattgaccttcagttggaagtgctttcatggntctatctttttccttcttccctgcctacgaaacaagcgagcttgtaccccacccccttagtttttccttggtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55373" stop="59611"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55673" g_stop="55700" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="28" r_length="28" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="0.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="105" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="167" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="286" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="454" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59145" g_stop="59311" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="621" r_length="167" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E351639" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>621</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351639" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55673" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59311"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCTATTTATGATTTCACTGTGAAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTG</genome_strand>
        <mrna_strand>AAAATCTATTTATGATTTCACTGTGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGNTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E550795" ref_strand="+" ref_description="SGN-E550795 [TUS-50-L20]">
      <seq>atttaagcttgctaacgagattgaaaatgcaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttctccttattgtcaatgttgcatcaaaatggtaagtgaagtaatctagtttctgtcttggctttttccttggttttcatttagaagtgtctccactgcttcactaattagacttatgagttatataagtgtgactaaggtctagttacttctggagagtgtatactatgtcaaatattgtgctactgggtgcatttaagttttattgtacaatgatgatgtcaattgccacaaactagatgtactcgtttagggatgaatttctgttattctgattagtatgtctttgcatgtttttggtagatggaaaattccttaaaaggtttctttttattttaatttacgacacgttgatcctcctgcattattttctgggattccctgactaaagaagttgctagcaggttctttgaacttacttaacttataattatttatttttgcaaagaatgcaataacgaaaatttgagattagtgttcacatagttttgaactgtcttagatgttgatgttgattgatgatgatatattatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="56493" stop="57704"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56793" g_stop="57405" g_length="613"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="613" r_length="613" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E550795" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E550795" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56793" e_stop="57405"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAA</genome_strand>
        <mrna_strand>ATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E688504" ref_strand="+" ref_description="SGN-E688504 [t3_tus_50_l20]">
      <seq>atttaagcttgctaacgagattgaaaatgcaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttctccttattgtcaatgttgcatcaaaatggtaagtgaagtaatctagtttctgtcttggctttttccttggttttcatttagaagtgtctccactgcttcactaattagacttatgagttatataagtgtgactaaggtctagttacttctggagagtgtatactatgtcaaatattgtgctactgggtgcatttaagttttattgtacaatgatgatgtcaattgccacaaactagatgtactcgtttagggatgaatttctgttattctgattagtatgtctttgcatgtttttggtagatggaaaattccttaaaaggtttctttttattttaatttacgacacgttgatcctcctgcattattttctgggattccctgactaaagaagttgctagcaggttctttgaacttacttaacttataattatttatttttgcaaagaatgcaataacgaaaatttgagattagtgttcacatagttttgaactgtcttagatgttgatgttgattgatgatgatatattatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="56493" stop="57704"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56793" g_stop="57405" g_length="613"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="613" r_length="613" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E688504" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E688504" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56793" e_stop="57405"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAA</genome_strand>
        <mrna_strand>ATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E606082" ref_strand="-" ref_description="SGN-E606082 [22017]">
      <seq>tcntatgnctgaaggatctccaaaatccatttatgattttactgttaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttcttcttattgtcaatgttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatgttttgtatgagaagtacaaagatcaaggttttgaaattttagcatttccttgtaaccagtttctgtggcaagagcccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctgcaccactttacaagttcttaaaatcagaaaaaggtggtttccttggaaatgctgtcaaatggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacatacaaaatctgttgggtgtggcttgagctcaacaggtgtgagagttcagcatatgtattgatgacctttagttggaagtgctttcatggttctatctttttccttcttccctgctacgaaacaagcgagcttgtaccccacccccttagtttttttttttcccttgttgatgtactttggttgtgtaaactcgttcattaccatgaatttgtaaaaataaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="56523" stop="59661"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="126" r_length="77" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="188" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="307" r_length="119" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="475" r_length="168" r_score="0.976"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="59145" g_stop="59365" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="705" r_length="230" r_score="0.855"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E606082" ref_strand="-">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="0.918" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E606082" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59365"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTA-T--TGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAG------TTTTT-CCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTG</genome_strand>
        <mrna_strand>GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTTCTTATTGTCAATGTTGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTCAAACTACAAGGAGCTGAATGTTTTGTATGAGAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTTCTGTGGCAAGAGCCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTAAAATCAGAAAAAGGTGGTTTCCTTGGAAATGCTGTCAAATGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATACAAAATCTGTTGGGTGTGGCTTGAGCTCAACAGGTGTGAGAGTTCAGCATATGTATTGATGACCTTTAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTG-CTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTTTTTTTCCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTACCATGAATTTGTAAAAATAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E717047" ref_strand="+" ref_description="SGN-E717047 [FB18DB05]">
      <seq>ccttattgtcaatgttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatattttgtatgagaagtacaaagatcaaggttttgaaattttagcatttccttgtaaccagttcctgtggcaagaacccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcagaaaaaggcggtttccttggaagtgctgtcaagtggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacataaaaaatctgttgggtgtggcttgagcactacaggtgtgaaagttcagcatatgtattgaccttcagttggaagtgctttcatggttctatctttttccttcttccctgcctacgaaacaagcgagcttgtaccccacccccttagtttttccttgttgatgtactttggttgtgtaaactcgttcattgccatgaatttgtaataaaagttgcatagtagttgttttannaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaanccctggggggggggcggggacccatttccccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="56575" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56875" g_stop="56901" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="0.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="89" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="208" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="376" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="59145" g_stop="59381" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="613" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="59382" i_stop="60336" i_length="955">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="60337" g_stop="60348" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="614" r_stop="625" r_length="12" r_score="0.417"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="60349" i_stop="60506" i_length="158">
            <donor d_prob="0.893" d_score="0.00"/>
            <acceptor a_prob="0.700" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="60507" g_stop="60523" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="626" r_stop="642" r_length="17" r_score="0.412"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="60524" i_stop="60875" i_length="352">
            <donor d_prob="0.265" d_score="0.00"/>
            <acceptor a_prob="0.930" a_score="0.55"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="60876" g_stop="60915" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="643" r_stop="682" r_length="40" r_score="0.550"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E717047" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>682</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E717047" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56875" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59381"/>
          <exon e_start="60337" e_stop="60348"/>
          <exon e_start="60507" e_stop="60523"/>
          <exon e_start="60876" e_stop="60915"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAGGATGTCTTGCGTAGGTAAACTGATTATTGTTGGTGCTATGAACGATGATATTCGTTGTTCTACGAAATATGATGACTCTCATTGCTCTAGAAATGAGGTTGAGTTTTTTGCTGCTTAATGAGAACAATTTCTTAAAATGTGTTTCAAGATTTTCAAGTACTGAGGAATGTTCATTTGCCACTCCACGCAAAGATAGGGTGATTTGCTACGTTTTTTAATTTTATGGCTTTAAATTAAAGATACGCATAACGAACTACTTTATTTTGTGGCCATATGTCACATGGAAGAACTACAGTACACTAAGCTTTGACTATTCGGGAGAAAGATTGTGTGCTATTGTGCAAGAAATTTTTTTACCGTCAAATCTTAAACACACGACAACAACTAACAACTGTTTTTACAAAGTTCTATTAGAGATTTGATTCCTTCACAGAATTACCAATTAACCACAACTTGCAAGGATATCTTAGAATATGCTTCATTTTTTTTTATCCTTTGGAGTAAAAAGACTTTCGGTTAAAAGTTTCAAAGATACTGTTGGAACATTATCGAAACGTATCTGACATGTAAGTAGATTGATTGATAAACGCGATTGAGTTCTGTTACTCAAAAAGAGAACATATAACAAGGAAGAAACTTGATTTATTAATAACCAAGAACAGTATTTTGATCAGCATTACATAAGAAAACAAAATTAAAACATGAAGAAGAATTGCAATCTTGGGACTAAAACTGATACACAAAGTTATATCGATTTTAGTCCATGTGTTGGTTAATCTTTTAGCCCTGAAACATCTCTTCCTTCCTCTTCATCTACTTTGGGATTTTGATTAAACTTTGCCTACCCATCATGGACATGATTCTTTTTGAATCTATCTTCAGGTAAAGCATGAGGTACCTTCTTCTTGGCCTTGTGGCCATAGCCTTTTTTTTTTCAGGATCCAGGCAAAGAGACCACAGCACAAGTACTCTTTCATATGAAGAAAAGATCATTTCATTTCCCCTCTCATCTTGCATTAAGCTTTTCTTGGCTTCCATTTTTCCCTTTTTAGTTACATAATTTAACAGTGCATGCCACAGCTTGAGCCCAGTATTTCAGCCTTGCTTTCACATCTTCAGGATCATCACCTGAGGTATTACAAAATGTATCAACATTAGTGACAATTGAGCAACAAATTGAAGATTTTTCATCATCTTCACCTTCCCAACCAACAAAAAACAAGAAACACATAACAAAAAGATCCCTTTTTTTTTTTTCATTTTCTCCTTTTGGGGTATAGTCTTTTGTAACACAAAAGCATAAAAGTTAAGGAACAAAGAGTTTATAACTCCAAAGACTCCACCTTTACTACATAAAAATGAAAGCTTTTTAACAAGAATCTAACTAGAAAAACAAGATTTTTCACAAACCCTTGTTACAGATACAAAACCCTAGAGAGAGGGGGGAAAAAAAGACTCACC</genome_strand>
        <mrna_strand>CCTTATTGTCAATGTTGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................NNAAAAAAAAAA..............................................................................................................................................................AAAAAAAAAAAAAAAAA................................................................................................................................................................................................................................................................................................................................................................AAAAAAANCCCTGGGGGGGGGGCGGGGACCCATTTCCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E351700" ref_strand="+" ref_description="SGN-E351700 [cTOS-8-K14]">
      <seq>ttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatattttgtatgagaagtacaaagatcaaggttttgaaattttagcatttccttgtaaccagttcctgtggcaagaacccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcagaaaaaggcggtttccttggaagtgctgtcaagtggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacataaaaaatctgttgggtgtggcttgagcactacaggtgtgaaagttcagcatatgtattgaccttcagttggaagtgctttcatgggtctatctttttccttcttccctgcctacgaaacagcgagcttgtaccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57374" stop="59587"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="75" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="194" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="362" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="59145" g_stop="59287" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="504" r_length="142" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E351700" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351700" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59287"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCC</genome_strand>
        <mrna_strand>TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGGTCTATCTTTTTCCTTCTTCCCTGCCTACGAAAC-AGCGAGCTTGTACCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E354827" ref_strand="-" ref_description="SGN-E354827 [cTOS-19-D11]">
      <seq>gagaagtacaaagatcaaggttgtgaaattttagcatttccttgtaaccagttcctgtggcaagaacccggaacaaatgaggagattcagcaacctgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcagaaaaaggcggtttccttggaagtgctgtcaagtggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacttcttcagtttgagaaagacataaaaaatctgttgggtgtggcttgagcactacaggtgtgaaagttcagcatatgtattgaccttcagttggaagtgctttcatggttctatctttttccttcttccctgcctacgaaacaagcgagcttgtaccccacccccttagtttttccttgttgatgtactttggttgtgtaaactcgttcattgccatgaatttgtaataaaagttgcatagtagttgttttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57418" stop="59682"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57718" g_stop="57736" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="19" r_length="19" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="138" r_length="119" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="306" r_length="168" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="59145" g_stop="59391" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="553" r_length="247" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E354827" ref_strand="-">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354827" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="57718" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59391"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGG</genome_strand>
        <mrna_strand>GAGAAGTACAAAGATCAAG..................................................................................................GTTGTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAACCTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACTTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355021" ref_strand="-" ref_description="SGN-E355021 [cTOS-19-D12]">
      <seq>agaacccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcagaaaaaggcggtttctttggaagtgctgtcaagtggaacttcaccaaattcctttggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacgtcttcagtttgagaaagacataaaaaatctgttgggtgtggcttgagcactacaggtgtgaaagttcagcatatgtattgaccttcagttggaagtgctttcatggttctatctttttccttcttccctgcctacgaaacaagcgagcttgtaccccacccccttagtttttccttgttgatgtactttggttgtgtaaaatcgttcattgccatgaatttgtaataaaagttgcatagtagttgttttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57578" stop="59682"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57878" g_stop="57953" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="243" r_length="167" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59145" g_stop="59391" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="244" r_stop="490" r_length="247" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E355021" ref_strand="-">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355021" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="57878" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59391"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGG</genome_strand>
        <mrna_strand>AGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCTTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTT-TGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACGTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAAATCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E239498" ref_strand="+" ref_description="SGN-E239498 [cLED-23-F8]">
      <seq>cccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcagaaaaaggcggtttccttggaagtgctgtcaagtggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacataaaaaatctgttgggtgtggcttgagcactacaggtgtgaaagttcagcatatgtattgaccttcagttggaagtgctttcatgggtctatctttttccttcttccctgcctacgaaacaagcgagcttgtaccccaccccctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57582" stop="59597"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57882" g_stop="57953" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="72" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="73" r_stop="240" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59145" g_stop="59297" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="241" r_stop="393" r_length="153" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E239498" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>393</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E239498" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57882" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59297"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTA</genome_strand>
        <mrna_strand>CCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGGTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E713723" ref_strand="+" ref_description="SGN-E713723 [FB09BH04]">
      <seq>ggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcagaaaaaggcggtttccttggaagtgctgtcaagtggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacataaaaaatctgttgggtgtggcttgagcactacaggtgtgaaagttcagcatatgtattgaccttcagttggaagtgctttcatggttctatctttttccttcttccctgcctacgaaacaagcgagcttgtaccccacccccttagattttccttgttgatgtactttggttgtgtaaactcgttcattgccatgaatttgtaataaaagttgcatagtagttgttttaatgactcgggactgtagttgctcgatatacaagtatgttatcgccttaataataagaaataagttgtgtgcaggatgtcttgcgtaggtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57622" stop="59773"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57922" g_stop="57953" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="200" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59145" g_stop="59480" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="536" r_length="336" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E713723" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E713723" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57922" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59480"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAGGATGTCTTGCGTAGGTAAACTGATTA</genome_strand>
        <mrna_strand>GGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGATTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAGGATGTCTTGCGTAGGTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E713795" ref_strand="+" ref_description="SGN-E713795 [FB09CG04]">
      <seq>ggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcagaaaaaggcggtttccttggaagtgctgtcaagtggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacataaaaaatctgttgggtgtggcttgagcactacaggtgtgaaagttcagcatatgtattgaccttcagttggaagtgctttcatggttctatctttttccttcttccctgcctacgaaacaagcgagcttgtaccccacccccttagtttttccttgttgatgtactttggttgtgtaaactcgttcattgccatgaatttgtaataaaagttgcatagtagttgttttaatgactcgggactgtagttgctcgatatacaagtatgttatcgccttaataataagaaataagttgtgtgcaggatgtcttgcgtaggtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57622" stop="59773"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57922" g_stop="57953" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="200" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59145" g_stop="59480" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="536" r_length="336" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E713795" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E713795" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57922" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59480"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAGGATGTCTTGCGTAGGTAAACTGATTA</genome_strand>
        <mrna_strand>GGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAGGATGTCTTGCGTAGGTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E714960" ref_strand="+" ref_description="SGN-E714960 [FB12DG05]">
      <seq>ggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcagaaaaaggcggtttccttggaagtgctgtcaagtggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacataaaaaatctgttgggtgtggcttgagcactacaggtgtgaaagttcagcatatgtattgaccttcagttggaagtgctttcatggttctatctttttccttcttccctgcctacgaaacaagcgagcttgtaccccacccccttagtttttccttgttgatgtactttggttgtgtaaactcgttcattgccatgaatttgtaataaaagttgcatagtagttgttttaatgactcgggactgtagttgctcgatatacaagtatgttatcgccttaataataagaaataagttgtgtgcaggatgtcttgcgtaggtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57622" stop="59773"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57922" g_stop="57953" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="200" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59145" g_stop="59480" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="536" r_length="336" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E714960" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E714960" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57922" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59480"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAGGATGTCTTGCGTAGGTAAACTGATTA</genome_strand>
        <mrna_strand>GGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAGGATGTCTTGCGTAGGTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E265548" ref_strand="-" ref_description="SGN-E265548 [cLEI-14-L7]">
      <seq>aagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcagaaaaaggcggtttccttggaagtgctgtcaagtggaacttcaccaaattctttgtggacaaagaaggaaaggttgtggatcgatatgcacccaagacaccacctcttcagtttgagaaagacataaaaaatctgttgggtgtggcttgagcactacaggtgtgaaagttcagcatatgtattgaccttcagttggaagtgctttcatggttctatctttttccttcttccctgcctacgaaacaagcgagcttgtaccccacccccttagtttttccttgttgatgtactttggttgtgtaaactcgttcattgccatgaatttgtaataaaagttgcatagtagttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57628" stop="59677"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57928" g_stop="57953" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="26" r_length="26" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="194" r_length="168" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59145" g_stop="59377" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="427" r_length="233" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E265548" ref_strand="-">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>427</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E265548" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="57928" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59377"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGT</genome_strand>
        <mrna_strand>AAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCTTTGTGGACAAAGAAGGAAAGGTTGTGGATCGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E691250" ref_strand="+" ref_description="SGN-E691250 [LH_Ea05J24]">
      <seq>cgattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcagaaaaaggcggtttccttggaaatgctgtcaagtggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacatacaaaatctgttaggtgtggcttgagcactacaggtgtgagagttcagcatatgtgttgacctttcgttggaaatgctttcatggttctatctttttccttcttccctgcctacgaaacaagcgagcttgtaccccacccccttagtttttccttgttgatgtactttggttgtgtaaactcgttcattgccatgaatttgtaataaaagttgcatagtagttgttttagtgactcgtgactatagttgctcgatatacaagtatgttatcgccttaataataagaaataagttgtgtgcaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="58437" stop="59753"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58736" g_stop="58905" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59145" g_stop="59455" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="481" r_length="311" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="482" polyA_stop="492"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E691250" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E691250" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58736" e_stop="58905"/>
          <exon e_start="59145" e_stop="59455"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAGG</genome_strand>
        <mrna_strand>CGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAATGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATACAAAATCTGTTAGGTGTGGCTTGAGCACTACAGGTGTGAGAGTTCAGCATATGTGTTGACCTTTCGTTGGAAATGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAGTGACTCGTGACTATAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E695090" ref_strand="+" ref_description="SGN-E695090 [LH_Ea05J24](-)">
      <seq>attgatgtgaacggggataatgctgcacccctttacaagttcttgaaatcagaaaaaggcggtttccttggaaatgctgtcaagtggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccaccttttcagtttgagaaagacatacaaaatctgttaggtgtggcttgagcactacaggtgtgagagttcagcatatgtgttgccctttggttggaaatgctttcatggttatatctttttcttttttccctgcctacgaaacaagtgagcttgtaccccacccccttagtttttccttgttgatgtactttggttgtgtaaactcgttcattgccatgaatttgtaataaaagttgcatagtagttgttttagaggctcgtgactatagttgctcgatatccaagtatgttataggcttaataataagaaataagttgggcaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="58438" stop="59753"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="168" r_length="168" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59145" g_stop="59446" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="470" r_length="302" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="475" polyA_stop="493"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E695090" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>470</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E695090" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59446"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTT</genome_strand>
        <mrna_strand>ATTGATGTGAACGGGGATAATGCTGCACCCCTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAATGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTTTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATACAAAATCTGTTAGGTGTGGCTTGAGCACTACAGGTGTGAGAGTTCAGCATATGTGTTGCCCTTTGGTTGGAAATGCTTTCATGGTTATATCTTTTTCTTTTTTCCCTGCCTACGAAACAAGTGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAGAGGCTCGTGACTATAGTTGCTCGATATCCAAGTATGTTATAGGCTTAATAATAAGAAATAAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E257123" ref_strand="-" ref_description="SGN-E257123 [cLEG-46-C1]">
      <seq>aagggtatgtagaaaattcagatgaagatgattagggaggacaaagagtttgactgatgatgatttagaggagcttaaagggtgtttagatcttggttttggtttcagttatgatgaaattcctgagctttgtaatactttaccagctcttgaactttgctattctatgagccaaaagtaccttgatgaacagcaaaagtgttctgatgctatgtctgatactggttcttctggatctggtcatgttgctaattggaagatctctagtcctggtgatgatcctgaagatgtgaaagcaaggctgaaatactgggctcaagctgtggcatgcactgttaaattatgtaactaaaaagggaaaaatggaagccaagaaaagcttaatgcaagatgagaggggaaatgaaatgatcttttcttcatatgaaagagtacttgtgctgtggtctctttgcctggatcctgaaaaaaaaaaggctatggccacaaggccaagaagaaggtacctcatgctttacctgaagatagattcaaaaagaatcatgtccatgatgggtaggcaaagtttaatcaaaatcccaaagtagatgaagaggaaggaagagatgtttcagggctaaaagattaaccaacacatggactaaaatcgatataactttgtgtatcagttttagtcccaagattgcaattcttcttcatgttttaattttgttttcttatgtaatgctgatcaaaatactgttcttggttattaataaatcaagtttcttccttgttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61487" stop="59777"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61187" g_stop="60915" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="272" r_length="272" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60914" i_stop="60583" i_length="332">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60582" g_stop="60076" g_length="507"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="779" r_length="507" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E257123" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>780</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E257123" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="61187" e_stop="60915"/>
          <exon e_start="60582" e_stop="60076"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGGTATGTAGAAAATTCAGATGAAGATGAATTAGGGAGGACAAAGAGTTTGACTGATGATGATTTAGAGGAGCTTAAAGGGTGTTTAGATCTTGGTTTTGGTTTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGTCATGTTGCTAATTGGAAGATCTCTAGTCCTGGTGAGTCTTTTTTTCCCCCCTCTCTCTAGGGTTTTGTATCTGTAACAAGGGTTTGTGAAAAATCTTGTTTTTCTAGTTAGATTCTTGTTAAAAAGCTTTCATTTTTATGTAGTAAAGGTGGAGTCTTTGGAGTTATAAACTCTTTGTTCCTTAACTTTTATGCTTTTGTGTTACAAAAGACTATACCCCAAAAGGAGAAAATGAAAAAAAAAAAAGGGATCTTTTTGTTATGTGTTTCTTGTTTTTTGTTGGTTGGGAAGGTGAAGATGATGAAAAATCTTCAATTTGTTGCTCAATTGTCACTAATGTTGATACATTTTGTAATACCTCAGGTGATGATCCTGAAGATGTGAAAGCAAGGCTGAAATACTGGGCTCAAGCTGTGGCATGCACTGTTAAATTATGTAACTAAAAAGGGAAAAATGGAAGCCAAGAAAAGCTTAATGCAAGATGAGAGGGGAAATGAAATGATCTTTTCTTCATATGAAAGAGTACTTGTGCTGTGGTCTCTTTGCCTGGATCCTGAAAAAAAAAAGGCTATGGCCACAAGGCCAAGAAGAAGGTACCTCATGCTTTACCTGAAGATAGATTCAAAAAGAATCATGTCCATGATGGGTAGGCAAAGTTTAATCAAAATCCCAAAGTAGATGAAGAGGAAGGAAGAGATGTTTCAGGGCTAAAAGATTAACCAACACATGGACTAAAATCGATATAACTTTGTGTATCAGTTTTAGTCCCAAGATTGCAATTCTTCTTCATGTTTTAATTTTGTTTTCTTATGTAATGCTGATCAAAATACTGTTCTTGGTTATTAATAAATCAAGTTTCTTCCTTGTTAT</genome_strand>
        <mrna_strand>AAGGGTATGTAGAAAATTCAGATGAAGATG-ATTAGGGAGGACAAAGAGTTTGACTGATGATGATTTAGAGGAGCTTAAAGGGTGTTTAGATCTTGGTTTTGGTTTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGTCATGTTGCTAATTGGAAGATCTCTAGTCCTG............................................................................................................................................................................................................................................................................................................................................GTGATGATCCTGAAGATGTGAAAGCAAGGCTGAAATACTGGGCTCAAGCTGTGGCATGCACTGTTAAATTATGTAACTAAAAAGGGAAAAATGGAAGCCAAGAAAAGCTTAATGCAAGATGAGAGGGGAAATGAAATGATCTTTTCTTCATATGAAAGAGTACTTGTGCTGTGGTCTCTTTGCCTGGATCCTGAAAAAAAAAAGGCTATGGCCACAAGGCCAAGAAGAAGGTACCTCATGCTTTACCTGAAGATAGATTCAAAAAGAATCATGTCCATGATGGGTAGGCAAAGTTTAATCAAAATCCCAAAGTAGATGAAGAGGAAGGAAGAGATGTTTCAGGGCTAAAAGATTAACCAACACATGGACTAAAATCGATATAACTTTGTGTATCAGTTTTAGTCCCAAGATTGCAATTCTTCTTCATGTTTTAATTTTGTTTTCTTATGTAATGCTGATCAAAATACTGTTCTTGGTTATTAATAAATCAAGTTTCTTCCTTGTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E711418" ref_strand="+" ref_description="SGN-E711418 [FB01DH01]">
      <seq>cccttgatctggtcatgttgctaattggaagatctctagtcctggtgatgatcctgaagatgtgaaagcaaggctgaaatactgggctcaagctgtggcatgcactgttaaattatgtaactaaaaagggaaaaatggaagccaagaaaagcttaatgcaagatgagaggggaaatgaaatgatcttttcttcatatgaaagagtacttgtgctgtggtctctttgcctggatcctgaaaaaaaaaaggctatggccacaaggccaaaaaaaaggtacctcatgctttacctgaagatagattcaaaaagaatcatgtccatgatgggtaggcaaagtttaatcaaaatcccaaagtaaatgaagaggaaggaagagatgtttcagggctaaaagattaaccaacacatggactaaaatcgatataactttgtgtatcagttttagtcccaagattgcaattcttcttcatgttttaattttgttttcttatgtaatgctgatcaaaatactgttcttggttattaataaatcaagtttcttccttgttaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61256" stop="59775"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60958" g_stop="60915" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="44" r_length="44" r_score="0.932"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60914" i_stop="60583" i_length="332">
            <donor d_prob="0.981" d_score="0.93"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60582" g_stop="60078" g_length="505"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="549" r_length="505" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="550" polyA_stop="562"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E711418" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E711418" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60958" e_stop="60915"/>
          <exon e_start="60582" e_stop="60078"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTGGATCTGGTCATGTTGCTAATTGGAAGATCTCTAGTCCTGGTGAGTCTTTTTTTCCCCCCTCTCTCTAGGGTTTTGTATCTGTAACAAGGGTTTGTGAAAAATCTTGTTTTTCTAGTTAGATTCTTGTTAAAAAGCTTTCATTTTTATGTAGTAAAGGTGGAGTCTTTGGAGTTATAAACTCTTTGTTCCTTAACTTTTATGCTTTTGTGTTACAAAAGACTATACCCCAAAAGGAGAAAATGAAAAAAAAAAAAGGGATCTTTTTGTTATGTGTTTCTTGTTTTTTGTTGGTTGGGAAGGTGAAGATGATGAAAAATCTTCAATTTGTTGCTCAATTGTCACTAATGTTGATACATTTTGTAATACCTCAGGTGATGATCCTGAAGATGTGAAAGCAAGGCTGAAATACTGGGCTCAAGCTGTGGCATGCACTGTTAAATTATGTAACTAAAAAGGGAAAAATGGAAGCCAAGAAAAGCTTAATGCAAGATGAGAGGGGAAATGAAATGATCTTTTCTTCATATGAAAGAGTACTTGTGCTGTGGTCTCTTTGCCTGGATCCTGAAAAAAAAAAGGCTATGGCCACAAGGCCAAGAAGAAGGTACCTCATGCTTTACCTGAAGATAGATTCAAAAAGAATCATGTCCATGATGGGTAGGCAAAGTTTAATCAAAATCCCAAAGTAGATGAAGAGGAAGGAAGAGATGTTTCAGGGCTAAAAGATTAACCAACACATGGACTAAAATCGATATAACTTTGTGTATCAGTTTTAGTCCCAAGATTGCAATTCTTCTTCATGTTTTAATTTTGTTTTCTTATGTAATGCTGATCAAAATACTGTTCTTGGTTATTAATAAATCAAGTTTCTTCCTTGTT</genome_strand>
        <mrna_strand>CCCTTGATCTGGTCATGTTGCTAATTGGAAGATCTCTAGTCCTG............................................................................................................................................................................................................................................................................................................................................GTGATGATCCTGAAGATGTGAAAGCAAGGCTGAAATACTGGGCTCAAGCTGTGGCATGCACTGTTAAATTATGTAACTAAAAAGGGAAAAATGGAAGCCAAGAAAAGCTTAATGCAAGATGAGAGGGGAAATGAAATGATCTTTTCTTCATATGAAAGAGTACTTGTGCTGTGGTCTCTTTGCCTGGATCCTGAAAAAAAAAAGGCTATGGCCACAAGGCCAAAAAAAAGGTACCTCATGCTTTACCTGAAGATAGATTCAAAAAGAATCATGTCCATGATGGGTAGGCAAAGTTTAATCAAAATCCCAAAGTAAATGAAGAGGAAGGAAGAGATGTTTCAGGGCTAAAAGATTAACCAACACATGGACTAAAATCGATATAACTTTGTGTATCAGTTTTAGTCCCAAGATTGCAATTCTTCTTCATGTTTTAATTTTGTTTTCTTATGTAATGCTGATCAAAATACTGTTCTTGGTTATTAATAAATCAAGTTTCTTCCTTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E218656" ref_strand="+" ref_description="SGN-E218656 [cLEL-18-N10](-)">
      <seq>aaaaaaaaggctatggccacaaggccaagaagaaggtacctcatgctttacctgaagatagattcaaaaagaatcatgtccatgatgggtaggcaaagtttaatcaaaatcccaaagtagatgaagaggaaggaagagatgtttcagggctaaaagattaaccaacacatggactaaaatcgatataactttgtgtatcagttttagtcccaagattgcaattcttcttcatgttttaattttgttttcttatgtaatgctgatcaaaatactgttcttggttattaataaatcaagtttcttccttgttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="60687" stop="59775"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60387" g_stop="60078" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="310" r_length="310" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="311" polyA_stop="327"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E218656" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>310</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E218656" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60387" e_stop="60078"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAAAGGCTATGGCCACAAGGCCAAGAAGAAGGTACCTCATGCTTTACCTGAAGATAGATTCAAAAAGAATCATGTCCATGATGGGTAGGCAAAGTTTAATCAAAATCCCAAAGTAGATGAAGAGGAAGGAAGAGATGTTTCAGGGCTAAAAGATTAACCAACACATGGACTAAAATCGATATAACTTTGTGTATCAGTTTTAGTCCCAAGATTGCAATTCTTCTTCATGTTTTAATTTTGTTTTCTTATGTAATGCTGATCAAAATACTGTTCTTGGTTATTAATAAATCAAGTTTCTTCCTTGTT</genome_strand>
        <mrna_strand>AAAAAAAAGGCTATGGCCACAAGGCCAAGAAGAAGGTACCTCATGCTTTACCTGAAGATAGATTCAAAAAGAATCATGTCCATGATGGGTAGGCAAAGTTTAATCAAAATCCCAAAGTAGATGAAGAGGAAGGAAGAGATGTTTCAGGGCTAAAAGATTAACCAACACATGGACTAAAATCGATATAACTTTGTGTATCAGTTTTAGTCCCAAGATTGCAATTCTTCTTCATGTTTTAATTTTGTTTTCTTATGTAATGCTGATCAAAATACTGTTCTTGGTTATTAATAAATCAAGTTTCTTCCTTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E716284" ref_strand="+" ref_description="SGN-E716284 [FB16CE06]">
      <seq>gagattaccaacacaccacaaagtggatggtttaggaatgttgaggagccatggttgaatagtagatctcaaaagaagaagaaaaatcaagtgtttcttgaagggtatgtagaaaattcagatgaagatgaattagggaggacaaagagtttgactgatgatgatttagaggagcttaaagggtgtttagatcttggttttggtttcagttatgatgaaattcctgagctttgtaatactttaccagctcttgaactttgctattctatgagccaaaagtaccttgatgaacagcaaaagtgttctgatgctatgtctgatactggttcttctggatctggtcatgttgctaattggaagatctctagtcctggtgatgatcctgaagatgtgaaagcaaggctgaaatactgggctcaagctgtggcatgcactgttaaattatgtaactaaaaagggaaaaatggaagccaagaaaagcttaatgcaagatgagaggggaaatgaaatgatcttttcttcatatgaaagagtacttgtgctgtggtctctttgcctggatcctgaaaaaaaaaaggctatggccacaaggccaagaagaaggtacctcatgctttacctgaagatagattcaaaaagaatcatgtccatgatgggtaggcaaagtttaatcaaaatcccaaagtagatgaagaggaaggaagagatgtttcagggctnaaagattaaccaacacatggactanaatcgatataactttgtgtatcagttttagtcccaagattgcaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61587" stop="59865"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61287" g_stop="60915" g_length="373"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="373" r_length="373" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60914" i_stop="60583" i_length="332">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60582" g_stop="60165" g_length="418"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="791" r_length="418" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E716284" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>791</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E716284" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61287" e_stop="60915"/>
          <exon e_start="60582" e_stop="60165"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGATTACCAACACACCACAAAGTGGATGGTTTAGGAATGTTGAGGAGCCATGGTTGAATAGTAGATCTCAAAAGAAGAAGAAAAATCAAGTGTTTCTTGAAGGGTATGTAGAAAATTCAGATGAAGATGAATTAGGGAGGACAAAGAGTTTGACTGATGATGATTTAGAGGAGCTTAAAGGGTGTTTAGATCTTGGTTTTGGTTTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGTCATGTTGCTAATTGGAAGATCTCTAGTCCTGGTGAGTCTTTTTTTCCCCCCTCTCTCTAGGGTTTTGTATCTGTAACAAGGGTTTGTGAAAAATCTTGTTTTTCTAGTTAGATTCTTGTTAAAAAGCTTTCATTTTTATGTAGTAAAGGTGGAGTCTTTGGAGTTATAAACTCTTTGTTCCTTAACTTTTATGCTTTTGTGTTACAAAAGACTATACCCCAAAAGGAGAAAATGAAAAAAAAAAAAGGGATCTTTTTGTTATGTGTTTCTTGTTTTTTGTTGGTTGGGAAGGTGAAGATGATGAAAAATCTTCAATTTGTTGCTCAATTGTCACTAATGTTGATACATTTTGTAATACCTCAGGTGATGATCCTGAAGATGTGAAAGCAAGGCTGAAATACTGGGCTCAAGCTGTGGCATGCACTGTTAAATTATGTAACTAAAAAGGGAAAAATGGAAGCCAAGAAAAGCTTAATGCAAGATGAGAGGGGAAATGAAATGATCTTTTCTTCATATGAAAGAGTACTTGTGCTGTGGTCTCTTTGCCTGGATCCTGAAAAAAAAAAGGCTATGGCCACAAGGCCAAGAAGAAGGTACCTCATGCTTTACCTGAAGATAGATTCAAAAAGAATCATGTCCATGATGGGTAGGCAAAGTTTAATCAAAATCCCAAAGTAGATGAAGAGGAAGGAAGAGATGTTTCAGGGCTAAAAGATTAACCAACACATGGACTAAAATCGATATAACTTTGTGTATCAGTTTTAGTCCCAAGATTGCAATT</genome_strand>
        <mrna_strand>GAGATTACCAACACACCACAAAGTGGATGGTTTAGGAATGTTGAGGAGCCATGGTTGAATAGTAGATCTCAAAAGAAGAAGAAAAATCAAGTGTTTCTTGAAGGGTATGTAGAAAATTCAGATGAAGATGAATTAGGGAGGACAAAGAGTTTGACTGATGATGATTTAGAGGAGCTTAAAGGGTGTTTAGATCTTGGTTTTGGTTTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGTCATGTTGCTAATTGGAAGATCTCTAGTCCTG............................................................................................................................................................................................................................................................................................................................................GTGATGATCCTGAAGATGTGAAAGCAAGGCTGAAATACTGGGCTCAAGCTGTGGCATGCACTGTTAAATTATGTAACTAAAAAGGGAAAAATGGAAGCCAAGAAAAGCTTAATGCAAGATGAGAGGGGAAATGAAATGATCTTTTCTTCATATGAAAGAGTACTTGTGCTGTGGTCTCTTTGCCTGGATCCTGAAAAAAAAAAGGCTATGGCCACAAGGCCAAGAAGAAGGTACCTCATGCTTTACCTGAAGATAGATTCAAAAAGAATCATGTCCATGATGGGTAGGCAAAGTTTAATCAAAATCCCAAAGTAGATGAAGAGGAAGGAAGAGATGTTTCAGGGCTNAAAGATTAACCAACACATGGACTANAATCGATATAACTTTGTGTATCAGTTTTAGTCCCAAGATTGCAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E701245" ref_strand="+" ref_description="SGN-E701245 [FA15BG04]">
      <seq>gaagagaaaaacactcaaaaaagtttggaagaaaaaaaaatggaaactttttctcatctatcatcaagatccaggtcttgtgagagcttttttaatgatggtgttgagcaaataccaggggaagtagtgggagaggaagaagaagaagaagaacaaatggaggagattaccaacacaccacaaagtggatggtttaggaatgttgaggagccatggttgaatagtagatctcaaaagaagaagaaaaatcaagtgtttcttgaagggtatgtagaaaattcagatgaagatgaattagggaggacaaagagtttgactgatgatgatttagaggagcttaaagggtgtttagatcttggttttggtttcagttatgatgaaattcctgagctttgtaatactttaccagctcttgaactttgctattctatgagccaaaagtaccttgatgaacagcaaaagtgttctgatgctatgtctgatactggttcttctggatctggtcatgttgctaattggaagatctctagtcctggtgatgatcctgaagatgtgaaagcaaggctgaaatactgggctcaagctgtggcatgcactgttaaattatgtaactaaaaagggaaaaatggaagccaagaaaagcttaatgcaagatgagaggggaaatgaaatgatcttttcttcatatgaaagagtacttgtgctgtggtctctttgcctggatcctgaaaaaaaaaaggctatggccacaaggccaaaaaaaaggtccctcatgctttacctgaaaatatattcaaaaaaaatcttgcccatgatgggaaggcaaagtttattcaaaatcccaaagtaaatgaaaagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61749" stop="59958"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61449" g_stop="60915" g_length="535"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="535" r_length="535" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60914" i_stop="60583" i_length="332">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60582" g_stop="60258" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="536" r_stop="860" r_length="325" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E701245" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>860</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E701245" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61449" e_stop="60915"/>
          <exon e_start="60582" e_stop="60258"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAGAAAAACACTCAAAAAAGTTTGGAAGAAAAAAAAATGGAAACTTTTTCTCATCTATCATCAAGATCCAGGTCTTGTGAGAGCTTTTTTAATGATGGTGTTGAGCAAATACCAGGGGAAGTAGTGGGAGAGGAAGAAGAAGAAGAAGAACAAATGGAGGAGATTACCAACACACCACAAAGTGGATGGTTTAGGAATGTTGAGGAGCCATGGTTGAATAGTAGATCTCAAAAGAAGAAGAAAAATCAAGTGTTTCTTGAAGGGTATGTAGAAAATTCAGATGAAGATGAATTAGGGAGGACAAAGAGTTTGACTGATGATGATTTAGAGGAGCTTAAAGGGTGTTTAGATCTTGGTTTTGGTTTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGTCATGTTGCTAATTGGAAGATCTCTAGTCCTGGTGAGTCTTTTTTTCCCCCCTCTCTCTAGGGTTTTGTATCTGTAACAAGGGTTTGTGAAAAATCTTGTTTTTCTAGTTAGATTCTTGTTAAAAAGCTTTCATTTTTATGTAGTAAAGGTGGAGTCTTTGGAGTTATAAACTCTTTGTTCCTTAACTTTTATGCTTTTGTGTTACAAAAGACTATACCCCAAAAGGAGAAAATGAAAAAAAAAAAAGGGATCTTTTTGTTATGTGTTTCTTGTTTTTTGTTGGTTGGGAAGGTGAAGATGATGAAAAATCTTCAATTTGTTGCTCAATTGTCACTAATGTTGATACATTTTGTAATACCTCAGGTGATGATCCTGAAGATGTGAAAGCAAGGCTGAAATACTGGGCTCAAGCTGTGGCATGCACTGTTAAATTATGTAACTAAAAAGGGAAAAATGGAAGCCAAGAAAAGCTTAATGCAAGATGAGAGGGGAAATGAAATGATCTTTTCTTCATATGAAAGAGTACTTGTGCTGTGGTCTCTTTGCCTGGATCCTGAAAAAAAAAAGGCTATGGCCACAAGGCCAAGAAGAAGGTACCTCATGCTTTACCTGAAGATAGATTCAAAAAGAATCATGTCCATGATGGGTAGGCAAAGTTTAATCAAAATCCCAAAGTAGATGAAGAGGA</genome_strand>
        <mrna_strand>GAAGAGAAAAACACTCAAAAAAGTTTGGAAGAAAAAAAAATGGAAACTTTTTCTCATCTATCATCAAGATCCAGGTCTTGTGAGAGCTTTTTTAATGATGGTGTTGAGCAAATACCAGGGGAAGTAGTGGGAGAGGAAGAAGAAGAAGAAGAACAAATGGAGGAGATTACCAACACACCACAAAGTGGATGGTTTAGGAATGTTGAGGAGCCATGGTTGAATAGTAGATCTCAAAAGAAGAAGAAAAATCAAGTGTTTCTTGAAGGGTATGTAGAAAATTCAGATGAAGATGAATTAGGGAGGACAAAGAGTTTGACTGATGATGATTTAGAGGAGCTTAAAGGGTGTTTAGATCTTGGTTTTGGTTTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGTCATGTTGCTAATTGGAAGATCTCTAGTCCTG............................................................................................................................................................................................................................................................................................................................................GTGATGATCCTGAAGATGTGAAAGCAAGGCTGAAATACTGGGCTCAAGCTGTGGCATGCACTGTTAAATTATGTAACTAAAAAGGGAAAAATGGAAGCCAAGAAAAGCTTAATGCAAGATGAGAGGGGAAATGAAATGATCTTTTCTTCATATGAAAGAGTACTTGTGCTGTGGTCTCTTTGCCTGGATCCTGAAAAAAAAAAGGCTATGGCCACAAGGCCAAAAAAAAGGTCCCTCATGCTTTACCTGAAAATATATTCAAAAAAAATCTTGCCCATGATGGGAAGGCAAAGTTTATTCAAAATCCCAAAGTAAATGAAAAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E238298" ref_strand="+" ref_description="SGN-E238298 [cLED-17-A17]">
      <seq>ttcagttatgatgaaattcctgagctttgtaatactttaccagctcttgaactttgctattctatgagccaaaagtaccttgatgaacagcaaaagtgttctgatgctatgtctgatactggttcttctggatctggtcatgttgctaattggaagatctctagtcctggtgatgatcctgaagatgtgaaagcaaggctgaaatactgggctcaagctgtggcatgcactgttaaattatgtaactaaaaagggaaaaatggaagccaagaaaagcttaatgcaagatgagaggggaaatgaaatgatcttttcttcatatgaaagagtccttgtgctgtggtctctttgcctggatcctgaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61383" stop="60081"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61083" g_stop="60915" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="169" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60914" i_stop="60583" i_length="332">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60582" g_stop="60381" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="371" r_length="202" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E238298" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>371</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E238298" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61083" e_stop="60915"/>
          <exon e_start="60582" e_stop="60381"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGTCATGTTGCTAATTGGAAGATCTCTAGTCCTGGTGAGTCTTTTTTTCCCCCCTCTCTCTAGGGTTTTGTATCTGTAACAAGGGTTTGTGAAAAATCTTGTTTTTCTAGTTAGATTCTTGTTAAAAAGCTTTCATTTTTATGTAGTAAAGGTGGAGTCTTTGGAGTTATAAACTCTTTGTTCCTTAACTTTTATGCTTTTGTGTTACAAAAGACTATACCCCAAAAGGAGAAAATGAAAAAAAAAAAAGGGATCTTTTTGTTATGTGTTTCTTGTTTTTTGTTGGTTGGGAAGGTGAAGATGATGAAAAATCTTCAATTTGTTGCTCAATTGTCACTAATGTTGATACATTTTGTAATACCTCAGGTGATGATCCTGAAGATGTGAAAGCAAGGCTGAAATACTGGGCTCAAGCTGTGGCATGCACTGTTAAATTATGTAACTAAAAAGGGAAAAATGGAAGCCAAGAAAAGCTTAATGCAAGATGAGAGGGGAAATGAAATGATCTTTTCTTCATATGAAAGAGTACTTGTGCTGTGGTCTCTTTGCCTGGATCCTGAAAAAAAAA</genome_strand>
        <mrna_strand>TTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGTCATGTTGCTAATTGGAAGATCTCTAGTCCTG............................................................................................................................................................................................................................................................................................................................................GTGATGATCCTGAAGATGTGAAAGCAAGGCTGAAATACTGGGCTCAAGCTGTGGCATGCACTGTTAAATTATGTAACTAAAAAGGGAAAAATGGAAGCCAAGAAAAGCTTAATGCAAGATGAGAGGGGAAATGAAATGATCTTTTCTTCATATGAAAGAGTCCTTGTGCTGTGGTCTCTTTGCCTGGATCCTGAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E373059" ref_strand="+" ref_description="SGN-E373059 [TUS-32-C15]">
      <seq>aagagaaaaacactcaaaaaagtttggaagaaaaaaaaatggaaactttttctcatctatcatcaagatccaggtcttgtgagagcttttttaatgatggtgttgagcaaataccaggggaagtagtgggagaggaagaagaagaagaagaacaaatggaggagattaccaacacaccacaaagtggatggtttaggaatgttgaggagccatggttgaatagtagatctcaaaagaagaagaaaaatcaagtgtttcttgaagggtatgtagaaaattcagatgaagatgaattagggaggacaaagagtttgactgatgatgatttagaggagcttaaagggtgtttagatcttggttttggtttcagttatgatgaaattcctgagctttgtaatactttaccagctcttgaactttgctattctatgagccaaaagtaccttgatgaacagcaaaagtgttctgatgctatgtctgatactggttcttctggatctggtcatgttgctaattggaagatctctagtcctggtgatgatcctgaagatgtgaaagcaaggctggaatactgggctcaagctgtggcatgcactgttaaattatgtaactaaaaagggaaaaatggaagccaagaaaagcttaatgcaagatgagaggggaaatgaaatgatcttttcttcatatgaaagagtacttgtgctgtggtctctttgcctggatcctgaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61748" stop="60082"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61448" g_stop="60915" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="534" r_length="534" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60914" i_stop="60583" i_length="332">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60582" g_stop="60382" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="535" r_stop="735" r_length="201" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E373059" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E373059" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61448" e_stop="60915"/>
          <exon e_start="60582" e_stop="60382"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGAAAAACACTCAAAAAAGTTTGGAAGAAAAAAAAATGGAAACTTTTTCTCATCTATCATCAAGATCCAGGTCTTGTGAGAGCTTTTTTAATGATGGTGTTGAGCAAATACCAGGGGAAGTAGTGGGAGAGGAAGAAGAAGAAGAAGAACAAATGGAGGAGATTACCAACACACCACAAAGTGGATGGTTTAGGAATGTTGAGGAGCCATGGTTGAATAGTAGATCTCAAAAGAAGAAGAAAAATCAAGTGTTTCTTGAAGGGTATGTAGAAAATTCAGATGAAGATGAATTAGGGAGGACAAAGAGTTTGACTGATGATGATTTAGAGGAGCTTAAAGGGTGTTTAGATCTTGGTTTTGGTTTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGTCATGTTGCTAATTGGAAGATCTCTAGTCCTGGTGAGTCTTTTTTTCCCCCCTCTCTCTAGGGTTTTGTATCTGTAACAAGGGTTTGTGAAAAATCTTGTTTTTCTAGTTAGATTCTTGTTAAAAAGCTTTCATTTTTATGTAGTAAAGGTGGAGTCTTTGGAGTTATAAACTCTTTGTTCCTTAACTTTTATGCTTTTGTGTTACAAAAGACTATACCCCAAAAGGAGAAAATGAAAAAAAAAAAAGGGATCTTTTTGTTATGTGTTTCTTGTTTTTTGTTGGTTGGGAAGGTGAAGATGATGAAAAATCTTCAATTTGTTGCTCAATTGTCACTAATGTTGATACATTTTGTAATACCTCAGGTGATGATCCTGAAGATGTGAAAGCAAGGCTGAAATACTGGGCTCAAGCTGTGGCATGCACTGTTAAATTATGTAACTAAAAAGGGAAAAATGGAAGCCAAGAAAAGCTTAATGCAAGATGAGAGGGGAAATGAAATGATCTTTTCTTCATATGAAAGAGTACTTGTGCTGTGGTCTCTTTGCCTGGATCCTGAAAAAAAA</genome_strand>
        <mrna_strand>AAGAGAAAAACACTCAAAAAAGTTTGGAAGAAAAAAAAATGGAAACTTTTTCTCATCTATCATCAAGATCCAGGTCTTGTGAGAGCTTTTTTAATGATGGTGTTGAGCAAATACCAGGGGAAGTAGTGGGAGAGGAAGAAGAAGAAGAAGAACAAATGGAGGAGATTACCAACACACCACAAAGTGGATGGTTTAGGAATGTTGAGGAGCCATGGTTGAATAGTAGATCTCAAAAGAAGAAGAAAAATCAAGTGTTTCTTGAAGGGTATGTAGAAAATTCAGATGAAGATGAATTAGGGAGGACAAAGAGTTTGACTGATGATGATTTAGAGGAGCTTAAAGGGTGTTTAGATCTTGGTTTTGGTTTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGTCATGTTGCTAATTGGAAGATCTCTAGTCCTG............................................................................................................................................................................................................................................................................................................................................GTGATGATCCTGAAGATGTGAAAGCAAGGCTGGAATACTGGGCTCAAGCTGTGGCATGCACTGTTAAATTATGTAACTAAAAAGGGAAAAATGGAAGCCAAGAAAAGCTTAATGCAAGATGAGAGGGGAAATGAAATGATCTTTTCTTCATATGAAAGAGTACTTGTGCTGTGGTCTCTTTGCCTGGATCCTGAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E439997" ref_strand="+" ref_description="SGN-E439997 [cSTA-14-H21]">
      <seq>caaagttggaagaaaaaaatggaaactttttctcatctatcatcaacaacaacaagatccaggtcttgtgaaagcttttttaatgatggtgttgagcaaataccagaggtagtggaagaggaagaagaacaaatggaagagatttcttggaacaccaacacaccacaaagtggctggttcaggaatgttgaggagccatggttgaatagtagatctcaaaagaagaaaaatcaagtctttcttgaagggtatgtagaaaattcagatgaagatgaactagggaggacaaagagtttgacagatgatgatttggaggagcttaaagggtgtttggatcttggttttgggtttagttatgatgaaattcctgagctttgtaatactttaccagctcttgaactttgctattctatgagccaaaagtaccttgatgaacagcagaaatgttctgatgctatgtctgatactggttcttcaggatctggtcatgttgctaattggaagatctcaagtcctggtgatgatcctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61702" stop="60606"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61381" g_stop="60915" g_length="467"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="517" r_length="461" r_score="0.923"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60914" i_stop="60655" i_length="260">
            <donor d_prob="0.981" d_score="0.96"/>
            <acceptor a_prob="0.922" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60654" g_stop="60642" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="518" r_stop="530" r_length="13" r_score="0.769"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E439997" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="0.906" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E439997" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61381" e_stop="60915"/>
          <exon e_start="60654" e_stop="60642"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCAGGTCTTGTGAGAGCTTTTTTAATGATGGTGTTGAGCAAATACCAGGGGAAGTAGTGGGAGAGGAAGAAGAAGAAGAAGAACAAATGGAGGAGATTACCAACACACCACAAAGTGGATGGTTTAGGAATGTTGAGGAGCCATGGTTGAATAGTAGATCTCAAAAGAAGAAGAAAAATCAAGTGTTTCTTGAAGGGTATGTAGAAAATTCAGATGAAGATGAATTAGGGAGGACAAAGAGTTTGACTGATGATGATTTAGAGGAGCTTAAAGGGTGTTTAGATCTTGGTTTTGGTTTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGTCATGTTGCTAATTGGAAGATCTCTAGTCCTGGTGAGTCTTTTTTTCCCCCCTCTCTCTAGGGTTTTGTATCTGTAACAAGGGTTTGTGAAAAATCTTGTTTTTCTAGTTAGATTCTTGTTAAAAAGCTTTCATTTTTATGTAGTAAAGGTGGAGTCTTTGGAGTTATAAACTCTTTGTTCCTTAACTTTTATGCTTTTGTGTTACAAAAGACTATACCCCAAAAGGAGAAAATGAAAAAAAAAAAAGGGATCTTTTTGTTATGTGTTTCTTGTTTTTTGTTGGTTGGGAAGGTGAAGATGATGA</genome_strand>
        <mrna_strand>ATCCAGGTCTTGTGAAAGCTTTTTTAATGATGGTGTTGAGCAAATACCA---GAGGTAGTGGAAGAGGAAGAAGAACAAATGGAAGAGATTTCTTGGAACACCAACACACCACAAAGTGGCTGGTTCAGGAATGTTGAGGAGCCATGGTTGAATAGTAGATCTC--AA-AAGAAGAAAAATCAAGTCTTTCTTGAAGGGTATGTAGAAAATTCAGATGAAGATGAACTAGGGAGGACAAAGAGTTTGACAGATGATGATTTGGAGGAGCTTAAAGGGTGTTTGGATCTTGGTTTTGGGTTTAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAGAAATGTTCTGATGCTATGTCTGATACTGGTTCTTCAGGATCTGGTCATGTTGCTAATTGGAAGATCTCAAGTCCTG....................................................................................................................................................................................................................................................................GTGATGATCCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E235296" ref_strand="+" ref_description="SGN-E235296 [cLED-11-A22]">
      <seq>aaaacactcaaaaaagtttggaagaaaaaaaaatggaaactttttctcatctatcatcaagatccaggtcttgtgagagcttttttaatgatggtgttgagcaaataccaggggaagtagtgggagaggaagaagaagaagaagaacaaatggaggagattaccaacacaccacaaagtggatggtttaggaatgttgaggagccatggttgaatagtagatctcaaaagaagaagaaaaatcaagtgtttcttgaagggtatgtagaaaattcagatgaagatgaattagggaggacaaagagtttgactgatgatgatttagaggagcttaaagggtgtttagatcttggttttggtttcagttatgatgaaattcctgagctttgtaatactttaccagctcttgaactttgctattctatgagccaaaagtaccttgatgaacagcaaaagtgttctgatgctatgtctgatactggttcttctggatctggtcatgttgctaattggaagatctctagtcctggtgagtctttttttcccccctctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61742" stop="60590"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61442" g_stop="60890" g_length="553"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="553" r_length="553" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E235296" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E235296" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61442" e_stop="60890"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACACTCAAAAAAGTTTGGAAGAAAAAAAAATGGAAACTTTTTCTCATCTATCATCAAGATCCAGGTCTTGTGAGAGCTTTTTTAATGATGGTGTTGAGCAAATACCAGGGGAAGTAGTGGGAGAGGAAGAAGAAGAAGAAGAACAAATGGAGGAGATTACCAACACACCACAAAGTGGATGGTTTAGGAATGTTGAGGAGCCATGGTTGAATAGTAGATCTCAAAAGAAGAAGAAAAATCAAGTGTTTCTTGAAGGGTATGTAGAAAATTCAGATGAAGATGAATTAGGGAGGACAAAGAGTTTGACTGATGATGATTTAGAGGAGCTTAAAGGGTGTTTAGATCTTGGTTTTGGTTTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGTCATGTTGCTAATTGGAAGATCTCTAGTCCTGGTGAGTCTTTTTTTCCCCCCTCTCT</genome_strand>
        <mrna_strand>AAAACACTCAAAAAAGTTTGGAAGAAAAAAAAATGGAAACTTTTTCTCATCTATCATCAAGATCCAGGTCTTGTGAGAGCTTTTTTAATGATGGTGTTGAGCAAATACCAGGGGAAGTAGTGGGAGAGGAAGAAGAAGAAGAAGAACAAATGGAGGAGATTACCAACACACCACAAAGTGGATGGTTTAGGAATGTTGAGGAGCCATGGTTGAATAGTAGATCTCAAAAGAAGAAGAAAAATCAAGTGTTTCTTGAAGGGTATGTAGAAAATTCAGATGAAGATGAATTAGGGAGGACAAAGAGTTTGACTGATGATGATTTAGAGGAGCTTAAAGGGTGTTTAGATCTTGGTTTTGGTTTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGTCATGTTGCTAATTGGAAGATCTCTAGTCCTGGTGAGTCTTTTTTTCCCCCCTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E292261" ref_strand="+" ref_description="SGN-E292261 [cLET-1-P2]">
      <seq>aagagaaaaacactcaaaaaagtttggaagaaaaaaaaatggaaactttttctcatctatcatcaagatccaggtcttgtgagagcttttttaatgatggtgttgagcaaataccacgggaagtagtgggagaggaagaagaacaataagaacaaatggaggagattaccaacacaccacaaagtggatggtttaggaatgttgaggagccatggttgaatagtagatctcaaaagaagaagaaaaatcaagtgtttcttgaagggtatgtagaaaattcacatgaagatgaattatggaggacaaagagtttgactgatgatgatttataggagcttaaagggtgtttagatcttggctttggtttcagttatgatgaaattcctgagctttgtaatactttaccagctcttgaactttgctattctatgagccaaaagtaccttgatgaacagcaaaagtgttctgatgctatgtctgatactggttcttctggatctggtcatgttgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61748" stop="60637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61448" g_stop="60937" g_length="512"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="512" r_length="512" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E292261" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E292261" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61448" e_stop="60937"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGAAAAACACTCAAAAAAGTTTGGAAGAAAAAAAAATGGAAACTTTTTCTCATCTATCATCAAGATCCAGGTCTTGTGAGAGCTTTTTTAATGATGGTGTTGAGCAAATACCAGGGGAAGTAGTGGGAGAGGAAGAAGAAGAAGAAGAACAAATGGAGGAGATTACCAACACACCACAAAGTGGATGGTTTAGGAATGTTGAGGAGCCATGGTTGAATAGTAGATCTCAAAAGAAGAAGAAAAATCAAGTGTTTCTTGAAGGGTATGTAGAAAATTCAGATGAAGATGAATTAGGGAGGACAAAGAGTTTGACTGATGATGATTTAGAGGAGCTTAAAGGGTGTTTAGATCTTGGTTTTGGTTTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGTCATGTTGCT</genome_strand>
        <mrna_strand>AAGAGAAAAACACTCAAAAAAGTTTGGAAGAAAAAAAAATGGAAACTTTTTCTCATCTATCATCAAGATCCAGGTCTTGTGAGAGCTTTTTTAATGATGGTGTTGAGCAAATACCACGGGAAGTAGTGGGAGAGGAAGAAGAACAATAAGAACAAATGGAGGAGATTACCAACACACCACAAAGTGGATGGTTTAGGAATGTTGAGGAGCCATGGTTGAATAGTAGATCTCAAAAGAAGAAGAAAAATCAAGTGTTTCTTGAAGGGTATGTAGAAAATTCACATGAAGATGAATTATGGAGGACAAAGAGTTTGACTGATGATGATTTATAGGAGCTTAAAGGGTGTTTAGATCTTGGCTTTGGTTTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGTCATGTTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E202870" ref_strand="+" ref_description="SGN-E202870 [cLEB-1-D7]">
      <seq>gcacgagaaaaacactcaaaaaagtttggaagaaaaaaaaatggaaactttttctcatctatcatcaagatccaggtcttgtgagagcttttttaatgatggtgttgagcaaataccaggggaagtagtgggagaggaagaagaagaagaagaacaaatggaggagattaccaacacaccacaaagtggatggtttaggaatgttgaggagccatggttgaatagtagatctcaaaagaagaagaaaaatcaagtgtttcttgaagggtatgtagaaaattcagatgaagatgaattagggaggacaaagagtttgactgatgatgatttagaggagcttaaagggtgtttagatcttggttttggtttcagttatgatgaaattcctgagctttgtaatactttaccagctcttgaactttgctattctatgagccaaaagtaccttgatgaacagtaaaagtgttctgatgctatgtctgatactggttcttctggatctggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61748" stop="60646"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61450" g_stop="60946" g_length="505"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="505" r_length="505" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E202870" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202870" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61450" e_stop="60946"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGAGAAAAACACTCAAAAAAGTTTGGAAGAAAAAAAAATGGAAACTTTTTCTCATCTATCATCAAGATCCAGGTCTTGTGAGAGCTTTTTTAATGATGGTGTTGAGCAAATACCAGGGGAAGTAGTGGGAGAGGAAGAAGAAGAAGAAGAACAAATGGAGGAGATTACCAACACACCACAAAGTGGATGGTTTAGGAATGTTGAGGAGCCATGGTTGAATAGTAGATCTCAAAAGAAGAAGAAAAATCAAGTGTTTCTTGAAGGGTATGTAGAAAATTCAGATGAAGATGAATTAGGGAGGACAAAGAGTTTGACTGATGATGATTTAGAGGAGCTTAAAGGGTGTTTAGATCTTGGTTTTGGTTTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGT</genome_strand>
        <mrna_strand>GCACGAGAAAAACACTCAAAAAAGTTTGGAAGAAAAAAAAATGGAAACTTTTTCTCATCTATCATCAAGATCCAGGTCTTGTGAGAGCTTTTTTAATGATGGTGTTGAGCAAATACCAGGGGAAGTAGTGGGAGAGGAAGAAGAAGAAGAAGAACAAATGGAGGAGATTACCAACACACCACAAAGTGGATGGTTTAGGAATGTTGAGGAGCCATGGTTGAATAGTAGATCTCAAAAGAAGAAGAAAAATCAAGTGTTTCTTGAAGGGTATGTAGAAAATTCAGATGAAGATGAATTAGGGAGGACAAAGAGTTTGACTGATGATGATTTAGAGGAGCTTAAAGGGTGTTTAGATCTTGGTTTTGGTTTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGTAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E710657" ref_strand="+" ref_description="SGN-E710657 [FA56AE03]">
      <seq>gaagaaaaaaaaatggaaccttttatctctctatcatcaagatccaggtcttgtgagagcttttttactgatggtgttgagcaaataccaggggaagtactgggagaggaagaacaacaagaacacccaatggaggagattacccacacaccacaaagtggatggtttaggaatgttgaggagccatggttgaatactagatctcaaaagaagaagaaaaatcaagtgtttcttgaagggcatgtacaaaattcccatgaagatgaattagggaggacaaccagtttgactgatgatgattta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61722" stop="60820"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61422" g_stop="61120" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="303" r_length="303" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E710657" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>303</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E710657" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61422" e_stop="61120"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAAAAAAAAATGGAAACTTTT-TCTCATCTATCATCAAGATCCAGGTCTTGTGAGAGCTTTTTTAATGATGGTGTTGAGCAAATACCAGGGGAAGTAGTGGGAGAGGAAGAAGAAGAAGAAGAACAAATGGAGGAGATTACCAACACACCACAAAGTGGATGGTTTAGGAATGTTGAGGAGCCATGGTTGAATAGTAGATCTCAAAAGAAGAAGAAAAATCAAGTGTTTCTTGAAGGGTATGTAGAAAATTCAGATGAAGATGAATTAGGGAGGACAAAGAGTTTGACTGATGATGATTTA</genome_strand>
        <mrna_strand>GAAGAAAAAAAAATGGAACCTTTTATCTC-TCTATCATCAAGATCCAGGTCTTGTGAGAGCTTTTTTACTGATGGTGTTGAGCAAATACCAGGGGAAGTACTGGGAGAGGAAGAACAACAAGAACACCCAATGGAGGAGATTACCCACACACCACAAAGTGGATGGTTTAGGAATGTTGAGGAGCCATGGTTGAATACTAGATCTCAAAAGAAGAAGAAAAATCAAGTGTTTCTTGAAGGGCATGTACAAAATTCCCATGAAGATGAATTAGGGAGGACAACCAGTTTGACTGATGATGATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E238628" ref_strand="+" ref_description="SGN-E238628 [cLEL-9-A1](-)">
      <seq>attcaaccatggctcctcaacattcctaaaccatccactttgtggtgtgttggtaatctcctccatttgttcttcttcttcttcttcctctcccactacttcccctggtatttgctcaacaccatcattaaaaaagctctcacaagacctggatcttgatgatagatgagaaaaagtttccatttttttatcttccaaacttttttgagtgttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="60928" stop="61741"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61228" g_stop="61441" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="214" r_length="214" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E238628" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>214</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E238628" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61228" e_stop="61441"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCAACCATGGCTCCTCAACATTCCTAAACCATCCACTTTGTGGTGTGTTGGTAATCTCCTCCATTTGTTCTTCTTCTTCTTCTTCCTCTCCCACTACTTCCCCTGGTATTTGCTCAACACCATCATTAAAAAAGCTCTCACAAGACCTGGATCTTGATGATAGATGAGAAAAAGTTTCCATTTTTTTTTCTTCCAAACTTTTTTGAGTGTTT</genome_strand>
        <mrna_strand>ATTCAACCATGGCTCCTCAACATTCCTAAACCATCCACTTTGTGGTGTGTTGGTAATCTCCTCCATTTGTTCTTCTTCTTCTTCTTCCTCTCCCACTACTTCCCCTGGTATTTGCTCAACACCATCATTAAAAAAGCTCTCACAAGACCTGGATCTTGATGATAGATGAGAAAAAGTTTCCATTTTTTTATCTTCCAAACTTTTTTGAGTGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E392218" ref_strand="+" ref_description="SGN-E392218 [TUS-36-C20]">
      <seq>gtcctatacaatttattttttcagaatgcccatttggagtttgtagaagttttgaatgtgaaagaacaagttgtttctggaatgatgtactatataacacttgtggcaactgatgatggaaataaaaaagattatgaagccaagatttgggtgaaggaatgggaggacttcaagaaagttataagcttcaagcttgttggtaaggatagtgcaataattgggggctttaccgatgttccattcccaaacaaacgcgagttccaagatcttacacgttttgctattcaggattataataagaaagaggttatttacaatgacttactcatcttctattttttcctgttaatttcatattcaaatttataatattttaattttgaacccattgcatgagatatctaataattatttcatttgaatgaacgtcatatacaatttatttttcagaatgcccatttggagtttgtagaaaatctgaatgtgaaaaaacaagttgttgctggaatgttgtactatataacatttgcagcaactgatgctggaaagaaaaacatatatgaaacaaagatttgggtgaaggaatgggaagacttcaaaaaagttgtagagttcaagcttgttggtgatgatggtgcaaagctgggggggattatcaatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="67022" stop="68283"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67322" g_stop="67983" g_length="662"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="662" r_length="662" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E392218" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E392218" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67322" e_stop="67983"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCTATACAATTTATTTTTTCAGAATGCCCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAAGAACAAGTTGTTTCTGGAATGATGTACTATATAACACTTGTGGCAACTGATGATGGAAATAAAAAAGATTATGAAGCCAAGATTTGGGTGAAGGAATGGGAGGACTTCAAGAAAGTTATAAGCTTCAAGCTTGTTGGTAAGGATAGTGCAATAATTGGGGGCTTTACCGATGTTCCATTCCCAAACAAACGCGAGTTCCAAGATCTTACACGTTTTGCTATTCAGGATTATAATAAGAAAGAGGTTATTTACAATGACTTACTCATCTTCTATTTTTTCCTGTTAATTTCATATTCAAATTTATAATATTTTAATTTTGAACCCATTGCATGAGATATCTAATAATTATTTCATTTGAATGAACGTCATATACAATTTATTTTTCAGAATGCCCATTTGGAGTTTGTAGAAAATCTGAATGTGAAAAAACAAGTTGTTGCTGGAATGTTGTACTATATAACATTTGCAGCAACTGATGCTGGAAAGAAAAACATATATGAAACAAAGATTTGGGTGAAGGAATGGGAAGACTTCAAAAAAGTTGTAGAGTTCAAGCTTGTTGGTGATGATGGTGCAAAGCTTGGGGGGATTATCAATGT</genome_strand>
        <mrna_strand>GTCCTATACAATTTATTTTTTCAGAATGCCCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAAGAACAAGTTGTTTCTGGAATGATGTACTATATAACACTTGTGGCAACTGATGATGGAAATAAAAAAGATTATGAAGCCAAGATTTGGGTGAAGGAATGGGAGGACTTCAAGAAAGTTATAAGCTTCAAGCTTGTTGGTAAGGATAGTGCAATAATTGGGGGCTTTACCGATGTTCCATTCCCAAACAAACGCGAGTTCCAAGATCTTACACGTTTTGCTATTCAGGATTATAATAAGAAAGAGGTTATTTACAATGACTTACTCATCTTCTATTTTTTCCTGTTAATTTCATATTCAAATTTATAATATTTTAATTTTGAACCCATTGCATGAGATATCTAATAATTATTTCATTTGAATGAACGTCATATACAATTTATTTTTCAGAATGCCCATTTGGAGTTTGTAGAAAATCTGAATGTGAAAAAACAAGTTGTTGCTGGAATGTTGTACTATATAACATTTGCAGCAACTGATGCTGGAAAGAAAAACATATATGAAACAAAGATTTGGGTGAAGGAATGGGAAGACTTCAAAAAAGTTGTAGAGTTCAAGCTTGTTGGTGATGATGGTGCAAAGCTGGGGGGGATTATCAATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E232888" ref_strand="+" ref_description="SGN-E232888 [cLED-8-O12]">
      <seq>tcctatacaatttattttttcagaatgcccatttggagtttgtagaagttttgaatgtgaaagaacaagttgattctggaatgatgtactatataacacttgtggcaactgatgatggaaataaaaaagattatgaagccaagatttgggtgaaggaatgggaggacttcaagaaagttataagcttcaagcttgttggtaaggatagtgcaataattgggggctttaccgatgttccattcccaaacaaacgcgagttccaagatcttacacgttttgctattcaggattataataagaaagaggttatttacaatgacttactcatcttctattttttcctgttaattacatattcaaatttataatatattaattttgaacccattgcatgagatatctaataatcatttcatgtgaatgaacgtcatatacaatttatttttcagaatgcccatttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="67023" stop="68084"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67323" g_stop="67784" g_length="462"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="462" r_length="462" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E232888" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>462</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E232888" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67323" e_stop="67784"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTATACAATTTATTTTTTCAGAATGCCCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAAGAACAAGTTGTTTCTGGAATGATGTACTATATAACACTTGTGGCAACTGATGATGGAAATAAAAAAGATTATGAAGCCAAGATTTGGGTGAAGGAATGGGAGGACTTCAAGAAAGTTATAAGCTTCAAGCTTGTTGGTAAGGATAGTGCAATAATTGGGGGCTTTACCGATGTTCCATTCCCAAACAAACGCGAGTTCCAAGATCTTACACGTTTTGCTATTCAGGATTATAATAAGAAAGAGGTTATTTACAATGACTTACTCATCTTCTATTTTTTCCTGTTAATTTCATATTCAAATTTATAATATTTTAATTTTGAACCCATTGCATGAGATATCTAATAATTATTTCATTTGAATGAACGTCATATACAATTTATTTTTCAGAATGCCCATTTGG</genome_strand>
        <mrna_strand>TCCTATACAATTTATTTTTTCAGAATGCCCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAAGAACAAGTTGATTCTGGAATGATGTACTATATAACACTTGTGGCAACTGATGATGGAAATAAAAAAGATTATGAAGCCAAGATTTGGGTGAAGGAATGGGAGGACTTCAAGAAAGTTATAAGCTTCAAGCTTGTTGGTAAGGATAGTGCAATAATTGGGGGCTTTACCGATGTTCCATTCCCAAACAAACGCGAGTTCCAAGATCTTACACGTTTTGCTATTCAGGATTATAATAAGAAAGAGGTTATTTACAATGACTTACTCATCTTCTATTTTTTCCTGTTAATTACATATTCAAATTTATAATATATTAATTTTGAACCCATTGCATGAGATATCTAATAATCATTTCATGTGAATGAACGTCATATACAATTTATTTTTCAGAATGCCCATTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E239896" ref_strand="+" ref_description="SGN-E239896 [cLED-29-A17]">
      <seq>tcctatacaatttattttttcagaatgcccatttggagtttgtagaagttttgaatgtgaaagaacaagttgtttctggaatgatgtactatataacacttgtggcaactgatgatggaaataaaaaagattatgaagccaagatttgggtgaaggaatgggaggacttcaagaaagttataagcttcaagcttgttggtaaggatagtgcaataattgggggctttaccgatgttccattcccaaacaaacgcgagttccaagatcttacacgttttgctattcaggattataataagaaagaggttatttacaatgacttactcatcttctattttttcctgttaatttcatattcaaatttataatattttaattttgaacccattgcatgagatatctaataattatttcatttgaatgaacgtcatatacaatttatttttcagaatgcccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="67023" stop="68080"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67323" g_stop="67780" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="458" r_length="458" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E239896" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>458</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E239896" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67323" e_stop="67780"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTATACAATTTATTTTTTCAGAATGCCCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAAGAACAAGTTGTTTCTGGAATGATGTACTATATAACACTTGTGGCAACTGATGATGGAAATAAAAAAGATTATGAAGCCAAGATTTGGGTGAAGGAATGGGAGGACTTCAAGAAAGTTATAAGCTTCAAGCTTGTTGGTAAGGATAGTGCAATAATTGGGGGCTTTACCGATGTTCCATTCCCAAACAAACGCGAGTTCCAAGATCTTACACGTTTTGCTATTCAGGATTATAATAAGAAAGAGGTTATTTACAATGACTTACTCATCTTCTATTTTTTCCTGTTAATTTCATATTCAAATTTATAATATTTTAATTTTGAACCCATTGCATGAGATATCTAATAATTATTTCATTTGAATGAACGTCATATACAATTTATTTTTCAGAATGCCCAT</genome_strand>
        <mrna_strand>TCCTATACAATTTATTTTTTCAGAATGCCCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAAGAACAAGTTGTTTCTGGAATGATGTACTATATAACACTTGTGGCAACTGATGATGGAAATAAAAAAGATTATGAAGCCAAGATTTGGGTGAAGGAATGGGAGGACTTCAAGAAAGTTATAAGCTTCAAGCTTGTTGGTAAGGATAGTGCAATAATTGGGGGCTTTACCGATGTTCCATTCCCAAACAAACGCGAGTTCCAAGATCTTACACGTTTTGCTATTCAGGATTATAATAAGAAAGAGGTTATTTACAATGACTTACTCATCTTCTATTTTTTCCTGTTAATTTCATATTCAAATTTATAATATTTTAATTTTGAACCCATTGCATGAGATATCTAATAATTATTTCATTTGAATGAACGTCATATACAATTTATTTTTCAGAATGCCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E231111" ref_strand="+" ref_description="SGN-E231111 [cLED-5-N8]">
      <seq>tcctatacaatttattttttcagaatgcccatttggagtttgtagaagttttgaatgtgaaagaacaagttgtttctggaatgatgtactatataacacttgtggcaactgatgatggaaataaaaaagattatgaagccaagatttgggtgaaggaatgggaggacttcaagaaagttataagcttcaagcttgttggtaaggatagtgcaataattgggggctttaccgatgttccattcccaaacaaacgcgagttccaagatcttacacgttttgctattcaggattataataagaaagaggttatttacaatgacttactcatcttctatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="67023" stop="67960"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67323" g_stop="67660" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="338" r_length="338" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E231111" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>338</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E231111" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67323" e_stop="67660"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTATACAATTTATTTTTTCAGAATGCCCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAAGAACAAGTTGTTTCTGGAATGATGTACTATATAACACTTGTGGCAACTGATGATGGAAATAAAAAAGATTATGAAGCCAAGATTTGGGTGAAGGAATGGGAGGACTTCAAGAAAGTTATAAGCTTCAAGCTTGTTGGTAAGGATAGTGCAATAATTGGGGGCTTTACCGATGTTCCATTCCCAAACAAACGCGAGTTCCAAGATCTTACACGTTTTGCTATTCAGGATTATAATAAGAAAGAGGTTATTTACAATGACTTACTCATCTTCTATTTT</genome_strand>
        <mrna_strand>TCCTATACAATTTATTTTTTCAGAATGCCCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAAGAACAAGTTGTTTCTGGAATGATGTACTATATAACACTTGTGGCAACTGATGATGGAAATAAAAAAGATTATGAAGCCAAGATTTGGGTGAAGGAATGGGAGGACTTCAAGAAAGTTATAAGCTTCAAGCTTGTTGGTAAGGATAGTGCAATAATTGGGGGCTTTACCGATGTTCCATTCCCAAACAAACGCGAGTTCCAAGATCTTACACGTTTTGCTATTCAGGATTATAATAAGAAAGAGGTTATTTACAATGACTTACTCATCTTCTATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E471198" ref_strand="+" ref_description="SGN-E471198 [cSTB-23-K11]">
      <seq>agaatgctcatctggagtttgtagaaaatttgaatgtgaaaaaacaagttgttgctggaatgttgtactacataacatttgcggcaacagatggtggaaagaaaaaaatatatgaaactaagatttgggttaaggtatgggagaacttcaagaaagttgttgaattcaagcttgttggtgatgatagtgcaaagcttgggggcattatcaatgttccattcccaaacaaccccgaattccaagatcttgctcgttttgctgttcaagattataataagaaagagaatgctcatttggagtttgtagaaaatttgaatgtgaaagaacaacttgttgctggaatgttatactacataacacttgtggcaattgatgctggaaagaaaaaaatatatgaagctaagatttgggttaaggaatgggagaacttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="67470" stop="69229"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67770" g_stop="68053" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="284" r_length="284" r_score="0.915"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68054" i_stop="68781" i_length="728">
            <donor d_prob="0.979" d_score="0.90"/>
            <acceptor a_prob="0.945" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68782" g_stop="68929" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="432" r_length="148" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E471198" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>432</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E471198" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67770" e_stop="68053"/>
          <exon e_start="68782" e_stop="68929"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAATGCCCATTTGGAGTTTGTAGAAAATCTGAATGTGAAAAAACAAGTTGTTGCTGGAATGTTGTACTATATAACATTTGCAGCAACTGATGCTGGAAAGAAAAACATATATGAAACAAAGATTTGGGTGAAGGAATGGGAAGACTTCAAAAAAGTTGTAGAGTTCAAGCTTGTTGGTGATGATGGTGCAAAGCTTGGGGGGATTATCAATGTTCCATTCCCAAACAGCCCCGAGTTTCAAGATCTTGCTCGTTTTGCGGTTCAGGATTATAATAATAAAGAGGTTAATTAAAATGATTTACTATTATTTTATTTTTTACACAACAAGAAAACTGTGATGAGAAAAACTGTGAATTAAATAGGGATTTTCCTGGGATTAGCATGAAAATTCACAGGAAATTTATTATCCTGCAAATTTTCATACTAATTCGCAGGAAAATCCCCATGTAATCCACAGTTTTCTTGTAGTACATGGGACATACTAATTTGCAGGAAAATAAGTTTCTTGCGAATTTTCATATTAATTCCCAGAAAATCACAGTTTTTTTATGCGTTTGTTAGTTTCAGATTCAAACAAATCGTATTCAAATTTTGAATCCATAATGGCATATATAATCAATTTTTCAGAAGGCTCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAGGAACAAGTTGTTGCTGGAATGATGTACTATATAACACTTGCGGTAACTGATGCTGGAAAGAAGAAAATATATGAAGCTAACATTTGGGTGAAAGAATGGGAGCACTTCATAAAAGTTGTGGAATTTAAGCCTGTTAGTGATGATAGTGTAAAAACTGGAGACATTGTCGATGTTCCAGATCCAAACATCCCCCCACTTCAAGATCTTGCTCGTTTTGCTGTGCAGGATTATAATAAGGCACAGGTTAATTATAATAACTTATCCTTCTTCTATTTTTCACATTTAAATTCTGAATCTACTGTAGTATCTAATAATTCTTTCATGTATATACCATCTATTTTTCAGAATGCTCATTTAGAGTATGTAGAAAACTTGAATGTGAAAGAACAACTTGTTGCTGGAACGTTATACTACATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATACGAAACTAAGATTTGGGTGAAGGAATGGGAGGACTTCA</genome_strand>
        <mrna_strand>AGAATGCTCATCTGGAGTTTGTAGAAAATTTGAATGTGAAAAAACAAGTTGTTGCTGGAATGTTGTACTACATAACATTTGCGGCAACAGATGGTGGAAAGAAAAAAATATATGAAACTAAGATTTGGGTTAAGGTATGGGAGAACTTCAAGAAAGTTGTTGAATTCAAGCTTGTTGGTGATGATAGTGCAAAGCTTGGGGGCATTATCAATGTTCCATTCCCAAACAACCCCGAATTCCAAGATCTTGCTCGTTTTGCTGTTCAAGATTATAATAAGAAAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCTCATTTGGAGTTTGTAGAAAATTTGAATGTGAAAGAACAACTTGTTGCTGGAATGTTATACTACATAACACTTGTGGCAATTGATGCTGGAAAGAAAAAAATATATGAAGCTAAGATTTGGGTTAAGGAATGGGAGAACTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E747597" ref_strand="+" ref_description="SGN-E747597 [GI|3452386]">
      <seq>ggcacgagagaaggctcatttggagtttgtagaagttttgaatgtgaaggaacaagttgttgctggaatgatgtactatataacacttgcggtaactgatgctggaaagaagaaaatatatgaagctaacatttgggtgaaagaatgggagcacttcataaaagttgtggaatttaagcctgttagtgatgatagtgtaaaaactggagacattgtcgatgttccagatccaaacatccccccacttcaagatcttgctcgttttgctgtgcaggattataataaggcacagaatgctcatttagagtatgtagaaaacttgaatgtgaaagaacaacttgttgctggaacgttatactacataacacttgtggcaactgatgctggaaagaagaaaatatacgaaactaagatttgggtgaaggaatgggaggacttcaaaaaagttgtagaattcaagcttgttggtgatgatagtccaaatcctgggggcattaccaatgttccattcccaaacctccccgagttcaaagatcttgctcgttttgctgttcaagattataataagaaagagaatgctcatttggagtttgtagaaaatttgaatgtgaaggaacaagttgttgctggaataatatactatataacacttgtggcaactgatgctggaaagaagaaaatatatgagaccaagattttggtgaagggatgggagaatttcaaggaagttcaagatttcaagcttgttggtgatgccatcaagtgaaatgaaactacttttatctttgcgtgaaataaagccacttgtttggcatgaagttattgttatgtttgtgacaaataaagccacttctttggcataaaattactattatgtttatgagaaataaaatcagatctatgtatagtatctgaaagtattcgattgtcttgttgtcaattgtatttgaataattttaagtttgtaagattgataaatgcatgtttatgggatgataaatattgtttgaatttaatattttattgctaatacgtatctaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="68096" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68398" g_stop="68679" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="292" r_length="282" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68680" i_stop="68781" i_length="102">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68782" g_stop="69063" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="574" r_length="282" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69064" i_stop="69144" i_length="81">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="69145" g_stop="69615" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="575" r_stop="1045" r_length="471" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="69616" i_stop="69941" i_length="326">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="69942" g_stop="69960" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="1046" r_stop="1064" r_length="19" r_score="0.737"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E747597" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1054</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E747597" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68398" e_stop="68679"/>
          <exon e_start="68782" e_stop="69063"/>
          <exon e_start="69145" e_stop="69615"/>
          <exon e_start="69942" e_stop="69960"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGCTCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAGGAACAAGTTGTTGCTGGAATGATGTACTATATAACACTTGCGGTAACTGATGCTGGAAAGAAGAAAATATATGAAGCTAACATTTGGGTGAAAGAATGGGAGCACTTCATAAAAGTTGTGGAATTTAAGCCTGTTAGTGATGATAGTGTAAAAACTGGAGACATTGTCGATGTTCCAGATCCAAACATCCCCCCACTTCAAGATCTTGCTCGTTTTGCTGTGCAGGATTATAATAAGGCACAGGTTAATTATAATAACTTATCCTTCTTCTATTTTTCACATTTAAATTCTGAATCTACTGTAGTATCTAATAATTCTTTCATGTATATACCATCTATTTTTCAGAATGCTCATTTAGAGTATGTAGAAAACTTGAATGTGAAAGAACAACTTGTTGCTGGAACGTTATACTACATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATACGAAACTAAGATTTGGGTGAAGGAATGGGAGGACTTCAAAAAAGTTGTAGAATTCAAGCTTGTTGGTGATGATAGTCCAAATCCTGGGGGCATTACCAATGTTCCATTCCCAAACCTCCCCGAGTTCAAAGATCTTGCTCGTTTTGCTGTTCAAGATTATAATAAGAAAGAGGTTAATCTCTTAATTTTGAATTTATTTTTTGTATCTAATAACTCTTTTATTTGAACGAACGACGTATGTTTTATTTTTCAGAATGCTCATTTGGAGTTTGTAGAAAATTTGAATGTGAAGGAACAAGTTGTTGCTGGAATAATATACTATATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATATGAGACCAAGATTTTGGTGAAGGGATGGGAGAATTTCAAGGAAGTTCAAGATTTCAAGCTTGTTGGTGATGCCACTAAGTGAAATGAAACTACTTTTATCTTTGCGTGAAATAAAGCCACTTGTTTGGCATGAAGTTATTGTTATGTTTGTGACAAATAAAGCCACTTCTTTGGCATAAAATTACTATTATGTTTATGAGAAATAAAATCAGATCTATGTATAGTATCTGAAAGTATTCGATTGTCTTGTTGTCAATTGTATTTGAATAATTTTAAGTTTGTAAGATTGATAAATGCATGTTTATGGGATGATAAATATTGTTTGAATTTAATATTTTATTGCTAATACGTATCTATATATATTTTTCTCTAAAATTTTTACTTAATTCAAATAAAATGTTTAGATGAAGCTAAATATATATATATATAAAAAGTTATAAACGAGAGTATATACATATCATTTATCATAGTTTAAAATAAAATTATTATATTTTCTTCTCCTTTTATATATTGATAGATATAATAAAATATTATATTTTTCAGTTGAAAGTTCTCTACACAAAATGTCATATTGCACTAACTATATATGCAAATAATTAATTGAACAAGTTGTAAGTAATATAATTGATAATTAATTGAACAAGTCGTAAGTAAATAATTAATTAGACAAATACGAAGTGTTATTTTAAACACTAATAAAAAACAA</genome_strand>
        <mrna_strand>AAGGCTCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAGGAACAAGTTGTTGCTGGAATGATGTACTATATAACACTTGCGGTAACTGATGCTGGAAAGAAGAAAATATATGAAGCTAACATTTGGGTGAAAGAATGGGAGCACTTCATAAAAGTTGTGGAATTTAAGCCTGTTAGTGATGATAGTGTAAAAACTGGAGACATTGTCGATGTTCCAGATCCAAACATCCCCCCACTTCAAGATCTTGCTCGTTTTGCTGTGCAGGATTATAATAAGGCACAG......................................................................................................AATGCTCATTTAGAGTATGTAGAAAACTTGAATGTGAAAGAACAACTTGTTGCTGGAACGTTATACTACATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATACGAAACTAAGATTTGGGTGAAGGAATGGGAGGACTTCAAAAAAGTTGTAGAATTCAAGCTTGTTGGTGATGATAGTCCAAATCCTGGGGGCATTACCAATGTTCCATTCCCAAACCTCCCCGAGTTCAAAGATCTTGCTCGTTTTGCTGTTCAAGATTATAATAAGAAAGAG.................................................................................AATGCTCATTTGGAGTTTGTAGAAAATTTGAATGTGAAGGAACAAGTTGTTGCTGGAATAATATACTATATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATATGAGACCAAGATTTTGGTGAAGGGATGGGAGAATTTCAAGGAAGTTCAAGATTTCAAGCTTGTTGGTGATGCCATCAAGTGAAATGAAACTACTTTTATCTTTGCGTGAAATAAAGCCACTTGTTTGGCATGAAGTTATTGTTATGTTTGTGACAAATAAAGCCACTTCTTTGGCATAAAATTACTATTATGTTTATGAGAAATAAAATCAGATCTATGTATAGTATCTGAAAGTATTCGATTGTCTTGTTGTCAATTGTATTTGAATAATTTTAAGTTTGTAAGATTGATAAATGCATGTTTATGGGATGATAAATATTGTTTGAATTTAATATTTTATTGCTAATACGTATCTAAAAAA......................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E239556" ref_strand="+" ref_description="SGN-E239556 [cLED-23-M13]">
      <seq>tcatttggagtttgtagaagttttgaatgtgaaggaacaagttgttgctggaatgatgtactatataacacttgcggtaactgatgctggaaagaagaaaatatatgaagctaacatttgggtgaaagaatgggagcacttcataaaagttgtggaatttaagcctgttagtgatgatagtgtaaaaactggagacattgtcgatgttccagatccaaacatccccccacttcaagatcttgctcgttttgctgtgcaggattataataaggcacagaatgctcatttagagtatgtagaaaacttgaatgtgaaagaacaacttgttgctggaacgttatactacataacacttgtggcaactgatgctggaaagaagaaaatatacgaaactaagatttgggtgaaggaatgggaggacttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="68103" stop="69229"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68403" g_stop="68679" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="277" r_length="277" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68680" i_stop="68781" i_length="102">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68782" g_stop="68929" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="425" r_length="148" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E239556" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>425</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E239556" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68403" e_stop="68679"/>
          <exon e_start="68782" e_stop="68929"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAGGAACAAGTTGTTGCTGGAATGATGTACTATATAACACTTGCGGTAACTGATGCTGGAAAGAAGAAAATATATGAAGCTAACATTTGGGTGAAAGAATGGGAGCACTTCATAAAAGTTGTGGAATTTAAGCCTGTTAGTGATGATAGTGTAAAAACTGGAGACATTGTCGATGTTCCAGATCCAAACATCCCCCCACTTCAAGATCTTGCTCGTTTTGCTGTGCAGGATTATAATAAGGCACAGGTTAATTATAATAACTTATCCTTCTTCTATTTTTCACATTTAAATTCTGAATCTACTGTAGTATCTAATAATTCTTTCATGTATATACCATCTATTTTTCAGAATGCTCATTTAGAGTATGTAGAAAACTTGAATGTGAAAGAACAACTTGTTGCTGGAACGTTATACTACATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATACGAAACTAAGATTTGGGTGAAGGAATGGGAGGACTTCA</genome_strand>
        <mrna_strand>TCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAGGAACAAGTTGTTGCTGGAATGATGTACTATATAACACTTGCGGTAACTGATGCTGGAAAGAAGAAAATATATGAAGCTAACATTTGGGTGAAAGAATGGGAGCACTTCATAAAAGTTGTGGAATTTAAGCCTGTTAGTGATGATAGTGTAAAAACTGGAGACATTGTCGATGTTCCAGATCCAAACATCCCCCCACTTCAAGATCTTGCTCGTTTTGCTGTGCAGGATTATAATAAGGCACAG......................................................................................................AATGCTCATTTAGAGTATGTAGAAAACTTGAATGTGAAAGAACAACTTGTTGCTGGAACGTTATACTACATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATACGAAACTAAGATTTGGGTGAAGGAATGGGAGGACTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E747225" ref_strand="+" ref_description="SGN-E747225 [GI|6671195]">
      <seq>gctcatttagagtatgtagaaaacttgaatgtgaaagaacaacttgttgctggaacgttatactacataacacttgtggcaactgatgctggaaagaagaaaatatacgaaactaagatttgggtgaaggaatgggaggacttcaaaaaagttgtagaattcaagcttgttggtgatgatagtccaaatcctgggggcattaccaatgttccattcccaaacctcccccagttcaaagatcttgctcgttttgctgttcaagattataataagaaagagaatgctcatttggagtttgtagaaaatttgaatgtgaaggaacaagttgttgctggaataatatactatataacgcttgtggcaactgatgctggaaagaagaaaatatatgagaccaagattttggtgaagggatgggagaatttcaaggaagttcaagaattcaagcttgttggtgatgccactaagtgaaatgaaactaattttatctctgtgtgaaataaagccacttgcttggcaggaagttattggtatgtttgtgacaaataaagtcacttctttggcataaaattactattatgtttatgagaaataaaaccagatctatgtatagtatctggaagtatttgattgtcttgttgtaaattgnatttgaataatttaaagtctgtaagattgataaatgttgtttgaatttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="68485" stop="73370"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68785" g_stop="69063" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="279" r_length="279" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69064" i_stop="69144" i_length="81">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69145" g_stop="69549" g_length="405"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="684" r_length="405" r_score="0.960"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69550" i_stop="69928" i_length="379">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="69929" g_stop="69959" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="685" r_stop="715" r_length="31" r_score="0.677"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E747225" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E747225" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68785" e_stop="69063"/>
          <exon e_start="69145" e_stop="69549"/>
          <exon e_start="69929" e_stop="69959"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTCATTTAGAGTATGTAGAAAACTTGAATGTGAAAGAACAACTTGTTGCTGGAACGTTATACTACATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATACGAAACTAAGATTTGGGTGAAGGAATGGGAGGACTTCAAAAAAGTTGTAGAATTCAAGCTTGTTGGTGATGATAGTCCAAATCCTGGGGGCATTACCAATGTTCCATTCCCAAACCTCCCCGAGTTCAAAGATCTTGCTCGTTTTGCTGTTCAAGATTATAATAAGAAAGAGGTTAATCTCTTAATTTTGAATTTATTTTTTGTATCTAATAACTCTTTTATTTGAACGAACGACGTATGTTTTATTTTTCAGAATGCTCATTTGGAGTTTGTAGAAAATTTGAATGTGAAGGAACAAGTTGTTGCTGGAATAATATACTATATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATATGAGACCAAGATTTTGGTGAAGGGATGGGAGAATTTCAAGGAAGTTCAAGATTTCAAGCTTGTTGGTGATGCCACTAAGTGAAATGAAACTACTTTTATCTTTGCGTGAAATAAAGCCACTTGTTTGGCATGAAGTTATTGTTATGTTTGTGACAAATAAAGCCACTTCTTTGGCATAAAATTACTATTATGTTTATGAGAAATAAAATCAGATCTATGTATAGTATCTGAAAGTATTCGATTGTCTTGTTGTCAATTGTATTTGAATAATTTTAAGTTTGTAAGATTGATAAATGCATGTTTATGGGATGATAAATATTGTTTGAATTTAATATTTTATTGCTAATACGTATCTATATATATTTTTCTCTAAAATTTTTACTTAATTCAAATAAAATGTTTAGATGAAGCTAAATATATATATATATAAAAAGTTATAAACGAGAGTATATACATATCATTTATCATAGTTTAAAATAAAATTATTATATTTTCTTCTCCTTTTATATATTGATAGATATAATAAAATATTATATTTTTCAGTTGAAAGTTCTCTACACAAAATGTCATATTGCACTAACTATATATGCAAATAATTAATTGAACAAGTTGTAAGTAATATAATTGATAATTAATTGAACAAGTCGTAAGTAAATAATTAATTAGACAAATACGAAGTGTTATTTTAAACACTAATAAAAAACA</genome_strand>
        <mrna_strand>GCTCATTTAGAGTATGTAGAAAACTTGAATGTGAAAGAACAACTTGTTGCTGGAACGTTATACTACATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATACGAAACTAAGATTTGGGTGAAGGAATGGGAGGACTTCAAAAAAGTTGTAGAATTCAAGCTTGTTGGTGATGATAGTCCAAATCCTGGGGGCATTACCAATGTTCCATTCCCAAACCTCCCCCAGTTCAAAGATCTTGCTCGTTTTGCTGTTCAAGATTATAATAAGAAAGAG.................................................................................AATGCTCATTTGGAGTTTGTAGAAAATTTGAATGTGAAGGAACAAGTTGTTGCTGGAATAATATACTATATAACGCTTGTGGCAACTGATGCTGGAAAGAAGAAAATATATGAGACCAAGATTTTGGTGAAGGGATGGGAGAATTTCAAGGAAGTTCAAGAATTCAAGCTTGTTGGTGATGCCACTAAGTGAAATGAAACTAATTTTATCTCTGTGTGAAATAAAGCCACTTGCTTGGCAGGAAGTTATTGGTATGTTTGTGACAAATAAAGTCACTTCTTTGGCATAAAATTACTATTATGTTTATGAGAAATAAAACCAGATCTATGTATAGTATCTGGAAGTATTTGATTGTCTTGTTGTAAATTGNATTTGAATAATTTAAAGTCTGTAAGATTGATAAAT...........................................................................................................................................................................................................................................................................................................................................................................................GTTGTTTGAATTTAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E395118" ref_strand="+" ref_description="SGN-E395118 [TUS-37-K19]">
      <seq>gcaactgatgctggaaagaagaaaatatacgaaactaagatttgggtgaaggaatgggaggacttcaaaaaagttgtagaattcaagcttgttggtgatgatagtccaaatcctgggggcattaccaatgttccattcccaaacctcccccagttcaaagatcttgctcgttttgctgttcaagattataataagaaagagaatgctcatttggagtttgtagaaaatttgaatgtgaaggaacaagttgttgctggaataatatactatataacgcttgtggcaactgatgctggaaagaagaaaatatatgagaccaagattttggtgaagggatgggagaatttcaaggaagttcaagaattcaagcttgttggtgatgccactaagtgaaatgaaactaattttatctctgtgtgaaataaagccacttgcttggcaggaagttattgttatgtttgtgacaaataaagtcactttcttttggcataaattactattatggtttatgaaaaaattaaacccaattctatgtatagtatctgggaagtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="68563" stop="69791"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68863" g_stop="69063" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="201" r_length="201" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69064" i_stop="69144" i_length="81">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69145" g_stop="69491" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="553" r_length="352" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E395118" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>548</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E395118" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68863" e_stop="69063"/>
          <exon e_start="69145" e_stop="69491"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAACTGATGCTGGAAAGAAGAAAATATACGAAACTAAGATTTGGGTGAAGGAATGGGAGGACTTCAAAAAAGTTGTAGAATTCAAGCTTGTTGGTGATGATAGTCCAAATCCTGGGGGCATTACCAATGTTCCATTCCCAAACCTCCCCGAGTTCAAAGATCTTGCTCGTTTTGCTGTTCAAGATTATAATAAGAAAGAGGTTAATCTCTTAATTTTGAATTTATTTTTTGTATCTAATAACTCTTTTATTTGAACGAACGACGTATGTTTTATTTTTCAGAATGCTCATTTGGAGTTTGTAGAAAATTTGAATGTGAAGGAACAAGTTGTTGCTGGAATAATATACTATATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATATGAGACCAAGATTTTGGTGAAGGGATGGGAGAATTTCAAGGAAGTTCAAGATTTCAAGCTTGTTGGTGATGCCACTAAGTGAAATGAAACTACTTTTATCTTTGCGTGAAATAAAGCCACTTGTTTGGCATGAAGTTATTGTTATGTTTGTGACAAATAAAGCCAC-TTC-TTTGGCATAAAATTACTATTAT-GTTTATG-AGAAA-TAAAATCAGATCTATGTATAGTATCT-GAAAGTAT</genome_strand>
        <mrna_strand>GCAACTGATGCTGGAAAGAAGAAAATATACGAAACTAAGATTTGGGTGAAGGAATGGGAGGACTTCAAAAAAGTTGTAGAATTCAAGCTTGTTGGTGATGATAGTCCAAATCCTGGGGGCATTACCAATGTTCCATTCCCAAACCTCCCCCAGTTCAAAGATCTTGCTCGTTTTGCTGTTCAAGATTATAATAAGAAAGAG.................................................................................AATGCTCATTTGGAGTTTGTAGAAAATTTGAATGTGAAGGAACAAGTTGTTGCTGGAATAATATACTATATAACGCTTGTGGCAACTGATGCTGGAAAGAAGAAAATATATGAGACCAAGATTTTGGTGAAGGGATGGGAGAATTTCAAGGAAGTTCAAGAATTCAAGCTTGTTGGTGATGCCACTAAGTGAAATGAAACTAATTTTATCTCTGTGTGAAATAAAGCCACTTGCTTGGCAGGAAGTTATTGTTATGTTTGTGACAAATAAAGTCACTTTCTTTTGGCAT-AAATTACTATTATGGTTTATGAAAAAATTAAACCCAATTCTATGTATAGTATCTGGGAAGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E243418" ref_strand="+" ref_description="SGN-E243418 [cLED-34-M9]">
      <seq>caactgatgctggaaagaagaaaatatacgaaactaagatttgggtgaaggaatgggaggacttcaaaaaagttgtagaattcaagcttgttggtgatgatagtccaaatcctgggggcattaccaatgttccattcccaaacctcccccagttcaaagatcttgctcgttttgctgttcaagattataataagaaagagaatgctcatttggagtttgtagaaaatttgaatgtgaaggaacaagttgttgctggaataatatactatataacgcttgtggcaactgatgctggaaagaagaaaatatatgagaccaagattttggtgaagggatgggagaatttcaaggaagttcaagaattcaagcttgttggtgatgccactaagtgaaatgaaactaattttatctctgtgtgaaataaagccacttgcttggcaggaagttattgttatgtttgtgacaaataaagtcacttctttggcataaaattactattatgtttatgagaaataaaaccagatctatgtatagtatctggaagtatttgattgtcttgttgtaaattgtatttgaataatttaaagtctgtaagattgataaatgcatgtttatgggatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="68564" stop="69865"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68864" g_stop="69063" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="200" r_length="200" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69064" i_stop="69144" i_length="81">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69145" g_stop="69565" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="621" r_length="421" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E243418" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>621</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E243418" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68864" e_stop="69063"/>
          <exon e_start="69145" e_stop="69565"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACTGATGCTGGAAAGAAGAAAATATACGAAACTAAGATTTGGGTGAAGGAATGGGAGGACTTCAAAAAAGTTGTAGAATTCAAGCTTGTTGGTGATGATAGTCCAAATCCTGGGGGCATTACCAATGTTCCATTCCCAAACCTCCCCGAGTTCAAAGATCTTGCTCGTTTTGCTGTTCAAGATTATAATAAGAAAGAGGTTAATCTCTTAATTTTGAATTTATTTTTTGTATCTAATAACTCTTTTATTTGAACGAACGACGTATGTTTTATTTTTCAGAATGCTCATTTGGAGTTTGTAGAAAATTTGAATGTGAAGGAACAAGTTGTTGCTGGAATAATATACTATATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATATGAGACCAAGATTTTGGTGAAGGGATGGGAGAATTTCAAGGAAGTTCAAGATTTCAAGCTTGTTGGTGATGCCACTAAGTGAAATGAAACTACTTTTATCTTTGCGTGAAATAAAGCCACTTGTTTGGCATGAAGTTATTGTTATGTTTGTGACAAATAAAGCCACTTCTTTGGCATAAAATTACTATTATGTTTATGAGAAATAAAATCAGATCTATGTATAGTATCTGAAAGTATTCGATTGTCTTGTTGTCAATTGTATTTGAATAATTTTAAGTTTGTAAGATTGATAAATGCATGTTTATGGGATG</genome_strand>
        <mrna_strand>CAACTGATGCTGGAAAGAAGAAAATATACGAAACTAAGATTTGGGTGAAGGAATGGGAGGACTTCAAAAAAGTTGTAGAATTCAAGCTTGTTGGTGATGATAGTCCAAATCCTGGGGGCATTACCAATGTTCCATTCCCAAACCTCCCCCAGTTCAAAGATCTTGCTCGTTTTGCTGTTCAAGATTATAATAAGAAAGAG.................................................................................AATGCTCATTTGGAGTTTGTAGAAAATTTGAATGTGAAGGAACAAGTTGTTGCTGGAATAATATACTATATAACGCTTGTGGCAACTGATGCTGGAAAGAAGAAAATATATGAGACCAAGATTTTGGTGAAGGGATGGGAGAATTTCAAGGAAGTTCAAGAATTCAAGCTTGTTGGTGATGCCACTAAGTGAAATGAAACTAATTTTATCTCTGTGTGAAATAAAGCCACTTGCTTGGCAGGAAGTTATTGTTATGTTTGTGACAAATAAAGTCACTTCTTTGGCATAAAATTACTATTATGTTTATGAGAAATAAAACCAGATCTATGTATAGTATCTGGAAGTATTTGATTGTCTTGTTGTAAATTGTATTTGAATAATTTAAAGTCTGTAAGATTGATAAATGCATGTTTATGGGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E368511" ref_strand="+" ref_description="SGN-E368511 [TUS-23-H6]">
      <seq>caactgatgctggaaagaataaaatatactaaactaagatttgggtgaaggaatgggaggacttcaaaaaagttgtagaattcaagcttgttggtgatgatagtccaaatcctgggggcattaccaatgttccattcccaaacctcccccagttcaaagatcttgctcgttttgctgttcaagattataataagaaagagaatgctcatttggagtttgtagaaaatttgaatgtgaaggaacaagttgttgctggaataatatactatataacgcttgtggcaactgatgctggaaagaagaaaatatatgagaccaagattttggtgaagggatgggagaatttcaaggaagttcaagaattcaagcttgttggtgatgccactaagtgaaatgaaactaattttatctctgtgtgaaataaagccactcgcttggcaggaagttatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="68564" stop="69694"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68864" g_stop="69063" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="200" r_length="200" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69064" i_stop="69144" i_length="81">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69145" g_stop="69394" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="450" r_length="250" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E368511" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>450</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E368511" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68864" e_stop="69063"/>
          <exon e_start="69145" e_stop="69394"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACTGATGCTGGAAAGAAGAAAATATACGAAACTAAGATTTGGGTGAAGGAATGGGAGGACTTCAAAAAAGTTGTAGAATTCAAGCTTGTTGGTGATGATAGTCCAAATCCTGGGGGCATTACCAATGTTCCATTCCCAAACCTCCCCGAGTTCAAAGATCTTGCTCGTTTTGCTGTTCAAGATTATAATAAGAAAGAGGTTAATCTCTTAATTTTGAATTTATTTTTTGTATCTAATAACTCTTTTATTTGAACGAACGACGTATGTTTTATTTTTCAGAATGCTCATTTGGAGTTTGTAGAAAATTTGAATGTGAAGGAACAAGTTGTTGCTGGAATAATATACTATATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATATGAGACCAAGATTTTGGTGAAGGGATGGGAGAATTTCAAGGAAGTTCAAGATTTCAAGCTTGTTGGTGATGCCACTAAGTGAAATGAAACTACTTTTATCTTTGCGTGAAATAAAGCCACTTGTTTGGCATGAAGTTATT</genome_strand>
        <mrna_strand>CAACTGATGCTGGAAAGAATAAAATATACTAAACTAAGATTTGGGTGAAGGAATGGGAGGACTTCAAAAAAGTTGTAGAATTCAAGCTTGTTGGTGATGATAGTCCAAATCCTGGGGGCATTACCAATGTTCCATTCCCAAACCTCCCCCAGTTCAAAGATCTTGCTCGTTTTGCTGTTCAAGATTATAATAAGAAAGAG.................................................................................AATGCTCATTTGGAGTTTGTAGAAAATTTGAATGTGAAGGAACAAGTTGTTGCTGGAATAATATACTATATAACGCTTGTGGCAACTGATGCTGGAAAGAAGAAAATATATGAGACCAAGATTTTGGTGAAGGGATGGGAGAATTTCAAGGAAGTTCAAGAATTCAAGCTTGTTGGTGATGCCACTAAGTGAAATGAAACTAATTTTATCTCTGTGTGAAATAAAGCCACTCGCTTGGCAGGAAGTTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E402751" ref_strand="+" ref_description="SGN-E402751 [PPC-8-J9]">
      <seq>gtgcaaaacctgggggcattatcattgttccattcccaaacagtcctgagttccaagatcttgctcgttttgctattcaagattttaataagaaagagaatggtcatttggagtttgtagaaaatttgaatgtgaaggaacaagttgttgctggaatgatgtactatataacacttgcggcaactgatgctagaaagaaggaaatatatgagaccaagattttggtgaaggaatgggagaatttcaaggaagttcaagaattcaagcttgttggtgatgctacaaagtgaaatgaaactacttttatgttggtgtgaaataaagccagttgtttggtatgaagttattataatgtttgtgagaaataaagccaattgtttggcataaaattactattatgtttgtgagaaataaaatcagatctatgtatctgaaagtatttgattgtcttattgtaaccgtatttgaataatattttgttttcagaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="68666" stop="69776"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68966" g_stop="69063" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="0.888"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69064" i_stop="69144" i_length="81">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69145" g_stop="69534" g_length="390"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="482" r_length="384" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="485" polyA_stop="497"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E402751" ref_strand="+">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E402751" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68966" e_stop="69063"/>
          <exon e_start="69145" e_stop="69534"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCAAATCCTGGGGGCATTACCAATGTTCCATTCCCAAACCTCCCCGAGTTCAAAGATCTTGCTCGTTTTGCTGTTCAAGATTATAATAAGAAAGAGGTTAATCTCTTAATTTTGAATTTATTTTTTGTATCTAATAACTCTTTTATTTGAACGAACGACGTATGTTTTATTTTTCAGAATGCTCATTTGGAGTTTGTAGAAAATTTGAATGTGAAGGAACAAGTTGTTGCTGGAATAATATACTATATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATATGAGACCAAGATTTTGGTGAAGGGATGGGAGAATTTCAAGGAAGTTCAAGATTTCAAGCTTGTTGGTGATGCCACTAAGTGAAATGAAACTACTTTTATCTTTGCGTGAAATAAAGCCACTTGTTTGGCATGAAGTTATTGTTATGTTTGTGACAAATAAAGCCACTTCTTTGGCATAAAATTACTATTATGTTTATGAGAAATAAAATCAGATCTATGTATAGTATCTGAAAGTATTCGATTGTCTTGTTGTCAATTGTATTTGAATAATTTTAAGTTT</genome_strand>
        <mrna_strand>GTGCAAAACCTGGGGGCATTATCATTGTTCCATTCCCAAACAGTCCTGAGTTCCAAGATCTTGCTCGTTTTGCTATTCAAGATTTTAATAAGAAAGAG.................................................................................AATGGTCATTTGGAGTTTGTAGAAAATTTGAATGTGAAGGAACAAGTTGTTGCTGGAATGATGTACTATATAACACTTGCGGCAACTGATGCTAGAAAGAAGGAAATATATGAGACCAAGATTTTGGTGAAGGAATGGGAGAATTTCAAGGAAGTTCAAGAATTCAAGCTTGTTGGTGATGCTACAAAGTGAAATGAAACTACTTTTATGTTGGTGTGAAATAAAGCCAGTTGTTTGGTATGAAGTTATTATAATGTTTGTGAGAAATAAAGCCAATTGTTTGGCATAAAATTACTATTATGTTTGTGAGAAATAAAATCAGATC----TAT-GTATCTGAAAGTATTTGATTGTCTTATTGT-AACCGTATTTGAATAATATTTTGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E215344" ref_strand="+" ref_description="SGN-E215344 [cLEL-20-O3](-)">
      <seq>aaagaagaaaatatatgagcccaagattttggtgaagggatgggagaatttcaaggaagttcaagaattcaagcttgttggtgatgccactaagtgaaatgaaactaattttatctctgtgtgaaataaagccacttgcttggcaggaagttattgttatgtttgtgacaaataaagtcacttctttggcataaaattactattatgtttatgagaaataaaaccagatctatgtatagtatctggaagtatttgattgtcttgttgtaaattgtatttgaataatttaaagtctgtaagattgataaatgcatgtttatgggatgataaatgttgtttgaatttaatactttattgttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="68940" stop="69902"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69240" g_stop="69599" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="360" r_length="360" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="361" polyA_stop="376"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E215344" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>360</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E215344" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69240" e_stop="69599"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAAGAAAATATATGAGACCAAGATTTTGGTGAAGGGATGGGAGAATTTCAAGGAAGTTCAAGATTTCAAGCTTGTTGGTGATGCCACTAAGTGAAATGAAACTACTTTTATCTTTGCGTGAAATAAAGCCACTTGTTTGGCATGAAGTTATTGTTATGTTTGTGACAAATAAAGCCACTTCTTTGGCATAAAATTACTATTATGTTTATGAGAAATAAAATCAGATCTATGTATAGTATCTGAAAGTATTCGATTGTCTTGTTGTCAATTGTATTTGAATAATTTTAAGTTTGTAAGATTGATAAATGCATGTTTATGGGATGATAAATATTGTTTGAATTTAATATTTTATTGCTA</genome_strand>
        <mrna_strand>AAAGAAGAAAATATATGAGCCCAAGATTTTGGTGAAGGGATGGGAGAATTTCAAGGAAGTTCAAGAATTCAAGCTTGTTGGTGATGCCACTAAGTGAAATGAAACTAATTTTATCTCTGTGTGAAATAAAGCCACTTGCTTGGCAGGAAGTTATTGTTATGTTTGTGACAAATAAAGTCACTTCTTTGGCATAAAATTACTATTATGTTTATGAGAAATAAAACCAGATCTATGTATAGTATCTGGAAGTATTTGATTGTCTTGTTGTAAATTGTATTTGAATAATTTAAAGTCTGTAAGATTGATAAATGCATGTTTATGGGATGATAAATGTTGTTTGAATTTAATACTTTATTGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E215440" ref_strand="+" ref_description="SGN-E215440 [cLEL-20-O3](-)">
      <seq>aagcttgttggtgatgccactaagtgaaatgaaactaattttatctctgtgtgaaataaagccacttgcttggcaggaagttattgttatgtttgtgacaaataaagtcacttctttggcataaaattactattatgtttatgagaaataaaaccagatctatgtatagtatctggaagtatttgattgtcttgttgtaaattgtatttgaataatttaaagtctgtaagattgataaatgcatgtttatgggatgataaatgttgtttgaatttaatactttattgttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="69010" stop="69902"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69310" g_stop="69599" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="290" r_length="290" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="291" polyA_stop="306"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E215440" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>290</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E215440" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69310" e_stop="69599"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTTGTTGGTGATGCCACTAAGTGAAATGAAACTACTTTTATCTTTGCGTGAAATAAAGCCACTTGTTTGGCATGAAGTTATTGTTATGTTTGTGACAAATAAAGCCACTTCTTTGGCATAAAATTACTATTATGTTTATGAGAAATAAAATCAGATCTATGTATAGTATCTGAAAGTATTCGATTGTCTTGTTGTCAATTGTATTTGAATAATTTTAAGTTTGTAAGATTGATAAATGCATGTTTATGGGATGATAAATATTGTTTGAATTTAATATTTTATTGCTA</genome_strand>
        <mrna_strand>AAGCTTGTTGGTGATGCCACTAAGTGAAATGAAACTAATTTTATCTCTGTGTGAAATAAAGCCACTTGCTTGGCAGGAAGTTATTGTTATGTTTGTGACAAATAAAGTCACTTCTTTGGCATAAAATTACTATTATGTTTATGAGAAATAAAACCAGATCTATGTATAGTATCTGGAAGTATTTGATTGTCTTGTTGTAAATTGTATTTGAATAATTTAAAGTCTGTAAGATTGATAAATGCATGTTTATGGGATGATAAATGTTGTTTGAATTTAATACTTTATTGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E431189" ref_strand="+" ref_description="SGN-E431189 [STM-55-E19]">
      <seq>ataaagagcaatgaggatgtttcaaatgttgatgtgattagtgcaaaggatctgctctcttcaggtcacacttatttagatgtgaggacagttgaagagtataatagaggacatattgataaagccataaatattccatacatgtttctcaatgaacaaggaagggtgaaaaatccagattttcttgagcaagtctcttcagtgtgccaaaaggaggatcatctgattgtgggatgcaacagtggagggagaggacttcgagcatgtgtcgatctgcttaatgcggggtacaaggatgtaagaaacttggaaggaggatactcagcatgggtagataatgagtttaaaggagatgaagctgctcaacagttcaaaactgcctgcaaatttcgtccatgattgcttcaacattcacaagaattattttctatgctttttataagtggtcacatataatggggaaaaaaattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="73644" stop="70588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73481" g_stop="73474" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="8" r_length="8" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73473" i_stop="73339" i_length="135">
            <donor d_prob="0.974" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73338" g_stop="73261" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="86" r_length="78" r_score="0.962"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73260" i_stop="73146" i_length="115">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73145" g_stop="73072" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="160" r_length="74" r_score="0.973"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="73071" i_stop="72964" i_length="108">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="72963" g_stop="72893" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="231" r_length="71" r_score="0.986"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="72892" i_stop="72309" i_length="584">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.640" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="72308" g_stop="72255" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="285" r_length="54" r_score="0.944"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="72254" i_stop="71052" i_length="1203">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.887" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="71051" g_stop="70905" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="431" r_length="146" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E431189" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>432</cumulative_length_of_scored_exons>
        <coverage percentage="0.917" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E431189" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73481" e_stop="73474"/>
          <exon e_start="73338" e_stop="73261"/>
          <exon e_start="73145" e_stop="73072"/>
          <exon e_start="72963" e_stop="72893"/>
          <exon e_start="72308" e_stop="72255"/>
          <exon e_start="71051" e_stop="70905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAAAGAGGTAATTTACGCAAAATTCTAATGCTTAATTCTATTGTTAATCGATCATTATACTAATTTATTTTTAATCAATTTTATTATTTTGATCGATTGTTATAATTTTTATCCATCTTATAATTATTTTTTTTGTACGCAGCAATGAGGATGTTTCAAATGTTGATGTGATTAGTGCAAAAGATCTGCTCTCTTCGGGTCACACTTATTTAGACGTGAGGTGAGTAATTAAAAAAAAATTGTAAAAAACAAAATCTAGTAAAAGTAAACTAATTTGTATTATTTTTGGAAATCTTGATAATTCAATTTCATTATTTTTGGGGTTTAATTTACAGGACAACTGAAGAGTATAATAGAGGACATATTGATAAAGCCATAAATATTCCATACATGTTTCTCAATGAACAAGGTTTTTTTTTTTTTTTTAATTTTCATTATTTTTGTGTTTTTTTTTTCTTATACACTATTTTCTATTGTGAGCCAATTTTTTTTTTTTTTGTTTTTTTATTTTTGCTAGGAAGGGTGAAAAATCCAGATTTTCTTGAGCAAGTCTCTGCAGTGTGCCAAAAGGAGGATCATCTGATTGTGGTAAATTAACTCATAAACATTTTAACTTTCTTTTAATTTTACTAATTATATATATTTATAACGACAAAAGCTACTCCCTTCGTACGGTATTATTTGTCATGGTTTTTATTTTTAGAGTCAAACTATAAAAACTTTGACTAACATTTTAAGACGTATTTTTTCATCATATTAATATGTAAAAATTTGCAATTTATAGTACATTTCATATAGTTTTGCAATATCTATTTTTTTTATTCAAAATATCAAATTAATATGATCTAATTGAACCTTGAAAATTAGTCAAATTTGACTTTCGAAAAAAGTAACATGACAAACAATACCGAACGGAGGGAGTATTTATATCATAGTTAGTAGGTTATTTGTCATTTATCTTTAAGGCTTATTAAATAGAGTTACATGCCTATATATAATATTATCTTTTAAATAACTTAATTTTGAACGACTCTCAGAGTAAATATTAAATCCATGAATATATAACTTCAGAAATGAATTCTATAATAAATAGACGTAATAATTAAGTTAAACCTATAAAATTTAAATTTTGATTACGTCTTTTTAGTCGGTGAGTAAGATCTGTTTTGAAGGGATGTAACAGTGGAGGGAGAGGACTTCGAGCATGCGTCGATCTCCTTAATGCGGTTAGTGAGCCTTTCAATTTCCCATTTATATATTTATTTAAAAAAAATGACAGTTCAATGCATAAAATATATTATTTTAGTAGGATTTAGAAAAAAGTGGCATTTAAAAAATGTGATGTAGAAAGTCTATTCTAATGCAAATATTAGTGGCTGAAAGTTAACTTTATTTCAATTTGAATTTAGTCTACATGAATAAAAATTTATTTTTTCAAAAAAATACTAGTGTTTTACTATACACGGGGGAATCGGTTGAACTCAGTAACTTTTACTTAGTATATTTGAATTAAGAAGTTTATTAAATATGTACAAGTATTATGTTTAAACACCAATTATTAGAGTCCGGAGCCTAAAGGGTAAAAAATGTTAACAAAAATTCCAAAACGGTATATGAAATTTCTTTTTAACCAAAAGAGCAAAATCGCTCGCGAAGTAGCGATTTTGTCCACTGAAAAAAGCAAAATCGCTGCTATAGCAGCGATTTATTAAATTTGCTTTTTAAAAAAAAAAAATCATAACAAAATCGCTCCCTCGGGAGCAATTTTCAAAATAATTTTTTTTGTTAATATTTTTTTGATATGTCGCTGCTTAGGCAGCGACTTGTGTATAATTTTTTTTAATTAATATTTTTTGTTTTTTTTTATAAAAAAAGTTTAAATCAATTTTTTAAATCAAATAGCTGCCAAAGCAATGATTTTTAATTAATTTTTTTTTTAAAAAAATAAATAAATCGCTGCCATTTTTTTTAGTGATTTAATTTTTAAAAATTAAAAAAGAAATAATTAAAAATTGCAGCAATGTAATTTTAAAAAAATATTTTTTTCATTTAAACTTTTTTAAATAAAAAAAGTAAAAAAAAAAATTAAGGTAATGTCGCTGCATAAGCAGCGACTTACTTAAAAAGGTATAAAAAATTTTTTGAAAGGGAGCGATTTTGTTTTAATTTTATTTTTTTAAAAAAAATCAAATTTAACAAAATCGCTGCTATAGCAGCGATTTTGTTTTTTCCAATGGACAAAATCGCTACTTCGCAAGCGATTTTGCCCTTTTGGTTTAAAATAAATTTCATATACCATTTTAGAATTTTTGTTAATATTTTATACCCTTTAGGCTTCGGACTCCCAATTATTAACACTTGAAATTATCGCACGTAATAAAATTCAGAACCATAAAAATTTAAAATTCTAATTTCGCGTGCGAGTGTAGGGGTACAAGGATGTAAGAAACTTGGAAGGAGGATACTCAGCATGGGTGGATAATGAGTTTAAAGGGGATGAATCTGCTCAACAGTTCAAAACTGCCTGCAAATTTCGTCCATGAGCAAAACATGCATTCACAAGAATTATTTTCTAT</genome_strand>
        <mrna_strand>ATAAAGAG.......................................................................................................................................CAATGAGGATGTTTCAAATGTTGATGTGATTAGTGCAAAGGATCTGCTCTCTTCAGGTCACACTTATTTAGATGTGAG...................................................................................................................GACAGTTGAAGAGTATAATAGAGGACATATTGATAAAGCCATAAATATTCCATACATGTTTCTCAATGAACAAG............................................................................................................GAAGGGTGAAAAATCCAGATTTTCTTGAGCAAGTCTCTTCAGTGTGCCAAAAGGAGGATCATCTGATTGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGCAACAGTGGAGGGAGAGGACTTCGAGCATGTGTCGATCTGCTTAATGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTACAAGGATGTAAGAAACTTGGAAGGAGGATACTCAGCATGGGTAGATAATGAGTTTAAAGGAGATGAAGCTGCTCAACAGTTCAAAACTGCCTGCAAATTTCGTCCATGATTGCTTCA-ACATTCACAAGAATTATTTTCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E746343" ref_strand="+" ref_description="SGN-E746343 [GI|47104711]">
      <seq>tttctacatcatctttactttaagaaaactaaaagaaatggcatctctgatctctagctgggcttcacaagtgaacactgtgcctgaaaggtatgtggtgcctactgagaaaagattgaatgtaaatgtcccaattggtaaagacattccagttattgatttgtcacatcctaattctgccctcatagctgaacaaatcatcaaagcttctcaagactatggagtttttcaggtgattaaccatggagtgtcacaagagttgattggtgatgtccttgaagtttgtgatgaatttttcaagttgccaattgaggacttggaaaagtatactgaagaagaagagttgagtgaatttgagccaaatcttgaccagaaaccaaagctttatattgaaaaggaatataagcctaagaagaatggtaagaatgataaagaagtcattttttggaaagacacttttgctcattgtactcatcctaccaaagaagatagaattaattcttggcctgaaaagccagcaaaatatagggaagtgattggaaaatatagtgagggagtgaggaaggcaaatttgagaattttggagctaatgtgtgaaggattgggacttgaaaaggattactttgcaaatgagctgagccatattcagtatatggctataaacctttacccaaaatgccccgacccgactgtaacagctggagccgtggaacataatgacggcggagtcatcaacttgcttttacaagaattgggcggcttacatgtgcgccgtcagaaagatggacagtggcttgctgttgagcccattcctggtgcattggtttgcatcaatggcatgattttgaaggtgattagcaatgggaagttagaaagtggaatacatagagtggctacaaattcagtgagagatagaatatctcttggatgtttaactagtccttcttgtgatggaaaatgcataattgagcctgctaaaccacttttaagtgaaactaatccacctaaatacaagtcattttcctacactgagtatttgaagattttcttcagtgacacctctgaatttgaagctgcactcaatccatacaaaatttaattaattaatttatcactatgggataaattgatgtgtttctttattttggaggtaccaaaaataatcattgatgaataaattttgtgtgtgtgtgtgtgtttattaatgttatgttttggattttcaataatttcatgctactatgtattgtactacttccttttgtaatagtgatttgagtttgtgatataaataaaacaatttcaataaataaaggtgtgtttgaagaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77252" stop="73845"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76952" g_stop="76721" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="232" r_length="232" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76720" i_stop="76266" i_length="455">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76265" g_stop="75970" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="528" r_length="296" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75969" i_stop="75651" i_length="319">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75650" g_stop="75329" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="850" r_length="322" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75328" i_stop="74624" i_length="705">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74623" g_stop="74146" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="851" r_stop="1328" r_length="478" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1329" polyA_stop="1348"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E746343" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1328</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E746343" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76952" e_stop="76721"/>
          <exon e_start="76265" e_stop="75970"/>
          <exon e_start="75650" e_stop="75329"/>
          <exon e_start="74623" e_stop="74146"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTACATCATCTTTACTTTAAGAAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAGGTAATATAATTATAGAGTTTTAAGTTTTATGTACTGATAGTGAAAAAAATATTTATACAATCAGGTCATTTAAAATGTAATTGCATGATACTTATTATATTTATGTTGGTGGAGGTAGTGACTTCCATGTAATTAGTCGAGAAGTGTATGCAAACTGATACAGACATCACGATGTAATTGCGAGTAGCTTTATTTAAACATTCATTGATAATTAACCTACGATAAGAAAATGTTGTTATAGAGAATGTAGTATGACATGAAAGATTGGGTCCACTGAAAAAAATTTGATTGTTATAGTGAAATATTGTTAAAGAGAGGTTTTTTTGACTGTACAAGCAAGTAACTTGTTATTACAGGTTAGGTTTAACTGATAATAGTGTGTACTAGTTACATGCACTGTCAACGTATATAAATTAAATCGATAATTATATTGTTGTTTATGATGTCATTATTAGGTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAGGTAAGTATTAAATATAATATCTTCTCTATTTCATTTCGTTTTGACCTGCACGTGAAAATTCTTTTTAATTTTGGGTGACGGTGTGATTCAATCTCAGGACGTCTGTCTGCTCTGCTATCATGTAATAATAATACCTGAGTCTAACTCAACCCCAAAAGCTAGCTCATGAAAGAGACCAAATTCTCATCGATAGTGAAACTTTTTAACAATATTAACTAGACATTAATAATTTTTTTAAAAGAATTTTTTATTTTATATATATTTAATATCTAATTCGCAATGAAATGTCTCACGATTATTACTATATTTTATTTACTAGGGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGAGCCATATTCAGTATATGGCTATAAACCTTTACCCAAAATGCCCCGACCCGACTGTAACAGCTGGAGCCGTGGAACATAATGACGGCGGAGTCATCAACTTGCTTTTACAAGAATTGGGCGGCTTACATGTGCGCCGTCAGAAAGATGGACAGTGGCTTGCTGTTGAGCCCATTCCTGGTGCATTGGTTTGCATCAATGGCATGATTTTGAAGGTATTTCCCAAGTTTTTGACGTGACACAAAAATTTTCGTATAATTTAAAATATATCATTATATATTTGCGTTATTATGAATAGAATATTTATTTTTATTAAATTTAAAAATATATCGCTTTTTTAAATCTGTATAAAAAGAAAAACGAGTCATATAATTAAAATTGATGCAGGTGAGTAAGACATAAGCATTTTTGTTGGAATGTAAAGCTGATTTAATATCCGATAATAGATATTAGTAGGGGAGTTAGAATTTTTATTAAGAAGGTTAAAAATATGAAATAGTTAAGGGGATTCAACATTTGTTATTTACGCATAAAATACTCCATCTGTCTTATTTTATGTAAGATAGTTGGACTCAAGACACGGAATTTAAAAAAGAAAAAAAGACTTTTAAAACTTATGGTCTAAAATGGATGATAAAAATTTGTATTGCTATAAATCATTTCATTCATTAGGGTAAAATAAATATTATAAAATTAAATTGATTCTTAATATAAAAATGTGTCATTTTTTTTGAATTAATTAAAAATAAAATAAATCATATAAATTGTGACAGAAAAATTAATTTAATATAATTTTTTATCGAAGGTAATTCAGATGAACCTCTGGACCCTTACTTGTAAGATCCTTTTGTCAATTGTTTTATTTTTTTTATAGGTCAATGTAAAATATGACTAAATTGTCAATTAATTTTTTAACTCAGGTGATTAGCAATGGGAAGTTAGAAAGTGGAATACATAGAGTGGCTACAAATTCAGTGAGAGATAGAATATCTCTTGGATGTTTAACTAGTCCTTCTTGTGATGGAAAATGCATAATTGAGCCTGCTAAACCACTTTTAAGTGAAACTAATCCACCTAAATACAAGTCATTTTCCTACACTGAGTATTTGAAGATTTTCTTCAGTGACACCTCTGAATTTGAAGCTGCACTCAATCCATACAAAATTTAATTAATTAATTTATCACTATGGGATAAATTGATGTGTTTCTTTATTTTGGAGGTACCAAAAATAATCATTGATGAATAAATTTTGTGTGTGTGTGTGTGTTTATTAATGTTATGTTTTGGATTTTCAATAATTTCATGCTACTATGTATTGTACTACTTCCTTTTGTAATAGTGATTTGAGTTTGTGATATAAATAAAACAATTTCAATAAATAAAGGTGTGTTTGAAGA</genome_strand>
        <mrna_strand>TTTCTACATCATCTTTACTTTAAGAAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAG...............................................................................................................................................................................................................................................................................................................................GGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGAGCCATATTCAGTATATGGCTATAAACCTTTACCCAAAATGCCCCGACCCGACTGTAACAGCTGGAGCCGTGGAACATAATGACGGCGGAGTCATCAACTTGCTTTTACAAGAATTGGGCGGCTTACATGTGCGCCGTCAGAAAGATGGACAGTGGCTTGCTGTTGAGCCCATTCCTGGTGCATTGGTTTGCATCAATGGCATGATTTTGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAGCAATGGGAAGTTAGAAAGTGGAATACATAGAGTGGCTACAAATTCAGTGAGAGATAGAATATCTCTTGGATGTTTAACTAGTCCTTCTTGTGATGGAAAATGCATAATTGAGCCTGCTAAACCACTTTTAAGTGAAACTAATCCACCTAAATACAAGTCATTTTCCTACACTGAGTATTTGAAGATTTTCTTCAGTGACACCTCTGAATTTGAAGCTGCACTCAATCCATACAAAATTTAATTAATTAATTTATCACTATGGGATAAATTGATGTGTTTCTTTATTTTGGAGGTACCAAAAATAATCATTGATGAATAAATTTTGTGTGTGTGTGTGTGTTTATTAATGTTATGTTTTGGATTTTCAATAATTTCATGCTACTATGTATTGTACTACTTCCTTTTGTAATAGTGATTTGAGTTTGTGATATAAATAAAACAATTTCAATAAATAAAGGTGTGTTTGAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E573866" ref_strand="-" ref_description="SGN-E573866 [33244]">
      <seq>agagaattttggaactaatgtgtgaaagattgggacttgaaaaggattactttgcaatgagctgaccatattcagtatatggctatcaacctttacccaaaatgccccgacccgactgtaacggctggagccgtggaacataatgacggcggagtcatcaacttgcttttacaagaattgggcggcttacatgtgcgccgtcaaaaagatggacagtggcttgctgttgagcccattcctggtgcattggtttgcatcaatggcatggttttgaaggtgataagcaatgggaagttagaaagtggaatacatagagtggctacaaattcagtgagagatagaatatctcttggatgtttaactagtcctgcttgttatggagaatgcataattgaaccagctaaagcacttttaagtgaaactaatcctcctaaatacaagccattttcatacactgagtatttgaagattttcttcactgacacttctgaatttgaagctgcactcaatccatacaaaatttaattaatttatcactatgggataaattgatgtgtttcttgattttggatgtaccaaaaataatccttgtggaataattgtgtgtgagtgtgtttttatgttatgttttgaattttcaataatttatgctactatgtattgtacttcctttgtaatagtgattgagtttgtgatataaattaaacaattttaatggataaagatgtgttgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="75905" stop="73848"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75606" g_stop="75329" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="276" r_length="276" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75328" i_stop="74624" i_length="705">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74623" g_stop="74148" g_length="476"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="735" r_length="459" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E573866" ref_strand="-">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>754</cumulative_length_of_scored_exons>
        <coverage percentage="1.026" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E573866" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="75606" e_stop="75329"/>
          <exon e_start="74623" e_stop="74148"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGAGCCATATTCAGTATATGGCTATAAACCTTTACCCAAAATGCCCCGACCCGACTGTAACAGCTGGAGCCGTGGAACATAATGACGGCGGAGTCATCAACTTGCTTTTACAAGAATTGGGCGGCTTACATGTGCGCCGTCAGAAAGATGGACAGTGGCTTGCTGTTGAGCCCATTCCTGGTGCATTGGTTTGCATCAATGGCATGATTTTGAAGGTATTTCCCAAGTTTTTGACGTGACACAAAAATTTTCGTATAATTTAAAATATATCATTATATATTTGCGTTATTATGAATAGAATATTTATTTTTATTAAATTTAAAAATATATCGCTTTTTTAAATCTGTATAAAAAGAAAAACGAGTCATATAATTAAAATTGATGCAGGTGAGTAAGACATAAGCATTTTTGTTGGAATGTAAAGCTGATTTAATATCCGATAATAGATATTAGTAGGGGAGTTAGAATTTTTATTAAGAAGGTTAAAAATATGAAATAGTTAAGGGGATTCAACATTTGTTATTTACGCATAAAATACTCCATCTGTCTTATTTTATGTAAGATAGTTGGACTCAAGACACGGAATTTAAAAAAGAAAAAAAGACTTTTAAAACTTATGGTCTAAAATGGATGATAAAAATTTGTATTGCTATAAATCATTTCATTCATTAGGGTAAAATAAATATTATAAAATTAAATTGATTCTTAATATAAAAATGTGTCATTTTTTTTGAATTAATTAAAAATAAAATAAATCATATAAATTGTGACAGAAAAATTAATTTAATATAATTTTTTATCGAAGGTAATTCAGATGAACCTCTGGACCCTTACTTGTAAGATCCTTTTGTCAATTGTTTTATTTTTTTTATAGGTCAATGTAAAATATGACTAAATTGTCAATTAATTTTTTAACTCAGGTGATTAGCAATGGGAAGTTAGAAAGTGGAATACATAGAGTGGCTACAAATTCAGTGAGAGATAGAATATCTCTTGGATGTTTAACTAGTCCTTCTTGTGATGGAAAATGCATAATTGAGCCTGCTAAACCACTTTTAAGTGAAACTAATCCACCTAAATACAAGTCATTTTCCTACACTGAGTATTTGAAGATTTTCTTCAGTGACACCTCTGAATTTGAAGCTGCACTCAATCCATACAAAATTTAATTAATTAATTTATCACTATGGGATAAATTGATGTGTTTCTTTATTTTGGAGGTACCAAAAATAATCATTGATGAATAAATTTTGTGTGTGTGTGTGTGTTTATTAATGTTATGTTTTGGATTTTCAATAATTTCATGCTACTATGTATTGTACTACTTCCTTTTGTAATAGTGATTTGAGTTTGTGATATAAATAAAACAATTTCAATAAATAAAGGTGTGTTTGAA</genome_strand>
        <mrna_strand>AGAGAATTTTGGAACTAATGTGTGAAAGATTGGGACTTGAAAAGGATTACTTTGC-AATGAGCTGA-CCATATTCAGTATATGGCTATCAACCTTTACCCAAAATGCCCCGACCCGACTGTAACGGCTGGAGCCGTGGAACATAATGACGGCGGAGTCATCAACTTGCTTTTACAAGAATTGGGCGGCTTACATGTGCGCCGTCAAAAAGATGGACAGTGGCTTGCTGTTGAGCCCATTCCTGGTGCATTGGTTTGCATCAATGGCATGGTTTTGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATAAGCAATGGGAAGTTAGAAAGTGGAATACATAGAGTGGCTACAAATTCAGTGAGAGATAGAATATCTCTTGGATGTTTAACTAGTCCTGCTTGTTATGGAGAATGCATAATTGAACCAGCTAAAGCACTTTTAAGTGAAACTAATCCTCCTAAATACAAGCCATTTTCATACACTGAGTATTTGAAGATTTTCTTCACTGACACTTCTGAATTTGAAGCTGCACTCAATCCATACAAAA--T--TTAATTAATTTATCACTATGGGATAAATTGATGTGTTTCTTGATTTTGGATGTACCAAAAATAATCCTTGTGGAAT-AA---T-TGTGTGTGAGTGTGTTT-TT-ATGTTATGTTTTGAATTTTCAATAATTT-ATGCTACTATGTATTG---TACTTCC-TTTGTAATAGTGA-TTGAGTTTGTGATATAAATTAAACAATTTTAATGGATAAAGATGTGTTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E575607" ref_strand="-" ref_description="SGN-E575607 [35257]">
      <seq>atattcagtatatggctatcaacctttaccctttatgccccgacccgactgtaacggctggagccgtggaacataatgacggcggagtcatcaacttgcttttacaagaattggccggcttacatgtgcgccgtcaaaaagatggacagtggcttgctgttgagcccattcctggtgcattggtttgcatcaatggcatggttttgaaggtgataagcaatgggaagttagaaagtggaatacatagagtggctacaaattcagtgagagatagaatatctcttggatgtttaactagtcctgcttgttatggagaatgcataattgaaccagctaaagcacttttaagtgaaactaatcctcctaaatacaagccattttcatacactgagtatttgaagattttcttcactgacactctctgaatttgaagctgcactcaatccatacaaaatttaattaatttatcactatgggataaattgatgtgtttcttgattttggatgtaccaaaaataatccttgtggaataattgtgtgtgagtgtgtttttatgttatgttttgaattttcaataattctatgctactatgtattgtacttcctttgtaatagtgattgagtttgtgatataaataaaacaattttaatgaaaaaacaccggaagaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="75837" stop="73860"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75537" g_stop="75329" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="209" r_length="209" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75328" i_stop="74624" i_length="705">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74623" g_stop="74159" g_length="465"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="659" r_length="450" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E575607" ref_strand="-">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>674</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E575607" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="75537" e_stop="75329"/>
          <exon e_start="74623" e_stop="74159"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATTCAGTATATGGCTATAAACCTTTACCCAAAATGCCCCGACCCGACTGTAACAGCTGGAGCCGTGGAACATAATGACGGCGGAGTCATCAACTTGCTTTTACAAGAATTGGGCGGCTTACATGTGCGCCGTCAGAAAGATGGACAGTGGCTTGCTGTTGAGCCCATTCCTGGTGCATTGGTTTGCATCAATGGCATGATTTTGAAGGTATTTCCCAAGTTTTTGACGTGACACAAAAATTTTCGTATAATTTAAAATATATCATTATATATTTGCGTTATTATGAATAGAATATTTATTTTTATTAAATTTAAAAATATATCGCTTTTTTAAATCTGTATAAAAAGAAAAACGAGTCATATAATTAAAATTGATGCAGGTGAGTAAGACATAAGCATTTTTGTTGGAATGTAAAGCTGATTTAATATCCGATAATAGATATTAGTAGGGGAGTTAGAATTTTTATTAAGAAGGTTAAAAATATGAAATAGTTAAGGGGATTCAACATTTGTTATTTACGCATAAAATACTCCATCTGTCTTATTTTATGTAAGATAGTTGGACTCAAGACACGGAATTTAAAAAAGAAAAAAAGACTTTTAAAACTTATGGTCTAAAATGGATGATAAAAATTTGTATTGCTATAAATCATTTCATTCATTAGGGTAAAATAAATATTATAAAATTAAATTGATTCTTAATATAAAAATGTGTCATTTTTTTTGAATTAATTAAAAATAAAATAAATCATATAAATTGTGACAGAAAAATTAATTTAATATAATTTTTTATCGAAGGTAATTCAGATGAACCTCTGGACCCTTACTTGTAAGATCCTTTTGTCAATTGTTTTATTTTTTTTATAGGTCAATGTAAAATATGACTAAATTGTCAATTAATTTTTTAACTCAGGTGATTAGCAATGGGAAGTTAGAAAGTGGAATACATAGAGTGGCTACAAATTCAGTGAGAGATAGAATATCTCTTGGATGTTTAACTAGTCCTTCTTGTGATGGAAAATGCATAATTGAGCCTGCTAAACCACTTTTAAGTGAAACTAATCCACCTAAATACAAGTCATTTTCCTACACTGAGTATTTGAAGATTTTCTTCAGTGACAC-CTCTGAATTTGAAGCTGCACTCAATCCATACAAAATTTAATTAATTAATTTATCACTATGGGATAAATTGATGTGTTTCTTTATTTTGGAGGTACCAAAAATAATCATTGATGAATAAATTTTGTGTGTGTGTGTGTGTTTATTAATGTTATGTTTTGGATTTTCAATAATTTCATGCTACTATGTATTGTACTACTTCCTTTTGTAATAGTGATTTGAGTTTGTGATATAAATAAAACAATTTCAATAAATAAAG</genome_strand>
        <mrna_strand>ATATTCAGTATATGGCTATCAACCTTTACCCTTTATGCCCCGACCCGACTGTAACGGCTGGAGCCGTGGAACATAATGACGGCGGAGTCATCAACTTGCTTTTACAAGAATTGGCCGGCTTACATGTGCGCCGTCAAAAAGATGGACAGTGGCTTGCTGTTGAGCCCATTCCTGGTGCATTGGTTTGCATCAATGGCATGGTTTTGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATAAGCAATGGGAAGTTAGAAAGTGGAATACATAGAGTGGCTACAAATTCAGTGAGAGATAGAATATCTCTTGGATGTTTAACTAGTCCTGCTTGTTATGGAGAATGCATAATTGAACCAGCTAAAGCACTTTTAAGTGAAACTAATCCTCCTAAATACAAGCCATTTTCATACACTGAGTATTTGAAGATTTTCTTCACTGACACTCTCTGAATTTGAAGCTGCACTCAATCCATACAAAA--T--TTAATTAATTTATCACTATGGGATAAATTGATGTGTTTCTTGATTTTGGATGTACCAAAAATAATCCTTGTGGAAT-AA---T-TGTGTGTGAGTGTGTTT-TT-ATGTTATGTTTTGAATTTTCAATAATTCTATGCTACTATGTATTG---TACTTCC-TTTGTAATAGTGA-TTGAGTTTGTGATATAAATAAAACAATTTTAATGAAAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E577078" ref_strand="-" ref_description="SGN-E577078 [32579]">
      <seq>cggagtcatcaacttgctttgacaagaattgggcggcttacatgtgcgccgtcaaaaagatggacagtggcttgctgttgagcccattcctggtgcattgctttgcatcaatggcatggttttgaagcggataagcaatgggaagttagaaagtggaatacatagagtggctacaaattcagtgagagatagaatatctcttggatgtttaactagtcctgcttgttatggagaatgcataattgaaccagctaaagcacttttaagtgaaactaatcctcctaaatacaagccattttcatacactgagtatttgaagattttcttcactgacacttctgaatttgaagctgcactcaatccatacaaaatttaattaatttatcactatgggataaattgatgtgtttcttgattttggaatgtaccaaaaataatccttgtggaataatttgtgtgtgagtgtgtttttatgtttatgttttgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="75755" stop="74025"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75455" g_stop="75329" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="127" r_length="127" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75328" i_stop="74624" i_length="705">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74623" g_stop="74255" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="488" r_length="361" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E577078" ref_strand="-">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="1.016" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E577078" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="75455" e_stop="75329"/>
          <exon e_start="74623" e_stop="74255"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGAGTCATCAACTTGCTTTTACAAGAATTGGGCGGCTTACATGTGCGCCGTCAGAAAGATGGACAGTGGCTTGCTGTTGAGCCCATTCCTGGTGCATTGGTTTGCATCAATGGCATGATTTTGAAGGTATTTCCCAAGTTTTTGACGTGACACAAAAATTTTCGTATAATTTAAAATATATCATTATATATTTGCGTTATTATGAATAGAATATTTATTTTTATTAAATTTAAAAATATATCGCTTTTTTAAATCTGTATAAAAAGAAAAACGAGTCATATAATTAAAATTGATGCAGGTGAGTAAGACATAAGCATTTTTGTTGGAATGTAAAGCTGATTTAATATCCGATAATAGATATTAGTAGGGGAGTTAGAATTTTTATTAAGAAGGTTAAAAATATGAAATAGTTAAGGGGATTCAACATTTGTTATTTACGCATAAAATACTCCATCTGTCTTATTTTATGTAAGATAGTTGGACTCAAGACACGGAATTTAAAAAAGAAAAAAAGACTTTTAAAACTTATGGTCTAAAATGGATGATAAAAATTTGTATTGCTATAAATCATTTCATTCATTAGGGTAAAATAAATATTATAAAATTAAATTGATTCTTAATATAAAAATGTGTCATTTTTTTTGAATTAATTAAAAATAAAATAAATCATATAAATTGTGACAGAAAAATTAATTTAATATAATTTTTTATCGAAGGTAATTCAGATGAACCTCTGGACCCTTACTTGTAAGATCCTTTTGTCAATTGTTTTATTTTTTTTATAGGTCAATGTAAAATATGACTAAATTGTCAATTAATTTTTTAACTCAGGTGATTAGCAATGGGAAGTTAGAAAGTGGAATACATAGAGTGGCTACAAATTCAGTGAGAGATAGAATATCTCTTGGATGTTTAACTAGTCCTTCTTGTGATGGAAAATGCATAATTGAGCCTGCTAAACCACTTTTAAGTGAAACTAATCCACCTAAATACAAGTCATTTTCCTACACTGAGTATTTGAAGATTTTCTTCAGTGACACCTCTGAATTTGAAGCTGCACTCAATCCATACAAAATTTAATTAATTAATTTATCACTATGGGATAAATTGATGTGTTTCTTTATTTTGG-AGGTACCAAAAATAATCATTGATGAATAAATTTTGTGTGTGTGTGTGTGTTTATTAATGTTATGTTTTGGA</genome_strand>
        <mrna_strand>CGGAGTCATCAACTTGCTTTGACAAGAATTGGGCGGCTTACATGTGCGCCGTCAAAAAGATGGACAGTGGCTTGCTGTTGAGCCCATTCCTGGTGCATTGCTTTGCATCAATGGCATGGTTTTGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGATAAGCAATGGGAAGTTAGAAAGTGGAATACATAGAGTGGCTACAAATTCAGTGAGAGATAGAATATCTCTTGGATGTTTAACTAGTCCTGCTTGTTATGGAGAATGCATAATTGAACCAGCTAAAGCACTTTTAAGTGAAACTAATCCTCCTAAATACAAGCCATTTTCATACACTGAGTATTTGAAGATTTTCTTCACTGACACTTCTGAATTTGAAGCTGCACTCAATCCATACAAAA--T--TTAATTAATTTATCACTATGGGATAAATTGATGTGTTTCTTGATTTTGGAATGTACCAAAAATAATCCTTGTGGAAT-AA-TTTGTGTGTGAGTGTGTTTTTA-T-GT-TTATGTTTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E268571" ref_strand="+" ref_description="SGN-E268571 [cLEI-13-D23]">
      <seq>aaatttgagaattttggagctaatgtgtgaaggattgggacttgaaaaggatgactttgcaaatgagctgagccatattcagtatatggctataaacctttacccaaaatgccccgacccgactgtaacagctggagccgtggaacataatgacggcggagtcatcaacttgcttttacaagaattgggcggcttacatgtgcgccgtcagaaagatggacagtggcttgctgttgagcccattcctggtgcattggtttgcatcaatggcatgattttgaaggtgattagcaatgggaagttagaaagtggaatacatagagtggctacaaattcagtgagagatagaatatctcttggatgtttaactagtccttcttgtgatggaaaatgcataattgagcctgctaaaccacttttaagtgaaactaatccacctaaatacaagtcattttcctacactgagtattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="75911" stop="74136"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75611" g_stop="75329" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="283" r_length="283" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75328" i_stop="74624" i_length="705">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74623" g_stop="74436" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="471" r_length="188" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E268571" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E268571" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75611" e_stop="75329"/>
          <exon e_start="74623" e_stop="74436"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGAGCCATATTCAGTATATGGCTATAAACCTTTACCCAAAATGCCCCGACCCGACTGTAACAGCTGGAGCCGTGGAACATAATGACGGCGGAGTCATCAACTTGCTTTTACAAGAATTGGGCGGCTTACATGTGCGCCGTCAGAAAGATGGACAGTGGCTTGCTGTTGAGCCCATTCCTGGTGCATTGGTTTGCATCAATGGCATGATTTTGAAGGTATTTCCCAAGTTTTTGACGTGACACAAAAATTTTCGTATAATTTAAAATATATCATTATATATTTGCGTTATTATGAATAGAATATTTATTTTTATTAAATTTAAAAATATATCGCTTTTTTAAATCTGTATAAAAAGAAAAACGAGTCATATAATTAAAATTGATGCAGGTGAGTAAGACATAAGCATTTTTGTTGGAATGTAAAGCTGATTTAATATCCGATAATAGATATTAGTAGGGGAGTTAGAATTTTTATTAAGAAGGTTAAAAATATGAAATAGTTAAGGGGATTCAACATTTGTTATTTACGCATAAAATACTCCATCTGTCTTATTTTATGTAAGATAGTTGGACTCAAGACACGGAATTTAAAAAAGAAAAAAAGACTTTTAAAACTTATGGTCTAAAATGGATGATAAAAATTTGTATTGCTATAAATCATTTCATTCATTAGGGTAAAATAAATATTATAAAATTAAATTGATTCTTAATATAAAAATGTGTCATTTTTTTTGAATTAATTAAAAATAAAATAAATCATATAAATTGTGACAGAAAAATTAATTTAATATAATTTTTTATCGAAGGTAATTCAGATGAACCTCTGGACCCTTACTTGTAAGATCCTTTTGTCAATTGTTTTATTTTTTTTATAGGTCAATGTAAAATATGACTAAATTGTCAATTAATTTTTTAACTCAGGTGATTAGCAATGGGAAGTTAGAAAGTGGAATACATAGAGTGGCTACAAATTCAGTGAGAGATAGAATATCTCTTGGATGTTTAACTAGTCCTTCTTGTGATGGAAAATGCATAATTGAGCCTGCTAAACCACTTTTAAGTGAAACTAATCCACCTAAATACAAGTCATTTTCCTACACTGAGTATTT</genome_strand>
        <mrna_strand>AAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATGACTTTGCAAATGAGCTGAGCCATATTCAGTATATGGCTATAAACCTTTACCCAAAATGCCCCGACCCGACTGTAACAGCTGGAGCCGTGGAACATAATGACGGCGGAGTCATCAACTTGCTTTTACAAGAATTGGGCGGCTTACATGTGCGCCGTCAGAAAGATGGACAGTGGCTTGCTGTTGAGCCCATTCCTGGTGCATTGGTTTGCATCAATGGCATGATTTTGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAGCAATGGGAAGTTAGAAAGTGGAATACATAGAGTGGCTACAAATTCAGTGAGAGATAGAATATCTCTTGGATGTTTAACTAGTCCTTCTTGTGATGGAAAATGCATAATTGAGCCTGCTAAACCACTTTTAAGTGAAACTAATCCACCTAAATACAAGTCATTTTCCTACACTGAGTATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E572349" ref_strand="+" ref_description="SGN-E572349 [31489]">
      <seq>gtgatgtcttaaagcttgtgatgaataatttcaagttgccaattgaggacttggaaaagtatactgaagaagaagagttgagtgaatttgagccaaatcttgaccagaagccaaagctttatattgaaaaaggaatataaacctaagaagaatggcaaaaatgataaagaagttattttctggaaagacacttttgctcattgtactcatcctaccaaagaagatagaattaattcttggcctgaaaagccagcacaatatagggaagtgattggaaaatatacggagggagtgaggaaggcaaatttgagaattttggagctaatgtgtgaaggattgggacttgaaaaggattactttgcaaatgagctgagccatattcagtatatggctatcaacctttacccaaaatgccccgacccgactgtaacggctggagccgtggaacacaatgacggcggcgtcatcaacttgcttttacaagaattgggcggcttacatgtgcgccgccaaaaagatggacagtggcttgctgttgagcctattcctggtgcattggtttgcatcaatggcatggttttgaaggtgataagcaatgggaaattagaaagtggaaatacatagagtggctacaaattcagtgacgagatagaatatctcttggatgtttaactaggtcctgctttgtatatggagaatgcataattgaaccagctaaagcactcttagtggaaactaatcctcctaaatacaaggccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="76503" stop="74222"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76231" g_stop="75970" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="263" r_length="263" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75969" i_stop="75651" i_length="319">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.968" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75650" g_stop="75329" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="585" r_length="322" r_score="0.969"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75328" i_stop="74624" i_length="705">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="74623" g_stop="74460" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="586" r_stop="754" r_length="169" r_score="0.860"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E572349" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>748</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E572349" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76231" e_stop="75970"/>
          <exon e_start="75650" e_stop="75329"/>
          <exon e_start="74623" e_stop="74460"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGATGTCCTTGAAGTTTGTGATGAAT-TTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTG-AAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAGGTAAGTATTAAATATAATATCTTCTCTATTTCATTTCGTTTTGACCTGCACGTGAAAATTCTTTTTAATTTTGGGTGACGGTGTGATTCAATCTCAGGACGTCTGTCTGCTCTGCTATCATGTAATAATAATACCTGAGTCTAACTCAACCCCAAAAGCTAGCTCATGAAAGAGACCAAATTCTCATCGATAGTGAAACTTTTTAACAATATTAACTAGACATTAATAATTTTTTTAAAAGAATTTTTTATTTTATATATATTTAATATCTAATTCGCAATGAAATGTCTCACGATTATTACTATATTTTATTTACTAGGGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGAGCCATATTCAGTATATGGCTATAAACCTTTACCCAAAATGCCCCGACCCGACTGTAACAGCTGGAGCCGTGGAACATAATGACGGCGGAGTCATCAACTTGCTTTTACAAGAATTGGGCGGCTTACATGTGCGCCGTCAGAAAGATGGACAGTGGCTTGCTGTTGAGCCCATTCCTGGTGCATTGGTTTGCATCAATGGCATGATTTTGAAGGTATTTCCCAAGTTTTTGACGTGACACAAAAATTTTCGTATAATTTAAAATATATCATTATATATTTGCGTTATTATGAATAGAATATTTATTTTTATTAAATTTAAAAATATATCGCTTTTTTAAATCTGTATAAAAAGAAAAACGAGTCATATAATTAAAATTGATGCAGGTGAGTAAGACATAAGCATTTTTGTTGGAATGTAAAGCTGATTTAATATCCGATAATAGATATTAGTAGGGGAGTTAGAATTTTTATTAAGAAGGTTAAAAATATGAAATAGTTAAGGGGATTCAACATTTGTTATTTACGCATAAAATACTCCATCTGTCTTATTTTATGTAAGATAGTTGGACTCAAGACACGGAATTTAAAAAAGAAAAAAAGACTTTTAAAACTTATGGTCTAAAATGGATGATAAAAATTTGTATTGCTATAAATCATTTCATTCATTAGGGTAAAATAAATATTATAAAATTAAATTGATTCTTAATATAAAAATGTGTCATTTTTTTTGAATTAATTAAAAATAAAATAAATCATATAAATTGTGACAGAAAAATTAATTTAATATAATTTTTTATCGAAGGTAATTCAGATGAACCTCTGGACCCTTACTTGTAAGATCCTTTTGTCAATTGTTTTATTTTTTTTATAGGTCAATGTAAAATATGACTAAATTGTCAATTAATTTTTTAACTCAGGTGATTAGCAATGGGAAGTTAGAAAGTGG-AATACATAGAGTGGCTACAAATTCAGTGA-GAGATAGAATATCTCTTGGATGTTTAACTA-GTCCTTC-TTGT-GATGGAAAATGCATAATTGAGCCTGCTAAACCACTTTTAAGTGAAACTAATCCACCTAAATACAA</genome_strand>
        <mrna_strand>GTGATGT-CTTAAAGCTTGTGATGAATAATTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAGCCAAAGCTTTATATTGAAAAAGGAATATAAACCTAAGAAGAATGGCAAAAATGATAAAGAAGTTATTTTCTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCACAATATAG...............................................................................................................................................................................................................................................................................................................................GGAAGTGATTGGAAAATATACGGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGAGCCATATTCAGTATATGGCTATCAACCTTTACCCAAAATGCCCCGACCCGACTGTAACGGCTGGAGCCGTGGAACACAATGACGGCGGCGTCATCAACTTGCTTTTACAAGAATTGGGCGGCTTACATGTGCGCCGCCAAAAAGATGGACAGTGGCTTGCTGTTGAGCCTATTCCTGGTGCATTGGTTTGCATCAATGGCATGGTTTTGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATAAGCAATGGGAAATTAGAAAGTGGAAATACATAGAGTGGCTACAAATTCAGTGACGAGATAGAATATCTCTTGGATGTTTAACTAGGTCCTGCTTTGTATATGGAGAATGCATAATTGAACCAGCTAAAGCACTCTTAGTGGAAACTAATCCTCCTAAATACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E265729" ref_strand="+" ref_description="SGN-E265729 [cLEI-11-A18]">
      <seq>tttttcaggtgattaaccatggagtgtcacaagagttgattggtgatgtccttgaagtttgtggtgaatttttcaagttgccgattgaggacttggaaaagtatactgaagaagaagagttgagtgaatttgagccaaatcttgaccagaaaccaaagctttatattgaaaaggaatataagcctaagaagaatggtaagaatgataaagaagtcattttttggaaagacacttttgctcattgtactcatcctaccaaagaagatagaattaattcttggcctgaaaagccagcaaaatatagggaagtgattggaaaatatagtgagggagtgaggaaggcaaatttgagaattttggagctaatgtgtgaaggattgggacttgaaaaggattactttgcaaatgagctgagccatattcagtatatggctataaacctttacccaaaatgccccgacccgactgtaacagctggagccgtggaacataatgacagcggagtcatcaacttgcttttacaagaattgggcggcttacatgtgcgccgtcagaaagatggacagtggcttgctgttgagcccattcctggtgcattggtttgcatcaatggcatgattttgaaggtgattagcaatgggaagttagaaagtggaataca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="76572" stop="74289"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76372" g_stop="76365" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="8" r_length="8" r_score="0.750"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76364" i_stop="76266" i_length="99">
            <donor d_prob="0.063" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76265" g_stop="75970" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="304" r_length="296" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75969" i_stop="75651" i_length="319">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75650" g_stop="75329" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="626" r_length="322" r_score="0.997"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75328" i_stop="74624" i_length="705">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74623" g_stop="74589" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="627" r_stop="661" r_length="35" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E265729" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265729" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76372" e_stop="76365"/>
          <exon e_start="76265" e_stop="75970"/>
          <exon e_start="75650" e_stop="75329"/>
          <exon e_start="74623" e_stop="74589"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTACAGGTTAGGTTTAACTGATAATAGTGTGTACTAGTTACATGCACTGTCAACGTATATAAATTAAATCGATAATTATATTGTTGTTTATGATGTCATTATTAGGTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAGGTAAGTATTAAATATAATATCTTCTCTATTTCATTTCGTTTTGACCTGCACGTGAAAATTCTTTTTAATTTTGGGTGACGGTGTGATTCAATCTCAGGACGTCTGTCTGCTCTGCTATCATGTAATAATAATACCTGAGTCTAACTCAACCCCAAAAGCTAGCTCATGAAAGAGACCAAATTCTCATCGATAGTGAAACTTTTTAACAATATTAACTAGACATTAATAATTTTTTTAAAAGAATTTTTTATTTTATATATATTTAATATCTAATTCGCAATGAAATGTCTCACGATTATTACTATATTTTATTTACTAGGGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGAGCCATATTCAGTATATGGCTATAAACCTTTACCCAAAATGCCCCGACCCGACTGTAACAGCTGGAGCCGTGGAACATAATGACGGCGGAGTCATCAACTTGCTTTTACAAGAATTGGGCGGCTTACATGTGCGCCGTCAGAAAGATGGACAGTGGCTTGCTGTTGAGCCCATTCCTGGTGCATTGGTTTGCATCAATGGCATGATTTTGAAGGTATTTCCCAAGTTTTTGACGTGACACAAAAATTTTCGTATAATTTAAAATATATCATTATATATTTGCGTTATTATGAATAGAATATTTATTTTTATTAAATTTAAAAATATATCGCTTTTTTAAATCTGTATAAAAAGAAAAACGAGTCATATAATTAAAATTGATGCAGGTGAGTAAGACATAAGCATTTTTGTTGGAATGTAAAGCTGATTTAATATCCGATAATAGATATTAGTAGGGGAGTTAGAATTTTTATTAAGAAGGTTAAAAATATGAAATAGTTAAGGGGATTCAACATTTGTTATTTACGCATAAAATACTCCATCTGTCTTATTTTATGTAAGATAGTTGGACTCAAGACACGGAATTTAAAAAAGAAAAAAAGACTTTTAAAACTTATGGTCTAAAATGGATGATAAAAATTTGTATTGCTATAAATCATTTCATTCATTAGGGTAAAATAAATATTATAAAATTAAATTGATTCTTAATATAAAAATGTGTCATTTTTTTTGAATTAATTAAAAATAAAATAAATCATATAAATTGTGACAGAAAAATTAATTTAATATAATTTTTTATCGAAGGTAATTCAGATGAACCTCTGGACCCTTACTTGTAAGATCCTTTTGTCAATTGTTTTATTTTTTTTATAGGTCAATGTAAAATATGACTAAATTGTCAATTAATTTTTTAACTCAGGTGATTAGCAATGGGAAGTTAGAAAGTGGAATACA</genome_strand>
        <mrna_strand>TTTTTCAG...................................................................................................GTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGGTGAATTTTTCAAGTTGCCGATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAG...............................................................................................................................................................................................................................................................................................................................GGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGAGCCATATTCAGTATATGGCTATAAACCTTTACCCAAAATGCCCCGACCCGACTGTAACAGCTGGAGCCGTGGAACATAATGACAGCGGAGTCATCAACTTGCTTTTACAAGAATTGGGCGGCTTACATGTGCGCCGTCAGAAAGATGGACAGTGGCTTGCTGTTGAGCCCATTCCTGGTGCATTGGTTTGCATCAATGGCATGATTTTGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAGCAATGGGAAGTTAGAAAGTGGAATACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E571754" ref_strand="+" ref_description="SGN-E571754 [30802]">
      <seq>ctcaattctctacaatcatctatacttttaagaaaaccaaaaaatggcatctctggtgtctagctgggcttcacaagtgaacactgtgcctgaaaggtatgtggtgcctacagagaaaagattgaatgtaaatgtcccaattggtaaagacattccagttattgatttgtcacatcctaattctgcccacatagctgaacaaatcatcaaagcttctcaagactatggagtttttcaggtgattaaccatggagtgccacaagagttgattggtgatgtccttaaagtttgtgatgaatttttcaagttgccaattgaggacttggaaaagtatactgaagaagaagagttgagtgaatttgagccaaatcttgaccagaaaccaaagctttatattgaaaaggaatataaacctaagaagaatggcaaaaatgataaagaagttattttctggaaagacacttttgctcattgtactcatcctaccaaagaagatagaattaattcttggcctgaaaagccagcacaatatagggaagtgattggaaaatatagtgagggagtgaggaaggcaaatttgagaattttggagctaatgtgtgaaggattgggacttgaaaaggattactttgcaaatgagctgagccatattcagtatatggctatcaaactttacccaaaaatgccccgaaccgacttgtaaacggctggagccgtggaacataatgacggcggagtcatcaacttgtttttaacaagaattgggcgggtttacatgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77221" stop="75109"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76958" g_stop="76721" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="238" r_length="238" r_score="0.941"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76720" i_stop="76266" i_length="455">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76265" g_stop="75970" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="534" r_length="296" r_score="0.973"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75969" i_stop="75651" i_length="319">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75650" g_stop="75409" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="535" r_stop="781" r_length="247" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E571754" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>776</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E571754" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76958" e_stop="76721"/>
          <exon e_start="76265" e_stop="75970"/>
          <exon e_start="75650" e_stop="75409"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAATTTTCTAC-ATCATCTTTAC-TTTAAGAAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAGGTAATATAATTATAGAGTTTTAAGTTTTATGTACTGATAGTGAAAAAAATATTTATACAATCAGGTCATTTAAAATGTAATTGCATGATACTTATTATATTTATGTTGGTGGAGGTAGTGACTTCCATGTAATTAGTCGAGAAGTGTATGCAAACTGATACAGACATCACGATGTAATTGCGAGTAGCTTTATTTAAACATTCATTGATAATTAACCTACGATAAGAAAATGTTGTTATAGAGAATGTAGTATGACATGAAAGATTGGGTCCACTGAAAAAAATTTGATTGTTATAGTGAAATATTGTTAAAGAGAGGTTTTTTTGACTGTACAAGCAAGTAACTTGTTATTACAGGTTAGGTTTAACTGATAATAGTGTGTACTAGTTACATGCACTGTCAACGTATATAAATTAAATCGATAATTATATTGTTGTTTATGATGTCATTATTAGGTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAGGTAAGTATTAAATATAATATCTTCTCTATTTCATTTCGTTTTGACCTGCACGTGAAAATTCTTTTTAATTTTGGGTGACGGTGTGATTCAATCTCAGGACGTCTGTCTGCTCTGCTATCATGTAATAATAATACCTGAGTCTAACTCAACCCCAAAAGCTAGCTCATGAAAGAGACCAAATTCTCATCGATAGTGAAACTTTTTAACAATATTAACTAGACATTAATAATTTTTTTAAAAGAATTTTTTATTTTATATATATTTAATATCTAATTCGCAATGAAATGTCTCACGATTATTACTATATTTTATTTACTAGGGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGAGCCATATTCAGTATATGGCTATAAACCTTTACCC-AAAATGCCCCGACCCGAC-TGT-AACAGCTGGAGCCGTGGAACATAATGACGGCGGAGTCATCAACTTGCTTTT-ACAAGAATTGGGC-GGCTTACATGTGC</genome_strand>
        <mrna_strand>CTCAATTCTCTACAATCATCTATACTTTTAAGAAAAC-CAAA-AAATGGCATCTCTGGTGTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACAGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCACATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAACCATGGAGTGCCACAAGAGTTGATTGGTGATGTCCTTAAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAACCTAAGAAGAATGGCAAAAATGATAAAGAAGTTATTTTCTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCACAATATAG...............................................................................................................................................................................................................................................................................................................................GGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGAGCCATATTCAGTATATGGCTATCAAACTTTACCCAAAAATGCCCCGAACCGACTTGTAAACGGCTGGAGCCGTGGAACATAATGACGGCGGAGTCATCAACTTGTTTTTAACAAGAATTGGGCGGGTTTACATGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E573451" ref_strand="+" ref_description="SGN-E573451 [32763]">
      <seq>caatcatctatacttttaagaaaaccaaaaaatggcatctctggtgtctagctgggcttcacaagtgaacactgtgcctgaaaggtatgtggtgcctacagagaaaagattgaatgtaaatgtcccaattggtaaagacattccagttattgatttgtcacatcctaattctgcccacatagctgaacaaatcatcaaagcttctcaagactatggagtttttcaggtgattaaccatggagtgccacaagagttgattggtgatgtccttaaagcttgtgatgaatttttcaagttgccaattgaggacttggaaaagtatactgaagaagaagagttgagtgaatttgagccaaatcttgaccagaagccaaagctttatattgaaaaggaatataaacctaagaagaatggcaaaaatgataaagaagttattttctggaaagacacttttgctcattgtactcatcctaccaaagaagatagaattaattcttgggcctgaaaagccagcacaatatagggaagtgattggaaaatatacggagggagtgaggaaggcaaatttgagaattttggagctaatgtgtgaaggattgggacttgaaaaggattactttgcaaatgagctgagccatattcagtatatggtatcaagctttacccaaaatgccgaccgactgtaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77221" stop="75199"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76947" g_stop="76721" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="226" r_length="226" r_score="0.947"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76720" i_stop="76266" i_length="455">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76265" g_stop="75970" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="523" r_length="297" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75969" i_stop="75651" i_length="319">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.968" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75650" g_stop="75484" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="524" r_stop="686" r_length="163" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E573451" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>690</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E573451" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76947" e_stop="76721"/>
          <exon e_start="76265" e_stop="75970"/>
          <exon e_start="75650" e_stop="75484"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATCATCTTTAC-TTTAAGAAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAGGTAATATAATTATAGAGTTTTAAGTTTTATGTACTGATAGTGAAAAAAATATTTATACAATCAGGTCATTTAAAATGTAATTGCATGATACTTATTATATTTATGTTGGTGGAGGTAGTGACTTCCATGTAATTAGTCGAGAAGTGTATGCAAACTGATACAGACATCACGATGTAATTGCGAGTAGCTTTATTTAAACATTCATTGATAATTAACCTACGATAAGAAAATGTTGTTATAGAGAATGTAGTATGACATGAAAGATTGGGTCCACTGAAAAAAATTTGATTGTTATAGTGAAATATTGTTAAAGAGAGGTTTTTTTGACTGTACAAGCAAGTAACTTGTTATTACAGGTTAGGTTTAACTGATAATAGTGTGTACTAGTTACATGCACTGTCAACGTATATAAATTAAATCGATAATTATATTGTTGTTTATGATGTCATTATTAGGTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTT-GGCCTGAAAAGCCAGCAAAATATAGGTAAGTATTAAATATAATATCTTCTCTATTTCATTTCGTTTTGACCTGCACGTGAAAATTCTTTTTAATTTTGGGTGACGGTGTGATTCAATCTCAGGACGTCTGTCTGCTCTGCTATCATGTAATAATAATACCTGAGTCTAACTCAACCCCAAAAGCTAGCTCATGAAAGAGACCAAATTCTCATCGATAGTGAAACTTTTTAACAATATTAACTAGACATTAATAATTTTTTTAAAAGAATTTTTTATTTTATATATATTTAATATCTAATTCGCAATGAAATGTCTCACGATTATTACTATATTTTATTTACTAGGGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGAGCCATATTCAGTATATGGCTATAAACCTTTACCCAAAATGCCCCGACCCGACTGTAA</genome_strand>
        <mrna_strand>CAATCATCTATACTTTTAAGAAAAC-CAAA-AAATGGCATCTCTGGTGTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACAGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCACATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAACCATGGAGTGCCACAAGAGTTGATTGGTGATGTCCTTAAAGCTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAGCCAAAGCTTTATATTGAAAAGGAATATAAACCTAAGAAGAATGGCAAAAATGATAAAGAAGTTATTTTCTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGGCCTGAAAAGCCAGCACAATATAG...............................................................................................................................................................................................................................................................................................................................GGAAGTGATTGGAAAATATACGGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGAGCCATATTCAGTATATGG-TATCAAGCTTTACCCAAAATG--CCGA-CCGACTGTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E265101" ref_strand="+" ref_description="SGN-E265101 [cLEI-2-L2]">
      <seq>tttttcaggtgattaaccatggagtgtcacaagagttgattggtgatgtccttgaagtttgtgatgaatttttcaagttgccaattgaggacttggaaaagtatactgaagaagaagagttgagtgaatttgagccaaatcttgaccagaaaccaaagctttatattgaaaaggaatataagcctaagaagaatggtaagaatgataaagaagtcattttttggaaagacacttttgctcattgtactcatcctaccaaagaagatagaattaattcttggcctgaaaagccagcaaaatatagggaagtgattggaaaatatagtgagggagtgaggaaggcaaatttgagaattttggagctaatgtgtgaaggattgggacttgaaaaggattactttgcaaatgagctgagccatattcagtatatggctataaacctttacccaaaatgccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="76572" stop="75198"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76372" g_stop="76365" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="8" r_length="8" r_score="0.750"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76364" i_stop="76266" i_length="99">
            <donor d_prob="0.063" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76265" g_stop="75970" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="304" r_length="296" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75969" i_stop="75651" i_length="319">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75650" g_stop="75498" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="457" r_length="153" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E265101" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>457</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265101" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76372" e_stop="76365"/>
          <exon e_start="76265" e_stop="75970"/>
          <exon e_start="75650" e_stop="75498"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTACAGGTTAGGTTTAACTGATAATAGTGTGTACTAGTTACATGCACTGTCAACGTATATAAATTAAATCGATAATTATATTGTTGTTTATGATGTCATTATTAGGTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAGGTAAGTATTAAATATAATATCTTCTCTATTTCATTTCGTTTTGACCTGCACGTGAAAATTCTTTTTAATTTTGGGTGACGGTGTGATTCAATCTCAGGACGTCTGTCTGCTCTGCTATCATGTAATAATAATACCTGAGTCTAACTCAACCCCAAAAGCTAGCTCATGAAAGAGACCAAATTCTCATCGATAGTGAAACTTTTTAACAATATTAACTAGACATTAATAATTTTTTTAAAAGAATTTTTTATTTTATATATATTTAATATCTAATTCGCAATGAAATGTCTCACGATTATTACTATATTTTATTTACTAGGGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGAGCCATATTCAGTATATGGCTATAAACCTTTACCCAAAATGCCC</genome_strand>
        <mrna_strand>TTTTTCAG...................................................................................................GTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAG...............................................................................................................................................................................................................................................................................................................................GGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGAGCCATATTCAGTATATGGCTATAAACCTTTACCCAAAATGCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E266130" ref_strand="+" ref_description="SGN-E266130 [cLEI-6-N9]">
      <seq>tttttcaggtgattaaccatggagtgtcacaagagttgattggtgatgtccttgaagtttgtgatgaatttttcaagttgccaattgaggacttggaaaagtatactgaagaagaagagttgagtgaatttgagccaaatcttgaccagaaaccaaagctttatattgaaaaggaatataagcctaagaagaatggtaagaatgataaagaagtcattttttggaaagacacttttgctcattgtactcatcctaccaaagaagatagaattaattcttggcctgaaaagccagcaaaatatagggaagtgattggaaaatatagtgagggagtgaggaaggcaaatttgagaattttggagctaatgtgtgaaggattgggacttgaaaaggattactttgcaaatgagctgagccatattcagtatatggctataaacctttacccaaaatgccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="76572" stop="75198"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76372" g_stop="76365" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="8" r_length="8" r_score="0.750"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76364" i_stop="76266" i_length="99">
            <donor d_prob="0.063" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76265" g_stop="75970" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="304" r_length="296" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75969" i_stop="75651" i_length="319">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75650" g_stop="75498" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="457" r_length="153" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E266130" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>457</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E266130" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76372" e_stop="76365"/>
          <exon e_start="76265" e_stop="75970"/>
          <exon e_start="75650" e_stop="75498"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTACAGGTTAGGTTTAACTGATAATAGTGTGTACTAGTTACATGCACTGTCAACGTATATAAATTAAATCGATAATTATATTGTTGTTTATGATGTCATTATTAGGTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAGGTAAGTATTAAATATAATATCTTCTCTATTTCATTTCGTTTTGACCTGCACGTGAAAATTCTTTTTAATTTTGGGTGACGGTGTGATTCAATCTCAGGACGTCTGTCTGCTCTGCTATCATGTAATAATAATACCTGAGTCTAACTCAACCCCAAAAGCTAGCTCATGAAAGAGACCAAATTCTCATCGATAGTGAAACTTTTTAACAATATTAACTAGACATTAATAATTTTTTTAAAAGAATTTTTTATTTTATATATATTTAATATCTAATTCGCAATGAAATGTCTCACGATTATTACTATATTTTATTTACTAGGGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGAGCCATATTCAGTATATGGCTATAAACCTTTACCCAAAATGCCC</genome_strand>
        <mrna_strand>TTTTTCAG...................................................................................................GTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAG...............................................................................................................................................................................................................................................................................................................................GGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGAGCCATATTCAGTATATGGCTATAAACCTTTACCCAAAATGCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E296742" ref_strand="+" ref_description="SGN-E296742 [cLEW-3-I11]">
      <seq>tctgatctctagctgggcttcacaagtgaacactgtgcctgaaaggtatgtggtgcctactgagaaaagattgaatgtaaatgtcccaattggtaaagacattccagttattgatttgtcacatcctaattctgccctcatagctgaacaaatcatcaaagcttctcaagactatggagtttttcaggtgattaaccatggagtgtcacaagagttgattggtgatgtccttgaagtttgtgatgaatttttcaagttgccaattgaggacttggaaaagtatactgaagaagaagagttgagtgaatttgagccaaatcttgaccagaaaccaaagctttatattgaaaaggaatataagcctaagaagaatggtaagaatgataaagaagtcattttttggaaagacacttttgctcattgtactcatcctaccaaagaagatagaattaattcttggcctgaaaagccagcaaaatatagggaagtgattggaaaatatagtgagggagtgaggaacgcaaatttgagaattttggagctaatgtgtgaaggattgggacttgaaaaggattactgtgcaaatgagctgagccatattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77207" stop="75232"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76907" g_stop="76721" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="187" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76720" i_stop="76266" i_length="455">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76265" g_stop="75970" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="483" r_length="296" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75969" i_stop="75651" i_length="319">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75650" g_stop="75532" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="602" r_length="119" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E296742" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E296742" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76907" e_stop="76721"/>
          <exon e_start="76265" e_stop="75970"/>
          <exon e_start="75650" e_stop="75532"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAGGTAATATAATTATAGAGTTTTAAGTTTTATGTACTGATAGTGAAAAAAATATTTATACAATCAGGTCATTTAAAATGTAATTGCATGATACTTATTATATTTATGTTGGTGGAGGTAGTGACTTCCATGTAATTAGTCGAGAAGTGTATGCAAACTGATACAGACATCACGATGTAATTGCGAGTAGCTTTATTTAAACATTCATTGATAATTAACCTACGATAAGAAAATGTTGTTATAGAGAATGTAGTATGACATGAAAGATTGGGTCCACTGAAAAAAATTTGATTGTTATAGTGAAATATTGTTAAAGAGAGGTTTTTTTGACTGTACAAGCAAGTAACTTGTTATTACAGGTTAGGTTTAACTGATAATAGTGTGTACTAGTTACATGCACTGTCAACGTATATAAATTAAATCGATAATTATATTGTTGTTTATGATGTCATTATTAGGTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAGGTAAGTATTAAATATAATATCTTCTCTATTTCATTTCGTTTTGACCTGCACGTGAAAATTCTTTTTAATTTTGGGTGACGGTGTGATTCAATCTCAGGACGTCTGTCTGCTCTGCTATCATGTAATAATAATACCTGAGTCTAACTCAACCCCAAAAGCTAGCTCATGAAAGAGACCAAATTCTCATCGATAGTGAAACTTTTTAACAATATTAACTAGACATTAATAATTTTTTTAAAAGAATTTTTTATTTTATATATATTTAATATCTAATTCGCAATGAAATGTCTCACGATTATTACTATATTTTATTTACTAGGGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGAGCCATATTC</genome_strand>
        <mrna_strand>TCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAG...............................................................................................................................................................................................................................................................................................................................GGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAACGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTGTGCAAATGAGCTGAGCCATATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E264985" ref_strand="+" ref_description="SGN-E264985 [cLEI-10-F13]">
      <seq>tgatctctagctgggcttcacaagtgaacactgtgcctgaaaggtatgtggtgcctactgagaaaagattgaatgtaaatgtcccaattggtaaagacattccagttattgatttgtcacatcctaattctgccctcatagctgaacaaatcatcaaagcttctcaagactatggagtttttcaggtgattaaccatggagtgtcacaagagttgattggtgatgtccttgaagtttgtgatgaatttttcaagttgccaattgaggacttggaaaagtatactgaagaagaagagttgagtgaatttgagccaaatcttgaccagaaaccaaagctttatattgaaaaggaatataagcctaagaagaatggtaagaatgagaaagaagtcattttttggaaagacacttttgctcattgtactcatcctaccaaagaagatagaattaattcttggcctgaaaagccagcaaaatatagggaagtgattggaaaatatagtgagggagtgaggaaggcaaatttgagaattttggagctaatgtgtgaaggattgggacttgaaaaggattactttgcaaatgagctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77205" stop="75241"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76905" g_stop="76721" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="185" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76720" i_stop="76266" i_length="455">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76265" g_stop="75970" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="481" r_length="296" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75969" i_stop="75651" i_length="319">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75650" g_stop="75541" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="482" r_stop="591" r_length="110" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E264985" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E264985" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76905" e_stop="76721"/>
          <exon e_start="76265" e_stop="75970"/>
          <exon e_start="75650" e_stop="75541"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAGGTAATATAATTATAGAGTTTTAAGTTTTATGTACTGATAGTGAAAAAAATATTTATACAATCAGGTCATTTAAAATGTAATTGCATGATACTTATTATATTTATGTTGGTGGAGGTAGTGACTTCCATGTAATTAGTCGAGAAGTGTATGCAAACTGATACAGACATCACGATGTAATTGCGAGTAGCTTTATTTAAACATTCATTGATAATTAACCTACGATAAGAAAATGTTGTTATAGAGAATGTAGTATGACATGAAAGATTGGGTCCACTGAAAAAAATTTGATTGTTATAGTGAAATATTGTTAAAGAGAGGTTTTTTTGACTGTACAAGCAAGTAACTTGTTATTACAGGTTAGGTTTAACTGATAATAGTGTGTACTAGTTACATGCACTGTCAACGTATATAAATTAAATCGATAATTATATTGTTGTTTATGATGTCATTATTAGGTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAGGTAAGTATTAAATATAATATCTTCTCTATTTCATTTCGTTTTGACCTGCACGTGAAAATTCTTTTTAATTTTGGGTGACGGTGTGATTCAATCTCAGGACGTCTGTCTGCTCTGCTATCATGTAATAATAATACCTGAGTCTAACTCAACCCCAAAAGCTAGCTCATGAAAGAGACCAAATTCTCATCGATAGTGAAACTTTTTAACAATATTAACTAGACATTAATAATTTTTTTAAAAGAATTTTTTATTTTATATATATTTAATATCTAATTCGCAATGAAATGTCTCACGATTATTACTATATTTTATTTACTAGGGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGA</genome_strand>
        <mrna_strand>TGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGAGAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAG...............................................................................................................................................................................................................................................................................................................................GGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E265728" ref_strand="+" ref_description="SGN-E265728 [cLEI-11-A16]">
      <seq>ggcatctctgatctctagctgggcttcacaagtgaacactgtgcctgaaaggtatgtggtgcctactgagaaaagattgaatgtaaatgtcccaattggtaaagacattccagttattgatttgtcacatcctaattctgccctcatagctgaacaaatcatcaaagcttctcaagactatggagtttttcaggtgattaaccatggagtgtcacaagagttgattggtgatgtccttgaagtttgtgatgaatttttcaagttgccaattgaggacttggaaaagtatactgaagaagaagagttgagtgaatttgagccaaatcttgaccagaaaccaaagctttatattgaaaaggaatataagcctaagaagaatggtaagaatgataaagaagtcattttttggaaagacacttttgctcattgtactcatcctaccaaagaagatagaattaattcttggcctgaaaagccagcaaaatatagggaagtgattggaaaatataatgagggagtgaggaaagcaaatttgagaattttggagctaatgtgtgaaggattgggacttgaaaaggattactttgcaaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77213" stop="75247"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76913" g_stop="76721" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="193" r_length="193" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76720" i_stop="76266" i_length="455">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76265" g_stop="75970" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="489" r_length="296" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75969" i_stop="75651" i_length="319">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75650" g_stop="75547" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="593" r_length="104" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E265728" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>593</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265728" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76913" e_stop="76721"/>
          <exon e_start="76265" e_stop="75970"/>
          <exon e_start="75650" e_stop="75547"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAGGTAATATAATTATAGAGTTTTAAGTTTTATGTACTGATAGTGAAAAAAATATTTATACAATCAGGTCATTTAAAATGTAATTGCATGATACTTATTATATTTATGTTGGTGGAGGTAGTGACTTCCATGTAATTAGTCGAGAAGTGTATGCAAACTGATACAGACATCACGATGTAATTGCGAGTAGCTTTATTTAAACATTCATTGATAATTAACCTACGATAAGAAAATGTTGTTATAGAGAATGTAGTATGACATGAAAGATTGGGTCCACTGAAAAAAATTTGATTGTTATAGTGAAATATTGTTAAAGAGAGGTTTTTTTGACTGTACAAGCAAGTAACTTGTTATTACAGGTTAGGTTTAACTGATAATAGTGTGTACTAGTTACATGCACTGTCAACGTATATAAATTAAATCGATAATTATATTGTTGTTTATGATGTCATTATTAGGTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAGGTAAGTATTAAATATAATATCTTCTCTATTTCATTTCGTTTTGACCTGCACGTGAAAATTCTTTTTAATTTTGGGTGACGGTGTGATTCAATCTCAGGACGTCTGTCTGCTCTGCTATCATGTAATAATAATACCTGAGTCTAACTCAACCCCAAAAGCTAGCTCATGAAAGAGACCAAATTCTCATCGATAGTGAAACTTTTTAACAATATTAACTAGACATTAATAATTTTTTTAAAAGAATTTTTTATTTTATATATATTTAATATCTAATTCGCAATGAAATGTCTCACGATTATTACTATATTTTATTTACTAGGGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATG</genome_strand>
        <mrna_strand>GGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAG...............................................................................................................................................................................................................................................................................................................................GGAAGTGATTGGAAAATATAATGAGGGAGTGAGGAAAGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E265722" ref_strand="+" ref_description="SGN-E265722 [cLEI-11-O1]">
      <seq>aattttctacatcatctttactttaagaaaactaaaagaaatggcatctctgatctctagctgggcttcacaagtgaacactgtgcctgaaaggtatgtggtgcctactgagaaaagattgaatgtaaatgtcccaattggtaaagacattccagttattgatttgtcacatcctaattctgccctcatagctgaacaaatcatcaaagcttctcaagactatggagtttttcaggtgattaaccatggagtgtcacaagagttgattggtgatgtccttgaagtttgtgatgaatttttcaagttgccaattgaggacttggaaaagtatactgaagaagaagagttgagtgaatttgagccaaatcttgaccagaaaccaaagctttatattgaaaaggaatataagcctaagaagaatggtaagaatgataaagaagtcattttttggaaagacacttttgctcattgtactcatcctaccaaagaagatagaattaattcttggcctgaaaagccagcaaaatatagggaagtgattggaaaatatagtgagggagtgaggaaggcaaatttgagaattttggagctaatgtgtgaaggattgggacttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77255" stop="75267"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76955" g_stop="76721" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="235" r_length="235" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76720" i_stop="76266" i_length="455">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76265" g_stop="75970" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="531" r_length="296" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75969" i_stop="75651" i_length="319">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75650" g_stop="75567" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="532" r_stop="615" r_length="84" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E265722" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265722" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76955" e_stop="76721"/>
          <exon e_start="76265" e_stop="75970"/>
          <exon e_start="75650" e_stop="75567"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTCTACATCATCTTTACTTTAAGAAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAGGTAATATAATTATAGAGTTTTAAGTTTTATGTACTGATAGTGAAAAAAATATTTATACAATCAGGTCATTTAAAATGTAATTGCATGATACTTATTATATTTATGTTGGTGGAGGTAGTGACTTCCATGTAATTAGTCGAGAAGTGTATGCAAACTGATACAGACATCACGATGTAATTGCGAGTAGCTTTATTTAAACATTCATTGATAATTAACCTACGATAAGAAAATGTTGTTATAGAGAATGTAGTATGACATGAAAGATTGGGTCCACTGAAAAAAATTTGATTGTTATAGTGAAATATTGTTAAAGAGAGGTTTTTTTGACTGTACAAGCAAGTAACTTGTTATTACAGGTTAGGTTTAACTGATAATAGTGTGTACTAGTTACATGCACTGTCAACGTATATAAATTAAATCGATAATTATATTGTTGTTTATGATGTCATTATTAGGTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAGGTAAGTATTAAATATAATATCTTCTCTATTTCATTTCGTTTTGACCTGCACGTGAAAATTCTTTTTAATTTTGGGTGACGGTGTGATTCAATCTCAGGACGTCTGTCTGCTCTGCTATCATGTAATAATAATACCTGAGTCTAACTCAACCCCAAAAGCTAGCTCATGAAAGAGACCAAATTCTCATCGATAGTGAAACTTTTTAACAATATTAACTAGACATTAATAATTTTTTTAAAAGAATTTTTTATTTTATATATATTTAATATCTAATTCGCAATGAAATGTCTCACGATTATTACTATATTTTATTTACTAGGGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGA</genome_strand>
        <mrna_strand>AATTTTCTACATCATCTTTACTTTAAGAAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAG...............................................................................................................................................................................................................................................................................................................................GGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E265008" ref_strand="+" ref_description="SGN-E265008 [cLEI-10-P17]">
      <seq>aaaactaaaagaaatggcatctctgatctctagctgggcttcacaagtgaacactgtgcctgaaaggtatgtggtgcctactgagaaaagattgaatgtaaatgtcccaattggtaaagacattccagttattgatttgtcacatcctaattctgccctcatagctgaacaaatcatcaaagcttctcaagactatggagtttttcaggtgattaaccatggagtgtcacaagagttgattggtgatgtccttgaagtttgtgatgaatttttcaagttgccaattgaggacttggaaaagtatactgaagaagaagagttgagtgaatttgagccaaatcttgaccagaaaccaaagctttatattgaaaaggaatataagcctaagaagaatggtaagaatgataaagaagtcattttttggaaagacacttttgctcattgtactcatcctaccaaagaagatagaattaattcttggcctgaaaagccagcaaaatatagggaagtgattggaaaatatagtgagggagtgaggaaggcaaatttgagaattttggagctaatgtgtgaaggattggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77228" stop="75272"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76928" g_stop="76721" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="208" r_length="208" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76720" i_stop="76266" i_length="455">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76265" g_stop="75970" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="504" r_length="296" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75969" i_stop="75651" i_length="319">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75650" g_stop="75572" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="583" r_length="79" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E265008" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>583</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265008" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76928" e_stop="76721"/>
          <exon e_start="76265" e_stop="75970"/>
          <exon e_start="75650" e_stop="75572"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAGGTAATATAATTATAGAGTTTTAAGTTTTATGTACTGATAGTGAAAAAAATATTTATACAATCAGGTCATTTAAAATGTAATTGCATGATACTTATTATATTTATGTTGGTGGAGGTAGTGACTTCCATGTAATTAGTCGAGAAGTGTATGCAAACTGATACAGACATCACGATGTAATTGCGAGTAGCTTTATTTAAACATTCATTGATAATTAACCTACGATAAGAAAATGTTGTTATAGAGAATGTAGTATGACATGAAAGATTGGGTCCACTGAAAAAAATTTGATTGTTATAGTGAAATATTGTTAAAGAGAGGTTTTTTTGACTGTACAAGCAAGTAACTTGTTATTACAGGTTAGGTTTAACTGATAATAGTGTGTACTAGTTACATGCACTGTCAACGTATATAAATTAAATCGATAATTATATTGTTGTTTATGATGTCATTATTAGGTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAGGTAAGTATTAAATATAATATCTTCTCTATTTCATTTCGTTTTGACCTGCACGTGAAAATTCTTTTTAATTTTGGGTGACGGTGTGATTCAATCTCAGGACGTCTGTCTGCTCTGCTATCATGTAATAATAATACCTGAGTCTAACTCAACCCCAAAAGCTAGCTCATGAAAGAGACCAAATTCTCATCGATAGTGAAACTTTTTAACAATATTAACTAGACATTAATAATTTTTTTAAAAGAATTTTTTATTTTATATATATTTAATATCTAATTCGCAATGAAATGTCTCACGATTATTACTATATTTTATTTACTAGGGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGA</genome_strand>
        <mrna_strand>AAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAG...............................................................................................................................................................................................................................................................................................................................GGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E265282" ref_strand="+" ref_description="SGN-E265282 [cLEI-9-I8]">
      <seq>aattttctacatcatctttactttaagaaaactaaaagaaatggcatctctgatctctagctgggcttcacaagtgaacactgtgcctgaaaggtatgtggtgcctactgagaaaagattgaatgtaaatgtcccaattggtaaagacattccagttattgatttgtcacatcctaattctgccctcatagctgaacaaatcatcaaagcttctcaagactatggagtttttcaggtgattaaccatggagtgtcacaagagttgattggtgatgtccttgaagtttgtgatgaatttttcaagttgccaattgaggacttggaaaagtatactgaagaagaagagttgagtgaatttgagccaaatcttgaccagaaaccaaagctttatattgaaaaggaatatacgcctaagaagaatggtgagaatgataaagaagtcattttttggaaagacacttttgctcattgtactcatcctaccaaagaagatagaattaattcttggcctgaaaagctcagcaaaatatacggaagtgattggaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77255" stop="75653"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76955" g_stop="76721" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="235" r_length="235" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76720" i_stop="76266" i_length="455">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76265" g_stop="75970" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="532" r_length="297" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E265282" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265282" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76955" e_stop="76721"/>
          <exon e_start="76265" e_stop="75970"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTCTACATCATCTTTACTTTAAGAAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAGGTAATATAATTATAGAGTTTTAAGTTTTATGTACTGATAGTGAAAAAAATATTTATACAATCAGGTCATTTAAAATGTAATTGCATGATACTTATTATATTTATGTTGGTGGAGGTAGTGACTTCCATGTAATTAGTCGAGAAGTGTATGCAAACTGATACAGACATCACGATGTAATTGCGAGTAGCTTTATTTAAACATTCATTGATAATTAACCTACGATAAGAAAATGTTGTTATAGAGAATGTAGTATGACATGAAAGATTGGGTCCACTGAAAAAAATTTGATTGTTATAGTGAAATATTGTTAAAGAGAGGTTTTTTTGACTGTACAAGCAAGTAACTTGTTATTACAGGTTAGGTTTAACTGATAATAGTGTGTACTAGTTACATGCACTGTCAACGTATATAAATTAAATCGATAATTATATTGTTGTTTATGATGTCATTATTAGGTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGC-CAGCAAAATATAG</genome_strand>
        <mrna_strand>AATTTTCTACATCATCTTTACTTTAAGAAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATACGCCTAAGAAGAATGGTGAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCTCAGCAAAATATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E266463" ref_strand="+" ref_description="SGN-E266463 [cLEI-3-N8]">
      <seq>aattttctacatcatctttactttaagaaaactaaaagaaatggcatctctgatctctagctgggcttcacaagtgaacactgtgcctgaaaggtatgtggtgcctactgagaaaagattgaatgtaaatgtcccaattggtaaagacattccagttattgatttgtcacatcctaattctgccctcatagctgaacaaatcatcaaagcttctcaagactatggagtttttcaggtgattaaccatggagtgtcacaagagttgattggtgatgtccttgaagtttgtgatgaatttttcaagttgccaattgaggacttggaaaagtatactgaagaagaagagttgagtgaatttgagccaaatcttgaccagaaaccaaagctttatattgaaaaggaatataagcctaagaagaatggtaagaatgataaagaagtcattttttggaaagacacttttgctcattgtactcatcctaccaaagaagatagaattaattcttggcctgaaaagccagcaaaatatanggaagtgattggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77255" stop="75656"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76955" g_stop="76721" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="235" r_length="235" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76720" i_stop="76266" i_length="455">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76265" g_stop="75970" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="531" r_length="296" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E266463" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E266463" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76955" e_stop="76721"/>
          <exon e_start="76265" e_stop="75970"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTCTACATCATCTTTACTTTAAGAAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAGGTAATATAATTATAGAGTTTTAAGTTTTATGTACTGATAGTGAAAAAAATATTTATACAATCAGGTCATTTAAAATGTAATTGCATGATACTTATTATATTTATGTTGGTGGAGGTAGTGACTTCCATGTAATTAGTCGAGAAGTGTATGCAAACTGATACAGACATCACGATGTAATTGCGAGTAGCTTTATTTAAACATTCATTGATAATTAACCTACGATAAGAAAATGTTGTTATAGAGAATGTAGTATGACATGAAAGATTGGGTCCACTGAAAAAAATTTGATTGTTATAGTGAAATATTGTTAAAGAGAGGTTTTTTTGACTGTACAAGCAAGTAACTTGTTATTACAGGTTAGGTTTAACTGATAATAGTGTGTACTAGTTACATGCACTGTCAACGTATATAAATTAAATCGATAATTATATTGTTGTTTATGATGTCATTATTAGGTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAG</genome_strand>
        <mrna_strand>AATTTTCTACATCATCTTTACTTTAAGAAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAN</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E266936" ref_strand="+" ref_description="SGN-E266936 [cLEI-7-K18]">
      <seq>aattttctacatcatctttactttaagaaaactaaaagaaatggcatctctgatctctagctgggcttcacaagtgaacactgtgcctgaaaggtatgtggtgcctactgagaaaagattgaatgtaaatgtcccaattggtaaagacattccagttattgatttgtcacatcctaattctgccctcatagctgaacaaatcatcaaagcttctcaagactatggagtttttcaggtgattaaccatggagtgtcacaagagttgattggtgatgtccttgaagtttgtgatgaatttttcaagttgccaattgaggacttggaaaagtatactgaagaagaagagttgagtgaatttgagccaaatcttgaccagaaaccaaagctttatattgaaaaggaatataagcctaagaagaatggtaagaatgataaagaagtcattttttggaaagacacttttgctcattgtactcatcctaccaaagaagatagaattaattcttggcctgaaaagccagcaaaatataaggaagtgattggaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77255" stop="75653"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76955" g_stop="76721" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="235" r_length="235" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76720" i_stop="76266" i_length="455">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76265" g_stop="75970" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="531" r_length="296" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E266936" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E266936" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76955" e_stop="76721"/>
          <exon e_start="76265" e_stop="75970"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTCTACATCATCTTTACTTTAAGAAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAGGTAATATAATTATAGAGTTTTAAGTTTTATGTACTGATAGTGAAAAAAATATTTATACAATCAGGTCATTTAAAATGTAATTGCATGATACTTATTATATTTATGTTGGTGGAGGTAGTGACTTCCATGTAATTAGTCGAGAAGTGTATGCAAACTGATACAGACATCACGATGTAATTGCGAGTAGCTTTATTTAAACATTCATTGATAATTAACCTACGATAAGAAAATGTTGTTATAGAGAATGTAGTATGACATGAAAGATTGGGTCCACTGAAAAAAATTTGATTGTTATAGTGAAATATTGTTAAAGAGAGGTTTTTTTGACTGTACAAGCAAGTAACTTGTTATTACAGGTTAGGTTTAACTGATAATAGTGTGTACTAGTTACATGCACTGTCAACGTATATAAATTAAATCGATAATTATATTGTTGTTTATGATGTCATTATTAGGTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAG</genome_strand>
        <mrna_strand>AATTTTCTACATCATCTTTACTTTAAGAAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E265428" ref_strand="+" ref_description="SGN-E265428 [cLEI-9-D11]">
      <seq>gtttctacatcatctttactttaagaaaactaaaagaaatggcatctctgatctctagctgggcttcacaagtgaacactgtgcctgaaaggtatgtggtgcctactgagaaaagattgaatgtaaatgtcccaattggtaaagacattccagttattgatttgtcacatcctaattctgccctcatagctgaacaaatcatcaaagcttctcaagactatggagtttttcaagtgattaaccatggagtgtcacaagagttgattggtgatgtccttgaagtttgtgatgaatttttcaagttgccaattgaggacttggaaaagtatactgaagaagaagagttgagtgaatttgagccaaatcttgaccagaaaccaaagctttatattgaaaaggaatataagcctaagaagaatggttagaatgataaagaagtcattttttggaaagacacttttgctcattgtactcatcctaccaaagaagatagaattaattcttggcctgaaaagccagcaaaatatatggaagtgattggaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77252" stop="75653"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76953" g_stop="76721" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="233" r_length="233" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76720" i_stop="76266" i_length="455">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76265" g_stop="75970" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="529" r_length="296" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E265428" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265428" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76953" e_stop="76721"/>
          <exon e_start="76265" e_stop="75970"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCTACATCATCTTTACTTTAAGAAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAGGTAATATAATTATAGAGTTTTAAGTTTTATGTACTGATAGTGAAAAAAATATTTATACAATCAGGTCATTTAAAATGTAATTGCATGATACTTATTATATTTATGTTGGTGGAGGTAGTGACTTCCATGTAATTAGTCGAGAAGTGTATGCAAACTGATACAGACATCACGATGTAATTGCGAGTAGCTTTATTTAAACATTCATTGATAATTAACCTACGATAAGAAAATGTTGTTATAGAGAATGTAGTATGACATGAAAGATTGGGTCCACTGAAAAAAATTTGATTGTTATAGTGAAATATTGTTAAAGAGAGGTTTTTTTGACTGTACAAGCAAGTAACTTGTTATTACAGGTTAGGTTTAACTGATAATAGTGTGTACTAGTTACATGCACTGTCAACGTATATAAATTAAATCGATAATTATATTGTTGTTTATGATGTCATTATTAGGTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAG</genome_strand>
        <mrna_strand>GTTTCTACATCATCTTTACTTTAAGAAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTTAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E265027" ref_strand="+" ref_description="SGN-E265027 [cLEI-2-K7]">
      <seq>aaatggcatctctgatctctagctgggcttcacaagtgaacactgtgcctgaaaggtatgtggtgcctactgagaaaagattgaatgtaaatgtcccaattggtaaagacattccagttattgatttgtcacatcctaattctgccctcatagctgaacaaatcatcaaagcttctcaagactatggagtttttcaggtgattaaccatggagtgtcacaagagttgattggtgatgtccttgaagtttgagatgaatttttcaagttgccaattgaggacttggaaaagtatactgaataagaagagttgagtgaatttgagccaaatcttgaccagaaaccaaagctttatattgaaaaggaatataagcctaataagaatggtaagaatgataaataagtcattttttggaaagacacttttgctcattgtactcatcctaccaaagaagatagaattaattcttggcctgaaaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77217" stop="75683"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76917" g_stop="76721" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="197" r_length="197" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76720" i_stop="76266" i_length="455">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76265" g_stop="75983" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="480" r_length="283" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E265027" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265027" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76917" e_stop="76721"/>
          <exon e_start="76265" e_stop="75983"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAGGTAATATAATTATAGAGTTTTAAGTTTTATGTACTGATAGTGAAAAAAATATTTATACAATCAGGTCATTTAAAATGTAATTGCATGATACTTATTATATTTATGTTGGTGGAGGTAGTGACTTCCATGTAATTAGTCGAGAAGTGTATGCAAACTGATACAGACATCACGATGTAATTGCGAGTAGCTTTATTTAAACATTCATTGATAATTAACCTACGATAAGAAAATGTTGTTATAGAGAATGTAGTATGACATGAAAGATTGGGTCCACTGAAAAAAATTTGATTGTTATAGTGAAATATTGTTAAAGAGAGGTTTTTTTGACTGTACAAGCAAGTAACTTGTTATTACAGGTTAGGTTTAACTGATAATAGTGTGTACTAGTTACATGCACTGTCAACGTATATAAATTAAATCGATAATTATATTGTTGTTTATGATGTCATTATTAGGTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGC</genome_strand>
        <mrna_strand>AAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGAGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAATAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAATAAGAATGGTAAGAATGATAAATAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E304490" ref_strand="+" ref_description="SGN-E304490 [cLEX-12-P12]">
      <seq>gaacaaatggcatctctgatctctaggtggacttcacaaatgaacactgtgcctgaaaggtatgtggtgcctactgagaaaagattgaatgtaaatgtcccaattggtaaagacattccacttattgattagtcacatcctaattctgccctcatagctgaacaaatcatcaaagcttctcaagactatggagctttccaggtgattaaccatggagtgtcacaagagttgatcggtgatgaccttgaagtttgtgatgaatttttcaagttgccagttgaagacttggaaaagtatactgcagaagaagagttgagtgaatttgagccaaatcttgaccagaaaccaaagctttatattgaaaaggaatataagcctaagaagaatggtaagaatgataaagaagtcattttttggaaagacacttttgctcattgtactcatcctaccaaagaagatagaattaattcttggcctgaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77220" stop="75684"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76921" g_stop="76721" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="201" r_length="201" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76720" i_stop="76266" i_length="455">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76265" g_stop="75984" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="483" r_length="282" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E304490" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>483</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E304490" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76921" e_stop="76721"/>
          <exon e_start="76265" e_stop="75984"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAGGTAATATAATTATAGAGTTTTAAGTTTTATGTACTGATAGTGAAAAAAATATTTATACAATCAGGTCATTTAAAATGTAATTGCATGATACTTATTATATTTATGTTGGTGGAGGTAGTGACTTCCATGTAATTAGTCGAGAAGTGTATGCAAACTGATACAGACATCACGATGTAATTGCGAGTAGCTTTATTTAAACATTCATTGATAATTAACCTACGATAAGAAAATGTTGTTATAGAGAATGTAGTATGACATGAAAGATTGGGTCCACTGAAAAAAATTTGATTGTTATAGTGAAATATTGTTAAAGAGAGGTTTTTTTGACTGTACAAGCAAGTAACTTGTTATTACAGGTTAGGTTTAACTGATAATAGTGTGTACTAGTTACATGCACTGTCAACGTATATAAATTAAATCGATAATTATATTGTTGTTTATGATGTCATTATTAGGTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAG</genome_strand>
        <mrna_strand>GAACAAATGGCATCTCTGATCTCTAGGTGGACTTCACAAATGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCACTTATTGATTAGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGCTTTCCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAACCATGGAGTGTCACAAGAGTTGATCGGTGATGACCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAGTTGAAGACTTGGAAAAGTATACTGCAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E575666" ref_strand="+" ref_description="SGN-E575666 [35327]">
      <seq>cttttaagaaaaccaaaaaatggcatctctggtgtctagctgggcttcacaggtgaacactgtgcctgaaaggtatgtggtgcctacagagaaacagattgaatgtaaatgtcccaattggtaaagacattccagttattgatttgtcacatcctaattctgcccacatactgaacaaatcatcaaagcttctcaagactatggagtttctcaggtgattaaccatggagtgccacaagagtagataggtgatgtccttaaagtttgtgatgaatttttcaagttgccaattgaggacttggaaaagtatactgaagaagaagagttgagtgaatttgagccaaatcttgaccagaaaccaatgctttatattgaaaaggaatataaagctaagacgaatggcgatatatgatccagaagttattttctggaaagacacttttgctcattgtactcatcctacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77221" stop="75716"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76936" g_stop="76721" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="214" r_length="214" r_score="0.935"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76720" i_stop="76266" i_length="455">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.998" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76265" g_stop="76016" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="465" r_length="251" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E575666" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E575666" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76936" e_stop="76721"/>
          <exon e_start="76265" e_stop="76016"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTTAAGAAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAA-AGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAGGTAATATAATTATAGAGTTTTAAGTTTTATGTACTGATAGTGAAAAAAATATTTATACAATCAGGTCATTTAAAATGTAATTGCATGATACTTATTATATTTATGTTGGTGGAGGTAGTGACTTCCATGTAATTAGTCGAGAAGTGTATGCAAACTGATACAGACATCACGATGTAATTGCGAGTAGCTTTATTTAAACATTCATTGATAATTAACCTACGATAAGAAAATGTTGTTATAGAGAATGTAGTATGACATGAAAGATTGGGTCCACTGAAAAAAATTTGATTGTTATAGTGAAATATTGTTAAAGAGAGGTTTTTTTGACTGTACAAGCAAGTAACTTGTTATTACAGGTTAGGTTTAACTGATAATAGTGTGTACTAGTTACATGCACTGTCAACGTATATAAATTAAATCGATAATTATATTGTTGTTTATGATGTCATTATTAGGTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGA-ATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCA</genome_strand>
        <mrna_strand>CTTTTAAGAAAAC-CAAA-AAATGGCATCTCTGGTGTCTAGCTGGGCTTCACAGGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACAGAGAAACAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCACATA-CTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTCTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAACCATGGAGTGCCACAAGAGTAGATAGGTGATGTCCTTAAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAATGCTTTATATTGAAAAGGAATATAAAGCTAAGACGAATGGCGATATATGATCCAGAAGTTATTTTCTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E266817" ref_strand="+" ref_description="SGN-E266817 [cLEI-7-F9]">
      <seq>aattttctacatcatctttactttaagaaaactaaaagaaatggcatctctgatctctagctgggcttcacaagtgaacactgtgcctgaaaggtatgtggtgcctactgagaaaagattgaatgtaaatgtcccaattggtaaagacattccagttattgatttgtcacatcctaattctgccctcatagctgaacaaatcatcaaagcttctcaagactatggagtttttcaggtgattaaccatggagtgtcacaagagttgattggtgatgtccttgaagtttgtgatgaatttttcaagttgccaattgaggacttggaaaagtatactgaagaagaagagttgagtgaatttgagccaaatcttgaccagaaaccaaagctttatattgaaaaggaatataagcctaagaagaatggttagaatgataaagaagtcattttttggaaagacactcttgctcattgtactcatcctac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77255" stop="75718"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76955" g_stop="76721" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="235" r_length="235" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76720" i_stop="76266" i_length="455">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76265" g_stop="76018" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="483" r_length="248" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E266817" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>483</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E266817" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76955" e_stop="76721"/>
          <exon e_start="76265" e_stop="76018"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTCTACATCATCTTTACTTTAAGAAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAGGTAATATAATTATAGAGTTTTAAGTTTTATGTACTGATAGTGAAAAAAATATTTATACAATCAGGTCATTTAAAATGTAATTGCATGATACTTATTATATTTATGTTGGTGGAGGTAGTGACTTCCATGTAATTAGTCGAGAAGTGTATGCAAACTGATACAGACATCACGATGTAATTGCGAGTAGCTTTATTTAAACATTCATTGATAATTAACCTACGATAAGAAAATGTTGTTATAGAGAATGTAGTATGACATGAAAGATTGGGTCCACTGAAAAAAATTTGATTGTTATAGTGAAATATTGTTAAAGAGAGGTTTTTTTGACTGTACAAGCAAGTAACTTGTTATTACAGGTTAGGTTTAACTGATAATAGTGTGTACTAGTTACATGCACTGTCAACGTATATAAATTAAATCGATAATTATATTGTTGTTTATGATGTCATTATTAGGTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTAC</genome_strand>
        <mrna_strand>AATTTTCTACATCATCTTTACTTTAAGAAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTTAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTCTTGCTCATTGTACTCATCCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E544640" ref_strand="+" ref_description="SGN-E544640 [TUS-67-B6]">
      <seq>acgaaaataaatggcatctctgatctctagctgggcttcactagtgaacactgtgactgaaaagtatgtggtgcctactgagaaaagattgaatgtaaatgtcccaagtggcaaagacattccagttattgatttgtcacatcctatttctgccctcataactgaacaaatcatcaaagcttctcaagactatggagtttttcaggtgattaacacatggagtgtcacaagagtcgattggtgatgtccttgaaatttgtgatgaagttttcaagttgccaattgaggacttggaaaactatactgaataagaagagttgagtgaatgtgagcctaatcttgaccagaaaccaatgctttatactgaaaaggaatataagcctaagaagaatggtaagaatgatatagaagtcattctatggaaagacacttttgctcattgtactcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77225" stop="75722"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76925" g_stop="76721" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="205" r_length="205" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76720" i_stop="76266" i_length="455">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76265" g_stop="76022" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="450" r_length="245" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E544640" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>449</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E544640" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76925" e_stop="76721"/>
          <exon e_start="76265" e_stop="76022"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAGGTAATATAATTATAGAGTTTTAAGTTTTATGTACTGATAGTGAAAAAAATATTTATACAATCAGGTCATTTAAAATGTAATTGCATGATACTTATTATATTTATGTTGGTGGAGGTAGTGACTTCCATGTAATTAGTCGAGAAGTGTATGCAAACTGATACAGACATCACGATGTAATTGCGAGTAGCTTTATTTAAACATTCATTGATAATTAACCTACGATAAGAAAATGTTGTTATAGAGAATGTAGTATGACATGAAAGATTGGGTCCACTGAAAAAAATTTGATTGTTATAGTGAAATATTGTTAAAGAGAGGTTTTTTTGACTGTACAAGCAAGTAACTTGTTATTACAGGTTAGGTTTAACTGATAATAGTGTGTACTAGTTACATGCACTGTCAACGTATATAAATTAAATCGATAATTATATTGTTGTTTATGATGTCATTATTAGGTGATTAAC-CATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATC</genome_strand>
        <mrna_strand>ACGAAAATAAATGGCATCTCTGATCTCTAGCTGGGCTTCACTAGTGAACACTGTGACTGAAAAGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAAGTGGCAAAGACATTCCAGTTATTGATTTGTCACATCCTATTTCTGCCCTCATAACTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAACACATGGAGTGTCACAAGAGTCGATTGGTGATGTCCTTGAAATTTGTGATGAAGTTTTCAAGTTGCCAATTGAGGACTTGGAAAACTATACTGAATAAGAAGAGTTGAGTGAATGTGAGCCTAATCTTGACCAGAAACCAATGCTTTATACTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATATAGAAGTCATTCTATGGAAAGACACTTTTGCTCATTGTACTCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E310531" ref_strand="+" ref_description="SGN-E310531 [cLEZ-19-K17]">
      <seq>tgatctctaactgggcttcacaagtgaacactgtgcctgaaaggtatgtggtgcctactgagaaaagattgaatgtaaatgtcccaattggtaaagacattccagttattgatttgtcacatcctaattctgccctcatagctgaacaaatcatcaaagcttctcaagactatggagtttttcaggtgattaaccatggaatgttacaagagttgattggtgatgtccttgaagtttgtgatgaatttttcaagttgccaattgaggacttggaaaagtatactgatgaagaagagttgaatgaatttgagcccaatcttgaccagaaaccaaagctttatattgaaaaggaatgtaagcctaaaaagaatggtcagaatgattaggaagccattttttggaaagacacttttgctcattgtact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77205" stop="75726"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76905" g_stop="76721" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="185" r_length="185" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76720" i_stop="76266" i_length="455">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76265" g_stop="76026" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="425" r_length="240" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E310531" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>425</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E310531" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76905" e_stop="76721"/>
          <exon e_start="76265" e_stop="76026"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAGGTAATATAATTATAGAGTTTTAAGTTTTATGTACTGATAGTGAAAAAAATATTTATACAATCAGGTCATTTAAAATGTAATTGCATGATACTTATTATATTTATGTTGGTGGAGGTAGTGACTTCCATGTAATTAGTCGAGAAGTGTATGCAAACTGATACAGACATCACGATGTAATTGCGAGTAGCTTTATTTAAACATTCATTGATAATTAACCTACGATAAGAAAATGTTGTTATAGAGAATGTAGTATGACATGAAAGATTGGGTCCACTGAAAAAAATTTGATTGTTATAGTGAAATATTGTTAAAGAGAGGTTTTTTTGACTGTACAAGCAAGTAACTTGTTATTACAGGTTAGGTTTAACTGATAATAGTGTGTACTAGTTACATGCACTGTCAACGTATATAAATTAAATCGATAATTATATTGTTGTTTATGATGTCATTATTAGGTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACT</genome_strand>
        <mrna_strand>TGATCTCTAACTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAACCATGGAATGTTACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGATGAAGAAGAGTTGAATGAATTTGAGCCCAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATGTAAGCCTAAAAAGAATGGTCAGAATGATTAGGAAGCCATTTTTTGGAAAGACACTTTTGCTCATTGTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E624186" ref_strand="+" ref_description="SGN-E624186 [GI|10129807]">
      <seq>gctctttcttcttcctctctaatacccaaaacaccatagaaaatgcataaattatttgcagtaaggtccttaagttctgccatagccaaaaacttcaagtccctacaaaatcaacaagctgctttttctacttcattactattggatgatactcaaaaacagtttaaagaaagtgtagcaaaatttgctcaagagaatatagctccttatgctgaaaagattgacagaacaaacagtttcccaaaggagattaacttatggaaattgatgggggactttaatttgcatggaattactgcaccagaggaatatggtggtctcaaccttggatatttatatcactgcattgccttagaagaaattagtcgtgcatctggtgctgttgctgtttcctatggtgttcaatccaacgtttgcatcaaccaattggtgagaaatggaacccctgaccagaagcaaaaatatttaccaaagcttataagtggggatcacattggggctctagccatgagtgaaccaaatgctgggtcagatgttgttagcatgaagtgtcgagccgatcgtgtcgatggtggctatgttttaaatggaaataaaatgtggtgcaccaatggtcctgtcgctaatactttgattgtttatgcaaaaacggatacgactgctggttcaaaaggaattacagcatttatcatcgaaaaagaaatgccaggattctcaactgcacagaaattggacaaacttgggatgcgaggaagcgatacgtgtgaacttgtattcgagaattgctttgttcctaaagaaaatgttctagggcaggaaggaaaaggagtgtatgttctaatgtcggggctagatttagaacgacttgttttagcagcaggaccagttggaataatgcaggcatgtatggatattgttattccttacgttcgacaaagggagcaatttggaagaccaatcggcgaatttcaacttatacagggaaaactcgctgacatgtatactgctttacaatcttcaagatcatatgtgtatgctgttgcaaaggattgtgacaacgggaagattgatccaaaggattgttctgggaccatactacttgcagctgaaagagctactcaagttgctcttcaggcaattcaatgtctaggtggaaatggatatataaatgaatatccaacaggacgtttactaagagatgccaaaatgtatgagattgcagcaggaacaagtgaaataagaagacttgtaattggtcgtgagctctttaaacatcaataagtaattacaaattataattaattaggggatcctacattatttaatttcttcttatatccccaaaaaattgtatgtttaatcaataaattatatattcacgtaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="85217" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85518" g_stop="85652" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="162" r_length="135" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85653" i_stop="85798" i_length="146">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85799" g_stop="85882" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="246" r_length="84" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="85883" i_stop="85988" i_length="106">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.921" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="85989" g_stop="86046" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="304" r_length="58" r_score="0.931"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="86047" i_stop="87177" i_length="1131">
            <donor d_prob="0.972" d_score="0.92"/>
            <acceptor a_prob="0.555" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87178" g_stop="87302" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="429" r_length="125" r_score="0.984"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="87303" i_stop="87422" i_length="120">
            <donor d_prob="0.955" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.91"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="87423" g_stop="87467" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="474" r_length="45" r_score="0.911"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="87468" i_stop="87590" i_length="123">
            <donor d_prob="0.993" d_score="0.91"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="87591" g_stop="87639" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="475" r_stop="523" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="87640" i_stop="87772" i_length="133">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="87773" g_stop="87882" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="524" r_stop="633" r_length="110" r_score="0.991"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="87883" i_stop="88115" i_length="233">
            <donor d_prob="0.971" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="88116" g_stop="88192" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="634" r_stop="710" r_length="77" r_score="0.948"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="88193" i_stop="88311" i_length="119">
            <donor d_prob="0.993" d_score="0.94"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="88312" g_stop="88362" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="711" r_stop="761" r_length="51" r_score="0.961"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="88363" i_stop="88497" i_length="135">
            <donor d_prob="0.984" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="88498" g_stop="88562" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="762" r_stop="826" r_length="65" r_score="0.938"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="88563" i_stop="88642" i_length="80">
            <donor d_prob="0.981" d_score="0.92"/>
            <acceptor a_prob="0.986" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="88643" g_stop="88797" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="827" r_stop="981" r_length="155" r_score="0.955"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="88798" i_stop="88883" i_length="86">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="0.932" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="88884" g_stop="88924" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="982" r_stop="1022" r_length="41" r_score="0.976"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="88925" i_stop="89012" i_length="88">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="89013" g_stop="89067" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1023" r_stop="1077" r_length="55" r_score="0.964"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="89068" i_stop="89154" i_length="87">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="89155" g_stop="89211" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1078" r_stop="1134" r_length="57" r_score="0.912"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="89212" i_stop="89306" i_length="95">
            <donor d_prob="1.000" d_score="0.90"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="89307" g_stop="89549" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="1135" r_stop="1384" r_length="250" r_score="0.872"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="89550" i_stop="90096" i_length="547">
            <donor d_prob="0.000" d_score="0.64"/>
            <acceptor a_prob="0.524" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="90097" g_stop="90118" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="1385" r_stop="1406" r_length="22" r_score="0.591"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E624186" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>1372</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E624186" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85518" e_stop="85652"/>
          <exon e_start="85799" e_stop="85882"/>
          <exon e_start="85989" e_stop="86046"/>
          <exon e_start="87178" e_stop="87302"/>
          <exon e_start="87423" e_stop="87467"/>
          <exon e_start="87591" e_stop="87639"/>
          <exon e_start="87773" e_stop="87882"/>
          <exon e_start="88116" e_stop="88192"/>
          <exon e_start="88312" e_stop="88362"/>
          <exon e_start="88498" e_stop="88562"/>
          <exon e_start="88643" e_stop="88797"/>
          <exon e_start="88884" e_stop="88924"/>
          <exon e_start="89013" e_stop="89067"/>
          <exon e_start="89155" e_stop="89211"/>
          <exon e_start="89307" e_stop="89549"/>
          <exon e_start="90097" e_stop="90118"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATCCATTGAAAATGCATAAATTATTTGCAGTAAGGTCCTTGAGTTCTACCATAGCCAAAAACTTCAAGTCCCTACAAAATCAACAAGCTGCTTTTTCAACTTCATTACTATTGGATGATACTCAAAAACAGGTAAAAAGAAAATTATACTTGTACCACAATTTTTCATTTTAATTGAAATTGAAGGACCAAATTATAAGTTAAGTTAACTTTGAGGGGGGTAAGTTTACTATTTTACATGATTTACTAATTATATTTTGTTTGCATAAATTTTGTAGTTTAAAGAAAGTGTAGCAAAATTTGCTCAAGAGAATATAGCTCCTTATGCTGAAAAGATTGATAGAACAAACAGTTTCCCAAAGGTTAATAAATTCATTATCTTTAATTATATGATTAAAGTTTAAAAAAAATTAATCAAAATATGGTTATAGAGATTAATTATTTGTATATTTCATGATTTTCGTTCAGGAGATTAACTTGTGGAAATTGATGGGAGACTTTAATTTACATGGAATTACAGCACCAGGTAAAATTAATGATATGATAATATAAAAATTCTTATGATAACAATGTATATAATATAAGATAAGAATATATGTTATTTAATTATGATTAATTATAAATAAATGTCCTTTTCAAAGCAAAAGACCAGAGGCAGAGACTAGTTAAATGGAATAAATGGTGCTATGGATGGAAGTTATAAATAACCCGTAATTTTTATGGGTTGGATTCAAAATAATTTAAATTTAAATAAATTTTAACTCAATATTCAAAGTGTTGTCCTTTTCAAAATGATTGCCAGTGAAGTTCAATTTAATTCTCAACTTCAACTTATTTTTTATATTTACTAGCTAAATCACATATTTTACCCAAATATTTTTCATTCATCTAATATAATTGGGTCTCGAATTCTACATCAAGATCTAATCTTGAGTCCCGATTGACCCAAGTCAAGATCTGAGTCGGATCTCAGATTTGGGCCTAGGCTCATATCTTGGGTCTTGGGTCAAGGTTAGGGTTTGGATGTTGGGTTGAGTTTTGAGTCAAATATCAAATCTCAACTTACGTCTTTTGGAGTAAGAGTCAAATCTCAAGTTGACAGTCACATCAAATCAGGTCTTGAGTCGGGGCTCATGTCTTTAAGTCTCGAGTTGCTTTGGGGTTGGGCCTCAAATCCCGAGTCCCAATCAAGCTTGGATCTCGAATTCCAAGTCAGGTTCGAGTCTCGAGTCAAAAAATATGATAATCCCCTACAACTTGTTATTAACATATCAAAATCTCATGAATAAATAATCATATCGTAAAAAACAAACATCAAAATTCCCACTATACATTATTATATAATATAGATTTTAGTGAAACTTTGTACAGGCCAATTATTAATTTTTTAAATAATAACATATTCCAATTGGAGAAAAAACTGTAATATACGTAACATCGCAGAAAACAATGACATCTATCATCATCTCTTGTAAAAGCATTTCCCAATAATATTACTATTATGATCAATTATTTCCACAAAATAATGTCATAAAAAACAAGTGGACAATTATATTTCTAACAAAGTGAACAGAAATTTTAGATATTACACTCATAAATACTATTATTTATATATAAAAATTTAGCTAGTATTTGAGTTCTGTTGAACGTATAACAGAGGAATATGGTGGTCTCAACCTTGGATATTTATATCATTGCATTGCCTTAGAAGAAATTAGTCGTGCATCTGGTGCTGTTGCTGTTTCCTATGGTGTTCAATCCAACGTTTGCATTAACCAATTGGTAACTATTATATTTTTTATATATATATATATAATATGCTTTATAGGTACAGCACAACATGTCCTTGTACCGTGTACGTTGACGTGACGATTAAATTTTAATGACATTTTTAATTTGTAGGTTAGAAATGGAACCCCTGAGCAGAAACAAAAATATTTGCCAAAGGTTCTACGAATTTTATCTCTCTTACTTTCTTTTAATTTTTTGAATTTTGATATGCACGAAATTTAAAAAAAAAATCGAATCATCAGAATCTATCGTCTAACTCACTTTGATTGTGTCATGAAGCTTATAAGTGGGGATCACATTGGGGCTCTAGCCATGAGTGAACCAAATGGTAATTTGTTGTAATTAATTTACTTTCATTATCAAAATTTACTTTTACTTATAATTATAACCTAATACATAAATACTGTCGATGCATAGAAATTAAATGATATTAATAACACTTTTTTTTTTACTTTGATCAGCTGGGTCAGATGTTGTTAGCATGAAGTGTCGAGCCGATCGTGTCGATGGTGGCTATGTTTTAAATGGAAATAAAATGTGGTGCACCAATGGTCCTATCGCTAATACTTTGGTATATATATCTCTTCGTAATTATTATTTTATTACGTTCATTTTTACTTGTTCAGTATTAAATTGACACACCTTACAGAGTAAAAGTAGACGAAGGAAGTTGTAGACTCCTTTTTTTTTTCCCTTTTTCCAACTTGATATTTAGACACAAATTGATCTACTATTTTAATTTCGTATTCATATTTTAATTTTTCATGTTACATTATTAAATTTTGTGTTTAACTTATTAATCAGATTGTTTATGCAAAAACGGATACTACTGCTGGTTCTAAAGGAATTACAGCATTTATAATCGAAAAAGAAATGTCAGGGTACGTACCTCACATTTGTAAAATTCAAATTCTGAATCCGTTATCTTTACACTCGTATATAAGAAAACCACCATAAATAACTTTTTCTATTTAATTTCATAACTATGTTGAAAATGCAGATTCTCAACTGCACAAAAATTGGACAAACTTGGGATGAGAGGAAGCGATACGTAAGTTTAAATTAATAATATCGAGTGAATTGCTAGTTCCTGAGCACTATTTTTTTTTTAGCGTAGCTAGCAATTCACCCGATAATAAATATTGATGAAATTGTAGTAAATCTCATATGGACTCAAAAATTGCAGGTGTGAACTTGTATTCGAGAATTGCTTTGTTCCTAAGGAAAATGTTTTAGGCCACGAAGGAAAAGGTAAAAAAAAAAATGATACTGTATGTATACATCATTTATCTCATCACGTATATTAATTTCTCAATTTTTCGTATGTACAGGAGTGTATGTTTTAATGTCGGGGCTAGATTTGGAACGACTTATTTTAGCAGCAGGACCTATTGGAATAATGCAAGCATGTATGGATATTGTTATTCCTTACGTTCAACAAAGGGAGCAATTTGGAAGACCAATCGGCGAATTTCAACTTATACAGGTATATGTATAACTGTAATAATATCTTTTAAGCCACTAATTTTATTGAGTCGCTCTTTAATTCAAAACTTTTTTTTTCCAATCCAGGGAAAACTAGCTGACATGTATACTGCTTTACAATCTTCAAGGTTAGAATTTCTTTCGAATTAAATTGTTTTTCTTTTTAAATAGTAAATTCATATTTTTATGTCAATTATTTTTTATTGTATTTTTCAGATCATATGTGTATGCTGTTGCAAAGGACTGTGACAATGGGAAGATTGATCCAAAGGTTTTTTTAAAAAAAAATATATATTTTGTGTCATTTAGAAGTTTTTATAACTTATTTCTAAGTTCGTAATTTTATTTTATTTTTCAGGATTGTTCTGGGACTATACTACTGGCAGCTGAAAGAGCCACTCAAGTAGCTCTCCAGGTGAAAAAAAAAAGAAGCTTTTTTTTAACGTGAAATTGTCGATATATATAATTTAAATTTGTGTTTGATACGTTACGTTTTAAATGAAATTACAGGCAATTCAATGTCTAGGTGGAAATGGATATATAAATGAGTATCCAACAGGACGTTTACTGCGAGATGCCAAAATGTATGAGATTGCAGCAGGAACTAGTGAAATAAGAAGAATTATAATTGGTCGTGAGCTATTTAAACATCAATAATTAGTTACAAATTAAAATTAATTAGGGGATCCTACATGATTTAATTTC-T-TTA-A---AAAAAAAATTGTATGTTCAATCAACAAATTATAT-GTCACGTATGTTGTTCTCAATGTTTAAAGAAAAGAAGAGTCAAAACTAATAGCACTACTGTTATCCTAACATTCTATCCTTTTCAAACCTTTCTATAGTACGATTATAATTTATAAGAAAACGGAAACAAATACTTCGGGATATCTTATAGGACTGTTTGATAAATGTCATTAGAACCAATATCGCTAAAGACTTTAGAAACATGTACAAAAAGCATTAACCGATCATCAAAATTTTTTATGTATACCCACTTACCCGTCTAAATTCCATATGTAAGATATTCATCTTTCATATTCCTATAAAATTTGTTACTTAAGACTCTCTTAAGTAACAACTATACCTTGACTACCCATGACAATCATAAGGACGTTAAGCAAGCAAATGGAAATACACACAAAGAAAGGACAACAAAATAGAGTTTAAAAAGGTCTCAATTATCTCAAAGTTCTAAAACTAGTTTTTTTTTTTTTTTGGTAGTTTTACATTTTTTTATTTTTTTTTTTCATTTTTATTTTGTTTTCAACTTCCTCCTATATGTACACCTTATAATCCTAAGATGAAAGTACAAAAAGGCACAA</genome_strand>
        <mrna_strand>AAAACACCATAGAAAATGCATAAATTATTTGCAGTAAGGTCCTTAAGTTCTGCCATAGCCAAAAACTTCAAGTCCCTACAAAATCAACAAGCTGCTTTTTCTACTTCATTACTATTGGATGATACTCAAAAACAG..................................................................................................................................................TTTAAAGAAAGTGTAGCAAAATTTGCTCAAGAGAATATAGCTCCTTATGCTGAAAAGATTGACAGAACAAACAGTTTCCCAAAG..........................................................................................................GAGATTAACTTATGGAAATTGATGGGGGACTTTAATTTGCATGGAATTACTGCACCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATATGGTGGTCTCAACCTTGGATATTTATATCACTGCATTGCCTTAGAAGAAATTAGTCGTGCATCTGGTGCTGTTGCTGTTTCCTATGGTGTTCAATCCAACGTTTGCATCAACCAATTG........................................................................................................................GTGAGAAATGGAACCCCTGACCAGAAGCAAAAATATTTACCAAAG...........................................................................................................................CTTATAAGTGGGGATCACATTGGGGCTCTAGCCATGAGTGAACCAAATG.....................................................................................................................................CTGGGTCAGATGTTGTTAGCATGAAGTGTCGAGCCGATCGTGTCGATGGTGGCTATGTTTTAAATGGAAATAAAATGTGGTGCACCAATGGTCCTGTCGCTAATACTTTG.........................................................................................................................................................................................................................................ATTGTTTATGCAAAAACGGATACGACTGCTGGTTCAAAAGGAATTACAGCATTTATCATCGAAAAAGAAATGCCAGG.......................................................................................................................ATTCTCAACTGCACAGAAATTGGACAAACTTGGGATGCGAGGAAGCGATAC.......................................................................................................................................GTGTGAACTTGTATTCGAGAATTGCTTTGTTCCTAAAGAAAATGTTCTAGGGCAGGAAGGAAAAG................................................................................GAGTGTATGTTCTAATGTCGGGGCTAGATTTAGAACGACTTGTTTTAGCAGCAGGACCAGTTGGAATAATGCAGGCATGTATGGATATTGTTATTCCTTACGTTCGACAAAGGGAGCAATTTGGAAGACCAATCGGCGAATTTCAACTTATACAG......................................................................................GGAAAACTCGCTGACATGTATACTGCTTTACAATCTTCAAG........................................................................................ATCATATGTGTATGCTGTTGCAAAGGATTGTGACAACGGGAAGATTGATCCAAAG.......................................................................................GATTGTTCTGGGACCATACTACTTGCAGCTGAAAGAGCTACTCAAGTTGCTCTTCAG...............................................................................................GCAATTCAATGTCTAGGTGGAAATGGATATATAAATGAATATCCAACAGGACGTTTACTAAGAGATGCCAAAATGTATGAGATTGCAGCAGGAACAAGTGAAATAAGAAGACTTGTAATTGGTCGTGAGCTCTTTAAACATCAATAAGTAATTACAAATTATAATTAATTAGGGGATCCTACATTATTTAATTTCTTCTTATATCCCCAAAAAATTGTATGTTTAATCAATAAATTATATATTCACGTAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E349885" ref_strand="+" ref_description="SGN-E349885 [cTOS-3-A9]">
      <seq>gatggagtgcctatttagattttatagttacggtttggaaaaggaatttagagaggacctttatgacgactttgagagattgacgcttgacacctacaataggggaaacctttacggccttgagaagtactgggcctttcaccatttccgtcagcaacgaggtcagagagcacctttgaagaagcttccagaactggatagactactcagagaagagttccgaaatttggatgactttaaacatgccagaggaggtgccagtgcaagcacaaaggaggacggtcactaaccaacagtgtgattctcagcttcattgaaccgtctgtcagcgaattttgatgccttacagtccatacaatgagctcaagttgccgaattagctttctgagatgatcaaggcaaaaattttgtatatagagcttctgtgaggttggttaatttttacctccgaggttgagctaaaattttaccatgaggggatgcaaccttgtgcctttttgtactttcatcttaggattataaggtgtacatataggaggaagttgaaaacaaaataaaaatgaaaaaaaaaaataaaaaaatgtaaaactaccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="92294" stop="89703"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91994" g_stop="91968" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91967" i_stop="91773" i_length="195">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91772" g_stop="91668" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="132" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91667" i_stop="90474" i_length="1194">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.906" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90473" g_stop="90003" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="603" r_length="471" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E349885" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>603</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349885" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91994" e_stop="91968"/>
          <exon e_start="91772" e_stop="91668"/>
          <exon e_start="90473" e_stop="90003"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGGAGTGCCTATTTAGATTTTATAGGTAGTGTTTACATGCTATTGTGACTTGCATGGAAAGAAGGGGAGAAATATGACATGTTTTGTTTTCCCTTTTACTTTTAAACCCTTCAGCTGTTCTTTTCTAGATCCACCTCCATGTGATGCAACTTCAACAGTTACTTTCTTTTCCTTCTGACATACTTATTTGACTGCTCATTATACTGTGTTTGTGTTTCAGTTACGGTTTGGAAAAGGAATTTAGAGAGGACCTTTATGACGACTTTGAGAGATTGACGCTTGACACCTACAATAGGGGAAACCTTTACGGCCTTGAGAAGTACTGGTAATATACCTTACCTTGTTTGAAAGTTCTCGTTTCCGTGTCCTTTCCTCCTTTTTTTTTTTTTGTGAAAACTATGAGACTCCGACTGATATTGAAGGATCAAAACACTGGGAATTAAGGTATCATGTGGATAGGATGCTCTTTTATAGTAATTGTTTAAGCCCCAAATTAGAACCTATGTTTTCTGAATCATTTTAAGCCTCTGATTACTTGCCTTTCCAATTTTAGATTCACTTCATTCAGTGATCCATGTTCTGTGTTTTTTTAATCTCTTAATTTTAGAGAGGCAATGCTCCCTTAAAAAATGGTTTCTGAATACAGCATTATTCATAGCCAACTGTAACACGAATGGAAGAGTTTACTTTGAATCGTTTCTTCCAGGCTTGATTTTGTTTGCTTTTCTTTTTTCCCTTCCAAGTTCCTGTAGTTTCTTCTTGTGCATTTTGATCTTCTTTTTCTTCTCTCGTTCTCCTCCCCTGGGACCCCCACAGCTTCGGTATTAAGCATCATGGTGACATGCCATGATCAATTTTTGCTGCCTTCTTTAGAGGAACTCCTGGTTGTGAAGCTCTTGTTGATCTATCACACAGGAAATTACACCAATGACCTTGGAAATTGATGATCTCGAACTTTTGACCTCTTCTTTTGCGCCATGGGCAAAACTTCAAGGGATCTCCCTCTATCACAGCAGTAAGGGACTTTGAAAGAATCCCTTAATAGTGGACTGTAGTTTTGAGTGACTATTGCTTGCTTGCTTAAGCGTCCGCGCAACTTAGGTTACTGCTGCAAATGAAGTGTGTTACTGAAACCAACATATACCTGTAACCTAAGTTGCAAATGAAGAAGCTAGCGATCATAACCTTCAATAATGAACTTGAGACCAATTGAACCATGAGCACTTCTGACTCAAGTAAAACAAAACATATACCTTATAGTGGACTTTAGTTCTGAGTGACTATTGAATAAAAAGTGGGGAGGATTCCCCATGTACACGAATGGGGCATATAGTGCATCCGACCACCTTTTCCCTTTGTTAAAAGGAAAAACTCGGGTATGTCGGGGAAGGTGTTGCGGACAGGCTGATTTAGAGATGATATTGTACACATCAACTTTGCTTTTGTTGATACCTAGATTTTTTATTGGAAGTATTTTTATGCTCTTACTAACATGATCTTACTGCAATCATTCTGGAAGGGCCTTTCACCATTTCCGTCAGCAACGAGGTCAGAGAGCACCTTTGAAGAAGCTTCCAGAACTGGATAGACTACTCAGAGAAGAGTTCCGAAATTTGGATGACTTTAAACATGCCAGAGGAGGTGCCAGTGCAAGCACAAAGGAGGACGGTCACTAACCAACAGTGTGATTCTCAGCTTCATTGAACCGTCTGTCAGCGAATTTTGATGCCTTACAGTCCATACAATGAGCTCAAGTTGCCGAATTAGCTTTCTGAGATGATCAAGGCAAAAATTTTGTATATAGAGCTTCTGTGAGGTTGGTTAATTTTTACCTCCGAGGTTGAGCTAAAATTTTACCATGAGGGGATGCAACCTTGTGCCTTTTTGTACTTTCATCTTAGGATTATAAGGTGTACATATAGGAGGAAGTTGAAAACAAAATAAAAATGAAAAAAAAAAATAAAAAAATGTAAAACTACCAAAAAAAAAA</genome_strand>
        <mrna_strand>GATGGAGTGCCTATTTAGATTTTATAG...................................................................................................................................................................................................TTACGGTTTGGAAAAGGAATTTAGAGAGGACCTTTATGACGACTTTGAGAGATTGACGCTTGACACCTACAATAGGGGAAACCTTTACGGCCTTGAGAAGTACTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTTTCACCATTTCCGTCAGCAACGAGGTCAGAGAGCACCTTTGAAGAAGCTTCCAGAACTGGATAGACTACTCAGAGAAGAGTTCCGAAATTTGGATGACTTTAAACATGCCAGAGGAGGTGCCAGTGCAAGCACAAAGGAGGACGGTCACTAACCAACAGTGTGATTCTCAGCTTCATTGAACCGTCTGTCAGCGAATTTTGATGCCTTACAGTCCATACAATGAGCTCAAGTTGCCGAATTAGCTTTCTGAGATGATCAAGGCAAAAATTTTGTATATAGAGCTTCTGTGAGGTTGGTTAATTTTTACCTCCGAGGTTGAGCTAAAATTTTACCATGAGGGGATGCAACCTTGTGCCTTTTTGTACTTTCATCTTAGGATTATAAGGTGTACATATAGGAGGAAGTTGAAAACAAAATAAAAATGAAAAAAAAAAATAAAAAAATGTAAAACTACCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E701798" ref_strand="+" ref_description="SGN-E701798 [FA16DH08]">
      <seq>tgcagtaaaaaacactgaaggtcctggaagttccaactcccggagaaagcaaaacaaaggatttgctaagccacatccaatacataagcagcggctgttttctggaaattaccggaatcatggggtttctcggaacagtgtaggagcaatatctgaaagtccacctagcgattcagttgggtttttctttggttctacacctcctgacagtcatgtgtctaggccttcaaagttgagtgcctctccgcacagcaatcttgctagtaatagtccgccagttggttccatgcctaaaccatttccacccttccagcatccaagtcacaagctgctacaagaaaatggttttacacagcagctgtacaagaagtatcataagcgctgtctgactgatcgcaagaaacttggaattggttgcagtgaggaaatgaatacactgtacaggttttggtcgtattttctgcggaacatgttcatacgttctatgtacaatgagttccaaaagatggctcaagaagatgcagctgctaattataactatgggatggagtgcctatttagattttatagttacggtttggaaaaggaatttagagaggacctttatgacgactttgagagattgacgcttgacacctacaataggggaaacctttacggccttgagaagtactgggcctttcaccatttccgtcagcaacgaggtcagagagcacctttgaagaagcttccagaactggatagactactcagagaagagttccgaaatttggatgactttaaacatgccagaggaggtgccagtgncagcacaaaggagtacggtcactaaccaacagtgtgattctcagcttcattgaaccgtctgtcagcgaattttgatgccttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="93999" stop="89959"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93699" g_stop="93484" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93483" i_stop="93304" i_length="180">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93303" g_stop="93160" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="360" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93159" i_stop="92997" i_length="163">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92996" g_stop="92933" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="424" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="92932" i_stop="92114" i_length="819">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92113" g_stop="91968" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="570" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="91967" i_stop="91773" i_length="195">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="91772" g_stop="91668" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="571" r_stop="675" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="91667" i_stop="90474" i_length="1194">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.906" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="90473" g_stop="90259" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="676" r_stop="890" r_length="215" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E701798" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>890</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E701798" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93699" e_stop="93484"/>
          <exon e_start="93303" e_stop="93160"/>
          <exon e_start="92996" e_stop="92933"/>
          <exon e_start="92113" e_stop="91968"/>
          <exon e_start="91772" e_stop="91668"/>
          <exon e_start="90473" e_stop="90259"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGGAAAAAACACTGAAGGTCCTGGAAGTTCCAACTCCCGGAGAAAGCAAAACAAAGGATTTGCTAAGCCACATCCAATACATAAGCAGCGGCTGTTTTCTGGAAATTACCGGAATCATGGGGTTTCTCGGAACAGTGTAGGAGCAATATCTGAAAGTCCACCTAGCGATTCAGTTGGGTTTTTCTTTGGTTCTACACCTCCTGACAGTCATGTGTATGTTCTGGATCCCTGGTGTTGTTCTAATGTAGTTGTGTATTGTAATATGTTTGAGATTATTTAATTATTTTGTCAAAGAGCAAATGCAAGTCTATGAATATATGATTATTAGGGACATTGTGAAAACAGTTCTGGGTTGTTACACAATAACTTAGTTACCTGAACTTCTGTTTACAGGTCTAGGCCTTCAAAGTTGAGTGCCTCTCCGCACAGCAATCTTGCTAGTAATAGTCCGCCAGTTGGTTCCATGCCTAAACCATTTCCACCCTTCCAGCATCCAAGTCACAAGCTGCTACAAGAAAATGGTTTTACACAGCAGCTGTGAGTAGATTTACTTTCAATAGGAGTTGGTGTTCTATGCATTTTGTATTCAAGTGCATGCATCTGTTCATGCGCGGGTCTGCATGTGCACTGACTTATACATATATTCCTTGTGCATCTCTTTTCGCTCCTGAACGTTGGTTTTGGATTTTCCATCTTTTAGGTACAAGAAGTATCATAAGCGCTGTCTGACTGATCGCAAGAAACTTGGAATTGGTTGCAGTGAGGTGCCTACTTAATTTTTGTTCTGCATTGGCTTGTGTTTGATGTACTAGTTCCATAATAGCATCACCGTCTCCTTGAGGATTACAGAAAGGAAACAAAGAGGAAATATATTAAATTTAATAACAGTGAATTGCTTCTTGTATAAGGGCATAAAATGTGAGGAATTTATCACTCTTATTCTGCAAGTTCATTTCAGGGGTGGGATATGAAAATAAAGATGACTAATCTCTTTATGTATAATGTGAAATTTGTTTCATGATTTCATTGACTTCCTTGAGGTTTTTGTTTTGACCAGTCAAAGCTCATCTTATTATTGCTGCACCAAGATAGTAACAAAATATTACTAGAATGTTCTAACATTAGGTCTCTGAGAAATTTATCCAAGTATTGACACAGAGAAAATTTCCAGTGCCCTCATGAAGAAAAACAAATTTTCCAGTACCTAGAAGGTACTCTTTGTTTAAAACCCACTTATGAAGCAAATCTTCACAAGTAGTACTATTCTTTACCTAAAAGGTACTGTTTGTTGGTAGATCCAATTTTAAAATAGATCTGTACAAAAAGAACAGTTCTCTTGAATTTGCAAACCTTGTATTGCTTGAAAGGAATCATATGAATGCTTACAAACTTTATAAATGAACAATATTCTTACTAACCAATTGGCTGAACTCATAATGAGAGGTTTCTAACTCATCTCTGTCTATGCATACACACATGTATGATGCATCTATTTGTCCATATACTGCTTATTTGGCTGTTTACTTCTGTGCTAAATTGCATAAATTAATTTTCTCTAAAGGTTCTTATCTTTTGACATGCAGGAAATGAATACACTGTACAGGTTTTGGTCGTATTTTCTGCGGAACATGTTCATACGTTCTATGTACAATGAGTTCCAAAAGATGGCTCAAGAAGATGCAGCTGCTAATTATAACTATGGGATGGAGTGCCTATTTAGATTTTATAGGTAGTGTTTACATGCTATTGTGACTTGCATGGAAAGAAGGGGAGAAATATGACATGTTTTGTTTTCCCTTTTACTTTTAAACCCTTCAGCTGTTCTTTTCTAGATCCACCTCCATGTGATGCAACTTCAACAGTTACTTTCTTTTCCTTCTGACATACTTATTTGACTGCTCATTATACTGTGTTTGTGTTTCAGTTACGGTTTGGAAAAGGAATTTAGAGAGGACCTTTATGACGACTTTGAGAGATTGACGCTTGACACCTACAATAGGGGAAACCTTTACGGCCTTGAGAAGTACTGGTAATATACCTTACCTTGTTTGAAAGTTCTCGTTTCCGTGTCCTTTCCTCCTTTTTTTTTTTTTGTGAAAACTATGAGACTCCGACTGATATTGAAGGATCAAAACACTGGGAATTAAGGTATCATGTGGATAGGATGCTCTTTTATAGTAATTGTTTAAGCCCCAAATTAGAACCTATGTTTTCTGAATCATTTTAAGCCTCTGATTACTTGCCTTTCCAATTTTAGATTCACTTCATTCAGTGATCCATGTTCTGTGTTTTTTTAATCTCTTAATTTTAGAGAGGCAATGCTCCCTTAAAAAATGGTTTCTGAATACAGCATTATTCATAGCCAACTGTAACACGAATGGAAGAGTTTACTTTGAATCGTTTCTTCCAGGCTTGATTTTGTTTGCTTTTCTTTTTTCCCTTCCAAGTTCCTGTAGTTTCTTCTTGTGCATTTTGATCTTCTTTTTCTTCTCTCGTTCTCCTCCCCTGGGACCCCCACAGCTTCGGTATTAAGCATCATGGTGACATGCCATGATCAATTTTTGCTGCCTTCTTTAGAGGAACTCCTGGTTGTGAAGCTCTTGTTGATCTATCACACAGGAAATTACACCAATGACCTTGGAAATTGATGATCTCGAACTTTTGACCTCTTCTTTTGCGCCATGGGCAAAACTTCAAGGGATCTCCCTCTATCACAGCAGTAAGGGACTTTGAAAGAATCCCTTAATAGTGGACTGTAGTTTTGAGTGACTATTGCTTGCTTGCTTAAGCGTCCGCGCAACTTAGGTTACTGCTGCAAATGAAGTGTGTTACTGAAACCAACATATACCTGTAACCTAAGTTGCAAATGAAGAAGCTAGCGATCATAACCTTCAATAATGAACTTGAGACCAATTGAACCATGAGCACTTCTGACTCAAGTAAAACAAAACATATACCTTATAGTGGACTTTAGTTCTGAGTGACTATTGAATAAAAAGTGGGGAGGATTCCCCATGTACACGAATGGGGCATATAGTGCATCCGACCACCTTTTCCCTTTGTTAAAAGGAAAAACTCGGGTATGTCGGGGAAGGTGTTGCGGACAGGCTGATTTAGAGATGATATTGTACACATCAACTTTGCTTTTGTTGATACCTAGATTTTTTATTGGAAGTATTTTTATGCTCTTACTAACATGATCTTACTGCAATCATTCTGGAAGGGCCTTTCACCATTTCCGTCAGCAACGAGGTCAGAGAGCACCTTTGAAGAAGCTTCCAGAACTGGATAGACTACTCAGAGAAGAGTTCCGAAATTTGGATGACTTTAAACATGCCAGAGGAGGTGCCAGTGCAAGCACAAAGGAGGACGGTCACTAACCAACAGTGTGATTCTCAGCTTCATTGAACCGTCTGTCAGCGAATTTTGATGCCTTAC</genome_strand>
        <mrna_strand>TGCAGTAAAAAACACTGAAGGTCCTGGAAGTTCCAACTCCCGGAGAAAGCAAAACAAAGGATTTGCTAAGCCACATCCAATACATAAGCAGCGGCTGTTTTCTGGAAATTACCGGAATCATGGGGTTTCTCGGAACAGTGTAGGAGCAATATCTGAAAGTCCACCTAGCGATTCAGTTGGGTTTTTCTTTGGTTCTACACCTCCTGACAGTCATGT....................................................................................................................................................................................GTCTAGGCCTTCAAAGTTGAGTGCCTCTCCGCACAGCAATCTTGCTAGTAATAGTCCGCCAGTTGGTTCCATGCCTAAACCATTTCCACCCTTCCAGCATCCAAGTCACAAGCTGCTACAAGAAAATGGTTTTACACAGCAGCT...................................................................................................................................................................GTACAAGAAGTATCATAAGCGCTGTCTGACTGATCGCAAGAAACTTGGAATTGGTTGCAGTGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATGAATACACTGTACAGGTTTTGGTCGTATTTTCTGCGGAACATGTTCATACGTTCTATGTACAATGAGTTCCAAAAGATGGCTCAAGAAGATGCAGCTGCTAATTATAACTATGGGATGGAGTGCCTATTTAGATTTTATAG...................................................................................................................................................................................................TTACGGTTTGGAAAAGGAATTTAGAGAGGACCTTTATGACGACTTTGAGAGATTGACGCTTGACACCTACAATAGGGGAAACCTTTACGGCCTTGAGAAGTACTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTTTCACCATTTCCGTCAGCAACGAGGTCAGAGAGCACCTTTGAAGAAGCTTCCAGAACTGGATAGACTACTCAGAGAAGAGTTCCGAAATTTGGATGACTTTAAACATGCCAGAGGAGGTGCCAGTGNCAGCACAAAGGAGTACGGTCACTAACCAACAGTGTGATTCTCAGCTTCATTGAACCGTCTGTCAGCGAATTTTGATGCCTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E560688" ref_strand="+" ref_description="SGN-E560688 [20382]">
      <seq>gatttgctaagccgcatccaatacataagcagcggctgttttctggaaattaccggaatcatggcgtttctcggaacagtgtaggaacaatatctgaaagtccacctagcgattcagttgggtttttctttggttctacacctcttgacagtcatgtgtcaaggccttcaaagttgagtgcctctccgcacagcaatcttgcaagtagtagtccgcctgtgggttccatgcctaaaccatttccacccttccaacatccaagtcacaagctgctacaagaaaatggttttacacaacagctgtacaagaagtatcataagcgctgtctgaatgatcgcaagaaacttggagttggttgcagtgaggaaatgaatacactgtacaggttttggtcgtattttctgcggaacatgttcatacgttctatgtacaatgaattccaaaagatggctcaagaagatgcagctgctaattataactatgggatggagtgcctatttagattttatagttatggtttggaaaaggaatttagagagggcctttatgacgactttgagagattgacacttgacacctacaataggggaaacctttacgggcttgagaagtactgggcctttcagcattttcgtcagcaacgaggtcagagagcacctttgaagaagcttccagaactggatagactactcagagaagagttcggaaatttggatgacttcaaacatgctag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="93940" stop="90057"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93640" g_stop="93484" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="157" r_length="157" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93483" i_stop="93304" i_length="180">
            <donor d_prob="0.966" d_score="0.98"/>
            <acceptor a_prob="0.976" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93303" g_stop="93160" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="301" r_length="144" r_score="0.951"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93159" i_stop="92997" i_length="163">
            <donor d_prob="0.922" d_score="0.96"/>
            <acceptor a_prob="0.983" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92996" g_stop="92933" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="365" r_length="64" r_score="0.969"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="92932" i_stop="92114" i_length="819">
            <donor d_prob="0.965" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92113" g_stop="91968" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="511" r_length="146" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="91967" i_stop="91773" i_length="195">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="91772" g_stop="91668" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="512" r_stop="616" r_length="105" r_score="0.962"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="91667" i_stop="90474" i_length="1194">
            <donor d_prob="0.983" d_score="0.96"/>
            <acceptor a_prob="0.906" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="90473" g_stop="90357" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="617" r_stop="733" r_length="117" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E560688" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>733</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E560688" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93640" e_stop="93484"/>
          <exon e_start="93303" e_stop="93160"/>
          <exon e_start="92996" e_stop="92933"/>
          <exon e_start="92113" e_stop="91968"/>
          <exon e_start="91772" e_stop="91668"/>
          <exon e_start="90473" e_stop="90357"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTTGCTAAGCCACATCCAATACATAAGCAGCGGCTGTTTTCTGGAAATTACCGGAATCATGGGGTTTCTCGGAACAGTGTAGGAGCAATATCTGAAAGTCCACCTAGCGATTCAGTTGGGTTTTTCTTTGGTTCTACACCTCCTGACAGTCATGTGTATGTTCTGGATCCCTGGTGTTGTTCTAATGTAGTTGTGTATTGTAATATGTTTGAGATTATTTAATTATTTTGTCAAAGAGCAAATGCAAGTCTATGAATATATGATTATTAGGGACATTGTGAAAACAGTTCTGGGTTGTTACACAATAACTTAGTTACCTGAACTTCTGTTTACAGGTCTAGGCCTTCAAAGTTGAGTGCCTCTCCGCACAGCAATCTTGCTAGTAATAGTCCGCCAGTTGGTTCCATGCCTAAACCATTTCCACCCTTCCAGCATCCAAGTCACAAGCTGCTACAAGAAAATGGTTTTACACAGCAGCTGTGAGTAGATTTACTTTCAATAGGAGTTGGTGTTCTATGCATTTTGTATTCAAGTGCATGCATCTGTTCATGCGCGGGTCTGCATGTGCACTGACTTATACATATATTCCTTGTGCATCTCTTTTCGCTCCTGAACGTTGGTTTTGGATTTTCCATCTTTTAGGTACAAGAAGTATCATAAGCGCTGTCTGACTGATCGCAAGAAACTTGGAATTGGTTGCAGTGAGGTGCCTACTTAATTTTTGTTCTGCATTGGCTTGTGTTTGATGTACTAGTTCCATAATAGCATCACCGTCTCCTTGAGGATTACAGAAAGGAAACAAAGAGGAAATATATTAAATTTAATAACAGTGAATTGCTTCTTGTATAAGGGCATAAAATGTGAGGAATTTATCACTCTTATTCTGCAAGTTCATTTCAGGGGTGGGATATGAAAATAAAGATGACTAATCTCTTTATGTATAATGTGAAATTTGTTTCATGATTTCATTGACTTCCTTGAGGTTTTTGTTTTGACCAGTCAAAGCTCATCTTATTATTGCTGCACCAAGATAGTAACAAAATATTACTAGAATGTTCTAACATTAGGTCTCTGAGAAATTTATCCAAGTATTGACACAGAGAAAATTTCCAGTGCCCTCATGAAGAAAAACAAATTTTCCAGTACCTAGAAGGTACTCTTTGTTTAAAACCCACTTATGAAGCAAATCTTCACAAGTAGTACTATTCTTTACCTAAAAGGTACTGTTTGTTGGTAGATCCAATTTTAAAATAGATCTGTACAAAAAGAACAGTTCTCTTGAATTTGCAAACCTTGTATTGCTTGAAAGGAATCATATGAATGCTTACAAACTTTATAAATGAACAATATTCTTACTAACCAATTGGCTGAACTCATAATGAGAGGTTTCTAACTCATCTCTGTCTATGCATACACACATGTATGATGCATCTATTTGTCCATATACTGCTTATTTGGCTGTTTACTTCTGTGCTAAATTGCATAAATTAATTTTCTCTAAAGGTTCTTATCTTTTGACATGCAGGAAATGAATACACTGTACAGGTTTTGGTCGTATTTTCTGCGGAACATGTTCATACGTTCTATGTACAATGAGTTCCAAAAGATGGCTCAAGAAGATGCAGCTGCTAATTATAACTATGGGATGGAGTGCCTATTTAGATTTTATAGGTAGTGTTTACATGCTATTGTGACTTGCATGGAAAGAAGGGGAGAAATATGACATGTTTTGTTTTCCCTTTTACTTTTAAACCCTTCAGCTGTTCTTTTCTAGATCCACCTCCATGTGATGCAACTTCAACAGTTACTTTCTTTTCCTTCTGACATACTTATTTGACTGCTCATTATACTGTGTTTGTGTTTCAGTTACGGTTTGGAAAAGGAATTTAGAGAGGACCTTTATGACGACTTTGAGAGATTGACGCTTGACACCTACAATAGGGGAAACCTTTACGGCCTTGAGAAGTACTGGTAATATACCTTACCTTGTTTGAAAGTTCTCGTTTCCGTGTCCTTTCCTCCTTTTTTTTTTTTTGTGAAAACTATGAGACTCCGACTGATATTGAAGGATCAAAACACTGGGAATTAAGGTATCATGTGGATAGGATGCTCTTTTATAGTAATTGTTTAAGCCCCAAATTAGAACCTATGTTTTCTGAATCATTTTAAGCCTCTGATTACTTGCCTTTCCAATTTTAGATTCACTTCATTCAGTGATCCATGTTCTGTGTTTTTTTAATCTCTTAATTTTAGAGAGGCAATGCTCCCTTAAAAAATGGTTTCTGAATACAGCATTATTCATAGCCAACTGTAACACGAATGGAAGAGTTTACTTTGAATCGTTTCTTCCAGGCTTGATTTTGTTTGCTTTTCTTTTTTCCCTTCCAAGTTCCTGTAGTTTCTTCTTGTGCATTTTGATCTTCTTTTTCTTCTCTCGTTCTCCTCCCCTGGGACCCCCACAGCTTCGGTATTAAGCATCATGGTGACATGCCATGATCAATTTTTGCTGCCTTCTTTAGAGGAACTCCTGGTTGTGAAGCTCTTGTTGATCTATCACACAGGAAATTACACCAATGACCTTGGAAATTGATGATCTCGAACTTTTGACCTCTTCTTTTGCGCCATGGGCAAAACTTCAAGGGATCTCCCTCTATCACAGCAGTAAGGGACTTTGAAAGAATCCCTTAATAGTGGACTGTAGTTTTGAGTGACTATTGCTTGCTTGCTTAAGCGTCCGCGCAACTTAGGTTACTGCTGCAAATGAAGTGTGTTACTGAAACCAACATATACCTGTAACCTAAGTTGCAAATGAAGAAGCTAGCGATCATAACCTTCAATAATGAACTTGAGACCAATTGAACCATGAGCACTTCTGACTCAAGTAAAACAAAACATATACCTTATAGTGGACTTTAGTTCTGAGTGACTATTGAATAAAAAGTGGGGAGGATTCCCCATGTACACGAATGGGGCATATAGTGCATCCGACCACCTTTTCCCTTTGTTAAAAGGAAAAACTCGGGTATGTCGGGGAAGGTGTTGCGGACAGGCTGATTTAGAGATGATATTGTACACATCAACTTTGCTTTTGTTGATACCTAGATTTTTTATTGGAAGTATTTTTATGCTCTTACTAACATGATCTTACTGCAATCATTCTGGAAGGGCCTTTCACCATTTCCGTCAGCAACGAGGTCAGAGAGCACCTTTGAAGAAGCTTCCAGAACTGGATAGACTACTCAGAGAAGAGTTCCGAAATTTGGATGACTTTAAACATGCCAG</genome_strand>
        <mrna_strand>GATTTGCTAAGCCGCATCCAATACATAAGCAGCGGCTGTTTTCTGGAAATTACCGGAATCATGGCGTTTCTCGGAACAGTGTAGGAACAATATCTGAAAGTCCACCTAGCGATTCAGTTGGGTTTTTCTTTGGTTCTACACCTCTTGACAGTCATGT....................................................................................................................................................................................GTCAAGGCCTTCAAAGTTGAGTGCCTCTCCGCACAGCAATCTTGCAAGTAGTAGTCCGCCTGTGGGTTCCATGCCTAAACCATTTCCACCCTTCCAACATCCAAGTCACAAGCTGCTACAAGAAAATGGTTTTACACAACAGCT...................................................................................................................................................................GTACAAGAAGTATCATAAGCGCTGTCTGAATGATCGCAAGAAACTTGGAGTTGGTTGCAGTGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATGAATACACTGTACAGGTTTTGGTCGTATTTTCTGCGGAACATGTTCATACGTTCTATGTACAATGAATTCCAAAAGATGGCTCAAGAAGATGCAGCTGCTAATTATAACTATGGGATGGAGTGCCTATTTAGATTTTATAG...................................................................................................................................................................................................TTATGGTTTGGAAAAGGAATTTAGAGAGGGCCTTTATGACGACTTTGAGAGATTGACACTTGACACCTACAATAGGGGAAACCTTTACGGGCTTGAGAAGTACTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTTTCAGCATTTTCGTCAGCAACGAGGTCAGAGAGCACCTTTGAAGAAGCTTCCAGAACTGGATAGACTACTCAGAGAAGAGTTCGGAAATTTGGATGACTTCAAACATGCTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E730173" ref_strand="+" ref_description="SGN-E730173 [LA23BB11]">
      <seq>tgatttctcgagcacatttatgcttgatgaagagatggagcttgaaaataaaaaggaccagtcctctttgagtggaagagttgaggaagaagatgacgagatgtacgttaatgacgaggctattgagaaacttgtcattgtaactcggaacactcgggcatctcaggtatctggaactgttggaaaagaatcaaaaccaatatctactgagcttgcttctgcaataaatgatggtctctacttctatgagcaggagcttaaagctacacgatccagtcatagatctaacaactccaataatgatcctagagatgacattagtaggtcttttggtactggtgctgctttatccaaatcaaagtatgccgatcattcttctggaggaaaaaacactgaaggtcctggaagttccaactcccggagaaagcaaaacaaaggatttgctaagccacatccaatacataagcagcggctgttttctggaaattaccggaatcatggggtttctcggaacagtgtaggagcaatatctgaaagtccacctagcgattcagttgggtttttctttggttctacacctcctgacagtcatgtgtctaggccttcaaagttgagtgcctctccgcacagcaatcttgctagtaatagtccgccagttggttccatgcctaaaccatttccacccttccagcatccaagtcacaagctgctacaagaaaatggttttacacagcagctgtacaagaagtatcataagcgctgtctgaactgatcgcaagaaacttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="98272" stop="92649"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97972" g_stop="97895" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97894" i_stop="97074" i_length="821">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97073" g_stop="97004" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="148" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="97003" i_stop="94007" i_length="2997">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="94006" g_stop="93902" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="253" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="93901" i_stop="93825" i_length="77">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="93824" g_stop="93484" g_length="341"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="594" r_length="341" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="93483" i_stop="93304" i_length="180">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="93303" g_stop="93160" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="595" r_stop="738" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="93159" i_stop="92997" i_length="163">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="92996" g_stop="92949" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="739" r_stop="787" r_length="49" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E730173" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>786</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E730173" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97972" e_stop="97895"/>
          <exon e_start="97073" e_stop="97004"/>
          <exon e_start="94006" e_stop="93902"/>
          <exon e_start="93824" e_stop="93484"/>
          <exon e_start="93303" e_stop="93160"/>
          <exon e_start="92996" e_stop="92949"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTTCTCGAGCACATTTATGCTTGATGAAGAGATGGAGCTTGAAAATAAAAAGGACCAGTCCTCTTTGAGTGGAAGGTATAGACGATTTCAGTAACTTTGTTTTGCTTATTTTCTTATCTGAATTTGTTAGAATTTCTCTTGGTTTTTCTTCATAGCTGGCTTGTTTCTACACAAAGATATGCTGAAGACTGGCACTGCTGTTTACATATGTTGCTATTCAGCTTATCTAATGCAATTTGGTCATATGATGCTTCATTTACTTGTACACTGCAAATTTGAACATCTCTTTCCTCCCAGAATCTAACCAATTTGGTTAATATTATAGGTGTCTTGTGTTTGCTAGTAAGGTCAAGGTAAAAAACCTGTTTTATATGCATGTTTAACATTTGCCCCCTCAAAAAATCATATAGCGATACTTATATACTTGATTTGCTTCCATAAATTGAGATTTGGTATGTATTTGAAGGAGACTGGTTATGCCTGTGGGCATATTCAAAAAATATATAGCTTTTGGACCTTGATCTTCTTACTATAGCTGGTAGGAAGTCATCTGCTTGCCCGAAATAGGTTAAAAATTCTTTTCTTTTGTGGTCCCTGTTACAATTCATAGAATCTTTTGTGTAGATAACCAGGTTAGACTCTTCTTTTTTGTTTCTTCTTTTGGATGTAACTACTGTTCTTTCTTAGTGCTAGATTTGATATCAATAATACTTGCCTTCTCTCAAAAAAGAAAAGAATTTATGGTAATTGCTATCAGTGTTACTTGATTCATCTGTTAACTCCACATGGAACAACCAAATCATACTGTGAGGACAGACTTTGTATGATCAAATATCTCTTATTGGTTCAATATTGCTGACTATATTGTTAAATCTTGGTGGTGTTGCTTCATGAAGAGTTGAGGAAGAAGATGACGAGATGTACGTTAATGACGAGGCTATTGAGAAACTTGTCATTGTAACTCGGGTAAGAAAATAGCTTTCCATGTCTTCTATTTGGGTGAATTCAGTTTCCGAAGATATTTTTTTCTTTGAATTTGTTGTCACGTGTTTAGACTTCACTTGTCTTATGTCAAACTTACTCCTTAGGGGTCGTTTGGTTGGGAAAAAGTTATCGTAGGATAGCTATCTTGTGATAACTTATCCATCACTATGATATAAATGGTCAATGGTGGGATAAGTTATTACGAACATGGTAACCAAACAAGATACAAAAATTTTATCCAATCACTATTTTCTTATCCCATCACTATTTATCTGTATCCCTCACACCAAACGATCCCTAAGAGTTTTACTACATGCATTAACAACTGAAGGATAGACTCCTATTTTATGTTACAGGTACAATCAGGTCTTGTATGATCCTGGTGATATTAGTTTCTGGATGCGAAAATATGGGAGATTTAATATTTGATTCTTTTAACCGATGAATTGACATAGAATTTACATTGTATTACTTTCACGACATGCCACAAATCGTATTATATTTTTTCCTTGGTTTATAGTTCTAGTAACAAGTATTTCAATTTTGGGGAAGAATTTACAGACATGTGGGCATTCTTACTGGCAGTCTTTCCCTTTGGGTCCAGCTGATATTCTGATTATGCAATTACAAGAGGATCCTATTCAATACTTTGTGCCAATCTAGTTGTGAAAGAATTTATGGGATTTGAACTATATAGTTCAACCCTTATTTCATTTCCTAATTAATGCCTATGCCTTGTTTTGTACTTTGAAAATGTGGGGCCTCCTGCCTCAGGTGCTTTCCTAATTAATGTGCATGCCTCATTTTGTACATTGACAATCCAGGTCCTCAGGTACTTGACCACATCAGTGGTGTGTTACCACTCCTTAGTTATCCAATAGTTATGCAGTAATTTCTCTTTAGTAACAGTTATTTTCCTGTAATAATGCAGTTATTTTCCTGTAATAGTGCAGTCTTGTAATAGTGCAGTCCTTAATTCCAGTTAAGTTAGTAAGTCATGCCCTAGTTTCTAGGGGTAGTTATTTTACAAGTATTGTATTTAAACTATCTGGTGACTGTGAAAATATAAGCAGAAAAATTATTCAAGTTTTTGAGTACTTCAAACTCAAGAGGTTGTAGGTTCTCTCTCTCTTAACGAACCAGCACCATAGGTCGTACAAAGAAAACATTAGATTTCACACTACAACGCCCCATAACCAGATCCATATCCGGGGACCATAACATAGTGGACATGCATTAACTGCTGTTGAGTGATTATAACTTACTAATTATTAATTAGATAATGTATTTGTCAGTAAGATGCCTGAGATACCTACTTATTCATATTATAAGAAAAATTAATTTTTGTATTGAAAAACAAAAATAAGAGGACTAGGGGTGCCTTGAGCTAAACTGGAAATTCAATTGAAAAAAATAAAATAAATAGGAATTCCTGGTCTCGCTGAAGATCTGCCAGTGGATCGATACCTAGGAAGAGGCTTGCAGCATTACCCCACAAAGTAACAGGAAACTTGCTCAAGCAGACTTGATGTAGCAATAAATTGGTTTTAGGTTGTAGTCCCTTGCACTTTGAGTGCACAGACTATGTAGAATCAATATGAAAAGAAATGTCTTGTTCCCCTTCCGACACACAATCTGATGATTAAGCTCAAGAATGAGAAGGTATTTTCAAGTTATATAGCAATTGATGTTATGTCAATATCGGACCAACATCCTATAAATGCTTTGCTTTTAATGGAATATTTGCATTCCAAATAAATCAGTTAGGAGGAAGTTTTCAAAAGGATGTGAATGGACAGCCACAGGTTCCCGCCTATGCAGAAGTTTGTTTCTATATATGAACCACAAATAACTATTAGAAAAATACACCAAACTTGAAAATAGCTTTTTGTCGTCATTGTTAGTTATTACATAGTGTAAGCTCCAAGGGGGTGGCCAAGCGGTCAAAGATTTGGGTAACAACCTTGGGAGCCAATGTACAATTGCAATTGAGGCTATGCTATATGGGTTCTTAGGTGTTGGTGTGGGTAAAGTTAACCAATACTTGTGCAGGTGGGAGCTAGAATGTACTCGGTAGATTAATCGAGGTGGGCCAAGCTACTTAACCGACACCATTATAAAAATAAAAAGAAGTTACTAAATTGTGTTAGTAATCACAAGCAGTGTTGTCTCGATGCTGCGTCTATAAGCAGACTGTTTTTTTCCCGTTCTTTCTTCTTCGTTGCGTATATTGCTGCGTAGTGCGTATAAATCCCCGTTTTTGTCTTCTCTTATTTCTTCTTCTTCAGCTTTTATTTCTTTGTGTTTTTTTTAGTTTATTAATTTAATAATTGAATTTGCCATGTCACTTTACTTGTTCAATTAAAATTGCCATTAATTTATTTCCTTATTTTAGTCACTAGGCATTAGCTAATTAGGTATTCTATTTTCTCAGTAGGTGATTAGTTAATTTCTCTAAGGCACCAAGCAGTAGCTAATTATCTATGAGCCCTTCTTTTTTGAGTGTACATTTGGAATGGTGTTTAGGATTCCTATGCTTCCGAAGCTGGACTCCTGTAGTCAATATGGGATTTTATTGGGATTTCACTAGATGCATCACTTCATATTTTTGTTTTTAGAAAGGTAATTGTAATTTGCAGCCTTGTTATTGACAGCTGGGGTTGGTTGTGTTCCTTACAAGTCTTTCATCTGCCAGCCTTTAACTTGCATGACTAGGATAGTTTGTCCCATCAATCAATAAGTTCCAAAATCAGTTGCCCTATAGACAAAAGTTTTGGCCAAATTCATGGAAAAGCTAAGATATTGCAGCTGATGCAGCTTTGAAGAAGCATGTGGAAAAATGAGCTGTTGTGCTTAAACAGCCTTTTTTTTTCATATCCAAAAATAACCACGACTTCTATTGCCTCTATTATTTCTGCTACACTATGGGCTTTGATTGTTAATTAGGCTAATTACCTCATCTGTGTGGATTTTCTACAGAACACTCGGGCATCTCAGGTATCTGGAACTGTTGGAAAAGAATCAAAACCAATATCTACTGAGCTTGCTTCTGCAATAAATGATGGTCTCTACTTCTATGAGCAGGTTGGTGGTTGCTTTAATAAGGTCATTCTTTCCCTATTCAACTTAATACAGTATTATATTGATCTCTCATCTTCCAGGAGCTTAAAGCTACACGATCCAGTCATAGATCTAACAACTCCAATAATGATCCTAGAGATGACATTAGTAGGTCTTTTGGTACTGGTGCTGCTTTATCCAAATCAAAGTATGCCGATCATTCTTCTGGAGGAAAAAACACTGAAGGTCCTGGAAGTTCCAACTCCCGGAGAAAGCAAAACAAAGGATTTGCTAAGCCACATCCAATACATAAGCAGCGGCTGTTTTCTGGAAATTACCGGAATCATGGGGTTTCTCGGAACAGTGTAGGAGCAATATCTGAAAGTCCACCTAGCGATTCAGTTGGGTTTTTCTTTGGTTCTACACCTCCTGACAGTCATGTGTATGTTCTGGATCCCTGGTGTTGTTCTAATGTAGTTGTGTATTGTAATATGTTTGAGATTATTTAATTATTTTGTCAAAGAGCAAATGCAAGTCTATGAATATATGATTATTAGGGACATTGTGAAAACAGTTCTGGGTTGTTACACAATAACTTAGTTACCTGAACTTCTGTTTACAGGTCTAGGCCTTCAAAGTTGAGTGCCTCTCCGCACAGCAATCTTGCTAGTAATAGTCCGCCAGTTGGTTCCATGCCTAAACCATTTCCACCCTTCCAGCATCCAAGTCACAAGCTGCTACAAGAAAATGGTTTTACACAGCAGCTGTGAGTAGATTTACTTTCAATAGGAGTTGGTGTTCTATGCATTTTGTATTCAAGTGCATGCATCTGTTCATGCGCGGGTCTGCATGTGCACTGACTTATACATATATTCCTTGTGCATCTCTTTTCGCTCCTGAACGTTGGTTTTGGATTTTCCATCTTTTAGGTACAAGAAGTATCATAAGCGCTGTCTG-ACTGATCGCAAGAAACTTGG</genome_strand>
        <mrna_strand>TGATTTCTCGAGCACATTTATGCTTGATGAAGAGATGGAGCTTGAAAATAAAAAGGACCAGTCCTCTTTGAGTGGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGAGGAAGAAGATGACGAGATGTACGTTAATGACGAGGCTATTGAGAAACTTGTCATTGTAACTCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACTCGGGCATCTCAGGTATCTGGAACTGTTGGAAAAGAATCAAAACCAATATCTACTGAGCTTGCTTCTGCAATAAATGATGGTCTCTACTTCTATGAGCAG.............................................................................GAGCTTAAAGCTACACGATCCAGTCATAGATCTAACAACTCCAATAATGATCCTAGAGATGACATTAGTAGGTCTTTTGGTACTGGTGCTGCTTTATCCAAATCAAAGTATGCCGATCATTCTTCTGGAGGAAAAAACACTGAAGGTCCTGGAAGTTCCAACTCCCGGAGAAAGCAAAACAAAGGATTTGCTAAGCCACATCCAATACATAAGCAGCGGCTGTTTTCTGGAAATTACCGGAATCATGGGGTTTCTCGGAACAGTGTAGGAGCAATATCTGAAAGTCCACCTAGCGATTCAGTTGGGTTTTTCTTTGGTTCTACACCTCCTGACAGTCATGT....................................................................................................................................................................................GTCTAGGCCTTCAAAGTTGAGTGCCTCTCCGCACAGCAATCTTGCTAGTAATAGTCCGCCAGTTGGTTCCATGCCTAAACCATTTCCACCCTTCCAGCATCCAAGTCACAAGCTGCTACAAGAAAATGGTTTTACACAGCAGCT...................................................................................................................................................................GTACAAGAAGTATCATAAGCGCTGTCTGAACTGATCGCAAGAAACTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E558459" ref_strand="+" ref_description="SGN-E558459 [17803]">
      <seq>aagatgatgagatgtacgttaatgatgaggctattgagaaacttgtcattgtaactcggaacactcgggcatctcaggtatctggaactgttggaaaagaatcaaaaccaatatctactgagcttgcttctgcaataaatgataggtctctacttctacgagcaggagcttaaagctacacgatccagtcatagatctaacaactacaataatgatcctagagatgacattactaggtcttctggtactggtgctgctttatcaaaatcaaagtatgccgatcattcttctggaggaaaaaacactgaaggtcctggaagttctaactctcggagaaagcaaaacaaaggatttgctaagccgcatccaatacataagcagcggctgttttctggaaattaccggaatcatggcgtttctcggaacagtgtaggaacaatatctgaaagtccacctagcgattcagttgggtttttctttggttctacacctcctgacagtcatgtgtcaaggccttcaaagttgagtgcctctccggacagcaatcttgcaagtagtagtccgcctgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="97362" stop="92941"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97062" g_stop="97004" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97003" i_stop="94007" i_length="2997">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94006" g_stop="93902" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="165" r_length="106" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93901" i_stop="93825" i_length="77">
            <donor d_prob="0.996" d_score="0.94"/>
            <acceptor a_prob="0.982" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="93824" g_stop="93484" g_length="341"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="506" r_length="341" r_score="0.974"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="93483" i_stop="93304" i_length="180">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="93303" g_stop="93240" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="570" r_length="64" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E558459" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E558459" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97062" e_stop="97004"/>
          <exon e_start="94006" e_stop="93902"/>
          <exon e_start="93824" e_stop="93484"/>
          <exon e_start="93303" e_stop="93240"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATGACGAGATGTACGTTAATGACGAGGCTATTGAGAAACTTGTCATTGTAACTCGGGTAAGAAAATAGCTTTCCATGTCTTCTATTTGGGTGAATTCAGTTTCCGAAGATATTTTTTTCTTTGAATTTGTTGTCACGTGTTTAGACTTCACTTGTCTTATGTCAAACTTACTCCTTAGGGGTCGTTTGGTTGGGAAAAAGTTATCGTAGGATAGCTATCTTGTGATAACTTATCCATCACTATGATATAAATGGTCAATGGTGGGATAAGTTATTACGAACATGGTAACCAAACAAGATACAAAAATTTTATCCAATCACTATTTTCTTATCCCATCACTATTTATCTGTATCCCTCACACCAAACGATCCCTAAGAGTTTTACTACATGCATTAACAACTGAAGGATAGACTCCTATTTTATGTTACAGGTACAATCAGGTCTTGTATGATCCTGGTGATATTAGTTTCTGGATGCGAAAATATGGGAGATTTAATATTTGATTCTTTTAACCGATGAATTGACATAGAATTTACATTGTATTACTTTCACGACATGCCACAAATCGTATTATATTTTTTCCTTGGTTTATAGTTCTAGTAACAAGTATTTCAATTTTGGGGAAGAATTTACAGACATGTGGGCATTCTTACTGGCAGTCTTTCCCTTTGGGTCCAGCTGATATTCTGATTATGCAATTACAAGAGGATCCTATTCAATACTTTGTGCCAATCTAGTTGTGAAAGAATTTATGGGATTTGAACTATATAGTTCAACCCTTATTTCATTTCCTAATTAATGCCTATGCCTTGTTTTGTACTTTGAAAATGTGGGGCCTCCTGCCTCAGGTGCTTTCCTAATTAATGTGCATGCCTCATTTTGTACATTGACAATCCAGGTCCTCAGGTACTTGACCACATCAGTGGTGTGTTACCACTCCTTAGTTATCCAATAGTTATGCAGTAATTTCTCTTTAGTAACAGTTATTTTCCTGTAATAATGCAGTTATTTTCCTGTAATAGTGCAGTCTTGTAATAGTGCAGTCCTTAATTCCAGTTAAGTTAGTAAGTCATGCCCTAGTTTCTAGGGGTAGTTATTTTACAAGTATTGTATTTAAACTATCTGGTGACTGTGAAAATATAAGCAGAAAAATTATTCAAGTTTTTGAGTACTTCAAACTCAAGAGGTTGTAGGTTCTCTCTCTCTTAACGAACCAGCACCATAGGTCGTACAAAGAAAACATTAGATTTCACACTACAACGCCCCATAACCAGATCCATATCCGGGGACCATAACATAGTGGACATGCATTAACTGCTGTTGAGTGATTATAACTTACTAATTATTAATTAGATAATGTATTTGTCAGTAAGATGCCTGAGATACCTACTTATTCATATTATAAGAAAAATTAATTTTTGTATTGAAAAACAAAAATAAGAGGACTAGGGGTGCCTTGAGCTAAACTGGAAATTCAATTGAAAAAAATAAAATAAATAGGAATTCCTGGTCTCGCTGAAGATCTGCCAGTGGATCGATACCTAGGAAGAGGCTTGCAGCATTACCCCACAAAGTAACAGGAAACTTGCTCAAGCAGACTTGATGTAGCAATAAATTGGTTTTAGGTTGTAGTCCCTTGCACTTTGAGTGCACAGACTATGTAGAATCAATATGAAAAGAAATGTCTTGTTCCCCTTCCGACACACAATCTGATGATTAAGCTCAAGAATGAGAAGGTATTTTCAAGTTATATAGCAATTGATGTTATGTCAATATCGGACCAACATCCTATAAATGCTTTGCTTTTAATGGAATATTTGCATTCCAAATAAATCAGTTAGGAGGAAGTTTTCAAAAGGATGTGAATGGACAGCCACAGGTTCCCGCCTATGCAGAAGTTTGTTTCTATATATGAACCACAAATAACTATTAGAAAAATACACCAAACTTGAAAATAGCTTTTTGTCGTCATTGTTAGTTATTACATAGTGTAAGCTCCAAGGGGGTGGCCAAGCGGTCAAAGATTTGGGTAACAACCTTGGGAGCCAATGTACAATTGCAATTGAGGCTATGCTATATGGGTTCTTAGGTGTTGGTGTGGGTAAAGTTAACCAATACTTGTGCAGGTGGGAGCTAGAATGTACTCGGTAGATTAATCGAGGTGGGCCAAGCTACTTAACCGACACCATTATAAAAATAAAAAGAAGTTACTAAATTGTGTTAGTAATCACAAGCAGTGTTGTCTCGATGCTGCGTCTATAAGCAGACTGTTTTTTTCCCGTTCTTTCTTCTTCGTTGCGTATATTGCTGCGTAGTGCGTATAAATCCCCGTTTTTGTCTTCTCTTATTTCTTCTTCTTCAGCTTTTATTTCTTTGTGTTTTTTTTAGTTTATTAATTTAATAATTGAATTTGCCATGTCACTTTACTTGTTCAATTAAAATTGCCATTAATTTATTTCCTTATTTTAGTCACTAGGCATTAGCTAATTAGGTATTCTATTTTCTCAGTAGGTGATTAGTTAATTTCTCTAAGGCACCAAGCAGTAGCTAATTATCTATGAGCCCTTCTTTTTTGAGTGTACATTTGGAATGGTGTTTAGGATTCCTATGCTTCCGAAGCTGGACTCCTGTAGTCAATATGGGATTTTATTGGGATTTCACTAGATGCATCACTTCATATTTTTGTTTTTAGAAAGGTAATTGTAATTTGCAGCCTTGTTATTGACAGCTGGGGTTGGTTGTGTTCCTTACAAGTCTTTCATCTGCCAGCCTTTAACTTGCATGACTAGGATAGTTTGTCCCATCAATCAATAAGTTCCAAAATCAGTTGCCCTATAGACAAAAGTTTTGGCCAAATTCATGGAAAAGCTAAGATATTGCAGCTGATGCAGCTTTGAAGAAGCATGTGGAAAAATGAGCTGTTGTGCTTAAACAGCCTTTTTTTTTCATATCCAAAAATAACCACGACTTCTATTGCCTCTATTATTTCTGCTACACTATGGGCTTTGATTGTTAATTAGGCTAATTACCTCATCTGTGTGGATTTTCTACAGAACACTCGGGCATCTCAGGTATCTGGAACTGTTGGAAAAGAATCAAAACCAATATCTACTGAGCTTGCTTCTGCAATAAATGAT-GGTCTCTACTTCTATGAGCAGGTTGGTGGTTGCTTTAATAAGGTCATTCTTTCCCTATTCAACTTAATACAGTATTATATTGATCTCTCATCTTCCAGGAGCTTAAAGCTACACGATCCAGTCATAGATCTAACAACTCCAATAATGATCCTAGAGATGACATTAGTAGGTCTTTTGGTACTGGTGCTGCTTTATCCAAATCAAAGTATGCCGATCATTCTTCTGGAGGAAAAAACACTGAAGGTCCTGGAAGTTCCAACTCCCGGAGAAAGCAAAACAAAGGATTTGCTAAGCCACATCCAATACATAAGCAGCGGCTGTTTTCTGGAAATTACCGGAATCATGGGGTTTCTCGGAACAGTGTAGGAGCAATATCTGAAAGTCCACCTAGCGATTCAGTTGGGTTTTTCTTTGGTTCTACACCTCCTGACAGTCATGTGTATGTTCTGGATCCCTGGTGTTGTTCTAATGTAGTTGTGTATTGTAATATGTTTGAGATTATTTAATTATTTTGTCAAAGAGCAAATGCAAGTCTATGAATATATGATTATTAGGGACATTGTGAAAACAGTTCTGGGTTGTTACACAATAACTTAGTTACCTGAACTTCTGTTTACAGGTCTAGGCCTTCAAAGTTGAGTGCCTCTCCGCACAGCAATCTTGCTAGTAATAGTCCGCCAGTT</genome_strand>
        <mrna_strand>AAGATGATGAGATGTACGTTAATGATGAGGCTATTGAGAAACTTGTCATTGTAACTCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACTCGGGCATCTCAGGTATCTGGAACTGTTGGAAAAGAATCAAAACCAATATCTACTGAGCTTGCTTCTGCAATAAATGATAGGTCTCTACTTCTACGAGCAG.............................................................................GAGCTTAAAGCTACACGATCCAGTCATAGATCTAACAACTACAATAATGATCCTAGAGATGACATTACTAGGTCTTCTGGTACTGGTGCTGCTTTATCAAAATCAAAGTATGCCGATCATTCTTCTGGAGGAAAAAACACTGAAGGTCCTGGAAGTTCTAACTCTCGGAGAAAGCAAAACAAAGGATTTGCTAAGCCGCATCCAATACATAAGCAGCGGCTGTTTTCTGGAAATTACCGGAATCATGGCGTTTCTCGGAACAGTGTAGGAACAATATCTGAAAGTCCACCTAGCGATTCAGTTGGGTTTTTCTTTGGTTCTACACCTCCTGACAGTCATGT....................................................................................................................................................................................GTCAAGGCCTTCAAAGTTGAGTGCCTCTCCGGACAGCAATCTTGCAAGTAGTAGTCCGCCTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E698627" ref_strand="+" ref_description="SGN-E698627 [FA07AC12]">
      <seq>ataaagaaggatcgaggtcaatgaaaataaagaggatggatttcaagtcagattttcccaagaaaatcgtgtaggtgagcttgcatcattagagaaacatgctaaaaaagtgtcagtgtttagtaaagcagaaaccagtaggaagaaatctggattccgtggtccaactcacagagttgacaaaggaagtggtgatgcaagaatggttatggcatcaaatgttgtagaagagaatgtagacgacttatctaatgatttctcgagcacatttatgcttgatgaagagatggagcttgaaaataaaaaggaccagtcctctttgagtggaagagttgaggaacaagatgacgagatgtacgttaatgacgaggctattgagaaacttgtcattgtaactcggaacactcgggcatctcaggtatctggaactgttggaaaagaatcaaaaccaatatctactgagcttgcttctgcaataaatgatggtctctacttctatgagcaggagcttaaagctacacgatccagtcatagatctaacaactccaataatgatcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="98523" stop="93471"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98223" g_stop="97895" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="330" r_length="330" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97894" i_stop="97074" i_length="821">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97073" g_stop="97004" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="400" r_length="70" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="97003" i_stop="94007" i_length="2997">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="94006" g_stop="93902" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="505" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="93901" i_stop="93825" i_length="77">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="93824" g_stop="93771" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="559" r_length="54" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E698627" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E698627" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98223" e_stop="97895"/>
          <exon e_start="97073" e_stop="97004"/>
          <exon e_start="94006" e_stop="93902"/>
          <exon e_start="93824" e_stop="93771"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAAAGAAGGAT-GAGGTCAATGAAAATAAAGAGGATGGATTTCAAGTCAGATTTTCCCAAGAAAATCGTGTAGGTGAGCTTGCATCATTAGAGAAACATGCTAAAAAAGTGTCAGTGTTTAGTAAAGCAGAAACCAGTAGGAAGAAATCTGGATTCCGTGGTCCAACTCACAGAGTTGACAAAGGAAGTGGTGATGCAAGAATGGTTATGGCATCAAATGTTGTAGAAGAGAATGTAGACGACTTATCTAATGATTTCTCGAGCACATTTATGCTTGATGAAGAGATGGAGCTTGAAAATAAAAAGGACCAGTCCTCTTTGAGTGGAAGGTATAGACGATTTCAGTAACTTTGTTTTGCTTATTTTCTTATCTGAATTTGTTAGAATTTCTCTTGGTTTTTCTTCATAGCTGGCTTGTTTCTACACAAAGATATGCTGAAGACTGGCACTGCTGTTTACATATGTTGCTATTCAGCTTATCTAATGCAATTTGGTCATATGATGCTTCATTTACTTGTACACTGCAAATTTGAACATCTCTTTCCTCCCAGAATCTAACCAATTTGGTTAATATTATAGGTGTCTTGTGTTTGCTAGTAAGGTCAAGGTAAAAAACCTGTTTTATATGCATGTTTAACATTTGCCCCCTCAAAAAATCATATAGCGATACTTATATACTTGATTTGCTTCCATAAATTGAGATTTGGTATGTATTTGAAGGAGACTGGTTATGCCTGTGGGCATATTCAAAAAATATATAGCTTTTGGACCTTGATCTTCTTACTATAGCTGGTAGGAAGTCATCTGCTTGCCCGAAATAGGTTAAAAATTCTTTTCTTTTGTGGTCCCTGTTACAATTCATAGAATCTTTTGTGTAGATAACCAGGTTAGACTCTTCTTTTTTGTTTCTTCTTTTGGATGTAACTACTGTTCTTTCTTAGTGCTAGATTTGATATCAATAATACTTGCCTTCTCTCAAAAAAGAAAAGAATTTATGGTAATTGCTATCAGTGTTACTTGATTCATCTGTTAACTCCACATGGAACAACCAAATCATACTGTGAGGACAGACTTTGTATGATCAAATATCTCTTATTGGTTCAATATTGCTGACTATATTGTTAAATCTTGGTGGTGTTGCTTCATGAAGAGTTGAGGAAGAAGATGACGAGATGTACGTTAATGACGAGGCTATTGAGAAACTTGTCATTGTAACTCGGGTAAGAAAATAGCTTTCCATGTCTTCTATTTGGGTGAATTCAGTTTCCGAAGATATTTTTTTCTTTGAATTTGTTGTCACGTGTTTAGACTTCACTTGTCTTATGTCAAACTTACTCCTTAGGGGTCGTTTGGTTGGGAAAAAGTTATCGTAGGATAGCTATCTTGTGATAACTTATCCATCACTATGATATAAATGGTCAATGGTGGGATAAGTTATTACGAACATGGTAACCAAACAAGATACAAAAATTTTATCCAATCACTATTTTCTTATCCCATCACTATTTATCTGTATCCCTCACACCAAACGATCCCTAAGAGTTTTACTACATGCATTAACAACTGAAGGATAGACTCCTATTTTATGTTACAGGTACAATCAGGTCTTGTATGATCCTGGTGATATTAGTTTCTGGATGCGAAAATATGGGAGATTTAATATTTGATTCTTTTAACCGATGAATTGACATAGAATTTACATTGTATTACTTTCACGACATGCCACAAATCGTATTATATTTTTTCCTTGGTTTATAGTTCTAGTAACAAGTATTTCAATTTTGGGGAAGAATTTACAGACATGTGGGCATTCTTACTGGCAGTCTTTCCCTTTGGGTCCAGCTGATATTCTGATTATGCAATTACAAGAGGATCCTATTCAATACTTTGTGCCAATCTAGTTGTGAAAGAATTTATGGGATTTGAACTATATAGTTCAACCCTTATTTCATTTCCTAATTAATGCCTATGCCTTGTTTTGTACTTTGAAAATGTGGGGCCTCCTGCCTCAGGTGCTTTCCTAATTAATGTGCATGCCTCATTTTGTACATTGACAATCCAGGTCCTCAGGTACTTGACCACATCAGTGGTGTGTTACCACTCCTTAGTTATCCAATAGTTATGCAGTAATTTCTCTTTAGTAACAGTTATTTTCCTGTAATAATGCAGTTATTTTCCTGTAATAGTGCAGTCTTGTAATAGTGCAGTCCTTAATTCCAGTTAAGTTAGTAAGTCATGCCCTAGTTTCTAGGGGTAGTTATTTTACAAGTATTGTATTTAAACTATCTGGTGACTGTGAAAATATAAGCAGAAAAATTATTCAAGTTTTTGAGTACTTCAAACTCAAGAGGTTGTAGGTTCTCTCTCTCTTAACGAACCAGCACCATAGGTCGTACAAAGAAAACATTAGATTTCACACTACAACGCCCCATAACCAGATCCATATCCGGGGACCATAACATAGTGGACATGCATTAACTGCTGTTGAGTGATTATAACTTACTAATTATTAATTAGATAATGTATTTGTCAGTAAGATGCCTGAGATACCTACTTATTCATATTATAAGAAAAATTAATTTTTGTATTGAAAAACAAAAATAAGAGGACTAGGGGTGCCTTGAGCTAAACTGGAAATTCAATTGAAAAAAATAAAATAAATAGGAATTCCTGGTCTCGCTGAAGATCTGCCAGTGGATCGATACCTAGGAAGAGGCTTGCAGCATTACCCCACAAAGTAACAGGAAACTTGCTCAAGCAGACTTGATGTAGCAATAAATTGGTTTTAGGTTGTAGTCCCTTGCACTTTGAGTGCACAGACTATGTAGAATCAATATGAAAAGAAATGTCTTGTTCCCCTTCCGACACACAATCTGATGATTAAGCTCAAGAATGAGAAGGTATTTTCAAGTTATATAGCAATTGATGTTATGTCAATATCGGACCAACATCCTATAAATGCTTTGCTTTTAATGGAATATTTGCATTCCAAATAAATCAGTTAGGAGGAAGTTTTCAAAAGGATGTGAATGGACAGCCACAGGTTCCCGCCTATGCAGAAGTTTGTTTCTATATATGAACCACAAATAACTATTAGAAAAATACACCAAACTTGAAAATAGCTTTTTGTCGTCATTGTTAGTTATTACATAGTGTAAGCTCCAAGGGGGTGGCCAAGCGGTCAAAGATTTGGGTAACAACCTTGGGAGCCAATGTACAATTGCAATTGAGGCTATGCTATATGGGTTCTTAGGTGTTGGTGTGGGTAAAGTTAACCAATACTTGTGCAGGTGGGAGCTAGAATGTACTCGGTAGATTAATCGAGGTGGGCCAAGCTACTTAACCGACACCATTATAAAAATAAAAAGAAGTTACTAAATTGTGTTAGTAATCACAAGCAGTGTTGTCTCGATGCTGCGTCTATAAGCAGACTGTTTTTTTCCCGTTCTTTCTTCTTCGTTGCGTATATTGCTGCGTAGTGCGTATAAATCCCCGTTTTTGTCTTCTCTTATTTCTTCTTCTTCAGCTTTTATTTCTTTGTGTTTTTTTTAGTTTATTAATTTAATAATTGAATTTGCCATGTCACTTTACTTGTTCAATTAAAATTGCCATTAATTTATTTCCTTATTTTAGTCACTAGGCATTAGCTAATTAGGTATTCTATTTTCTCAGTAGGTGATTAGTTAATTTCTCTAAGGCACCAAGCAGTAGCTAATTATCTATGAGCCCTTCTTTTTTGAGTGTACATTTGGAATGGTGTTTAGGATTCCTATGCTTCCGAAGCTGGACTCCTGTAGTCAATATGGGATTTTATTGGGATTTCACTAGATGCATCACTTCATATTTTTGTTTTTAGAAAGGTAATTGTAATTTGCAGCCTTGTTATTGACAGCTGGGGTTGGTTGTGTTCCTTACAAGTCTTTCATCTGCCAGCCTTTAACTTGCATGACTAGGATAGTTTGTCCCATCAATCAATAAGTTCCAAAATCAGTTGCCCTATAGACAAAAGTTTTGGCCAAATTCATGGAAAAGCTAAGATATTGCAGCTGATGCAGCTTTGAAGAAGCATGTGGAAAAATGAGCTGTTGTGCTTAAACAGCCTTTTTTTTTCATATCCAAAAATAACCACGACTTCTATTGCCTCTATTATTTCTGCTACACTATGGGCTTTGATTGTTAATTAGGCTAATTACCTCATCTGTGTGGATTTTCTACAGAACACTCGGGCATCTCAGGTATCTGGAACTGTTGGAAAAGAATCAAAACCAATATCTACTGAGCTTGCTTCTGCAATAAATGATGGTCTCTACTTCTATGAGCAGGTTGGTGGTTGCTTTAATAAGGTCATTCTTTCCCTATTCAACTTAATACAGTATTATATTGATCTCTCATCTTCCAGGAGCTTAAAGCTACACGATCCAGTCATAGATCTAACAACTCCAATAATGATCCT</genome_strand>
        <mrna_strand>ATAAAGAAGGATCGAGGTCAATGAAAATAAAGAGGATGGATTTCAAGTCAGATTTTCCCAAGAAAATCGTGTAGGTGAGCTTGCATCATTAGAGAAACATGCTAAAAAAGTGTCAGTGTTTAGTAAAGCAGAAACCAGTAGGAAGAAATCTGGATTCCGTGGTCCAACTCACAGAGTTGACAAAGGAAGTGGTGATGCAAGAATGGTTATGGCATCAAATGTTGTAGAAGAGAATGTAGACGACTTATCTAATGATTTCTCGAGCACATTTATGCTTGATGAAGAGATGGAGCTTGAAAATAAAAAGGACCAGTCCTCTTTGAGTGGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGAGGAACAAGATGACGAGATGTACGTTAATGACGAGGCTATTGAGAAACTTGTCATTGTAACTCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACTCGGGCATCTCAGGTATCTGGAACTGTTGGAAAAGAATCAAAACCAATATCTACTGAGCTTGCTTCTGCAATAAATGATGGTCTCTACTTCTATGAGCAG.............................................................................GAGCTTAAAGCTACACGATCCAGTCATAGATCTAACAACTCCAATAATGATCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E584679" ref_strand="+" ref_description="SGN-E584679 [10506]">
      <seq>tgcagaatgaccactacttgctttccttaatggacgatcaaggttgggttccaatctctattatcgccgacttcaaaagggttaaaaaaatgagtacagatatagcatttatcattgatgcattgcaggcttcaagcactgttgaagtaaagggagacaagttgagaagacgtgatgaatggtcaaagtgggtttcagctagtgctgatcagaaatcatccccttcgattccggtggaacactcaattgggaaggttataaagaatgatgaggtcaatgaaaataaggaggatggaattcaaggcagattttcccaagaaaatcatgtaggtgagcttgcatcaatagagaaacatgctaaaaaagtatcagtgtttagtaaagcagaaaccagtaggaagaaatctggtttccatggttcaactcacagagttgacaaaggaagtggtgatgcaagaatggttatggcatcagatgttgtagaacagaatgtagatgacttatctaatgatttctcgagcacattcatgcttgatgaagagatggagcttgaaaataaaaaggaccagtcctctttgagtggaagagttgatgaagaagatgatgagatgtacgttgaatgatgaggctattgagaaacttgtcattgtaactcggaacactcgggcatctcaggtatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="99612" stop="93682"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99312" g_stop="99233" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="0.913"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99232" i_stop="98972" i_length="261">
            <donor d_prob="0.980" d_score="0.94"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98971" g_stop="98900" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="152" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98899" i_stop="98329" i_length="571">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98328" g_stop="97895" g_length="434"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="586" r_length="434" r_score="0.956"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="97894" i_stop="97074" i_length="821">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="97073" g_stop="97004" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="587" r_stop="657" r_length="71" r_score="0.929"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="97003" i_stop="94007" i_length="2997">
            <donor d_prob="0.992" d_score="0.94"/>
            <acceptor a_prob="0.985" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="94006" g_stop="93982" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="658" r_stop="682" r_length="25" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E584679" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E584679" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99312" e_stop="99233"/>
          <exon e_start="98971" e_stop="98900"/>
          <exon e_start="98328" e_stop="97895"/>
          <exon e_start="97073" e_stop="97004"/>
          <exon e_start="94006" e_stop="93982"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAGAATGATCGCTTCTTGCTTACCTTAATGGACGATCAAGGTTGGGTTCCAATCTCTAGTATCGCTGAGTTCAAAAGGGTATAATCTCAAAACTTCTCAGAAACAGTCTCATTTATGCTAGAGTTTCTGATAGGATGCAGTGTTTTTTTTCAAAAAAATATTGAAGTCCGTTAGTTTTTCTTTTTTGAGACTGAATCCGTTAGTTTTTCATGTGTCAAACTTGGATTTGGTCCATTCCATTCTCGTCTTTTACATTGTCTGACACATTTAAGCATTTATCCTTTCTGTGAAATGAAATAGCTCTGATTGCAGATATTCTTTTTCCCACTTCTGCTTCAGGTTAAAAAAATGAGTACAGATATAGCATTTATCATTGATGCATTGCAGGCTTCAAGCACTGTTGAAGTAAAGGTAAAATGCTTTCCCTTTGCTTGAGTAGCCCATTGTCTCTTTCCTTTCCTTTTGGCATGAAAAAAAGTAAATTTCCCAACTAATTTTTACATATATGTTCCAATTTTCTTTTACTAAGCTGTTTGTATTGTATCCTAAACATCTTTTAATTGCTTCCAAAATGGTCCCTTGGTGTACTGTTGGGCAGACTAAGACCTCCACGTAAGGTAAAAATGAAGTAAAGAAATTCAGACAGGATAAGTAAAGAAGAAAATAAACAAAAAGTATAGCAAAGACGAAACAAAAGAAACAGAAAGGTAAAGTTCAACTTGTAGGTTTCCCTGCTTGGTTTTCCTTCTTATTTGCTGCTCCGGATTCTCCCTTCCTGGTCTTTCCTTTCCTACTGACTTCACGCCATCATAACAAATTTGCAACTTGGGTAAATATATCGAGACTAATTTTGCAATTTGCTAGTAGAGAGAGTTTTGGAGTTAGCCTATCAGTAGATTTATGTTTTTCTTTGCCTTCTACATTAAATACTTCTGTCCCTTTGTCCTTATTTATAAATGTGTTGTTTGCTTAATTTCTGCAGGGAGACAAGTTGAGAAGACGTGATGAATGGTCAAAGTGGGTTTCAGCTAGTGCTGATCAGAAATCATCCCCTTTGACCCCGGTGGAACACTCAGTGGGGAAGGTTATAAAGAAGGATGAGGTCAATGAAAATAAAGAGGATGGATTTCAAGTCAGATTTTCCCAAGAAAATCGTGTAGGTGAGCTTGCATCATTAGAGAAACATGCTAAAAAAGTGTCAGTGTTTAGTAAAGCAGAAACCAGTAGGAAGAAATCTGGATTCCGTGGTCCAACTCACAGAGTTGACAAAGGAAGTGGTGATGCAAGAATGGTTATGGCATCAAATGTTGTAGAAGAGAATGTAGACGACTTATCTAATGATTTCTCGAGCACATTTATGCTTGATGAAGAGATGGAGCTTGAAAATAAAAAGGACCAGTCCTCTTTGAGTGGAAGGTATAGACGATTTCAGTAACTTTGTTTTGCTTATTTTCTTATCTGAATTTGTTAGAATTTCTCTTGGTTTTTCTTCATAGCTGGCTTGTTTCTACACAAAGATATGCTGAAGACTGGCACTGCTGTTTACATATGTTGCTATTCAGCTTATCTAATGCAATTTGGTCATATGATGCTTCATTTACTTGTACACTGCAAATTTGAACATCTCTTTCCTCCCAGAATCTAACCAATTTGGTTAATATTATAGGTGTCTTGTGTTTGCTAGTAAGGTCAAGGTAAAAAACCTGTTTTATATGCATGTTTAACATTTGCCCCCTCAAAAAATCATATAGCGATACTTATATACTTGATTTGCTTCCATAAATTGAGATTTGGTATGTATTTGAAGGAGACTGGTTATGCCTGTGGGCATATTCAAAAAATATATAGCTTTTGGACCTTGATCTTCTTACTATAGCTGGTAGGAAGTCATCTGCTTGCCCGAAATAGGTTAAAAATTCTTTTCTTTTGTGGTCCCTGTTACAATTCATAGAATCTTTTGTGTAGATAACCAGGTTAGACTCTTCTTTTTTGTTTCTTCTTTTGGATGTAACTACTGTTCTTTCTTAGTGCTAGATTTGATATCAATAATACTTGCCTTCTCTCAAAAAAGAAAAGAATTTATGGTAATTGCTATCAGTGTTACTTGATTCATCTGTTAACTCCACATGGAACAACCAAATCATACTGTGAGGACAGACTTTGTATGATCAAATATCTCTTATTGGTTCAATATTGCTGACTATATTGTTAAATCTTGGTGGTGTTGCTTCATGAAGAGTTGAGGAAGAAGATGACGAGATGTACGTT-AATGACGAGGCTATTGAGAAACTTGTCATTGTAACTCGGGTAAGAAAATAGCTTTCCATGTCTTCTATTTGGGTGAATTCAGTTTCCGAAGATATTTTTTTCTTTGAATTTGTTGTCACGTGTTTAGACTTCACTTGTCTTATGTCAAACTTACTCCTTAGGGGTCGTTTGGTTGGGAAAAAGTTATCGTAGGATAGCTATCTTGTGATAACTTATCCATCACTATGATATAAATGGTCAATGGTGGGATAAGTTATTACGAACATGGTAACCAAACAAGATACAAAAATTTTATCCAATCACTATTTTCTTATCCCATCACTATTTATCTGTATCCCTCACACCAAACGATCCCTAAGAGTTTTACTACATGCATTAACAACTGAAGGATAGACTCCTATTTTATGTTACAGGTACAATCAGGTCTTGTATGATCCTGGTGATATTAGTTTCTGGATGCGAAAATATGGGAGATTTAATATTTGATTCTTTTAACCGATGAATTGACATAGAATTTACATTGTATTACTTTCACGACATGCCACAAATCGTATTATATTTTTTCCTTGGTTTATAGTTCTAGTAACAAGTATTTCAATTTTGGGGAAGAATTTACAGACATGTGGGCATTCTTACTGGCAGTCTTTCCCTTTGGGTCCAGCTGATATTCTGATTATGCAATTACAAGAGGATCCTATTCAATACTTTGTGCCAATCTAGTTGTGAAAGAATTTATGGGATTTGAACTATATAGTTCAACCCTTATTTCATTTCCTAATTAATGCCTATGCCTTGTTTTGTACTTTGAAAATGTGGGGCCTCCTGCCTCAGGTGCTTTCCTAATTAATGTGCATGCCTCATTTTGTACATTGACAATCCAGGTCCTCAGGTACTTGACCACATCAGTGGTGTGTTACCACTCCTTAGTTATCCAATAGTTATGCAGTAATTTCTCTTTAGTAACAGTTATTTTCCTGTAATAATGCAGTTATTTTCCTGTAATAGTGCAGTCTTGTAATAGTGCAGTCCTTAATTCCAGTTAAGTTAGTAAGTCATGCCCTAGTTTCTAGGGGTAGTTATTTTACAAGTATTGTATTTAAACTATCTGGTGACTGTGAAAATATAAGCAGAAAAATTATTCAAGTTTTTGAGTACTTCAAACTCAAGAGGTTGTAGGTTCTCTCTCTCTTAACGAACCAGCACCATAGGTCGTACAAAGAAAACATTAGATTTCACACTACAACGCCCCATAACCAGATCCATATCCGGGGACCATAACATAGTGGACATGCATTAACTGCTGTTGAGTGATTATAACTTACTAATTATTAATTAGATAATGTATTTGTCAGTAAGATGCCTGAGATACCTACTTATTCATATTATAAGAAAAATTAATTTTTGTATTGAAAAACAAAAATAAGAGGACTAGGGGTGCCTTGAGCTAAACTGGAAATTCAATTGAAAAAAATAAAATAAATAGGAATTCCTGGTCTCGCTGAAGATCTGCCAGTGGATCGATACCTAGGAAGAGGCTTGCAGCATTACCCCACAAAGTAACAGGAAACTTGCTCAAGCAGACTTGATGTAGCAATAAATTGGTTTTAGGTTGTAGTCCCTTGCACTTTGAGTGCACAGACTATGTAGAATCAATATGAAAAGAAATGTCTTGTTCCCCTTCCGACACACAATCTGATGATTAAGCTCAAGAATGAGAAGGTATTTTCAAGTTATATAGCAATTGATGTTATGTCAATATCGGACCAACATCCTATAAATGCTTTGCTTTTAATGGAATATTTGCATTCCAAATAAATCAGTTAGGAGGAAGTTTTCAAAAGGATGTGAATGGACAGCCACAGGTTCCCGCCTATGCAGAAGTTTGTTTCTATATATGAACCACAAATAACTATTAGAAAAATACACCAAACTTGAAAATAGCTTTTTGTCGTCATTGTTAGTTATTACATAGTGTAAGCTCCAAGGGGGTGGCCAAGCGGTCAAAGATTTGGGTAACAACCTTGGGAGCCAATGTACAATTGCAATTGAGGCTATGCTATATGGGTTCTTAGGTGTTGGTGTGGGTAAAGTTAACCAATACTTGTGCAGGTGGGAGCTAGAATGTACTCGGTAGATTAATCGAGGTGGGCCAAGCTACTTAACCGACACCATTATAAAAATAAAAAGAAGTTACTAAATTGTGTTAGTAATCACAAGCAGTGTTGTCTCGATGCTGCGTCTATAAGCAGACTGTTTTTTTCCCGTTCTTTCTTCTTCGTTGCGTATATTGCTGCGTAGTGCGTATAAATCCCCGTTTTTGTCTTCTCTTATTTCTTCTTCTTCAGCTTTTATTTCTTTGTGTTTTTTTTAGTTTATTAATTTAATAATTGAATTTGCCATGTCACTTTACTTGTTCAATTAAAATTGCCATTAATTTATTTCCTTATTTTAGTCACTAGGCATTAGCTAATTAGGTATTCTATTTTCTCAGTAGGTGATTAGTTAATTTCTCTAAGGCACCAAGCAGTAGCTAATTATCTATGAGCCCTTCTTTTTTGAGTGTACATTTGGAATGGTGTTTAGGATTCCTATGCTTCCGAAGCTGGACTCCTGTAGTCAATATGGGATTTTATTGGGATTTCACTAGATGCATCACTTCATATTTTTGTTTTTAGAAAGGTAATTGTAATTTGCAGCCTTGTTATTGACAGCTGGGGTTGGTTGTGTTCCTTACAAGTCTTTCATCTGCCAGCCTTTAACTTGCATGACTAGGATAGTTTGTCCCATCAATCAATAAGTTCCAAAATCAGTTGCCCTATAGACAAAAGTTTTGGCCAAATTCATGGAAAAGCTAAGATATTGCAGCTGATGCAGCTTTGAAGAAGCATGTGGAAAAATGAGCTGTTGTGCTTAAACAGCCTTTTTTTTTCATATCCAAAAATAACCACGACTTCTATTGCCTCTATTATTTCTGCTACACTATGGGCTTTGATTGTTAATTAGGCTAATTACCTCATCTGTGTGGATTTTCTACAGAACACTCGGGCATCTCAGGTATCTG</genome_strand>
        <mrna_strand>TGCAGAATGACCACTACTTGCTTTCCTTAATGGACGATCAAGGTTGGGTTCCAATCTCTATTATCGCCGACTTCAAAAGG.....................................................................................................................................................................................................................................................................GTTAAAAAAATGAGTACAGATATAGCATTTATCATTGATGCATTGCAGGCTTCAAGCACTGTTGAAGTAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGACAAGTTGAGAAGACGTGATGAATGGTCAAAGTGGGTTTCAGCTAGTGCTGATCAGAAATCATCCCCTTCGATTCCGGTGGAACACTCAATTGGGAAGGTTATAAAGAATGATGAGGTCAATGAAAATAAGGAGGATGGAATTCAAGGCAGATTTTCCCAAGAAAATCATGTAGGTGAGCTTGCATCAATAGAGAAACATGCTAAAAAAGTATCAGTGTTTAGTAAAGCAGAAACCAGTAGGAAGAAATCTGGTTTCCATGGTTCAACTCACAGAGTTGACAAAGGAAGTGGTGATGCAAGAATGGTTATGGCATCAGATGTTGTAGAACAGAATGTAGATGACTTATCTAATGATTTCTCGAGCACATTCATGCTTGATGAAGAGATGGAGCTTGAAAATAAAAAGGACCAGTCCTCTTTGAGTGGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGATGAAGAAGATGATGAGATGTACGTTGAATGATGAGGCTATTGAGAAACTTGTCATTGTAACTCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACTCGGGCATCTCAGGTATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E448439" ref_strand="+" ref_description="SGN-E448439 [cSTS-2-P20]">
      <seq>gctgcatctcaagcttttgtaccccctataaatggtgggtttcgccccccatcacgtggggatccaaatgaccaagatgccaaattctacagaggaagacctaatacacaagaacgtggtagccagtttagttcagccttgtctaatcagcgacctgtgggttctaaagatgacattcagctgcaacaaagtatggggctaaggcctttcctaaggcctccatattttggtccagccccgggctacatggatggtgcaaattttcctggtcatccaggagctatatattttcttccttctccccctcctgtaagagtgccttacccacctttctttgtcccacatcctgttagctctggagcctctactccaccatcacctgcattagctttgagagagagcatattgaagcaaattgaatactatttcagtgatcagaatttgcagaatgaccactacttgctttccttaatggacgatcaaggttgggttccaatctctattatcgccgacttcaaaagggttaaaaaaatgagtacagatatagcatttatcattgatgcattgcaggcttcaagcactgttgaagtaaagggagacaagttgagaagacgtgatgaatggtcaaagtgggtttcagctagtgctgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="100722" stop="97971"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100422" g_stop="100155" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="268" r_length="268" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100154" i_stop="99869" i_length="286">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="99868" g_stop="99706" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="431" r_length="163" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="99705" i_stop="99324" i_length="382">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="99323" g_stop="99233" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="522" r_length="91" r_score="0.923"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="99232" i_stop="98972" i_length="261">
            <donor d_prob="0.980" d_score="0.94"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98971" g_stop="98900" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="594" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98899" i_stop="98329" i_length="571">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98328" g_stop="98271" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="595" r_stop="652" r_length="58" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E448439" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>652</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E448439" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100422" e_stop="100155"/>
          <exon e_start="99868" e_stop="99706"/>
          <exon e_start="99323" e_stop="99233"/>
          <exon e_start="98971" e_stop="98900"/>
          <exon e_start="98328" e_stop="98271"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGCATCTCAAGCTTTTGTACCCCCTATAAATGGTGGGTTTCGCCCCCCATCACGAGGGGATCCAAATGACCATGATGCCAAATTCTACAGAGGAAGACCTAATACACAAGAGCGAGGTAGCCAGTTTAGTTCAAGCTTGTCTAATCAGCGATCTGTGGGTTCTAAAGATGACATTCAGCTGCAACAAAGTATGGGGCTAAGGCCTTTCCTAAGGCCTCCATATTTTGGTCCAGCCCCGGGCTACATGGATGGTGCAAATTTTCCTGGTAATTTTTGCATAACTAATTTCTTGAATAAGTGACCTCATTATTCTTAAAAATACAAAATTGGCATATGGCAATTACCATCAAAAGTAGCTTGATATCCCTGGCTTTTTACCTTTAAGTTGTACCGCTCCTATTTCTCCCTCTCTTTTAATGGTGGTTTGCTGATGGCGCTAATATTGACCTTATCTACTGTTACCCCTTCTCCTTAACAGTTCATCTCTATCAGTGTAGTTAATTGTTTATTTGATTTGTTTTTAAAAGTGAATGACTACTGACTATTTTACAGGTCATCCAGGAGCTATATATTTTCTTCCTTCTCCCACTCCTGTGAGAGTTCCTTACCCACCTTTCTTTGTCCCACATTCTGTTAGCTCTGGAGCCTCTACTCCACCATCACCTGCATTAGCTTTGAGAGAGAGCATATTGAAGCAAATTGAATACTATTTCAGGTGATCACATCAAGATAAAAGTTCTATTTGTGTTGGTTGTCTTAATGTTTACTTGAATAGATGTAATTATTCCCTGATTGTGGTACTCTTTGCATCTTCATTGGTATTGTATAGTTACAGTTGTAATCTTGTAGGGCAGGAATAATAGTAGGTGACCTTTTCATGGACACTCCTTAAAATAACATGTTGAAGTTCATAATGAGGATGATCCCACTCTTTAGGGATTTATATTTCAAGAAGTATTGTTGCATAGACCAATCAAAAAAGAAGTATTGTTGCATAGATACATCTCTTGTGGGTTAATTACTTTGCCAGCAATTGTCCTAGAATTTTTTGACTACTGTAGATTGATATAAAAAATATGTCTCTTTTGCGTTGGCAGTGATCAGAATTTGCAGAATGATCGCTTCTTGCTTACCTTAATGGACGATCAAGGTTGGGTTCCAATCTCTAGTATCGCTGAGTTCAAAAGGGTATAATCTCAAAACTTCTCAGAAACAGTCTCATTTATGCTAGAGTTTCTGATAGGATGCAGTGTTTTTTTTCAAAAAAATATTGAAGTCCGTTAGTTTTTCTTTTTTGAGACTGAATCCGTTAGTTTTTCATGTGTCAAACTTGGATTTGGTCCATTCCATTCTCGTCTTTTACATTGTCTGACACATTTAAGCATTTATCCTTTCTGTGAAATGAAATAGCTCTGATTGCAGATATTCTTTTTCCCACTTCTGCTTCAGGTTAAAAAAATGAGTACAGATATAGCATTTATCATTGATGCATTGCAGGCTTCAAGCACTGTTGAAGTAAAGGTAAAATGCTTTCCCTTTGCTTGAGTAGCCCATTGTCTCTTTCCTTTCCTTTTGGCATGAAAAAAAGTAAATTTCCCAACTAATTTTTACATATATGTTCCAATTTTCTTTTACTAAGCTGTTTGTATTGTATCCTAAACATCTTTTAATTGCTTCCAAAATGGTCCCTTGGTGTACTGTTGGGCAGACTAAGACCTCCACGTAAGGTAAAAATGAAGTAAAGAAATTCAGACAGGATAAGTAAAGAAGAAAATAAACAAAAAGTATAGCAAAGACGAAACAAAAGAAACAGAAAGGTAAAGTTCAACTTGTAGGTTTCCCTGCTTGGTTTTCCTTCTTATTTGCTGCTCCGGATTCTCCCTTCCTGGTCTTTCCTTTCCTACTGACTTCACGCCATCATAACAAATTTGCAACTTGGGTAAATATATCGAGACTAATTTTGCAATTTGCTAGTAGAGAGAGTTTTGGAGTTAGCCTATCAGTAGATTTATGTTTTTCTTTGCCTTCTACATTAAATACTTCTGTCCCTTTGTCCTTATTTATAAATGTGTTGTTTGCTTAATTTCTGCAGGGAGACAAGTTGAGAAGACGTGATGAATGGTCAAAGTGGGTTTCAGCTAGTGCTGATC</genome_strand>
        <mrna_strand>GCTGCATCTCAAGCTTTTGTACCCCCTATAAATGGTGGGTTTCGCCCCCCATCACGTGGGGATCCAAATGACCAAGATGCCAAATTCTACAGAGGAAGACCTAATACACAAGAACGTGGTAGCCAGTTTAGTTCAGCCTTGTCTAATCAGCGACCTGTGGGTTCTAAAGATGACATTCAGCTGCAACAAAGTATGGGGCTAAGGCCTTTCCTAAGGCCTCCATATTTTGGTCCAGCCCCGGGCTACATGGATGGTGCAAATTTTCCTG..............................................................................................................................................................................................................................................................................................GTCATCCAGGAGCTATATATTTTCTTCCTTCTCCCCCTCCTGTAAGAGTGCCTTACCCACCTTTCTTTGTCCCACATCCTGTTAGCTCTGGAGCCTCTACTCCACCATCACCTGCATTAGCTTTGAGAGAGAGCATATTGAAGCAAATTGAATACTATTTCAG..............................................................................................................................................................................................................................................................................................................................................................................................TGATCAGAATTTGCAGAATGACCACTACTTGCTTTCCTTAATGGACGATCAAGGTTGGGTTCCAATCTCTATTATCGCCGACTTCAAAAGG.....................................................................................................................................................................................................................................................................GTTAAAAAAATGAGTACAGATATAGCATTTATCATTGATGCATTGCAGGCTTCAAGCACTGTTGAAGTAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGACAAGTTGAGAAGACGTGATGAATGGTCAAAGTGGGTTTCAGCTAGTGCTGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E422470" ref_strand="+" ref_description="SGN-E422470 [STM-40-B11]">
      <seq>gctgcatctcaagcttttgtaccccctataaatggtgggtttcgccccccatcacgtggggatccaaatgaccaagatgccaaattctacagaggaagacctaatacacaagaacgtggtagccagtttagttcagccttgtctaatcagcgacctgtgggttctaaagatgacattcagctgcaacaaagtatggggctaaggcctttcctaaggcctccatattttggtccagccccgggctacatggatggtgcaaattttcctggtcatccaggagctatatattttcttccttctccccctcctgtaagagtgccttacccacctttctttgtcccacatcctgttagctctggagcctctactccaccatcacctgcattagctttgagagagagcatattgaagcaaattgaatactatttcagtgatcagaatttgcagaatgaccactacttgctttccttaatggacgatcaaggttgggttccaatctctattatcgccgacttcaaaagggttaaaaaaatgagtacagatatagcatttatcattgatgcattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="100722" stop="98627"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100422" g_stop="100155" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="268" r_length="268" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100154" i_stop="99869" i_length="286">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="99868" g_stop="99706" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="431" r_length="163" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="99705" i_stop="99324" i_length="382">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="99323" g_stop="99233" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="522" r_length="91" r_score="0.923"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="99232" i_stop="98972" i_length="261">
            <donor d_prob="0.980" d_score="0.94"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98971" g_stop="98927" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="567" r_length="45" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E422470" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E422470" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100422" e_stop="100155"/>
          <exon e_start="99868" e_stop="99706"/>
          <exon e_start="99323" e_stop="99233"/>
          <exon e_start="98971" e_stop="98927"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGCATCTCAAGCTTTTGTACCCCCTATAAATGGTGGGTTTCGCCCCCCATCACGAGGGGATCCAAATGACCATGATGCCAAATTCTACAGAGGAAGACCTAATACACAAGAGCGAGGTAGCCAGTTTAGTTCAAGCTTGTCTAATCAGCGATCTGTGGGTTCTAAAGATGACATTCAGCTGCAACAAAGTATGGGGCTAAGGCCTTTCCTAAGGCCTCCATATTTTGGTCCAGCCCCGGGCTACATGGATGGTGCAAATTTTCCTGGTAATTTTTGCATAACTAATTTCTTGAATAAGTGACCTCATTATTCTTAAAAATACAAAATTGGCATATGGCAATTACCATCAAAAGTAGCTTGATATCCCTGGCTTTTTACCTTTAAGTTGTACCGCTCCTATTTCTCCCTCTCTTTTAATGGTGGTTTGCTGATGGCGCTAATATTGACCTTATCTACTGTTACCCCTTCTCCTTAACAGTTCATCTCTATCAGTGTAGTTAATTGTTTATTTGATTTGTTTTTAAAAGTGAATGACTACTGACTATTTTACAGGTCATCCAGGAGCTATATATTTTCTTCCTTCTCCCACTCCTGTGAGAGTTCCTTACCCACCTTTCTTTGTCCCACATTCTGTTAGCTCTGGAGCCTCTACTCCACCATCACCTGCATTAGCTTTGAGAGAGAGCATATTGAAGCAAATTGAATACTATTTCAGGTGATCACATCAAGATAAAAGTTCTATTTGTGTTGGTTGTCTTAATGTTTACTTGAATAGATGTAATTATTCCCTGATTGTGGTACTCTTTGCATCTTCATTGGTATTGTATAGTTACAGTTGTAATCTTGTAGGGCAGGAATAATAGTAGGTGACCTTTTCATGGACACTCCTTAAAATAACATGTTGAAGTTCATAATGAGGATGATCCCACTCTTTAGGGATTTATATTTCAAGAAGTATTGTTGCATAGACCAATCAAAAAAGAAGTATTGTTGCATAGATACATCTCTTGTGGGTTAATTACTTTGCCAGCAATTGTCCTAGAATTTTTTGACTACTGTAGATTGATATAAAAAATATGTCTCTTTTGCGTTGGCAGTGATCAGAATTTGCAGAATGATCGCTTCTTGCTTACCTTAATGGACGATCAAGGTTGGGTTCCAATCTCTAGTATCGCTGAGTTCAAAAGGGTATAATCTCAAAACTTCTCAGAAACAGTCTCATTTATGCTAGAGTTTCTGATAGGATGCAGTGTTTTTTTTCAAAAAAATATTGAAGTCCGTTAGTTTTTCTTTTTTGAGACTGAATCCGTTAGTTTTTCATGTGTCAAACTTGGATTTGGTCCATTCCATTCTCGTCTTTTACATTGTCTGACACATTTAAGCATTTATCCTTTCTGTGAAATGAAATAGCTCTGATTGCAGATATTCTTTTTCCCACTTCTGCTTCAGGTTAAAAAAATGAGTACAGATATAGCATTTATCATTGATGCATTG</genome_strand>
        <mrna_strand>GCTGCATCTCAAGCTTTTGTACCCCCTATAAATGGTGGGTTTCGCCCCCCATCACGTGGGGATCCAAATGACCAAGATGCCAAATTCTACAGAGGAAGACCTAATACACAAGAACGTGGTAGCCAGTTTAGTTCAGCCTTGTCTAATCAGCGACCTGTGGGTTCTAAAGATGACATTCAGCTGCAACAAAGTATGGGGCTAAGGCCTTTCCTAAGGCCTCCATATTTTGGTCCAGCCCCGGGCTACATGGATGGTGCAAATTTTCCTG..............................................................................................................................................................................................................................................................................................GTCATCCAGGAGCTATATATTTTCTTCCTTCTCCCCCTCCTGTAAGAGTGCCTTACCCACCTTTCTTTGTCCCACATCCTGTTAGCTCTGGAGCCTCTACTCCACCATCACCTGCATTAGCTTTGAGAGAGAGCATATTGAAGCAAATTGAATACTATTTCAG..............................................................................................................................................................................................................................................................................................................................................................................................TGATCAGAATTTGCAGAATGACCACTACTTGCTTTCCTTAATGGACGATCAAGGTTGGGTTCCAATCTCTATTATCGCCGACTTCAAAAGG.....................................................................................................................................................................................................................................................................GTTAAAAAAATGAGTACAGATATAGCATTTATCATTGATGCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E738284" ref_strand="+" ref_description="SGN-E738284 [LC13AD08]">
      <seq>ccgttgttttcgccttttcttcatcggagtatcactaatttgaatttatatatttatatatagaagttgctgactatggcggaaaatgagagtactggagatgatcagaaggaggtgattgagcctccaaagtcgccgtggaagactccggcgccggcgccggtgccggcggataagggttctgcgtcgtcaggggatgatgattctgattcctggccggcacttgctgatgctcagcagatgattaagtctggtgattctagttccgccgctaagttgccgtcacttccgccgcagcaggagattggcagccgcaatgttgcttctgacaaggtccgaggtgagcagctaaagttccatgggtcttctagtgccaaatcttcaaataagtcatcatccgcagttcaacaaagaccagtgcataggcacaaccaaaatggtgtgccatcatttcctgtgcccttggcttaccaccaatcaggattccctcctttttatcaaagtatggtacctatgccacatattcctcttccagggtatgcataccagccccctcgagggtctttctcaggagctgaaggtcacgtggctaggtctgatggtgatgctgcatctcaagcttttgtaccccctataaatggtgggtttcgccccccatcacgaggggatccaaatgaccatgatgccaaattctacagaggaagacctaatacacaagagcgaggtagccagttagttcaagcttgtctaatcagcgatctgtgggttctaaagatgacattcagctgcaacaaagtatggggctaaggcctttccta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="102484" stop="99910"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102184" g_stop="101852" g_length="333"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="333" r_length="333" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101851" i_stop="100696" i_length="1156">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100695" g_stop="100210" g_length="486"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="818" r_length="485" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E738284" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>819</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E738284" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102184" e_stop="101852"/>
          <exon e_start="100695" e_stop="100210"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGCCGTTTTCGCCTTTTCTTCATCGGAGTATCACTAATTTGAATTTATATATTTATATATAGAAGTTGCTGACTATGGCGGAAAATGAGAGTACTGGAGATGATCAGAAGGAGGTGATTGAGCCTCCAAAGTCGCCGTGGAAGACTCCGGCGCCGGCGCCGGTGCCGGCGGATAAGGGTTCTGCGTCGTCAGGGGATGATGATTCTGATTCCTGGCCGGCACTTGCTGATGCTCAGCAGATGATTAAGTCTGGTGATTCTAGTTCCGCCGCTAAGTTGCCGTCACTTCCGCCGCAGCAGGAGATTGGCAGCCGCAATGTTGCTTCTGACAAGGTTAGTTTGATTTTTTTTTTAATTACATTAGATTTAAAGTACTCTTTTTTTTTTATTCGTTGTTTGTATTGATTTGCGATTGTTGTGTAAAGGGGAAAAATATTTGTGGGTATATGTGATGAGTTGTTTACCTAGTTGGTTTTTGAACTATAAAGACGCCATTTTTAAGTGTATCTTTGATTGTATATATACATGGAGAAAGAAGGGAAGATATGGAATGAAGATAATCTGACTATGTCATTGTTTTGCACAGAACTAGTATTTAATATTTTACACACTAAAATTGTTTGATATAATAACAAAATGTTTCAATTTACTGAGAAAGGGAATAATAAAATTTAATATTTCATAAGGAATTAGGTTTGCATCATTTTGATGTTAGTAACATTGTTCTATACAAGAGAATGTCTGGAAGTGAATGAGTTCTGAAAGATACGACATTCTGAATGATTCTCTTGACATTTTGAGTTCACCTTCCAAGTTCAGGGCGGCAAGCATTTTAAATGTTTATTTGGGAAGTTGAAAAGTAACTGGCTGAATTATCTGAAGAGGCAGTGTTGCTGGAGCATCTACTATAAGAGGTGGCATTGTTGTTCATGAAAATTTTGCTGCAAAAAATGGCAGAATGCTGGTCGGAATAGTACTGGTGCTATCGAAACGATTATTGGAAAGACGCTCGTTGCCGCTGGAATTGTCACTAGAAAGCTGAGAGATGTCACCAAGTTGGTTACCAAAAAAAGGTGTAGTATTGCCGAACAATTGCTAGAGAAGAAGTGTACTGCTGCAGAAACAGTCACCCGAATAGATATTGTGGTCTTGTGTAGCTGATCCATGTAGCGTGGGTTTAAGATGTAGTTCTTTTGGTTGTCATAATTTTTGAGATTTTTGATGTTTTTGTAGTGTGCTTTTCTTCCATCTGTTTCAGCTTAAATGTCAAAACTGATTAGTCATTGTTCTATGTCTGTTGATTGTCTGTTGAAGTAATACTTTGTCTTTATAACTTTGCAAGATACTGCATCATATCTGGCACATTCAAATAGGTTCTTAATATGGCAACTTTGTCCGTCATTACACCTCTGCGGATGGATTTATTCCCTACTACCATTAACTAGGATGTATTACCATGAAATATATTTGATGATATGTTGTATTGTAGGTCCGAGGTGAGCAGCTAAAGTTCCATGGGTCTTCTAGTGCCAAATCTTCAAATAAGTCATCATCCGCAGTTCAACAAAGACCAGTGCATAGGCACAACCAAAATGGTGTGCCATCATTTCCTGTGCCCTTGGCTTACCACCAATCAGGATTCCCTCCTTTTTATCAAAGTATGGTACCTATGCCACATATTCCTCTTCCAGGGTATGCATACCAGCCCCCTCGAGGGTCTTTCTCAGGAGCTGAAGGTCACGTGGCTAGGTCTGATGGTGATGCTGCATCTCAAGCTTTTGTACCCCCTATAAATGGTGGGTTTCGCCCCCCATCACGAGGGGATCCAAATGACCATGATGCCAAATTCTACAGAGGAAGACCTAATACACAAGAGCGAGGTAGCCAGTTTAGTTCAAGCTTGTCTAATCAGCGATCTGTGGGTTCTAAAGATGACATTCAGCTGCAACAAAGTATGGGGCTAAGGCCTTTCCTA</genome_strand>
        <mrna_strand>CCGTTGTTTTCGCCTTTTCTTCATCGGAGTATCACTAATTTGAATTTATATATTTATATATAGAAGTTGCTGACTATGGCGGAAAATGAGAGTACTGGAGATGATCAGAAGGAGGTGATTGAGCCTCCAAAGTCGCCGTGGAAGACTCCGGCGCCGGCGCCGGTGCCGGCGGATAAGGGTTCTGCGTCGTCAGGGGATGATGATTCTGATTCCTGGCCGGCACTTGCTGATGCTCAGCAGATGATTAAGTCTGGTGATTCTAGTTCCGCCGCTAAGTTGCCGTCACTTCCGCCGCAGCAGGAGATTGGCAGCCGCAATGTTGCTTCTGACAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGAGGTGAGCAGCTAAAGTTCCATGGGTCTTCTAGTGCCAAATCTTCAAATAAGTCATCATCCGCAGTTCAACAAAGACCAGTGCATAGGCACAACCAAAATGGTGTGCCATCATTTCCTGTGCCCTTGGCTTACCACCAATCAGGATTCCCTCCTTTTTATCAAAGTATGGTACCTATGCCACATATTCCTCTTCCAGGGTATGCATACCAGCCCCCTCGAGGGTCTTTCTCAGGAGCTGAAGGTCACGTGGCTAGGTCTGATGGTGATGCTGCATCTCAAGCTTTTGTACCCCCTATAAATGGTGGGTTTCGCCCCCCATCACGAGGGGATCCAAATGACCATGATGCCAAATTCTACAGAGGAAGACCTAATACACAAGAGCGAGGTAGCCAG-TTAGTTCAAGCTTGTCTAATCAGCGATCTGTGGGTTCTAAAGATGACATTCAGCTGCAACAAAGTATGGGGCTAAGGCCTTTCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E326684" ref_strand="+" ref_description="SGN-E326684 [cTOC-17-J7]">
      <seq>gtgattctagttccgccgctaagttgccgtcacttccgccgcagcaggagattggcagccgcaatgttgcttctgacaaggtccgaggtgagcagctaaagttccatgggtcttctagtgccaaatcttcaaataagtcatcatccgcagttcaacaaagaccagtgcataggcacaaccaaaatggtgtgccatcatttcctgtgcccttggcttaccaccaatcaggattccctcctttttatcaaagtatggtacctatgccacatattcctcttccagggtatgcataccagccccctcgagggtctttctcaggagctgaaggtcacgtggctaggtctgatggtgatgctgcatctcaagcttttgtaccccctataaatggtgggtttcgccccccatcacgaggggatccaaatgaccatgatgccaaattctacagaggaagacctaatacaccagagcgaggtagccagtttagttcaagcttgtctaatcagcgatctgtgggttctaaagatgacattcagctgcaacaaagtatggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="102231" stop="99926"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101931" g_stop="101852" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101851" i_stop="100696" i_length="1156">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100695" g_stop="100226" g_length="470"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="550" r_length="470" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E326684" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>550</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E326684" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101931" e_stop="101852"/>
          <exon e_start="100695" e_stop="100226"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGATTCTAGTTCCGCCGCTAAGTTGCCGTCACTTCCGCCGCAGCAGGAGATTGGCAGCCGCAATGTTGCTTCTGACAAGGTTAGTTTGATTTTTTTTTTAATTACATTAGATTTAAAGTACTCTTTTTTTTTTATTCGTTGTTTGTATTGATTTGCGATTGTTGTGTAAAGGGGAAAAATATTTGTGGGTATATGTGATGAGTTGTTTACCTAGTTGGTTTTTGAACTATAAAGACGCCATTTTTAAGTGTATCTTTGATTGTATATATACATGGAGAAAGAAGGGAAGATATGGAATGAAGATAATCTGACTATGTCATTGTTTTGCACAGAACTAGTATTTAATATTTTACACACTAAAATTGTTTGATATAATAACAAAATGTTTCAATTTACTGAGAAAGGGAATAATAAAATTTAATATTTCATAAGGAATTAGGTTTGCATCATTTTGATGTTAGTAACATTGTTCTATACAAGAGAATGTCTGGAAGTGAATGAGTTCTGAAAGATACGACATTCTGAATGATTCTCTTGACATTTTGAGTTCACCTTCCAAGTTCAGGGCGGCAAGCATTTTAAATGTTTATTTGGGAAGTTGAAAAGTAACTGGCTGAATTATCTGAAGAGGCAGTGTTGCTGGAGCATCTACTATAAGAGGTGGCATTGTTGTTCATGAAAATTTTGCTGCAAAAAATGGCAGAATGCTGGTCGGAATAGTACTGGTGCTATCGAAACGATTATTGGAAAGACGCTCGTTGCCGCTGGAATTGTCACTAGAAAGCTGAGAGATGTCACCAAGTTGGTTACCAAAAAAAGGTGTAGTATTGCCGAACAATTGCTAGAGAAGAAGTGTACTGCTGCAGAAACAGTCACCCGAATAGATATTGTGGTCTTGTGTAGCTGATCCATGTAGCGTGGGTTTAAGATGTAGTTCTTTTGGTTGTCATAATTTTTGAGATTTTTGATGTTTTTGTAGTGTGCTTTTCTTCCATCTGTTTCAGCTTAAATGTCAAAACTGATTAGTCATTGTTCTATGTCTGTTGATTGTCTGTTGAAGTAATACTTTGTCTTTATAACTTTGCAAGATACTGCATCATATCTGGCACATTCAAATAGGTTCTTAATATGGCAACTTTGTCCGTCATTACACCTCTGCGGATGGATTTATTCCCTACTACCATTAACTAGGATGTATTACCATGAAATATATTTGATGATATGTTGTATTGTAGGTCCGAGGTGAGCAGCTAAAGTTCCATGGGTCTTCTAGTGCCAAATCTTCAAATAAGTCATCATCCGCAGTTCAACAAAGACCAGTGCATAGGCACAACCAAAATGGTGTGCCATCATTTCCTGTGCCCTTGGCTTACCACCAATCAGGATTCCCTCCTTTTTATCAAAGTATGGTACCTATGCCACATATTCCTCTTCCAGGGTATGCATACCAGCCCCCTCGAGGGTCTTTCTCAGGAGCTGAAGGTCACGTGGCTAGGTCTGATGGTGATGCTGCATCTCAAGCTTTTGTACCCCCTATAAATGGTGGGTTTCGCCCCCCATCACGAGGGGATCCAAATGACCATGATGCCAAATTCTACAGAGGAAGACCTAATACACAAGAGCGAGGTAGCCAGTTTAGTTCAAGCTTGTCTAATCAGCGATCTGTGGGTTCTAAAGATGACATTCAGCTGCAACAAAGTATGGG</genome_strand>
        <mrna_strand>GTGATTCTAGTTCCGCCGCTAAGTTGCCGTCACTTCCGCCGCAGCAGGAGATTGGCAGCCGCAATGTTGCTTCTGACAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGAGGTGAGCAGCTAAAGTTCCATGGGTCTTCTAGTGCCAAATCTTCAAATAAGTCATCATCCGCAGTTCAACAAAGACCAGTGCATAGGCACAACCAAAATGGTGTGCCATCATTTCCTGTGCCCTTGGCTTACCACCAATCAGGATTCCCTCCTTTTTATCAAAGTATGGTACCTATGCCACATATTCCTCTTCCAGGGTATGCATACCAGCCCCCTCGAGGGTCTTTCTCAGGAGCTGAAGGTCACGTGGCTAGGTCTGATGGTGATGCTGCATCTCAAGCTTTTGTACCCCCTATAAATGGTGGGTTTCGCCCCCCATCACGAGGGGATCCAAATGACCATGATGCCAAATTCTACAGAGGAAGACCTAATACACCAGAGCGAGGTAGCCAGTTTAGTTCAAGCTTGTCTAATCAGCGATCTGTGGGTTCTAAAGATGACATTCAGCTGCAACAAAGTATGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E737672" ref_strand="+" ref_description="SGN-E737672 [LC10DC05]">
      <seq>attcaatattttgtctctttgtctgaaacactcatcaaccctagtagtatctctctctcagccaccacacaccactgtaaacctccgccgttttcgccttttcttcatcggagtatcactaatttgaatttatatatttatatatagaagttgctgactatggcggaaaatgagagtactggagatgatcagaaggaggtgattgagcctccaaagtcgccgtggaagactccggcgccggcgccggtgccggcggataagggttctgcgtcgtcaggggatgatgattctgattcctggccggcacttgctgatgctcagcagatgattaagtctggtgattctagttccgccgctaagttgccgtcacttccgccgcagcaggagattggcagccgcaatgttgcttctgacaaggtccgaggtgagcagctaaagttccatgggtcttctagtgccaaatcttcaaataagtcatcatccgcagttcaacaaagaccagtgcataggcacaaccaaaatggtgtgccatcatttcctgtgcccttggcttaccaccaatcaggattccctcctttttatcaaagtatggtacctatgccacatattcctcttccagggtatgcataccaaccccctcgagggtctttctcaagagctgaatggcacgtggctaggtctgatggtgatgctgcatctcaagcttttgtaccccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="102568" stop="100096"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102268" g_stop="101852" g_length="417"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="417" r_length="417" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101851" i_stop="100696" i_length="1156">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100695" g_stop="100396" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="717" r_length="300" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E737672" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E737672" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102268" e_stop="101852"/>
          <exon e_start="100695" e_stop="100396"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCAATATTTTGTCTCTTTGTCTGAAACACTCATCAACCCTAGTAGTATCTCTCTCTCAGCCACCACACACCACTGTAAACCTCCGCCGTTTTCGCCTTTTCTTCATCGGAGTATCACTAATTTGAATTTATATATTTATATATAGAAGTTGCTGACTATGGCGGAAAATGAGAGTACTGGAGATGATCAGAAGGAGGTGATTGAGCCTCCAAAGTCGCCGTGGAAGACTCCGGCGCCGGCGCCGGTGCCGGCGGATAAGGGTTCTGCGTCGTCAGGGGATGATGATTCTGATTCCTGGCCGGCACTTGCTGATGCTCAGCAGATGATTAAGTCTGGTGATTCTAGTTCCGCCGCTAAGTTGCCGTCACTTCCGCCGCAGCAGGAGATTGGCAGCCGCAATGTTGCTTCTGACAAGGTTAGTTTGATTTTTTTTTTAATTACATTAGATTTAAAGTACTCTTTTTTTTTTATTCGTTGTTTGTATTGATTTGCGATTGTTGTGTAAAGGGGAAAAATATTTGTGGGTATATGTGATGAGTTGTTTACCTAGTTGGTTTTTGAACTATAAAGACGCCATTTTTAAGTGTATCTTTGATTGTATATATACATGGAGAAAGAAGGGAAGATATGGAATGAAGATAATCTGACTATGTCATTGTTTTGCACAGAACTAGTATTTAATATTTTACACACTAAAATTGTTTGATATAATAACAAAATGTTTCAATTTACTGAGAAAGGGAATAATAAAATTTAATATTTCATAAGGAATTAGGTTTGCATCATTTTGATGTTAGTAACATTGTTCTATACAAGAGAATGTCTGGAAGTGAATGAGTTCTGAAAGATACGACATTCTGAATGATTCTCTTGACATTTTGAGTTCACCTTCCAAGTTCAGGGCGGCAAGCATTTTAAATGTTTATTTGGGAAGTTGAAAAGTAACTGGCTGAATTATCTGAAGAGGCAGTGTTGCTGGAGCATCTACTATAAGAGGTGGCATTGTTGTTCATGAAAATTTTGCTGCAAAAAATGGCAGAATGCTGGTCGGAATAGTACTGGTGCTATCGAAACGATTATTGGAAAGACGCTCGTTGCCGCTGGAATTGTCACTAGAAAGCTGAGAGATGTCACCAAGTTGGTTACCAAAAAAAGGTGTAGTATTGCCGAACAATTGCTAGAGAAGAAGTGTACTGCTGCAGAAACAGTCACCCGAATAGATATTGTGGTCTTGTGTAGCTGATCCATGTAGCGTGGGTTTAAGATGTAGTTCTTTTGGTTGTCATAATTTTTGAGATTTTTGATGTTTTTGTAGTGTGCTTTTCTTCCATCTGTTTCAGCTTAAATGTCAAAACTGATTAGTCATTGTTCTATGTCTGTTGATTGTCTGTTGAAGTAATACTTTGTCTTTATAACTTTGCAAGATACTGCATCATATCTGGCACATTCAAATAGGTTCTTAATATGGCAACTTTGTCCGTCATTACACCTCTGCGGATGGATTTATTCCCTACTACCATTAACTAGGATGTATTACCATGAAATATATTTGATGATATGTTGTATTGTAGGTCCGAGGTGAGCAGCTAAAGTTCCATGGGTCTTCTAGTGCCAAATCTTCAAATAAGTCATCATCCGCAGTTCAACAAAGACCAGTGCATAGGCACAACCAAAATGGTGTGCCATCATTTCCTGTGCCCTTGGCTTACCACCAATCAGGATTCCCTCCTTTTTATCAAAGTATGGTACCTATGCCACATATTCCTCTTCCAGGGTATGCATACCAGCCCCCTCGAGGGTCTTTCTCAGGAGCTGAAGGTCACGTGGCTAGGTCTGATGGTGATGCTGCATCTCAAGCTTTTGTACCCCCT</genome_strand>
        <mrna_strand>ATTCAATATTTTGTCTCTTTGTCTGAAACACTCATCAACCCTAGTAGTATCTCTCTCTCAGCCACCACACACCACTGTAAACCTCCGCCGTTTTCGCCTTTTCTTCATCGGAGTATCACTAATTTGAATTTATATATTTATATATAGAAGTTGCTGACTATGGCGGAAAATGAGAGTACTGGAGATGATCAGAAGGAGGTGATTGAGCCTCCAAAGTCGCCGTGGAAGACTCCGGCGCCGGCGCCGGTGCCGGCGGATAAGGGTTCTGCGTCGTCAGGGGATGATGATTCTGATTCCTGGCCGGCACTTGCTGATGCTCAGCAGATGATTAAGTCTGGTGATTCTAGTTCCGCCGCTAAGTTGCCGTCACTTCCGCCGCAGCAGGAGATTGGCAGCCGCAATGTTGCTTCTGACAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGAGGTGAGCAGCTAAAGTTCCATGGGTCTTCTAGTGCCAAATCTTCAAATAAGTCATCATCCGCAGTTCAACAAAGACCAGTGCATAGGCACAACCAAAATGGTGTGCCATCATTTCCTGTGCCCTTGGCTTACCACCAATCAGGATTCCCTCCTTTTTATCAAAGTATGGTACCTATGCCACATATTCCTCTTCCAGGGTATGCATACCAACCCCCTCGAGGGTCTTTCTCAAGAGCTGAATGGCACGTGGCTAGGTCTGATGGTGATGCTGCATCTCAAGCTTTTGTACCCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E739003" ref_strand="+" ref_description="SGN-E739003 [LC15DB06]">
      <seq>cccttattttgtctacgatatctgaaacactcatcaaccctgagtattgtgctctctctcaaccaccacacaccagctgtaaactctccgccgattttcgccttttcttcatcggagtatcacaaattagaatttatacatttatatatagcaagttgctgactatggcggaaaatgagagtactggagatgatcagaaggaggtgattgagcctccaaagtcgccgtggaagactccggcgccggcgcaggtgccggcggataagggttctgcgacgtcgggggatgatgattctaattcctggccggcacttgctgatgctcagcagatgattaagtctggtgatactagttccgccgctaagttgccgtcacttctgccgaagcaggagattggcagccgcaatgttgcttctgacaaggaccgaggtgagcagctaaagtcccatgggtcttctagtgccaaatcttcaaataagtcatcatccgcagttcaacaaagaccagtgcataggcacataccaaaatggtgtgccgtcatttcctgtgcccttggcttaccaccaatcaggattccctcctttattatcaaagtatggtacctatgctacatattcctcttccagggtatgcataccagcctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="102562" stop="100176"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102266" g_stop="101852" g_length="415"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="422" r_length="422" r_score="0.920"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101851" i_stop="100696" i_length="1156">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100695" g_stop="100475" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="645" r_length="223" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E739003" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E739003" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102266" e_stop="101852"/>
          <exon e_start="100695" e_stop="100475"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATATTTTGTCT-CTTTGTCTGAAACACTCATCAACCCT-AGTAGTAT-CTCTCTCTCAGCCACCACACACCA-CTGTAAAC-CTCCGCCG-TTTTCGCCTTTTCTTCATCGGAGTATCACTAATTTGAATTTATATATTTATATATAG-AAGTTGCTGACTATGGCGGAAAATGAGAGTACTGGAGATGATCAGAAGGAGGTGATTGAGCCTCCAAAGTCGCCGTGGAAGACTCCGGCGCCGGCGCCGGTGCCGGCGGATAAGGGTTCTGCGTCGTCAGGGGATGATGATTCTGATTCCTGGCCGGCACTTGCTGATGCTCAGCAGATGATTAAGTCTGGTGATTCTAGTTCCGCCGCTAAGTTGCCGTCACTTCCGCCGCAGCAGGAGATTGGCAGCCGCAATGTTGCTTCTGACAAGGTTAGTTTGATTTTTTTTTTAATTACATTAGATTTAAAGTACTCTTTTTTTTTTATTCGTTGTTTGTATTGATTTGCGATTGTTGTGTAAAGGGGAAAAATATTTGTGGGTATATGTGATGAGTTGTTTACCTAGTTGGTTTTTGAACTATAAAGACGCCATTTTTAAGTGTATCTTTGATTGTATATATACATGGAGAAAGAAGGGAAGATATGGAATGAAGATAATCTGACTATGTCATTGTTTTGCACAGAACTAGTATTTAATATTTTACACACTAAAATTGTTTGATATAATAACAAAATGTTTCAATTTACTGAGAAAGGGAATAATAAAATTTAATATTTCATAAGGAATTAGGTTTGCATCATTTTGATGTTAGTAACATTGTTCTATACAAGAGAATGTCTGGAAGTGAATGAGTTCTGAAAGATACGACATTCTGAATGATTCTCTTGACATTTTGAGTTCACCTTCCAAGTTCAGGGCGGCAAGCATTTTAAATGTTTATTTGGGAAGTTGAAAAGTAACTGGCTGAATTATCTGAAGAGGCAGTGTTGCTGGAGCATCTACTATAAGAGGTGGCATTGTTGTTCATGAAAATTTTGCTGCAAAAAATGGCAGAATGCTGGTCGGAATAGTACTGGTGCTATCGAAACGATTATTGGAAAGACGCTCGTTGCCGCTGGAATTGTCACTAGAAAGCTGAGAGATGTCACCAAGTTGGTTACCAAAAAAAGGTGTAGTATTGCCGAACAATTGCTAGAGAAGAAGTGTACTGCTGCAGAAACAGTCACCCGAATAGATATTGTGGTCTTGTGTAGCTGATCCATGTAGCGTGGGTTTAAGATGTAGTTCTTTTGGTTGTCATAATTTTTGAGATTTTTGATGTTTTTGTAGTGTGCTTTTCTTCCATCTGTTTCAGCTTAAATGTCAAAACTGATTAGTCATTGTTCTATGTCTGTTGATTGTCTGTTGAAGTAATACTTTGTCTTTATAACTTTGCAAGATACTGCATCATATCTGGCACATTCAAATAGGTTCTTAATATGGCAACTTTGTCCGTCATTACACCTCTGCGGATGGATTTATTCCCTACTACCATTAACTAGGATGTATTACCATGAAATATATTTGATGATATGTTGTATTGTAGGTCCGAGGTGAGCAGCTAAAGTTCCATGGGTCTTCTAGTGCCAAATCTTCAAATAAGTCATCATCCGCAGTTCAACAAAGACCAGTGCATAGGCACA-ACCAAAATGGTGTGCCATCATTTCCTGTGCCCTTGGCTTACCACCAATCAGGATTCCCTCCTTT-TTATCAAAGTATGGTACCTATGCCACATATTCCTCTTCCAGGGTATGCATACCAGCCCCC</genome_strand>
        <mrna_strand>CCCTTATTTTGTCTACGATATCTGAAACACTCATCAACCCTGAGTATTGTGCTCTCTCTCAACCACCACACACCAGCTGTAAACTCTCCGCCGATTTTCGCCTTTTCTTCATCGGAGTATCACAAATTAGAATTTATACATTTATATATAGCAAGTTGCTGACTATGGCGGAAAATGAGAGTACTGGAGATGATCAGAAGGAGGTGATTGAGCCTCCAAAGTCGCCGTGGAAGACTCCGGCGCCGGCGCAGGTGCCGGCGGATAAGGGTTCTGCGACGTCGGGGGATGATGATTCTAATTCCTGGCCGGCACTTGCTGATGCTCAGCAGATGATTAAGTCTGGTGATACTAGTTCCGCCGCTAAGTTGCCGTCACTTCTGCCGAAGCAGGAGATTGGCAGCCGCAATGTTGCTTCTGACAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGAGGTGAGCAGCTAAAGTCCCATGGGTCTTCTAGTGCCAAATCTTCAAATAAGTCATCATCCGCAGTTCAACAAAGACCAGTGCATAGGCACATACCAAAATGGTGTGCCGTCATTTCCTGTGCCCTTGGCTTACCACCAATCAGGATTCCCTCCTTTATTATCAAAGTATGGTACCTATGCTACATATTCCTCTTCCAGGGTATGCATACCAGCCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E313021" ref_strand="+" ref_description="SGN-E313021 [cTOA-14-C23]">
      <seq>ttgtctgaaacactcatcaaccctactagtatggctctctcagccaccacacaccactgtaaacctccgccgttttcgccttttcttcatcggagtgatcactaatttgaatttatatatctatatatagaagttgctgactatggcggaaaatgagagtactggagatgatcagaaggaggtgattgagcctccaaagtcgccgtggaagactccggcgccggcgccggagccggcggataaaggttctgcgtcgtcaggggatgatgattctgactcctggccggcacttgctgatgctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="102550" stop="101650"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102250" g_stop="101950" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="302" r_length="302" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E313021" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>301</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E313021" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102250" e_stop="101950"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTCTGAAACACTCATCAACCCTAGTAGTATCTCTCTCTCAGCCACCACACACCACTGTAAACCTCCGCCGTTTTCGCCTTTTCTTCATCGGAGT-ATCACTAATTTGAATTTATATATTTATATATAGAAGTTGCTGACTATGGCGGAAAATGAGAGTACTGGAGATGATCAGAAGGAGGTGATTGAGCCTCCAAAGTCGCCGTGGAAGACTCCGGCGCCGGCGCCGGTGCCGGCGGATAAGGGTTCTGCGTCGTCAGGGGATGATGATTCTGATTCCTGGCCGGCACTTGCTGATGCTC</genome_strand>
        <mrna_strand>TTGTCTGAAACACTCATCAACCCTACTAGTATGGCTCTCTCAGCCACCACACACCACTGTAAACCTCCGCCGTTTTCGCCTTTTCTTCATCGGAGTGATCACTAATTTGAATTTATATATCTATATATAGAAGTTGCTGACTATGGCGGAAAATGAGAGTACTGGAGATGATCAGAAGGAGGTGATTGAGCCTCCAAAGTCGCCGTGGAAGACTCCGGCGCCGGCGCCGGAGCCGGCGGATAAAGGTTCTGCGTCGTCAGGGGATGATGATTCTGACTCCTGGCCGGCACTTGCTGATGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E585150" ref_strand="-" ref_description="SGN-E585150 [66869]">
      <seq>cagggacaattatagagagcaaagttttgtcatccaaggaacaatgacttctatctgtgtgcccacgcgggaatgattggtacgactcgacctacacattaccatgtgttgttggatgaagttggtttctcccctgatgaacttcaagaacttgttcataatctgtcctatgtgtaccaaagaagcacaactgctatatccattgtggctccgataagttatgcccatttggctgccacacaagtgggacaatggatgaaattcgaggatgcatcagagacatcgtcaagccatggtggtctgacaaatgctggtccagttactgttcctcagttgccccgtcttcaagagaatgttgctagctccatgttcttctgttgaggcctgtgcgcctcctgttttactgtacgcggttaatgtatgctgtagacgaatggtttctgtaaatagctctagtttaacagcacttggagtctgaaccttgtccgagtgacctcccaaaactccttagttttattcggtacaatattaggtctgttgccctattcaggtctcccatgcatcgttttcgcgcttctgttcctcggaacaattttgctatgtatctgttaaatgcatagggattaacctggtggttgtgacaatgcaacaattatgcttttttatatgtaaatggcaacgctggaatctttgtaggattttaaaaaaaaaaaaaaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="104560" stop="71439"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104260" g_stop="104184" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="0.909"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="0.94"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104091" g_stop="103997" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="173" r_length="95" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103">
            <donor d_prob="0.827" d_score="0.98"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103893" g_stop="103862" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="205" r_length="32" r_score="0.969"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103779" g_stop="103311" g_length="469"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="675" r_length="470" r_score="0.908"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="103310" i_stop="102927" i_length="384">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.457" a_score="0.53"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="102926" g_stop="102880" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="676" r_stop="721" r_length="46" r_score="0.532"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E585150" ref_strand="-">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E585150" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="104260" e_stop="104184"/>
          <exon e_start="104091" e_stop="103997"/>
          <exon e_start="103893" e_stop="103862"/>
          <exon e_start="103779" e_stop="103311"/>
          <exon e_start="102926" e_stop="102880"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGGACAATTATAGATAACAAAG-TTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGTGTAAGTATTGCATAAATTGGATTCTTCGAAGCTGGCCCGAGTTTTGAACTTTTAAATCATAGCAGTTGCAGTCAATTCTAATTATTATACACACTTCTTGCAGGTACCAAAGAAGCACTACTGCTATATCCATTGGTAAATATAAGCATATTTGTACAAGTGCTGTTATATTTTCCTTCAGCTTGTGCCCTCACTTCCTTTTCCACATTATATGCAGTGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAACAACTTAG--TTATGCGGTACAATACTAGGTCTGTTGCCATATTCAGGTCT--CATGCATATTTTTCGCGCTTCTGTTCTCCTGAACAATTTTGCTATGTATCTGTAAAATGCATAGAGATTAACCTGGTGG-TGTGACTATGCATCAATTATGCTTTTTTATATGTAAATGGTAATATATAACTTGTTTTTTTCCCGCTTTTATTAGGGAAGTTATTTTCCTCGTTTTTAAGGAACTTGTTTTTTGCAAAAAAAATATTTTTTTCAACTAACTAAACCAAAAAAAACAAAAAGTATTTTCTTTGATACTGATTAGACACACTCTTAACCCCACCTTTGTTAGAAAATGTTTGTTGTAAGTTACAAAAAATGGTATTTTGAAAAATAATTTTTATGCAAAATTTAAGCGACTTTTTCATTATTTCAAAAAAATAAATAAATTTGGAGATAAGCAAATAAAAATTGGATAACAGTCCGTAAAATTTTCCAGAATAATAGTGAGAATATCTATAAATTTTTTATAGTCTGAATTAGTCCAATTTTCTCTCTTTTGTAGCTAAAATCAGGAATACCTATATTTTTTCAATCAAAATAAATCCATTC</genome_strand>
        <mrna_strand>CAGGGACAATTATAGAGAGCAAAGTTTTGTCATCCAAGGAACAATGACTTCTATCTGTGTGCCCACGCGGGAATGATT............................................................................................GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCCCCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT.......................................................................................................GTACCAAAGAAGCACAACTGCTATATCCATTG..................................................................................TGGCTCCGATAAGTTATGCCCATTTGGCTGCCACACAAGTGGGACAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACAAATGCTGGTCCAGTTACTGTTCCTCAGTTGCCCCGTCTTCAAGAGAATGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTG---CGCCTCCTGTTTTACTGTACGCGGTTAATGTATGCTGTAGACGAATGGTTTCTGTAAATAGCTCTAGTTTAACAGCACTTGGAGTCTGAACCTTGTCCGAGTGACCTCCC-AAAACTCCTTAGTTTTATTCGGTACAATATTAGGTCTGTTGCCCTATTCAGGTCTCCCATGCATCGTTTTCGCGCTTCTGTTCCTCGGAACAATTTTGCTATGTATCTGTTAAATGCATAGGGATTAACCTGGTGGTTGTGACAATGCAACAATTATGCTTTTTTATATGTAAATG................................................................................................................................................................................................................................................................................................................................................................................................-GCAACGCTGGAATCTTTGTAGGATTTTAAAAAAAAAAAAAAAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369980" ref_strand="-" ref_description="SGN-E369980 [TUS-26-L15](-)">
      <seq>tttttttttttttttttttttttttttttaaaaaagcgggaaaaaaacaagttatatattaccatttacatataaaaaagcataattgatgcatagtcacaccaccaggttaatttttatgcattttacagatacatagcaaaattgttcaggagaacagaagcgcgaaaaatatgcatgagacctgaatatggcaacagacctagtattgtaccgcataactaagttgtttttgggaggtcactaggacaaggttcgtactccaagtgctgtcaaactagagctatttacagaaaccatttgtctagagcatacattaaccgcgtagagtaaaacaggaggtggtgcacaggcctcaacaaaaaaacatggagctagcaacgttctcctgaagacggggcaattgaggaacagta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71435" stop="103964"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103190" g_stop="103225" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="0.722"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103226" i_stop="103284" i_length="59">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103285" g_stop="103664" g_length="380"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="416" r_length="380" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E369980" ref_strand="-">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>416</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369980" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="103190" e_stop="103225"/>
          <exon e_start="103285" e_stop="103664"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTGTTTTTTTTGGTTTAGTTAGTTGAAAAAAATATTTTTTTTGCAAAAAACAAGTTCCTTAAAAACGAGGAAAATAACTTCCCTAATAAAAGCGGGAAAAAAACAAGTTATATATTACCATTTACATATAAAAAAGCATAATTGATGCATAGTCACACCACCAGGTTAATCTCTATGCATTTTACAGATACATAGCAAAATTGTTCAGGAGAACAGAAGCGCGAAAAATATGCATGAGACCTGAATATGGCAACAGACCTAGTATTGTACCGCATAACTAAGTTGTTTTTGGGAGGTCACTAGGACAAGGTTCGTACTCCAAGTGCTGTCAAACTAGAGCTATTTACAGAAACCATTTGTCTAGAGCATACATTAACCGCGTAGAGTAAAACAGGAGGTGGTGCACAGGCCTCAACAGAAGAACATGGAGCTAGCAACGTTCTCCTGAAGACGGGGCAATTGAGGAACAGTA</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAG...........................................................CGGGAAAAAAACAAGTTATATATTACCATTTACATATAAAAAAGCATAATTGATGCATAGTCACACCACCAGGTTAATTTTTATGCATTTTACAGATACATAGCAAAATTGTTCAGGAGAACAGAAGCGCGAAAAATATGCATGAGACCTGAATATGGCAACAGACCTAGTATTGTACCGCATAACTAAGTTGTTTTTGGGAGGTCACTAGGACAAGGTTCGTACTCCAAGTGCTGTCAAACTAGAGCTATTTACAGAAACCATTTGTCTAGAGCATACATTAACCGCGTAGAGTAAAACAGGAGGTGGTGCACAGGCCTCAACAAAAAAACATGGAGCTAGCAACGTTCTCCTGAAGACGGGGCAATTGAGGAACAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E738581" ref_strand="+" ref_description="SGN-E738581 [LC14AG12]">
      <seq>gtcattgttacgactcgacctacacattaccatgtgttgttggatgaagttggtttctcacctgatgaacttcaagaacttgttcataatctgtcctatgtgtaccaaagaagcactactgctatatccattgtggctccgataagttatgcccatttggccgccacacaggtgggtcaatggatgaaattcgaggatgcatcagagacatcgtcaagccatggtggtctgactaatgctggtccagttactgttcctcaattgccccgtcttcaggagaacgttgctagctccatgttcttctgttgaggcctgtgcaccacctcctgttttactctacgcggttaatgtatgctctagacaaatggtttctgtaaatagctctagtttgacagcacttggagtacgaaccttgtcctagtgacctcccaaaaacaacttagttatgcggtacaatactaggtctgttgccatattcaggtctcatgcatatttttcgcgcttctgttctcctgaacaattttgctatgtatctgtaaaatgcatagagattaacctggtggtgtgactatgcatcaattatgcttttttatatgtaaatggtaatatataacttgtttttttcccgcttttattagggaagtta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="104391" stop="102967"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104189" g_stop="104184" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="6" r_length="6" r_score="0.667"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="0.00"/>
            <acceptor a_prob="0.988" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104091" g_stop="103997" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="101" r_length="95" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103">
            <donor d_prob="0.827" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103893" g_stop="103862" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="133" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103779" g_stop="103267" g_length="513"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="646" r_length="513" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E738581" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>646</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E738581" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104189" e_stop="104184"/>
          <exon e_start="104091" e_stop="103997"/>
          <exon e_start="103893" e_stop="103862"/>
          <exon e_start="103779" e_stop="103267"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGTGTAAGTATTGCATAAATTGGATTCTTCGAAGCTGGCCCGAGTTTTGAACTTTTAAATCATAGCAGTTGCAGTCAATTCTAATTATTATACACACTTCTTGCAGGTACCAAAGAAGCACTACTGCTATATCCATTGGTAAATATAAGCATATTTGTACAAGTGCTGTTATATTTTCCTTCAGCTTGTGCCCTCACTTCCTTTTCCACATTATATGCAGTGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAACAACTTAGTTATGCGGTACAATACTAGGTCTGTTGCCATATTCAGGTCTCATGCATATTTTTCGCGCTTCTGTTCTCCTGAACAATTTTGCTATGTATCTGTAAAATGCATAGAGATTAACCTGGTGGTGTGACTATGCATCAATTATGCTTTTTTATATGTAAATGGTAATATATAACTTGTTTTTTTCCCGCTTTTATTAGGGAAGTTA</genome_strand>
        <mrna_strand>GTCATT............................................................................................GTTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT.......................................................................................................GTACCAAAGAAGCACTACTGCTATATCCATTG..................................................................................TGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAACAACTTAGTTATGCGGTACAATACTAGGTCTGTTGCCATATTCAGGTCTCATGCATATTTTTCGCGCTTCTGTTCTCCTGAACAATTTTGCTATGTATCTGTAAAATGCATAGAGATTAACCTGGTGGTGTGACTATGCATCAATTATGCTTTTTTATATGTAAATGGTAATATATAACTTGTTTTTTTCCCGCTTTTATTAGGGAAGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E543442" ref_strand="+" ref_description="SGN-E543442 [TUS-65-E5](-)">
      <seq>caatttaatcaagttctaaacatagaactggaccagctcattgaggcctgcaattttctagatgagaagtggtcgcccaagtttgttatcattgtgctcagaaaaatcatcatacaaagtttttccagtctggatctcctgataatgttccaccagggacaattatagataacaaagtttgtcatccaaggaacaatgacttctatctgtgcgcccatgctggaatgattggtacgactcgacctacacattaccatgtgttgttggatgaagttggtttctcacctgatgaacttcaagaacttgttcataatctgtcctatgtgtaccaaagaagcactactgctatatccattgtggctccgataagttatgcccatttggccgccacacaggtgggtcaatggatgaaattcgaggatgcatcagagacatcgtcaagccatggtggtctgactaatgctggtccagttactgttcctcaattgccccgtcttcaggagaacgttgctagctccatgttcttctgttgaggcctgtgcaccacctcctgttttactctacgcggttaatgtatgctctagacaaatggtttctgtaaatagctctagtttgacagcacttggagtacgaaccttgtcctagtgacctcccaaaaacaacttagttatgcggtacaatactaggtctgttgccatattcaggtctcatgcatatttttcgcgcttctgttctcctgaacaattttgctatgtatctgtaaaatgcatagagattaacctggtggtgtgactatgcatcaattatgcttttttatatgtaaatggtaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="104878" stop="103000"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104578" g_stop="104534" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="45" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104445" g_stop="104334" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="46" r_stop="156" r_length="111" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104333" i_stop="104258" i_length="76">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104257" g_stop="104184" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="230" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104091" g_stop="103997" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="325" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103">
            <donor d_prob="0.827" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="103893" g_stop="103862" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="357" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="103779" g_stop="103298" g_length="482"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="839" r_length="482" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E543442" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>840</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E543442" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104578" e_stop="104534"/>
          <exon e_start="104445" e_stop="104334"/>
          <exon e_start="104257" e_stop="104184"/>
          <exon e_start="104091" e_stop="103997"/>
          <exon e_start="103893" e_stop="103862"/>
          <exon e_start="103779" e_stop="103298"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAGGTTCTGCACTCCGATAAATGCTGTCTTAATATATAATTTGGATAATACTAGAGATTCTCGTGCTAACACATCTGTTCTATCCATGTAGGCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAGGTAATAATAGAAGTCGCAGCGAATTATAGTTGTAACGAAAGCACTGGATCAATTCGTTTACACAGATTTTTTGCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGTGTAAGTATTGCATAAATTGGATTCTTCGAAGCTGGCCCGAGTTTTGAACTTTTAAATCATAGCAGTTGCAGTCAATTCTAATTATTATACACACTTCTTGCAGGTACCAAAGAAGCACTACTGCTATATCCATTGGTAAATATAAGCATATTTGTACAAGTGCTGTTATATTTTCCTTCAGCTTGTGCCCTCACTTCCTTTTCCACATTATATGCAGTGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAACAACTTAGTTATGCGGTACAATACTAGGTCTGTTGCCATATTCAGGTCTCATGCATATTTTTCGCGCTTCTGTTCTCCTGAACAATTTTGCTATGTATCTGTAAAATGCATAGAGATTAACCTGGTGGTGTGACTATGCATCAATTATGCTTTTTTATATGTAAATGGTAATATATAACT</genome_strand>
        <mrna_strand>CAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAG........................................................................................GCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTG-TGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAG............................................................................GGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATT............................................................................................GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT.......................................................................................................GTACCAAAGAAGCACTACTGCTATATCCATTG..................................................................................TGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAACAACTTAGTTATGCGGTACAATACTAGGTCTGTTGCCATATTCAGGTCTCATGCATATTTTTCGCGCTTCTGTTCTCCTGAACAATTTTGCTATGTATCTGTAAAATGCATAGAGATTAACCTGGTGGTGTGACTATGCATCAATTATGCTTTTTTATATGTAAATGGTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E696186" ref_strand="+" ref_description="SGN-E696186 [LH_Ea08H16](-)">
      <seq>atgaaaagtggtcgcccaagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtctggatctcctgataatgttccaccagggacaattatagataacaaagtttgtcatccaaggaacaatgacttctatctgtgtgcccatgctggaatgattggtacgactcgacctacacattaccatgtgttgttggatgaagttggtttctcacctgatgaacttcaagaacttgtgcataatctgtcctatgtgtaccaaagaagcactactgctatatccattgtggctccgataagttatgcccatttggccgccacacaggtgggtcaatggatgaaattcgaggatgcatcagagacatcgtcaagccatggtggtcttactaatgctggtccagttactgttcctcaattgccccgtcttcaggagaacgttgctagctccatgttcttctgttgaggcctgtgcgcctcctgttttactctacgcggttaatgtatgctctagacaaatggtttctgtaaatagctttagtacgatccttgtcctagtgacctcccaaaacttgttagttattcggtacaatacctaggtctgttcccatactcaggtctcatgcatatttttcgcgcttctgttctccggaacaattttgctatgtatctgtaaaatgcatagagattaacctggtggtgtgactatgcatcaattgtgcttttttatatgtaaatggtaatgctggaatctttgttgtaccctattgaaaaaaaatatgtagaacttttttttcccaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="104729" stop="103006"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104429" g_stop="104334" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104333" i_stop="104258" i_length="76">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104257" g_stop="104184" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="170" r_length="74" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="0.98"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104091" g_stop="103997" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="265" r_length="95" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103">
            <donor d_prob="0.827" d_score="0.98"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103893" g_stop="103862" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="297" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="103779" g_stop="103306" g_length="474"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="751" r_length="454" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="807" polyA_stop="821"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E696186" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>771</cumulative_length_of_scored_exons>
        <coverage percentage="0.939" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E696186" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104429" e_stop="104334"/>
          <exon e_start="104257" e_stop="104184"/>
          <exon e_start="104091" e_stop="103997"/>
          <exon e_start="103893" e_stop="103862"/>
          <exon e_start="103779" e_stop="103306"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAGGTAATAATAGAAGTCGCAGCGAATTATAGTTGTAACGAAAGCACTGGATCAATTCGTTTACACAGATTTTTTGCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGTGTAAGTATTGCATAAATTGGATTCTTCGAAGCTGGCCCGAGTTTTGAACTTTTAAATCATAGCAGTTGCAGTCAATTCTAATTATTATACACACTTCTTGCAGGTACCAAAGAAGCACTACTGCTATATCCATTGGTAAATATAAGCATATTTGTACAAGTGCTGTTATATTTTCCTTCAGCTTGTGCCCTCACTTCCTTTTCCACATTATATGCAGTGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAACAACTTAGTTATGCGGTACAATA-CTAGGTCTGTTGCCATATTCAGGTCTCATGCATATTTTTCGCGCTTCTGTTCTCCTGAACAATTTTGCTATGTATCTGTAAAATGCATAGAGATTAACCTGGTGGTGTGACTATGCATCAATTATGCTTTTTTATATGTAAATGGTAAT</genome_strand>
        <mrna_strand>ATGAAAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAG............................................................................GGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGTGCCCATGCTGGAATGATT............................................................................................GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTGCATAATCTGTCCTATGT.......................................................................................................GTACCAAAGAAGCACTACTGCTATATCCATTG..................................................................................TGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTTACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTG---CGCCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAG--C-----T--------TT--AGTACGATCCTTGTCCTAGTGACCTCCC-AAAACTTGTTAGTTATTCGGTACAATACCTAGGTCTGTTCCCATACTCAGGTCTCATGCATATTTTTCGCGCTTCTGTTCTCCGGAACAATTTTGCTATGTATCTGTAAAATGCATAGAGATTAACCTGGTGGTGTGACTATGCATCAATTGTGCTTTTTTATATGTAAATGGTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E593165" ref_strand="+" ref_description="SGN-E593165 [36389]">
      <seq>agaagcacaactgctatatccattgtggctccgataagttatgcccatttggctgccacacaagtgggacaatggatgaaattcgaggatgcatcagagacatcgtcaagccatggtggtctgacaaatgctggtccagttactgttcctcagttgccccgtcttcaagagaatgttgctagctccatgttcttctgttgaggcctgtgcgcctcctgttttactgtacgcggttaatgtatgctgtagacgaatggtttctgtaaatagctctagtttaacagcacttggagtctgaaccttgtccgagtgacctcccaaaactccttagttttattcggtacaatattaggtctgttgccctattcaggtctcccatgcatcgttttcgcgcttctgttcctcggaacaattttgctatgtatctgttaaatgcatagggattaacctggtggttgtgacaatgcaacaattatgcttttttatatgtaaatggcaacgctggaatctttgtaggattttaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="104186" stop="103007"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103886" g_stop="103862" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103779" g_stop="103311" g_length="469"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="495" r_length="470" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E593165" ref_strand="+">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>494</cumulative_length_of_scored_exons>
        <coverage percentage="0.936" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E593165" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103886" e_stop="103862"/>
          <exon e_start="103779" e_stop="103311"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGCACTACTGCTATATCCATTGGTAAATATAAGCATATTTGTACAAGTGCTGTTATATTTTCCTTCAGCTTGTGCCCTCACTTCCTTTTCCACATTATATGCAGTGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAACAACTTAG--TTATGCGGTACAATACTAGGTCTGTTGCCATATTCAGGTCT--CATGCATATTTTTCGCGCTTCTGTTCTCCTGAACAATTTTGCTATGTATCTGTAAAATGCATAGAGATTAACCTGGTGG-TGTGACTATGCATCAATTATGCTTTTTTATATGTAAATG</genome_strand>
        <mrna_strand>AGAAGCACAACTGCTATATCCATTG..................................................................................TGGCTCCGATAAGTTATGCCCATTTGGCTGCCACACAAGTGGGACAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACAAATGCTGGTCCAGTTACTGTTCCTCAGTTGCCCCGTCTTCAAGAGAATGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTG---CGCCTCCTGTTTTACTGTACGCGGTTAATGTATGCTGTAGACGAATGGTTTCTGTAAATAGCTCTAGTTTAACAGCACTTGGAGTCTGAACCTTGTCCGAGTGACCTCCC-AAAACTCCTTAGTTTTATTCGGTACAATATTAGGTCTGTTGCCCTATTCAGGTCTCCCATGCATCGTTTTCGCGCTTCTGTTCCTCGGAACAATTTTGCTATGTATCTGTTAAATGCATAGGGATTAACCTGGTGGTTGTGACAATGCAACAATTATGCTTTTTTATATGTAAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369981" ref_strand="+" ref_description="SGN-E369981 [TUS-26-L15]">
      <seq>aagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtctggatctcctgataatgttccaccagggacaattatagataacaaagtttgtcatccaaggaacaatgacttctatctgtgcgcccatgctggaatgattggtacgactcgacctacacattaccatgtgttgttggatgaagttggtttctcacctgatgaacttcaagaacttgttcataatctgtcctatgtgtaccaaagaagcactactgctatatccattgtggctccgataagttatgcccatttggccgccacacaggtgggtcaatggatgaaattcgaggatgcatcagagacatcgtcaagccatggtggtctgactaatgctggtccagttactgttcctcaattgccccgtcttcaggagaacgttgctagctccatgttcttctgttgaggcctgtgcaccacctcctgttttactctacgcggttaatgtatgctctagacaaatggtttctgtaaatagctctagtttgacagcacttggagtacgaaccttgtcctagtgacctcccaaaaacaacttagttatgcggtacaatactaggtctgttgccatattcaggtctcatgcatatttttcgcgcttctgttctcctgaacaattttgctatgtatctgtaaaatgcatagagattaacctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="104712" stop="103053"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104412" g_stop="104334" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104333" i_stop="104258" i_length="76">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104257" g_stop="104184" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="153" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104091" g_stop="103997" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="248" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103">
            <donor d_prob="0.827" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103893" g_stop="103862" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="280" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="103779" g_stop="103353" g_length="427"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="707" r_length="427" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E369981" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>707</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E369981" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104412" e_stop="104334"/>
          <exon e_start="104257" e_stop="104184"/>
          <exon e_start="104091" e_stop="103997"/>
          <exon e_start="103893" e_stop="103862"/>
          <exon e_start="103779" e_stop="103353"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAGGTAATAATAGAAGTCGCAGCGAATTATAGTTGTAACGAAAGCACTGGATCAATTCGTTTACACAGATTTTTTGCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGTGTAAGTATTGCATAAATTGGATTCTTCGAAGCTGGCCCGAGTTTTGAACTTTTAAATCATAGCAGTTGCAGTCAATTCTAATTATTATACACACTTCTTGCAGGTACCAAAGAAGCACTACTGCTATATCCATTGGTAAATATAAGCATATTTGTACAAGTGCTGTTATATTTTCCTTCAGCTTGTGCCCTCACTTCCTTTTCCACATTATATGCAGTGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAACAACTTAGTTATGCGGTACAATACTAGGTCTGTTGCCATATTCAGGTCTCATGCATATTTTTCGCGCTTCTGTTCTCCTGAACAATTTTGCTATGTATCTGTAAAATGCATAGAGATTAACCTGG</genome_strand>
        <mrna_strand>AAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAG............................................................................GGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATT............................................................................................GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT.......................................................................................................GTACCAAAGAAGCACTACTGCTATATCCATTG..................................................................................TGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAACAACTTAGTTATGCGGTACAATACTAGGTCTGTTGCCATATTCAGGTCTCATGCATATTTTTCGCGCTTCTGTTCTCCTGAACAATTTTGCTATGTATCTGTAAAATGCATAGAGATTAACCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E325381" ref_strand="+" ref_description="SGN-E325381 [cTOC-1-K3]">
      <seq>acaaagtttgtcatccaaggaacaatgacttctatctgtgcgcccatgctggaatgattggtacgactcgacctacacattaccatgtgttgttggatgaagttggtttctcacctgatgaacttcaagaacttgttcataatctgtcctatgtgtaccaaagaagcactactgctatatccattgtggctccgataagttatgcccatttggccgccacacaggtgggtcaatggatgaaattcgaggatgcatcagagacatcgtcaagccatggtggtctgactaatgctggtccagttactgttcctcaattgccccgtcttcaggagaacgttgctagctccatgttcttctgttgaggcctgtgcaccacctcctgttttactctacgcggttaatgtatgctctagacaaatggtttctgtaaatagctctagtttgacagcacttggagtacgaaccttgtcctagtgacctcccaaaaacaacttagttatgcggtacaatactaggtctgttgccatattcaggtctcatgcatatttttcgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="104542" stop="103113"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104242" g_stop="104184" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104091" g_stop="103997" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="154" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103">
            <donor d_prob="0.827" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103893" g_stop="103862" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="186" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103779" g_stop="103413" g_length="367"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="553" r_length="367" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E325381" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E325381" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104242" e_stop="104184"/>
          <exon e_start="104091" e_stop="103997"/>
          <exon e_start="103893" e_stop="103862"/>
          <exon e_start="103779" e_stop="103413"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGTGTAAGTATTGCATAAATTGGATTCTTCGAAGCTGGCCCGAGTTTTGAACTTTTAAATCATAGCAGTTGCAGTCAATTCTAATTATTATACACACTTCTTGCAGGTACCAAAGAAGCACTACTGCTATATCCATTGGTAAATATAAGCATATTTGTACAAGTGCTGTTATATTTTCCTTCAGCTTGTGCCCTCACTTCCTTTTCCACATTATATGCAGTGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAACAACTTAGTTATGCGGTACAATACTAGGTCTGTTGCCATATTCAGGTCTCATGCATATTTTTCGC</genome_strand>
        <mrna_strand>ACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATT............................................................................................GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT.......................................................................................................GTACCAAAGAAGCACTACTGCTATATCCATTG..................................................................................TGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAACAACTTAGTTATGCGGTACAATACTAGGTCTGTTGCCATATTCAGGTCTCATGCATATTTTTCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E245512" ref_strand="+" ref_description="SGN-E245512 [cLEF-43-N19]">
      <seq>agttggtttctcacctgatgaacttcaagaacttgttcataatctgtcctatgtgtaccaaagaagcactactgctatatncattgtgggttcgttnagttatggccatttgggcgccacacaggtgggtcaatggatgaaattcgaggatgcatcagagacatcgtcaagccatggtggtctgactaatgctggtccagttactgttcctcaattgccccgtcttcaggagaacgttgctagctccatgttcttctgttgaggcctgtgcaccacctcctgttttactctacgcggttaatgtatgctctagacaaatggtttctgtaaatagctctagtttgacagcacttggagtacgaaccttgtcctagtgacctcccaaaaacaacttagttatgcggtacaatactaggtctgttgccatattcaggtctcatgcatatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="104350" stop="103117"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104050" g_stop="103997" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103">
            <donor d_prob="0.827" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103893" g_stop="103862" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="86" r_length="32" r_score="0.969"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103779" g_stop="103417" g_length="363"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="449" r_length="363" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E245512" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>449</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245512" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104050" e_stop="103997"/>
          <exon e_start="103893" e_stop="103862"/>
          <exon e_start="103779" e_stop="103417"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGTGTAAGTATTGCATAAATTGGATTCTTCGAAGCTGGCCCGAGTTTTGAACTTTTAAATCATAGCAGTTGCAGTCAATTCTAATTATTATACACACTTCTTGCAGGTACCAAAGAAGCACTACTGCTATATCCATTGGTAAATATAAGCATATTTGTACAAGTGCTGTTATATTTTCCTTCAGCTTGTGCCCTCACTTCCTTTTCCACATTATATGCAGTGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAACAACTTAGTTATGCGGTACAATACTAGGTCTGTTGCCATATTCAGGTCTCATGCATATTTT</genome_strand>
        <mrna_strand>AGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT.......................................................................................................GTACCAAAGAAGCACTACTGCTATATNCATTG..................................................................................TGGGTTCGTTNAGTTATGGCCATTTGGGCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAACAACTTAGTTATGCGGTACAATACTAGGTCTGTTGCCATATTCAGGTCTCATGCATATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E605855" ref_strand="+" ref_description="SGN-E605855 [21786]">
      <seq>caaagaagcactactgctatatccattgtggctccgantaatttatgcccatttggctgccacacaggtgggacaatggatgaaattcgaggacgcatcagagacatcgtcaagccatggtggtctgacaaatgctggtccagttactgttcctcagttgccccgtcttcaagagaatgttgctagctccatgttcttctgttgaggcctgtgcgcctcctgttttactgtacgcggttaatgtatgctttagatgtatggtttctgtaaatagctctagtttaacagcacttggagtctgaaccttgtccgagtgacctcccaaaactccttagttattcggtacaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="104189" stop="103155"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103889" g_stop="103862" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="28" r_length="28" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103779" g_stop="103451" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="354" r_length="326" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="355" polyA_stop="366"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E605855" ref_strand="+">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>357</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E605855" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103889" e_stop="103862"/>
          <exon e_start="103779" e_stop="103451"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGAAGCACTACTGCTATATCCATTGGTAAATATAAGCATATTTGTACAAGTGCTGTTATATTTTCCTTCAGCTTGTGCCCTCACTTCCTTTTCCACATTATATGCAGTGGCTCCGA-TAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAACAACTTAGTTATGCGGTACAATACTAG</genome_strand>
        <mrna_strand>CAAAGAAGCACTACTGCTATATCCATTG..................................................................................TGGCTCCGANTAATTTATGCCCATTTGGCTGCCACACAGGTGGGACAATGGATGAAATTCGAGGACGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACAAATGCTGGTCCAGTTACTGTTCCTCAGTTGCCCCGTCTTCAAGAGAATGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTG---CGCCTCCTGTTTTACTGTACGCGGTTAATGTATGCTTTAGATGTATGGTTTCTGTAAATAGCTCTAGTTTAACAGCACTTGGAGTCTGAACCTTGTCCGAGTGACCTCCC-AAAACTCCTTAGTTATTCGGTACAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E608098" ref_strand="+" ref_description="SGN-E608098 [24077]">
      <seq>ggtcgcccaagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtctggatctcccgataatgttccaccagggacaattatagataacaaagtttgtcatccaaggaacaatgacttctatctgtgtgcccacgcgggaatgattggtacgactcgacctacacattaccatgtgttgttggatgaagttggtttctcacctgatgaacttcaagaacttgttcataatctgtcctatgtgtaccaaagaagcactactgctatatccattgtggctccgataagttatgcccatttggctgccacacaggtgggacaatggatgaaattcgaggacgcatcagagacatcgtcaagccatggtggtctgacaaatgctggtccagttactgttcctcagttgccccgtcttcaagagaatgttgctagctccatgttcttctgttgaggcctgtgcgcttcctgttttactgtacgcggttaatgtatgctgtagacgaatggtttctgtaaatagctctaggtttaacagcacttggagtctgaaccttgtccagtggacctcccaaaagtccttagtttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="104720" stop="103179"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104420" g_stop="104334" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="87" r_length="87" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104333" i_stop="104258" i_length="76">
            <donor d_prob="0.900" d_score="0.98"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104257" g_stop="104184" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="161" r_length="74" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="0.94"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104091" g_stop="103997" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="256" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103">
            <donor d_prob="0.827" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103893" g_stop="103862" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="288" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="103779" g_stop="103466" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="599" r_length="311" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E608098" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E608098" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104420" e_stop="104334"/>
          <exon e_start="104257" e_stop="104184"/>
          <exon e_start="104091" e_stop="103997"/>
          <exon e_start="103893" e_stop="103862"/>
          <exon e_start="103779" e_stop="103466"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAGGTAATAATAGAAGTCGCAGCGAATTATAGTTGTAACGAAAGCACTGGATCAATTCGTTTACACAGATTTTTTGCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGTGTAAGTATTGCATAAATTGGATTCTTCGAAGCTGGCCCGAGTTTTGAACTTTTAAATCATAGCAGTTGCAGTCAATTCTAATTATTATACACACTTCTTGCAGGTACCAAAGAAGCACTACTGCTATATCCATTGGTAAATATAAGCATATTTGTACAAGTGCTGTTATATTTTCCTTCAGCTTGTGCCCTCACTTCCTTTTCCACATTATATGCAGTGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTA-GTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAACAACTTAGTTAT</genome_strand>
        <mrna_strand>GGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCCGATAATGTTCCACCAG............................................................................GGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGTGCCCACGCGGGAATGATT............................................................................................GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT.......................................................................................................GTACCAAAGAAGCACTACTGCTATATCCATTG..................................................................................TGGCTCCGATAAGTTATGCCCATTTGGCTGCCACACAGGTGGGACAATGGATGAAATTCGAGGACGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACAAATGCTGGTCCAGTTACTGTTCCTCAGTTGCCCCGTCTTCAAGAGAATGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTG---CGCTTCCTGTTTTACTGTACGCGGTTAATGTATGCTGTAGACGAATGGTTTCTGTAAATAGCTCTAGGTTTAACAGCACTTGGAGTCTGAACCTTGTCCAGTGGACCTCCC-AAAAGTCCTTAGTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E698675" ref_strand="+" ref_description="SGN-E698675 [FA07AH11]">
      <seq>cacgtttaaaaaagtttcagacactgatgatgatgggattatgcagggaacttttgctagatttttatgtgagttccgggaaaaggaagcctgagcacattatagtattcagggatggtgtcagtgaatctcaatttaatcaagttctaaacatagaactggaccagctcattgaggcctgcaattttctagatgagaagtggtcgcccaagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtctggatctcctgataatgttccaccagggacaattatagataacaaagtttgtcatccaaggaacaatgacttctatctgtgcgcccatgctggaatgattggtacgactcgacctacacattaccatgtgttgttggatgaagttggtttctcacctgatgaacttcaagaacttgttcataatctgtcctatgtgtaccaaagaagcactactgctatatccattgtggctccgataagttatgcccatttggccgccacacaggtgggtcaatggatgaaattcgaggatgcatcagagacatcgtcaagccatggtggtctgactaatgctggtccagttactgttcctcaattgccccgtcttcaggagaacgttgctagctccatgttcttctgttgaggcctgtgcaccacctcctgttttactctacgcggttaatgtatgctctagacaaatggtttctgtaaatagctctagtttgacagcacttggagtaccaaccttgtcctagtgacctcccaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="105917" stop="103177"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105617" g_stop="105573" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="0.911"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533">
            <donor d_prob="0.996" d_score="0.91"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="105039" g_stop="104974" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="112" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104973" i_stop="104598" i_length="376">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104597" g_stop="104534" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="176" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104445" g_stop="104334" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="288" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="104333" i_stop="104258" i_length="76">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="104257" g_stop="104184" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="362" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="104091" g_stop="103997" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="457" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103">
            <donor d_prob="0.827" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="103893" g_stop="103862" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="489" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="103779" g_stop="103477" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="792" r_length="303" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E698675" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>791</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E698675" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105617" e_stop="105573"/>
          <exon e_start="105039" e_stop="104974"/>
          <exon e_start="104597" e_stop="104534"/>
          <exon e_start="104445" e_stop="104334"/>
          <exon e_start="104257" e_stop="104184"/>
          <exon e_start="104091" e_stop="103997"/>
          <exon e_start="103893" e_stop="103862"/>
          <exon e_start="103779" e_stop="103477"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATG-AGGTGAGTTTGGTTTTTGTAGGTTTAACTTTATCTTGGATTGTTTTCTATTGGGTCAGGGTGAATTAACATTGGCCGTTCAGAACTTAATCTTATATGATAGAGTATGCTATGCTTTCTAACATATACATTTTGATCTTTGAGTCGCTTTAGCTGCACTGGAGATGAATTTATTTTTGTGGTGATATTTACATTTTGCATTTCGACTCTTGAGGGAGTTGCTTCACCAGAATTGTGATGCCTTAATACTTTGTTAGTATGGATTGAGTTTCTTCATGCCGAATGAGCTCCTCACTCAAATACCACTGGTTCCGTGATTTTCTGTATAATCCATACCCAGCTGTATTGCACATCTTTCTAATCAGTATATTATGCATTTTAAAGTTCGTTTTCTCTTTCCAATGGTTTGCTGCTATTTCTTATGGTTTAAAACTAATAGCCTAATGGTTTGCGGGTTACTTTTACAATTCTGTTGGTGGTATCCTTTTGGTTTCCCAGAATTAACTTGCTGATAATACTTAACCTTTATAATGCAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAGGTTCTGCACTCCGATAAATGCTGTCTTAATATATAATTTGGATAATACTAGAGATTCTCGTGCTAACACATCTGTTCTATCCATGTAGGCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAGGTAATAATAGAAGTCGCAGCGAATTATAGTTGTAACGAAAGCACTGGATCAATTCGTTTACACAGATTTTTTGCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGTGTAAGTATTGCATAAATTGGATTCTTCGAAGCTGGCCCGAGTTTTGAACTTTTAAATCATAGCAGTTGCAGTCAATTCTAATTATTATACACACTTCTTGCAGGTACCAAAGAAGCACTACTGCTATATCCATTGGTAAATATAAGCATATTTGTACAAGTGCTGTTATATTTTCCTTCAGCTTGTGCCCTCACTTCCTTTTCCACATTATATGCAGTGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAAC</genome_strand>
        <mrna_strand>CACGTTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAG........................................................................................................................................................................................................................................................................................................................................................................................GGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAG........................................................................................GCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAG............................................................................GGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATT............................................................................................GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT.......................................................................................................GTACCAAAGAAGCACTACTGCTATATCCATTG..................................................................................TGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACCAACCTTGTCCTAGTGACCTCCCAAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E482980" ref_strand="+" ref_description="SGN-E482980 [cSTE-6-D6]">
      <seq>tttttatgtgagttccgggaaaaggaagcctgagcacattatagtattcagggatggtgtcagtgaatctcaatttaatcaagttctaaacatagaactggaccagctcattgaggcctgcaagtttctagatgaaaagtggtcgcccaagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtctggatctcccgataatgttccaccagggacaattatagataacaaagtttgtcatccaaggaacaatgacttctatctgtgtgcccacgcgggaatgattggtacgactcgacctacacattaccatgtgttgttggatgaagttggtttctcacctgatgaacttcaagaacttgttcataatctgtcctatgtgtaccaaagaagcactactgctatatccattgtggctccgataagttatgcccatttggctgccacacaggtgggacaatggatgaaattcgaggacgcatcagagacatcgtcaagccatgggtggtctgacaaatgctggtccagttactgttcctcagttgccccgtcttcaagagaatgttgctagctccatgttcttctgttgaggcctgtgcgctttctgttttactgtacgcggttaatgtatgctgtagacgaatggttttctgtaatagctctagtttacagcacttggagtctgaaccttgtccagtgacctcccaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="105324" stop="103181"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105024" g_stop="104974" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104973" i_stop="104598" i_length="376">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104597" g_stop="104534" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="115" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104445" g_stop="104334" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="227" r_length="112" r_score="0.973"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104333" i_stop="104258" i_length="76">
            <donor d_prob="0.900" d_score="0.98"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104257" g_stop="104184" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="301" r_length="74" r_score="0.959"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="0.94"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="104091" g_stop="103997" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="396" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103">
            <donor d_prob="0.827" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="103893" g_stop="103862" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="428" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="103779" g_stop="103481" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="723" r_length="295" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E482980" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>727</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E482980" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105024" e_stop="104974"/>
          <exon e_start="104597" e_stop="104534"/>
          <exon e_start="104445" e_stop="104334"/>
          <exon e_start="104257" e_stop="104184"/>
          <exon e_start="104091" e_stop="103997"/>
          <exon e_start="103893" e_stop="103862"/>
          <exon e_start="103779" e_stop="103481"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAGGTTCTGCACTCCGATAAATGCTGTCTTAATATATAATTTGGATAATACTAGAGATTCTCGTGCTAACACATCTGTTCTATCCATGTAGGCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAGGTAATAATAGAAGTCGCAGCGAATTATAGTTGTAACGAAAGCACTGGATCAATTCGTTTACACAGATTTTTTGCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGTGTAAGTATTGCATAAATTGGATTCTTCGAAGCTGGCCCGAGTTTTGAACTTTTAAATCATAGCAGTTGCAGTCAATTCTAATTATTATACACACTTCTTGCAGGTACCAAAGAAGCACTACTGCTATATCCATTGGTAAATATAAGCATATTTGTACAAGTGCTGTTATATTTTCCTTCAGCTTGTGCCCTCACTTCCTTTTCCACATTATATGCAGTGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCAT-GGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGG-TTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAA</genome_strand>
        <mrna_strand>TTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAG........................................................................................................................................................................................................................................................................................................................................................................................GGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAG........................................................................................GCCTGCAAGTTTCTAGATGAAAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCCGATAATGTTCCACCAG............................................................................GGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGTGCCCACGCGGGAATGATT............................................................................................GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT.......................................................................................................GTACCAAAGAAGCACTACTGCTATATCCATTG..................................................................................TGGCTCCGATAAGTTATGCCCATTTGGCTGCCACACAGGTGGGACAATGGATGAAATTCGAGGACGCATCAGAGACATCGTCAAGCCATGGGTGGTCTGACAAATGCTGGTCCAGTTACTGTTCCTCAGTTGCCCCGTCTTCAAGAGAATGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTG---CGCTTTCTGTTTTACTGTACGCGGTTAATGTATGCTGTAGACGAATGGTTTTCTGT-AATAGCTCTAGTTT-ACAGCACTTGGAGTCTGAACCTTGTCC-AGTGACCTCCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E356539" ref_strand="+" ref_description="SGN-E356539 [cTOS-21-A20]">
      <seq>cacattatagtattcagggatggtgtcagtgaatctcaatttaatcaagttctaaacatagaactggaccagctcattgaggcctgcaattttctagatgagaagtggtcgcccaagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtctggatctcctgataatgttccaccagattttttgcagggacaattatagataacaaagtttgtcatccaaggaacaatgacttctatctgtgcgcccatgctggaatgattggtacgactcgacctacacattaccatgtgttgttggatgaagttggtttctcacctgatgaacttcaagaacttgttcataatctgtcctatgtgtaccaaagaagcactactgctatatccattgtggctccgataagttatgcccatttggccgccacacaggtgggtcaatggatgaaattcgaggatgcatcagagacatcgtcaagccatggtggtctgactaatgctggtccagttactgttcctcaattgccccgtcttcaggagaacgttgctagctccatgttcttctgttgaggcctgtgcaccacctcctgttttactctacgcggataatgtatgctctagacaaatggtttctgtaaatagctctagtttgacagcacttggagta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="104916" stop="103207"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104597" g_stop="104534" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="81" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104445" g_stop="104334" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="193" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104333" i_stop="104269" i_length="65">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.358" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104268" g_stop="104184" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="278" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104091" g_stop="103997" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="373" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103">
            <donor d_prob="0.827" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="103893" g_stop="103862" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="405" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="103779" g_stop="103507" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="678" r_length="273" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E356539" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E356539" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104597" e_stop="104534"/>
          <exon e_start="104445" e_stop="104334"/>
          <exon e_start="104268" e_stop="104184"/>
          <exon e_start="104091" e_stop="103997"/>
          <exon e_start="103893" e_stop="103862"/>
          <exon e_start="103779" e_stop="103507"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAGGTTCTGCACTCCGATAAATGCTGTCTTAATATATAATTTGGATAATACTAGAGATTCTCGTGCTAACACATCTGTTCTATCCATGTAGGCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAGGTAATAATAGAAGTCGCAGCGAATTATAGTTGTAACGAAAGCACTGGATCAATTCGTTTACACAGATTTTTTGCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGTGTAAGTATTGCATAAATTGGATTCTTCGAAGCTGGCCCGAGTTTTGAACTTTTAAATCATAGCAGTTGCAGTCAATTCTAATTATTATACACACTTCTTGCAGGTACCAAAGAAGCACTACTGCTATATCCATTGGTAAATATAAGCATATTTGTACAAGTGCTGTTATATTTTCCTTCAGCTTGTGCCCTCACTTCCTTTTCCACATTATATGCAGTGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTA</genome_strand>
        <mrna_strand>GGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAG........................................................................................GCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAG.................................................................ATTTTTTGCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATT............................................................................................GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT.......................................................................................................GTACCAAAGAAGCACTACTGCTATATCCATTG..................................................................................TGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGATAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E259504" ref_strand="+" ref_description="SGN-E259504 [cLEG-42-I10]">
      <seq>aagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtctggatctcctgataatgttccaccagggaccaattatagataacaaagtttgtcatccaaggaacaatgacttctatctgtgcgcccatgcctggaatgattggtacgactcgacctacacattaccatgtgttgttggatgaagttggtttctcacctgatgaacttcaagaacttgttcataatctgtcctatgtgtaccaaagaagcacctactgctatatccattgtggctccgataagttatgcccatttggccgccacaccaggtgggtcaatggatgaaattcgaggatgcatcagagaccatcgtcaagccatggtggtctgacctaatgctggtccagttacctgttcctcaattgccccgtcttcaggagaaccgttgctagctccatgttcttctgttgaggcctgtgccccacctcctgttttactctacgcggttaatgtatgctctagacaaatggtttctgtaaatagctctagtttgacagcacttggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="104712" stop="103209"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104412" g_stop="104334" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104333" i_stop="104258" i_length="76">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104257" g_stop="104184" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="155" r_length="76" r_score="0.946"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="0.96"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104091" g_stop="103997" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="250" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103">
            <donor d_prob="0.827" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103893" g_stop="103862" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="283" r_length="33" r_score="0.938"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="103779" g_stop="103509" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="559" r_length="276" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E259504" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E259504" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104412" e_stop="104334"/>
          <exon e_start="104257" e_stop="104184"/>
          <exon e_start="104091" e_stop="103997"/>
          <exon e_start="103893" e_stop="103862"/>
          <exon e_start="103779" e_stop="103509"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAGGTAATAATAGAAGTCGCAGCGAATTATAGTTGTAACGAAAGCACTGGATCAATTCGTTTACACAGATTTTTTGCAGGGA-CAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATG-CTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGTGTAAGTATTGCATAAATTGGATTCTTCGAAGCTGGCCCGAGTTTTGAACTTTTAAATCATAGCAGTTGCAGTCAATTCTAATTATTATACACACTTCTTGCAGGTACCAAAGAAGCA-CTACTGCTATATCCATTGGTAAATATAAGCATATTTGTACAAGTGCTGTTATATTTTCCTTCAGCTTGTGCCCTCACTTCCTTTTCCACATTATATGCAGTGGCTCCGATAAGTTATGCCCATTTGGCCGCCACA-CAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGA-CATCGTCAAGCCATGGTGGTCTGA-CTAATGCTGGTCCAGTTA-CTGTTCCTCAATTGCCCCGTCTTCAGGAGAA-CGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAG</genome_strand>
        <mrna_strand>AAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAG............................................................................GGACCAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCCTGGAATGATT............................................................................................GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT.......................................................................................................GTACCAAAGAAGCACCTACTGCTATATCCATTG..................................................................................TGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACCAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACCATCGTCAAGCCATGGTGGTCTGACCTAATGCTGGTCCAGTTACCTGTTCCTCAATTGCCCCGTCTTCAGGAGAACCGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCCCCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E259622" ref_strand="+" ref_description="SGN-E259622 [cLEG-42-I11]">
      <seq>aagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtctggatctcctgataatgttccaccagggacaattatagataacaaagtttgtcatccaaggaacaatgacttctatctgtgcgcccatgctggaatgattggtacgactcgacctacacattaccatgtgttgttggatgaagttggtttctcacctgatgaacttcaagaacttgttcataatctgtcctatgtgtaccaaagaagcactactgctatatccattgtggctccgataagttatgcccatttggccgccacacaggtgggtcaatggatgaaattcgaggatgcatcagagacatcgtcaagccatggtggtctgactaatgctggtccagttactgttcctcaattgccccgtcttcaggagaacgttgctagctccatgttcttctgttgaggcctgtgcaccacctcctgttttactctacgcggttaatgtatgctctagacaaatggtttctgtaaatagctctagtttgacagcacttggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="104712" stop="103209"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104412" g_stop="104334" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104333" i_stop="104258" i_length="76">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104257" g_stop="104184" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="153" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104091" g_stop="103997" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="248" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103">
            <donor d_prob="0.827" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103893" g_stop="103862" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="280" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="103779" g_stop="103509" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="551" r_length="271" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E259622" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E259622" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104412" e_stop="104334"/>
          <exon e_start="104257" e_stop="104184"/>
          <exon e_start="104091" e_stop="103997"/>
          <exon e_start="103893" e_stop="103862"/>
          <exon e_start="103779" e_stop="103509"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAGGTAATAATAGAAGTCGCAGCGAATTATAGTTGTAACGAAAGCACTGGATCAATTCGTTTACACAGATTTTTTGCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGTGTAAGTATTGCATAAATTGGATTCTTCGAAGCTGGCCCGAGTTTTGAACTTTTAAATCATAGCAGTTGCAGTCAATTCTAATTATTATACACACTTCTTGCAGGTACCAAAGAAGCACTACTGCTATATCCATTGGTAAATATAAGCATATTTGTACAAGTGCTGTTATATTTTCCTTCAGCTTGTGCCCTCACTTCCTTTTCCACATTATATGCAGTGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAG</genome_strand>
        <mrna_strand>AAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAG............................................................................GGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATT............................................................................................GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT.......................................................................................................GTACCAAAGAAGCACTACTGCTATATCCATTG..................................................................................TGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E258235" ref_strand="+" ref_description="SGN-E258235 [cLEG-49-F14]">
      <seq>aagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtctggatctcctgataatgttccaccagggacaattatagataacaaagtttgtcatccaaggaacaatgacttctatctgtgcgcccatgctggaatgattggtacgactcgacctacacattaccatgtgttgttggatgaagttggtttctcacctgatgaacttcaagaacttgttcataatctgtcctatgtgtaccaaagaagcactactgctatatccattgtggctccgataagttatgcccatttggccgccacacaggtgggtcaatggatgaaattcgaggatgcatcagagacatcgtcaagccatggtggtctgactaatgctggtccagttactgttcctcaattgccccgtcttcaagagaacgttgctagctccatgttcttctgttgaggcctgtgcaccacctcctgttttactctacgcgggtaatgtatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="104712" stop="103257"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104412" g_stop="104334" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104333" i_stop="104258" i_length="76">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104257" g_stop="104184" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="153" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104091" g_stop="103997" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="248" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103">
            <donor d_prob="0.827" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103893" g_stop="103862" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="280" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="103779" g_stop="103557" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="503" r_length="223" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E258235" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E258235" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104412" e_stop="104334"/>
          <exon e_start="104257" e_stop="104184"/>
          <exon e_start="104091" e_stop="103997"/>
          <exon e_start="103893" e_stop="103862"/>
          <exon e_start="103779" e_stop="103557"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAGGTAATAATAGAAGTCGCAGCGAATTATAGTTGTAACGAAAGCACTGGATCAATTCGTTTACACAGATTTTTTGCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGTGTAAGTATTGCATAAATTGGATTCTTCGAAGCTGGCCCGAGTTTTGAACTTTTAAATCATAGCAGTTGCAGTCAATTCTAATTATTATACACACTTCTTGCAGGTACCAAAGAAGCACTACTGCTATATCCATTGGTAAATATAAGCATATTTGTACAAGTGCTGTTATATTTTCCTTCAGCTTGTGCCCTCACTTCCTTTTCCACATTATATGCAGTGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCT</genome_strand>
        <mrna_strand>AAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAG............................................................................GGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATT............................................................................................GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT.......................................................................................................GTACCAAAGAAGCACTACTGCTATATCCATTG..................................................................................TGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAAGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGGTAATGTATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E736393" ref_strand="+" ref_description="SGN-E736393 [LC05CE03]">
      <seq>tggctctcccggccattctgatgttccatcaattgctgcagttgtgagttcaaggcagtggccgtcaatatctcgttatagagcttcagtgcgcactcaatctcctaaagtggagatgattgataacatatttaaaaaagtttcagacactgatgatgatgggattatgagggaacttttgctagatttttatgtgagttccgggaaaaggaagcctgagcacattatagtattcagggatggtgtcagtgaatctcaatttaatcaagttctaaacatagaactggaccagctcattgaggcctgcaattttctagatgagaagtggtcgcccaagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtctggatctcctgataatgttccaccagggacaattatagataacaaagtttgtcatccaaggaacaatgacttctatctgtgcgcccatgctggaatgattggtacgactcgacctacacattaccatgtgttgttggatgaagttggtttctcacctgatgaacttcaagaacttgttcataatctgtcctatgtgtaccaaagaagcactactgctatatccattgtggctccgataagttatgcccatttggccgccacacaggtgggtcaatggatgaaattcgaggatgcatcagagacatcgtcaagccatggtggtctgactaatgctggtccagttactgttcctcaattgccccgtcttcaggagaacgttgctagctccatgttcttctgttgaggcccgtgcaccacctcctgttttactcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="106121" stop="103274"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105821" g_stop="105782" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="105781" i_stop="105704" i_length="78">
            <donor d_prob="0.865" d_score="0.98"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="105703" g_stop="105573" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="171" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="105039" g_stop="104974" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="237" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104973" i_stop="104598" i_length="376">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104597" g_stop="104534" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="301" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="104445" g_stop="104334" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="413" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="104333" i_stop="104258" i_length="76">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="104257" g_stop="104184" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="487" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="104091" g_stop="103997" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="488" r_stop="582" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103">
            <donor d_prob="0.827" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="103893" g_stop="103862" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="583" r_stop="614" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="103779" g_stop="103574" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="615" r_stop="820" r_length="206" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E736393" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>820</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E736393" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105821" e_stop="105782"/>
          <exon e_start="105703" e_stop="105573"/>
          <exon e_start="105039" e_stop="104974"/>
          <exon e_start="104597" e_stop="104534"/>
          <exon e_start="104445" e_stop="104334"/>
          <exon e_start="104257" e_stop="104184"/>
          <exon e_start="104091" e_stop="103997"/>
          <exon e_start="103893" e_stop="103862"/>
          <exon e_start="103779" e_stop="103574"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCAGTAGGTTCTTTCATTGACGTTGCTTACCTTTATACCCAATTTTTCAAAGAATTTCATTTTATACGATTGCTTTGTCAGGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAGGTGAGTTTGGTTTTTGTAGGTTTAACTTTATCTTGGATTGTTTTCTATTGGGTCAGGGTGAATTAACATTGGCCGTTCAGAACTTAATCTTATATGATAGAGTATGCTATGCTTTCTAACATATACATTTTGATCTTTGAGTCGCTTTAGCTGCACTGGAGATGAATTTATTTTTGTGGTGATATTTACATTTTGCATTTCGACTCTTGAGGGAGTTGCTTCACCAGAATTGTGATGCCTTAATACTTTGTTAGTATGGATTGAGTTTCTTCATGCCGAATGAGCTCCTCACTCAAATACCACTGGTTCCGTGATTTTCTGTATAATCCATACCCAGCTGTATTGCACATCTTTCTAATCAGTATATTATGCATTTTAAAGTTCGTTTTCTCTTTCCAATGGTTTGCTGCTATTTCTTATGGTTTAAAACTAATAGCCTAATGGTTTGCGGGTTACTTTTACAATTCTGTTGGTGGTATCCTTTTGGTTTCCCAGAATTAACTTGCTGATAATACTTAACCTTTATAATGCAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAGGTTCTGCACTCCGATAAATGCTGTCTTAATATATAATTTGGATAATACTAGAGATTCTCGTGCTAACACATCTGTTCTATCCATGTAGGCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAGGTAATAATAGAAGTCGCAGCGAATTATAGTTGTAACGAAAGCACTGGATCAATTCGTTTACACAGATTTTTTGCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGTGTAAGTATTGCATAAATTGGATTCTTCGAAGCTGGCCCGAGTTTTGAACTTTTAAATCATAGCAGTTGCAGTCAATTCTAATTATTATACACACTTCTTGCAGGTACCAAAGAAGCACTACTGCTATATCCATTGGTAAATATAAGCATATTTGTACAAGTGCTGTTATATTTTCCTTCAGCTTGTGCCCTCACTTCCTTTTCCACATTATATGCAGTGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTA</genome_strand>
        <mrna_strand>TGGCTCTCCCGGCCATTCTGATGTTCCATCAATTGCTGCA..............................................................................GTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAG........................................................................................................................................................................................................................................................................................................................................................................................GGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAG........................................................................................GCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAG............................................................................GGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATT............................................................................................GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT.......................................................................................................GTACCAAAGAAGCACTACTGCTATATCCATTG..................................................................................TGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCCGTGCACCACCTCCTGTTTTACTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E736268" ref_strand="+" ref_description="SGN-E736268 [LC05AA03]">
      <seq>tgatcagtatctcacaaaccttctccttaagatcaatgctaagcttggtggtttaaattctatgttagctgcggagatttctccttccatccccatggtatctaaggtccccaccatgattcttggaatggacgtatcacatggctctcccggccagtctgatgttccatcaattgctgcagttgtgagttcaaggcagtggccgtcaatatctcgttatagagcttcagtgcgcactcaatctcctaaagtggagatgattgataacatatttaaaaaagtttcagacactgatgatgatgggattatgagggaacttttgctagatttttatgtgagttccgggaaaaggaagcctgagcacattatagtattcagggatggtgtcagtgaatctcaatttaatcaagttctaaacatagaactggaccagctcattgaggcctgcaattttctagatgagaagtggtcgcccaagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtctggatctcctgataatgttccaccagggacaattatagataacaaagtttgtcatccaaggaacaatgacttctatctgtgcgcccatgctggaatgattggtacgactcgacctacacattaccatgtgttgttggatgaagttggtttctcacctgatgaacttcaagaacttgttcataatctgtcctatgtgtaccaaagaagcactactgctatatccattgtggctccgataagttatgcccatttggccgccacacaggtgggtcaatggatgaaattcgaggatgcatcagagacatcgtcaagccatggtggtctgactaatgctggtccagttactgttcctcaattgccccgtcttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="106365" stop="103338"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106065" g_stop="106023" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106022" i_stop="105920" i_length="103">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="105919" g_stop="105782" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="181" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="105781" i_stop="105704" i_length="78">
            <donor d_prob="0.865" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="105703" g_stop="105573" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="312" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="105039" g_stop="104974" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="378" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="104973" i_stop="104598" i_length="376">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="104597" g_stop="104534" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="442" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="104445" g_stop="104334" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="554" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="104333" i_stop="104258" i_length="76">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="104257" g_stop="104184" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="555" r_stop="628" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="104091" g_stop="103997" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="629" r_stop="723" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103">
            <donor d_prob="0.827" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="103893" g_stop="103862" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="724" r_stop="755" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="103779" g_stop="103638" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="756" r_stop="897" r_length="142" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E736268" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>897</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E736268" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106065" e_stop="106023"/>
          <exon e_start="105919" e_stop="105782"/>
          <exon e_start="105703" e_stop="105573"/>
          <exon e_start="105039" e_stop="104974"/>
          <exon e_start="104597" e_stop="104534"/>
          <exon e_start="104445" e_stop="104334"/>
          <exon e_start="104257" e_stop="104184"/>
          <exon e_start="104091" e_stop="103997"/>
          <exon e_start="103893" e_stop="103862"/>
          <exon e_start="103779" e_stop="103638"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAGGTGAGAGTTCTCTGTGCATCTGGTTCAGTGCTATCATCCTGGCACCTTACTTTCTTCCATCATTTCCTGGATCAGTCTTAAACATCACAGTTTCTGTTGGCAGCTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCAGTAGGTTCTTTCATTGACGTTGCTTACCTTTATACCCAATTTTTCAAAGAATTTCATTTTATACGATTGCTTTGTCAGGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAGGTGAGTTTGGTTTTTGTAGGTTTAACTTTATCTTGGATTGTTTTCTATTGGGTCAGGGTGAATTAACATTGGCCGTTCAGAACTTAATCTTATATGATAGAGTATGCTATGCTTTCTAACATATACATTTTGATCTTTGAGTCGCTTTAGCTGCACTGGAGATGAATTTATTTTTGTGGTGATATTTACATTTTGCATTTCGACTCTTGAGGGAGTTGCTTCACCAGAATTGTGATGCCTTAATACTTTGTTAGTATGGATTGAGTTTCTTCATGCCGAATGAGCTCCTCACTCAAATACCACTGGTTCCGTGATTTTCTGTATAATCCATACCCAGCTGTATTGCACATCTTTCTAATCAGTATATTATGCATTTTAAAGTTCGTTTTCTCTTTCCAATGGTTTGCTGCTATTTCTTATGGTTTAAAACTAATAGCCTAATGGTTTGCGGGTTACTTTTACAATTCTGTTGGTGGTATCCTTTTGGTTTCCCAGAATTAACTTGCTGATAATACTTAACCTTTATAATGCAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAGGTTCTGCACTCCGATAAATGCTGTCTTAATATATAATTTGGATAATACTAGAGATTCTCGTGCTAACACATCTGTTCTATCCATGTAGGCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAGGTAATAATAGAAGTCGCAGCGAATTATAGTTGTAACGAAAGCACTGGATCAATTCGTTTACACAGATTTTTTGCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGTGTAAGTATTGCATAAATTGGATTCTTCGAAGCTGGCCCGAGTTTTGAACTTTTAAATCATAGCAGTTGCAGTCAATTCTAATTATTATACACACTTCTTGCAGGTACCAAAGAAGCACTACTGCTATATCCATTGGTAAATATAAGCATATTTGTACAAGTGCTGTTATATTTTCCTTCAGCTTGTGCCCTCACTTCCTTTTCCACATTATATGCAGTGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCA</genome_strand>
        <mrna_strand>TGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAG.......................................................................................................CTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCA..............................................................................GTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAG........................................................................................................................................................................................................................................................................................................................................................................................GGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAG........................................................................................GCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAG............................................................................GGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATT............................................................................................GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT.......................................................................................................GTACCAAAGAAGCACTACTGCTATATCCATTG..................................................................................TGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E482914" ref_strand="+" ref_description="SGN-E482914 [cSTE-6-C23]">
      <seq>tttttatgtgagttccgggaaaaggaagcctgagcacattatagtattcagggatggtgtcagtgaatctcaatttaatcaagttctaaacatagaactggaccagctcattgaggcctgcaagtttctagatgaaaagtggtcgcccaagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtctggatctcccgataatgttccaccagggacaattatagataacaaagtttgtcatccaaggaacaatgacttctatctgtgtgcccacgcgggaatgattggtacgactcgacctacacattaccatgtgttgttggatgaagttggtttctcacctgatgaacttcaagaacttgttcataatctgtcctatgtgtaccaaagaagcactactgctatatccattgtggctccgataagttatgcccatttggctgccacacaggtgggacaatggatgaaattcgaggacgcatcagagacatcgtcaagccattggtggtctgacaatgctggtccagttactggtcctcagttgccccgtctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="105324" stop="103340"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105024" g_stop="104974" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104973" i_stop="104598" i_length="376">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104597" g_stop="104534" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="115" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104445" g_stop="104334" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="227" r_length="112" r_score="0.973"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104333" i_stop="104258" i_length="76">
            <donor d_prob="0.900" d_score="0.98"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104257" g_stop="104184" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="301" r_length="74" r_score="0.959"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="0.94"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="104091" g_stop="103997" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="396" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103">
            <donor d_prob="0.827" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="103893" g_stop="103862" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="428" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="103779" g_stop="103640" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="568" r_length="140" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E482914" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E482914" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105024" e_stop="104974"/>
          <exon e_start="104597" e_stop="104534"/>
          <exon e_start="104445" e_stop="104334"/>
          <exon e_start="104257" e_stop="104184"/>
          <exon e_start="104091" e_stop="103997"/>
          <exon e_start="103893" e_stop="103862"/>
          <exon e_start="103779" e_stop="103640"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAGGTTCTGCACTCCGATAAATGCTGTCTTAATATATAATTTGGATAATACTAGAGATTCTCGTGCTAACACATCTGTTCTATCCATGTAGGCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAGGTAATAATAGAAGTCGCAGCGAATTATAGTTGTAACGAAAGCACTGGATCAATTCGTTTACACAGATTTTTTGCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGTGTAAGTATTGCATAAATTGGATTCTTCGAAGCTGGCCCGAGTTTTGAACTTTTAAATCATAGCAGTTGCAGTCAATTCTAATTATTATACACACTTCTTGCAGGTACCAAAGAAGCACTACTGCTATATCCATTGGTAAATATAAGCATATTTGTACAAGTGCTGTTATATTTTCCTTCAGCTTGTGCCCTCACTTCCTTTTCCACATTATATGCAGTGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCA-TGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTT</genome_strand>
        <mrna_strand>TTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAG........................................................................................................................................................................................................................................................................................................................................................................................GGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAG........................................................................................GCCTGCAAGTTTCTAGATGAAAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCCGATAATGTTCCACCAG............................................................................GGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGTGCCCACGCGGGAATGATT............................................................................................GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT.......................................................................................................GTACCAAAGAAGCACTACTGCTATATCCATTG..................................................................................TGGCTCCGATAAGTTATGCCCATTTGGCTGCCACACAGGTGGGACAATGGATGAAATTCGAGGACGCATCAGAGACATCGTCAAGCCATTGGTGGTCTGAC-AATGCTGGTCCAGTTACTGGTCCTCAGTTGCCCCGTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E228430" ref_strand="+" ref_description="SGN-E228430 [cLED-3-C17]">
      <seq>tgtcagggatggtgtcagtgaatctcaatttaatcaagttctaaacatagaactggaccagctcattgaggcctgcaattttctagatgagaagtggtcgcccaagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtctggatctcctgataatgttccaccagggacaattatagataacaaagtttgtcatccaaggaacaatgacttctatctgtgcgcccatgctggaatgattggtacgactcgacctacacattaccatgtgttgttggatgaagttggtttctcacctgatgaacttcaagaacttgttcataatctgtcctatgtgtaccaaagaagcactactgctatatccattgtggctccgataagttatgcccatttggccgccacacaggtgggtcaatggatgaaattcgaggatgcatcagagacatcgtcaagccatggtggtctgactaatgctgggccagttactgttcctcaattgccccgtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="104903" stop="103341"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104603" g_stop="104534" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="70" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104445" g_stop="104334" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="182" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104333" i_stop="104258" i_length="76">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104257" g_stop="104184" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="256" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104091" g_stop="103997" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="351" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103">
            <donor d_prob="0.827" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="103893" g_stop="103862" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="383" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="103779" g_stop="103641" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="522" r_length="139" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E228430" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>522</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E228430" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104603" e_stop="104534"/>
          <exon e_start="104445" e_stop="104334"/>
          <exon e_start="104257" e_stop="104184"/>
          <exon e_start="104091" e_stop="103997"/>
          <exon e_start="103893" e_stop="103862"/>
          <exon e_start="103779" e_stop="103641"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAGGTTCTGCACTCCGATAAATGCTGTCTTAATATATAATTTGGATAATACTAGAGATTCTCGTGCTAACACATCTGTTCTATCCATGTAGGCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAGGTAATAATAGAAGTCGCAGCGAATTATAGTTGTAACGAAAGCACTGGATCAATTCGTTTACACAGATTTTTTGCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGTGTAAGTATTGCATAAATTGGATTCTTCGAAGCTGGCCCGAGTTTTGAACTTTTAAATCATAGCAGTTGCAGTCAATTCTAATTATTATACACACTTCTTGCAGGTACCAAAGAAGCACTACTGCTATATCCATTGGTAAATATAAGCATATTTGTACAAGTGCTGTTATATTTTCCTTCAGCTTGTGCCCTCACTTCCTTTTCCACATTATATGCAGTGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCT</genome_strand>
        <mrna_strand>TGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAG........................................................................................GCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAG............................................................................GGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATT............................................................................................GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT.......................................................................................................GTACCAAAGAAGCACTACTGCTATATCCATTG..................................................................................TGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGGCCAGTTACTGTTCCTCAATTGCCCCGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E249831" ref_strand="+" ref_description="SGN-E249831 [cLEF-57-C10]">
      <seq>cgtcaatatctcgttatagagcttcagtgcgcactcaatctcctaaagtggagatgattgataacatatttaaaaaagtttcagacactgatgatgatgggattatgagggaacttttgctagatttttatgtgagttccgggaaaaggaagcctgagcacattatagtattcagggatggtgtcagtgaatctcaatttaatcaagttctaaacatagaactgtaccagctcattgaggcctgcaattttctagatgagaagtggtcgcccaagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtctggatctcctgataatgttccaccagggacaattatagataacaaagtttgtcatccaaggaacaatgacttctatctgtgcgcccatgctggaatgattggtacgactcgacctacacattaccatgtgttgttggatgaagttggtttctcacctgatgaacttcaagaacttgttcataatctgtcctatgtgtaccaaagaagcactactgctatatccattgtggctccgataagttatgcccatttggccgccacacaggtgggtcaatggatgaaattcgaggatgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="105981" stop="103412"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105681" g_stop="105573" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="109" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="105039" g_stop="104974" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="175" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104973" i_stop="104598" i_length="376">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104597" g_stop="104534" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="239" r_length="64" r_score="0.984"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88">
            <donor d_prob="0.946" d_score="0.98"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104445" g_stop="104334" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="351" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="104333" i_stop="104258" i_length="76">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="104257" g_stop="104184" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="425" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="104091" g_stop="103997" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="426" r_stop="520" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103">
            <donor d_prob="0.827" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="103893" g_stop="103862" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="552" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="103779" g_stop="103712" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="553" r_stop="620" r_length="68" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E249831" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>620</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E249831" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105681" e_stop="105573"/>
          <exon e_start="105039" e_stop="104974"/>
          <exon e_start="104597" e_stop="104534"/>
          <exon e_start="104445" e_stop="104334"/>
          <exon e_start="104257" e_stop="104184"/>
          <exon e_start="104091" e_stop="103997"/>
          <exon e_start="103893" e_stop="103862"/>
          <exon e_start="103779" e_stop="103712"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAGGTGAGTTTGGTTTTTGTAGGTTTAACTTTATCTTGGATTGTTTTCTATTGGGTCAGGGTGAATTAACATTGGCCGTTCAGAACTTAATCTTATATGATAGAGTATGCTATGCTTTCTAACATATACATTTTGATCTTTGAGTCGCTTTAGCTGCACTGGAGATGAATTTATTTTTGTGGTGATATTTACATTTTGCATTTCGACTCTTGAGGGAGTTGCTTCACCAGAATTGTGATGCCTTAATACTTTGTTAGTATGGATTGAGTTTCTTCATGCCGAATGAGCTCCTCACTCAAATACCACTGGTTCCGTGATTTTCTGTATAATCCATACCCAGCTGTATTGCACATCTTTCTAATCAGTATATTATGCATTTTAAAGTTCGTTTTCTCTTTCCAATGGTTTGCTGCTATTTCTTATGGTTTAAAACTAATAGCCTAATGGTTTGCGGGTTACTTTTACAATTCTGTTGGTGGTATCCTTTTGGTTTCCCAGAATTAACTTGCTGATAATACTTAACCTTTATAATGCAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAGGTTCTGCACTCCGATAAATGCTGTCTTAATATATAATTTGGATAATACTAGAGATTCTCGTGCTAACACATCTGTTCTATCCATGTAGGCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAGGTAATAATAGAAGTCGCAGCGAATTATAGTTGTAACGAAAGCACTGGATCAATTCGTTTACACAGATTTTTTGCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGTGTAAGTATTGCATAAATTGGATTCTTCGAAGCTGGCCCGAGTTTTGAACTTTTAAATCATAGCAGTTGCAGTCAATTCTAATTATTATACACACTTCTTGCAGGTACCAAAGAAGCACTACTGCTATATCCATTGGTAAATATAAGCATATTTGTACAAGTGCTGTTATATTTTCCTTCAGCTTGTGCCCTCACTTCCTTTTCCACATTATATGCAGTGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCA</genome_strand>
        <mrna_strand>CGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAG........................................................................................................................................................................................................................................................................................................................................................................................GGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGTACCAGCTCATTGAG........................................................................................GCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAG............................................................................GGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATT............................................................................................GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT.......................................................................................................GTACCAAAGAAGCACTACTGCTATATCCATTG..................................................................................TGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E735769" ref_strand="+" ref_description="SGN-E735769 [LC02DG05]">
      <seq>tgatcagtatctcactaaccttctccttaagatcaatgctaagcttggtggtttaaattctatgttagctgcggagatttctccttccatccccatggtatctaaggtccccaccatgattcttggaatggacgtatcacatggctctcccggccagtctgatgttccatcaattgctgcagttgtgagttcaaggcagtggccgtcaatatctcgttatagagcttcagtgcgcactcaatctcctaaagtggagatgattgataacatatttaaaaaagtttcagacactgatgatgatgggattatgagggaacttttgctagatttttatgtgagttccgggaaaaggaagcctgagcacattatagtattcagggatggtgtcagtgaatctcaatttaatcaagttctaaacatagaactggaccagctcattgaggcctgcaattttctagatgagaagtggtcgcccaagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtctggatctcctgataatgttccaccagggacaattatagataacaaagtttgtcatccaaggaacaatgacttctatctgtgcgcccatgctggaatgattggtacgactcgacctacacattaccatgtgttgttggatgaagttggtttctcacctgatgaacttcaagaacttgttcataatctgtcctatgtgtacccaagaaacactactgctatatccatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="106365" stop="103563"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106065" g_stop="106023" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106022" i_stop="105920" i_length="103">
            <donor d_prob="0.974" d_score="0.98"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="105919" g_stop="105782" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="181" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="105781" i_stop="105704" i_length="78">
            <donor d_prob="0.865" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="105703" g_stop="105573" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="312" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="105039" g_stop="104974" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="378" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="104973" i_stop="104598" i_length="376">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="104597" g_stop="104534" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="442" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="104445" g_stop="104334" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="554" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="104333" i_stop="104258" i_length="76">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="104257" g_stop="104184" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="555" r_stop="628" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="104091" g_stop="103997" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="629" r_stop="723" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103">
            <donor d_prob="0.827" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="103893" g_stop="103863" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="724" r_stop="754" r_length="31" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E735769" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>754</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E735769" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106065" e_stop="106023"/>
          <exon e_start="105919" e_stop="105782"/>
          <exon e_start="105703" e_stop="105573"/>
          <exon e_start="105039" e_stop="104974"/>
          <exon e_start="104597" e_stop="104534"/>
          <exon e_start="104445" e_stop="104334"/>
          <exon e_start="104257" e_stop="104184"/>
          <exon e_start="104091" e_stop="103997"/>
          <exon e_start="103893" e_stop="103863"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAGGTGAGAGTTCTCTGTGCATCTGGTTCAGTGCTATCATCCTGGCACCTTACTTTCTTCCATCATTTCCTGGATCAGTCTTAAACATCACAGTTTCTGTTGGCAGCTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCAGTAGGTTCTTTCATTGACGTTGCTTACCTTTATACCCAATTTTTCAAAGAATTTCATTTTATACGATTGCTTTGTCAGGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAGGTGAGTTTGGTTTTTGTAGGTTTAACTTTATCTTGGATTGTTTTCTATTGGGTCAGGGTGAATTAACATTGGCCGTTCAGAACTTAATCTTATATGATAGAGTATGCTATGCTTTCTAACATATACATTTTGATCTTTGAGTCGCTTTAGCTGCACTGGAGATGAATTTATTTTTGTGGTGATATTTACATTTTGCATTTCGACTCTTGAGGGAGTTGCTTCACCAGAATTGTGATGCCTTAATACTTTGTTAGTATGGATTGAGTTTCTTCATGCCGAATGAGCTCCTCACTCAAATACCACTGGTTCCGTGATTTTCTGTATAATCCATACCCAGCTGTATTGCACATCTTTCTAATCAGTATATTATGCATTTTAAAGTTCGTTTTCTCTTTCCAATGGTTTGCTGCTATTTCTTATGGTTTAAAACTAATAGCCTAATGGTTTGCGGGTTACTTTTACAATTCTGTTGGTGGTATCCTTTTGGTTTCCCAGAATTAACTTGCTGATAATACTTAACCTTTATAATGCAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAGGTTCTGCACTCCGATAAATGCTGTCTTAATATATAATTTGGATAATACTAGAGATTCTCGTGCTAACACATCTGTTCTATCCATGTAGGCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAGGTAATAATAGAAGTCGCAGCGAATTATAGTTGTAACGAAAGCACTGGATCAATTCGTTTACACAGATTTTTTGCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGTGTAAGTATTGCATAAATTGGATTCTTCGAAGCTGGCCCGAGTTTTGAACTTTTAAATCATAGCAGTTGCAGTCAATTCTAATTATTATACACACTTCTTGCAGGTACCAAAGAAGCACTACTGCTATATCCATT</genome_strand>
        <mrna_strand>TGATCAGTATCTCACTAACCTTCTCCTTAAGATCAATGCTAAG.......................................................................................................CTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCA..............................................................................GTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAG........................................................................................................................................................................................................................................................................................................................................................................................GGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAG........................................................................................GCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAG............................................................................GGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATT............................................................................................GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT.......................................................................................................GTACCCAAGAAACACTACTGCTATATCCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E464803" ref_strand="+" ref_description="SGN-E464803 [cPRO-19-K13]">
      <seq>ctcgttatagagcttccgtgcgcactcaatctcctaaagtagagatgattgataacatatttaaaaaagtttcagacactgaggatgatgggattatgagggaacttttgctagatttttatgtgagttccgggaaaaggaagcctgagcacattatagtattcagggatggtgtcagtgaatctcaatttaatcaagttctaaacatagaactggaccagctcattgaggcctgcaagtttctagatgaaaagtggtcgcccaagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtctggatctcctgataatggtccaccagggacaattatagagaacaaagtttgtcatccaaggaacaatgacttctatctgtgtgcccacgccggaatgattggtacgactccacctacacattaccatgtggtgttggatgaaattgggttctcccctgatgaacttccagaacttggtcataatctggcctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="105972" stop="103699"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105672" g_stop="105573" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="100" r_length="100" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="105039" g_stop="104974" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="166" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104973" i_stop="104598" i_length="376">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104597" g_stop="104534" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="230" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104445" g_stop="104334" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="342" r_length="112" r_score="0.973"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="104333" i_stop="104258" i_length="76">
            <donor d_prob="0.900" d_score="0.98"/>
            <acceptor a_prob="0.890" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="104257" g_stop="104184" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="416" r_length="74" r_score="0.946"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="0.94"/>
            <acceptor a_prob="0.988" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="104091" g_stop="103999" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="509" r_length="93" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E464803" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E464803" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105672" e_stop="105573"/>
          <exon e_start="105039" e_stop="104974"/>
          <exon e_start="104597" e_stop="104534"/>
          <exon e_start="104445" e_stop="104334"/>
          <exon e_start="104257" e_stop="104184"/>
          <exon e_start="104091" e_stop="103999"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAGGTGAGTTTGGTTTTTGTAGGTTTAACTTTATCTTGGATTGTTTTCTATTGGGTCAGGGTGAATTAACATTGGCCGTTCAGAACTTAATCTTATATGATAGAGTATGCTATGCTTTCTAACATATACATTTTGATCTTTGAGTCGCTTTAGCTGCACTGGAGATGAATTTATTTTTGTGGTGATATTTACATTTTGCATTTCGACTCTTGAGGGAGTTGCTTCACCAGAATTGTGATGCCTTAATACTTTGTTAGTATGGATTGAGTTTCTTCATGCCGAATGAGCTCCTCACTCAAATACCACTGGTTCCGTGATTTTCTGTATAATCCATACCCAGCTGTATTGCACATCTTTCTAATCAGTATATTATGCATTTTAAAGTTCGTTTTCTCTTTCCAATGGTTTGCTGCTATTTCTTATGGTTTAAAACTAATAGCCTAATGGTTTGCGGGTTACTTTTACAATTCTGTTGGTGGTATCCTTTTGGTTTCCCAGAATTAACTTGCTGATAATACTTAACCTTTATAATGCAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAGGTTCTGCACTCCGATAAATGCTGTCTTAATATATAATTTGGATAATACTAGAGATTCTCGTGCTAACACATCTGTTCTATCCATGTAGGCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAGGTAATAATAGAAGTCGCAGCGAATTATAGTTGTAACGAAAGCACTGGATCAATTCGTTTACACAGATTTTTTGCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTAT</genome_strand>
        <mrna_strand>CTCGTTATAGAGCTTCCGTGCGCACTCAATCTCCTAAAGTAGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGAGGATGATGGGATTATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAG........................................................................................................................................................................................................................................................................................................................................................................................GGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAG........................................................................................GCCTGCAAGTTTCTAGATGAAAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGGTCCACCAG............................................................................GGACAATTATAGAGAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGTGCCCACGCCGGAATGATT............................................................................................GGTACGACTCCACCTACACATTACCATGTGGTGTTGGATGAAATTGGGTTCTCCCCTGATGAACTTCCAGAACTTGGTCATAATCTGGCCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E440703" ref_strand="+" ref_description="SGN-E440703 [cSTA-18-H4]">
      <seq>gaagtttctccttccatccccatggtatctaaggtccccaccatgattcttggaatggaccgtatcacatggctctcccggccagtctgatgtcccatcaattgctgcagttgtgagttcaaggcagtggccgtcaatatctcgttatagagcttccgtgcgccactcaatctcctaaagtagagatgattgataacatatttaaaaaagtttcagacactgaggatgatgggattatgagggaacttttgctagatttttatgtgagttccgggaaaaggaagcctgagcacattatagtattcagggatggtgtcagtgaatctcaatttaatcaagttctaaacatagaactggaccagctcattgaggcctgcaagtttctagatgaaaagtggtcgcccaagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtctggatctcccgataatgttccaccagggacaattatagataacaaagtttgtcatccaaggaacaatgacttctatctgtgtgcccacgcgggaatgattggtacgactcgacctacacattaccatgtgttgttggatgaagttggtttctcacctgatgaacttcaagaacttgttcataatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="106190" stop="103707"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105889" g_stop="105782" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="109" r_length="109" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="105781" i_stop="105704" i_length="78">
            <donor d_prob="0.865" d_score="0.94"/>
            <acceptor a_prob="0.942" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="105703" g_stop="105573" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="241" r_length="132" r_score="0.962"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="105039" g_stop="104974" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="307" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104973" i_stop="104598" i_length="376">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104597" g_stop="104534" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="371" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="104445" g_stop="104334" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="483" r_length="112" r_score="0.973"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="104333" i_stop="104258" i_length="76">
            <donor d_prob="0.900" d_score="0.98"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="104257" g_stop="104184" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="557" r_length="74" r_score="0.959"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="0.94"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="104091" g_stop="104007" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="558" r_stop="642" r_length="85" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E440703" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E440703" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105889" e_stop="105782"/>
          <exon e_start="105703" e_stop="105573"/>
          <exon e_start="105039" e_stop="104974"/>
          <exon e_start="104597" e_stop="104534"/>
          <exon e_start="104445" e_stop="104334"/>
          <exon e_start="104257" e_stop="104184"/>
          <exon e_start="104091" e_stop="104007"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGA-CGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCAGTAGGTTCTTTCATTGACGTTGCTTACCTTTATACCCAATTTTTCAAAGAATTTCATTTTATACGATTGCTTTGTCAGGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCG-CACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAGGTGAGTTTGGTTTTTGTAGGTTTAACTTTATCTTGGATTGTTTTCTATTGGGTCAGGGTGAATTAACATTGGCCGTTCAGAACTTAATCTTATATGATAGAGTATGCTATGCTTTCTAACATATACATTTTGATCTTTGAGTCGCTTTAGCTGCACTGGAGATGAATTTATTTTTGTGGTGATATTTACATTTTGCATTTCGACTCTTGAGGGAGTTGCTTCACCAGAATTGTGATGCCTTAATACTTTGTTAGTATGGATTGAGTTTCTTCATGCCGAATGAGCTCCTCACTCAAATACCACTGGTTCCGTGATTTTCTGTATAATCCATACCCAGCTGTATTGCACATCTTTCTAATCAGTATATTATGCATTTTAAAGTTCGTTTTCTCTTTCCAATGGTTTGCTGCTATTTCTTATGGTTTAAAACTAATAGCCTAATGGTTTGCGGGTTACTTTTACAATTCTGTTGGTGGTATCCTTTTGGTTTCCCAGAATTAACTTGCTGATAATACTTAACCTTTATAATGCAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAGGTTCTGCACTCCGATAAATGCTGTCTTAATATATAATTTGGATAATACTAGAGATTCTCGTGCTAACACATCTGTTCTATCCATGTAGGCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAGGTAATAATAGAAGTCGCAGCGAATTATAGTTGTAACGAAAGCACTGGATCAATTCGTTTACACAGATTTTTTGCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATC</genome_strand>
        <mrna_strand>GAAGTTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACCGTATCACATGGCTCTCCCGGCCAGTCTGATGTCCCATCAATTGCTGCA..............................................................................GTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCCGTGCGCCACTCAATCTCCTAAAGTAGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGAGGATGATGGGATTATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAG........................................................................................................................................................................................................................................................................................................................................................................................GGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAG........................................................................................GCCTGCAAGTTTCTAGATGAAAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCCGATAATGTTCCACCAG............................................................................GGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGTGCCCACGCGGGAATGATT............................................................................................GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E603012" ref_strand="+" ref_description="SGN-E603012 [56090]">
      <seq>gtccccaccatgattcttggaatggacgtatcacatggctctcccggccagtctgatgtcccatcaattgctgcagttgtgagttcacggcagtggccgtcaatatctcgttatagagcttccgtgcgcactcaatctcctaaagtagagatgattgataacatatttaaaaaagtttcagacactgaggatgatgggattatgagggaacttttgctagatttttatgtgagttccgggaaaaggaagcctgagcacattatagtattcagggatggtgtcagtgaatctcaatttaatcaagttctaaacatagaactggaccagctcattgaggcctgcaagtttctagatgaaaagtggtcgcccaagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtctggatctcctgataatgttccaccagggacaattatagataacaaagtttgtcatccaaggaacaatgacttctatctgtgtgcccacgcaggaatgattggtacgactcgacctacacattaccatgtgttgttggatgaaggttggtttcttcacctgatgaactttcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="106156" stop="103722"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105856" g_stop="105782" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="105781" i_stop="105704" i_length="78">
            <donor d_prob="0.865" d_score="0.98"/>
            <acceptor a_prob="0.942" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="105703" g_stop="105573" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="206" r_length="131" r_score="0.969"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="105039" g_stop="104974" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="272" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104973" i_stop="104598" i_length="376">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104597" g_stop="104534" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="336" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="104445" g_stop="104334" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="448" r_length="112" r_score="0.982"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="104333" i_stop="104258" i_length="76">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="104257" g_stop="104184" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="522" r_length="74" r_score="0.959"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="0.94"/>
            <acceptor a_prob="0.988" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="104091" g_stop="104022" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="595" r_length="73" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E603012" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>592</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E603012" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105856" e_stop="105782"/>
          <exon e_start="105703" e_stop="105573"/>
          <exon e_start="105039" e_stop="104974"/>
          <exon e_start="104597" e_stop="104534"/>
          <exon e_start="104445" e_stop="104334"/>
          <exon e_start="104257" e_stop="104184"/>
          <exon e_start="104091" e_stop="104022"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCAGTAGGTTCTTTCATTGACGTTGCTTACCTTTATACCCAATTTTTCAAAGAATTTCATTTTATACGATTGCTTTGTCAGGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAGGTGAGTTTGGTTTTTGTAGGTTTAACTTTATCTTGGATTGTTTTCTATTGGGTCAGGGTGAATTAACATTGGCCGTTCAGAACTTAATCTTATATGATAGAGTATGCTATGCTTTCTAACATATACATTTTGATCTTTGAGTCGCTTTAGCTGCACTGGAGATGAATTTATTTTTGTGGTGATATTTACATTTTGCATTTCGACTCTTGAGGGAGTTGCTTCACCAGAATTGTGATGCCTTAATACTTTGTTAGTATGGATTGAGTTTCTTCATGCCGAATGAGCTCCTCACTCAAATACCACTGGTTCCGTGATTTTCTGTATAATCCATACCCAGCTGTATTGCACATCTTTCTAATCAGTATATTATGCATTTTAAAGTTCGTTTTCTCTTTCCAATGGTTTGCTGCTATTTCTTATGGTTTAAAACTAATAGCCTAATGGTTTGCGGGTTACTTTTACAATTCTGTTGGTGGTATCCTTTTGGTTTCCCAGAATTAACTTGCTGATAATACTTAACCTTTATAATGCAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAGGTTCTGCACTCCGATAAATGCTGTCTTAATATATAATTTGGATAATACTAGAGATTCTCGTGCTAACACATCTGTTCTATCCATGTAGGCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAGGTAATAATAGAAGTCGCAGCGAATTATAGTTGTAACGAAAGCACTGGATCAATTCGTTTACACAGATTTTTTGCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAA-GTTGGTTTC-TCACCTGATGAAC-TTCAAG</genome_strand>
        <mrna_strand>GTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTCCCATCAATTGCTGCA..............................................................................GTTGTGAGTTCACGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCCGTGCGCACTCAATCTCCTAAAGTAGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGAGGATGATGGGATTATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAG........................................................................................................................................................................................................................................................................................................................................................................................GGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAG........................................................................................GCCTGCAAGTTTCTAGATGAAAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAG............................................................................GGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGTGCCCACGCAGGAATGATT............................................................................................GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGGTTGGTTTCTTCACCTGATGAACTTTCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E475152" ref_strand="+" ref_description="SGN-E475152 [cSTB-39-K18]">
      <seq>cgaggttaaattctatgttagctgcggaagtttctccttccatccccatggtatctaaggtccccaccatgattcttggaatggacgtatcacatggctctcccggccagtctgatgtcccatcaattgctgcagttgtgagttcaaggcagtggccgtcaatatctcgttatagagcttccgtgcgcactcaatctcctaaagtagagatgattgataacatatttaaaaaagtttcagacactgaggatgatgggattatgagggaacttttgctagatttttatgtgagttccgggaaaaggaagcctgagcacattatagtattcagggatggtgtcagtgaatctcaatttaatcaagttctaaacatagaactggaccagctcattgaggcctgcaagtttctagatgaaaagtggtcgcccaagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtctggatctcctgataatgttccacccaggacaattatagagaacaaagtttgtcatccaaagaacaatgacttctatctgtgtgcccacgcgggaatgattggtacgactcgacctacacattaccatgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="106215" stop="1673"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105916" g_stop="105782" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="134" r_length="134" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="105781" i_stop="105704" i_length="78">
            <donor d_prob="0.865" d_score="0.98"/>
            <acceptor a_prob="0.942" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="105703" g_stop="105573" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="265" r_length="131" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="105039" g_stop="104974" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="331" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104973" i_stop="104598" i_length="376">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104597" g_stop="104534" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="395" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="104445" g_stop="104334" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="507" r_length="112" r_score="0.964"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="104333" i_stop="104258" i_length="76">
            <donor d_prob="0.900" d_score="0.96"/>
            <acceptor a_prob="0.890" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="104257" g_stop="104184" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="581" r_length="74" r_score="0.932"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="0.92"/>
            <acceptor a_prob="0.988" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="104091" g_stop="104062" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="582" r_stop="611" r_length="30" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E475152" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E475152" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105916" e_stop="105782"/>
          <exon e_start="105703" e_stop="105573"/>
          <exon e_start="105039" e_stop="104974"/>
          <exon e_start="104597" e_stop="104534"/>
          <exon e_start="104445" e_stop="104334"/>
          <exon e_start="104257" e_stop="104184"/>
          <exon e_start="104091" e_stop="104062"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCAGTAGGTTCTTTCATTGACGTTGCTTACCTTTATACCCAATTTTTCAAAGAATTTCATTTTATACGATTGCTTTGTCAGGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAGGTGAGTTTGGTTTTTGTAGGTTTAACTTTATCTTGGATTGTTTTCTATTGGGTCAGGGTGAATTAACATTGGCCGTTCAGAACTTAATCTTATATGATAGAGTATGCTATGCTTTCTAACATATACATTTTGATCTTTGAGTCGCTTTAGCTGCACTGGAGATGAATTTATTTTTGTGGTGATATTTACATTTTGCATTTCGACTCTTGAGGGAGTTGCTTCACCAGAATTGTGATGCCTTAATACTTTGTTAGTATGGATTGAGTTTCTTCATGCCGAATGAGCTCCTCACTCAAATACCACTGGTTCCGTGATTTTCTGTATAATCCATACCCAGCTGTATTGCACATCTTTCTAATCAGTATATTATGCATTTTAAAGTTCGTTTTCTCTTTCCAATGGTTTGCTGCTATTTCTTATGGTTTAAAACTAATAGCCTAATGGTTTGCGGGTTACTTTTACAATTCTGTTGGTGGTATCCTTTTGGTTTCCCAGAATTAACTTGCTGATAATACTTAACCTTTATAATGCAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAGGTTCTGCACTCCGATAAATGCTGTCTTAATATATAATTTGGATAATACTAGAGATTCTCGTGCTAACACATCTGTTCTATCCATGTAGGCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAGGTAATAATAGAAGTCGCAGCGAATTATAGTTGTAACGAAAGCACTGGATCAATTCGTTTACACAGATTTTTTGCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTG</genome_strand>
        <mrna_strand>CGAGG-TTAAATTCTATGTTAGCTGCGGAAGTTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTCCCATCAATTGCTGCA..............................................................................GTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCCGTGCGCACTCAATCTCCTAAAGTAGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGAGGATGATGGGATTATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAG........................................................................................................................................................................................................................................................................................................................................................................................GGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAG........................................................................................GCCTGCAAGTTTCTAGATGAAAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCCA............................................................................GGACAATTATAGAGAACAAAGTTTGTCATCCAAAGAACAATGACTTCTATCTGTGTGCCCACGCGGGAATGATT............................................................................................GGTACGACTCGACCTACACATTACCATGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E577105" ref_strand="+" ref_description="SGN-E577105 [32821]">
      <seq>attctatgttagctgcggaagtttctccttccatccccatggtatctaaggtccccaccatgattcttggaatggacgtatcacatggctctcccggccagtctgatgtcccatcaattgctgcagttgtgagttcaaggcagtggccgtcaatatctcgttatagagcttccgtgcgcactcaatctcctaaagtagagatgattgataatttatttaaaaaagtttcagacactgaggatgatgggattatgagggaacttttgctagatttttatgtgagttccgggaaaaggaagcctgagcacattatagtattcagggatggtgtcagtgaatctcaatttaatcaagttctaaacatagaactggaccagctcattgaggcctgcaagtttctagatgaaaagtggtcgcccaagttcgtcatcattcgtcgctcagaaaaatcatcatacaaagtttgtccagtctggatctcccga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="106206" stop="1956"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105906" g_stop="105782" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="105781" i_stop="105704" i_length="78">
            <donor d_prob="0.865" d_score="0.98"/>
            <acceptor a_prob="0.942" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="105703" g_stop="105573" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="256" r_length="131" r_score="0.962"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533">
            <donor d_prob="0.996" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="105039" g_stop="104974" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="322" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104973" i_stop="104598" i_length="376">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104597" g_stop="104534" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="386" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="104445" g_stop="104348" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="485" r_length="99" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E577105" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E577105" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105906" e_stop="105782"/>
          <exon e_start="105703" e_stop="105573"/>
          <exon e_start="105039" e_stop="104974"/>
          <exon e_start="104597" e_stop="104534"/>
          <exon e_start="104445" e_stop="104348"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCAGTAGGTTCTTTCATTGACGTTGCTTACCTTTATACCCAATTTTTCAAAGAATTTCATTTTATACGATTGCTTTGTCAGGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAGGTGAGTTTGGTTTTTGTAGGTTTAACTTTATCTTGGATTGTTTTCTATTGGGTCAGGGTGAATTAACATTGGCCGTTCAGAACTTAATCTTATATGATAGAGTATGCTATGCTTTCTAACATATACATTTTGATCTTTGAGTCGCTTTAGCTGCACTGGAGATGAATTTATTTTTGTGGTGATATTTACATTTTGCATTTCGACTCTTGAGGGAGTTGCTTCACCAGAATTGTGATGCCTTAATACTTTGTTAGTATGGATTGAGTTTCTTCATGCCGAATGAGCTCCTCACTCAAATACCACTGGTTCCGTGATTTTCTGTATAATCCATACCCAGCTGTATTGCACATCTTTCTAATCAGTATATTATGCATTTTAAAGTTCGTTTTCTCTTTCCAATGGTTTGCTGCTATTTCTTATGGTTTAAAACTAATAGCCTAATGGTTTGCGGGTTACTTTTACAATTCTGTTGGTGGTATCCTTTTGGTTTCCCAGAATTAACTTGCTGATAATACTTAACCTTTATAATGCAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAGGTTCTGCACTCCGATAAATGCTGTCTTAATATATAATTTGGATAATACTAGAGATTCTCGTGCTAACACATCTGTTCTATCCATGTAGGCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATT-GTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGA</genome_strand>
        <mrna_strand>ATTCTATGTTAGCTGCGGAAGTTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTCCCATCAATTGCTGCA..............................................................................GTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCCGTGCGCACTCAATCTCCTAAAGTAGAGATGATTGATAATTTATTTAAAAAAGTTTCAGACACTGAGGATGATGGGATTATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAG........................................................................................................................................................................................................................................................................................................................................................................................GGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAG........................................................................................GCCTGCAAGTTTCTAGATGAAAAGTGGTCGCCCAAGTTCGTCATCATTCGTCGCTCAGAAAAATCATCATACAAAGTTTGTCCAGTCTGGATCTCCCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E692346" ref_strand="+" ref_description="SGN-E692346 [LH_Ea08H16]">
      <seq>cacgttggcctagtcagagatttgacaagacttggagagacgaagggaattagtgtggaagctccatttgaagtgtttgaagagtctccacagcttagaagggctccacctgttgtcagagttgacaaaatgtttgaagagatccagtcaaaacttcctggtgccccgaagtttcttctctgtcttcttcctgagaggaaaaattgtgacatatatggtccatggaagcgaaaaaatctggctgatcatggtatagtaactcaatgcttggctcctggaagagttaatgatcagtatctcacaaaccttctccttaagatcaatgctaagctcggtggtttaaattctatgttagctgcggaggtttctccttccatccccatggtatctaaggtccccaccatgattcttggaatggacgtatcacatggctctcccggccagtctgatgttccatcaattgctgcagttgtgagttcaaggcagtggccttcaatatctcgttacagagcttctgtgcgcactcaatctcctaaagttgagatgattgataacatatttaaaaaggtttcagacactgatgatgatgggattatgagggaacttttgctagatttttatgtgagttccgggaaaaggaagcctgagcacattatagtattcagggatggtgtcagtgaatctcaatttaatcaggttctaaacatagaactggaccagctcattgaggcctgcaattttctagatgaaaagtggtcgcccaagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtctggatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="106811" stop="1959"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106514" g_stop="106464" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="0.902"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106463" i_stop="106388" i_length="76">
            <donor d_prob="0.537" d_score="0.92"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106387" g_stop="106222" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="217" r_length="166" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106221" i_stop="106136" i_length="86">
            <donor d_prob="0.742" d_score="0.98"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106135" g_stop="106023" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="330" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="106022" i_stop="105920" i_length="103">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="105919" g_stop="105782" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="468" r_length="138" r_score="0.986"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="105781" i_stop="105704" i_length="78">
            <donor d_prob="0.865" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="105703" g_stop="105573" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="599" r_length="131" r_score="0.962"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="105039" g_stop="104974" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="600" r_stop="665" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="104973" i_stop="104598" i_length="376">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="104597" g_stop="104534" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="666" r_stop="729" r_length="64" r_score="0.984"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88">
            <donor d_prob="0.946" d_score="0.98"/>
            <acceptor a_prob="0.929" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="104445" g_stop="104354" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="730" r_stop="821" r_length="92" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E692346" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>821</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E692346" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106514" e_stop="106464"/>
          <exon e_start="106387" e_stop="106222"/>
          <exon e_start="106135" e_stop="106023"/>
          <exon e_start="105919" e_stop="105782"/>
          <exon e_start="105703" e_stop="105573"/>
          <exon e_start="105039" e_stop="104974"/>
          <exon e_start="104597" e_stop="104534"/>
          <exon e_start="104445" e_stop="104354"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCGTGGTCTAGTCAGAGATTTGACAAGACTTGGAGAGACGAAGGGAATTGTATGTTTTATCAACTTCTGATACTTAAAAACTGAGAAGGAAGGACGATTTCATTATTCCTGTTTTAACGTTACAGAGTGTGGAAGCTCCATTTGAAGTGTTTGAAGAGTCTCCACAGCTTAGAAGGGCTCCACCTGTTGTCAGAGTTGACAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGGTGCCCCCAAGTTTCTTCTCTGTCTTCTTCCTGAGAGGAAAAATTGTGACATATATGGTTAGTCCGATTTGCTTGTTCTGTTGACCACTAAGCTTATCTCATAAGTACTAATTACTAAAACAATTGACTGATGAAACTTGAAGGTCCATGGAAGCGAAAAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAGGTGAGAGTTCTCTGTGCATCTGGTTCAGTGCTATCATCCTGGCACCTTACTTTCTTCCATCATTTCCTGGATCAGTCTTAAACATCACAGTTTCTGTTGGCAGCTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCAGTAGGTTCTTTCATTGACGTTGCTTACCTTTATACCCAATTTTTCAAAGAATTTCATTTTATACGATTGCTTTGTCAGGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAGGTGAGTTTGGTTTTTGTAGGTTTAACTTTATCTTGGATTGTTTTCTATTGGGTCAGGGTGAATTAACATTGGCCGTTCAGAACTTAATCTTATATGATAGAGTATGCTATGCTTTCTAACATATACATTTTGATCTTTGAGTCGCTTTAGCTGCACTGGAGATGAATTTATTTTTGTGGTGATATTTACATTTTGCATTTCGACTCTTGAGGGAGTTGCTTCACCAGAATTGTGATGCCTTAATACTTTGTTAGTATGGATTGAGTTTCTTCATGCCGAATGAGCTCCTCACTCAAATACCACTGGTTCCGTGATTTTCTGTATAATCCATACCCAGCTGTATTGCACATCTTTCTAATCAGTATATTATGCATTTTAAAGTTCGTTTTCTCTTTCCAATGGTTTGCTGCTATTTCTTATGGTTTAAAACTAATAGCCTAATGGTTTGCGGGTTACTTTTACAATTCTGTTGGTGGTATCCTTTTGGTTTCCCAGAATTAACTTGCTGATAATACTTAACCTTTATAATGCAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAGGTTCTGCACTCCGATAAATGCTGTCTTAATATATAATTTGGATAATACTAGAGATTCTCGTGCTAACACATCTGTTCTATCCATGTAGGCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATC</genome_strand>
        <mrna_strand>CACGTTGGCCTAGTCAGAGATTTGACAAGACTTGGAGAGACGAAGGGAATT............................................................................AGTGTGGAAGCTCCATTTGAAGTGTTTGAAGAGTCTCCACAGCTTAGAAGGGCTCCACCTGTTGTCAGAGTTGACAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGGTGCCCCGAAGTTTCTTCTCTGTCTTCTTCCTGAGAGGAAAAATTGTGACATATATG......................................................................................GTCCATGGAAGCGAAAAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAG.......................................................................................................CTCGGTGGTTTAAATTCTATGTTAGCTGCGGAGGTTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCA..............................................................................GTTGTGAGTTCAAGGCAGTGGCCTTCAATATCTCGTTACAGAGCTTCTGTGCGCACTCAATCTCCTAAAGTTGAGATGATTGATAACATATTTAAAAAGGTTTCAGACACTGATGATGATGGGATTATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAG........................................................................................................................................................................................................................................................................................................................................................................................GGATGGTGTCAGTGAATCTCAATTTAATCAGGTTCTAAACATAGAACTGGACCAGCTCATTGAG........................................................................................GCCTGCAATTTTCTAGATGAAAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E451075" ref_strand="+" ref_description="SGN-E451075 [cSTS-11-M4]">
      <seq>cttcctggtgcccccgaagtttcttctctgtcttcttcccgagaggaaaaattgtgacactactatggaccactggaagcggaaaaatctggctgatcatggtatagtaacccaatgcttggctcctggaagagttaatgatcagtatctcacaaaccttctccttaagatcaatgctaagctcggtggtttaaattctatgttagctgcggaagtttctccttccatccccatggtatctaaggtccccaccatgattcttggaatggacgtatcacatggctctcccggccagtctgatgtcccatcaattgctgcagttgtgagttcaaggcagtggccgtcaatatctcgttatagagcttccgtgcgcactcaatctcctaaagtagagatgattgataacatatttaaaaaagtttcagacactgaggatgatgggattatgagggaacttttgctagatttttatgtgagttccgggaaaaggaagcctgagcacattatagtattcagggatggtgtcagtgaatctcaatttaatcaagttctaaacatagaactggaccagctcattgaggcctgcaagtttctagatgaaaagtggtcgcccaagtttgttatcattgttgctcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="106585" stop="1994"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106285" g_stop="106222" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="67" r_length="67" r_score="0.891"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106221" i_stop="106136" i_length="86">
            <donor d_prob="0.742" d_score="0.90"/>
            <acceptor a_prob="0.955" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106135" g_stop="106023" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="181" r_length="114" r_score="0.956"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106022" i_stop="105920" i_length="103">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="105919" g_stop="105782" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="319" r_length="138" r_score="0.971"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="105781" i_stop="105704" i_length="78">
            <donor d_prob="0.865" d_score="0.98"/>
            <acceptor a_prob="0.942" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="105703" g_stop="105573" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="450" r_length="131" r_score="0.977"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="105039" g_stop="104974" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="516" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="104973" i_stop="104598" i_length="376">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="104597" g_stop="104534" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="517" r_stop="580" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="104445" g_stop="104389" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="581" r_stop="637" r_length="57" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E451075" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E451075" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106285" e_stop="106222"/>
          <exon e_start="106135" e_stop="106023"/>
          <exon e_start="105919" e_stop="105782"/>
          <exon e_start="105703" e_stop="105573"/>
          <exon e_start="105039" e_stop="104974"/>
          <exon e_start="104597" e_stop="104534"/>
          <exon e_start="104445" e_stop="104389"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCCTGGTGCCCCC-AAGTTTCTTCTCTGTCTTCTTCCTGAGAGGAAAAATTGTGACA-TA-TATGGTTAGTCCGATTTGCTTGTTCTGTTGACCACTAAGCTTATCTCATAAGTACTAATTACTAAAACAATTGACTGATGAAACTTGAAGGTCCA-TGGAAGCGAAAAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAGGTGAGAGTTCTCTGTGCATCTGGTTCAGTGCTATCATCCTGGCACCTTACTTTCTTCCATCATTTCCTGGATCAGTCTTAAACATCACAGTTTCTGTTGGCAGCTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCAGTAGGTTCTTTCATTGACGTTGCTTACCTTTATACCCAATTTTTCAAAGAATTTCATTTTATACGATTGCTTTGTCAGGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAGGTGAGTTTGGTTTTTGTAGGTTTAACTTTATCTTGGATTGTTTTCTATTGGGTCAGGGTGAATTAACATTGGCCGTTCAGAACTTAATCTTATATGATAGAGTATGCTATGCTTTCTAACATATACATTTTGATCTTTGAGTCGCTTTAGCTGCACTGGAGATGAATTTATTTTTGTGGTGATATTTACATTTTGCATTTCGACTCTTGAGGGAGTTGCTTCACCAGAATTGTGATGCCTTAATACTTTGTTAGTATGGATTGAGTTTCTTCATGCCGAATGAGCTCCTCACTCAAATACCACTGGTTCCGTGATTTTCTGTATAATCCATACCCAGCTGTATTGCACATCTTTCTAATCAGTATATTATGCATTTTAAAGTTCGTTTTCTCTTTCCAATGGTTTGCTGCTATTTCTTATGGTTTAAAACTAATAGCCTAATGGTTTGCGGGTTACTTTTACAATTCTGTTGGTGGTATCCTTTTGGTTTCCCAGAATTAACTTGCTGATAATACTTAACCTTTATAATGCAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAGGTTCTGCACTCCGATAAATGCTGTCTTAATATATAATTTGGATAATACTAGAGATTCTCGTGCTAACACATCTGTTCTATCCATGTAGGCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAG</genome_strand>
        <mrna_strand>CTTCCTGGTGCCCCCGAAGTTTCTTCTCTGTCTTCTTCCCGAGAGGAAAAATTGTGACACTACTATG......................................................................................GACCACTGGAAGCGGAAAAATCTGGCTGATCATGGTATAGTAACCCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAG.......................................................................................................CTCGGTGGTTTAAATTCTATGTTAGCTGCGGAAGTTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTCCCATCAATTGCTGCA..............................................................................GTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCCGTGCGCACTCAATCTCCTAAAGTAGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGAGGATGATGGGATTATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAG........................................................................................................................................................................................................................................................................................................................................................................................GGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAG........................................................................................GCCTGCAAGTTTCTAGATGAAAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E203033" ref_strand="+" ref_description="SGN-E203033 [cLEB-3-I23]">
      <seq>gcacgaggtgacatatatggtccatggaagcgaaaaaatctggctgatcatggtatagtaactcaatgcttggctcctggaagagttaatgatcagtatctcacaaaccttctccttaagatcaatgctaagcttggtggtttaaattctatgttagctgcggagatttctccttccatccccatggtatctaaggtccccaccatgattcttggaatggacgtatcacatggctctcccggccagtctgatgttccatcaattgctgcagttgtgagttcaaggcagtggccgtcaatatctcgttatagagcttcagtgcgcactcaatctcctaaagtggagatgattgataacatatttaaaaaagtttcagacactgatgatgatgggattatgagggaacttttgctagatttttatgtgagttccgggaaaaggaagcctgagcacattatagtattcagggatggtgtcagtgaatctcaatttaatcaagttctaaacatagaactggaccagctcattgaggcctgcaattttctagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="106449" stop="2138"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106241" g_stop="106222" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="19" r_length="19" r_score="0.750"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106221" i_stop="106136" i_length="86">
            <donor d_prob="0.742" d_score="0.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106135" g_stop="106023" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="132" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106022" i_stop="105920" i_length="103">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="105919" g_stop="105782" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="270" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="105781" i_stop="105704" i_length="78">
            <donor d_prob="0.865" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="105703" g_stop="105573" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="401" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="105039" g_stop="104974" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="402" r_stop="467" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="104973" i_stop="104598" i_length="376">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="104597" g_stop="104534" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="468" r_stop="531" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="104445" g_stop="104428" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="532" r_stop="549" r_length="18" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E203033" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>550</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E203033" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106241" e_stop="106222"/>
          <exon e_start="106135" e_stop="106023"/>
          <exon e_start="105919" e_stop="105782"/>
          <exon e_start="105703" e_stop="105573"/>
          <exon e_start="105039" e_stop="104974"/>
          <exon e_start="104597" e_stop="104534"/>
          <exon e_start="104445" e_stop="104428"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAATTGTGACATATATGGTTAGTCCGATTTGCTTGTTCTGTTGACCACTAAGCTTATCTCATAAGTACTAATTACTAAAACAATTGACTGATGAAACTTGAAGGTCCATGGAAGCGAAAAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAGGTGAGAGTTCTCTGTGCATCTGGTTCAGTGCTATCATCCTGGCACCTTACTTTCTTCCATCATTTCCTGGATCAGTCTTAAACATCACAGTTTCTGTTGGCAGCTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCAGTAGGTTCTTTCATTGACGTTGCTTACCTTTATACCCAATTTTTCAAAGAATTTCATTTTATACGATTGCTTTGTCAGGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAGGTGAGTTTGGTTTTTGTAGGTTTAACTTTATCTTGGATTGTTTTCTATTGGGTCAGGGTGAATTAACATTGGCCGTTCAGAACTTAATCTTATATGATAGAGTATGCTATGCTTTCTAACATATACATTTTGATCTTTGAGTCGCTTTAGCTGCACTGGAGATGAATTTATTTTTGTGGTGATATTTACATTTTGCATTTCGACTCTTGAGGGAGTTGCTTCACCAGAATTGTGATGCCTTAATACTTTGTTAGTATGGATTGAGTTTCTTCATGCCGAATGAGCTCCTCACTCAAATACCACTGGTTCCGTGATTTTCTGTATAATCCATACCCAGCTGTATTGCACATCTTTCTAATCAGTATATTATGCATTTTAAAGTTCGTTTTCTCTTTCCAATGGTTTGCTGCTATTTCTTATGGTTTAAAACTAATAGCCTAATGGTTTGCGGGTTACTTTTACAATTCTGTTGGTGGTATCCTTTTGGTTTCCCAGAATTAACTTGCTGATAATACTTAACCTTTATAATGCAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAGGTTCTGCACTCCGATAAATGCTGTCTTAATATATAATTTGGATAATACTAGAGATTCTCGTGCTAACACATCTGTTCTATCCATGTAGGCCTGCAATTTTCTAGAT</genome_strand>
        <mrna_strand>GCACGA-GGTGACATATATG......................................................................................GTCCATGGAAGCGAAAAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAG.......................................................................................................CTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCA..............................................................................GTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAG........................................................................................................................................................................................................................................................................................................................................................................................GGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAG........................................................................................GCCTGCAATTTTCTAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E550502" ref_strand="+" ref_description="SGN-E550502 [TUS-6-F16]">
      <seq>tttatacccaatttttcaagaatttcattttatacgattgctttgtcacgttgtgagttcaaggcagtggccgtcaatatctcgttatagagcttcagtgcgcactcaatctcctaaagtggagatgattgataacatatttaaaaaagtttcagacactgatgatgatgggattatgagggaacttttgctagatttttatgtgagttccgggaaaaggaagcctgagcacattatagtattcaggtgatctaacccagcctgttcaccattttgctttcagcaaattatatacattctaagtgctattgctcttttattgacactacacttgtgatgaatgtctaaatcttcagaaatttttattgagcatgacattggtgagtttttatggttctacctcattttctgccatttttatcccgtttatctattgttttagaggattcatgtagctgacctaactcttgggcatgaggagtagctcttgatatttctcttgttccatcgtttgttgttattaccactaccgtgtgttccacctgcctaacattgtcacgtagcagtgaactttgtacacttctttgacggttttgctattggccccttttgaaaatgtcagggatggtgtcagtgaatctcaatttaatcgagttctaaacatagaactggaccagctcattgaggcctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="106053" stop="104233"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105753" g_stop="105573" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="180" r_length="180" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="105039" g_stop="104534" g_length="506"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="686" r_length="506" r_score="0.998"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88">
            <donor d_prob="0.946" d_score="0.98"/>
            <acceptor a_prob="0.929" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104445" g_stop="104440" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="687" r_stop="692" r_length="6" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E550502" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E550502" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105753" e_stop="105573"/>
          <exon e_start="105039" e_stop="104534"/>
          <exon e_start="104445" e_stop="104440"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTATACCCAATTTTTCAAAGAATTTCATTTTATACGATTGCTTTGTCAGGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAGGTGAGTTTGGTTTTTGTAGGTTTAACTTTATCTTGGATTGTTTTCTATTGGGTCAGGGTGAATTAACATTGGCCGTTCAGAACTTAATCTTATATGATAGAGTATGCTATGCTTTCTAACATATACATTTTGATCTTTGAGTCGCTTTAGCTGCACTGGAGATGAATTTATTTTTGTGGTGATATTTACATTTTGCATTTCGACTCTTGAGGGAGTTGCTTCACCAGAATTGTGATGCCTTAATACTTTGTTAGTATGGATTGAGTTTCTTCATGCCGAATGAGCTCCTCACTCAAATACCACTGGTTCCGTGATTTTCTGTATAATCCATACCCAGCTGTATTGCACATCTTTCTAATCAGTATATTATGCATTTTAAAGTTCGTTTTCTCTTTCCAATGGTTTGCTGCTATTTCTTATGGTTTAAAACTAATAGCCTAATGGTTTGCGGGTTACTTTTACAATTCTGTTGGTGGTATCCTTTTGGTTTCCCAGAATTAACTTGCTGATAATACTTAACCTTTATAATGCAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAGGTTCTGCACTCCGATAAATGCTGTCTTAATATATAATTTGGATAATACTAGAGATTCTCGTGCTAACACATCTGTTCTATCCATGTAGGCCTGC</genome_strand>
        <mrna_strand>TTTATACCCAATTTTTC-AAGAATTTCATTTTATACGATTGCTTTGTCACGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCGAGTTCTAAACATAGAACTGGACCAGCTCATTGAG........................................................................................GCCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E246332" ref_strand="+" ref_description="SGN-E246332 [cLEF-40-F20]">
      <seq>aagcgaaaaaatctgggggatcatggcatcaagactcaatgcttggctcctggaagagttaatgatcagtatctcacaaaccttctccttaagatcaatgctcagctgggtggtctaaattctatgttagctgcggagatttctccttccatccccatggtatctaaggtccccaccatgattcttggaatggacgtatcacatggctctcccggccagtctgatgttccatcaattgctgcagttgtgagttcaaggcagtggccgtcaatatctcgttatagagcttcagtgcgcactcaatctcctaaagtggagatgattgataacatatttaaaaaagtttcagacactgatgatgatgggattatgagggaacttttgctagatttttatgtgagttccgggaaaaggaagcctgagcacattatagtattcaaggatggtgtcagtgaatctcaatttaatcaagttctaaacatagaactggaccagctcattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="106427" stop="2140"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106127" g_stop="106023" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="0.924"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106022" i_stop="105920" i_length="103">
            <donor d_prob="0.974" d_score="0.98"/>
            <acceptor a_prob="0.773" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="105919" g_stop="105782" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="243" r_length="138" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="105781" i_stop="105704" i_length="78">
            <donor d_prob="0.865" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="105703" g_stop="105573" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="244" r_stop="374" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="105039" g_stop="104974" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="440" r_length="66" r_score="0.985"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="104973" i_stop="104598" i_length="376">
            <donor d_prob="0.980" d_score="0.98"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="104597" g_stop="104535" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="503" r_length="63" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E246332" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246332" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106127" e_stop="106023"/>
          <exon e_start="105919" e_stop="105782"/>
          <exon e_start="105703" e_stop="105573"/>
          <exon e_start="105039" e_stop="104974"/>
          <exon e_start="104597" e_stop="104535"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCGAAAAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAGGTGAGAGTTCTCTGTGCATCTGGTTCAGTGCTATCATCCTGGCACCTTACTTTCTTCCATCATTTCCTGGATCAGTCTTAAACATCACAGTTTCTGTTGGCAGCTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCAGTAGGTTCTTTCATTGACGTTGCTTACCTTTATACCCAATTTTTCAAAGAATTTCATTTTATACGATTGCTTTGTCAGGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAGGTGAGTTTGGTTTTTGTAGGTTTAACTTTATCTTGGATTGTTTTCTATTGGGTCAGGGTGAATTAACATTGGCCGTTCAGAACTTAATCTTATATGATAGAGTATGCTATGCTTTCTAACATATACATTTTGATCTTTGAGTCGCTTTAGCTGCACTGGAGATGAATTTATTTTTGTGGTGATATTTACATTTTGCATTTCGACTCTTGAGGGAGTTGCTTCACCAGAATTGTGATGCCTTAATACTTTGTTAGTATGGATTGAGTTTCTTCATGCCGAATGAGCTCCTCACTCAAATACCACTGGTTCCGTGATTTTCTGTATAATCCATACCCAGCTGTATTGCACATCTTTCTAATCAGTATATTATGCATTTTAAAGTTCGTTTTCTCTTTCCAATGGTTTGCTGCTATTTCTTATGGTTTAAAACTAATAGCCTAATGGTTTGCGGGTTACTTTTACAATTCTGTTGGTGGTATCCTTTTGGTTTCCCAGAATTAACTTGCTGATAATACTTAACCTTTATAATGCAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGA</genome_strand>
        <mrna_strand>AAGCGAAAAAATCTGGGGGATCATGGCATCAAGACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTCAG.......................................................................................................CTGGGTGGTCTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCA..............................................................................GTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAA........................................................................................................................................................................................................................................................................................................................................................................................GGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E246864" ref_strand="+" ref_description="SGN-E246864 [cLEF-41-K18]">
      <seq>ttatacccaatttttcaaagaatttcattttatacgattgctttgtcaggttgtgagttcaaggcagtggccgtcaatatctcgttatagagcttcagtgcgcactcaatctcctaaagtggagatgattgataacatatttaaaaaagtttcagacactgatgatgatgggattatgagggaacttttgctagatttttatgtgagttccgggaaaaggaagcctgagcacattatagtattcaggtgatctaacccagcctgttcaccattttgctttcagcaaattatatacattctaagtgctattgctcttttattgacactacacttgtgatgaatgtctaaatcttcagaaatttttattgagcatgacattggtgagtttttatggttctacctcattttctgccatttttatcccgtttatctattgttttagaggattcatgtagctgacctaactcttgggcatgaggagtagctcttgatatttctcttgttccatcgtttgttgttattaccactac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="106052" stop="104390"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105752" g_stop="105573" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="180" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="105039" g_stop="104690" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="530" r_length="350" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E246864" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246864" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105752" e_stop="105573"/>
          <exon e_start="105039" e_stop="104690"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATACCCAATTTTTCAAAGAATTTCATTTTATACGATTGCTTTGTCAGGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAGGTGAGTTTGGTTTTTGTAGGTTTAACTTTATCTTGGATTGTTTTCTATTGGGTCAGGGTGAATTAACATTGGCCGTTCAGAACTTAATCTTATATGATAGAGTATGCTATGCTTTCTAACATATACATTTTGATCTTTGAGTCGCTTTAGCTGCACTGGAGATGAATTTATTTTTGTGGTGATATTTACATTTTGCATTTCGACTCTTGAGGGAGTTGCTTCACCAGAATTGTGATGCCTTAATACTTTGTTAGTATGGATTGAGTTTCTTCATGCCGAATGAGCTCCTCACTCAAATACCACTGGTTCCGTGATTTTCTGTATAATCCATACCCAGCTGTATTGCACATCTTTCTAATCAGTATATTATGCATTTTAAAGTTCGTTTTCTCTTTCCAATGGTTTGCTGCTATTTCTTATGGTTTAAAACTAATAGCCTAATGGTTTGCGGGTTACTTTTACAATTCTGTTGGTGGTATCCTTTTGGTTTCCCAGAATTAACTTGCTGATAATACTTAACCTTTATAATGCAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTAC</genome_strand>
        <mrna_strand>TTATACCCAATTTTTCAAAGAATTTCATTTTATACGATTGCTTTGTCAGGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E707575" ref_strand="+" ref_description="SGN-E707575 [FA33BF02]">
      <seq>cgctccagctgttgtcagagttgacaaaatgtttgaagagatccagtcaaaacttcctggtgcccccaagtttcttctctgtcttcttcctgagaggaaaaattgtgacatatatggtccatggaagcgaaaaaatctggctgatcatggtatagtaactcaatgcttggctcctggaagagttaatgatcagtatctcacaaaccttctccttaagatcaatgctaagcttggtggtttaaattctatgttagctgcggagatttctccttccatccccatggtatctaaggtccccaccatgattcttggaatggacgtatcacatggctctcccggccagtctgatgttccatcaattgctgcagttgtgagttcaaggcagtggccgtcaatatctcgttatagagcttcagtgcgcactcaatctcctaaagtggagatgattgataacatatttaaaaaagtttcagacactgatgatgatgggattatgagggaacttttgctagatttttatgtgagttccgggaaaaggaagcctgagcacattatagtattcaggtgatctaacccagcctgttcaccattttgctttcagcaaattatatacattctaagtgctattgctcttttattgacactacacttgtgatgaatgtctaaatcttcagaaatttttattgagcatgacattggtgagtttttatggttctacctcattttctgccatttttatcccgtttatctattgttttagaggattcatgtagctgacctaactcttgggcatgaggagtagctcttgatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="106636" stop="104426"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106337" g_stop="106222" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106221" i_stop="106136" i_length="86">
            <donor d_prob="0.742" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106135" g_stop="106023" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="229" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106022" i_stop="105920" i_length="103">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="105919" g_stop="105782" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="367" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="105781" i_stop="105704" i_length="78">
            <donor d_prob="0.865" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="105703" g_stop="105573" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="498" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="105039" g_stop="104726" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="499" r_stop="812" r_length="314" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E707575" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>812</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707575" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106337" e_stop="106222"/>
          <exon e_start="106135" e_stop="106023"/>
          <exon e_start="105919" e_stop="105782"/>
          <exon e_start="105703" e_stop="105573"/>
          <exon e_start="105039" e_stop="104726"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTCCACCTGTTGTCAGAGTTGACAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGGTGCCCCCAAGTTTCTTCTCTGTCTTCTTCCTGAGAGGAAAAATTGTGACATATATGGTTAGTCCGATTTGCTTGTTCTGTTGACCACTAAGCTTATCTCATAAGTACTAATTACTAAAACAATTGACTGATGAAACTTGAAGGTCCATGGAAGCGAAAAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAGGTGAGAGTTCTCTGTGCATCTGGTTCAGTGCTATCATCCTGGCACCTTACTTTCTTCCATCATTTCCTGGATCAGTCTTAAACATCACAGTTTCTGTTGGCAGCTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCAGTAGGTTCTTTCATTGACGTTGCTTACCTTTATACCCAATTTTTCAAAGAATTTCATTTTATACGATTGCTTTGTCAGGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAGGTGAGTTTGGTTTTTGTAGGTTTAACTTTATCTTGGATTGTTTTCTATTGGGTCAGGGTGAATTAACATTGGCCGTTCAGAACTTAATCTTATATGATAGAGTATGCTATGCTTTCTAACATATACATTTTGATCTTTGAGTCGCTTTAGCTGCACTGGAGATGAATTTATTTTTGTGGTGATATTTACATTTTGCATTTCGACTCTTGAGGGAGTTGCTTCACCAGAATTGTGATGCCTTAATACTTTGTTAGTATGGATTGAGTTTCTTCATGCCGAATGAGCTCCTCACTCAAATACCACTGGTTCCGTGATTTTCTGTATAATCCATACCCAGCTGTATTGCACATCTTTCTAATCAGTATATTATGCATTTTAAAGTTCGTTTTCTCTTTCCAATGGTTTGCTGCTATTTCTTATGGTTTAAAACTAATAGCCTAATGGTTTGCGGGTTACTTTTACAATTCTGTTGGTGGTATCCTTTTGGTTTCCCAGAATTAACTTGCTGATAATACTTAACCTTTATAATGCAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATAT</genome_strand>
        <mrna_strand>CGCTCCAGCTGTTGTCAGAGTTGACAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGGTGCCCCCAAGTTTCTTCTCTGTCTTCTTCCTGAGAGGAAAAATTGTGACATATATG......................................................................................GTCCATGGAAGCGAAAAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAG.......................................................................................................CTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCA..............................................................................GTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E472282" ref_strand="+" ref_description="SGN-E472282 [cSTB-28-O11]">
      <seq>attgtgacatatatggaccatggaagcggaaaaatctggctgatcatggtatagtaacccaatgcttggctcctggaagagttaatgatcagtatctcacaaaccttctccttaagatcaatgctaagctcggtggtttaaattctatgttagctgcggaagtttctccttccatccccatggtatctaaggtccccaccatgattcttggaatggacgtatcacatggctctcccggccagtctgatgtcccatcaattgctgcagttgtgagttcaaggcagtggccgtcaatatctcgttatagagcttccgtgcgcactcaatctcctaaagtagagatgattgataacatatttaaaaaagtttcagacactgaggatgatgggattatgagggaacttttgctagatttttatgtgagttccgggaaaaggaagcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="106452" stop="104695"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106236" g_stop="106222" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="15" r_length="15" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106221" i_stop="106136" i_length="86">
            <donor d_prob="0.742" d_score="0.00"/>
            <acceptor a_prob="0.955" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106135" g_stop="106023" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="128" r_length="113" r_score="0.973"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106022" i_stop="105920" i_length="103">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="105919" g_stop="105782" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="266" r_length="138" r_score="0.971"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="105781" i_stop="105704" i_length="78">
            <donor d_prob="0.865" d_score="0.98"/>
            <acceptor a_prob="0.942" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="105703" g_stop="105573" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="397" r_length="131" r_score="0.977"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="105039" g_stop="104995" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="442" r_length="45" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E472282" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>442</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E472282" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106236" e_stop="106222"/>
          <exon e_start="106135" e_stop="106023"/>
          <exon e_start="105919" e_stop="105782"/>
          <exon e_start="105703" e_stop="105573"/>
          <exon e_start="105039" e_stop="104995"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGTGACATATATGGTTAGTCCGATTTGCTTGTTCTGTTGACCACTAAGCTTATCTCATAAGTACTAATTACTAAAACAATTGACTGATGAAACTTGAAGGTCCATGGAAGCGAAAAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAGGTGAGAGTTCTCTGTGCATCTGGTTCAGTGCTATCATCCTGGCACCTTACTTTCTTCCATCATTTCCTGGATCAGTCTTAAACATCACAGTTTCTGTTGGCAGCTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCAGTAGGTTCTTTCATTGACGTTGCTTACCTTTATACCCAATTTTTCAAAGAATTTCATTTTATACGATTGCTTTGTCAGGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAGGTGAGTTTGGTTTTTGTAGGTTTAACTTTATCTTGGATTGTTTTCTATTGGGTCAGGGTGAATTAACATTGGCCGTTCAGAACTTAATCTTATATGATAGAGTATGCTATGCTTTCTAACATATACATTTTGATCTTTGAGTCGCTTTAGCTGCACTGGAGATGAATTTATTTTTGTGGTGATATTTACATTTTGCATTTCGACTCTTGAGGGAGTTGCTTCACCAGAATTGTGATGCCTTAATACTTTGTTAGTATGGATTGAGTTTCTTCATGCCGAATGAGCTCCTCACTCAAATACCACTGGTTCCGTGATTTTCTGTATAATCCATACCCAGCTGTATTGCACATCTTTCTAATCAGTATATTATGCATTTTAAAGTTCGTTTTCTCTTTCCAATGGTTTGCTGCTATTTCTTATGGTTTAAAACTAATAGCCTAATGGTTTGCGGGTTACTTTTACAATTCTGTTGGTGGTATCCTTTTGGTTTCCCAGAATTAACTTGCTGATAATACTTAACCTTTATAATGCAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCC</genome_strand>
        <mrna_strand>ATTGTGACATATATG......................................................................................GACCATGGAAGCGGAAAAATCTGGCTGATCATGGTATAGTAACCCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAG.......................................................................................................CTCGGTGGTTTAAATTCTATGTTAGCTGCGGAAGTTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTCCCATCAATTGCTGCA..............................................................................GTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCCGTGCGCACTCAATCTCCTAAAGTAGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGAGGATGATGGGATTATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E337292" ref_strand="+" ref_description="SGN-E337292 [cTOE-7-B20]">
      <seq>tcagagttgacaaaatgtttgaagagatccagtcaaaacttcctggtgcccccaagtttcttctctgtcttcttcctgagaggaaaaattgtgacatatatggtccatggaagcgaaaaaatctggctgatcatggtatagtaactcaatgcttggctcctggaagagttaatgatcagtatctcacaaaccttctccttaagatcaatgctaagcttggtggtttaaattctatgttagctgcggagatttctccttccatccccatggtatctaaggtccccaccatgattcttggaatggacgtatcacatggctctcccggccagtctgatgttccatcaattgctgcagttgtgagttcaaggcagtggccgtcaatatctcgttatagagcttcagtgcgcactcaatctcctaaagtggagatgattgataacatatttaaaaaagtttcagacactgatgatgatgggattatgagggaacttttgctagatttttatgtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="106623" stop="104714"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106323" g_stop="106222" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="102" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106221" i_stop="106136" i_length="86">
            <donor d_prob="0.742" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106135" g_stop="106023" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="215" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106022" i_stop="105920" i_length="103">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="105919" g_stop="105782" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="353" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="105781" i_stop="105704" i_length="78">
            <donor d_prob="0.865" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="105703" g_stop="105573" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="484" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="105039" g_stop="105014" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="510" r_length="26" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E337292" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>510</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E337292" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106323" e_stop="106222"/>
          <exon e_start="106135" e_stop="106023"/>
          <exon e_start="105919" e_stop="105782"/>
          <exon e_start="105703" e_stop="105573"/>
          <exon e_start="105039" e_stop="105014"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGAGTTGACAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGGTGCCCCCAAGTTTCTTCTCTGTCTTCTTCCTGAGAGGAAAAATTGTGACATATATGGTTAGTCCGATTTGCTTGTTCTGTTGACCACTAAGCTTATCTCATAAGTACTAATTACTAAAACAATTGACTGATGAAACTTGAAGGTCCATGGAAGCGAAAAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAGGTGAGAGTTCTCTGTGCATCTGGTTCAGTGCTATCATCCTGGCACCTTACTTTCTTCCATCATTTCCTGGATCAGTCTTAAACATCACAGTTTCTGTTGGCAGCTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCAGTAGGTTCTTTCATTGACGTTGCTTACCTTTATACCCAATTTTTCAAAGAATTTCATTTTATACGATTGCTTTGTCAGGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAGGTGAGTTTGGTTTTTGTAGGTTTAACTTTATCTTGGATTGTTTTCTATTGGGTCAGGGTGAATTAACATTGGCCGTTCAGAACTTAATCTTATATGATAGAGTATGCTATGCTTTCTAACATATACATTTTGATCTTTGAGTCGCTTTAGCTGCACTGGAGATGAATTTATTTTTGTGGTGATATTTACATTTTGCATTTCGACTCTTGAGGGAGTTGCTTCACCAGAATTGTGATGCCTTAATACTTTGTTAGTATGGATTGAGTTTCTTCATGCCGAATGAGCTCCTCACTCAAATACCACTGGTTCCGTGATTTTCTGTATAATCCATACCCAGCTGTATTGCACATCTTTCTAATCAGTATATTATGCATTTTAAAGTTCGTTTTCTCTTTCCAATGGTTTGCTGCTATTTCTTATGGTTTAAAACTAATAGCCTAATGGTTTGCGGGTTACTTTTACAATTCTGTTGGTGGTATCCTTTTGGTTTCCCAGAATTAACTTGCTGATAATACTTAACCTTTATAATGCAGGGAACTTTTGCTAGATTTTTATGTGA</genome_strand>
        <mrna_strand>TCAGAGTTGACAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGGTGCCCCCAAGTTTCTTCTCTGTCTTCTTCCTGAGAGGAAAAATTGTGACATATATG......................................................................................GTCCATGGAAGCGAAAAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAG.......................................................................................................CTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCA..............................................................................GTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTTGCTAGATTTTTATGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E700707" ref_strand="+" ref_description="SGN-E700707 [FA13DG04]">
      <seq>cctttcagagggcttccttggtggagaagtccaggcaaaagcctcaggagagaatgcaaattttgagcaatgctctcaaaatcaacaattatgatgctgagcctctgcttcgttcttctggtgtctcaatcagtagcaacttcacccaggttgacgggcgcgtactgcctgctcctaagttgaaggctggaaatggagatgaccttttcacccggaatggaaggtggaactttaataataagagattctttgagccagcaaaggtagagcgttgggctgttgtgaacttttctgcacgctgtgatgtccgtggtctagtcagagatttgacaagacttggagagacgaagggaattagtgtggaagctccatttgaagtgtttgaagagtctccacagcttagaagggctccacctgttgtcagagttgacaaaatgtttgaagagatccagtcaaaacttcctggtgcccccaagtttcttctctgtcttcttcctgagaggaaaaattgtgacatatatggtccatggaagcgaaaaaatctggctgatcatggtatagtaactcaatgcttggctcctggaagagttaatgatcagtatctcacaaaccttctccttaagatcaatgctaagcttggtggtttaaattctatgttagctgcggagatttctccttccatccccatggtatctaaggtccccaccatgattcttggaatggacgtatcacatggctctcccggccagtctgatgttccatcaattgctgcagttgtgagttcaaggcagtggccgtcaatatctcgttatagagcttcagtgcgcactcaatctcctaaagtggagatgattgataacatatttaaaaaagtttcagacactgatgatgatggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="107458" stop="105281"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107158" g_stop="107088" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107087" i_stop="107011" i_length="77">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107010" g_stop="106903" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="179" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106902" i_stop="106818" i_length="85">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106817" g_stop="106755" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="242" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="106754" i_stop="106578" i_length="177">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106577" g_stop="106464" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="356" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="106463" i_stop="106388" i_length="76">
            <donor d_prob="0.537" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106387" g_stop="106222" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="522" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106221" i_stop="106136" i_length="86">
            <donor d_prob="0.742" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106135" g_stop="106023" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="635" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="106022" i_stop="105920" i_length="103">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="105919" g_stop="105782" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="636" r_stop="773" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="105781" i_stop="105704" i_length="78">
            <donor d_prob="0.865" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="105703" g_stop="105581" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="774" r_stop="896" r_length="123" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E700707" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>896</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E700707" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107158" e_stop="107088"/>
          <exon e_start="107010" e_stop="106903"/>
          <exon e_start="106817" e_stop="106755"/>
          <exon e_start="106577" e_stop="106464"/>
          <exon e_start="106387" e_stop="106222"/>
          <exon e_start="106135" e_stop="106023"/>
          <exon e_start="105919" e_stop="105782"/>
          <exon e_start="105703" e_stop="105581"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTTCAGAGGGCTTCCTTGGTGGAGAAGTCCAGGCAAAAGCCTCAGGAGAGAATGCAAATTTTGAGCAATGTAGGTCTCTTCTATCCTAACATAATCTTTTGCTTGCTCTAGTTATACTTAACTAATTTCCTACTGGATTGTGGAAGGCTCTCAAAATCAACAATTATGATGCTGAGCCTCTGCTTCGTTCTTCTGGTGTCTCAATCAGTAGCAACTTCACCCAGGTTGACGGGCGCGTACTGCCTGCTCCTAAGGTATGCTATCTATTATAACTTCTTTTAGCTATATTTTTGAGTCTTTATGTAGTGAGTTTGAGGTAATATATTCTTTATGTGGCAGTTGAAGGCTGGAAATGGAGATGACCTTTTCACCCGGAATGGAAGGTGGAACTTTAATAATAAGGTATAGTTGAACTCTTCTTCACATATGATTTTTCCGCAGGATCTATGGGGTTCATCTCATAATCTCATTTAAGATGATATTGGCTTTGAAATCGTATGATGACATGCTAGCTTGGTATTGCAGTGTAGTGGTTGTTAAGATGTGCTTTGAGTTTTTTTCATTTCATCTATTCTGCAGAGATTCTTTGAGCCAGCAAAGGTAGAGCGTTGGGCTGTTGTGAACTTTTCTGCACGCTGTGATGTCCGTGGTCTAGTCAGAGATTTGACAAGACTTGGAGAGACGAAGGGAATTGTATGTTTTATCAACTTCTGATACTTAAAAACTGAGAAGGAAGGACGATTTCATTATTCCTGTTTTAACGTTACAGAGTGTGGAAGCTCCATTTGAAGTGTTTGAAGAGTCTCCACAGCTTAGAAGGGCTCCACCTGTTGTCAGAGTTGACAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGGTGCCCCCAAGTTTCTTCTCTGTCTTCTTCCTGAGAGGAAAAATTGTGACATATATGGTTAGTCCGATTTGCTTGTTCTGTTGACCACTAAGCTTATCTCATAAGTACTAATTACTAAAACAATTGACTGATGAAACTTGAAGGTCCATGGAAGCGAAAAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAGGTGAGAGTTCTCTGTGCATCTGGTTCAGTGCTATCATCCTGGCACCTTACTTTCTTCCATCATTTCCTGGATCAGTCTTAAACATCACAGTTTCTGTTGGCAGCTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCAGTAGGTTCTTTCATTGACGTTGCTTACCTTTATACCCAATTTTTCAAAGAATTTCATTTTATACGATTGCTTTGTCAGGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGG</genome_strand>
        <mrna_strand>CCTTTCAGAGGGCTTCCTTGGTGGAGAAGTCCAGGCAAAAGCCTCAGGAGAGAATGCAAATTTTGAGCAAT.............................................................................GCTCTCAAAATCAACAATTATGATGCTGAGCCTCTGCTTCGTTCTTCTGGTGTCTCAATCAGTAGCAACTTCACCCAGGTTGACGGGCGCGTACTGCCTGCTCCTAAG.....................................................................................TTGAAGGCTGGAAATGGAGATGACCTTTTCACCCGGAATGGAAGGTGGAACTTTAATAATAAG.................................................................................................................................................................................AGATTCTTTGAGCCAGCAAAGGTAGAGCGTTGGGCTGTTGTGAACTTTTCTGCACGCTGTGATGTCCGTGGTCTAGTCAGAGATTTGACAAGACTTGGAGAGACGAAGGGAATT............................................................................AGTGTGGAAGCTCCATTTGAAGTGTTTGAAGAGTCTCCACAGCTTAGAAGGGCTCCACCTGTTGTCAGAGTTGACAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGGTGCCCCCAAGTTTCTTCTCTGTCTTCTTCCTGAGAGGAAAAATTGTGACATATATG......................................................................................GTCCATGGAAGCGAAAAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAG.......................................................................................................CTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCA..............................................................................GTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E278487" ref_strand="-" ref_description="SGN-E278487 [cLEL-2-I18](-)">
      <seq>gcacgaggtgacatatatggtccatggaagcgattaaatctggctgatcatggtatagtaactcaatgcttggctcctggcccagttaccgatcagtatctcacaaaccttctccttaagatcaatgctaagcttggtggtttaaattctatgttagctgcggagatttctccttccatccccatggtatctaaggtccccaccatgattcttggaatggacgtatcacatggctctcccggcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="106449" stop="105508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106241" g_stop="106222" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="19" r_length="19" r_score="0.750"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106221" i_stop="106136" i_length="86">
            <donor d_prob="0.742" d_score="0.00"/>
            <acceptor a_prob="0.955" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106135" g_stop="106023" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="132" r_length="113" r_score="0.938"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106022" i_stop="105920" i_length="103">
            <donor d_prob="0.974" d_score="0.94"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="105919" g_stop="105808" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="244" r_length="112" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E278487" ref_strand="-">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>245</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E278487" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="106241" e_stop="106222"/>
          <exon e_start="106135" e_stop="106023"/>
          <exon e_start="105919" e_stop="105808"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAATTGTGACATATATGGTTAGTCCGATTTGCTTGTTCTGTTGACCACTAAGCTTATCTCATAAGTACTAATTACTAAAACAATTGACTGATGAAACTTGAAGGTCCATGGAAGCGAAAAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAGGTGAGAGTTCTCTGTGCATCTGGTTCAGTGCTATCATCCTGGCACCTTACTTTCTTCCATCATTTCCTGGATCAGTCTTAAACATCACAGTTTCTGTTGGCAGCTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCC</genome_strand>
        <mrna_strand>GCACGA-GGTGACATATATG......................................................................................GTCCATGGAAGCGATTAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGCCCAGTTACCGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAG.......................................................................................................CTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E543443" ref_strand="+" ref_description="SGN-E543443 [TUS-65-E5]">
      <seq>gcgaaaaaccttgtcgtgagcagatgtttactctaaagcagaagagcaaagatgaggatggtgaagtgcaaacttcagaagtgactgtttatgattactttgttaatcatcgtaacatagacttgcgatattctgccgatttgccgtgcctcaatgttggaaagcctaaacgtcctacctatttccccattgagctctgcactttggtctcattgcaaaggtacacaaaagccttgtccacctttcagagggcttccttggtggagaagtccaggcaaaagcctcaggagagaatgcaaattttgagcaatgctctcaaaatcaacaattatgatgctgagcctctgcttcgttcttctggtgtctcaatcagtagcaacttcacccaggttgacgggcgcgtactgcctgctcctaagttgaaggctggaaatggagatgaccttttcacccggaatggaaggtggaactttaataataagagattctttgagccagcaaaggtagagcgttgggctgttgtgaacttttctgcacgctgtgatgtccgtggtctagtcagagatttgacaagacttggagagacgaagggaattagtgtggaagctccatttgaagtgtttgaagagtctccacagcttagaagggctccacctgttgtcagagttgacaaaatgtttgaagagatccagtcaaaacttcctggtgcccccaagtttcttctctgtcttcttcctgagaggaaaattgtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="107907" stop="105930"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107607" g_stop="107583" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107582" i_stop="107458" i_length="125">
            <donor d_prob="0.746" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107457" g_stop="107289" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="194" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107288" i_stop="107205" i_length="84">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107204" g_stop="107088" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="311" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107087" i_stop="107011" i_length="77">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107010" g_stop="106903" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="419" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="106902" i_stop="106818" i_length="85">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106817" g_stop="106755" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="482" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106754" i_stop="106578" i_length="177">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106464" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="596" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="106463" i_stop="106388" i_length="76">
            <donor d_prob="0.537" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="106387" g_stop="106230" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="597" r_stop="753" r_length="157" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E543443" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>754</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E543443" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107607" e_stop="107583"/>
          <exon e_start="107457" e_stop="107289"/>
          <exon e_start="107204" e_stop="107088"/>
          <exon e_start="107010" e_stop="106903"/>
          <exon e_start="106817" e_stop="106755"/>
          <exon e_start="106577" e_stop="106464"/>
          <exon e_start="106387" e_stop="106230"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGAAAAACCTTGTCGTGAGCAGATGTATGTTAGTAATGATCTATTTATTTCTACCTTGGCTCAACTAATACACACATGTGCAGGATGGTCAACATTGATTTGTTATAATGTAATGGGGCAAGCTCATTTTATTCTCTTGACATTTTTAGGTTTACTCTAAAGCAGAAGAGCAAAGATGAGGATGGTGAAGTGCAAACTTCAGAAGTGACTGTTTATGATTACTTTGTTAATCATCGTAACATAGACTTGCGATATTCTGCCGATTTGCCGTGCCTCAATGTTGGAAAGCCTAAACGTCCTACCTATTTCCCCATTGAGGTAAACATATTGAGTTAAAGTTAACCGTTTTTATGTACTGTCTTTTGTTCATGCAGTTTTGAATTCTTTTTTTGAATGTTACAGCTCTGCACTTTGGTCTCATTGCAAAGGTACACAAAAGCCTTGTCCACCTTTCAGAGGGCTTCCTTGGTGGAGAAGTCCAGGCAAAAGCCTCAGGAGAGAATGCAAATTTTGAGCAATGTAGGTCTCTTCTATCCTAACATAATCTTTTGCTTGCTCTAGTTATACTTAACTAATTTCCTACTGGATTGTGGAAGGCTCTCAAAATCAACAATTATGATGCTGAGCCTCTGCTTCGTTCTTCTGGTGTCTCAATCAGTAGCAACTTCACCCAGGTTGACGGGCGCGTACTGCCTGCTCCTAAGGTATGCTATCTATTATAACTTCTTTTAGCTATATTTTTGAGTCTTTATGTAGTGAGTTTGAGGTAATATATTCTTTATGTGGCAGTTGAAGGCTGGAAATGGAGATGACCTTTTCACCCGGAATGGAAGGTGGAACTTTAATAATAAGGTATAGTTGAACTCTTCTTCACATATGATTTTTCCGCAGGATCTATGGGGTTCATCTCATAATCTCATTTAAGATGATATTGGCTTTGAAATCGTATGATGACATGCTAGCTTGGTATTGCAGTGTAGTGGTTGTTAAGATGTGCTTTGAGTTTTTTTCATTTCATCTATTCTGCAGAGATTCTTTGAGCCAGCAAAGGTAGAGCGTTGGGCTGTTGTGAACTTTTCTGCACGCTGTGATGTCCGTGGTCTAGTCAGAGATTTGACAAGACTTGGAGAGACGAAGGGAATTGTATGTTTTATCAACTTCTGATACTTAAAAACTGAGAAGGAAGGACGATTTCATTATTCCTGTTTTAACGTTACAGAGTGTGGAAGCTCCATTTGAAGTGTTTGAAGAGTCTCCACAGCTTAGAAGGGCTCCACCTGTTGTCAGAGTTGACAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGGTGCCCCCAAGTTTCTTCTCTGTCTTCTTCCTGAGAGGAAAAATTGTGA</genome_strand>
        <mrna_strand>GCGAAAAACCTTGTCGTGAGCAGAT.............................................................................................................................GTTTACTCTAAAGCAGAAGAGCAAAGATGAGGATGGTGAAGTGCAAACTTCAGAAGTGACTGTTTATGATTACTTTGTTAATCATCGTAACATAGACTTGCGATATTCTGCCGATTTGCCGTGCCTCAATGTTGGAAAGCCTAAACGTCCTACCTATTTCCCCATTGAG....................................................................................CTCTGCACTTTGGTCTCATTGCAAAGGTACACAAAAGCCTTGTCCACCTTTCAGAGGGCTTCCTTGGTGGAGAAGTCCAGGCAAAAGCCTCAGGAGAGAATGCAAATTTTGAGCAAT.............................................................................GCTCTCAAAATCAACAATTATGATGCTGAGCCTCTGCTTCGTTCTTCTGGTGTCTCAATCAGTAGCAACTTCACCCAGGTTGACGGGCGCGTACTGCCTGCTCCTAAG.....................................................................................TTGAAGGCTGGAAATGGAGATGACCTTTTCACCCGGAATGGAAGGTGGAACTTTAATAATAAG.................................................................................................................................................................................AGATTCTTTGAGCCAGCAAAGGTAGAGCGTTGGGCTGTTGTGAACTTTTCTGCACGCTGTGATGTCCGTGGTCTAGTCAGAGATTTGACAAGACTTGGAGAGACGAAGGGAATT............................................................................AGTGTGGAAGCTCCATTTGAAGTGTTTGAAGAGTCTCCACAGCTTAGAAGGGCTCCACCTGTTGTCAGAGTTGACAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGGTGCCCCCAAGTTTCTTCTCTGTCTTCTTCCTGAGAGG-AAAATTGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E301434" ref_strand="+" ref_description="SGN-E301434 [cLEX-8-K20]">
      <seq>cgaaaaaccttgtcgtgagcagatgtttactctaaagcagaagagcaaagatgaggatggtgaagtgcaaacttcagaagtgactgtttatgattactttgttaatcatcgtaacatagacttgcgatattctgccgatttgccgtgcctcaatgttggaaagcctaaacgtcctacctatttccccattgagctctgcactttggtctcattgcaaaggtacacaaaagccttgtccacctttcagagggcttccttggtggagaagtccaggcaaaagcctcaggagagaatgcaaattttgagcaatgctctcaaaatcaacaattatgatgctgagcctctgcttcgttcttctggtgtctcaatcagtagcaacttcacccaggttgacgggcgcgtactgcctgctcctaagttgaaggctggaaatggagatgaccttttcacccggaatggaaggtggaactttaataataagag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="107906" stop="106455"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107606" g_stop="107583" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107582" i_stop="107458" i_length="125">
            <donor d_prob="0.746" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107457" g_stop="107289" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="193" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107288" i_stop="107205" i_length="84">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107204" g_stop="107088" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="310" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107087" i_stop="107011" i_length="77">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107010" g_stop="106903" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="418" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="106902" i_stop="106818" i_length="85">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106817" g_stop="106755" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="481" r_length="63" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E301434" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E301434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107606" e_stop="107583"/>
          <exon e_start="107457" e_stop="107289"/>
          <exon e_start="107204" e_stop="107088"/>
          <exon e_start="107010" e_stop="106903"/>
          <exon e_start="106817" e_stop="106755"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAAACCTTGTCGTGAGCAGATGTATGTTAGTAATGATCTATTTATTTCTACCTTGGCTCAACTAATACACACATGTGCAGGATGGTCAACATTGATTTGTTATAATGTAATGGGGCAAGCTCATTTTATTCTCTTGACATTTTTAGGTTTACTCTAAAGCAGAAGAGCAAAGATGAGGATGGTGAAGTGCAAACTTCAGAAGTGACTGTTTATGATTACTTTGTTAATCATCGTAACATAGACTTGCGATATTCTGCCGATTTGCCGTGCCTCAATGTTGGAAAGCCTAAACGTCCTACCTATTTCCCCATTGAGGTAAACATATTGAGTTAAAGTTAACCGTTTTTATGTACTGTCTTTTGTTCATGCAGTTTTGAATTCTTTTTTTGAATGTTACAGCTCTGCACTTTGGTCTCATTGCAAAGGTACACAAAAGCCTTGTCCACCTTTCAGAGGGCTTCCTTGGTGGAGAAGTCCAGGCAAAAGCCTCAGGAGAGAATGCAAATTTTGAGCAATGTAGGTCTCTTCTATCCTAACATAATCTTTTGCTTGCTCTAGTTATACTTAACTAATTTCCTACTGGATTGTGGAAGGCTCTCAAAATCAACAATTATGATGCTGAGCCTCTGCTTCGTTCTTCTGGTGTCTCAATCAGTAGCAACTTCACCCAGGTTGACGGGCGCGTACTGCCTGCTCCTAAGGTATGCTATCTATTATAACTTCTTTTAGCTATATTTTTGAGTCTTTATGTAGTGAGTTTGAGGTAATATATTCTTTATGTGGCAGTTGAAGGCTGGAAATGGAGATGACCTTTTCACCCGGAATGGAAGGTGGAACTTTAATAATAAG</genome_strand>
        <mrna_strand>CGAAAAACCTTGTCGTGAGCAGAT.............................................................................................................................GTTTACTCTAAAGCAGAAGAGCAAAGATGAGGATGGTGAAGTGCAAACTTCAGAAGTGACTGTTTATGATTACTTTGTTAATCATCGTAACATAGACTTGCGATATTCTGCCGATTTGCCGTGCCTCAATGTTGGAAAGCCTAAACGTCCTACCTATTTCCCCATTGAG....................................................................................CTCTGCACTTTGGTCTCATTGCAAAGGTACACAAAAGCCTTGTCCACCTTTCAGAGGGCTTCCTTGGTGGAGAAGTCCAGGCAAAAGCCTCAGGAGAGAATGCAAATTTTGAGCAAT.............................................................................GCTCTCAAAATCAACAATTATGATGCTGAGCCTCTGCTTCGTTCTTCTGGTGTCTCAATCAGTAGCAACTTCACCCAGGTTGACGGGCGCGTACTGCCTGCTCCTAAG.....................................................................................TTGAAGGCTGGAAATGGAGATGACCTTTTCACCCGGAATGGAAGGTGGAACTTTAATAATAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E458022" ref_strand="+" ref_description="SGN-E458022 [cPRO-4-M16]">
      <seq>cacaatgataatccagcctgggcctgtggttgactttctgatagcgaaccaaaatgcaaaagatcccttttcacttgattgggcgaaggcaaagcgcgtattgaagaacctgagagtgaagactgctcccgctaaccaagaattcaaaataactggattgagcgaaaaaccttgtcgtgagcagacgtttactctaaagcagaggagcaaagatgaggatggtgaagtgcagacttcagaagtgacagtttatgattactttgttaatcatcgtaacatagacttgcgatattctgctgatttgccgtgcctcaatggtggaaagcctaaacgtcccacctatttccccattgagctctgcactttggtctcattgcaaaggtacacaaaagccttgtccacctttcagagggcttccttggtggagaagtctaagcaaaagcctcaggagagaatggaaattttgagtaatgctctccaaatcaacaattatgatgctgagcctctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="108145" stop="106674"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107845" g_stop="107758" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107757" i_stop="107681" i_length="77">
            <donor d_prob="0.974" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107680" g_stop="107583" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="186" r_length="98" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107582" i_stop="107458" i_length="125">
            <donor d_prob="0.746" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107457" g_stop="107289" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="355" r_length="169" r_score="0.964"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107288" i_stop="107205" i_length="84">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107204" g_stop="107088" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="472" r_length="117" r_score="0.966"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107087" i_stop="107011" i_length="77">
            <donor d_prob="0.990" d_score="0.92"/>
            <acceptor a_prob="0.956" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="107010" g_stop="106974" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="509" r_length="37" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E458022" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E458022" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107845" e_stop="107758"/>
          <exon e_start="107680" e_stop="107583"/>
          <exon e_start="107457" e_stop="107289"/>
          <exon e_start="107204" e_stop="107088"/>
          <exon e_start="107010" e_stop="106974"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTATGATAATCCAACCTGGGCCTGTGGTCGACTTTCTGATAGCGAACCAAAATGCAAAAGATCCCTTTTCACTTGATTGGGCAAAGGTGTGCTGTTATATATTTGATTATTTATCTTTTTGTATAATCATGTTCTAAGCAATGTATTCTCTACACTTGATCAGGCAAAACGCGTGTTGAAGAACCTGCGAGTGAAGACTGCTCCCGCTAACCAAGAATTCAAAATAACTGGATTGAGCGAAAAACCTTGTCGTGAGCAGATGTATGTTAGTAATGATCTATTTATTTCTACCTTGGCTCAACTAATACACACATGTGCAGGATGGTCAACATTGATTTGTTATAATGTAATGGGGCAAGCTCATTTTATTCTCTTGACATTTTTAGGTTTACTCTAAAGCAGAAGAGCAAAGATGAGGATGGTGAAGTGCAAACTTCAGAAGTGACTGTTTATGATTACTTTGTTAATCATCGTAACATAGACTTGCGATATTCTGCCGATTTGCCGTGCCTCAATGTTGGAAAGCCTAAACGTCCTACCTATTTCCCCATTGAGGTAAACATATTGAGTTAAAGTTAACCGTTTTTATGTACTGTCTTTTGTTCATGCAGTTTTGAATTCTTTTTTTGAATGTTACAGCTCTGCACTTTGGTCTCATTGCAAAGGTACACAAAAGCCTTGTCCACCTTTCAGAGGGCTTCCTTGGTGGAGAAGTCCAGGCAAAAGCCTCAGGAGAGAATGCAAATTTTGAGCAATGTAGGTCTCTTCTATCCTAACATAATCTTTTGCTTGCTCTAGTTATACTTAACTAATTTCCTACTGGATTGTGGAAGGCTCTCAAAATCAACAATTATGATGCTGAGCCTCTGC</genome_strand>
        <mrna_strand>CACAATGATAATCCAGCCTGGGCCTGTGGTTGACTTTCTGATAGCGAACCAAAATGCAAAAGATCCCTTTTCACTTGATTGGGCGAAG.............................................................................GCAAAGCGCGTATTGAAGAACCTGAGAGTGAAGACTGCTCCCGCTAACCAAGAATTCAAAATAACTGGATTGAGCGAAAAACCTTGTCGTGAGCAGAC.............................................................................................................................GTTTACTCTAAAGCAGAGGAGCAAAGATGAGGATGGTGAAGTGCAGACTTCAGAAGTGACAGTTTATGATTACTTTGTTAATCATCGTAACATAGACTTGCGATATTCTGCTGATTTGCCGTGCCTCAATGGTGGAAAGCCTAAACGTCCCACCTATTTCCCCATTGAG....................................................................................CTCTGCACTTTGGTCTCATTGCAAAGGTACACAAAAGCCTTGTCCACCTTTCAGAGGGCTTCCTTGGTGGAGAAGTCTAAGCAAAAGCCTCAGGAGAGAATGGAAATTTTGAGTAAT.............................................................................GCTCTCCAAATCAACAATTATGATGCTGAGCCTCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E736032" ref_strand="+" ref_description="SGN-E736032 [LC04AD01]">
      <seq>cctcttcactctgtttcttcatccgccatttttgagctttagaagattgtggtaatggctgaagaagagaatggtggatccacagaggctctgcctcctcctccccctgttccacttaatttctctcctgcacaagctgaaccagagccagtgaagaagaaggttttacgtgttcccatggcaaggcgtggccttggaagcaagggacaaaagattccgatccttaccaatcactttaaagtgaacgtgtctaatgttgatggacacttctttcattacagtgttgccttattttatgaggatggtcgacctgtcgagggaaaaggcattggcagaaaagttctggatagagtgcatgaaacatatgatacagaattggctgggaaggattttgcatatgatggggagaagagtttgttcaccatcggttcactacctagaaataaactagagttcacagttgtactagatgacataacatctaatcggaacaacggtaccaatggcaactctagccctggcagacatggaagccctcctaatgaaactgataggaaaagattaaggcggccataccaatctaaaacttataaggtggagattagctttgctgccaagattccaatgcaggcgattgcaaatgctttgcgaggtcaagagtctgagaactctcaagaagccttgcgagttttggatataattttaaggcagcatgctgcaaaacagggttgtttacttgttcgtcaatcctttttccataatgatcctaagaactttgctgatgttggcggtggtgttctgggctgccgagggttccattcaagttttcgtaccacccagtcgggattgtcattgaacattgacgtgtctaccactatgataatccaacctgggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="109406" stop="107523"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109104" g_stop="108865" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="282" r_length="240" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108864" i_stop="108767" i_length="98">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108766" g_stop="108561" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="488" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108560" i_stop="108480" i_length="81">
            <donor d_prob="0.113" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108479" g_stop="108243" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="725" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108242" i_stop="108069" i_length="174">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.441" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="108068" g_stop="107932" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="726" r_stop="862" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107931" i_stop="107856" i_length="76">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="107855" g_stop="107823" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="863" r_stop="895" r_length="33" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E736032" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>853</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E736032" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109104" e_stop="108865"/>
          <exon e_start="108766" e_stop="108561"/>
          <exon e_start="108479" e_stop="108243"/>
          <exon e_start="108068" e_stop="107932"/>
          <exon e_start="107855" e_stop="107823"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGTGTATGTTTTCACATACCTCTCCTTGATATGCTCCTATCTTTTCTCTTCTCAATACAATCATGCAACTCCATGCCATTTTTAACAATATCTGATAACAGGTTGCCTTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCGGTTGGTTCTCAGAGGCTTAGTTTAATGTGTTCCCTAGTTCTTATTTTGGTTGTTTGACACTTTTTATCATCTTATATACAGGAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCATACCAATCTAAAACTTATAAGGTGGAGATTAGCTTTGCTGCCAAGATTCCAATGCAGGCGATTGCAAATGCTTTGCGAGGTCAAGAGTCTGAGAACTCTCAAGAAGCCTTGCGAGTTTTGGATATAATTTTAAGGCAGCATGCTGCAAAACAGTAAGTTATGTGTCTATTACTACAGAAGTATTTTTGTGCGCCTCTTGATTGTTACATAATGACTTTTCTTATATTGGGGGTTGTTTACTTGTTCGTCAATAGTTATGTGTCTATGACTACAGAAGTATTTTTGTGCCTCTCTTGATTGTTACATAATGACTATTCTTATATTAGGGGTTGTTTACTTGTTCGTCAATCCTTTTTCCATAATGATCCTAAGAACTTTGCTGATGTTGGCGGTGGTGTTCTGGGCTGCCGAGGGTTCCATTCAAGTTTTCGTACCACCCAGTCGGGATTGTCATTGAACATTGGTAAATATCTATCTTTCATGTTTCATACTTATCTCAAATGAAATGAGGTTCATATTTTGTGTTTCCTTGATCACAGACGTGTCTACCACTATGATAATCCAACCTGGGC</genome_strand>
        <mrna_strand>AAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGT..................................................................................................GTTGCCTTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCG.................................................................................GAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCATACCAATCTAAAACTTATAAGGTGGAGATTAGCTTTGCTGCCAAGATTCCAATGCAGGCGATTGCAAATGCTTTGCGAGGTCAAGAGTCTGAGAACTCTCAAGAAGCCTTGCGAGTTTTGGATATAATTTTAAGGCAGCATGCTGCAAAACA..............................................................................................................................................................................GGGTTGTTTACTTGTTCGTCAATCCTTTTTCCATAATGATCCTAAGAACTTTGCTGATGTTGGCGGTGGTGTTCTGGGCTGCCGAGGGTTCCATTCAAGTTTTCGTACCACCCAGTCGGGATTGTCATTGAACATTG............................................................................ACGTGTCTACCACTATGATAATCCAACCTGGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E452616" ref_strand="+" ref_description="SGN-E452616 [cSTS-17-K2]">
      <seq>ggatggtcgacctgtcgagggaaaaggaattggcagaaaagttctggatagagtgcatgaaacatatgatacagaattggccgggaaggattttgcatatgatggggagaagagtttgttcaccattggttcactacctagaaataaattagagttcacggttgtactagatgacataacatctaatcggaacaacgggaccaatggcaactccagccctggcagacatggaagccctcctaatgaaactgataggaagagattaaggcggccgtaccaatctaaaacttataaggtggagattagcttcgctgccaagattccaatgcaggcgattgcaaatgctttgcgaggtcaagagtctgagaactctcaagaagccttgcgagttttggatataattttaaggcagcatgctgcaaaacagggttgtttacttgttcggcaatcctttttccataatgacccaaagaactttgctgatgttggaggtggtgttcttggctgccganggttccattcgagttttcgaaccacccagtcgggattgtctttgaacattgacgtgtctaccacaaatgatatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="109049" stop="107632"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108749" g_stop="108561" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="189" r_length="189" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108560" i_stop="108480" i_length="81">
            <donor d_prob="0.113" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108479" g_stop="108243" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="426" r_length="237" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108242" i_stop="108069" i_length="174">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.441" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108068" g_stop="107932" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="563" r_length="137" r_score="0.934"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107931" i_stop="107856" i_length="76">
            <donor d_prob="0.990" d_score="0.94"/>
            <acceptor a_prob="0.979" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107855" g_stop="107837" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="564" r_stop="583" r_length="20" r_score="0.842"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E452616" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>582</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E452616" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108749" e_stop="108561"/>
          <exon e_start="108479" e_stop="108243"/>
          <exon e_start="108068" e_stop="107932"/>
          <exon e_start="107855" e_stop="107837"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCGGTTGGTTCTCAGAGGCTTAGTTTAATGTGTTCCCTAGTTCTTATTTTGGTTGTTTGACACTTTTTATCATCTTATATACAGGAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCATACCAATCTAAAACTTATAAGGTGGAGATTAGCTTTGCTGCCAAGATTCCAATGCAGGCGATTGCAAATGCTTTGCGAGGTCAAGAGTCTGAGAACTCTCAAGAAGCCTTGCGAGTTTTGGATATAATTTTAAGGCAGCATGCTGCAAAACAGTAAGTTATGTGTCTATTACTACAGAAGTATTTTTGTGCGCCTCTTGATTGTTACATAATGACTTTTCTTATATTGGGGGTTGTTTACTTGTTCGTCAATAGTTATGTGTCTATGACTACAGAAGTATTTTTGTGCCTCTCTTGATTGTTACATAATGACTATTCTTATATTAGGGGTTGTTTACTTGTTCGTCAATCCTTTTTCCATAATGATCCTAAGAACTTTGCTGATGTTGGCGGTGGTGTTCTGGGCTGCCGAGGGTTCCATTCAAGTTTTCGTACCACCCAGTCGGGATTGTCATTGAACATTGGTAAATATCTATCTTTCATGTTTCATACTTATCTCAAATGAAATGAGGTTCATATTTTGTGTTTCCTTGATCACAGACGTGTCTACCAC-TATGAT</genome_strand>
        <mrna_strand>GGATGGTCGACCTGTCGAGGGAAAAGGAATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCCGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATTGGTTCACTACCTAGAAATAAATTAGAGTTCACGGTTGTACTAGATGACATAACATCTAATCG.................................................................................GAACAACGGGACCAATGGCAACTCCAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAGAGATTAAGGCGGCCGTACCAATCTAAAACTTATAAGGTGGAGATTAGCTTCGCTGCCAAGATTCCAATGCAGGCGATTGCAAATGCTTTGCGAGGTCAAGAGTCTGAGAACTCTCAAGAAGCCTTGCGAGTTTTGGATATAATTTTAAGGCAGCATGCTGCAAAACA..............................................................................................................................................................................GGGTTGTTTACTTGTTCGGCAATCCTTTTTCCATAATGACCCAAAGAACTTTGCTGATGTTGGAGGTGGTGTTCTTGGCTGCCGANGGTTCCATTCGAGTTTTCGAACCACCCAGTCGGGATTGTCTTTGAACATTG............................................................................ACGTGTCTACCACAAATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E702593" ref_strand="+" ref_description="SGN-E702593 [FA19AF07]">
      <seq>gagctttagaagattgtggtaatggctgaagaagagaatggtggatccacagaggctctgcctcctcctccccctgttccacttaatttctctcctgcacaagctgaaccagagccagtgaagaagaaggttttacgtgttcccatggcaaggcgtggccttggaagcaagggacaaaagattccgatccttaccaatcactttaaagtgaacgtgtctaatgttgatggacacttctttcattacagtgttgccttattttatgaggatggtcgacctgtcgagggaaaaggcattggcagaaaagttctggatagagtgcatgaaacatatgatacagaattggctgggaaggattttgcatatgatggggagaagagtttgttcaccatcggttcactacctagaaataaactagagttcacagttgtactagatgacataacatctaatcggaacaacggtaccaatggcaactctagccctggcagacatggaagccctcctaatgaaactgataggaaaagattaaggcggccataccaatctaaaacttataaggtggagattagctttgctgccaagattccaatgcaggcgattgcaaatgctttgcgaggtcaagagtctgagaactctcaagaagccttgcgagttttggatataattttaaggcagcatgctgcaaaacagggttgtttacttgttcgtcaatcctttttccataatgatcctaagaactttgctgatgttggcggtggtgttctgggctgccgagggttccattcaagttttcgtaccacccagtcgggattgtcattgaacattgacgtgtcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="109406" stop="107632"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109104" g_stop="108865" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="249" r_length="240" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108864" i_stop="108767" i_length="98">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108766" g_stop="108561" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="455" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108560" i_stop="108480" i_length="81">
            <donor d_prob="0.113" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108479" g_stop="108243" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="692" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108242" i_stop="108069" i_length="174">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.441" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="108068" g_stop="107932" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="693" r_stop="829" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107931" i_stop="107856" i_length="76">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="107855" g_stop="107847" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="830" r_stop="838" r_length="9" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E702593" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>829</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E702593" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109104" e_stop="108865"/>
          <exon e_start="108766" e_stop="108561"/>
          <exon e_start="108479" e_stop="108243"/>
          <exon e_start="108068" e_stop="107932"/>
          <exon e_start="107855" e_stop="107847"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGTGTATGTTTTCACATACCTCTCCTTGATATGCTCCTATCTTTTCTCTTCTCAATACAATCATGCAACTCCATGCCATTTTTAACAATATCTGATAACAGGTTGCCTTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCGGTTGGTTCTCAGAGGCTTAGTTTAATGTGTTCCCTAGTTCTTATTTTGGTTGTTTGACACTTTTTATCATCTTATATACAGGAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCATACCAATCTAAAACTTATAAGGTGGAGATTAGCTTTGCTGCCAAGATTCCAATGCAGGCGATTGCAAATGCTTTGCGAGGTCAAGAGTCTGAGAACTCTCAAGAAGCCTTGCGAGTTTTGGATATAATTTTAAGGCAGCATGCTGCAAAACAGTAAGTTATGTGTCTATTACTACAGAAGTATTTTTGTGCGCCTCTTGATTGTTACATAATGACTTTTCTTATATTGGGGGTTGTTTACTTGTTCGTCAATAGTTATGTGTCTATGACTACAGAAGTATTTTTGTGCCTCTCTTGATTGTTACATAATGACTATTCTTATATTAGGGGTTGTTTACTTGTTCGTCAATCCTTTTTCCATAATGATCCTAAGAACTTTGCTGATGTTGGCGGTGGTGTTCTGGGCTGCCGAGGGTTCCATTCAAGTTTTCGTACCACCCAGTCGGGATTGTCATTGAACATTGGTAAATATCTATCTTTCATGTTTCATACTTATCTCAAATGAAATGAGGTTCATATTTTGTGTTTCCTTGATCACAGACGTGTCTA</genome_strand>
        <mrna_strand>AAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGT..................................................................................................GTTGCCTTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCG.................................................................................GAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCATACCAATCTAAAACTTATAAGGTGGAGATTAGCTTTGCTGCCAAGATTCCAATGCAGGCGATTGCAAATGCTTTGCGAGGTCAAGAGTCTGAGAACTCTCAAGAAGCCTTGCGAGTTTTGGATATAATTTTAAGGCAGCATGCTGCAAAACA..............................................................................................................................................................................GGGTTGTTTACTTGTTCGTCAATCCTTTTTCCATAATGATCCTAAGAACTTTGCTGATGTTGGCGGTGGTGTTCTGGGCTGCCGAGGGTTCCATTCAAGTTTTCGTACCACCCAGTCGGGATTGTCATTGAACATTG............................................................................ACGTGTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E738103" ref_strand="+" ref_description="SGN-E738103 [LC12BE11]">
      <seq>cttttattttctcttttgtcgtacattagggtttcacctcttcactctgtttcttcatccgccatttttgagctttagattgtggtaatggctgaagaagagaatggtggatccacagaggctctgcctcctcctccccctgttccacttaatttctctcctgcacaagctgaaccagagccagtgaagaagaaggttttacgtgttcccatggcaaggcgtggccttggaagcaagggacaaaagattccgatccttaccaatcactttaaagtgaacgtgtctaatgttgatggacacttctttcattacagtgttgccttattttatgaggatggtcgacctgtcgagggaaaaggcattggcagaaaagttctggatagagtgcatgaaacatatgatacagaattggctgggaaggattttgcatatgatggggagaagagtttgttcaccatcggttcactacctagaaataaactagagttcacagttgtactagatgacataacatctaatcggaacaacggtaccaatggcaactctagccctggcagacatggaagccctcctaatgaaactgataggaaaagattaaggcggccataccaatctaaaacttataaggtggagattagctttgctgccaagattccaatgcaggcgattgcaaatgctttgcgaggtcaagagtctgagaactctcaagaagccttgcgagttttggatataattttaaggcagcatgctgcaaaacagggttgtttacttgttcgtcaatcctttttccataatgatcctaagaactttgctgatgttggcggtggtgttctgggctgccgagggttccattcaagttttcgtaccacccagtcgggattgtcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="109403" stop="107641"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109104" g_stop="108865" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="315" r_length="240" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108864" i_stop="108767" i_length="98">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108766" g_stop="108561" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="521" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108560" i_stop="108480" i_length="81">
            <donor d_prob="0.113" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108479" g_stop="108243" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="522" r_stop="758" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108242" i_stop="108069" i_length="174">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.441" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="108068" g_stop="107941" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="759" r_stop="886" r_length="128" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E738103" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>811</cumulative_length_of_scored_exons>
        <coverage percentage="0.915" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E738103" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109104" e_stop="108865"/>
          <exon e_start="108766" e_stop="108561"/>
          <exon e_start="108479" e_stop="108243"/>
          <exon e_start="108068" e_stop="107941"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGTGTATGTTTTCACATACCTCTCCTTGATATGCTCCTATCTTTTCTCTTCTCAATACAATCATGCAACTCCATGCCATTTTTAACAATATCTGATAACAGGTTGCCTTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCGGTTGGTTCTCAGAGGCTTAGTTTAATGTGTTCCCTAGTTCTTATTTTGGTTGTTTGACACTTTTTATCATCTTATATACAGGAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCATACCAATCTAAAACTTATAAGGTGGAGATTAGCTTTGCTGCCAAGATTCCAATGCAGGCGATTGCAAATGCTTTGCGAGGTCAAGAGTCTGAGAACTCTCAAGAAGCCTTGCGAGTTTTGGATATAATTTTAAGGCAGCATGCTGCAAAACAGTAAGTTATGTGTCTATTACTACAGAAGTATTTTTGTGCGCCTCTTGATTGTTACATAATGACTTTTCTTATATTGGGGGTTGTTTACTTGTTCGTCAATAGTTATGTGTCTATGACTACAGAAGTATTTTTGTGCCTCTCTTGATTGTTACATAATGACTATTCTTATATTAGGGGTTGTTTACTTGTTCGTCAATCCTTTTTCCATAATGATCCTAAGAACTTTGCTGATGTTGGCGGTGGTGTTCTGGGCTGCCGAGGGTTCCATTCAAGTTTTCGTACCACCCAGTCGGGATTGTCAT</genome_strand>
        <mrna_strand>TAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGT..................................................................................................GTTGCCTTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCG.................................................................................GAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCATACCAATCTAAAACTTATAAGGTGGAGATTAGCTTTGCTGCCAAGATTCCAATGCAGGCGATTGCAAATGCTTTGCGAGGTCAAGAGTCTGAGAACTCTCAAGAAGCCTTGCGAGTTTTGGATATAATTTTAAGGCAGCATGCTGCAAAACA..............................................................................................................................................................................GGGTTGTTTACTTGTTCGTCAATCCTTTTTCCATAATGATCCTAAGAACTTTGCTGATGTTGGCGGTGGTGTTCTGGGCTGCCGAGGGTTCCATTCAAGTTTTCGTACCACCCAGTCGGGATTGTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E409056" ref_strand="+" ref_description="SGN-E409056 [PPI-13-A11]">
      <seq>ctttctttctcttttgtcgtacattagggtttcacctcttgactctgtttcttcatccgccatttttgagctttagaagattgtggtaatggctgaagaagagaatggtggatccacagaggctctgccccctcctccccctgttccacttgatttctctccagcacaagctgaaccagagccggtgaagaaaaaggttttacgtgttcccatggcgagacgtggccttggaagcaagggacaaaagatcccgatccttaccaatcactttaaagtgaacgtgtctaatgttgatggacacttctttcattacagtgttgccctattttatgaggatggtcgacctgtcgagggaaaaggaattggcagaaaagttctggatagagtgcatgaaacatatgatacagaattggccgggaaggattttgcatatgatggggagaagagtttgttcaccattggctcactacctagaaataaattagagttcacggttgtactagatgacataacatctaatcggaacaacgggaccaatggcaactccagccctggcagacatggaagccctcctaatgaaactgataggaaaagattaaggcggccgtaccaatctaaaacttacaaggtggagattagcttcgctgccaagattccaatgcaggcgattgcaaatgctttacgaggtcaagagtctgagaactctcaagaagccttgcgagttttggatataattttaaggcagcatgctgcaaaacagggttgtttacttgttcggcaatcctttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="109406" stop="107738"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109104" g_stop="108865" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="316" r_length="240" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108864" i_stop="108767" i_length="98">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108766" g_stop="108561" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="522" r_length="206" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108560" i_stop="108480" i_length="81">
            <donor d_prob="0.113" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108479" g_stop="108243" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="759" r_length="237" r_score="0.975"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108242" i_stop="108069" i_length="174">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.441" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="108068" g_stop="108038" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="760" r_stop="790" r_length="31" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E409056" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="0.904" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E409056" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109104" e_stop="108865"/>
          <exon e_start="108766" e_stop="108561"/>
          <exon e_start="108479" e_stop="108243"/>
          <exon e_start="108068" e_stop="108038"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGTGTATGTTTTCACATACCTCTCCTTGATATGCTCCTATCTTTTCTCTTCTCAATACAATCATGCAACTCCATGCCATTTTTAACAATATCTGATAACAGGTTGCCTTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCGGTTGGTTCTCAGAGGCTTAGTTTAATGTGTTCCCTAGTTCTTATTTTGGTTGTTTGACACTTTTTATCATCTTATATACAGGAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCATACCAATCTAAAACTTATAAGGTGGAGATTAGCTTTGCTGCCAAGATTCCAATGCAGGCGATTGCAAATGCTTTGCGAGGTCAAGAGTCTGAGAACTCTCAAGAAGCCTTGCGAGTTTTGGATATAATTTTAAGGCAGCATGCTGCAAAACAGTAAGTTATGTGTCTATTACTACAGAAGTATTTTTGTGCGCCTCTTGATTGTTACATAATGACTTTTCTTATATTGGGGGTTGTTTACTTGTTCGTCAATAGTTATGTGTCTATGACTACAGAAGTATTTTTGTGCCTCTCTTGATTGTTACATAATGACTATTCTTATATTAGGGGTTGTTTACTTGTTCGTCAATCCTTTTTC</genome_strand>
        <mrna_strand>AAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCCCCTCCTCCCCCTGTTCCACTTGATTTCTCTCCAGCACAAGCTGAACCAGAGCCGGTGAAGAAAAAGGTTTTACGTGTTCCCATGGCGAGACGTGGCCTTGGAAGCAAGGGACAAAAGATCCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGT..................................................................................................GTTGCCCTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGAATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCCGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATTGGCTCACTACCTAGAAATAAATTAGAGTTCACGGTTGTACTAGATGACATAACATCTAATCG.................................................................................GAACAACGGGACCAATGGCAACTCCAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCGTACCAATCTAAAACTTACAAGGTGGAGATTAGCTTCGCTGCCAAGATTCCAATGCAGGCGATTGCAAATGCTTTACGAGGTCAAGAGTCTGAGAACTCTCAAGAAGCCTTGCGAGTTTTGGATATAATTTTAAGGCAGCATGCTGCAAAACA..............................................................................................................................................................................GGGTTGTTTACTTGTTCGGCAATCCTTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E736447" ref_strand="+" ref_description="SGN-E736447 [LC05DC01]">
      <seq>agctttagaagattgtggtaatggctgaagaatagaatggtggatccacagaggctctgcctcctcctccccctgttccacttaatttctctcctgcacaagctgaaccagagccagtgaagaagaaggtttacgtgttcccatggcaaggcgtggccttggaagcaagggacaaaagattccgatccttaccaatcactttaaagtgaacgtgtctaatgttgatggacacttctttcattacagtgttgccttttatgaggatggtcgacctgtcgagggaaaaggcattggcagaaaagttctggatagagtgcatgaaacatatgatacagaattggctgggaaggattttgcatatgatggggagaagagtttgttcaccatcggttcactacctagaaataaactagagttcacagttgtactagatgacataacatctaatcggaacaacggtaccaatggcaactctagccctggcagacatggaagccctcctaatgaaactgataggaaaagattaaggcggccataccaatctaaaacttataaggtggagattagctttgctgccaagattccaatgcaggcgattgcaaatgctttgcgaggtcaagagtctgagaactctcaagaagccttgcgagttttggatataattttaaggcagcatgctgcaaaacagggttgtttacttgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="109406" stop="107753"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109104" g_stop="108865" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="247" r_length="239" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108864" i_stop="108767" i_length="98">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108766" g_stop="108561" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="450" r_length="203" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108560" i_stop="108480" i_length="81">
            <donor d_prob="0.113" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108479" g_stop="108243" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="687" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108242" i_stop="108069" i_length="174">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.441" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="108068" g_stop="108053" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="688" r_stop="703" r_length="16" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E736447" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>699</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E736447" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109104" e_stop="108865"/>
          <exon e_start="108766" e_stop="108561"/>
          <exon e_start="108479" e_stop="108243"/>
          <exon e_start="108068" e_stop="108053"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGTGTATGTTTTCACATACCTCTCCTTGATATGCTCCTATCTTTTCTCTTCTCAATACAATCATGCAACTCCATGCCATTTTTAACAATATCTGATAACAGGTTGCCTTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCGGTTGGTTCTCAGAGGCTTAGTTTAATGTGTTCCCTAGTTCTTATTTTGGTTGTTTGACACTTTTTATCATCTTATATACAGGAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCATACCAATCTAAAACTTATAAGGTGGAGATTAGCTTTGCTGCCAAGATTCCAATGCAGGCGATTGCAAATGCTTTGCGAGGTCAAGAGTCTGAGAACTCTCAAGAAGCCTTGCGAGTTTTGGATATAATTTTAAGGCAGCATGCTGCAAAACAGTAAGTTATGTGTCTATTACTACAGAAGTATTTTTGTGCGCCTCTTGATTGTTACATAATGACTTTTCTTATATTGGGGGTTGTTTACTTGTTCGTCAATAGTTATGTGTCTATGACTACAGAAGTATTTTTGTGCCTCTCTTGATTGTTACATAATGACTATTCTTATATTAGGGGTTGTTTACTTGTT</genome_strand>
        <mrna_strand>AAGATTGTGGTAATGGCTGAAGAATAGAATGGTGGATCCACAGAGGCTCTGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGG-TTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGT..................................................................................................GTTGCC---TTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCG.................................................................................GAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCATACCAATCTAAAACTTATAAGGTGGAGATTAGCTTTGCTGCCAAGATTCCAATGCAGGCGATTGCAAATGCTTTGCGAGGTCAAGAGTCTGAGAACTCTCAAGAAGCCTTGCGAGTTTTGGATATAATTTTAAGGCAGCATGCTGCAAAACA..............................................................................................................................................................................GGGTTGTTTACTTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E740538" ref_strand="+" ref_description="SGN-E740538 [LC21DE05]">
      <seq>cttttgtcgtacattagggtttcacctcttcactctgtttcttcatccgccatttttgagctttagaagattgtggtaatggctgaagaagagaatggtggatccacagaggctctgcctcctcctccccctgttccacttaatttctctcctgcacaagctgaaccagagccagtgaagaagaaggttttacgtgttcccatggcaaggcgtggccttggaagcaagggacaaaagattccgatccttaccaatcactttaaagtgaacgtgtctaatgttgatggacacttctttcattacagtgttgccttattttatgaggatggtcgacctgtcgagggaaaaggcattggcagaaaagttctggatagagtgcatgaaacatatgatacagaattggctgggaaggattttgcatatgatggggagaagagtttgttcaccatcggttcactacctagaaataaactagagttcacagttgtactagatgacataacatctaatcggaacaacggtaccaatggcaactctagccctggcagacatggaagccctcctaatgaaactgataggaaaagattaaggcggccataccaatctaaaacttataaggtggagattagctttgctgccaagattccaatgcaggcgatttgcaaatgctttgcgaggtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="109406" stop="108013"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109104" g_stop="108865" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="306" r_length="240" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108864" i_stop="108767" i_length="98">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108766" g_stop="108561" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="512" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108560" i_stop="108480" i_length="81">
            <donor d_prob="0.113" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108479" g_stop="108313" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="513" r_stop="680" r_length="168" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E740538" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="0.901" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E740538" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109104" e_stop="108865"/>
          <exon e_start="108766" e_stop="108561"/>
          <exon e_start="108479" e_stop="108313"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGTGTATGTTTTCACATACCTCTCCTTGATATGCTCCTATCTTTTCTCTTCTCAATACAATCATGCAACTCCATGCCATTTTTAACAATATCTGATAACAGGTTGCCTTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCGGTTGGTTCTCAGAGGCTTAGTTTAATGTGTTCCCTAGTTCTTATTTTGGTTGTTTGACACTTTTTATCATCTTATATACAGGAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCATACCAATCTAAAACTTATAAGGTGGAGATTAGCTTTGCTGCCAAGATTCCAATGCAGGCGA-TTGCAAATGCTTTGCGAGGTC</genome_strand>
        <mrna_strand>AAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGT..................................................................................................GTTGCCTTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCG.................................................................................GAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCATACCAATCTAAAACTTATAAGGTGGAGATTAGCTTTGCTGCCAAGATTCCAATGCAGGCGATTTGCAAATGCTTTGCGAGGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E735498" ref_strand="+" ref_description="SGN-E735498 [LC01DD12]">
      <seq>ctatttaaaataattaattttaaaaaaaaaaaaaaaataaaaaaaataaactcttggggggggggccccatcccccttctctttatttttagaatattaaaaaaatggctgaagaagagaatcgtggatccacagaggctctgcctcctcctccccctgttccacttaatttctctcctgcacaagctgaaccagagccagtgaagaagaaggttttacgtgttcccatggcaaggcgtggccttggaagcaagggacaaaagattccgatccttaccaatcactttaaagtgaacgtgtctaatgttgatggacacttctttcattacagtgttgccttattttatgaggatggtcgacctgtcgagggaaaaggcattggcagaaaagttctggatagagtgcatgaaacatatgatacagaattggctgggaaggattttgcatatgatggggagaagagtttgttcaccatcggttcactacctagaaataaactagagttcacagttgtactagatgacataacatctaatcggaacaacggtaccactggcaactctagccctggcagacatggaagccctcctaatgaaactgataggaaaaaattaaggcggccataccaatctaaaacttttaacgtggagatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="136033" stop="108065"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109346" g_stop="109255" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="109254" i_stop="109105" i_length="150">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="109104" g_stop="108865" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="332" r_length="240" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108864" i_stop="108767" i_length="98">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108766" g_stop="108561" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="538" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108560" i_stop="108480" i_length="81">
            <donor d_prob="0.113" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="108479" g_stop="108365" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="653" r_length="115" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E735498" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E735498" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109346" e_stop="109255"/>
          <exon e_start="109104" e_stop="108865"/>
          <exon e_start="108766" e_stop="108561"/>
          <exon e_start="108479" e_stop="108365"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCAAAGACTGGAAGTGATTAGTAGTTGTATGCATTTAGTTTCTTTTATTGACTGCTTCCTAAGTGTATCTTTTTGCCTAGAAAAGATCTCTGCATACTTCTTTTCCAGTTTTTCTGAGGATCTTTTGGAACTTGTGATCTTCTTTACAGAAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGTGTATGTTTTCACATACCTCTCCTTGATATGCTCCTATCTTTTCTCTTCTCAATACAATCATGCAACTCCATGCCATTTTTAACAATATCTGATAACAGGTTGCCTTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCGGTTGGTTCTCAGAGGCTTAGTTTAATGTGTTCCCTAGTTCTTATTTTGGTTGTTTGACACTTTTTATCATCTTATATACAGGAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCATACCAATCTAAAACTTATAAGGTGGAGATT</genome_strand>
        <mrna_strand>CTATTTAAAATAATTAATTTTAAAAAAAAAAAAAAAATAAAAAAAATAAACTCTTGGGGGGGGGGCCCCATCCCCCTTCTCTTTATTTTTAG......................................................................................................................................................AATATTAAAAAAATGGCTGAAGAAGAGAATCGTGGATCCACAGAGGCTCTGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGT..................................................................................................GTTGCCTTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCG.................................................................................GAACAACGGTACCACTGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAAAAATTAAGGCGGCCATACCAATCTAAAACTTTTAACGTGGAGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E568346" ref_strand="+" ref_description="SGN-E568346 [12614]">
      <seq>tttagaagattgtggtaatggctgaagaagagaatggtggatccacagaggctcgtggcccctcctccccctgttccacttgatttctctccagcacaagctgaaccagagccggtgaagaaaaaggttttacgtgttcccatggcgagacgtggcttggaagcaagggacaaaagatcccgatccttaccaatcactttaaagtgaacgtgtctaatgttgatggacacttctttcattacagtgttgccctattttatgaggatggtcgacctgtcgacgggaaaaggaattgagagaaaagttctggatagcagtgcatgaaacatatgatacagaattgggcgggaaggattttgcatatgatggggagaagagtttgttcaccattgggtcactacctagaaataaattagagttcacggttgtactagatgacataaacatctaatcggaacaacgggaccaattggaactccaggcctggccagagatggaaaggcctcctaatgaaactgataggaaaaagattaagggggcgtaccaatctaaaattacaaggtggagata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="109406" stop="108097"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109104" g_stop="108865" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="6" r_stop="245" r_length="240" r_score="0.950"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108864" i_stop="108767" i_length="98">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108766" g_stop="108561" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="454" r_length="209" r_score="0.922"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108560" i_stop="108480" i_length="81">
            <donor d_prob="0.113" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.77"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108479" g_stop="108365" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="570" r_length="116" r_score="0.835"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E568346" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>561</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E568346" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109104" e_stop="108865"/>
          <exon e_start="108766" e_stop="108561"/>
          <exon e_start="108479" e_stop="108365"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTC-TGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGTGTATGTTTTCACATACCTCTCCTTGATATGCTCCTATCTTTTCTCTTCTCAATACAATCATGCAACTCCATGCCATTTTTAACAATATCTGATAACAGGTTGCCTTATTTTATGAGGATGGTCGACCTGTCGA-GGGAAAAGGCATTGGCAGAAAAGTTCTGGATAG-AGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACAT-AACATCTAATCGGTTGGTTCTCAGAGGCTTAGTTTAATGTGTTCCCTAGTTCTTATTTTGGTTGTTTGACACTTTTTATCATCTTATATACAGGAACAACGGTACCAATGGCAACTCTAGCCCTGG-CAGACATGG-AAGCCCTCCTAATGAAACTGATAGG-AAAAGATTAAGGCGGCCATACCAATCTAAAACTTATAAGGTGGAGATT</genome_strand>
        <mrna_strand>AAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCGTGGCCCCTCCTCCCCCTGTTCCACTTGATTTCTCTCCAGCACAAGCTGAACCAGAGCCGGTGAAGAAAAAGGTTTTACGTGTTCCCATGGCGAGACGTGG-CTTGGAAGCAAGGGACAAAAGATCCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGT..................................................................................................GTTGCCCTATTTTATGAGGATGGTCGACCTGTCGACGGGAAAAGGAATTGAGAGAAAAGTTCTGGATAGCAGTGCATGAAACATATGATACAGAATTGGGCGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATTGGGTCACTACCTAGAAATAAATTAGAGTTCACGGTTGTACTAGATGACATAAACATCTAATCG.................................................................................GAACAACGGGACCAATTGGAACTCCAGGCCTGGCCAGAGATGGAAAGGCCTCCTAATGAAACTGATAGGAAAAAGATTAAGG-GGGCGTACCAATCTAAAA-TTACAAGGTGGAGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E323951" ref_strand="+" ref_description="SGN-E323951 [cTOC-3-I20]">
      <seq>ccatttttgagctttagaagattgtggtaatggctgaagaagagaatggtggatccacagaggctctgcctcctcctccccctgttccacttaatttctctcctgcacaagctgaaccagagccagtgaagaagaaggttttacgtgttcccatggcaaggcgtggccttggaagcaagggacaaaagattccgatccttaccaatcactttaaagtgaacgtgtctaatgttgatggacacttctttcattacagtgttgccttattttatgaggatggtcgacctgtcgagggaaaaggcattggcagaaaagttctggatagagtgcatgaaacatatgatacagaattggctgggaaggattttgcatatgatggggagaagagtttgttcaccatcggttcactacctagaaataaactagagttcacagttgtactagatgacataacatctaatcggaacaacggtaccaatggcaactctagccctggcagacatggaagccctcctaatgaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="109406" stop="108119"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109104" g_stop="108865" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="257" r_length="240" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108864" i_stop="108767" i_length="98">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108766" g_stop="108561" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="463" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108560" i_stop="108480" i_length="81">
            <donor d_prob="0.113" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108479" g_stop="108419" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="524" r_length="61" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E323951" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>507</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E323951" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109104" e_stop="108865"/>
          <exon e_start="108766" e_stop="108561"/>
          <exon e_start="108479" e_stop="108419"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGTGTATGTTTTCACATACCTCTCCTTGATATGCTCCTATCTTTTCTCTTCTCAATACAATCATGCAACTCCATGCCATTTTTAACAATATCTGATAACAGGTTGCCTTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCGGTTGGTTCTCAGAGGCTTAGTTTAATGTGTTCCCTAGTTCTTATTTTGGTTGTTTGACACTTTTTATCATCTTATATACAGGAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACT</genome_strand>
        <mrna_strand>AAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGT..................................................................................................GTTGCCTTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCG.................................................................................GAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E468456" ref_strand="+" ref_description="SGN-E468456 [cSTB-4-F6]">
      <seq>ctctccagcacatgctgaaccagagccggtgaataaaaaggttttacgtgttcccatggcgagacgtggccttggaagcaagggacaaaagatcccgatccttaccaatcactttaaagtgaacgtgtctaatgttgatggacacttctttcattacagtgttgccctattttatgaggatggtcgacctgtcgagggaaaaggaattggcataaaagttctggatagagtgcatgaaacatatgatacagaattggccgggaaggattttgcatatgatggggagaagagtttgttcaccattggctcactacctagaaataaattagagttcacggttgtactagatgacatagcatctaatcggaacaacgggaccaatggcaactgcagccctggcagacatggaagccctcctaatgaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="109324" stop="108120"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109024" g_stop="108865" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="0.950"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108864" i_stop="108767" i_length="98">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108766" g_stop="108561" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="366" r_length="206" r_score="0.956"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108560" i_stop="108480" i_length="81">
            <donor d_prob="0.113" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108479" g_stop="108420" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="426" r_length="60" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E468456" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>426</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E468456" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109024" e_stop="108865"/>
          <exon e_start="108766" e_stop="108561"/>
          <exon e_start="108479" e_stop="108420"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGTGTATGTTTTCACATACCTCTCCTTGATATGCTCCTATCTTTTCTCTTCTCAATACAATCATGCAACTCCATGCCATTTTTAACAATATCTGATAACAGGTTGCCTTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCGGTTGGTTCTCAGAGGCTTAGTTTAATGTGTTCCCTAGTTCTTATTTTGGTTGTTTGACACTTTTTATCATCTTATATACAGGAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAAC</genome_strand>
        <mrna_strand>CTCTCCAGCACATGCTGAACCAGAGCCGGTGAATAAAAAGGTTTTACGTGTTCCCATGGCGAGACGTGGCCTTGGAAGCAAGGGACAAAAGATCCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGT..................................................................................................GTTGCCCTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGAATTGGCATAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCCGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATTGGCTCACTACCTAGAAATAAATTAGAGTTCACGGTTGTACTAGATGACATAGCATCTAATCG.................................................................................GAACAACGGGACCAATGGCAACTGCAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E279979" ref_strand="-" ref_description="SGN-E279979 [cLEL-7-A23](-)">
      <seq>gcacgagtttgttttaaccaaaaatgtctgtctctcttctgagaaacactgcgtgacttgcctcaatctcacttggaattcaccccatttcctcagccaaaatgcgaagaacacgaagttccctcaaccaagaaaccccttctcagaaaaacccaggttgtgatggcacaggtggaagctccgttcctgaactccgtgttttcatccgaagaaagagagttaaaaagactgtggaagtcatagccaaagaggtcaaggaagaatcttctggcaaaaaagttatgcttgttagactgcctgatatagaggatttttcctattcgaaggacattacacatccccagtcaacaccttccaaaactgtgcgtttgacaggagaaaaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="110686" stop="109227"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110388" g_stop="110233" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="156" r_length="156" r_score="0.936"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110232" i_stop="110109" i_length="124">
            <donor d_prob="0.854" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110108" g_stop="109981" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="284" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="109980" i_stop="109591" i_length="390">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="109590" g_stop="109527" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="348" r_length="64" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-E279979" ref_strand="-">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>348</cumulative_length_of_scored_exons>
        <coverage percentage="0.902" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E279979" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="110388" e_stop="110233"/>
          <exon e_start="110108" e_stop="109981"/>
          <exon e_start="109590" e_stop="109527"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATGGTTTTGTTTTAACCAAAAATGTCTGTCTCTCTTCTGAGAAACACTGCGTTTCTTCCCTCAATCTCACTTGGAATTCAAACCATTTCCTCAGCCAAAATGCGAAGAACACGAAGTTCCCTCAACCAAGAAACCCCTTCTCAGAAAAACCCAGGTCAGCCAAACAATAAAGAATCCATTTTTGAGTTTAAAGGAGGCAACTTTTTTGAGGGGATGGGGGTGAGATTTCAGCTATTGTTGGAAAAATTTCTGTAATATTGAAGTTTTTCTGTGTTCAGGTTGTGATGGCACAGGTGGAAGCTCCGTTCCTGAACTCCGTGTTTTCATCCGAAGAAAGAGAGTTAAAAAGACTGTGGAAGTCATAGCCAAAGAGGTCAAGGAAGAATCTTCTGGCAAAAAAGTTATGGTATTCCTAAATCTATATTACTTTTGGATTGAAATGGTTGTAACTTATATTTAAAAGAATTAACCTAAATAAACGTCCAGAATCCATGCATAAAATGTGTATAGTTGTGTATAAGTCTGTAAGATATGTATACCGTCTAGAAAAAATGAAATGCGCGGCTCTTTGTGTGAAGATACTTTGTATTTAAGTGTATTTACAGAGGGAATAGACTTGCAGAACTTTTAGCATCCAAATTCAGAGTCTGGTAGTGCATCTAACTGATTAAAATTTTAACCATCTCGAGATACTTTTTGCTTTGATCGTTTGAGTTGTTTAAGGTTAATTTGATCATTTGGCTTTCAGTGACGCAAAAGGAAAGAGAACTCTCTGATCTTTTTTTGGCTTTTGCAGCTTGTTAGACTGCCTGATATAGAGGATTTTTCCTATTCGAAGGACATTACACATCCCCAGTCAA</genome_strand>
        <mrna_strand>GCACGAGTTTGTTTTAACCAAAAATGTCTGTCTCTCTTCTGAGAAACACTGCGTGACTTGCCTCAATCTCACTTGGAATTCACCCCATTTCCTCAGCCAAAATGCGAAGAACACGAAGTTCCCTCAACCAAGAAACCCCTTCTCAGAAAAACCCAG............................................................................................................................GTTGTGATGGCACAGGTGGAAGCTCCGTTCCTGAACTCCGTGTTTTCATCCGAAGAAAGAGAGTTAAAAAGACTGTGGAAGTCATAGCCAAAGAGGTCAAGGAAGAATCTTCTGGCAAAAAAGTTATG......................................................................................................................................................................................................................................................................................................................................................................................................CTTGTTAGACTGCCTGATATAGAGGATTTTTCCTATTCGAAGGACATTACACATCCCCAGTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E431095" ref_strand="+" ref_description="SGN-E431095 [STM-54-L24]">
      <seq>cgaggctggaggatatattggatgcatttgctgacagagtctccatacctccgctctttatgacggacaagatgcaaattgctcttgctgggggtttgggacatggtgtggctcatgctgtgtttttctgccttggccttttgacacctgcatttggaccagcgacatactatgtagagaaatgctcaaagatacccttttttcttgtttctgcaattatagcccttgcctttgctaccattcacactttctccatggttattgcgttcagtggatatgaagaaggaaacttttggaccaccgttttgctcctggtgttcacttaattgctggcatgttgacactgacgaatcttgcatttggaggctgcatgattggcattccacttctctattgtgtagcaatcgtgaccttggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="113330" stop="117237"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113630" g_stop="113715" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="2" r_stop="87" r_length="86" r_score="0.907"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113716" i_stop="115314" i_length="1599">
            <donor d_prob="0.968" d_score="0.90"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="115315" g_stop="115440" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="213" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="115441" i_stop="116210" i_length="770">
            <donor d_prob="0.838" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="116211" g_stop="116338" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="340" r_length="127" r_score="0.914"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="116339" i_stop="116860" i_length="522">
            <donor d_prob="0.930" d_score="0.86"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="116861" g_stop="116937" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="417" r_length="77" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E431095" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E431095" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113630" e_stop="113715"/>
          <exon e_start="115315" e_stop="115440"/>
          <exon e_start="116211" e_stop="116338"/>
          <exon e_start="116861" e_stop="116937"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCTGGAGGATTTATTGGATGCGTTTGCTGACAGAGTCTCTAAACCTCGCCTCTTTATGACAGACAAGATGCAAATTGCTCTTGGTAGAATACTGAACATTTTCGCTACATGTCTTGTAAATTCTAGTATTTAGTTTTGATACTTTTTCTATCTCCCCTAGAATTTTTTTTTTTTTTATAATTTTCTTTTTTTCACTAAGGTACCTAAATGGGGAGGCTAGGGAAAATGAGTGTGGAAGACTTGTCACAATGATCTGAAAACCCCTAGGGCCTAACCTTAACCCAACCCAATAAGCGGGAAAATAAAAAGGTGGAAGCAGCTCGCCTACCCATTGAGGGTGTACCTTTTTGTTGCAAAACATGTTACATTTTAGTTTCAGAGCATGCAACAGTGCAGCAAGCTCGTACTATATATATATATATATATTGGTCCAACAAGACAGCAATTCTTAGATCGAAAACAATAAAAGAGAAGAGATGAGATTGTAGAGAGAACATAGATACTTCCAGGGGTAGGTACAACCATTGGAGCTGCAGCTGCTATTGCGTATTAGTCGTTGGGTGCTTCTAAGATTTCACTGTTGGCGACATATTTTAGCATTAAAAATGAAATTGTTGATATCATATAACTGAAGATCCCATAGCACCATGCAACTTCTAAACCTTCTTTTCAGCTCTGCACTTAACCAATTGATCTTCTCCAGTGGAAACAGAATTGAACAAGAAAAACCTCAGCATATTTAACGGAAGCTAAAAAGGAACTTGCTAATAACTGATGCATCACTTATGCAACTTTTAGGTCTAATTGATTGACAAGTTAAGAACAATTTCCTAATAACAAAATCATCTTGATGGTTTCTGATGTTGTACAGATAAAAGGATTCTAATAATATCATGAAAACACGTCCGACCATAGGAAACTTGAAGATGCTATTAGTTGCACTCTCTCTATTGGACTGATGCAATTGAAGTTCTGTTTAGATATAGGCAGGCAAAGTGGGACTTAGTAGCTGAGATTGATGTGCTGGTTTCATTTAACCGAGTGTTAAATGGACCGAGAGACTGTCAGTTGGAAAGGAGTTGAAAGTTGAAGGAGGACAGTAAGGGATTAGGTTATTGATTGAGGAAAGGCATGTTCAATGAGATTGGGATGGAAAACGCTAGCTTTTAGAGTTTAGATGACTGAGGTTTAAGTTTTAACTGCTCTTTCTTTTTTCTGAAGGTTTAGATGTTGCTAATCTGATACTTCTATAAGCTACTTCTACTAGATGGTATCAAGTATTGGAGTGTGAAAATAAAAAGATAAAGGAGTTATCTTAAAAACTATTCTGCAGTTTTCTCTATTTATACAACCCTCTTTGCCGTTTAAATTGGCAATAGATGTTCTATTAATTAGAATAAGCATTTTTAAGGGCCATTATTGTTCAATATGATTCTGAATCCGCTGAGATGTCGAAAATCATGCTGCACCCCGTGATGTTAATTGCTTGTGGCCGCTTTATCTGGGATACTATTACTGTTTGTACCCCTTTCCAGCTCCAAGTTGTTTCAACTTTCGAATATTCTTTTGATCTTTCCATTTATGGTGAAGGCAAACTACCTTACTGCTATTAGATATCTAGTGTAGTTTCTGATATTCTATTTGTTATCTGACACTAACATCTGATATGAGTTGACATGCAGCTGGGGGTTTGGGACATGGTGTGGCTCATGCTGTGTTTTTCTGCCTTGGCCTTTTGACACCTGCATTTGGACCAGCGACATACTATGTAGAGAAATGCTCAAAGATACCCTTTTTTCTTGTTTCTGGTAAGGGAATTCTGCTATTTCTGAGTTCCTCTTTTATTCTTTTGGAATTAGCTTCTGAGTACCTTGTATTATTGATCTTCAGCAAACTCTATATTTGAAAGATCTTCAGAACCAAAGTTTAAAGCAGTGAATGGAGTAACTTAGGACCATTATAAACTTCTTTGGATATCCTTACACAACTAATGAGGGACAATTGTTATCTTTAACCCTCCCGTCCCCCCGTCCCCCCCCCCCCCTTCCCAAACACACACACACACACACTCACACTCGTGTAACCCGGTTCTAGAGCATACACGTGGACTTTAACATTTTTTTTAATTCCATGTTCTTTTTTAAATAGATTAAATAGTGGGTTTATAGTAGAGAAAGACTAGTCTCAACAAGTTGAAGAGTGTCCCGGAGCATAGAGATAAAGAGAGAGTAGGCTCAACAGGCTAAAGAGTGGAAATGGAGTAGGGAGATAGTGAGAGAATAGGCTGAAGATTCAATCAAGAGAAGTGAGTGACTCAACACACTATATTGGGATAGAGAAGCCTAGAGGTGCTTGATGGCCTAAGTTGAGATATAAAACCCTACAGAGATAAAAACAAGTAGGGATGAAGTATGTGTGATGGCGAGCTTACCTAAAATTTTGGGTTCCCTTTTCTTGGGGCTGCAACTATGGTTTTAACTTAGAAAAATAGTGTAAAGTATAGTGCATGTTGCCATAGTATTGCTTACTACCTCCATATTTATGCAGTCTTAACACTATTTGGCATTTTAAATTGCAGCTATTATAGCCCTTGCCTTTGCTACCATCCACACTTTCTCCATGGTTATTGCATTCAGTGGATATGAAGAAGGAAACAAAGTGGACCAGTGTTTCGCTCCTGTTGTTCACTTAATTGCTGGCATGTTGGTAAGTATCCACATAATTGTGTATGCATACTTGAAGAGTGCAAACTAAACCTGTCGAGCAAACCAACTACTAAACTGAATGATACTACAGATCTTGTAACCGAAACTTTCCTAAATAGATCTGCTAGTTTTTTGGAGGGCTCTAGCATGAAATCAATATAGAAGCAGATAGTTTTAGCATTTGGTGTGGCTTCTGAATTATTTTGGATTAAAATGTACAAAGTCAATCATAACAGGTTACTTACATTCTTGGTTACCGAGAGTTATAGCTTCTACGTTTTTGATGCGCGAATATCTATAGTACAGGATCTCCAAAGAGGTCCATTTCTTCTTATTTCCTTGAAATCAGTGACTTGACCCATACTATTCAATGTCACTTGCTGATTTCATCTAATGTAGCACAGTTGATCGAGTTTATCAATCGTGCTTCCCTCTGTAGATTTACTATTTCGATGAAAAACTCGAGCAATGTGAGTGCATTTTTTGATTAAATGACGATTGATGATCTCTGGTTTGTTTTCAGACACTGACGAATCTTGCATTTGGAGGCTGCATGATTGGCATTCCACTCCTCTATTGTGTAGCAATCGTGACCTTGGT</genome_strand>
        <mrna_strand>GAGGCTGGAGGATATATTGGATGCATTTGCTGACAGAGTCTCCATACCTCCGCTCTTTATGACGGACAAGATGCAAATTGCTCTTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGGGTTTGGGACATGGTGTGGCTCATGCTGTGTTTTTCTGCCTTGGCCTTTTGACACCTGCATTTGGACCAGCGACATACTATGTAGAGAAATGCTCAAAGATACCCTTTTTTCTTGTTTCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTATAGCCCTTGCCTTTGCTACCATTCACACTTTCTCCATGGTTATTGCGTTCAGTGGATATGAAGAAGGAAAC-TTTTGGACCACCGTTTTGCTCCTGGTGTTCACTTAATTGCTGGCATGTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTGACGAATCTTGCATTTGGAGGCTGCATGATTGGCATTCCACTTCTCTATTGTGTAGCAATCGTGACCTTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E692259" ref_strand="+" ref_description="SGN-E692259 [LH_Ea08E01]">
      <seq>cgttgaggatttattggatgcgtttgctgacagagtctctaaacctcgcctctttatgacagacaagatgcaaattgctcttgctgggggtttgggacatggtgtggctcatgctgtgtttttctgccttggccttttgacacctgcatttggaccagcgacatactatgtagagaaatgctcaaagatacccttttttcttgtttctgctattatagcccttgcctttgctaccatccacactttctccatggttattgcattcagtggatatgaagaaggaaacaaagtggaccagtgttttgctcctgttgttcacttaattgctggcatgttgacactgacgaatcttgcatttggaggctgcatgattggcattccactcctctattgtgtagcaatcgtgaccttggtacattgcggaaagatggcatggaggagattgatagaaagccgaaacagggagggggacttcagcaatagccagtaaaagcaaggataataacctttttgtatgactgagaagtgtaagattagtaattgccagatatgtctaatgcatggagcatttgtcaagggtgactcaaagaagagactagtaaagcctttgttttacgcctccaaaaatatttcatagtcaactttatattggccaaatacatattcgggccactcaaactttacatgaaatttcattataatacctaacatttgccttgtacctattgaacacctaatattacaagaaattatgtctattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="113333" stop="117583"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113633" g_stop="113715" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="83" r_length="83" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113716" i_stop="115314" i_length="1599">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="115315" g_stop="115440" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="209" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="115441" i_stop="116210" i_length="770">
            <donor d_prob="0.838" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="116211" g_stop="116338" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="337" r_length="128" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="116339" i_stop="116860" i_length="522">
            <donor d_prob="0.930" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="116861" g_stop="117283" g_length="423"/>
          <reference_exon_boundary r_type="cDNA" r_start="338" r_stop="761" r_length="424" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E692259" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>760</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E692259" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113633" e_stop="113715"/>
          <exon e_start="115315" e_stop="115440"/>
          <exon e_start="116211" e_stop="116338"/>
          <exon e_start="116861" e_stop="117283"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGGAGGATTTATTGGATGCGTTTGCTGACAGAGTCTCTAAACCTCGCCTCTTTATGACAGACAAGATGCAAATTGCTCTTGGTAGAATACTGAACATTTTCGCTACATGTCTTGTAAATTCTAGTATTTAGTTTTGATACTTTTTCTATCTCCCCTAGAATTTTTTTTTTTTTTATAATTTTCTTTTTTTCACTAAGGTACCTAAATGGGGAGGCTAGGGAAAATGAGTGTGGAAGACTTGTCACAATGATCTGAAAACCCCTAGGGCCTAACCTTAACCCAACCCAATAAGCGGGAAAATAAAAAGGTGGAAGCAGCTCGCCTACCCATTGAGGGTGTACCTTTTTGTTGCAAAACATGTTACATTTTAGTTTCAGAGCATGCAACAGTGCAGCAAGCTCGTACTATATATATATATATATATTGGTCCAACAAGACAGCAATTCTTAGATCGAAAACAATAAAAGAGAAGAGATGAGATTGTAGAGAGAACATAGATACTTCCAGGGGTAGGTACAACCATTGGAGCTGCAGCTGCTATTGCGTATTAGTCGTTGGGTGCTTCTAAGATTTCACTGTTGGCGACATATTTTAGCATTAAAAATGAAATTGTTGATATCATATAACTGAAGATCCCATAGCACCATGCAACTTCTAAACCTTCTTTTCAGCTCTGCACTTAACCAATTGATCTTCTCCAGTGGAAACAGAATTGAACAAGAAAAACCTCAGCATATTTAACGGAAGCTAAAAAGGAACTTGCTAATAACTGATGCATCACTTATGCAACTTTTAGGTCTAATTGATTGACAAGTTAAGAACAATTTCCTAATAACAAAATCATCTTGATGGTTTCTGATGTTGTACAGATAAAAGGATTCTAATAATATCATGAAAACACGTCCGACCATAGGAAACTTGAAGATGCTATTAGTTGCACTCTCTCTATTGGACTGATGCAATTGAAGTTCTGTTTAGATATAGGCAGGCAAAGTGGGACTTAGTAGCTGAGATTGATGTGCTGGTTTCATTTAACCGAGTGTTAAATGGACCGAGAGACTGTCAGTTGGAAAGGAGTTGAAAGTTGAAGGAGGACAGTAAGGGATTAGGTTATTGATTGAGGAAAGGCATGTTCAATGAGATTGGGATGGAAAACGCTAGCTTTTAGAGTTTAGATGACTGAGGTTTAAGTTTTAACTGCTCTTTCTTTTTTCTGAAGGTTTAGATGTTGCTAATCTGATACTTCTATAAGCTACTTCTACTAGATGGTATCAAGTATTGGAGTGTGAAAATAAAAAGATAAAGGAGTTATCTTAAAAACTATTCTGCAGTTTTCTCTATTTATACAACCCTCTTTGCCGTTTAAATTGGCAATAGATGTTCTATTAATTAGAATAAGCATTTTTAAGGGCCATTATTGTTCAATATGATTCTGAATCCGCTGAGATGTCGAAAATCATGCTGCACCCCGTGATGTTAATTGCTTGTGGCCGCTTTATCTGGGATACTATTACTGTTTGTACCCCTTTCCAGCTCCAAGTTGTTTCAACTTTCGAATATTCTTTTGATCTTTCCATTTATGGTGAAGGCAAACTACCTTACTGCTATTAGATATCTAGTGTAGTTTCTGATATTCTATTTGTTATCTGACACTAACATCTGATATGAGTTGACATGCAGCTGGGGGTTTGGGACATGGTGTGGCTCATGCTGTGTTTTTCTGCCTTGGCCTTTTGACACCTGCATTTGGACCAGCGACATACTATGTAGAGAAATGCTCAAAGATACCCTTTTTTCTTGTTTCTGGTAAGGGAATTCTGCTATTTCTGAGTTCCTCTTTTATTCTTTTGGAATTAGCTTCTGAGTACCTTGTATTATTGATCTTCAGCAAACTCTATATTTGAAAGATCTTCAGAACCAAAGTTTAAAGCAGTGAATGGAGTAACTTAGGACCATTATAAACTTCTTTGGATATCCTTACACAACTAATGAGGGACAATTGTTATCTTTAACCCTCCCGTCCCCCCGTCCCCCCCCCCCCCTTCCCAAACACACACACACACACACTCACACTCGTGTAACCCGGTTCTAGAGCATACACGTGGACTTTAACATTTTTTTTAATTCCATGTTCTTTTTTAAATAGATTAAATAGTGGGTTTATAGTAGAGAAAGACTAGTCTCAACAAGTTGAAGAGTGTCCCGGAGCATAGAGATAAAGAGAGAGTAGGCTCAACAGGCTAAAGAGTGGAAATGGAGTAGGGAGATAGTGAGAGAATAGGCTGAAGATTCAATCAAGAGAAGTGAGTGACTCAACACACTATATTGGGATAGAGAAGCCTAGAGGTGCTTGATGGCCTAAGTTGAGATATAAAACCCTACAGAGATAAAAACAAGTAGGGATGAAGTATGTGTGATGGCGAGCTTACCTAAAATTTTGGGTTCCCTTTTCTTGGGGCTGCAACTATGGTTTTAACTTAGAAAAATAGTGTAAAGTATAGTGCATGTTGCCATAGTATTGCTTACTACCTCCATATTTATGCAGTCTTAACACTATTTGGCATTTTAAATTGCAGCTATTATAGCCCTTGCCTTTGCTACCATCCACACTTTCTCCATGGTTATTGCATTCAGTGGATATGAAGAAGGAAACAAAGTGGACCAGTGTTTCGCTCCTGTTGTTCACTTAATTGCTGGCATGTTGGTAAGTATCCACATAATTGTGTATGCATACTTGAAGAGTGCAAACTAAACCTGTCGAGCAAACCAACTACTAAACTGAATGATACTACAGATCTTGTAACCGAAACTTTCCTAAATAGATCTGCTAGTTTTTTGGAGGGCTCTAGCATGAAATCAATATAGAAGCAGATAGTTTTAGCATTTGGTGTGGCTTCTGAATTATTTTGGATTAAAATGTACAAAGTCAATCATAACAGGTTACTTACATTCTTGGTTACCGAGAGTTATAGCTTCTACGTTTTTGATGCGCGAATATCTATAGTACAGGATCTCCAAAGAGGTCCATTTCTTCTTATTTCCTTGAAATCAGTGACTTGACCCATACTATTCAATGTCACTTGCTGATTTCATCTAATGTAGCACAGTTGATCGAGTTTATCAATCGTGCTTCCCTCTGTAGATTTACTATTTCGATGAAAAACTCGAGCAATGTGAGTGCATTTTTTGATTAAATGACGATTGATGATCTCTGGTTTGTTTTCAGACACTGACGAATCTTGCATTTGGAGGCTGCATGATTGGCATTCCACTCCTCTATTGTGTAGCAATCGTGACCTTGGTACATTGCGGAAAGATGGCATGGAGGAGATTGATAGAAAGCCGAAACAGGGAGGGGAACTTCAGCAATAGCCA--ATAAGCAAGGATAATAACCTTTTTTGTATTACTGAGAAGTGTAAGATTAGTAATTGCCAGATATATCTAATGCTTGGAGCATTTGCCAAGGGTGACTCAAAGAAGAGACTAGTAAATCTTTTGTTTTAGGCCTCCAAAAATATTTCATAGTCAACTTTATATTGGCCAAATAAATATTCGGGCCACTCAAACTTTACATGAATTTTCGTTGTAACACCTAACATTTGCCTTGTACCTATTGAACACCTAATATTACAAGAATTTATGTCTATTC</genome_strand>
        <mrna_strand>CGTTGAGGATTTATTGGATGCGTTTGCTGACAGAGTCTCTAAACCTCGCCTCTTTATGACAGACAAGATGCAAATTGCTCTTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGGGTTTGGGACATGGTGTGGCTCATGCTGTGTTTTTCTGCCTTGGCCTTTTGACACCTGCATTTGGACCAGCGACATACTATGTAGAGAAATGCTCAAAGATACCCTTTTTTCTTGTTTCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTATAGCCCTTGCCTTTGCTACCATCCACACTTTCTCCATGGTTATTGCATTCAGTGGATATGAAGAAGGAAACAAAGTGGACCAGTGTTTTGCTCCTGTTGTTCACTTAATTGCTGGCATGTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTGACGAATCTTGCATTTGGAGGCTGCATGATTGGCATTCCACTCCTCTATTGTGTAGCAATCGTGACCTTGGTACATTGCGGAAAGATGGCATGGAGGAGATTGATAGAAAGCCGAAACAGGGAGGGGGACTTCAGCAATAGCCAGTAAAAGCAAGGATAATAACC-TTTTTGTATGACTGAGAAGTGTAAGATTAGTAATTGCCAGATATGTCTAATGCATGGAGCATTTGTCAAGGGTGACTCAAAGAAGAGACTAGTAAAGCCTTTGTTTTACGCCTCCAAAAATATTTCATAGTCAACTTTATATTGGCCAAATACATATTCGGGCCACTCAAACTTTACATGAAATTTCATTATAATACCTAACATTTGCCTTGTACCTATTGAACACCTAATATTACAAGAAATTATGTCTATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E463309" ref_strand="+" ref_description="SGN-E463309 [cPRO-14-A16]">
      <seq>ctggaggatatattggatgcatttgctgacagagtctctaaacctcgcctctttatgacggacaagatgcaaattgctcttgctgggggtttgggacatggtgtggctcatgctgtgtttttctgccttggccttttgacacctgcatttggaccagcgacatactatgtagagaaatgctcaaagatacccttttttcttgtttctgcaattatagcccttgcctttgctaccattcacactttctccatggttattgcgttcagtggatatgaagaaggaaacaaagtggaccagtgttttgctcctgttgttcacttaattgctggcatgttgacactgacgaatcttgcatttggaggctacatgattggcattccacttctctattgtgtagcaatcgtgaccttggtacattgcggaaagatggcatggaggagattgatagaaagccgaagcagggagggaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="113334" stop="117295"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113634" g_stop="113715" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="82" r_length="82" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113716" i_stop="115314" i_length="1599">
            <donor d_prob="0.968" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="115315" g_stop="115440" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="83" r_stop="208" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="115441" i_stop="116210" i_length="770">
            <donor d_prob="0.838" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="116211" g_stop="116338" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="336" r_length="128" r_score="0.969"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="116339" i_stop="116860" i_length="522">
            <donor d_prob="0.930" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="116861" g_stop="116995" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="471" r_length="135" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E463309" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E463309" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113634" e_stop="113715"/>
          <exon e_start="115315" e_stop="115440"/>
          <exon e_start="116211" e_stop="116338"/>
          <exon e_start="116861" e_stop="116995"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGAGGATTTATTGGATGCGTTTGCTGACAGAGTCTCTAAACCTCGCCTCTTTATGACAGACAAGATGCAAATTGCTCTTGGTAGAATACTGAACATTTTCGCTACATGTCTTGTAAATTCTAGTATTTAGTTTTGATACTTTTTCTATCTCCCCTAGAATTTTTTTTTTTTTTATAATTTTCTTTTTTTCACTAAGGTACCTAAATGGGGAGGCTAGGGAAAATGAGTGTGGAAGACTTGTCACAATGATCTGAAAACCCCTAGGGCCTAACCTTAACCCAACCCAATAAGCGGGAAAATAAAAAGGTGGAAGCAGCTCGCCTACCCATTGAGGGTGTACCTTTTTGTTGCAAAACATGTTACATTTTAGTTTCAGAGCATGCAACAGTGCAGCAAGCTCGTACTATATATATATATATATATTGGTCCAACAAGACAGCAATTCTTAGATCGAAAACAATAAAAGAGAAGAGATGAGATTGTAGAGAGAACATAGATACTTCCAGGGGTAGGTACAACCATTGGAGCTGCAGCTGCTATTGCGTATTAGTCGTTGGGTGCTTCTAAGATTTCACTGTTGGCGACATATTTTAGCATTAAAAATGAAATTGTTGATATCATATAACTGAAGATCCCATAGCACCATGCAACTTCTAAACCTTCTTTTCAGCTCTGCACTTAACCAATTGATCTTCTCCAGTGGAAACAGAATTGAACAAGAAAAACCTCAGCATATTTAACGGAAGCTAAAAAGGAACTTGCTAATAACTGATGCATCACTTATGCAACTTTTAGGTCTAATTGATTGACAAGTTAAGAACAATTTCCTAATAACAAAATCATCTTGATGGTTTCTGATGTTGTACAGATAAAAGGATTCTAATAATATCATGAAAACACGTCCGACCATAGGAAACTTGAAGATGCTATTAGTTGCACTCTCTCTATTGGACTGATGCAATTGAAGTTCTGTTTAGATATAGGCAGGCAAAGTGGGACTTAGTAGCTGAGATTGATGTGCTGGTTTCATTTAACCGAGTGTTAAATGGACCGAGAGACTGTCAGTTGGAAAGGAGTTGAAAGTTGAAGGAGGACAGTAAGGGATTAGGTTATTGATTGAGGAAAGGCATGTTCAATGAGATTGGGATGGAAAACGCTAGCTTTTAGAGTTTAGATGACTGAGGTTTAAGTTTTAACTGCTCTTTCTTTTTTCTGAAGGTTTAGATGTTGCTAATCTGATACTTCTATAAGCTACTTCTACTAGATGGTATCAAGTATTGGAGTGTGAAAATAAAAAGATAAAGGAGTTATCTTAAAAACTATTCTGCAGTTTTCTCTATTTATACAACCCTCTTTGCCGTTTAAATTGGCAATAGATGTTCTATTAATTAGAATAAGCATTTTTAAGGGCCATTATTGTTCAATATGATTCTGAATCCGCTGAGATGTCGAAAATCATGCTGCACCCCGTGATGTTAATTGCTTGTGGCCGCTTTATCTGGGATACTATTACTGTTTGTACCCCTTTCCAGCTCCAAGTTGTTTCAACTTTCGAATATTCTTTTGATCTTTCCATTTATGGTGAAGGCAAACTACCTTACTGCTATTAGATATCTAGTGTAGTTTCTGATATTCTATTTGTTATCTGACACTAACATCTGATATGAGTTGACATGCAGCTGGGGGTTTGGGACATGGTGTGGCTCATGCTGTGTTTTTCTGCCTTGGCCTTTTGACACCTGCATTTGGACCAGCGACATACTATGTAGAGAAATGCTCAAAGATACCCTTTTTTCTTGTTTCTGGTAAGGGAATTCTGCTATTTCTGAGTTCCTCTTTTATTCTTTTGGAATTAGCTTCTGAGTACCTTGTATTATTGATCTTCAGCAAACTCTATATTTGAAAGATCTTCAGAACCAAAGTTTAAAGCAGTGAATGGAGTAACTTAGGACCATTATAAACTTCTTTGGATATCCTTACACAACTAATGAGGGACAATTGTTATCTTTAACCCTCCCGTCCCCCCGTCCCCCCCCCCCCCTTCCCAAACACACACACACACACACTCACACTCGTGTAACCCGGTTCTAGAGCATACACGTGGACTTTAACATTTTTTTTAATTCCATGTTCTTTTTTAAATAGATTAAATAGTGGGTTTATAGTAGAGAAAGACTAGTCTCAACAAGTTGAAGAGTGTCCCGGAGCATAGAGATAAAGAGAGAGTAGGCTCAACAGGCTAAAGAGTGGAAATGGAGTAGGGAGATAGTGAGAGAATAGGCTGAAGATTCAATCAAGAGAAGTGAGTGACTCAACACACTATATTGGGATAGAGAAGCCTAGAGGTGCTTGATGGCCTAAGTTGAGATATAAAACCCTACAGAGATAAAAACAAGTAGGGATGAAGTATGTGTGATGGCGAGCTTACCTAAAATTTTGGGTTCCCTTTTCTTGGGGCTGCAACTATGGTTTTAACTTAGAAAAATAGTGTAAAGTATAGTGCATGTTGCCATAGTATTGCTTACTACCTCCATATTTATGCAGTCTTAACACTATTTGGCATTTTAAATTGCAGCTATTATAGCCCTTGCCTTTGCTACCATCCACACTTTCTCCATGGTTATTGCATTCAGTGGATATGAAGAAGGAAACAAAGTGGACCAGTGTTTCGCTCCTGTTGTTCACTTAATTGCTGGCATGTTGGTAAGTATCCACATAATTGTGTATGCATACTTGAAGAGTGCAAACTAAACCTGTCGAGCAAACCAACTACTAAACTGAATGATACTACAGATCTTGTAACCGAAACTTTCCTAAATAGATCTGCTAGTTTTTTGGAGGGCTCTAGCATGAAATCAATATAGAAGCAGATAGTTTTAGCATTTGGTGTGGCTTCTGAATTATTTTGGATTAAAATGTACAAAGTCAATCATAACAGGTTACTTACATTCTTGGTTACCGAGAGTTATAGCTTCTACGTTTTTGATGCGCGAATATCTATAGTACAGGATCTCCAAAGAGGTCCATTTCTTCTTATTTCCTTGAAATCAGTGACTTGACCCATACTATTCAATGTCACTTGCTGATTTCATCTAATGTAGCACAGTTGATCGAGTTTATCAATCGTGCTTCCCTCTGTAGATTTACTATTTCGATGAAAAACTCGAGCAATGTGAGTGCATTTTTTGATTAAATGACGATTGATGATCTCTGGTTTGTTTTCAGACACTGACGAATCTTGCATTTGGAGGCTGCATGATTGGCATTCCACTCCTCTATTGTGTAGCAATCGTGACCTTGGTACATTGCGGAAAGATGGCATGGAGGAGATTGATAGAAAGCCGAAACAGGGAGGGGAAC</genome_strand>
        <mrna_strand>CTGGAGGATATATTGGATGCATTTGCTGACAGAGTCTCTAAACCTCGCCTCTTTATGACGGACAAGATGCAAATTGCTCTTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGGGTTTGGGACATGGTGTGGCTCATGCTGTGTTTTTCTGCCTTGGCCTTTTGACACCTGCATTTGGACCAGCGACATACTATGTAGAGAAATGCTCAAAGATACCCTTTTTTCTTGTTTCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTATAGCCCTTGCCTTTGCTACCATTCACACTTTCTCCATGGTTATTGCGTTCAGTGGATATGAAGAAGGAAACAAAGTGGACCAGTGTTTTGCTCCTGTTGTTCACTTAATTGCTGGCATGTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTGACGAATCTTGCATTTGGAGGCTACATGATTGGCATTCCACTTCTCTATTGTGTAGCAATCGTGACCTTGGTACATTGCGGAAAGATGGCATGGAGGAGATTGATAGAAAGCCGAAGCAGGGAGGGAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E431096" ref_strand="-" ref_description="SGN-E431096 [STM-54-L24]">
      <seq>gcccttgcctttgctaccattcacactatctccatggttattgcgttcagtggatatgaagaaggaaacaaagtggaccagtgttttgctcctgttgttcacttaattgctggcatgttgacactgacgaatcttgcatttggaggctgcatgattggcattccacttctctattgtgtagcaatcgtgaccttggtacattgcggaaagatggcatggaggagattgatagaaagccgaagcagggagggaaacttcagcaatagccagtaagcaaggataataacctttttcgttatgactgagaagtgtaagataagtaattgccagatatgtctgatgcatggagcatttgtcaagggtgactcaaaggagagactagtaaaagccttcgctttaggcctccaaaaataattcatagtcgactttatattggccaaatacatatacagccactcaaactttacaggaattttcattgtaacacctaacatttgccttgtacctattgaacacctaatgttgcaaaaatttgtgtctattcaacactcgtacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="115919" stop="117595"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116219" g_stop="116338" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="120" r_length="120" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116339" i_stop="116860" i_length="522">
            <donor d_prob="0.930" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116861" g_stop="117295" g_length="435"/>
          <reference_exon_boundary r_type="cDNA" r_start="121" r_stop="556" r_length="436" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E431096" ref_strand="-">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E431096" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="116219" e_stop="116338"/>
          <exon e_start="116861" e_stop="117295"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCCTTGCCTTTGCTACCATCCACACTTTCTCCATGGTTATTGCATTCAGTGGATATGAAGAAGGAAACAAAGTGGACCAGTGTTTCGCTCCTGTTGTTCACTTAATTGCTGGCATGTTGGTAAGTATCCACATAATTGTGTATGCATACTTGAAGAGTGCAAACTAAACCTGTCGAGCAAACCAACTACTAAACTGAATGATACTACAGATCTTGTAACCGAAACTTTCCTAAATAGATCTGCTAGTTTTTTGGAGGGCTCTAGCATGAAATCAATATAGAAGCAGATAGTTTTAGCATTTGGTGTGGCTTCTGAATTATTTTGGATTAAAATGTACAAAGTCAATCATAACAGGTTACTTACATTCTTGGTTACCGAGAGTTATAGCTTCTACGTTTTTGATGCGCGAATATCTATAGTACAGGATCTCCAAAGAGGTCCATTTCTTCTTATTTCCTTGAAATCAGTGACTTGACCCATACTATTCAATGTCACTTGCTGATTTCATCTAATGTAGCACAGTTGATCGAGTTTATCAATCGTGCTTCCCTCTGTAGATTTACTATTTCGATGAAAAACTCGAGCAATGTGAGTGCATTTTTTGATTAAATGACGATTGATGATCTCTGGTTTGTTTTCAGACACTGACGAATCTTGCATTTGGAGGCTGCATGATTGGCATTCCACTCCTCTATTGTGTAGCAATCGTGACCTTGGTACATTGCGGAAAGATGGCATGGAGGAGATTGATAGAAAGCCGAAACAGGGAGGGGAACTTCAGCAATAGCCAATAAGCAAGGATAATAACCTTTTTTG-TATTACTGAGAAGTGTAAGATTAGTAATTGCCAGATATATCTAATGCTTGGAGCATTTGCCAAGGGTGACTCAAAGAAGAGACTAGT-AAATCTTTTGTTTTAGGCCTCCAAAAATATTTCATAGTCAACTTTATATTGGCCAAATAAATATTCGGGCCACTCAAACTTTACATGAATTTTCGTTGTAACACCTAACATTTGCCTTGTACCTATTGAACACCTAATATTACAAGAATTTATGTCTATTCAATAATCGTACC</genome_strand>
        <mrna_strand>GCCCTTGCCTTTGCTACCATTCACACTATCTCCATGGTTATTGCGTTCAGTGGATATGAAGAAGGAAACAAAGTGGACCAGTGTTTTGCTCCTGTTGTTCACTTAATTGCTGGCATGTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTGACGAATCTTGCATTTGGAGGCTGCATGATTGGCATTCCACTTCTCTATTGTGTAGCAATCGTGACCTTGGTACATTGCGGAAAGATGGCATGGAGGAGATTGATAGAAAGCCGAAGCAGGGAGGGAAACTTCAGCAATAGCCAGTAAGCAAGGATAATAACCTTTTTCGTTATGACTGAGAAGTGTAAGATAAGTAATTGCCAGATATGTCTGATGCATGGAGCATTTGTCAAGGGTGACTCAAAGGAGAGACTAGTAAAAGCCTTCGCTTTAGGCCTCCAAAAATAATTCATAGTCGACTTTATATTGGCCAAATACATATAC-AGCCACTCAAACTTTACAGGAATTTTCATTGTAACACCTAACATTTGCCTTGTACCTATTGAACACCTAATGTTGCAAAAATTTGTGTCTATTCAACACTCGTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E302546" ref_strand="+" ref_description="SGN-E302546 [cLEX-1-K1](-)">
      <seq>gggaggggaacttcagcaatagccaataagcaaggataataaccttttttgtattactgagaagtgtaagattagtaattgccagatatatctaatgcttggagcatttgccaagggtgactcaaagaagagactagtaaatcttttgttttaggcctccaaaaatatttcatagtcaactttatattggccaaataaatattcgggccactcaaactttacatgaattttcgttgtaacacctaacatttgccttgtacctattgaacacctaatattacaagaatttatgtctattcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="116685" stop="117588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116985" g_stop="117293" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="309" r_length="309" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E302546" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>309</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E302546" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116985" e_stop="117293"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGAGGGGAACTTCAGCAATAGCCAATAAGCAAGGATAATAACCTTTTTTGTATTACTGAGAAGTGTAAGATTAGTAATTGCCAGATATATCTAATGCTTGGAGCATTTGCCAAGGGTGACTCAAAGAAGAGACTAGTAAATCTTTTGTTTTAGGCCTCCAAAAATATTTCATAGTCAACTTTATATTGGCCAAATAAATATTCGGGCCACTCAAACTTTACATGAATTTTCGTTGTAACACCTAACATTTGCCTTGTACCTATTGAACACCTAATATTACAAGAATTTATGTCTATTCAATAATCGTA</genome_strand>
        <mrna_strand>GGGAGGGGAACTTCAGCAATAGCCAATAAGCAAGGATAATAACCTTTTTTGTATTACTGAGAAGTGTAAGATTAGTAATTGCCAGATATATCTAATGCTTGGAGCATTTGCCAAGGGTGACTCAAAGAAGAGACTAGTAAATCTTTTGTTTTAGGCCTCCAAAAATATTTCATAGTCAACTTTATATTGGCCAAATAAATATTCGGGCCACTCAAACTTTACATGAATTTTCGTTGTAACACCTAACATTTGCCTTGTACCTATTGAACACCTAATATTACAAGAATTTATGTCTATTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E302552" ref_strand="+" ref_description="SGN-E302552 [cLEX-1-K7](-)">
      <seq>gggaggggaacttcagcaatagccaataagcaaggataataaccttttttgtattactgagaagtgtaagattagtaattgccagatatatctaatgcttggagcatttgccaagggtgactcaaagaagagactagtaaatcttttgttttaggcctccaaaaatatttcatagtcaactttatattggccaaataaatattcgggccactcaaactttacatgaattttcgttgtaacacctaacatttgccttgtacctattgaacacctaatattacaagaatttatgtctattcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="116685" stop="117588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116985" g_stop="117293" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="309" r_length="309" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E302552" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>309</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E302552" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116985" e_stop="117293"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGAGGGGAACTTCAGCAATAGCCAATAAGCAAGGATAATAACCTTTTTTGTATTACTGAGAAGTGTAAGATTAGTAATTGCCAGATATATCTAATGCTTGGAGCATTTGCCAAGGGTGACTCAAAGAAGAGACTAGTAAATCTTTTGTTTTAGGCCTCCAAAAATATTTCATAGTCAACTTTATATTGGCCAAATAAATATTCGGGCCACTCAAACTTTACATGAATTTTCGTTGTAACACCTAACATTTGCCTTGTACCTATTGAACACCTAATATTACAAGAATTTATGTCTATTCAATAATCGTA</genome_strand>
        <mrna_strand>GGGAGGGGAACTTCAGCAATAGCCAATAAGCAAGGATAATAACCTTTTTTGTATTACTGAGAAGTGTAAGATTAGTAATTGCCAGATATATCTAATGCTTGGAGCATTTGCCAAGGGTGACTCAAAGAAGAGACTAGTAAATCTTTTGTTTTAGGCCTCCAAAAATATTTCATAGTCAACTTTATATTGGCCAAATAAATATTCGGGCCACTCAAACTTTACATGAATTTTCGTTGTAACACCTAACATTTGCCTTGTACCTATTGAACACCTAATATTACAAGAATTTATGTCTATTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E302551" ref_strand="+" ref_description="SGN-E302551 [cLEX-1-K7]">
      <seq>ggaggggaacttcagcaatagccaataagcaaggataataaccttttttgtattactgagaagtgtaagattagtaattgccagatatatctaatgcttggagcatttgccaagggtgactcaaagaagagactagtaaatcttttgttttaggcctccaaaaatatttcatagtcaactttatattggccaaataaatattcgggccactcaaactttacatgaattttcgttgtaacacctaacatttgccttgtacctattgaacacctaatattacaagaatttatgtctattcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="116686" stop="117588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116986" g_stop="117294" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="309" r_length="309" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E302551" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>309</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E302551" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116986" e_stop="117294"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGGGGAACTTCAGCAATAGCCAATAAGCAAGGATAATAACCTTTTTTGTATTACTGAGAAGTGTAAGATTAGTAATTGCCAGATATATCTAATGCTTGGAGCATTTGCCAAGGGTGACTCAAAGAAGAGACTAGTAAATCTTTTGTTTTAGGCCTCCAAAAATATTTCATAGTCAACTTTATATTGGCCAAATAAATATTCGGGCCACTCAAACTTTACATGAATTTTCGTTGTAACACCTAACATTTGCCTTGTACCTATTGAACACCTAATATTACAAGAATTTATGTCTATTCAATAATCGTAC</genome_strand>
        <mrna_strand>GGAGGGGAACTTCAGCAATAGCCAATAAGCAAGGATAATAACCTTTTTTGTATTACTGAGAAGTGTAAGATTAGTAATTGCCAGATATATCTAATGCTTGGAGCATTTGCCAAGGGTGACTCAAAGAAGAGACTAGTAAATCTTTTGTTTTAGGCCTCCAAAAATATTTCATAGTCAACTTTATATTGGCCAAATAAATATTCGGGCCACTCAAACTTTACATGAATTTTCGTTGTAACACCTAACATTTGCCTTGTACCTATTGAACACCTAATATTACAAGAATTTATGTCTATTCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E302545" ref_strand="+" ref_description="SGN-E302545 [cLEX-1-K1]">
      <seq>ggaactttttaaatacccaataagcaaggataataacgtgttttgtattactgagaagtgtaagattagtaattgccagatatatctaatgcttggagcatttgccaagggtgactcaaagaagagactagtaaatcttttgttttaggcctccaaaaatatttcataggcaactttatattggccaaataaatattcgggccactcaaactttacatgaattttcgttgtaacacctaacatttgccttgtacctattgaacacctaatattacaagaatttatgtctattcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="116702" stop="117588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116991" g_stop="117294" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="304" r_length="304" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E302545" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>304</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E302545" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116991" e_stop="117294"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAACTTCAGCAATAGCCAATAAGCAAGGATAATAACCTTTTTTGTATTACTGAGAAGTGTAAGATTAGTAATTGCCAGATATATCTAATGCTTGGAGCATTTGCCAAGGGTGACTCAAAGAAGAGACTAGTAAATCTTTTGTTTTAGGCCTCCAAAAATATTTCATAGTCAACTTTATATTGGCCAAATAAATATTCGGGCCACTCAAACTTTACATGAATTTTCGTTGTAACACCTAACATTTGCCTTGTACCTATTGAACACCTAATATTACAAGAATTTATGTCTATTCAATAATCGTAC</genome_strand>
        <mrna_strand>GGAACTTTTTAAATACCCAATAAGCAAGGATAATAACGTGTTTTGTATTACTGAGAAGTGTAAGATTAGTAATTGCCAGATATATCTAATGCTTGGAGCATTTGCCAAGGGTGACTCAAAGAAGAGACTAGTAAATCTTTTGTTTTAGGCCTCCAAAAATATTTCATAGGCAACTTTATATTGGCCAAATAAATATTCGGGCCACTCAAACTTTACATGAATTTTCGTTGTAACACCTAACATTTGCCTTGTACCTATTGAACACCTAATATTACAAGAATTTATGTCTATTCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E324058" ref_strand="+" ref_description="SGN-E324058 [cTOC-3-M23]">
      <seq>ttgctttaatgaatgccatgggtactgtagtgggaatttacctcattgatcactttggacgcaaaaagttggcattgacaagcttatccggtgtaattgtgtccttgattctcctagctgtagcatttttcttagagtcatctacttcaggcaatgttggggcttatgggtggattgctgtaataggcttagccctctatattgctttctttgcacctggtatgggtcctgtcccatggacagtgaactcagaaatatacccagagtcctacagaggaatgtgtggtggcatgtctgctactgtcaactggatatcaaatcttatagtggcccagagtttcctatccttagccgaggctgtgggcacaggtgttactttcttgatactagctggtatagcagtgatggcatttgtgtttgtcgccgtgttcgtgccagagaccaagggcttgtcatttgaggaaatggaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="123723" stop="124793"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="124023" g_stop="124493" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="471" r_length="471" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E324058" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E324058" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="124023" e_stop="124493"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCTTTAATGAATGCCATGGGTACTGTAGTGGGAATTTACCTCATTGATCACTTTGGACGCAAAAAGTTGGCATTGACAAGCTTATCCGGTGTAATTGTGTCCTTGATTCTCCTAGCTGTAGCATTTTTCTTAGAGTCATCTACTTCAGGCAATGTTGGGGCTTATGGGTGGATTGCTGTAATAGGCTTAGCCCTCTATATTGCTTTCTTTGCACCTGGTATGGGTCCTGTCCCATGGACAGTGAACTCAGAAATATACCCAGAGTCCTACAGAGGAATGTGTGGTGGCATGTCTGCTACTGTCAACTGGATATCAAATCTTATAGTGGCCCAGAGTTTCCTATCCTTAGCCGAGGCTGTGGGCACAGGTGTTACTTTCTTGATACTAGCTGGTATAGCAGTGATGGCATTTGTGTTTGTCGCCGTGTTCGTGCCAGAGACCAAGGGCTTGTCATTTGAGGAAATGGAGA</genome_strand>
        <mrna_strand>TTGCTTTAATGAATGCCATGGGTACTGTAGTGGGAATTTACCTCATTGATCACTTTGGACGCAAAAAGTTGGCATTGACAAGCTTATCCGGTGTAATTGTGTCCTTGATTCTCCTAGCTGTAGCATTTTTCTTAGAGTCATCTACTTCAGGCAATGTTGGGGCTTATGGGTGGATTGCTGTAATAGGCTTAGCCCTCTATATTGCTTTCTTTGCACCTGGTATGGGTCCTGTCCCATGGACAGTGAACTCAGAAATATACCCAGAGTCCTACAGAGGAATGTGTGGTGGCATGTCTGCTACTGTCAACTGGATATCAAATCTTATAGTGGCCCAGAGTTTCCTATCCTTAGCCGAGGCTGTGGGCACAGGTGTTACTTTCTTGATACTAGCTGGTATAGCAGTGATGGCATTTGTGTTTGTCGCCGTGTTCGTGCCAGAGACCAAGGGCTTGTCATTTGAGGAAATGGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E201320" ref_strand="+" ref_description="SGN-E201320 [cLEC-4-M9]">
      <seq>aattgcgtccttgattctcctagctgtagcatttttcttagagtcatctacttcaggcaatgttggggcttatgggtggattgctgtaataggcttagccctctatattgctttctttgcacctggtatgggtcctgtcccatggacagtgaactcagaaatatacccagagtcctacagaggaatgtgtggtggcatgtctgctactgtcaactggatatcaaatcttatagtggcccagagtttcctatccttagccgaggctgggggcacaggtgttactttcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="123817" stop="124705"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="124117" g_stop="124405" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="289" r_length="289" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E201320" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>289</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E201320" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="124117" e_stop="124405"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGTGTCCTTGATTCTCCTAGCTGTAGCATTTTTCTTAGAGTCATCTACTTCAGGCAATGTTGGGGCTTATGGGTGGATTGCTGTAATAGGCTTAGCCCTCTATATTGCTTTCTTTGCACCTGGTATGGGTCCTGTCCCATGGACAGTGAACTCAGAAATATACCCAGAGTCCTACAGAGGAATGTGTGGTGGCATGTCTGCTACTGTCAACTGGATATCAAATCTTATAGTGGCCCAGAGTTTCCTATCCTTAGCCGAGGCTGTGGGCACAGGTGTTACTTTCTTG</genome_strand>
        <mrna_strand>AATTGCGTCCTTGATTCTCCTAGCTGTAGCATTTTTCTTAGAGTCATCTACTTCAGGCAATGTTGGGGCTTATGGGTGGATTGCTGTAATAGGCTTAGCCCTCTATATTGCTTTCTTTGCACCTGGTATGGGTCCTGTCCCATGGACAGTGAACTCAGAAATATACCCAGAGTCCTACAGAGGAATGTGTGGTGGCATGTCTGCTACTGTCAACTGGATATCAAATCTTATAGTGGCCCAGAGTTTCCTATCCTTAGCCGAGGCTGGGGGCACAGGTGTTACTTTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E202645" ref_strand="+" ref_description="SGN-E202645 [cLEC-19-B5]">
      <seq>acttcttgaatcaagaagctagtctaaaagaatcttatggcatcttcattgtcaggtggtgtgtggtacaccgacatcaatactcagtgaaaattaacaagtatattatgtgtacgcacctttacctctacctttgttgtaccaccttgtatattatggatcaatgcaatgtaatgtggttgaggggaattttgcaactgcgtttattaaagctttggttgcaagttccccaatcgatgtgataggtcctctagtagtactagtctttcttcttttttttttgtatcaaagctggtgaaggtctaggaaaacattgaacgactttgctctagactttttgagcttaattgtattattatctaattaattaaaaaaattgtttggacgcaattatattttatatacagagtattttaatatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="124240" stop="125260"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="124540" g_stop="124960" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="421" r_length="421" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E202645" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E202645" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="124540" e_stop="124960"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTCTTGAATCAAGAAGCTAGTCTAAAAGAATCTTATGGCATCTTCATTGTCAGGTGGTGTGTGGTACACCGACATCAATACTCAGTGAAAATTAACAAGTATATTATGTGTACGCACCTTTACCTCTACCTTTGTTGTACCACCTTGTATATTATGGATCAATGCAATGTAATGTGGTTGAGGGGAATTTTGCAACTGCGTTTATTAAAGCTTTGGTTGCAAGTTCCCCAATCGATGTGATAGGTCCTCTAGTAGTACTAGTCTTTCTTCTTTTTTTTTTGTATCAAAGCTGGTGAAGGTCTAGGAAAACATTGAACGACTTTGCTCTAGACTTTTTGAGCTTAATTGTATTATTATCTAATTAATTAAAAAAATTGTTTGGACGCAATTATATTTTATATACAGAGTATTTTAATATT</genome_strand>
        <mrna_strand>ACTTCTTGAATCAAGAAGCTAGTCTAAAAGAATCTTATGGCATCTTCATTGTCAGGTGGTGTGTGGTACACCGACATCAATACTCAGTGAAAATTAACAAGTATATTATGTGTACGCACCTTTACCTCTACCTTTGTTGTACCACCTTGTATATTATGGATCAATGCAATGTAATGTGGTTGAGGGGAATTTTGCAACTGCGTTTATTAAAGCTTTGGTTGCAAGTTCCCCAATCGATGTGATAGGTCCTCTAGTAGTACTAGTCTTTCTTCTTTTTTTTTTGTATCAAAGCTGGTGAAGGTCTAGGAAAACATTGAACGACTTTGCTCTAGACTTTTTGAGCTTAATTGTATTATTATCTAATTAATTAAAAAAATTGTTTGGACGCAATTATATTTTATATACAGAGTATTTTAATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E723254" ref_strand="+" ref_description="SGN-E723254 [FC19DG09]">
      <seq>cccatggggatccgatgattgtgaacaaagtgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcaaacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaantcccccccctaaggggcccctttaatttttttttagggcccccaaaaaatggggggaaaaacgggggaaaaattttttccgggggaaaatttttccccaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125193" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125484" g_stop="125636" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="154" r_length="154" r_score="0.941"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="254" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127132" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="460" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127133" i_stop="127954" i_length="822">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="127955" g_stop="127969" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="475" r_length="15" r_score="0.867"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="127970" i_stop="128297" i_length="328">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="487" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="128310" i_stop="130302" i_length="1993">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="130303" g_stop="130326" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="488" r_stop="511" r_length="24" r_score="0.750"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="130327" i_stop="132043" i_length="1717">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.990" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="132044" g_stop="132060" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="512" r_stop="528" r_length="17" r_score="0.588"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="132061" i_stop="137302" i_length="5242">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.75"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="137303" g_stop="137386" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="612" r_length="84" r_score="0.750"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E723254" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>611</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E723254" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125484" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127132"/>
          <exon e_start="127955" e_stop="127969"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="130303" e_stop="130326"/>
          <exon e_start="132044" e_stop="132060"/>
          <exon e_start="137303" e_stop="137386"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCAAAATCATCC-CTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATATGTTGATATCATTTTCTCAACTTTTATATTCGATTAGGAAAAGTAATTGAGAATTTAATCGATTATTTATTCGTGTATATACTATGTTGAGATCATTTTCTCAACTTGTATTTGAATAATGTAATGCAGTATTATGTATGTGTTAGTAAATTTAACGAATCGATCGAAATTATCATTAACTTCTAAACTAAATAAAATGAATGAAATGATTTTAGCCATTATATTATTAAACGATGAAAAACAAGTTGGTGCCAAAATTTAAAATAAAAATGAAAAAATCAAATATTATAACTTGTGGTCCAAGATGTTTCGAAGGTGATTGATATATTTATGTGAAATAGTACAACATCATGTCAATGTACTAATCAATATGTCAATTGATTTAATCATAATTTACAAAATAAATGACATTTTTTTGTATTCAATTATCAATTTAACTTTAGCTTCTCATTTTATTCATTAAATAAATTATAACCACATAAATTTTTCTTATAACTTTTCTTTCTTTAATTATTAAGATTTTTTCAAGTAGATCTCTTTAAATTACAAGTTTCAATATTTTTATTTAAAATTTTTATATTTAATTAAAAAACCTTCGGATAAATTGAGACGAAATGAGTAACAAAATATTTTTCTTAGACAAAATTATGACAAGTAGGACAATTGAGAACCATAGGATAAAATTGATGATTGTGTTCACAATTTATTACCAAATACCAATCACATGTCTCATGTGTGACTTGACATGTTTCATACGGCGTATTTTTATTATTTTTTCTTTTGTTTTCAAACTTAAAATACACAATTTTATCAGATATATCTATTATGATCATTATCTAAAAGGTTAATTTATTATCTTTTCATAATAATTTATTATCTCAATGTTATAGTAACGAAAAACATTGAGATAGTCGATATCGTTACAGTCACTCTACATATTTTAACTAATTAAACGTTAGAGTATAATATGAAATTACAAGAATTTAATTTAAAAAAATTGAGAAATCGAAGAATATAAGAATAATTTACATATCATTTTAAAAGCATGTTTTGTTGGTTGAATTATAATTGACAAATAAAAATGATATTCTTTTAAGGGAAAATTGTGTATAATAGCAAACTAATAACCTAAATTAAATGGAATAGCTAGGGTTTGATTTAATTTAATTGTGCTCCATAGCAAACATAAGCTAAAATTTGCCAGCGTCTCTCTCCCAAAAATCTCGCTCGCCACTCTCCATTCTCGCTCGCCTCTCTCGCTTTATACACAGAAGTGTATAATTCTGTTTTTGTTTTGTATAGAGCGAGAGAAAATTGTATATACAATTGCGAATTATACAATTGCAGTGAAATACAATTTTCTCTAGCTTTATACAACAGAAGTGTATACATTGTGTTCCTGTTTTTGTATAAAGCGAGAGAAACATATATCTTCTTGCTATACACTTATAATTAGGCAACATACATACATTTTAATTCAATTCAACTGTATGCAAAACAAATTATACAATTGCAGCGAAATAGGCCAGTGAATTATACAATTATATATGTATAGCAGATTATACAGTTTTATGTGTGCTATGGAGCGCAATTATGTAAAGTTTGTTATACCATACAAATATAAATTTTTCATTTGCTATATGTAAAAGTTGCACTTCTTTTAAAGACGGACTAGTAAGGTAATTTAATTTTTTTTTGTCTCTTATTTTGCAAAGAAAACAGGTCCTTTAATGGGCCAGGGACCGTTGGACTTGTGGATTTGAAGGAGTTTGCTGAGTGGGCTGATTAAGACTAGCCACGTGGGTTGTTGGAATACCTCTTGTCTTCTAGTGAACCCCATATGCCAAATTATTGTTGTCAACGTGGCCATCAATATGGGACCCACACATTTTATGCTACCATACCCCACCCCCCACCCCCACCACCCTACCCCATGTAGAAAAGCTACTATCATGCATCATCATCATGATACATAATGATGTTGGATGTGATATATGGGTATTTTCACGACGTAATATATAAACGTGTTCTTTCATTTCATCTCAGCTGGTATCTATGTCTTTTAACTTTGTGTGTAGACAAGTAAACATGCTTTTAAAGTAATAAGAAAAATTATTCTTATGTGGCAAAATACAAATCAGTTTGAGTGTATATCATCTTCGTGATACATGATGATGAAGATTGTGATACGTGGGTATTTTCACGATATTATATATAAACGTGTTTTTTAATTTCATCTCAACTGGTATCTATGTCTTTCAGCTTTGGATAGGTAAAATTAAATACTCAAACTTATGTTATATAATCTATGTAGCATAATTTCGAAATAATATAATGTATATCACGTAATGTATATAACTTTATATAAATTTTTAAATATTATTTTATACATAACTAAAATAAAAGAATATAGATATCAGTTAAAGTCGATGTATGATATAATTTCTTTTTATTTTTATTTTTTTGTATGGATTTAGAAGACTTGGAGATTGACCCACATTATCTTCTTTAAATTAGCTTTATTTTGTGGTTCAATCAAACTTGGTTGCTATATTGGTTGTCCCTTTTTGTATTTTTGTTCTTTTGTTCCATAGGAGTTGGATCTAACTAATACAAATCAATTTTTAACATAAATTATGCAATTATTTAAGGCTCAAATAAAATATTACCACTAAACTTTCTCTTTCGTAAAAGTCATTTCACCAAAAAGTTCTATATAATATTACCTTTTTTAACCCAAAAAAGGCAATTAGTGACCTTAAAAATTAAGTTTAATTCGGATTAGGAAATTGTCATCATCTTTTGGTAATTTATTATATAAAAATAATGGCTTAATGGTCAAAATTCATAACTTAAATGACACGTATCATAAAATATTTTTAGGCTTATATTATTATAATAATAATAATATTATGTTTCTTTCTCTTTCGTAGTAGTCATTTTACAAAAAAAGCTATATATTATATTTTTCTTTTTACCAAAAAGAGCAGTTAATAATAATTAATTTAGAAAAATGAAGACTTGTTTGCCAAACGATAAAAGTTCTTTTTAATCTTATTTGGATTATAAATCGTCACCTCCTAATTATTTTATTCTATAATACTTTTAGGATATGATTCAATATATTAAAAACCCATCACTTGAATAACACGTATCATCAATTATTTCAGGCACAAATGATAATAATATCTTTTTTTCTTTTTAGTGAAAGTCATTTTTACCTTAAAAAAAACAGTTATTAATCAAGAAAAAATATTAAAATTATTGCTTCCTTTTAAAACAATAAAATTGTTATAAATACACCGTATTGAATATATCAGTATTTACTAAATCAGCTTATAATTAAGTACGTAGTAAAATTACACAACTGAGTTCTAAAGAGGATAAATATTAAATAAATTTTATCATTGCTTTATGGAGATAGATAGACTACTTCGAAAGATTCTCTACTTACGTCCAACACCAACATACAAATTCTAAAAAGTGACTTTTGCAATCAAATAAGTAGCTTAAACAAACCGCATCTNNTCATTTTCGATAAATTTTGAGCTGTTATTAATAATATAACGTTCCTTATTTTATATTTAACAAAAAGTAAAATGAAAAAAAAATATATAAAAGTTGTAATATATAATGGACCAATCATAATACAACAGGTATATAATCAATTAAAAGAACATTTATGGGGTTCTCTTTTCTATAGTGCTCCATACTAAAAATTCCAATGTAACATATACATTATAACTATAAAGGTGATGTTGCAACTAATAAGAAAACATATCTAACAGAGGCAAATTCAGTATTTAAAGATTAATGAGACAGTTATTATTTTAATATATGTCTAAGCAAAACTTCTAATAATGATTAAGAAGTAATATCGTGTGATATGTGTTAAATATAAGTGCTATAATACGATTGAATTATGCATCACAGAAAATATCTTCAAACTATATACACAATATTTTTTGAAACAAATATACGTGCGCCCTCGCTTATATATATATGTTGGGAAATTTATTTTATTTTTTATTGAAAAAATTATTTTAAAAAAGAGAGTTTTATTCTTTTTGTTGAAGAAAATTAGTTGTAATTAACACACAGCAAAACTGAGCTGGAAGGTCAAAATTGCTTAGAAATAAATTAAGACAGGGTGGAAAAAAGAATATTTACCTAAAAAGAATGATTGAAGTGGTTTACATTACTCGATAAAGAATCTGATTATGTTCGAATCATATAATATAATAATAATAACAGGTGTAATATTTTTATTTATTTAATTATAATGTATAAGATTTGTATTATATACTCAATCATTGACAAGTTGAAAGTATTTAATTTTTCTTCTTCTCCACATAATAACACCAAACATATCATGAGGACTCCTGAAGATCCCCATAATATGCGGATCAAACATTTATATAATAAAATGAGATAAGACGCATAAAAAATTAAATAAAAATATAAGTTACTGTCATCAAAATATATTGTTACGATTACGATTATCACTATCAATTATCATTACAATAATCAACTGCACAATTAATATATCACTGAATCACTATAATTATTCACCATTAACATATTTATGTATCTATCACTATGAATAACCATTGTTAGTGACTAATATCAACCAACATTACCATTAATTACTATCGAACAGTTAACGTCAATCAATACTATTCTCAATCGACGTCTACGAATCATCAATATATTGTCATAGTTTTTTTAAAAAAATATGTATTTATACAAACATATAGTATCAAACTAATTTAGTATTTTATTTAAATATTATATTTATTATTATTATTAAATATATATTCAAACATGAAAAATAAATAATTCCAATTATTTAAATATAAATCTTAATAATCAGAGAATTTAAACATCTAAATCTCTATATGTATTTTAATTAAGTTAGAAGCTTAATCTTTAACAAACAAAACTAGGTCTTAAATAATCTTGAAGTTAAAGTATCATAATGGCCTCTATACGAAGCTTATTTATGTTAATTGCTAGTCACCTATATATAACGCAAAAAATAAGTCACCCTGCTATTTTTTTGGTTTTTAAGAAAATGATATACAATTTCTTTTAGTCAGTTTCGAAAAAAAAGATCTTTTTTTTTATAGCGATATTTTAATTTCAACTTTCATATGACATATATCTAAGATCACAATATTAAAAAATATTTTGATATATTTGACATAACTATAATTTAGAATCATTGAATCAAATTTTTTTTATTTTTTTTAAAAAATTTCATATCAAAACTCAATAATTCTATTTTAAACAAATGAAGTAAGCTTGCTAATTTTTTTAATACCAATTTGTCTAGCAGTTCATTGGCTTACATTTGCGTGACTGTATTGCCAATGGTTCTTTTTTTTTTTTTAAAGAAAAATAAAATACATAAGTAATCAGTATGAGTTTATGGGTTTTATTTATTTTATATTCTTGGTAGAGTATGTATGAGTTTATGATTCTTATCTATATATAAAAATATAATAATTTCCCATGGATTCTGCTTGATATTCGGAAAATAACTGATTAAACTATGAGATTTTTTCTATTTATATACTATATATATATATATATATATATATATATATATATGGAGTTAACATTTATAGGCATATGACAATTATTATAATTAAAGCCTTTAAATGTCTAGTGTTTCTATTAGGGCTGTGTATCGGTTGGTTCAGTTTGGTTTTAAAGTTTAACGGGTTGGCTTATTGATTATCGGTTTGTAGAGATGCTAAACCGTTATAGAACCATTAAGATATTGGCTTATCGGTTATTGATTTTTCGGTTTTTGATCTTTATCGGTTCGGTTATCGATTTAACCATTAAGATTTGACACAAAAGAAAAAACATTGAAAATCACTTAGAAACAAGGTGACAAACCAAATAAACCACGCACTTGAGTTCACAAGTTACATCTTGCTCAAAAGCAAACACTTTTACATTGTAGAATAATCAAGTGTTTGAGATAATAAAAAATAAAAGTAGGAAATTAAACTCCTAGTCGAGGACTTTATATGCAAAATGATATAAATATAATTATTTTAATTTACTATCGGGTTGTCAGTTAACCCATTAAGAAAAAACTTTAAACCGTTAAGAACCAATAACCCGATAACAAAAAAAATCAAAATTGTTATCAAAACCACTAATCCAATAACCCAATACTACAAATCAATAACTTTTTTATCGGTTCGGCTTATCGGTTTCGGTTCGATTTTGAACGGCCCTAGTTTAAACCGTTAAGAACCAATAACCCGATAACAAAAAAAATCAAAACTGTTATCAAAACCACTAATCCAATAACCCAATACTAGAAATCAATAACTTTTTTATCGGTTCGACTTATCGATTTCGGTTCGATTTTGAACGGCCCTAGTTTACATTGGTAGAGCTAAATTTTGTTTGAGGTAAGTTAAATTAATATCGATCAAAAAATTATACTATATATTATTTTTCAAAATATATATCAAAATTTCTTGATTTTTTCCTTGCGTTTTATTTTTTAAAGAAATGGAGGGAGACTAGTGCAAAGACATGCAAAATATTGTCCTAGAGAAAATGGATATAATCTCATGAAATATGAAGCTATGTGGATTAAAATGCTGAATAATCTTTATATATGAATAAAAAGAGAAATTATTAATTATTCTGTTTTCTTAATAAACAAATCCAAGTCTTATCTTAAACTAGACAGGATACAGTCACCATTAATTAAGTTGCTTACAATAGGGGCATCAGAAAAAAAAAGGGCAAAATTGTATATAATCACTCATTTTGATTAAATATATGTGGTTGAAATTTTTCATTCTCGTATACATTAATATATTCAGCGAAATTTTACAAATAAAGTCTGAAAGGTAAAATATATGTATCCCTTATTCATACAACGTAGAAATAAAAGAGACTATTTCTTAAAGATTCTTCGCGCAAATACAAAAATTAAACATTCTAATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</genome_strand>
        <mrna_strand>CCCATGGGGATCCGATGATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAAACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAA........................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAANTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCCCTAAGGGGCCCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAATTTTTTTTTAGGGCCCCCAAAAAATGGGGGGAAAAACGGGGGAAAAATTTTTTCCGGGGGAAAATTTTTCCCCAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E220076" ref_strand="+" ref_description="SGN-E220076 [cLEL-12-D4](-)">
      <seq>caaaatcatccctcattgtgaacaaagtgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttaataaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125186" stop="127454"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125486" g_stop="125636" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="151" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="251" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127152" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="477" r_length="226" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="479" polyA_stop="494"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E220076" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E220076" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125486" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127152"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCATCCCTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAG</genome_strand>
        <mrna_strand>CAAAATCATCCCTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E717948" ref_strand="+" ref_description="SGN-E717948 [FC03AG12]">
      <seq>cggccaaatcggccgaattgcctcattgtgaacaaagtgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctataaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125194" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125496" g_stop="125636" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="161" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="261" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127137" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="472" r_length="211" r_score="0.995"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127138" i_stop="128297" i_length="1160">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="484" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="129869" i_length="1560">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="129870" g_stop="129896" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="511" r_length="27" r_score="0.667"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E717948" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E717948" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125496" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127137"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="129870" e_stop="129896"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATA</genome_strand>
        <mrna_strand>CCTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E721453" ref_strand="+" ref_description="SGN-E721453 [FC13DH03]">
      <seq>aatcggccgaattgctcattgtgaacaaagtgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcaaacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagattttcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125193" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125497" g_stop="125636" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="154" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="254" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127160" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="488" r_length="234" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127161" i_stop="128297" i_length="1137">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="500" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="130581" i_length="2272">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="130582" g_stop="130607" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="501" r_stop="526" r_length="26" r_score="0.731"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E721453" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E721453" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125497" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127160"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="130582" e_stop="130607"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATATGTTGATATCATTTTCTCAACTTTTATATTCGATTAGGAAAAGTAATTGAGAATTTAATCGATTATTTATTCGTGTATATACTATGTTGAGATCATTTTCTCAACTTGTATTTGAATAATGTAATGCAGTATTATGTATGTGTTAGTAAATTTAACGAATCGATCGAAATTATCATTAACTTCTAAACTAAATAAAATGAATGAAATGATTTTAGCCATTATATTATTAAACGATGAAAAACAAGTTGGTGCCAAAATTTAAAATAAAAATGAAAAAATCAAATAT</genome_strand>
        <mrna_strand>CTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAAACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E717572" ref_strand="+" ref_description="SGN-E717572 [FC02AE05]">
      <seq>aatcggccgaattccatggggatccgatctcattgtgaacaaagtgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125197" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125497" g_stop="125636" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="168" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="268" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127133" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="475" r_length="207" r_score="0.995"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127134" i_stop="128016" i_length="883">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.64"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128017" g_stop="128067" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="526" r_length="51" r_score="0.647"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128068" i_stop="128297" i_length="230">
            <donor d_prob="0.000" d_score="0.64"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="538" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="128310" i_stop="130300" i_length="1991">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="130301" g_stop="130321" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="559" r_length="21" r_score="0.857"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E717572" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E717572" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125497" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127133"/>
          <exon e_start="128017" e_stop="128067"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="130301" e_stop="130321"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATA</genome_strand>
        <mrna_strand>CTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA......................................................................................................................................................................................................................................ACAAAAAAAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E720949" ref_strand="+" ref_description="SGN-E720949 [FC12BD03]">
      <seq>agggcgattggcggccaatcggccgaattgctcattgtgaacaaagtgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcaaacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125193" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125497" g_stop="125636" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="170" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="270" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127152" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="496" r_length="226" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127153" i_stop="128016" i_length="864">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.64"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128017" g_stop="128068" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="497" r_stop="548" r_length="52" r_score="0.654"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E720949" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>518</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E720949" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125497" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127152"/>
          <exon e_start="128017" e_stop="128068"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAA</genome_strand>
        <mrna_strand>CTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAAACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E720952" ref_strand="+" ref_description="SGN-E720952 [FC12BD07]">
      <seq>gcggccaaatcggccgaattcccatggggatccgatgctcattgtgaacaaagtgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcaaacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacaaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125197" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125497" g_stop="125636" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="177" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="277" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127153" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="504" r_length="227" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127154" i_stop="128016" i_length="863">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.64"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128017" g_stop="128068" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="556" r_length="52" r_score="0.654"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E720952" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="0.933" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E720952" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125497" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127153"/>
          <exon e_start="128017" e_stop="128068"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAA</genome_strand>
        <mrna_strand>CTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAAACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACAAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E719382" ref_strand="+" ref_description="SGN-E719382 [FC07CG07]">
      <seq>gattgtgaacaaagtcatttaagcaaaagtagggttttcttgcaaacacatcgcgcaccctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcaaacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacaagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaannnccccccccttatggcccccttttttttttttttttggcccccaaaaaaccgggggggaaaaaaaaaaaaaaatttttccgggggggattttttcccccaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125200" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125499" g_stop="125636" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="138" r_length="138" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="238" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127081" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="393" r_length="155" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127082" i_stop="128297" i_length="1216">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="405" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="132036" i_length="3727">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.839" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="132037" g_stop="132043" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="412" r_length="7" r_score="0.714"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="132044" i_stop="133907" i_length="1864">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="133908" g_stop="133941" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="446" r_length="34" r_score="0.765"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="133942" i_stop="136212" i_length="2271">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.244" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="136213" g_stop="136219" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="453" r_length="7" r_score="0.714"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="136220" i_stop="137282" i_length="1063">
            <donor d_prob="0.377" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.46"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="137283" g_stop="137402" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="454" r_stop="573" r_length="120" r_score="0.458"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E719382" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E719382" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125499" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127081"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="132037" e_stop="132043"/>
          <exon e_start="133908" e_stop="133941"/>
          <exon e_start="136213" e_stop="136219"/>
          <exon e_start="137283" e_stop="137402"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATATGTTGATATCATTTTCTCAACTTTTATATTCGATTAGGAAAAGTAATTGAGAATTTAATCGATTATTTATTCGTGTATATACTATGTTGAGATCATTTTCTCAACTTGTATTTGAATAATGTAATGCAGTATTATGTATGTGTTAGTAAATTTAACGAATCGATCGAAATTATCATTAACTTCTAAACTAAATAAAATGAATGAAATGATTTTAGCCATTATATTATTAAACGATGAAAAACAAGTTGGTGCCAAAATTTAAAATAAAAATGAAAAAATCAAATATTATAACTTGTGGTCCAAGATGTTTCGAAGGTGATTGATATATTTATGTGAAATAGTACAACATCATGTCAATGTACTAATCAATATGTCAATTGATTTAATCATAATTTACAAAATAAATGACATTTTTTTGTATTCAATTATCAATTTAACTTTAGCTTCTCATTTTATTCATTAAATAAATTATAACCACATAAATTTTTCTTATAACTTTTCTTTCTTTAATTATTAAGATTTTTTCAAGTAGATCTCTTTAAATTACAAGTTTCAATATTTTTATTTAAAATTTTTATATTTAATTAAAAAACCTTCGGATAAATTGAGACGAAATGAGTAACAAAATATTTTTCTTAGACAAAATTATGACAAGTAGGACAATTGAGAACCATAGGATAAAATTGATGATTGTGTTCACAATTTATTACCAAATACCAATCACATGTCTCATGTGTGACTTGACATGTTTCATACGGCGTATTTTTATTATTTTTTCTTTTGTTTTCAAACTTAAAATACACAATTTTATCAGATATATCTATTATGATCATTATCTAAAAGGTTAATTTATTATCTTTTCATAATAATTTATTATCTCAATGTTATAGTAACGAAAAACATTGAGATAGTCGATATCGTTACAGTCACTCTACATATTTTAACTAATTAAACGTTAGAGTATAATATGAAATTACAAGAATTTAATTTAAAAAAATTGAGAAATCGAAGAATATAAGAATAATTTACATATCATTTTAAAAGCATGTTTTGTTGGTTGAATTATAATTGACAAATAAAAATGATATTCTTTTAAGGGAAAATTGTGTATAATAGCAAACTAATAACCTAAATTAAATGGAATAGCTAGGGTTTGATTTAATTTAATTGTGCTCCATAGCAAACATAAGCTAAAATTTGCCAGCGTCTCTCTCCCAAAAATCTCGCTCGCCACTCTCCATTCTCGCTCGCCTCTCTCGCTTTATACACAGAAGTGTATAATTCTGTTTTTGTTTTGTATAGAGCGAGAGAAAATTGTATATACAATTGCGAATTATACAATTGCAGTGAAATACAATTTTCTCTAGCTTTATACAACAGAAGTGTATACATTGTGTTCCTGTTTTTGTATAAAGCGAGAGAAACATATATCTTCTTGCTATACACTTATAATTAGGCAACATACATACATTTTAATTCAATTCAACTGTATGCAAAACAAATTATACAATTGCAGCGAAATAGGCCAGTGAATTATACAATTATATATGTATAGCAGATTATACAGTTTTATGTGTGCTATGGAGCGCAATTATGTAAAGTTTGTTATACCATACAAATATAAATTTTTCATTTGCTATATGTAAAAGTTGCACTTCTTTTAAAGACGGACTAGTAAGGTAATTTAATTTTTTTTTGTCTCTTATTTTGCAAAGAAAACAGGTCCTTTAATGGGCCAGGGACCGTTGGACTTGTGGATTTGAAGGAGTTTGCTGAGTGGGCTGATTAAGACTAGCCACGTGGGTTGTTGGAATACCTCTTGTCTTCTAGTGAACCCCATATGCCAAATTATTGTTGTCAACGTGGCCATCAATATGGGACCCACACATTTTATGCTACCATACCCCACCCCCCACCCCCACCACCCTACCCCATGTAGAAAAGCTACTATCATGCATCATCATCATGATACATAATGATGTTGGATGTGATATATGGGTATTTTCACGACGTAATATATAAACGTGTTCTTTCATTTCATCTCAGCTGGTATCTATGTCTTTTAACTTTGTGTGTAGACAAGTAAACATGCTTTTAAAGTAATAAGAAAAATTATTCTTATGTGGCAAAATACAAATCAGTTTGAGTGTATATCATCTTCGTGATACATGATGATGAAGATTGTGATACGTGGGTATTTTCACGATATTATATATAAACGTGTTTTTTAATTTCATCTCAACTGGTATCTATGTCTTTCAGCTTTGGATAGGTAAAATTAAATACTCAAACTTATGTTATATAATCTATGTAGCATAATTTCGAAATAATATAATGTATATCACGTAATGTATATAACTTTATATAAATTTTTAAATATTATTTTATACATAACTAAAATAAAAGAATATAGATATCAGTTAAAGTCGATGTATGATATAATTTCTTTTTATTTTTATTTTTTTGTATGGATTTAGAAGACTTGGAGATTGACCCACATTATCTTCTTTAAATTAGCTTTATTTTGTGGTTCAATCAAACTTGGTTGCTATATTGGTTGTCCCTTTTTGTATTTTTGTTCTTTTGTTCCATAGGAGTTGGATCTAACTAATACAAATCAATTTTTAACATAAATTATGCAATTATTTAAGGCTCAAATAAAATATTACCACTAAACTTTCTCTTTCGTAAAAGTCATTTCACCAAAAAGTTCTATATAATATTACCTTTTTTAACCCAAAAAAGGCAATTAGTGACCTTAAAAATTAAGTTTAATTCGGATTAGGAAATTGTCATCATCTTTTGGTAATTTATTATATAAAAATAATGGCTTAATGGTCAAAATTCATAACTTAAATGACACGTATCATAAAATATTTTTAGGCTTATATTATTATAATAATAATAATATTATGTTTCTTTCTCTTTCGTAGTAGTCATTTTACAAAAAAAGCTATATATTATATTTTTCTTTTTACCAAAAAGAGCAGTTAATAATAATTAATTTAGAAAAATGAAGACTTGTTTGCCAAACGATAAAAGTTCTTTTTAATCTTATTTGGATTATAAATCGTCACCTCCTAATTATTTTATTCTATAATACTTTTAGGATATGATTCAATATATTAAAAACCCATCACTTGAATAACACGTATCATCAATTATTTCAGGCACAAATGATAATAATATCTTTTTTTCTTTTTAGTGAAAGTCATTTTTACCTTAAAAAAAACAGTTATTAATCAAGAAAAAATATTAAAATTATTGCTTCCTTTTAAAACAATAAAATTGTTATAAATACACCGTATTGAATATATCAGTATTTACTAAATCAGCTTATAATTAAGTACGTAGTAAAATTACACAACTGAGTTCTAAAGAGGATAAATATTAAATAAATTTTATCATTGCTTTATGGAGATAGATAGACTACTTCGAAAGATTCTCTACTTACGTCCAACACCAACATACAAATTCTAAAAAGTGACTTTTGCAATCAAATAAGTAGCTTAAACAAACCGCATCTNNTCATTTTCGATAAATTTTGAGCTGTTATTAATAATATAACGTTCCTTATTTTATATTTAACAAAAAGTAAAATGAAAAAAAAATATATAAAAGTTGTAATATATAATGGACCAATCATAATACAACAGGTATATAATCAATTAAAAGAACATTTATGGGGTTCTCTTTTCTATAGTGCTCCATACTAAAAATTCCAATGTAACATATACATTATAACTATAAAGGTGATGTTGCAACTAATAAGAAAACATATCTAACAGAGGCAAATTCAGTATTTAAAGATTAATGAGACAGTTATTATTTTAATATATGTCTAAGCAAAACTTCTAATAATGATTAAGAAGTAATATCGTGTGATATGTGTTAAATATAAGTGCTATAATACGATTGAATTATGCATCACAGAAAATATCTTCAAACTATATACACAATATTTTTTGAAACAAATATACGTGCGCCCTCGCTTATATATATATGTTGGGAAATTTATTTTATTTTTTATTGAAAAAATTATTTTAAAAAAGAGAGTTTTATTCTTTTTGTTGAAGAAAATTAGTTGTAATTAACACACAGCAAAACTGAGCTGGAAGGTCAAAATTGCTTAGAAATAAATTAAGACAGGGTGGAAAAAAGAATATTTACCTAAAAAGAATGATTGAAGTGGTTTACATTACTCGATAAAGAATCTGATTATGTTCGAATCATATAATATAATAATAATAACAGGTGTAATATTTTTATTTATTTAATTATAATGTATAAGATTTGTATTATATACTCAATCATTGACAAGTTGAAAGTATTTAATTTTTCTTCTTCTCCACATAATAACACCAAACATATCATGAGGACTCCTGAAGATCCCCATAATATGCGGATCAAACATTTATATAATAAAATGAGATAAGACGCATAAAAAATTAAATAAAAATATAAGTTACTGTCATCAAAATATATTGTTACGATTACGATTATCACTATCAATTATCATTACAATAATCAACTGCACAATTAATATATCACTGAATCACTATAATTATTCACCATTAACATATTTATGTATCTATCACTATGAATAACCATTGTTAGTGACTAATATCAACCAACATTACCATTAATTACTATCGAACAGTTAACGTCAATCAATACTATTCTCAATCGACGTCTACGAATCATCAATATATTGTCATAGTTTTTTTAAAAAAATATGTATTTATACAAACATATAGTATCAAACTAATTTAGTATTTTATTTAAATATTATATTTATTATTATTATTAAATATATATTCAAACATGAAAAATAAATAATTCCAATTATTTAAATATAAATCTTAATAATCAGAGAATTTAAACATCTAAATCTCTATATGTATTTTAATTAAGTTAGAAGCTTAATCTTTAACAAACAAAACTAGGTCTTAAATAATCTTGAAGTTAAAGTATCATAATGGCCTCTATACGAAGCTTATTTATGTTAATTGCTAGTCACCTATATATAACGCAAAAAATAAGTCACCCTGCTATTTTTTTGGTTTTTAAGAAAATGATATACAATTTCTTTTAGTCAGTTTCGAAAAAAAAGATCTTTTTTTTTATAGCGATATTTTAATTTCAACTTTCATATGACATATATCTAAGATCACAATATTAAAAAATATTTTGATATATTTGACATAACTATAATTTAGAATCATTGAATCAAATTTTTTTTATTTTTTTTAAAAAATTTCATATCAAAACTCAATAATTCTATTTTAAACAAATGAAGTAAGCTTGCTAATTTTTTTAATACCAATTTGTCTAGCAGTTCATTGGCTTACATTTGCGTGACTGTATTGCCAATGGTTCTTTTTTTTTTTTTAAAGAAAAATAAAATACATAAGTAATCAGTATGAGTTTATGGGTTTTATTTATTTTATATTCTTGGTAGAGTATGTATGAGTTTATGATTCTTATCTATATATAAAAATATAATAATTTCCCATGGATTCTGCTTGATATTCGGAAAATAACTGATTAAACTATGAGATTTTTTCTATTTATATACTATATATATATATATATATATATATATATATATATGGAGTTAACATTTATAGGCATATGACAATTATTATAATTAAAGCCTTTAAATGTCTAGTGTTTCTATTAGGGCTGTGTATCGGTTGGTTCAGTTTGGTTTTAAAGTTTAACGGGTTGGCTTATTGATTATCGGTTTGTAGAGATGCTAAACCGTTATAGAACCATTAAGATATTGGCTTATCGGTTATTGATTTTTCGGTTTTTGATCTTTATCGGTTCGGTTATCGATTTAACCATTAAGATTTGACACAAAAGAAAAAACATTGAAAATCACTTAGAAACAAGGTGACAAACCAAATAAACCACGCACTTGAGTTCACAAGTTACATCTTGCTCAAAAGCAAACACTTTTACATTGTAGAATAATCAAGTGTTTGAGATAATAAAAAATAAAAGTAGGAAATTAAACTCCTAGTCGAGGACTTTATATGCAAAATGATATAAATATAATTATTTTAATTTACTATCGGGTTGTCAGTTAACCCATTAAGAAAAAACTTTAAACCGTTAAGAACCAATAACCCGATAACAAAAAAAATCAAAATTGTTATCAAAACCACTAATCCAATAACCCAATACTACAAATCAATAACTTTTTTATCGGTTCGGCTTATCGGTTTCGGTTCGATTTTGAACGGCCCTAGTTTAAACCGTTAAGAACCAATAACCCGATAACAAAAAAAATCAAAACTGTTATCAAAACCACTAATCCAATAACCCAATACTAGAAATCAATAACTTTTTTATCGGTTCGACTTATCGATTTCGGTTCGATTTTGAACGGCCCTAGTTTACATTGGTAGAGCTAAATTTTGTTTGAGGTAAGTTAAATTAATATCGATCAAAAAATTATACTATATATTATTTTTCAAAATATATATCAAAATTTCTTGATTTTTTCCTTGCGTTTTATTTTTTAAAGAAATGGAGGGAGACTAGTGCAAAGACATGCAAAATATTGTCCTAGAGAAAATGGATATAATCTCATGAAATATGAAGCTATGTGGATTAAAATGCTGAATAATCTTTATATATGAATAAAAAGAGAAATTATTAATTATTCTGTTTTCTTAATAAACAAATCCAAGTCTTATCTTAAACTAGACAGGATACAGTCACCATTAATTAAGTTGCTTACAATAGGGGCATCAGAAAAAAAAAGGGCAAAATTGTATATAATCACTCATTTTGATTAAATATATGTGGTTGAAATTTTTCATTCTCGTATACATTAATATATTCAGCGAAATTTTACAAATAAAGTCTGAAAGGTAAAATATATGTATCCCTTATTCATACAACGTAGAAATAAAAGAGACTATTTCTTAAAGATTCTTCGCGCAAATACAAAAATTAAACATTCTAATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</genome_strand>
        <mrna_strand>GATTGTGAACAAAGTCATTTAAGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCACCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAAACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACAAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAANNNCCCCCCCCTTATGGCCCCCTTTTTTTTTTTTTTTTGGCCCCCAAAAAACCGGGGGGGAAAAAAAAAAAAAAATTTTTCCGGGGGGGATTTTTTCCCCCAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E724875" ref_strand="+" ref_description="SGN-E724875 [FC25BF08]">
      <seq>gattgtgaacaaagtgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcaaacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaancccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125200" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125499" g_stop="125636" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="138" r_length="138" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="238" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127152" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="464" r_length="226" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127153" i_stop="128297" i_length="1145">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="476" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="130302" i_length="1993">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="130303" g_stop="130326" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="500" r_length="24" r_score="0.708"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="130327" i_stop="131211" i_length="885">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.738" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="131212" g_stop="131225" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="501" r_stop="514" r_length="14" r_score="0.500"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E724875" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>514</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E724875" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125499" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127152"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="130303" e_stop="130326"/>
          <exon e_start="131212" e_stop="131225"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATATGTTGATATCATTTTCTCAACTTTTATATTCGATTAGGAAAAGTAATTGAGAATTTAATCGATTATTTATTCGTGTATATACTATGTTGAGATCATTTTCTCAACTTGTATTTGAATAATGTAATGCAGTATTATGTATGTGTTAGTAAATTTAACGAATCGATCGAAATTATCATTAACTTCTAAACTAAATAAAATGAATGAAATGATTTTAGCCATTATATTATTAAACGATGAAAAACAAGTTGGTGCCAAAATTTAAAATAAAAATGAAAAAATCAAATATTATAACTTGTGGTCCAAGATGTTTCGAAGGTGATTGATATATTTATGTGAAATAGTACAACATCATGTCAATGTACTAATCAATATGTCAATTGATTTAATCATAATTTACAAAATAAATGACATTTTTTTGTATTCAATTATCAATTTAACTTTAGCTTCTCATTTTATTCATTAAATAAATTATAACCACATAAATTTTTCTTATAACTTTTCTTTCTTTAATTATTAAGATTTTTTCAAGTAGATCTCTTTAAATTACAAGTTTCAATATTTTTATTTAAAATTTTTATATTTAATTAAAAAACCTTCGGATAAATTGAGACGAAATGAGTAACAAAATATTTTTCTTAGACAAAATTATGACAAGTAGGACAATTGAGAACCATAGGATAAAATTGATGATTGTGTTCACAATTTATTACCAAATACCAATCACATGTCTCATGTGTGACTTGACATGTTTCATACGGCGTATTTTTATTATTTTTTCTTTTGTTTTCAAACTTAAAATACACAATTTTATCAGATATATCTATTATGATCATTATCTAAAAGGTTAATTTATTATCTTTTCATAATAATTTATTATCTCAATGTTATAGTAACGAAAAACATT</genome_strand>
        <mrna_strand>GATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAAACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAANCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E718466" ref_strand="+" ref_description="SGN-E718466 [FC04DA08]">
      <seq>gattgtgaacaaagtgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcaaacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagattttcaagttcaacttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125200" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125499" g_stop="125636" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="138" r_length="138" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="238" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127170" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="482" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127171" i_stop="128297" i_length="1127">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="494" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="130302" i_length="1993">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="130303" g_stop="130326" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="495" r_stop="518" r_length="24" r_score="0.708"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="130327" i_stop="130574" i_length="248">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="130575" g_stop="130604" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="519" r_stop="548" r_length="30" r_score="0.733"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E718466" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>548</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E718466" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125499" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127170"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="130303" e_stop="130326"/>
          <exon e_start="130575" e_stop="130604"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATATGTTGATATCATTTTCTCAACTTTTATATTCGATTAGGAAAAGTAATTGAGAATTTAATCGATTATTTATTCGTGTATATACTATGTTGAGATCATTTTCTCAACTTGTATTTGAATAATGTAATGCAGTATTATGTATGTGTTAGTAAATTTAACGAATCGATCGAAATTATCATTAACTTCTAAACTAAATAAAATGAATGAAATGATTTTAGCCATTATATTATTAAACGATGAAAAACAAGTTGGTGCCAAAATTTAAAATAAAAATGAAAAAATCAAA</genome_strand>
        <mrna_strand>GATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAAACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAA........................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E717505" ref_strand="+" ref_description="SGN-E717505 [FC01BG05]">
      <seq>gggcgattggcggccaatcggccgaattgattgtgaacaaagtgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125198" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125500" g_stop="125636" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="166" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="266" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127133" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="473" r_length="207" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127134" i_stop="128016" i_length="883">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.64"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128017" g_stop="128068" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="474" r_stop="525" r_length="52" r_score="0.654"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E717505" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E717505" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125500" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127133"/>
          <exon e_start="128017" e_stop="128068"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAA</genome_strand>
        <mrna_strand>ATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E726603" ref_strand="+" ref_description="SGN-E726603 [LA12BC02]">
      <seq>gaggaaagtgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125205" stop="127445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125505" g_stop="125636" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="132" r_length="132" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="232" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127144" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="450" r_length="218" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="451" polyA_stop="464"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E726603" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>450</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E726603" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125505" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127144"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTA</genome_strand>
        <mrna_strand>GAGGAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E712446" ref_strand="+" ref_description="SGN-E712446 [FB04DE06]">
      <seq>aacaaagtgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagataaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125206" stop="127454"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125506" g_stop="125636" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="131" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="231" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127152" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="457" r_length="226" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="458" polyA_stop="476"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E712446" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>457</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E712446" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125506" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127152"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAG</genome_strand>
        <mrna_strand>AACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E623363" ref_strand="+" ref_description="SGN-E623363 [88454]">
      <seq>caaaagtgagttctgcagaagtagggttttcttacaaacacatcgcgcagcctcgcttttctgccttgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatcttcaatatgagcttctacgaggacctctacatttggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttcaacttttggaagtgaactgctatgtggacctaagaaagactagctttttaaatttaatattttgttctatacattactaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125209" stop="127445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125507" g_stop="125636" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="135" r_length="135" r_score="0.892"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="235" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127153" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="458" r_length="223" r_score="0.894"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E623363" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>457</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E623363" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125507" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127153"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGC-TTT-T--C-TGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGA</genome_strand>
        <mrna_strand>CAAAAGTGAGTTCTGCAGAAGTAGGGTTTTCTTACAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTTCAATATGAGCTTCTACGAGGACCTCTACATTTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTCAACTTTTGGAAGTGAACTGCTATGTGGACCTAAGAAAGACTAGCTTTTTAAATTTAATATTTTGTTCTATACATTACTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E623364" ref_strand="+" ref_description="SGN-E623364 [88455]">
      <seq>caaaagtgagttctgcagaagtagggttttcttacaaacacatcgcgcagcctcgcttttctgccttgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatcttcaatatgagcttctacgaggacctctacatttggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttcaacttttggaagtgaactgctatgtggacctaagaaagactagctttttaaatttaatattttgttctatacattactaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125209" stop="127445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125507" g_stop="125636" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="135" r_length="135" r_score="0.892"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="235" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127153" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="458" r_length="223" r_score="0.894"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E623364" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>457</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E623364" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125507" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127153"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGC-TTT-T--C-TGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGA</genome_strand>
        <mrna_strand>CAAAAGTGAGTTCTGCAGAAGTAGGGTTTTCTTACAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTTCAATATGAGCTTCTACGAGGACCTCTACATTTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTCAACTTTTGGAAGTGAACTGCTATGTGGACCTAAGAAAGACTAGCTTTTTAAATTTAATATTTTGTTCTATACATTACTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E610322" ref_strand="-" ref_description="SGN-E610322 [57480]">
      <seq>caaaagtgagttctgcagaagtagggttttcttacaaacacatcgcgcagcctcgcttttctgccttgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatcttcaatatgagcttctacgaggacctctacatttggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttcaacttttggaagtgaactgctatgtggacctaagaaagactagctttttaaatttaatattttgttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125209" stop="127433"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125507" g_stop="125636" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="135" r_length="135" r_score="0.892"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="235" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127133" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="438" r_length="203" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E610322" ref_strand="-">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>437</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E610322" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="125507" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127133"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGC-TTT-T--C-TGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCT</genome_strand>
        <mrna_strand>CAAAAGTGAGTTCTGCAGAAGTAGGGTTTTCTTACAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTTCAATATGAGCTTCTACGAGGACCTCTACATTTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTCAACTTTTGGAAGTGAACTGCTATGTGGACCTAAGAAAGACTAGCTTTTTAAATTTAATATTTTGTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E348366" ref_strand="+" ref_description="SGN-E348366 [cTOF-27-I9]">
      <seq>aaagtgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagataaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125209" stop="127454"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125509" g_stop="125636" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="128" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="228" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127164" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="466" r_length="238" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E348366" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E348366" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125509" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127164"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTC</genome_strand>
        <mrna_strand>AAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E706132" ref_strand="+" ref_description="SGN-E706132 [FA29AD08]">
      <seq>gtgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagattttcaagttcaacttanaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacccccggggggggggccggaacccatttcccccaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125212" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125512" g_stop="125636" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="225" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127171" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="470" r_length="245" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127172" i_stop="128297" i_length="1126">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="482" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="137305" i_length="8996">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="137306" g_stop="137375" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="552" r_length="70" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E706132" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E706132" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125512" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127171"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="137306" e_stop="137375"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATATGTTGATATCATTTTCTCAACTTTTATATTCGATTAGGAAAAGTAATTGAGAATTTAATCGATTATTTATTCGTGTATATACTATGTTGAGATCATTTTCTCAACTTGTATTTGAATAATGTAATGCAGTATTATGTATGTGTTAGTAAATTTAACGAATCGATCGAAATTATCATTAACTTCTAAACTAAATAAAATGAATGAAATGATTTTAGCCATTATATTATTAAACGATGAAAAACAAGTTGGTGCCAAAATTTAAAATAAAAATGAAAAAATCAAATATTATAACTTGTGGTCCAAGATGTTTCGAAGGTGATTGATATATTTATGTGAAATAGTACAACATCATGTCAATGTACTAATCAATATGTCAATTGATTTAATCATAATTTACAAAATAAATGACATTTTTTTGTATTCAATTATCAATTTAACTTTAGCTTCTCATTTTATTCATTAAATAAATTATAACCACATAAATTTTTCTTATAACTTTTCTTTCTTTAATTATTAAGATTTTTTCAAGTAGATCTCTTTAAATTACAAGTTTCAATATTTTTATTTAAAATTTTTATATTTAATTAAAAAACCTTCGGATAAATTGAGACGAAATGAGTAACAAAATATTTTTCTTAGACAAAATTATGACAAGTAGGACAATTGAGAACCATAGGATAAAATTGATGATTGTGTTCACAATTTATTACCAAATACCAATCACATGTCTCATGTGTGACTTGACATGTTTCATACGGCGTATTTTTATTATTTTTTCTTTTGTTTTCAAACTTAAAATACACAATTTTATCAGATATATCTATTATGATCATTATCTAAAAGGTTAATTTATTATCTTTTCATAATAATTTATTATCTCAATGTTATAGTAACGAAAAACATTGAGATAGTCGATATCGTTACAGTCACTCTACATATTTTAACTAATTAAACGTTAGAGTATAATATGAAATTACAAGAATTTAATTTAAAAAAATTGAGAAATCGAAGAATATAAGAATAATTTACATATCATTTTAAAAGCATGTTTTGTTGGTTGAATTATAATTGACAAATAAAAATGATATTCTTTTAAGGGAAAATTGTGTATAATAGCAAACTAATAACCTAAATTAAATGGAATAGCTAGGGTTTGATTTAATTTAATTGTGCTCCATAGCAAACATAAGCTAAAATTTGCCAGCGTCTCTCTCCCAAAAATCTCGCTCGCCACTCTCCATTCTCGCTCGCCTCTCTCGCTTTATACACAGAAGTGTATAATTCTGTTTTTGTTTTGTATAGAGCGAGAGAAAATTGTATATACAATTGCGAATTATACAATTGCAGTGAAATACAATTTTCTCTAGCTTTATACAACAGAAGTGTATACATTGTGTTCCTGTTTTTGTATAAAGCGAGAGAAACATATATCTTCTTGCTATACACTTATAATTAGGCAACATACATACATTTTAATTCAATTCAACTGTATGCAAAACAAATTATACAATTGCAGCGAAATAGGCCAGTGAATTATACAATTATATATGTATAGCAGATTATACAGTTTTATGTGTGCTATGGAGCGCAATTATGTAAAGTTTGTTATACCATACAAATATAAATTTTTCATTTGCTATATGTAAAAGTTGCACTTCTTTTAAAGACGGACTAGTAAGGTAATTTAATTTTTTTTTGTCTCTTATTTTGCAAAGAAAACAGGTCCTTTAATGGGCCAGGGACCGTTGGACTTGTGGATTTGAAGGAGTTTGCTGAGTGGGCTGATTAAGACTAGCCACGTGGGTTGTTGGAATACCTCTTGTCTTCTAGTGAACCCCATATGCCAAATTATTGTTGTCAACGTGGCCATCAATATGGGACCCACACATTTTATGCTACCATACCCCACCCCCCACCCCCACCACCCTACCCCATGTAGAAAAGCTACTATCATGCATCATCATCATGATACATAATGATGTTGGATGTGATATATGGGTATTTTCACGACGTAATATATAAACGTGTTCTTTCATTTCATCTCAGCTGGTATCTATGTCTTTTAACTTTGTGTGTAGACAAGTAAACATGCTTTTAAAGTAATAAGAAAAATTATTCTTATGTGGCAAAATACAAATCAGTTTGAGTGTATATCATCTTCGTGATACATGATGATGAAGATTGTGATACGTGGGTATTTTCACGATATTATATATAAACGTGTTTTTTAATTTCATCTCAACTGGTATCTATGTCTTTCAGCTTTGGATAGGTAAAATTAAATACTCAAACTTATGTTATATAATCTATGTAGCATAATTTCGAAATAATATAATGTATATCACGTAATGTATATAACTTTATATAAATTTTTAAATATTATTTTATACATAACTAAAATAAAAGAATATAGATATCAGTTAAAGTCGATGTATGATATAATTTCTTTTTATTTTTATTTTTTTGTATGGATTTAGAAGACTTGGAGATTGACCCACATTATCTTCTTTAAATTAGCTTTATTTTGTGGTTCAATCAAACTTGGTTGCTATATTGGTTGTCCCTTTTTGTATTTTTGTTCTTTTGTTCCATAGGAGTTGGATCTAACTAATACAAATCAATTTTTAACATAAATTATGCAATTATTTAAGGCTCAAATAAAATATTACCACTAAACTTTCTCTTTCGTAAAAGTCATTTCACCAAAAAGTTCTATATAATATTACCTTTTTTAACCCAAAAAAGGCAATTAGTGACCTTAAAAATTAAGTTTAATTCGGATTAGGAAATTGTCATCATCTTTTGGTAATTTATTATATAAAAATAATGGCTTAATGGTCAAAATTCATAACTTAAATGACACGTATCATAAAATATTTTTAGGCTTATATTATTATAATAATAATAATATTATGTTTCTTTCTCTTTCGTAGTAGTCATTTTACAAAAAAAGCTATATATTATATTTTTCTTTTTACCAAAAAGAGCAGTTAATAATAATTAATTTAGAAAAATGAAGACTTGTTTGCCAAACGATAAAAGTTCTTTTTAATCTTATTTGGATTATAAATCGTCACCTCCTAATTATTTTATTCTATAATACTTTTAGGATATGATTCAATATATTAAAAACCCATCACTTGAATAACACGTATCATCAATTATTTCAGGCACAAATGATAATAATATCTTTTTTTCTTTTTAGTGAAAGTCATTTTTACCTTAAAAAAAACAGTTATTAATCAAGAAAAAATATTAAAATTATTGCTTCCTTTTAAAACAATAAAATTGTTATAAATACACCGTATTGAATATATCAGTATTTACTAAATCAGCTTATAATTAAGTACGTAGTAAAATTACACAACTGAGTTCTAAAGAGGATAAATATTAAATAAATTTTATCATTGCTTTATGGAGATAGATAGACTACTTCGAAAGATTCTCTACTTACGTCCAACACCAACATACAAATTCTAAAAAGTGACTTTTGCAATCAAATAAGTAGCTTAAACAAACCGCATCTNNTCATTTTCGATAAATTTTGAGCTGTTATTAATAATATAACGTTCCTTATTTTATATTTAACAAAAAGTAAAATGAAAAAAAAATATATAAAAGTTGTAATATATAATGGACCAATCATAATACAACAGGTATATAATCAATTAAAAGAACATTTATGGGGTTCTCTTTTCTATAGTGCTCCATACTAAAAATTCCAATGTAACATATACATTATAACTATAAAGGTGATGTTGCAACTAATAAGAAAACATATCTAACAGAGGCAAATTCAGTATTTAAAGATTAATGAGACAGTTATTATTTTAATATATGTCTAAGCAAAACTTCTAATAATGATTAAGAAGTAATATCGTGTGATATGTGTTAAATATAAGTGCTATAATACGATTGAATTATGCATCACAGAAAATATCTTCAAACTATATACACAATATTTTTTGAAACAAATATACGTGCGCCCTCGCTTATATATATATGTTGGGAAATTTATTTTATTTTTTATTGAAAAAATTATTTTAAAAAAGAGAGTTTTATTCTTTTTGTTGAAGAAAATTAGTTGTAATTAACACACAGCAAAACTGAGCTGGAAGGTCAAAATTGCTTAGAAATAAATTAAGACAGGGTGGAAAAAAGAATATTTACCTAAAAAGAATGATTGAAGTGGTTTACATTACTCGATAAAGAATCTGATTATGTTCGAATCATATAATATAATAATAATAACAGGTGTAATATTTTTATTTATTTAATTATAATGTATAAGATTTGTATTATATACTCAATCATTGACAAGTTGAAAGTATTTAATTTTTCTTCTTCTCCACATAATAACACCAAACATATCATGAGGACTCCTGAAGATCCCCATAATATGCGGATCAAACATTTATATAATAAAATGAGATAAGACGCATAAAAAATTAAATAAAAATATAAGTTACTGTCATCAAAATATATTGTTACGATTACGATTATCACTATCAATTATCATTACAATAATCAACTGCACAATTAATATATCACTGAATCACTATAATTATTCACCATTAACATATTTATGTATCTATCACTATGAATAACCATTGTTAGTGACTAATATCAACCAACATTACCATTAATTACTATCGAACAGTTAACGTCAATCAATACTATTCTCAATCGACGTCTACGAATCATCAATATATTGTCATAGTTTTTTTAAAAAAATATGTATTTATACAAACATATAGTATCAAACTAATTTAGTATTTTATTTAAATATTATATTTATTATTATTATTAAATATATATTCAAACATGAAAAATAAATAATTCCAATTATTTAAATATAAATCTTAATAATCAGAGAATTTAAACATCTAAATCTCTATATGTATTTTAATTAAGTTAGAAGCTTAATCTTTAACAAACAAAACTAGGTCTTAAATAATCTTGAAGTTAAAGTATCATAATGGCCTCTATACGAAGCTTATTTATGTTAATTGCTAGTCACCTATATATAACGCAAAAAATAAGTCACCCTGCTATTTTTTTGGTTTTTAAGAAAATGATATACAATTTCTTTTAGTCAGTTTCGAAAAAAAAGATCTTTTTTTTTATAGCGATATTTTAATTTCAACTTTCATATGACATATATCTAAGATCACAATATTAAAAAATATTTTGATATATTTGACATAACTATAATTTAGAATCATTGAATCAAATTTTTTTTATTTTTTTTAAAAAATTTCATATCAAAACTCAATAATTCTATTTTAAACAAATGAAGTAAGCTTGCTAATTTTTTTAATACCAATTTGTCTAGCAGTTCATTGGCTTACATTTGCGTGACTGTATTGCCAATGGTTCTTTTTTTTTTTTTAAAGAAAAATAAAATACATAAGTAATCAGTATGAGTTTATGGGTTTTATTTATTTTATATTCTTGGTAGAGTATGTATGAGTTTATGATTCTTATCTATATATAAAAATATAATAATTTCCCATGGATTCTGCTTGATATTCGGAAAATAACTGATTAAACTATGAGATTTTTTCTATTTATATACTATATATATATATATATATATATATATATATATATGGAGTTAACATTTATAGGCATATGACAATTATTATAATTAAAGCCTTTAAATGTCTAGTGTTTCTATTAGGGCTGTGTATCGGTTGGTTCAGTTTGGTTTTAAAGTTTAACGGGTTGGCTTATTGATTATCGGTTTGTAGAGATGCTAAACCGTTATAGAACCATTAAGATATTGGCTTATCGGTTATTGATTTTTCGGTTTTTGATCTTTATCGGTTCGGTTATCGATTTAACCATTAAGATTTGACACAAAAGAAAAAACATTGAAAATCACTTAGAAACAAGGTGACAAACCAAATAAACCACGCACTTGAGTTCACAAGTTACATCTTGCTCAAAAGCAAACACTTTTACATTGTAGAATAATCAAGTGTTTGAGATAATAAAAAATAAAAGTAGGAAATTAAACTCCTAGTCGAGGACTTTATATGCAAAATGATATAAATATAATTATTTTAATTTACTATCGGGTTGTCAGTTAACCCATTAAGAAAAAACTTTAAACCGTTAAGAACCAATAACCCGATAACAAAAAAAATCAAAATTGTTATCAAAACCACTAATCCAATAACCCAATACTACAAATCAATAACTTTTTTATCGGTTCGGCTTATCGGTTTCGGTTCGATTTTGAACGGCCCTAGTTTAAACCGTTAAGAACCAATAACCCGATAACAAAAAAAATCAAAACTGTTATCAAAACCACTAATCCAATAACCCAATACTAGAAATCAATAACTTTTTTATCGGTTCGACTTATCGATTTCGGTTCGATTTTGAACGGCCCTAGTTTACATTGGTAGAGCTAAATTTTGTTTGAGGTAAGTTAAATTAATATCGATCAAAAAATTATACTATATATTATTTTTCAAAATATATATCAAAATTTCTTGATTTTTTCCTTGCGTTTTATTTTTTAAAGAAATGGAGGGAGACTAGTGCAAAGACATGCAAAATATTGTCCTAGAGAAAATGGATATAATCTCATGAAATATGAAGCTATGTGGATTAAAATGCTGAATAATCTTTATATATGAATAAAAAGAGAAATTATTAATTATTCTGTTTTCTTAATAAACAAATCCAAGTCTTATCTTAAACTAGACAGGATACAGTCACCATTAATTAAGTTGCTTACAATAGGGGCATCAGAAAAAAAAAGGGCAAAATTGTATATAATCACTCATTTTGATTAAATATATGTGGTTGAAATTTTTCATTCTCGTATACATTAATATATTCAGCGAAATTTTACAAATAAAGTCTGAAAGGTAAAATATATGTATCCCTTATTCATACAACGTAGAAATAAAAGAGACTATTTCTTAAAGATTCTTCGCGCAAATACAAAAATTAAACATTCTAATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</genome_strand>
        <mrna_strand>GTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTAN......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCCGGGGGGGGGGCCGGAACCCATTTCCCCCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E614535" ref_strand="+" ref_description="SGN-E614535 [64323]">
      <seq>gtgagttctgcaaaagtagggtttcttacaaacacatcgcgcagcctcgcttttctgccttgtgaagatgggtcactctaacatctggaacgctcatccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatctctcatatgagcatctacggggacctctacatgtggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgtttaacttttggaagtgaactgctatgtggacctaagaaagactagcttttttaaatttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125212" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125512" g_stop="125636" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="0.896"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="229" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127124" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="423" r_length="194" r_score="0.884"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127125" i_stop="128297" i_length="1173">
            <donor d_prob="0.000" d_score="0.84"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="435" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="130300" i_length="1991">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="130301" g_stop="130322" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="436" r_stop="457" r_length="22" r_score="0.818"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E614535" ref_strand="+">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>457</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E614535" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125512" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127124"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="130301" e_stop="130322"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGC-TTT-T--C-TGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATAT</genome_strand>
        <mrna_strand>GTGAGTTCTGCAAAAGTAGGG-TTTCTTACAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCATCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTCTCATATGAGCATCTACGGGGACCTCTACATGTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTTAACTTTTGGAAGTGAACTGCTATGTGGACCTAAGAAAGACTAGCTTTTTTAAATTTAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E310192" ref_strand="+" ref_description="SGN-E310192 [cLEZ-8-B22]">
      <seq>gagggttctgcaaaagtagggttttcttgcaaacaccatcgcgccagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcaccccaaagaactaccgcccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtacccgttaaaaatcttgaatacgagtttctaccgaggaccctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagattttcaagttcaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125212" stop="127468"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125512" g_stop="125636" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="0.912"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.90"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="229" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127168" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="474" r_length="245" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E310192" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E310192" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125512" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127168"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACA-CATCGCG-CAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCA-CCCAAAGAACTA-CGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTA-CCGTTAAAAATCTTGAATACGAGTTTCTA-CGAGGA-CCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACT</genome_strand>
        <mrna_strand>GAGGGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACCATCGCGCCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCCAAAGAACTACCGCCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCCGTTAAAAATCTTGAATACGAGTTTCTACCGAGGACCCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E605319" ref_strand="+" ref_description="SGN-E605319 [21236]">
      <seq>gtgagtctgcagaagtagggttttcttacaaacacatcgcgcagcctcgcttttctgccttgtgaagatgggtcactctaacatctggaacgttcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatcttcaatatgagcttctacgaggacctctacatttggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttcaacttttggaagtgaactgctatgtggacctaagaaagactagctttttaaatttaatattttgttctatacattactaatttttagaacaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125212" stop="127453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125512" g_stop="125636" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="0.888"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="229" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127152" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="451" r_length="222" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="452" polyA_stop="464"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E605319" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>451</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E605319" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125512" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127152"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGC-TTT-T--C-TGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAG</genome_strand>
        <mrna_strand>GTGAG-TCTGCAGAAGTAGGGTTTTCTTACAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGTGAAGATGGGTCACTCTAACATCTGGAACGTTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTTCAATATGAGCTTCTACGAGGACCTCTACATTTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTCAACTTTTGGAAGTGAACTGCTATGTGGACCTAAGAAAGACTAGCTTTTTAAATTTAATATTTTGTTCTATACATTACTAATTTTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E457989" ref_strand="+" ref_description="SGN-E457989 [cPRO-4-G10]">
      <seq>gtgagttctgcaaaagtagggtttcttacaaacacatcgcgcagcctcgcttttctgccttgtgaagatgggtcactctaacatctggaacgctcatccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatctctcatatgagcatctacggggacctctacatgtggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgtttaacttttggaagtgaactgctatgtggacctaagaaagactagcttttttaaatttaatattttgttctataaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125212" stop="127413"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125512" g_stop="125636" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="0.896"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="229" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127141" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="441" r_length="212" r_score="0.874"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E457989" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>440</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E457989" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125512" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127141"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGC-TTT-T--C-TGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGC-TTTTAAGATTTTATATTTTGTTCTATACATTC</genome_strand>
        <mrna_strand>GTGAGTTCTGCAAAAGTAGGG-TTTCTTACAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCATCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTCTCATATGAGCATCTACGGGGACCTCTACATGTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTTAACTTTTGGAAGTGAACTGCTATGTGGACCTAAGAAAGACTAGCTTTTTTAAATTTAATATTTTGTTCTATAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E458143" ref_strand="+" ref_description="SGN-E458143 [cPRO-4-F18]">
      <seq>gtgagttctgcaaaagtagggtttcttacaaacacatcgcgcagcctcgcttttctgccttgtgaagatgggtcactctaacatctggaacgctcatccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatctctcatatgagcatctacggggacctctacatgtggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgtttaacttttggaagtgaactgctatgtggacctaagaaagactagcttttttaaatttaatattttgttctataaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125212" stop="127413"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125512" g_stop="125636" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="0.896"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="229" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127141" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="441" r_length="212" r_score="0.874"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E458143" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>440</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E458143" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125512" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127141"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGC-TTT-T--C-TGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGC-TTTTAAGATTTTATATTTTGTTCTATACATTC</genome_strand>
        <mrna_strand>GTGAGTTCTGCAAAAGTAGGG-TTTCTTACAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCATCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTCTCATATGAGCATCTACGGGGACCTCTACATGTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTTAACTTTTGGAAGTGAACTGCTATGTGGACCTAAGAAAGACTAGCTTTTTTAAATTTAATATTTTGTTCTATAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E461874" ref_strand="+" ref_description="SGN-E461874 [cPRO-9-J10]">
      <seq>gtgagttctgcaaaagtagggtttcttacaaacacatcgcgcagcctcgcttttctgccttgtgaagatgggtcactctaacatctggaacgctcatccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatctctcatatgagcatctacggggacctctacatgtggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgtttaacttttggaagtgaactgctatgtggacctaagaaagactagcttttttaaatttaatattttgttctataaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125212" stop="127413"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125512" g_stop="125636" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="0.896"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="229" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127141" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="441" r_length="212" r_score="0.874"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E461874" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>440</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E461874" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125512" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127141"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGC-TTT-T--C-TGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGC-TTTTAAGATTTTATATTTTGTTCTATACATTC</genome_strand>
        <mrna_strand>GTGAGTTCTGCAAAAGTAGGG-TTTCTTACAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCATCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTCTCATATGAGCATCTACGGGGACCTCTACATGTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTTAACTTTTGGAAGTGAACTGCTATGTGGACCTAAGAAAGACTAGCTTTTTTAAATTTAATATTTTGTTCTATAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E611680" ref_strand="+" ref_description="SGN-E611680 [61434]">
      <seq>ttgagtctgcaaaagtagggtttcttacaaacacatcgcgcagcctcgcttttctgccttgtgaagatgggtcactctaacatctggaacgctcatccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatctctcatatgagcatctacggggacctctacatgtggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgtttaacttttggaagtgaactgctatgtggacctaagaaagactagcttttttaaatttaatattttgttctataaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125213" stop="127413"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125512" g_stop="125636" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="128" r_length="128" r_score="0.880"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="228" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127137" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="436" r_length="208" r_score="0.886"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="437" polyA_stop="450"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E611680" ref_strand="+">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>436</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E611680" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125512" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127137"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGC-TTT-T--C-TGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGC-TTTTAAGATTTTATATTTTGTTCTATAC</genome_strand>
        <mrna_strand>TTGAG-TCTGCAAAAGTAGGG-TTTCTTACAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCATCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTCTCATATGAGCATCTACGGGGACCTCTACATGTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTTAACTTTTGGAAGTGAACTGCTATGTGGACCTAAGAAAGACTAGCTTTTTTAAATTTAATATTTTGTTCTATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E586177" ref_strand="+" ref_description="SGN-E586177 [60228]">
      <seq>gtgagttctgcaaaagtagggtttcttacaaacacatcgcgcagcctcgcttttctgccttgtgaagatgggtcactctaacatctggaacgctcatccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatctctcatatgagcatctacggggacctctacatgtggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgtttaacttttggaagtgaactgctatgtggacctaagaaagactagcttttttaaatttaatattttgttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125212" stop="127413"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125512" g_stop="125636" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="0.896"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="229" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127133" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="433" r_length="204" r_score="0.889"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E586177" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>432</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E586177" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125512" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127133"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGC-TTT-T--C-TGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGC-TTTTAAGATTTTATATTTTGTTCT</genome_strand>
        <mrna_strand>GTGAGTTCTGCAAAAGTAGGG-TTTCTTACAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCATCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTCTCATATGAGCATCTACGGGGACCTCTACATGTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTTAACTTTTGGAAGTGAACTGCTATGTGGACCTAAGAAAGACTAGCTTTTTTAAATTTAATATTTTGTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E303573" ref_strand="+" ref_description="SGN-E303573 [cLEY-6-A5](-)">
      <seq>gtgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125212" stop="127424"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125512" g_stop="125636" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="225" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127121" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="420" r_length="195" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="421" polyA_stop="435"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E303573" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>420</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E303573" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125512" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127121"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTT</genome_strand>
        <mrna_strand>GTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E459958" ref_strand="+" ref_description="SGN-E459958 [cPRO-29-D1]">
      <seq>gtgagttctgcaaaagtagggtttcttacaaacacatcgcgcatcctcgcttttctgccttgtgaagatgggtcactctaacatctggaacgctcatccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatctctcatatgagcatctacggggacctctacatgtggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgtttaacttttggaagtgaactgctatgtggacctaagaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125212" stop="127404"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125512" g_stop="125636" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="0.888"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="229" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127109" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="408" r_length="179" r_score="0.874"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E459958" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>408</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E459958" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125512" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127109"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGC-TTT-T--C-TGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGC</genome_strand>
        <mrna_strand>GTGAGTTCTGCAAAAGTAGGG-TTTCTTACAAACACATCGCGCATCCTCGCTTTTCTGCCTTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCATCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTCTCATATGAGCATCTACGGGGACCTCTACATGTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTTAACTTTTGGAAGTGAACTGCTATGTGGACCTAAGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E734080" ref_strand="+" ref_description="SGN-E734080 [LB11CH09]">
      <seq>agggttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacccgggggggggggccggaccccctttccccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125214" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125513" g_stop="125636" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="224" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127121" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="419" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127122" i_stop="128297" i_length="1176">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="431" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="137305" i_length="8996">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="137306" g_stop="137374" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="500" r_length="69" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E734080" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E734080" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125513" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127121"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="137306" e_stop="137374"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATATGTTGATATCATTTTCTCAACTTTTATATTCGATTAGGAAAAGTAATTGAGAATTTAATCGATTATTTATTCGTGTATATACTATGTTGAGATCATTTTCTCAACTTGTATTTGAATAATGTAATGCAGTATTATGTATGTGTTAGTAAATTTAACGAATCGATCGAAATTATCATTAACTTCTAAACTAAATAAAATGAATGAAATGATTTTAGCCATTATATTATTAAACGATGAAAAACAAGTTGGTGCCAAAATTTAAAATAAAAATGAAAAAATCAAATATTATAACTTGTGGTCCAAGATGTTTCGAAGGTGATTGATATATTTATGTGAAATAGTACAACATCATGTCAATGTACTAATCAATATGTCAATTGATTTAATCATAATTTACAAAATAAATGACATTTTTTTGTATTCAATTATCAATTTAACTTTAGCTTCTCATTTTATTCATTAAATAAATTATAACCACATAAATTTTTCTTATAACTTTTCTTTCTTTAATTATTAAGATTTTTTCAAGTAGATCTCTTTAAATTACAAGTTTCAATATTTTTATTTAAAATTTTTATATTTAATTAAAAAACCTTCGGATAAATTGAGACGAAATGAGTAACAAAATATTTTTCTTAGACAAAATTATGACAAGTAGGACAATTGAGAACCATAGGATAAAATTGATGATTGTGTTCACAATTTATTACCAAATACCAATCACATGTCTCATGTGTGACTTGACATGTTTCATACGGCGTATTTTTATTATTTTTTCTTTTGTTTTCAAACTTAAAATACACAATTTTATCAGATATATCTATTATGATCATTATCTAAAAGGTTAATTTATTATCTTTTCATAATAATTTATTATCTCAATGTTATAGTAACGAAAAACATTGAGATAGTCGATATCGTTACAGTCACTCTACATATTTTAACTAATTAAACGTTAGAGTATAATATGAAATTACAAGAATTTAATTTAAAAAAATTGAGAAATCGAAGAATATAAGAATAATTTACATATCATTTTAAAAGCATGTTTTGTTGGTTGAATTATAATTGACAAATAAAAATGATATTCTTTTAAGGGAAAATTGTGTATAATAGCAAACTAATAACCTAAATTAAATGGAATAGCTAGGGTTTGATTTAATTTAATTGTGCTCCATAGCAAACATAAGCTAAAATTTGCCAGCGTCTCTCTCCCAAAAATCTCGCTCGCCACTCTCCATTCTCGCTCGCCTCTCTCGCTTTATACACAGAAGTGTATAATTCTGTTTTTGTTTTGTATAGAGCGAGAGAAAATTGTATATACAATTGCGAATTATACAATTGCAGTGAAATACAATTTTCTCTAGCTTTATACAACAGAAGTGTATACATTGTGTTCCTGTTTTTGTATAAAGCGAGAGAAACATATATCTTCTTGCTATACACTTATAATTAGGCAACATACATACATTTTAATTCAATTCAACTGTATGCAAAACAAATTATACAATTGCAGCGAAATAGGCCAGTGAATTATACAATTATATATGTATAGCAGATTATACAGTTTTATGTGTGCTATGGAGCGCAATTATGTAAAGTTTGTTATACCATACAAATATAAATTTTTCATTTGCTATATGTAAAAGTTGCACTTCTTTTAAAGACGGACTAGTAAGGTAATTTAATTTTTTTTTGTCTCTTATTTTGCAAAGAAAACAGGTCCTTTAATGGGCCAGGGACCGTTGGACTTGTGGATTTGAAGGAGTTTGCTGAGTGGGCTGATTAAGACTAGCCACGTGGGTTGTTGGAATACCTCTTGTCTTCTAGTGAACCCCATATGCCAAATTATTGTTGTCAACGTGGCCATCAATATGGGACCCACACATTTTATGCTACCATACCCCACCCCCCACCCCCACCACCCTACCCCATGTAGAAAAGCTACTATCATGCATCATCATCATGATACATAATGATGTTGGATGTGATATATGGGTATTTTCACGACGTAATATATAAACGTGTTCTTTCATTTCATCTCAGCTGGTATCTATGTCTTTTAACTTTGTGTGTAGACAAGTAAACATGCTTTTAAAGTAATAAGAAAAATTATTCTTATGTGGCAAAATACAAATCAGTTTGAGTGTATATCATCTTCGTGATACATGATGATGAAGATTGTGATACGTGGGTATTTTCACGATATTATATATAAACGTGTTTTTTAATTTCATCTCAACTGGTATCTATGTCTTTCAGCTTTGGATAGGTAAAATTAAATACTCAAACTTATGTTATATAATCTATGTAGCATAATTTCGAAATAATATAATGTATATCACGTAATGTATATAACTTTATATAAATTTTTAAATATTATTTTATACATAACTAAAATAAAAGAATATAGATATCAGTTAAAGTCGATGTATGATATAATTTCTTTTTATTTTTATTTTTTTGTATGGATTTAGAAGACTTGGAGATTGACCCACATTATCTTCTTTAAATTAGCTTTATTTTGTGGTTCAATCAAACTTGGTTGCTATATTGGTTGTCCCTTTTTGTATTTTTGTTCTTTTGTTCCATAGGAGTTGGATCTAACTAATACAAATCAATTTTTAACATAAATTATGCAATTATTTAAGGCTCAAATAAAATATTACCACTAAACTTTCTCTTTCGTAAAAGTCATTTCACCAAAAAGTTCTATATAATATTACCTTTTTTAACCCAAAAAAGGCAATTAGTGACCTTAAAAATTAAGTTTAATTCGGATTAGGAAATTGTCATCATCTTTTGGTAATTTATTATATAAAAATAATGGCTTAATGGTCAAAATTCATAACTTAAATGACACGTATCATAAAATATTTTTAGGCTTATATTATTATAATAATAATAATATTATGTTTCTTTCTCTTTCGTAGTAGTCATTTTACAAAAAAAGCTATATATTATATTTTTCTTTTTACCAAAAAGAGCAGTTAATAATAATTAATTTAGAAAAATGAAGACTTGTTTGCCAAACGATAAAAGTTCTTTTTAATCTTATTTGGATTATAAATCGTCACCTCCTAATTATTTTATTCTATAATACTTTTAGGATATGATTCAATATATTAAAAACCCATCACTTGAATAACACGTATCATCAATTATTTCAGGCACAAATGATAATAATATCTTTTTTTCTTTTTAGTGAAAGTCATTTTTACCTTAAAAAAAACAGTTATTAATCAAGAAAAAATATTAAAATTATTGCTTCCTTTTAAAACAATAAAATTGTTATAAATACACCGTATTGAATATATCAGTATTTACTAAATCAGCTTATAATTAAGTACGTAGTAAAATTACACAACTGAGTTCTAAAGAGGATAAATATTAAATAAATTTTATCATTGCTTTATGGAGATAGATAGACTACTTCGAAAGATTCTCTACTTACGTCCAACACCAACATACAAATTCTAAAAAGTGACTTTTGCAATCAAATAAGTAGCTTAAACAAACCGCATCTNNTCATTTTCGATAAATTTTGAGCTGTTATTAATAATATAACGTTCCTTATTTTATATTTAACAAAAAGTAAAATGAAAAAAAAATATATAAAAGTTGTAATATATAATGGACCAATCATAATACAACAGGTATATAATCAATTAAAAGAACATTTATGGGGTTCTCTTTTCTATAGTGCTCCATACTAAAAATTCCAATGTAACATATACATTATAACTATAAAGGTGATGTTGCAACTAATAAGAAAACATATCTAACAGAGGCAAATTCAGTATTTAAAGATTAATGAGACAGTTATTATTTTAATATATGTCTAAGCAAAACTTCTAATAATGATTAAGAAGTAATATCGTGTGATATGTGTTAAATATAAGTGCTATAATACGATTGAATTATGCATCACAGAAAATATCTTCAAACTATATACACAATATTTTTTGAAACAAATATACGTGCGCCCTCGCTTATATATATATGTTGGGAAATTTATTTTATTTTTTATTGAAAAAATTATTTTAAAAAAGAGAGTTTTATTCTTTTTGTTGAAGAAAATTAGTTGTAATTAACACACAGCAAAACTGAGCTGGAAGGTCAAAATTGCTTAGAAATAAATTAAGACAGGGTGGAAAAAAGAATATTTACCTAAAAAGAATGATTGAAGTGGTTTACATTACTCGATAAAGAATCTGATTATGTTCGAATCATATAATATAATAATAATAACAGGTGTAATATTTTTATTTATTTAATTATAATGTATAAGATTTGTATTATATACTCAATCATTGACAAGTTGAAAGTATTTAATTTTTCTTCTTCTCCACATAATAACACCAAACATATCATGAGGACTCCTGAAGATCCCCATAATATGCGGATCAAACATTTATATAATAAAATGAGATAAGACGCATAAAAAATTAAATAAAAATATAAGTTACTGTCATCAAAATATATTGTTACGATTACGATTATCACTATCAATTATCATTACAATAATCAACTGCACAATTAATATATCACTGAATCACTATAATTATTCACCATTAACATATTTATGTATCTATCACTATGAATAACCATTGTTAGTGACTAATATCAACCAACATTACCATTAATTACTATCGAACAGTTAACGTCAATCAATACTATTCTCAATCGACGTCTACGAATCATCAATATATTGTCATAGTTTTTTTAAAAAAATATGTATTTATACAAACATATAGTATCAAACTAATTTAGTATTTTATTTAAATATTATATTTATTATTATTATTAAATATATATTCAAACATGAAAAATAAATAATTCCAATTATTTAAATATAAATCTTAATAATCAGAGAATTTAAACATCTAAATCTCTATATGTATTTTAATTAAGTTAGAAGCTTAATCTTTAACAAACAAAACTAGGTCTTAAATAATCTTGAAGTTAAAGTATCATAATGGCCTCTATACGAAGCTTATTTATGTTAATTGCTAGTCACCTATATATAACGCAAAAAATAAGTCACCCTGCTATTTTTTTGGTTTTTAAGAAAATGATATACAATTTCTTTTAGTCAGTTTCGAAAAAAAAGATCTTTTTTTTTATAGCGATATTTTAATTTCAACTTTCATATGACATATATCTAAGATCACAATATTAAAAAATATTTTGATATATTTGACATAACTATAATTTAGAATCATTGAATCAAATTTTTTTTATTTTTTTTAAAAAATTTCATATCAAAACTCAATAATTCTATTTTAAACAAATGAAGTAAGCTTGCTAATTTTTTTAATACCAATTTGTCTAGCAGTTCATTGGCTTACATTTGCGTGACTGTATTGCCAATGGTTCTTTTTTTTTTTTTAAAGAAAAATAAAATACATAAGTAATCAGTATGAGTTTATGGGTTTTATTTATTTTATATTCTTGGTAGAGTATGTATGAGTTTATGATTCTTATCTATATATAAAAATATAATAATTTCCCATGGATTCTGCTTGATATTCGGAAAATAACTGATTAAACTATGAGATTTTTTCTATTTATATACTATATATATATATATATATATATATATATATATATGGAGTTAACATTTATAGGCATATGACAATTATTATAATTAAAGCCTTTAAATGTCTAGTGTTTCTATTAGGGCTGTGTATCGGTTGGTTCAGTTTGGTTTTAAAGTTTAACGGGTTGGCTTATTGATTATCGGTTTGTAGAGATGCTAAACCGTTATAGAACCATTAAGATATTGGCTTATCGGTTATTGATTTTTCGGTTTTTGATCTTTATCGGTTCGGTTATCGATTTAACCATTAAGATTTGACACAAAAGAAAAAACATTGAAAATCACTTAGAAACAAGGTGACAAACCAAATAAACCACGCACTTGAGTTCACAAGTTACATCTTGCTCAAAAGCAAACACTTTTACATTGTAGAATAATCAAGTGTTTGAGATAATAAAAAATAAAAGTAGGAAATTAAACTCCTAGTCGAGGACTTTATATGCAAAATGATATAAATATAATTATTTTAATTTACTATCGGGTTGTCAGTTAACCCATTAAGAAAAAACTTTAAACCGTTAAGAACCAATAACCCGATAACAAAAAAAATCAAAATTGTTATCAAAACCACTAATCCAATAACCCAATACTACAAATCAATAACTTTTTTATCGGTTCGGCTTATCGGTTTCGGTTCGATTTTGAACGGCCCTAGTTTAAACCGTTAAGAACCAATAACCCGATAACAAAAAAAATCAAAACTGTTATCAAAACCACTAATCCAATAACCCAATACTAGAAATCAATAACTTTTTTATCGGTTCGACTTATCGATTTCGGTTCGATTTTGAACGGCCCTAGTTTACATTGGTAGAGCTAAATTTTGTTTGAGGTAAGTTAAATTAATATCGATCAAAAAATTATACTATATATTATTTTTCAAAATATATATCAAAATTTCTTGATTTTTTCCTTGCGTTTTATTTTTTAAAGAAATGGAGGGAGACTAGTGCAAAGACATGCAAAATATTGTCCTAGAGAAAATGGATATAATCTCATGAAATATGAAGCTATGTGGATTAAAATGCTGAATAATCTTTATATATGAATAAAAAGAGAAATTATTAATTATTCTGTTTTCTTAATAAACAAATCCAAGTCTTATCTTAAACTAGACAGGATACAGTCACCATTAATTAAGTTGCTTACAATAGGGGCATCAGAAAAAAAAAGGGCAAAATTGTATATAATCACTCATTTTGATTAAATATATGTGGTTGAAATTTTTCATTCTCGTATACATTAATATATTCAGCGAAATTTTACAAATAAAGTCTGAAAGGTAAAATATATGTATCCCTTATTCATACAACGTAGAAATAAAAGAGACTATTTCTTAAAGATTCTTCGCGCAAATACAAAAATTAAACATTCTAATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</genome_strand>
        <mrna_strand>AGGGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCGGGGGGGGGGGCCGGACCCCCTTTCCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E303572" ref_strand="+" ref_description="SGN-E303572 [cLEY-6-A5]">
      <seq>tgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttaaaataaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125213" stop="144163"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125513" g_stop="125636" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="224" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127123" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="421" r_length="197" r_score="0.995"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127124" i_stop="128297" i_length="1174">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="433" r_length="12" r_score="0.750"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E303572" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E303572" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125513" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127123"/>
          <exon e_start="128298" e_stop="128309"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATA</genome_strand>
        <mrna_strand>TGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E351140" ref_strand="+" ref_description="SGN-E351140 [cTOS-6-N20]">
      <seq>tgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagattttcaagttcaacttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125213" stop="127472"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125513" g_stop="125636" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="224" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127179" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="477" r_length="253" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E351140" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351140" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125513" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127179"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATAT</genome_strand>
        <mrna_strand>TGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E356199" ref_strand="+" ref_description="SGN-E356199 [cTOS-20-D15]">
      <seq>tgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttcgaaccaaacagaggctgaatttgctttttatgaactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125213" stop="127453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125513" g_stop="125636" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="224" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127152" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="450" r_length="226" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E356199" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>450</cumulative_length_of_scored_exons>
        <coverage percentage="0.926" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356199" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125513" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127152"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAG</genome_strand>
        <mrna_strand>TGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E353876" ref_strand="+" ref_description="SGN-E353876 [cTOS-10-G3]">
      <seq>tgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125213" stop="127449"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125513" g_stop="125636" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="224" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127149" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="447" r_length="223" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E353876" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E353876" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125513" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127149"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTT</genome_strand>
        <mrna_strand>TGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E308609" ref_strand="+" ref_description="SGN-E308609 [cLEY-21-J19]">
      <seq>tgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125213" stop="127438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125513" g_stop="125636" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="224" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127144" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="442" r_length="218" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E308609" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>442</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E308609" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125513" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127144"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTA</genome_strand>
        <mrna_strand>TGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E309178" ref_strand="+" ref_description="SGN-E309178 [cLEZ-12-I7]">
      <seq>tgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125213" stop="127417"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125513" g_stop="125636" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="224" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127126" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="424" r_length="200" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E309178" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E309178" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125513" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127126"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATT</genome_strand>
        <mrna_strand>TGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343486" ref_strand="+" ref_description="SGN-E343486 [cTOF-19-I9]">
      <seq>tgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125213" stop="127424"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125513" g_stop="125636" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="224" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127121" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="419" r_length="195" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="420" polyA_stop="436"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E343486" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>419</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E343486" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125513" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127121"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTT</genome_strand>
        <mrna_strand>TGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E312605" ref_strand="+" ref_description="SGN-E312605 [cLEZ-20-D19]">
      <seq>tgagttctgcaaaagtatggttttcttgcaaacacatcgcgcagcctcggttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125213" stop="127417"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125513" g_stop="125636" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="224" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127116" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="414" r_length="190" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="415" polyA_stop="427"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E312605" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>414</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E312605" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125513" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127116"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAG</genome_strand>
        <mrna_strand>TGAGTTCTGCAAAAGTATGGTTTTCTTGCAAACACATCGCGCAGCCTCGGTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E345235" ref_strand="+" ref_description="SGN-E345235 [cTOF-13-G18]">
      <seq>tgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtnaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125213" stop="127381"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125513" g_stop="125636" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="224" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127077" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="375" r_length="151" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="379" polyA_stop="394"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E345235" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>375</cumulative_length_of_scored_exons>
        <coverage percentage="0.952" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E345235" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125513" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127077"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAA</genome_strand>
        <mrna_strand>TGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E238061" ref_strand="+" ref_description="SGN-E238061 [cLED-22-E19]">
      <seq>gagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125214" stop="127445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125514" g_stop="125636" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="223" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127154" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="451" r_length="228" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E238061" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>451</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E238061" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125514" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127154"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGAT</genome_strand>
        <mrna_strand>GAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E404481" ref_strand="+" ref_description="SGN-E404481 [PPC-14-M3]">
      <seq>aggttctgcaaaagtaaggtttcttacaaacacaccgcgcagcctcgcttttctgccttgtgaagatgggtcactctaacatctggaacgctcatccaaagaactacggccctggctctcgcacacgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatctctcatatgagcatctacggggacctctacatgtggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgtttaacttttggaagtgaactgctatgtggacctaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125214" stop="127398"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125514" g_stop="125636" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="127" r_length="127" r_score="0.854"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="227" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127098" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="395" r_length="168" r_score="0.895"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E404481" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>395</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E404481" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125514" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127098"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTC-----TGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAA</genome_strand>
        <mrna_strand>AGGTTCTGCAAAAGTAAGG-TTTCTTACAAACACACCGCGCAGCCTCGCTTTTCTGCCTTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCATCCAAAGAACTACGGCCCTGGCTCTCGCACACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTCTCATATGAGCATCTACGGGGACCTCTACATGTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTTAACTTTTGGAAGTGAACTGCTATGTGGACCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E390147" ref_strand="+" ref_description="SGN-E390147 [TUS-41-C19]">
      <seq>agttctgcaaaaatagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagattttcaagttcaacttaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125215" stop="153936"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125515" g_stop="125636" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="222" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127171" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="467" r_length="245" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127172" i_stop="128297" i_length="1126">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="468" r_stop="479" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="129506" i_length="1197">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="129507" g_stop="129512" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="480" r_stop="485" r_length="6" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E390147" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>485</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E390147" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125515" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127171"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="129507" e_stop="129512"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAA</genome_strand>
        <mrna_strand>AGTTCTGCAAAAATAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E390146" ref_strand="+" ref_description="SGN-E390146 [TUS-41-C19](-)">
      <seq>agttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagattttcaagttcaacttaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125215" stop="153936"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125515" g_stop="125636" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="222" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127171" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="467" r_length="245" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127172" i_stop="128297" i_length="1126">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="468" r_stop="479" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="129506" i_length="1197">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="129507" g_stop="129512" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="480" r_stop="485" r_length="6" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E390146" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>485</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E390146" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125515" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127171"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="129507" e_stop="129512"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAA</genome_strand>
        <mrna_strand>AGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E396458" ref_strand="+" ref_description="SGN-E396458 [TUS-48-D19](-)">
      <seq>agttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagattttcaagttcaacttaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125215" stop="153936"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125515" g_stop="125636" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="222" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127171" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="467" r_length="245" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127172" i_stop="128297" i_length="1126">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="468" r_stop="479" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="129506" i_length="1197">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="129507" g_stop="129512" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="480" r_stop="485" r_length="6" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E396458" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>485</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E396458" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125515" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127171"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="129507" e_stop="129512"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAA</genome_strand>
        <mrna_strand>AGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E391205" ref_strand="+" ref_description="SGN-E391205 [TUS-48-D19]">
      <seq>agttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaaaaaagactagcttttaggattggaggattttgttctatacattcctaatttttagattttcaagttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125215" stop="127464"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125515" g_stop="125636" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="222" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127164" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="461" r_length="239" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E391205" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>460</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E391205" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125515" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127164"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTA-TATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTC</genome_strand>
        <mrna_strand>AGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAAAAAGACTAGCTTTTAGGATTGGAGGATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E346989" ref_strand="+" ref_description="SGN-E346989 [cTOF-25-O3]">
      <seq>agttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125215" stop="127424"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125515" g_stop="125636" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="222" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127121" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="417" r_length="195" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="418" polyA_stop="428"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E346989" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E346989" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125515" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127121"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTT</genome_strand>
        <mrna_strand>AGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E235740" ref_strand="+" ref_description="SGN-E235740 [cLED-15-N22]">
      <seq>gttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagattttcaagttcaacttaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125216" stop="153936"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125516" g_stop="125636" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="221" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127171" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="466" r_length="245" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127172" i_stop="128297" i_length="1126">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="478" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="129506" i_length="1197">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="129507" g_stop="129512" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="479" r_stop="484" r_length="6" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E235740" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E235740" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125516" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127171"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="129507" e_stop="129512"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAA</genome_strand>
        <mrna_strand>GTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E558083" ref_strand="+" ref_description="SGN-E558083 [16983]">
      <seq>gttctgcagaagtagggttttcttacaaacacatcgcgcagcctcgcttttctgccttggtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcggcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatcttcaatatgagcttctacgaggacctctacatttggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttcaacttttggaagtgaactgctatgtggacctaagaaagactagctttttaaatttaatattttgttctataaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125216" stop="127438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125516" g_stop="125636" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="128" r_length="128" r_score="0.868"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="228" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127137" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="435" r_length="207" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="436" polyA_stop="446"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E558083" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>432</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E558083" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125516" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127137"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGC-TTT-T--C-T-GTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTC-GCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATAC</genome_strand>
        <mrna_strand>GTTCTGCAGAAGTAGGGTTTTCTTACAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTTCAATATGAGCTTCTACGAGGACCTCTACATTTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTCAACTTTTGGAAGTGAACTGCTATGTGGACCTAAGAAAGACTAGCTTTTTAAATTTAATATTTTGTTCTATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E715472" ref_strand="+" ref_description="SGN-E715472 [FB14BE07]">
      <seq>gttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125216" stop="127438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125516" g_stop="125636" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="221" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127137" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="432" r_length="211" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="433" polyA_stop="443"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E715472" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>432</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E715472" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125516" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127137"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATAC</genome_strand>
        <mrna_strand>GTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E568562" ref_strand="+" ref_description="SGN-E568562 [12864]">
      <seq>gttctgcaaaagtagggtttcttacaaacacatcgcgcagcctcgcttttctgccttggtgaagatgggtcactctaacatctggaacgctcatccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatctctcatatgagcatctacggggacctctacatgtggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgtttaacttttggaagtgaactggtatgtggacctaagaaagactagcttttcttaaatttcactcatttgtgttctataacaaaaaaaaaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125216" stop="127413"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125516" g_stop="125636" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="126" r_length="126" r_score="0.876"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="226" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127113" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="409" r_length="183" r_score="0.898"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="440" polyA_stop="453"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E568562" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>408</cumulative_length_of_scored_exons>
        <coverage percentage="0.901" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E568562" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125516" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127113"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGC-TTT-T--C-TG-TGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGCTTTT</genome_strand>
        <mrna_strand>GTTCTGCAAAAGTAGGG-TTTCTTACAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGGTGAAGATGGGTCACTCTAACATCTGGAACGCTCATCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTCTCATATGAGCATCTACGGGGACCTCTACATGTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTTAACTTTTGGAAGTGAACTGGTATGTGGACCTAAGAAAGACTAGCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E277756" ref_strand="-" ref_description="SGN-E277756 [cLEL-5-F15](-)">
      <seq>tcgaggcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacattgggtgctggtagaagacatatggcattagagctttatgatttgcatctcccttcagttaaatgatgtaatgggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125221" stop="127348"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125516" g_stop="125636" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="221" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127048" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="343" r_length="122" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E277756" ref_strand="-">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>343</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E277756" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="125516" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127048"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGAT</genome_strand>
        <mrna_strand>TCGAGGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTGGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTATGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E253853" ref_strand="+" ref_description="SGN-E253853 [cLEG-28-B20]">
      <seq>ttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttaaaaaaaaaaaaaaaaaaaaactcgagactagcaaacatgggctacttgacatcttcttttgttctcttcttccttctttgtgtgacttatacttatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125217" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125517" g_stop="125636" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="120" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="121" r_stop="220" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127151" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="445" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127152" i_stop="128297" i_length="1146">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="446" r_stop="457" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="136212" i_length="7903">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.244" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="136213" g_stop="136219" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="464" r_length="7" r_score="0.714"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="136220" i_stop="137305" i_length="1086">
            <donor d_prob="0.377" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="137306" g_stop="137384" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="543" r_length="79" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E253853" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E253853" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125517" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127151"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="136213" e_stop="136219"/>
          <exon e_start="137306" e_stop="137384"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATATGTTGATATCATTTTCTCAACTTTTATATTCGATTAGGAAAAGTAATTGAGAATTTAATCGATTATTTATTCGTGTATATACTATGTTGAGATCATTTTCTCAACTTGTATTTGAATAATGTAATGCAGTATTATGTATGTGTTAGTAAATTTAACGAATCGATCGAAATTATCATTAACTTCTAAACTAAATAAAATGAATGAAATGATTTTAGCCATTATATTATTAAACGATGAAAAACAAGTTGGTGCCAAAATTTAAAATAAAAATGAAAAAATCAAATATTATAACTTGTGGTCCAAGATGTTTCGAAGGTGATTGATATATTTATGTGAAATAGTACAACATCATGTCAATGTACTAATCAATATGTCAATTGATTTAATCATAATTTACAAAATAAATGACATTTTTTTGTATTCAATTATCAATTTAACTTTAGCTTCTCATTTTATTCATTAAATAAATTATAACCACATAAATTTTTCTTATAACTTTTCTTTCTTTAATTATTAAGATTTTTTCAAGTAGATCTCTTTAAATTACAAGTTTCAATATTTTTATTTAAAATTTTTATATTTAATTAAAAAACCTTCGGATAAATTGAGACGAAATGAGTAACAAAATATTTTTCTTAGACAAAATTATGACAAGTAGGACAATTGAGAACCATAGGATAAAATTGATGATTGTGTTCACAATTTATTACCAAATACCAATCACATGTCTCATGTGTGACTTGACATGTTTCATACGGCGTATTTTTATTATTTTTTCTTTTGTTTTCAAACTTAAAATACACAATTTTATCAGATATATCTATTATGATCATTATCTAAAAGGTTAATTTATTATCTTTTCATAATAATTTATTATCTCAATGTTATAGTAACGAAAAACATTGAGATAGTCGATATCGTTACAGTCACTCTACATATTTTAACTAATTAAACGTTAGAGTATAATATGAAATTACAAGAATTTAATTTAAAAAAATTGAGAAATCGAAGAATATAAGAATAATTTACATATCATTTTAAAAGCATGTTTTGTTGGTTGAATTATAATTGACAAATAAAAATGATATTCTTTTAAGGGAAAATTGTGTATAATAGCAAACTAATAACCTAAATTAAATGGAATAGCTAGGGTTTGATTTAATTTAATTGTGCTCCATAGCAAACATAAGCTAAAATTTGCCAGCGTCTCTCTCCCAAAAATCTCGCTCGCCACTCTCCATTCTCGCTCGCCTCTCTCGCTTTATACACAGAAGTGTATAATTCTGTTTTTGTTTTGTATAGAGCGAGAGAAAATTGTATATACAATTGCGAATTATACAATTGCAGTGAAATACAATTTTCTCTAGCTTTATACAACAGAAGTGTATACATTGTGTTCCTGTTTTTGTATAAAGCGAGAGAAACATATATCTTCTTGCTATACACTTATAATTAGGCAACATACATACATTTTAATTCAATTCAACTGTATGCAAAACAAATTATACAATTGCAGCGAAATAGGCCAGTGAATTATACAATTATATATGTATAGCAGATTATACAGTTTTATGTGTGCTATGGAGCGCAATTATGTAAAGTTTGTTATACCATACAAATATAAATTTTTCATTTGCTATATGTAAAAGTTGCACTTCTTTTAAAGACGGACTAGTAAGGTAATTTAATTTTTTTTTGTCTCTTATTTTGCAAAGAAAACAGGTCCTTTAATGGGCCAGGGACCGTTGGACTTGTGGATTTGAAGGAGTTTGCTGAGTGGGCTGATTAAGACTAGCCACGTGGGTTGTTGGAATACCTCTTGTCTTCTAGTGAACCCCATATGCCAAATTATTGTTGTCAACGTGGCCATCAATATGGGACCCACACATTTTATGCTACCATACCCCACCCCCCACCCCCACCACCCTACCCCATGTAGAAAAGCTACTATCATGCATCATCATCATGATACATAATGATGTTGGATGTGATATATGGGTATTTTCACGACGTAATATATAAACGTGTTCTTTCATTTCATCTCAGCTGGTATCTATGTCTTTTAACTTTGTGTGTAGACAAGTAAACATGCTTTTAAAGTAATAAGAAAAATTATTCTTATGTGGCAAAATACAAATCAGTTTGAGTGTATATCATCTTCGTGATACATGATGATGAAGATTGTGATACGTGGGTATTTTCACGATATTATATATAAACGTGTTTTTTAATTTCATCTCAACTGGTATCTATGTCTTTCAGCTTTGGATAGGTAAAATTAAATACTCAAACTTATGTTATATAATCTATGTAGCATAATTTCGAAATAATATAATGTATATCACGTAATGTATATAACTTTATATAAATTTTTAAATATTATTTTATACATAACTAAAATAAAAGAATATAGATATCAGTTAAAGTCGATGTATGATATAATTTCTTTTTATTTTTATTTTTTTGTATGGATTTAGAAGACTTGGAGATTGACCCACATTATCTTCTTTAAATTAGCTTTATTTTGTGGTTCAATCAAACTTGGTTGCTATATTGGTTGTCCCTTTTTGTATTTTTGTTCTTTTGTTCCATAGGAGTTGGATCTAACTAATACAAATCAATTTTTAACATAAATTATGCAATTATTTAAGGCTCAAATAAAATATTACCACTAAACTTTCTCTTTCGTAAAAGTCATTTCACCAAAAAGTTCTATATAATATTACCTTTTTTAACCCAAAAAAGGCAATTAGTGACCTTAAAAATTAAGTTTAATTCGGATTAGGAAATTGTCATCATCTTTTGGTAATTTATTATATAAAAATAATGGCTTAATGGTCAAAATTCATAACTTAAATGACACGTATCATAAAATATTTTTAGGCTTATATTATTATAATAATAATAATATTATGTTTCTTTCTCTTTCGTAGTAGTCATTTTACAAAAAAAGCTATATATTATATTTTTCTTTTTACCAAAAAGAGCAGTTAATAATAATTAATTTAGAAAAATGAAGACTTGTTTGCCAAACGATAAAAGTTCTTTTTAATCTTATTTGGATTATAAATCGTCACCTCCTAATTATTTTATTCTATAATACTTTTAGGATATGATTCAATATATTAAAAACCCATCACTTGAATAACACGTATCATCAATTATTTCAGGCACAAATGATAATAATATCTTTTTTTCTTTTTAGTGAAAGTCATTTTTACCTTAAAAAAAACAGTTATTAATCAAGAAAAAATATTAAAATTATTGCTTCCTTTTAAAACAATAAAATTGTTATAAATACACCGTATTGAATATATCAGTATTTACTAAATCAGCTTATAATTAAGTACGTAGTAAAATTACACAACTGAGTTCTAAAGAGGATAAATATTAAATAAATTTTATCATTGCTTTATGGAGATAGATAGACTACTTCGAAAGATTCTCTACTTACGTCCAACACCAACATACAAATTCTAAAAAGTGACTTTTGCAATCAAATAAGTAGCTTAAACAAACCGCATCTNNTCATTTTCGATAAATTTTGAGCTGTTATTAATAATATAACGTTCCTTATTTTATATTTAACAAAAAGTAAAATGAAAAAAAAATATATAAAAGTTGTAATATATAATGGACCAATCATAATACAACAGGTATATAATCAATTAAAAGAACATTTATGGGGTTCTCTTTTCTATAGTGCTCCATACTAAAAATTCCAATGTAACATATACATTATAACTATAAAGGTGATGTTGCAACTAATAAGAAAACATATCTAACAGAGGCAAATTCAGTATTTAAAGATTAATGAGACAGTTATTATTTTAATATATGTCTAAGCAAAACTTCTAATAATGATTAAGAAGTAATATCGTGTGATATGTGTTAAATATAAGTGCTATAATACGATTGAATTATGCATCACAGAAAATATCTTCAAACTATATACACAATATTTTTTGAAACAAATATACGTGCGCCCTCGCTTATATATATATGTTGGGAAATTTATTTTATTTTTTATTGAAAAAATTATTTTAAAAAAGAGAGTTTTATTCTTTTTGTTGAAGAAAATTAGTTGTAATTAACACACAGCAAAACTGAGCTGGAAGGTCAAAATTGCTTAGAAATAAATTAAGACAGGGTGGAAAAAAGAATATTTACCTAAAAAGAATGATTGAAGTGGTTTACATTACTCGATAAAGAATCTGATTATGTTCGAATCATATAATATAATAATAATAACAGGTGTAATATTTTTATTTATTTAATTATAATGTATAAGATTTGTATTATATACTCAATCATTGACAAGTTGAAAGTATTTAATTTTTCTTCTTCTCCACATAATAACACCAAACATATCATGAGGACTCCTGAAGATCCCCATAATATGCGGATCAAACATTTATATAATAAAATGAGATAAGACGCATAAAAAATTAAATAAAAATATAAGTTACTGTCATCAAAATATATTGTTACGATTACGATTATCACTATCAATTATCATTACAATAATCAACTGCACAATTAATATATCACTGAATCACTATAATTATTCACCATTAACATATTTATGTATCTATCACTATGAATAACCATTGTTAGTGACTAATATCAACCAACATTACCATTAATTACTATCGAACAGTTAACGTCAATCAATACTATTCTCAATCGACGTCTACGAATCATCAATATATTGTCATAGTTTTTTTAAAAAAATATGTATTTATACAAACATATAGTATCAAACTAATTTAGTATTTTATTTAAATATTATATTTATTATTATTATTAAATATATATTCAAACATGAAAAATAAATAATTCCAATTATTTAAATATAAATCTTAATAATCAGAGAATTTAAACATCTAAATCTCTATATGTATTTTAATTAAGTTAGAAGCTTAATCTTTAACAAACAAAACTAGGTCTTAAATAATCTTGAAGTTAAAGTATCATAATGGCCTCTATACGAAGCTTATTTATGTTAATTGCTAGTCACCTATATATAACGCAAAAAATAAGTCACCCTGCTATTTTTTTGGTTTTTAAGAAAATGATATACAATTTCTTTTAGTCAGTTTCGAAAAAAAAGATCTTTTTTTTTATAGCGATATTTTAATTTCAACTTTCATATGACATATATCTAAGATCACAATATTAAAAAATATTTTGATATATTTGACATAACTATAATTTAGAATCATTGAATCAAATTTTTTTTATTTTTTTTAAAAAATTTCATATCAAAACTCAATAATTCTATTTTAAACAAATGAAGTAAGCTTGCTAATTTTTTTAATACCAATTTGTCTAGCAGTTCATTGGCTTACATTTGCGTGACTGTATTGCCAATGGTTCTTTTTTTTTTTTTAAAGAAAAATAAAATACATAAGTAATCAGTATGAGTTTATGGGTTTTATTTATTTTATATTCTTGGTAGAGTATGTATGAGTTTATGATTCTTATCTATATATAAAAATATAATAATTTCCCATGGATTCTGCTTGATATTCGGAAAATAACTGATTAAACTATGAGATTTTTTCTATTTATATACTATATATATATATATATATATATATATATATATATGGAGTTAACATTTATAGGCATATGACAATTATTATAATTAAAGCCTTTAAATGTCTAGTGTTTCTATTAGGGCTGTGTATCGGTTGGTTCAGTTTGGTTTTAAAGTTTAACGGGTTGGCTTATTGATTATCGGTTTGTAGAGATGCTAAACCGTTATAGAACCATTAAGATATTGGCTTATCGGTTATTGATTTTTCGGTTTTTGATCTTTATCGGTTCGGTTATCGATTTAACCATTAAGATTTGACACAAAAGAAAAAACATTGAAAATCACTTAGAAACAAGGTGACAAACCAAATAAACCACGCACTTGAGTTCACAAGTTACATCTTGCTCAAAAGCAAACACTTTTACATTGTAGAATAATCAAGTGTTTGAGATAATAAAAAATAAAAGTAGGAAATTAAACTCCTAGTCGAGGACTTTATATGCAAAATGATATAAATATAATTATTTTAATTTACTATCGGGTTGTCAGTTAACCCATTAAGAAAAAACTTTAAACCGTTAAGAACCAATAACCCGATAACAAAAAAAATCAAAATTGTTATCAAAACCACTAATCCAATAACCCAATACTACAAATCAATAACTTTTTTATCGGTTCGGCTTATCGGTTTCGGTTCGATTTTGAACGGCCCTAGTTTAAACCGTTAAGAACCAATAACCCGATAACAAAAAAAATCAAAACTGTTATCAAAACCACTAATCCAATAACCCAATACTAGAAATCAATAACTTTTTTATCGGTTCGACTTATCGATTTCGGTTCGATTTTGAACGGCCCTAGTTTACATTGGTAGAGCTAAATTTTGTTTGAGGTAAGTTAAATTAATATCGATCAAAAAATTATACTATATATTATTTTTCAAAATATATATCAAAATTTCTTGATTTTTTCCTTGCGTTTTATTTTTTAAAGAAATGGAGGGAGACTAGTGCAAAGACATGCAAAATATTGTCCTAGAGAAAATGGATATAATCTCATGAAATATGAAGCTATGTGGATTAAAATGCTGAATAATCTTTATATATGAATAAAAAGAGAAATTATTAATTATTCTGTTTTCTTAATAAACAAATCCAAGTCTTATCTTAAACTAGACAGGATACAGTCACCATTAATTAAGTTGCTTACAATAGGGGCATCAGAAAAAAAAAGGGCAAAATTGTATATAATCACTCATTTTGATTAAATATATGTGGTTGAAATTTTTCATTCTCGTATACATTAATATATTCAGCGAAATTTTACAAATAAAGTCTGAAAGGTAAAATATATGTATCCCTTATTCATACAACGTAGAAATAAAAGAGACTATTTCTTAAAGATTCTTCGCGCAAATACAAAAATTAAACATTCTAATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</genome_strand>
        <mrna_strand>TTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGAGACTAGCAAACATGGGCTACTTGACATCTTCTTTTGTTCTCTTCTTCCTTCTTTGTGTGACTTATACTTATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E256526" ref_strand="+" ref_description="SGN-E256526 [cLEG-38-I1]">
      <seq>ttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttaaaaaaaaaaaaaaaaaaaaaactcgagactagcaaacatgggctacttgacatcttctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125217" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125517" g_stop="125636" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="120" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="121" r_stop="220" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127150" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="444" r_length="224" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127151" i_stop="128297" i_length="1147">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="445" r_stop="456" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="131211" i_length="2902">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.738" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="131212" g_stop="131235" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="477" r_length="21" r_score="0.625"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="131236" i_stop="131501" i_length="266">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.232" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="131502" g_stop="131531" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="478" r_stop="504" r_length="27" r_score="0.667"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E256526" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>510</cumulative_length_of_scored_exons>
        <coverage percentage="1.012" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E256526" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125517" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127150"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="131212" e_stop="131235"/>
          <exon e_start="131502" e_stop="131531"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATATGTTGATATCATTTTCTCAACTTTTATATTCGATTAGGAAAAGTAATTGAGAATTTAATCGATTATTTATTCGTGTATATACTATGTTGAGATCATTTTCTCAACTTGTATTTGAATAATGTAATGCAGTATTATGTATGTGTTAGTAAATTTAACGAATCGATCGAAATTATCATTAACTTCTAAACTAAATAAAATGAATGAAATGATTTTAGCCATTATATTATTAAACGATGAAAAACAAGTTGGTGCCAAAATTTAAAATAAAAATGAAAAAATCAAATATTATAACTTGTGGTCCAAGATGTTTCGAAGGTGATTGATATATTTATGTGAAATAGTACAACATCATGTCAATGTACTAATCAATATGTCAATTGATTTAATCATAATTTACAAAATAAATGACATTTTTTTGTATTCAATTATCAATTTAACTTTAGCTTCTCATTTTATTCATTAAATAAATTATAACCACATAAATTTTTCTTATAACTTTTCTTTCTTTAATTATTAAGATTTTTTCAAGTAGATCTCTTTAAATTACAAGTTTCAATATTTTTATTTAAAATTTTTATATTTAATTAAAAAACCTTCGGATAAATTGAGACGAAATGAGTAACAAAATATTTTTCTTAGACAAAATTATGACAAGTAGGACAATTGAGAACCATAGGATAAAATTGATGATTGTGTTCACAATTTATTACCAAATACCAATCACATGTCTCATGTGTGACTTGACATGTTTCATACGGCGTATTTTTATTATTTTTTCTTTTGTTTTCAAACTTAAAATACACAATTTTATCAGATATATCTATTATGATCATTATCTAAAAGGTTAATTTATTATCTTTTCATAATAATTTATTATCTCAATGTTATAGTAACGAAAAACATTGAGATAGTCGATATCGTTACAGTCACTCTACATATTTTAACTAATTAAACGTTAGAGTATAATATGAAATTACAAGAATTTAATTTAAAAAAATTGAGAAATCGAAGAATATAAGAATAATTTACATATCATTTTAAAAGCATGTTTTGTTGGTTGAATTATAATTGACAAATAAAAATGATATTCTTTTAAGGGAAAATTGTGTATAATAGCAAACTAATAACCTAAATTAAATGGAATAGCTAGGGTTTGATTTAATTTAATTGTGCTCCATAGCAAACATAAGCTAAAATTTGCCAGCGTCTC</genome_strand>
        <mrna_strand>TTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAC-TCGAG--ACTAG..........................................................................................................................................................................................................................................................................CAAACATGGGCT---ACTTGACATCTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E357574" ref_strand="+" ref_description="SGN-E357574 [cTOS-23-J6]">
      <seq>ttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataatttttgattatgttttaaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaaagaaatttatatttgttctatacattcctaaaattttagattttcaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125217" stop="127460"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125517" g_stop="125636" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="120" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="121" r_stop="220" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127167" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="464" r_length="244" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E357574" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357574" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125517" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127167"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTT-AACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTT-AAG-ATTTTATATTTTGTTCTATACATTCCT-AATTTTTAGATTTTCAAGTTCAAC</genome_strand>
        <mrna_strand>TTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTTGATTATGTTTTAAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAAGAAATTTATA-TTTGTTCTATACATTCCTAAAATTTTAGATTTTCAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E312660" ref_strand="+" ref_description="SGN-E312660 [cLEZ-20-J8]">
      <seq>ttctgcaaaagtagggttttcttgcaaacaccatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccgaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125217" stop="127453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125517" g_stop="125636" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="221" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127161" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="456" r_length="235" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E312660" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>455</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E312660" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125517" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127161"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTGCAAAAGTAGGGTTTTCTTGCAAACA-CATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAG</genome_strand>
        <mrna_strand>TTCTGCAAAAGTAGGGTTTTCTTGCAAACACCATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCGAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E449519" ref_strand="+" ref_description="SGN-E449519 [cSTS-6-B12]">
      <seq>ttctgcaaaagtagggtttcttacaaacacatcgcgcagcctcgcttttctgccttgtgaagatgggtcactctaacatctggaacgctcatccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatctctcatatgagcatctacggggacctctacatgtggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgtttaacttttggaagtgaactgctatgtggacctaagaaagactagcttttttaaatttaatattttgttctatacattcctaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125217" stop="127445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125517" g_stop="125636" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="0.892"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="224" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127144" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="439" r_length="215" r_score="0.894"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="440" polyA_stop="450"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E449519" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>438</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E449519" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125517" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127144"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGC-TTT-T--C-TGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGC-TTTTAAGATTTTATATTTTGTTCTATACATTCCTA</genome_strand>
        <mrna_strand>TTCTGCAAAAGTAGGGT-TTCTTACAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCATCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTCTCATATGAGCATCTACGGGGACCTCTACATGTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTTAACTTTTGGAAGTGAACTGCTATGTGGACCTAAGAAAGACTAGCTTTTTTAAATTTAATATTTTGTTCTATACATTCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E269886" ref_strand="+" ref_description="SGN-E269886 [cLEM-17-D12]">
      <seq>ttctgcaaaagtattgttttctttttaacacatcgcgcaacctggggtttctgggaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcatacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggagctggtagaagacatatggcattagagctttctgatttgcatctcccttcagttaaatgatgtaatgggataattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125243" stop="127353"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125517" g_stop="125636" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="120" r_length="120" r_score="0.917"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="121" r_stop="220" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127053" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="347" r_length="127" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E269886" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>347</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E269886" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125517" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127053"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTT</genome_strand>
        <mrna_strand>TTCTGCAAAAGTATTGTTTTCTTTTTAACACATCGCGCAACCTGGGGTTTCTGGGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCATACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGAGCTGGTAGAAGACATATGGCATTAGAGCTTTCTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E610994" ref_strand="+" ref_description="SGN-E610994 [60738]">
      <seq>tatgcaaaagtagggtttcttacaaacacatcgcgcagcctcgcttttctgccttgtgaagatgggtcactctaacatctggaacgctcatccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatctctcatatgagcatctacggggacctctacatgtggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgtttaacttttggaagtgaactgctatgtggacctaagaaagactagcttttttaaatttaatattttgttctataaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125218" stop="127413"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125518" g_stop="125636" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.882"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="223" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127137" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="431" r_length="208" r_score="0.886"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="432" polyA_stop="443"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E610994" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>430</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E610994" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125518" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127137"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGC-TTT-T--CT-GTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGC-TTTTAAGATTTTATATTTTGTTCTATAC</genome_strand>
        <mrna_strand>TATGCAAAAGTAGGG-TTTCTTACAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCATCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTCTCATATGAGCATCTACGGGGACCTCTACATGTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTTAACTTTTGGAAGTGAACTGCTATGTGGACCTAAGAAAGACTAGCTTTTTTAAATTTAATATTTTGTTCTATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E696029" ref_strand="+" ref_description="SGN-E696029 [LH_Ea08B03](-)">
      <seq>ctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgccttgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaatcttgaatatgagtttctacgaggacctctacatttggtactggtagagacatatggcattagagccttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtactagcttttaagattttatattttgttctatacattcctaatttttagattttcaaggttcaacttacattgatatttctctgtatgtctgaataacgatcagtccctgccaatacatgagatttcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125219" stop="127533"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125519" g_stop="125636" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.915"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="223" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127237" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="509" r_length="286" r_score="0.881"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E696029" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.021" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E696029" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125519" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127237"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGC-TTT-T--C-TGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAA-GTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAG</genome_strand>
        <mrna_strand>CTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTT-AAAATCTTGAATATGAGTTTCTACGAGGACCTCTACATTTGGTACTGGTAG-AGACATATGGCATTAGAGCCTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-A---CTA---G---CT---------T-----TTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATAACGATCAGTCCCTGCCAATACATGAGATTTCAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E596873" ref_strand="+" ref_description="SGN-E596873 [40364]">
      <seq>ctgcaaaagtagggtttcttacaaacacatcgcgcagcctcgcttttctgccttggtgaagatgggtcactctaacatctggaacgctcatccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatctctcatatgagcatctacggggacctctacatgtggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgtttaacttttggaagtgaactgctatgtggacctaagaaagactagcttttttaaatttaatattttgttctatacaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125219" stop="127438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125519" g_stop="125636" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.873"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="223" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127137" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="431" r_length="208" r_score="0.891"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="432" polyA_stop="443"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E596873" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E596873" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125519" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127137"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGC-TTT-T--C-TG-TGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGC-TTTTAAGATTTTATATTTTGTTCTATAC</genome_strand>
        <mrna_strand>CTGCAAAAGTAGGGTTT-CTTACAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGGTGAAGATGGGTCACTCTAACATCTGGAACGCTCATCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTCTCATATGAGCATCTACGGGGACCTCTACATGTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTTAACTTTTGGAAGTGAACTGCTATGTGGACCTAAGAAAGACTAGCTTTTTTAAATTTAATATTTTGTTCTATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E622990" ref_strand="+" ref_description="SGN-E622990 [73363]">
      <seq>tggcaaaagtagggtttcttacaaacacatcgcgcagcctcgcttttctgccttgtgaagatgggtcactctaacatctggaacgctcatccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatctctcatatgagcatctacggggacctctacatgtggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgtttaacttttggaagtgaactgctatgtggacctaagaaagactagcttttttaaatttaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125221" stop="127413"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125519" g_stop="125636" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="0.873"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="222" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127122" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="414" r_length="192" r_score="0.888"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E622990" ref_strand="+">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>414</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E622990" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125519" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127122"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTT----CT-GTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTA</genome_strand>
        <mrna_strand>TGGCAAAAGTAGGG-TTTCTTACAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCATCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTCTCATATGAGCATCTACGGGGACCTCTACATGTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTTAACTTTTGGAAGTGAACTGCTATGTGGACCTAAGAAAGACTAGCTTTTTTAAATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E226634" ref_strand="+" ref_description="SGN-E226634 [cLEL-26-P24](-)">
      <seq>ggcacgaggtagggttttcttgcaaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatatggaacgctcacccaaagaaatacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125225" stop="153936"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125520" g_stop="125636" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="0.923"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="219" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127081" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="374" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127082" i_stop="128297" i_length="1216">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="386" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="129506" i_length="1197">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="129507" g_stop="129512" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="392" r_length="6" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E226634" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>390</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E226634" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125520" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127081"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="129507" e_stop="129512"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCA-AAAGTAGGGTTTTCTTGC-AAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAA</genome_strand>
        <mrna_strand>GGCACGAGGTAGGGTTTTCTTGCAAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATATGGAACGCTCACCCAAAGAAATACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E540660" ref_strand="+" ref_description="SGN-E540660 [TUS-61-A21](-)">
      <seq>tgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagattttcaagttcaacttaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125220" stop="127472"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125520" g_stop="125636" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="117" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="217" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127181" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="472" r_length="255" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E540660" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E540660" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125520" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127181"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTT</genome_strand>
        <mrna_strand>TGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E540663" ref_strand="+" ref_description="SGN-E540663 [TUS-61-A21]">
      <seq>tgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagattttcaagttcaacttaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125220" stop="127472"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125520" g_stop="125636" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="117" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="217" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127181" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="472" r_length="255" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E540663" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E540663" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125520" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127181"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTT</genome_strand>
        <mrna_strand>TGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E716202" ref_strand="+" ref_description="SGN-E716202 [FB16BF03]">
      <seq>tgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125220" stop="127453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125520" g_stop="125636" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="117" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="217" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127152" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="443" r_length="226" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="444" polyA_stop="459"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E716202" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>443</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E716202" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125520" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127152"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAG</genome_strand>
        <mrna_strand>TGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E308793" ref_strand="+" ref_description="SGN-E308793 [cLEZ-14-J13]">
      <seq>gcaaaagtagggttttcttgcggacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctataaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125221" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125521" g_stop="125636" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="216" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127133" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="423" r_length="207" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127134" i_stop="130300" i_length="3167">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="130301" g_stop="130321" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="444" r_length="21" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E308793" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>444</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E308793" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125521" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127133"/>
          <exon e_start="130301" e_stop="130321"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATA</genome_strand>
        <mrna_strand>GCAAAAGTAGGGTTTTCTTGCGGACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E732387" ref_strand="+" ref_description="SGN-E732387 [LB02AB05]">
      <seq>gcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125221" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125521" g_stop="125636" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="216" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127136" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="426" r_length="210" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127137" i_stop="128297" i_length="1161">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="438" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="130300" i_length="1991">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="130301" g_stop="130321" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="459" r_length="21" r_score="0.857"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E732387" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E732387" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125521" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127136"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="130301" e_stop="130321"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATA</genome_strand>
        <mrna_strand>GCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCAAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E290251" ref_strand="+" ref_description="SGN-E290251 [cLET-5-F23]">
      <seq>gcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattctgatttatgttttaactgttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattgtgctctatacattcctaattcttagattctcaagttcaacttaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125221" stop="127472"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125521" g_stop="125636" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="216" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127181" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="471" r_length="255" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E290251" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E290251" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125521" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127181"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTT</genome_strand>
        <mrna_strand>GCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTCTGATTTATGTTTTAACTGTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTGTGCTCTATACATTCCTAATTCTTAGATTCTCAAGTTCAACTTAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E744792" ref_strand="+" ref_description="SGN-E744792 [GI|3687405]">
      <seq>gcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaaagacatatggcattagagctttttgatttgcatctcccttcagttaaatatgtatgggatattttgatttatgttttaacttttggaagtaactgctatgtgaacctagaaagactagcttttaagattttatattttgttctatacattcctaatttttagattttcaagttcaacttaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125221" stop="127472"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125521" g_stop="125636" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="215" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127171" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="457" r_length="242" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="458" polyA_stop="474"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E744792" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E744792" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125521" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127171"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAG-AAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTAC</genome_strand>
        <mrna_strand>GCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCT-ACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAAT-ATGT-ATGGGAT-ATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCT-AGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E295402" ref_strand="+" ref_description="SGN-E295402 [cLET-23-H17]">
      <seq>gcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttngaagaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125221" stop="127453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125521" g_stop="125636" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="216" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127152" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="442" r_length="226" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="443" polyA_stop="462"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E295402" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>442</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E295402" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125521" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127152"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAG</genome_strand>
        <mrna_strand>GCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTNG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E357949" ref_strand="+" ref_description="SGN-E357949 [cTOS-24-N16]">
      <seq>gcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctataaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125221" stop="127438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125521" g_stop="125636" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="216" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127145" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="435" r_length="219" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E357949" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>435</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357949" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125521" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127145"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAA</genome_strand>
        <mrna_strand>GCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E350327" ref_strand="+" ref_description="SGN-E350327 [cTOS-5-K17]">
      <seq>caaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctataaaaaannaaaaanaaaaaaaaaaaaaaaaaaaaaaaaaaaanaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaccccaatttggaatttttgccccctatttggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125222" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125522" g_stop="125636" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="215" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127136" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="425" r_length="210" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127137" i_stop="137282" i_length="10146">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.58"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="137283" g_stop="137388" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="426" r_stop="531" r_length="106" r_score="0.583"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E350327" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E350327" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125522" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127136"/>
          <exon e_start="137283" e_stop="137388"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATATGTTGATATCATTTTCTCAACTTTTATATTCGATTAGGAAAAGTAATTGAGAATTTAATCGATTATTTATTCGTGTATATACTATGTTGAGATCATTTTCTCAACTTGTATTTGAATAATGTAATGCAGTATTATGTATGTGTTAGTAAATTTAACGAATCGATCGAAATTATCATTAACTTCTAAACTAAATAAAATGAATGAAATGATTTTAGCCATTATATTATTAAACGATGAAAAACAAGTTGGTGCCAAAATTTAAAATAAAAATGAAAAAATCAAATATTATAACTTGTGGTCCAAGATGTTTCGAAGGTGATTGATATATTTATGTGAAATAGTACAACATCATGTCAATGTACTAATCAATATGTCAATTGATTTAATCATAATTTACAAAATAAATGACATTTTTTTGTATTCAATTATCAATTTAACTTTAGCTTCTCATTTTATTCATTAAATAAATTATAACCACATAAATTTTTCTTATAACTTTTCTTTCTTTAATTATTAAGATTTTTTCAAGTAGATCTCTTTAAATTACAAGTTTCAATATTTTTATTTAAAATTTTTATATTTAATTAAAAAACCTTCGGATAAATTGAGACGAAATGAGTAACAAAATATTTTTCTTAGACAAAATTATGACAAGTAGGACAATTGAGAACCATAGGATAAAATTGATGATTGTGTTCACAATTTATTACCAAATACCAATCACATGTCTCATGTGTGACTTGACATGTTTCATACGGCGTATTTTTATTATTTTTTCTTTTGTTTTCAAACTTAAAATACACAATTTTATCAGATATATCTATTATGATCATTATCTAAAAGGTTAATTTATTATCTTTTCATAATAATTTATTATCTCAATGTTATAGTAACGAAAAACATTGAGATAGTCGATATCGTTACAGTCACTCTACATATTTTAACTAATTAAACGTTAGAGTATAATATGAAATTACAAGAATTTAATTTAAAAAAATTGAGAAATCGAAGAATATAAGAATAATTTACATATCATTTTAAAAGCATGTTTTGTTGGTTGAATTATAATTGACAAATAAAAATGATATTCTTTTAAGGGAAAATTGTGTATAATAGCAAACTAATAACCTAAATTAAATGGAATAGCTAGGGTTTGATTTAATTTAATTGTGCTCCATAGCAAACATAAGCTAAAATTTGCCAGCGTCTCTCTCCCAAAAATCTCGCTCGCCACTCTCCATTCTCGCTCGCCTCTCTCGCTTTATACACAGAAGTGTATAATTCTGTTTTTGTTTTGTATAGAGCGAGAGAAAATTGTATATACAATTGCGAATTATACAATTGCAGTGAAATACAATTTTCTCTAGCTTTATACAACAGAAGTGTATACATTGTGTTCCTGTTTTTGTATAAAGCGAGAGAAACATATATCTTCTTGCTATACACTTATAATTAGGCAACATACATACATTTTAATTCAATTCAACTGTATGCAAAACAAATTATACAATTGCAGCGAAATAGGCCAGTGAATTATACAATTATATATGTATAGCAGATTATACAGTTTTATGTGTGCTATGGAGCGCAATTATGTAAAGTTTGTTATACCATACAAATATAAATTTTTCATTTGCTATATGTAAAAGTTGCACTTCTTTTAAAGACGGACTAGTAAGGTAATTTAATTTTTTTTTGTCTCTTATTTTGCAAAGAAAACAGGTCCTTTAATGGGCCAGGGACCGTTGGACTTGTGGATTTGAAGGAGTTTGCTGAGTGGGCTGATTAAGACTAGCCACGTGGGTTGTTGGAATACCTCTTGTCTTCTAGTGAACCCCATATGCCAAATTATTGTTGTCAACGTGGCCATCAATATGGGACCCACACATTTTATGCTACCATACCCCACCCCCCACCCCCACCACCCTACCCCATGTAGAAAAGCTACTATCATGCATCATCATCATGATACATAATGATGTTGGATGTGATATATGGGTATTTTCACGACGTAATATATAAACGTGTTCTTTCATTTCATCTCAGCTGGTATCTATGTCTTTTAACTTTGTGTGTAGACAAGTAAACATGCTTTTAAAGTAATAAGAAAAATTATTCTTATGTGGCAAAATACAAATCAGTTTGAGTGTATATCATCTTCGTGATACATGATGATGAAGATTGTGATACGTGGGTATTTTCACGATATTATATATAAACGTGTTTTTTAATTTCATCTCAACTGGTATCTATGTCTTTCAGCTTTGGATAGGTAAAATTAAATACTCAAACTTATGTTATATAATCTATGTAGCATAATTTCGAAATAATATAATGTATATCACGTAATGTATATAACTTTATATAAATTTTTAAATATTATTTTATACATAACTAAAATAAAAGAATATAGATATCAGTTAAAGTCGATGTATGATATAATTTCTTTTTATTTTTATTTTTTTGTATGGATTTAGAAGACTTGGAGATTGACCCACATTATCTTCTTTAAATTAGCTTTATTTTGTGGTTCAATCAAACTTGGTTGCTATATTGGTTGTCCCTTTTTGTATTTTTGTTCTTTTGTTCCATAGGAGTTGGATCTAACTAATACAAATCAATTTTTAACATAAATTATGCAATTATTTAAGGCTCAAATAAAATATTACCACTAAACTTTCTCTTTCGTAAAAGTCATTTCACCAAAAAGTTCTATATAATATTACCTTTTTTAACCCAAAAAAGGCAATTAGTGACCTTAAAAATTAAGTTTAATTCGGATTAGGAAATTGTCATCATCTTTTGGTAATTTATTATATAAAAATAATGGCTTAATGGTCAAAATTCATAACTTAAATGACACGTATCATAAAATATTTTTAGGCTTATATTATTATAATAATAATAATATTATGTTTCTTTCTCTTTCGTAGTAGTCATTTTACAAAAAAAGCTATATATTATATTTTTCTTTTTACCAAAAAGAGCAGTTAATAATAATTAATTTAGAAAAATGAAGACTTGTTTGCCAAACGATAAAAGTTCTTTTTAATCTTATTTGGATTATAAATCGTCACCTCCTAATTATTTTATTCTATAATACTTTTAGGATATGATTCAATATATTAAAAACCCATCACTTGAATAACACGTATCATCAATTATTTCAGGCACAAATGATAATAATATCTTTTTTTCTTTTTAGTGAAAGTCATTTTTACCTTAAAAAAAACAGTTATTAATCAAGAAAAAATATTAAAATTATTGCTTCCTTTTAAAACAATAAAATTGTTATAAATACACCGTATTGAATATATCAGTATTTACTAAATCAGCTTATAATTAAGTACGTAGTAAAATTACACAACTGAGTTCTAAAGAGGATAAATATTAAATAAATTTTATCATTGCTTTATGGAGATAGATAGACTACTTCGAAAGATTCTCTACTTACGTCCAACACCAACATACAAATTCTAAAAAGTGACTTTTGCAATCAAATAAGTAGCTTAAACAAACCGCATCTNNTCATTTTCGATAAATTTTGAGCTGTTATTAATAATATAACGTTCCTTATTTTATATTTAACAAAAAGTAAAATGAAAAAAAAATATATAAAAGTTGTAATATATAATGGACCAATCATAATACAACAGGTATATAATCAATTAAAAGAACATTTATGGGGTTCTCTTTTCTATAGTGCTCCATACTAAAAATTCCAATGTAACATATACATTATAACTATAAAGGTGATGTTGCAACTAATAAGAAAACATATCTAACAGAGGCAAATTCAGTATTTAAAGATTAATGAGACAGTTATTATTTTAATATATGTCTAAGCAAAACTTCTAATAATGATTAAGAAGTAATATCGTGTGATATGTGTTAAATATAAGTGCTATAATACGATTGAATTATGCATCACAGAAAATATCTTCAAACTATATACACAATATTTTTTGAAACAAATATACGTGCGCCCTCGCTTATATATATATGTTGGGAAATTTATTTTATTTTTTATTGAAAAAATTATTTTAAAAAAGAGAGTTTTATTCTTTTTGTTGAAGAAAATTAGTTGTAATTAACACACAGCAAAACTGAGCTGGAAGGTCAAAATTGCTTAGAAATAAATTAAGACAGGGTGGAAAAAAGAATATTTACCTAAAAAGAATGATTGAAGTGGTTTACATTACTCGATAAAGAATCTGATTATGTTCGAATCATATAATATAATAATAATAACAGGTGTAATATTTTTATTTATTTAATTATAATGTATAAGATTTGTATTATATACTCAATCATTGACAAGTTGAAAGTATTTAATTTTTCTTCTTCTCCACATAATAACACCAAACATATCATGAGGACTCCTGAAGATCCCCATAATATGCGGATCAAACATTTATATAATAAAATGAGATAAGACGCATAAAAAATTAAATAAAAATATAAGTTACTGTCATCAAAATATATTGTTACGATTACGATTATCACTATCAATTATCATTACAATAATCAACTGCACAATTAATATATCACTGAATCACTATAATTATTCACCATTAACATATTTATGTATCTATCACTATGAATAACCATTGTTAGTGACTAATATCAACCAACATTACCATTAATTACTATCGAACAGTTAACGTCAATCAATACTATTCTCAATCGACGTCTACGAATCATCAATATATTGTCATAGTTTTTTTAAAAAAATATGTATTTATACAAACATATAGTATCAAACTAATTTAGTATTTTATTTAAATATTATATTTATTATTATTATTAAATATATATTCAAACATGAAAAATAAATAATTCCAATTATTTAAATATAAATCTTAATAATCAGAGAATTTAAACATCTAAATCTCTATATGTATTTTAATTAAGTTAGAAGCTTAATCTTTAACAAACAAAACTAGGTCTTAAATAATCTTGAAGTTAAAGTATCATAATGGCCTCTATACGAAGCTTATTTATGTTAATTGCTAGTCACCTATATATAACGCAAAAAATAAGTCACCCTGCTATTTTTTTGGTTTTTAAGAAAATGATATACAATTTCTTTTAGTCAGTTTCGAAAAAAAAGATCTTTTTTTTTATAGCGATATTTTAATTTCAACTTTCATATGACATATATCTAAGATCACAATATTAAAAAATATTTTGATATATTTGACATAACTATAATTTAGAATCATTGAATCAAATTTTTTTTATTTTTTTTAAAAAATTTCATATCAAAACTCAATAATTCTATTTTAAACAAATGAAGTAAGCTTGCTAATTTTTTTAATACCAATTTGTCTAGCAGTTCATTGGCTTACATTTGCGTGACTGTATTGCCAATGGTTCTTTTTTTTTTTTTAAAGAAAAATAAAATACATAAGTAATCAGTATGAGTTTATGGGTTTTATTTATTTTATATTCTTGGTAGAGTATGTATGAGTTTATGATTCTTATCTATATATAAAAATATAATAATTTCCCATGGATTCTGCTTGATATTCGGAAAATAACTGATTAAACTATGAGATTTTTTCTATTTATATACTATATATATATATATATATATATATATATATATATGGAGTTAACATTTATAGGCATATGACAATTATTATAATTAAAGCCTTTAAATGTCTAGTGTTTCTATTAGGGCTGTGTATCGGTTGGTTCAGTTTGGTTTTAAAGTTTAACGGGTTGGCTTATTGATTATCGGTTTGTAGAGATGCTAAACCGTTATAGAACCATTAAGATATTGGCTTATCGGTTATTGATTTTTCGGTTTTTGATCTTTATCGGTTCGGTTATCGATTTAACCATTAAGATTTGACACAAAAGAAAAAACATTGAAAATCACTTAGAAACAAGGTGACAAACCAAATAAACCACGCACTTGAGTTCACAAGTTACATCTTGCTCAAAAGCAAACACTTTTACATTGTAGAATAATCAAGTGTTTGAGATAATAAAAAATAAAAGTAGGAAATTAAACTCCTAGTCGAGGACTTTATATGCAAAATGATATAAATATAATTATTTTAATTTACTATCGGGTTGTCAGTTAACCCATTAAGAAAAAACTTTAAACCGTTAAGAACCAATAACCCGATAACAAAAAAAATCAAAATTGTTATCAAAACCACTAATCCAATAACCCAATACTACAAATCAATAACTTTTTTATCGGTTCGGCTTATCGGTTTCGGTTCGATTTTGAACGGCCCTAGTTTAAACCGTTAAGAACCAATAACCCGATAACAAAAAAAATCAAAACTGTTATCAAAACCACTAATCCAATAACCCAATACTAGAAATCAATAACTTTTTTATCGGTTCGACTTATCGATTTCGGTTCGATTTTGAACGGCCCTAGTTTACATTGGTAGAGCTAAATTTTGTTTGAGGTAAGTTAAATTAATATCGATCAAAAAATTATACTATATATTATTTTTCAAAATATATATCAAAATTTCTTGATTTTTTCCTTGCGTTTTATTTTTTAAAGAAATGGAGGGAGACTAGTGCAAAGACATGCAAAATATTGTCCTAGAGAAAATGGATATAATCTCATGAAATATGAAGCTATGTGGATTAAAATGCTGAATAATCTTTATATATGAATAAAAAGAGAAATTATTAATTATTCTGTTTTCTTAATAAACAAATCCAAGTCTTATCTTAAACTAGACAGGATACAGTCACCATTAATTAAGTTGCTTACAATAGGGGCATCAGAAAAAAAAAGGGCAAAATTGTATATAATCACTCATTTTGATTAAATATATGTGGTTGAAATTTTTCATTCTCGTATACATTAATATATTCAGCGAAATTTTACAAATAAAGTCTGAAAGGTAAAATATATGTATCCCTTATTCATACAACGTAGAAATAAAAGAGACTATTTCTTAAAGATTCTTCGCGCAAATACAAAAATTAAACATTCTAATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</genome_strand>
        <mrna_strand>CAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAANNAAAAANAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCAATTTGGAATTTTTGCCCCCTATTTGGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E715789" ref_strand="+" ref_description="SGN-E715789 [FB15BB03]">
      <seq>caaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaaaaaaccctcggggggggggcccgaacccattttcccaaaaaagggggctataaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125222" stop="153949"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125522" g_stop="125636" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="215" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127144" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="433" r_length="218" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127145" i_stop="128297" i_length="1153">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="445" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="137305" i_length="8996">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="137306" g_stop="137385" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="446" r_stop="525" r_length="80" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E715789" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E715789" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125522" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127144"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="137306" e_stop="137385"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATATGTTGATATCATTTTCTCAACTTTTATATTCGATTAGGAAAAGTAATTGAGAATTTAATCGATTATTTATTCGTGTATATACTATGTTGAGATCATTTTCTCAACTTGTATTTGAATAATGTAATGCAGTATTATGTATGTGTTAGTAAATTTAACGAATCGATCGAAATTATCATTAACTTCTAAACTAAATAAAATGAATGAAATGATTTTAGCCATTATATTATTAAACGATGAAAAACAAGTTGGTGCCAAAATTTAAAATAAAAATGAAAAAATCAAATATTATAACTTGTGGTCCAAGATGTTTCGAAGGTGATTGATATATTTATGTGAAATAGTACAACATCATGTCAATGTACTAATCAATATGTCAATTGATTTAATCATAATTTACAAAATAAATGACATTTTTTTGTATTCAATTATCAATTTAACTTTAGCTTCTCATTTTATTCATTAAATAAATTATAACCACATAAATTTTTCTTATAACTTTTCTTTCTTTAATTATTAAGATTTTTTCAAGTAGATCTCTTTAAATTACAAGTTTCAATATTTTTATTTAAAATTTTTATATTTAATTAAAAAACCTTCGGATAAATTGAGACGAAATGAGTAACAAAATATTTTTCTTAGACAAAATTATGACAAGTAGGACAATTGAGAACCATAGGATAAAATTGATGATTGTGTTCACAATTTATTACCAAATACCAATCACATGTCTCATGTGTGACTTGACATGTTTCATACGGCGTATTTTTATTATTTTTTCTTTTGTTTTCAAACTTAAAATACACAATTTTATCAGATATATCTATTATGATCATTATCTAAAAGGTTAATTTATTATCTTTTCATAATAATTTATTATCTCAATGTTATAGTAACGAAAAACATTGAGATAGTCGATATCGTTACAGTCACTCTACATATTTTAACTAATTAAACGTTAGAGTATAATATGAAATTACAAGAATTTAATTTAAAAAAATTGAGAAATCGAAGAATATAAGAATAATTTACATATCATTTTAAAAGCATGTTTTGTTGGTTGAATTATAATTGACAAATAAAAATGATATTCTTTTAAGGGAAAATTGTGTATAATAGCAAACTAATAACCTAAATTAAATGGAATAGCTAGGGTTTGATTTAATTTAATTGTGCTCCATAGCAAACATAAGCTAAAATTTGCCAGCGTCTCTCTCCCAAAAATCTCGCTCGCCACTCTCCATTCTCGCTCGCCTCTCTCGCTTTATACACAGAAGTGTATAATTCTGTTTTTGTTTTGTATAGAGCGAGAGAAAATTGTATATACAATTGCGAATTATACAATTGCAGTGAAATACAATTTTCTCTAGCTTTATACAACAGAAGTGTATACATTGTGTTCCTGTTTTTGTATAAAGCGAGAGAAACATATATCTTCTTGCTATACACTTATAATTAGGCAACATACATACATTTTAATTCAATTCAACTGTATGCAAAACAAATTATACAATTGCAGCGAAATAGGCCAGTGAATTATACAATTATATATGTATAGCAGATTATACAGTTTTATGTGTGCTATGGAGCGCAATTATGTAAAGTTTGTTATACCATACAAATATAAATTTTTCATTTGCTATATGTAAAAGTTGCACTTCTTTTAAAGACGGACTAGTAAGGTAATTTAATTTTTTTTTGTCTCTTATTTTGCAAAGAAAACAGGTCCTTTAATGGGCCAGGGACCGTTGGACTTGTGGATTTGAAGGAGTTTGCTGAGTGGGCTGATTAAGACTAGCCACGTGGGTTGTTGGAATACCTCTTGTCTTCTAGTGAACCCCATATGCCAAATTATTGTTGTCAACGTGGCCATCAATATGGGACCCACACATTTTATGCTACCATACCCCACCCCCCACCCCCACCACCCTACCCCATGTAGAAAAGCTACTATCATGCATCATCATCATGATACATAATGATGTTGGATGTGATATATGGGTATTTTCACGACGTAATATATAAACGTGTTCTTTCATTTCATCTCAGCTGGTATCTATGTCTTTTAACTTTGTGTGTAGACAAGTAAACATGCTTTTAAAGTAATAAGAAAAATTATTCTTATGTGGCAAAATACAAATCAGTTTGAGTGTATATCATCTTCGTGATACATGATGATGAAGATTGTGATACGTGGGTATTTTCACGATATTATATATAAACGTGTTTTTTAATTTCATCTCAACTGGTATCTATGTCTTTCAGCTTTGGATAGGTAAAATTAAATACTCAAACTTATGTTATATAATCTATGTAGCATAATTTCGAAATAATATAATGTATATCACGTAATGTATATAACTTTATATAAATTTTTAAATATTATTTTATACATAACTAAAATAAAAGAATATAGATATCAGTTAAAGTCGATGTATGATATAATTTCTTTTTATTTTTATTTTTTTGTATGGATTTAGAAGACTTGGAGATTGACCCACATTATCTTCTTTAAATTAGCTTTATTTTGTGGTTCAATCAAACTTGGTTGCTATATTGGTTGTCCCTTTTTGTATTTTTGTTCTTTTGTTCCATAGGAGTTGGATCTAACTAATACAAATCAATTTTTAACATAAATTATGCAATTATTTAAGGCTCAAATAAAATATTACCACTAAACTTTCTCTTTCGTAAAAGTCATTTCACCAAAAAGTTCTATATAATATTACCTTTTTTAACCCAAAAAAGGCAATTAGTGACCTTAAAAATTAAGTTTAATTCGGATTAGGAAATTGTCATCATCTTTTGGTAATTTATTATATAAAAATAATGGCTTAATGGTCAAAATTCATAACTTAAATGACACGTATCATAAAATATTTTTAGGCTTATATTATTATAATAATAATAATATTATGTTTCTTTCTCTTTCGTAGTAGTCATTTTACAAAAAAAGCTATATATTATATTTTTCTTTTTACCAAAAAGAGCAGTTAATAATAATTAATTTAGAAAAATGAAGACTTGTTTGCCAAACGATAAAAGTTCTTTTTAATCTTATTTGGATTATAAATCGTCACCTCCTAATTATTTTATTCTATAATACTTTTAGGATATGATTCAATATATTAAAAACCCATCACTTGAATAACACGTATCATCAATTATTTCAGGCACAAATGATAATAATATCTTTTTTTCTTTTTAGTGAAAGTCATTTTTACCTTAAAAAAAACAGTTATTAATCAAGAAAAAATATTAAAATTATTGCTTCCTTTTAAAACAATAAAATTGTTATAAATACACCGTATTGAATATATCAGTATTTACTAAATCAGCTTATAATTAAGTACGTAGTAAAATTACACAACTGAGTTCTAAAGAGGATAAATATTAAATAAATTTTATCATTGCTTTATGGAGATAGATAGACTACTTCGAAAGATTCTCTACTTACGTCCAACACCAACATACAAATTCTAAAAAGTGACTTTTGCAATCAAATAAGTAGCTTAAACAAACCGCATCTNNTCATTTTCGATAAATTTTGAGCTGTTATTAATAATATAACGTTCCTTATTTTATATTTAACAAAAAGTAAAATGAAAAAAAAATATATAAAAGTTGTAATATATAATGGACCAATCATAATACAACAGGTATATAATCAATTAAAAGAACATTTATGGGGTTCTCTTTTCTATAGTGCTCCATACTAAAAATTCCAATGTAACATATACATTATAACTATAAAGGTGATGTTGCAACTAATAAGAAAACATATCTAACAGAGGCAAATTCAGTATTTAAAGATTAATGAGACAGTTATTATTTTAATATATGTCTAAGCAAAACTTCTAATAATGATTAAGAAGTAATATCGTGTGATATGTGTTAAATATAAGTGCTATAATACGATTGAATTATGCATCACAGAAAATATCTTCAAACTATATACACAATATTTTTTGAAACAAATATACGTGCGCCCTCGCTTATATATATATGTTGGGAAATTTATTTTATTTTTTATTGAAAAAATTATTTTAAAAAAGAGAGTTTTATTCTTTTTGTTGAAGAAAATTAGTTGTAATTAACACACAGCAAAACTGAGCTGGAAGGTCAAAATTGCTTAGAAATAAATTAAGACAGGGTGGAAAAAAGAATATTTACCTAAAAAGAATGATTGAAGTGGTTTACATTACTCGATAAAGAATCTGATTATGTTCGAATCATATAATATAATAATAATAACAGGTGTAATATTTTTATTTATTTAATTATAATGTATAAGATTTGTATTATATACTCAATCATTGACAAGTTGAAAGTATTTAATTTTTCTTCTTCTCCACATAATAACACCAAACATATCATGAGGACTCCTGAAGATCCCCATAATATGCGGATCAAACATTTATATAATAAAATGAGATAAGACGCATAAAAAATTAAATAAAAATATAAGTTACTGTCATCAAAATATATTGTTACGATTACGATTATCACTATCAATTATCATTACAATAATCAACTGCACAATTAATATATCACTGAATCACTATAATTATTCACCATTAACATATTTATGTATCTATCACTATGAATAACCATTGTTAGTGACTAATATCAACCAACATTACCATTAATTACTATCGAACAGTTAACGTCAATCAATACTATTCTCAATCGACGTCTACGAATCATCAATATATTGTCATAGTTTTTTTAAAAAAATATGTATTTATACAAACATATAGTATCAAACTAATTTAGTATTTTATTTAAATATTATATTTATTATTATTATTAAATATATATTCAAACATGAAAAATAAATAATTCCAATTATTTAAATATAAATCTTAATAATCAGAGAATTTAAACATCTAAATCTCTATATGTATTTTAATTAAGTTAGAAGCTTAATCTTTAACAAACAAAACTAGGTCTTAAATAATCTTGAAGTTAAAGTATCATAATGGCCTCTATACGAAGCTTATTTATGTTAATTGCTAGTCACCTATATATAACGCAAAAAATAAGTCACCCTGCTATTTTTTTGGTTTTTAAGAAAATGATATACAATTTCTTTTAGTCAGTTTCGAAAAAAAAGATCTTTTTTTTTATAGCGATATTTTAATTTCAACTTTCATATGACATATATCTAAGATCACAATATTAAAAAATATTTTGATATATTTGACATAACTATAATTTAGAATCATTGAATCAAATTTTTTTTATTTTTTTTAAAAAATTTCATATCAAAACTCAATAATTCTATTTTAAACAAATGAAGTAAGCTTGCTAATTTTTTTAATACCAATTTGTCTAGCAGTTCATTGGCTTACATTTGCGTGACTGTATTGCCAATGGTTCTTTTTTTTTTTTTAAAGAAAAATAAAATACATAAGTAATCAGTATGAGTTTATGGGTTTTATTTATTTTATATTCTTGGTAGAGTATGTATGAGTTTATGATTCTTATCTATATATAAAAATATAATAATTTCCCATGGATTCTGCTTGATATTCGGAAAATAACTGATTAAACTATGAGATTTTTTCTATTTATATACTATATATATATATATATATATATATATATATATATGGAGTTAACATTTATAGGCATATGACAATTATTATAATTAAAGCCTTTAAATGTCTAGTGTTTCTATTAGGGCTGTGTATCGGTTGGTTCAGTTTGGTTTTAAAGTTTAACGGGTTGGCTTATTGATTATCGGTTTGTAGAGATGCTAAACCGTTATAGAACCATTAAGATATTGGCTTATCGGTTATTGATTTTTCGGTTTTTGATCTTTATCGGTTCGGTTATCGATTTAACCATTAAGATTTGACACAAAAGAAAAAACATTGAAAATCACTTAGAAACAAGGTGACAAACCAAATAAACCACGCACTTGAGTTCACAAGTTACATCTTGCTCAAAAGCAAACACTTTTACATTGTAGAATAATCAAGTGTTTGAGATAATAAAAAATAAAAGTAGGAAATTAAACTCCTAGTCGAGGACTTTATATGCAAAATGATATAAATATAATTATTTTAATTTACTATCGGGTTGTCAGTTAACCCATTAAGAAAAAACTTTAAACCGTTAAGAACCAATAACCCGATAACAAAAAAAATCAAAATTGTTATCAAAACCACTAATCCAATAACCCAATACTACAAATCAATAACTTTTTTATCGGTTCGGCTTATCGGTTTCGGTTCGATTTTGAACGGCCCTAGTTTAAACCGTTAAGAACCAATAACCCGATAACAAAAAAAATCAAAACTGTTATCAAAACCACTAATCCAATAACCCAATACTAGAAATCAATAACTTTTTTATCGGTTCGACTTATCGATTTCGGTTCGATTTTGAACGGCCCTAGTTTACATTGGTAGAGCTAAATTTTGTTTGAGGTAAGTTAAATTAATATCGATCAAAAAATTATACTATATATTATTTTTCAAAATATATATCAAAATTTCTTGATTTTTTCCTTGCGTTTTATTTTTTAAAGAAATGGAGGGAGACTAGTGCAAAGACATGCAAAATATTGTCCTAGAGAAAATGGATATAATCTCATGAAATATGAAGCTATGTGGATTAAAATGCTGAATAATCTTTATATATGAATAAAAAGAGAAATTATTAATTATTCTGTTTTCTTAATAAACAAATCCAAGTCTTATCTTAAACTAGACAGGATACAGTCACCATTAATTAAGTTGCTTACAATAGGGGCATCAGAAAAAAAAAGGGCAAAATTGTATATAATCACTCATTTTGATTAAATATATGTGGTTGAAATTTTTCATTCTCGTATACATTAATATATTCAGCGAAATTTTACAAATAAAGTCTGAAAGGTAAAATATATGTATCCCTTATTCATACAACGTAGAAATAAAAGAGACTATTTCTTAAAGATTCTTCGCGCAAATACAAAAATTAAACATTCTAATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</genome_strand>
        <mrna_strand>CAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAGAAAAAAACCCTCGGGGGGGGGGCCCGAACCCATTTTCCCAAAAAAGGGGGCTATAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E716774" ref_strand="+" ref_description="SGN-E716774 [FB18AA03]">
      <seq>caaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaccccggggggggggcggggacccatttcccccaaaaaggggggaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125222" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125522" g_stop="125636" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="215" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127144" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="433" r_length="218" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127145" i_stop="128297" i_length="1153">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="445" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="137305" i_length="8996">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="137306" g_stop="137384" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="446" r_stop="524" r_length="79" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E716774" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>524</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E716774" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125522" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127144"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="137306" e_stop="137384"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATATGTTGATATCATTTTCTCAACTTTTATATTCGATTAGGAAAAGTAATTGAGAATTTAATCGATTATTTATTCGTGTATATACTATGTTGAGATCATTTTCTCAACTTGTATTTGAATAATGTAATGCAGTATTATGTATGTGTTAGTAAATTTAACGAATCGATCGAAATTATCATTAACTTCTAAACTAAATAAAATGAATGAAATGATTTTAGCCATTATATTATTAAACGATGAAAAACAAGTTGGTGCCAAAATTTAAAATAAAAATGAAAAAATCAAATATTATAACTTGTGGTCCAAGATGTTTCGAAGGTGATTGATATATTTATGTGAAATAGTACAACATCATGTCAATGTACTAATCAATATGTCAATTGATTTAATCATAATTTACAAAATAAATGACATTTTTTTGTATTCAATTATCAATTTAACTTTAGCTTCTCATTTTATTCATTAAATAAATTATAACCACATAAATTTTTCTTATAACTTTTCTTTCTTTAATTATTAAGATTTTTTCAAGTAGATCTCTTTAAATTACAAGTTTCAATATTTTTATTTAAAATTTTTATATTTAATTAAAAAACCTTCGGATAAATTGAGACGAAATGAGTAACAAAATATTTTTCTTAGACAAAATTATGACAAGTAGGACAATTGAGAACCATAGGATAAAATTGATGATTGTGTTCACAATTTATTACCAAATACCAATCACATGTCTCATGTGTGACTTGACATGTTTCATACGGCGTATTTTTATTATTTTTTCTTTTGTTTTCAAACTTAAAATACACAATTTTATCAGATATATCTATTATGATCATTATCTAAAAGGTTAATTTATTATCTTTTCATAATAATTTATTATCTCAATGTTATAGTAACGAAAAACATTGAGATAGTCGATATCGTTACAGTCACTCTACATATTTTAACTAATTAAACGTTAGAGTATAATATGAAATTACAAGAATTTAATTTAAAAAAATTGAGAAATCGAAGAATATAAGAATAATTTACATATCATTTTAAAAGCATGTTTTGTTGGTTGAATTATAATTGACAAATAAAAATGATATTCTTTTAAGGGAAAATTGTGTATAATAGCAAACTAATAACCTAAATTAAATGGAATAGCTAGGGTTTGATTTAATTTAATTGTGCTCCATAGCAAACATAAGCTAAAATTTGCCAGCGTCTCTCTCCCAAAAATCTCGCTCGCCACTCTCCATTCTCGCTCGCCTCTCTCGCTTTATACACAGAAGTGTATAATTCTGTTTTTGTTTTGTATAGAGCGAGAGAAAATTGTATATACAATTGCGAATTATACAATTGCAGTGAAATACAATTTTCTCTAGCTTTATACAACAGAAGTGTATACATTGTGTTCCTGTTTTTGTATAAAGCGAGAGAAACATATATCTTCTTGCTATACACTTATAATTAGGCAACATACATACATTTTAATTCAATTCAACTGTATGCAAAACAAATTATACAATTGCAGCGAAATAGGCCAGTGAATTATACAATTATATATGTATAGCAGATTATACAGTTTTATGTGTGCTATGGAGCGCAATTATGTAAAGTTTGTTATACCATACAAATATAAATTTTTCATTTGCTATATGTAAAAGTTGCACTTCTTTTAAAGACGGACTAGTAAGGTAATTTAATTTTTTTTTGTCTCTTATTTTGCAAAGAAAACAGGTCCTTTAATGGGCCAGGGACCGTTGGACTTGTGGATTTGAAGGAGTTTGCTGAGTGGGCTGATTAAGACTAGCCACGTGGGTTGTTGGAATACCTCTTGTCTTCTAGTGAACCCCATATGCCAAATTATTGTTGTCAACGTGGCCATCAATATGGGACCCACACATTTTATGCTACCATACCCCACCCCCCACCCCCACCACCCTACCCCATGTAGAAAAGCTACTATCATGCATCATCATCATGATACATAATGATGTTGGATGTGATATATGGGTATTTTCACGACGTAATATATAAACGTGTTCTTTCATTTCATCTCAGCTGGTATCTATGTCTTTTAACTTTGTGTGTAGACAAGTAAACATGCTTTTAAAGTAATAAGAAAAATTATTCTTATGTGGCAAAATACAAATCAGTTTGAGTGTATATCATCTTCGTGATACATGATGATGAAGATTGTGATACGTGGGTATTTTCACGATATTATATATAAACGTGTTTTTTAATTTCATCTCAACTGGTATCTATGTCTTTCAGCTTTGGATAGGTAAAATTAAATACTCAAACTTATGTTATATAATCTATGTAGCATAATTTCGAAATAATATAATGTATATCACGTAATGTATATAACTTTATATAAATTTTTAAATATTATTTTATACATAACTAAAATAAAAGAATATAGATATCAGTTAAAGTCGATGTATGATATAATTTCTTTTTATTTTTATTTTTTTGTATGGATTTAGAAGACTTGGAGATTGACCCACATTATCTTCTTTAAATTAGCTTTATTTTGTGGTTCAATCAAACTTGGTTGCTATATTGGTTGTCCCTTTTTGTATTTTTGTTCTTTTGTTCCATAGGAGTTGGATCTAACTAATACAAATCAATTTTTAACATAAATTATGCAATTATTTAAGGCTCAAATAAAATATTACCACTAAACTTTCTCTTTCGTAAAAGTCATTTCACCAAAAAGTTCTATATAATATTACCTTTTTTAACCCAAAAAAGGCAATTAGTGACCTTAAAAATTAAGTTTAATTCGGATTAGGAAATTGTCATCATCTTTTGGTAATTTATTATATAAAAATAATGGCTTAATGGTCAAAATTCATAACTTAAATGACACGTATCATAAAATATTTTTAGGCTTATATTATTATAATAATAATAATATTATGTTTCTTTCTCTTTCGTAGTAGTCATTTTACAAAAAAAGCTATATATTATATTTTTCTTTTTACCAAAAAGAGCAGTTAATAATAATTAATTTAGAAAAATGAAGACTTGTTTGCCAAACGATAAAAGTTCTTTTTAATCTTATTTGGATTATAAATCGTCACCTCCTAATTATTTTATTCTATAATACTTTTAGGATATGATTCAATATATTAAAAACCCATCACTTGAATAACACGTATCATCAATTATTTCAGGCACAAATGATAATAATATCTTTTTTTCTTTTTAGTGAAAGTCATTTTTACCTTAAAAAAAACAGTTATTAATCAAGAAAAAATATTAAAATTATTGCTTCCTTTTAAAACAATAAAATTGTTATAAATACACCGTATTGAATATATCAGTATTTACTAAATCAGCTTATAATTAAGTACGTAGTAAAATTACACAACTGAGTTCTAAAGAGGATAAATATTAAATAAATTTTATCATTGCTTTATGGAGATAGATAGACTACTTCGAAAGATTCTCTACTTACGTCCAACACCAACATACAAATTCTAAAAAGTGACTTTTGCAATCAAATAAGTAGCTTAAACAAACCGCATCTNNTCATTTTCGATAAATTTTGAGCTGTTATTAATAATATAACGTTCCTTATTTTATATTTAACAAAAAGTAAAATGAAAAAAAAATATATAAAAGTTGTAATATATAATGGACCAATCATAATACAACAGGTATATAATCAATTAAAAGAACATTTATGGGGTTCTCTTTTCTATAGTGCTCCATACTAAAAATTCCAATGTAACATATACATTATAACTATAAAGGTGATGTTGCAACTAATAAGAAAACATATCTAACAGAGGCAAATTCAGTATTTAAAGATTAATGAGACAGTTATTATTTTAATATATGTCTAAGCAAAACTTCTAATAATGATTAAGAAGTAATATCGTGTGATATGTGTTAAATATAAGTGCTATAATACGATTGAATTATGCATCACAGAAAATATCTTCAAACTATATACACAATATTTTTTGAAACAAATATACGTGCGCCCTCGCTTATATATATATGTTGGGAAATTTATTTTATTTTTTATTGAAAAAATTATTTTAAAAAAGAGAGTTTTATTCTTTTTGTTGAAGAAAATTAGTTGTAATTAACACACAGCAAAACTGAGCTGGAAGGTCAAAATTGCTTAGAAATAAATTAAGACAGGGTGGAAAAAAGAATATTTACCTAAAAAGAATGATTGAAGTGGTTTACATTACTCGATAAAGAATCTGATTATGTTCGAATCATATAATATAATAATAATAACAGGTGTAATATTTTTATTTATTTAATTATAATGTATAAGATTTGTATTATATACTCAATCATTGACAAGTTGAAAGTATTTAATTTTTCTTCTTCTCCACATAATAACACCAAACATATCATGAGGACTCCTGAAGATCCCCATAATATGCGGATCAAACATTTATATAATAAAATGAGATAAGACGCATAAAAAATTAAATAAAAATATAAGTTACTGTCATCAAAATATATTGTTACGATTACGATTATCACTATCAATTATCATTACAATAATCAACTGCACAATTAATATATCACTGAATCACTATAATTATTCACCATTAACATATTTATGTATCTATCACTATGAATAACCATTGTTAGTGACTAATATCAACCAACATTACCATTAATTACTATCGAACAGTTAACGTCAATCAATACTATTCTCAATCGACGTCTACGAATCATCAATATATTGTCATAGTTTTTTTAAAAAAATATGTATTTATACAAACATATAGTATCAAACTAATTTAGTATTTTATTTAAATATTATATTTATTATTATTATTAAATATATATTCAAACATGAAAAATAAATAATTCCAATTATTTAAATATAAATCTTAATAATCAGAGAATTTAAACATCTAAATCTCTATATGTATTTTAATTAAGTTAGAAGCTTAATCTTTAACAAACAAAACTAGGTCTTAAATAATCTTGAAGTTAAAGTATCATAATGGCCTCTATACGAAGCTTATTTATGTTAATTGCTAGTCACCTATATATAACGCAAAAAATAAGTCACCCTGCTATTTTTTTGGTTTTTAAGAAAATGATATACAATTTCTTTTAGTCAGTTTCGAAAAAAAAGATCTTTTTTTTTATAGCGATATTTTAATTTCAACTTTCATATGACATATATCTAAGATCACAATATTAAAAAATATTTTGATATATTTGACATAACTATAATTTAGAATCATTGAATCAAATTTTTTTTATTTTTTTTAAAAAATTTCATATCAAAACTCAATAATTCTATTTTAAACAAATGAAGTAAGCTTGCTAATTTTTTTAATACCAATTTGTCTAGCAGTTCATTGGCTTACATTTGCGTGACTGTATTGCCAATGGTTCTTTTTTTTTTTTTAAAGAAAAATAAAATACATAAGTAATCAGTATGAGTTTATGGGTTTTATTTATTTTATATTCTTGGTAGAGTATGTATGAGTTTATGATTCTTATCTATATATAAAAATATAATAATTTCCCATGGATTCTGCTTGATATTCGGAAAATAACTGATTAAACTATGAGATTTTTTCTATTTATATACTATATATATATATATATATATATATATATATATATGGAGTTAACATTTATAGGCATATGACAATTATTATAATTAAAGCCTTTAAATGTCTAGTGTTTCTATTAGGGCTGTGTATCGGTTGGTTCAGTTTGGTTTTAAAGTTTAACGGGTTGGCTTATTGATTATCGGTTTGTAGAGATGCTAAACCGTTATAGAACCATTAAGATATTGGCTTATCGGTTATTGATTTTTCGGTTTTTGATCTTTATCGGTTCGGTTATCGATTTAACCATTAAGATTTGACACAAAAGAAAAAACATTGAAAATCACTTAGAAACAAGGTGACAAACCAAATAAACCACGCACTTGAGTTCACAAGTTACATCTTGCTCAAAAGCAAACACTTTTACATTGTAGAATAATCAAGTGTTTGAGATAATAAAAAATAAAAGTAGGAAATTAAACTCCTAGTCGAGGACTTTATATGCAAAATGATATAAATATAATTATTTTAATTTACTATCGGGTTGTCAGTTAACCCATTAAGAAAAAACTTTAAACCGTTAAGAACCAATAACCCGATAACAAAAAAAATCAAAATTGTTATCAAAACCACTAATCCAATAACCCAATACTACAAATCAATAACTTTTTTATCGGTTCGGCTTATCGGTTTCGGTTCGATTTTGAACGGCCCTAGTTTAAACCGTTAAGAACCAATAACCCGATAACAAAAAAAATCAAAACTGTTATCAAAACCACTAATCCAATAACCCAATACTAGAAATCAATAACTTTTTTATCGGTTCGACTTATCGATTTCGGTTCGATTTTGAACGGCCCTAGTTTACATTGGTAGAGCTAAATTTTGTTTGAGGTAAGTTAAATTAATATCGATCAAAAAATTATACTATATATTATTTTTCAAAATATATATCAAAATTTCTTGATTTTTTCCTTGCGTTTTATTTTTTAAAGAAATGGAGGGAGACTAGTGCAAAGACATGCAAAATATTGTCCTAGAGAAAATGGATATAATCTCATGAAATATGAAGCTATGTGGATTAAAATGCTGAATAATCTTTATATATGAATAAAAAGAGAAATTATTAATTATTCTGTTTTCTTAATAAACAAATCCAAGTCTTATCTTAAACTAGACAGGATACAGTCACCATTAATTAAGTTGCTTACAATAGGGGCATCAGAAAAAAAAAGGGCAAAATTGTATATAATCACTCATTTTGATTAAATATATGTGGTTGAAATTTTTCATTCTCGTATACATTAATATATTCAGCGAAATTTTACAAATAAAGTCTGAAAGGTAAAATATATGTATCCCTTATTCATACAACGTAGAAATAAAAGAGACTATTTCTTAAAGATTCTTCGCGCAAATACAAAAATTAAACATTCTAATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</genome_strand>
        <mrna_strand>CAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAACCCCGGGGGGGGGGCGGGGACCCATTTCCCCCAAAAAGGGGGGAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E732728" ref_strand="+" ref_description="SGN-E732728 [LB02DH05]">
      <seq>caaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagattttcaagttcaacttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125222" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125522" g_stop="125636" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="215" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127175" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="464" r_length="249" r_score="0.984"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127176" i_stop="128297" i_length="1122">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="476" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="130300" i_length="1991">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="130301" g_stop="130321" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="497" r_length="21" r_score="0.857"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E732728" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>497</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E732728" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125522" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127175"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="130301" e_stop="130321"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATA</genome_strand>
        <mrna_strand>CAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTAAAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E568664" ref_strand="+" ref_description="SGN-E568664 [12982]">
      <seq>caaaagtagggtttcttacaaacacatcgcgcagcctcgcttttctgcctttgtgaagatgggtcactctaacatctggaacgctcatccaaagaactacggccctgctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaagggaaattggcttcattaagtaccgttaaaatctctcatatgagcatctacggggacctctacatgtggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgtttaacttttggaagtgaactgctatgtggacctaagaaagactagcttttttaaatttaatattttgttctatacattcctaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125222" stop="127445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125522" g_stop="125636" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="0.861"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="220" r_length="101" r_score="0.960"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.92"/>
            <acceptor a_prob="0.993" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127144" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="435" r_length="215" r_score="0.894"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="436" polyA_stop="448"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E568664" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E568664" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125522" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127144"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGC-TTT-T--C-T-GTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAA-GGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGC-TTTTAAGATTTTATATTTTGTTCTATACATTCCTA</genome_strand>
        <mrna_strand>CAAAAGTAGGG-TTTCTTACAAACACATCGCGCAGCCTCGCTTTTCTGCCTTTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCATCCAAAGAACTACGGCCCT-GCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTCTCATATGAGCATCTACGGGGACCTCTACATGTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTTAACTTTTGGAAGTGAACTGCTATGTGGACCTAAGAAAGACTAGCTTTTTTAAATTTAATATTTTGTTCTATACATTCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E734367" ref_strand="+" ref_description="SGN-E734367 [LB12BH11]">
      <seq>caaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125222" stop="127438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125522" g_stop="125636" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="215" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127144" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="433" r_length="218" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E734367" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E734367" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125522" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127144"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTA</genome_strand>
        <mrna_strand>CAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E354039" ref_strand="+" ref_description="SGN-E354039 [cTOS-16-C8]">
      <seq>caaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125222" stop="127432"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125522" g_stop="125636" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="215" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127132" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="421" r_length="206" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E354039" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354039" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125522" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127132"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTC</genome_strand>
        <mrna_strand>CAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E325771" ref_strand="+" ref_description="SGN-E325771 [cTOC-12-A17]">
      <seq>caaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttnannnnnaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125222" stop="127421"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125522" g_stop="125636" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="215" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127121" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="410" r_length="195" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="418" polyA_stop="431"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E325771" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>410</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E325771" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125522" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127121"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTT</genome_strand>
        <mrna_strand>CAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E606064" ref_strand="+" ref_description="SGN-E606064 [21999]">
      <seq>caaaagtagggtttcttacaaacacatcgcgcagcctcgcttttctgccttgtgaagatgggtcactctaacatctggaacgctcatccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatctctcatatgagcatctacggggacctctacatgtggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgtttaacttttggaagtgaactgctatgtggacctaagaaagactagctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125222" stop="127411"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125522" g_stop="125636" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="0.887"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="219" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127111" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="400" r_length="181" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E606064" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>400</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E606064" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125522" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127111"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGC-TTT-T--C-TGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGCTT</genome_strand>
        <mrna_strand>CAAAAGTAGGG-TTTCTTACAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCATCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTCTCATATGAGCATCTACGGGGACCTCTACATGTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTTAACTTTTGGAAGTGAACTGCTATGTGGACCTAAGAAAGACTAGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E295166" ref_strand="+" ref_description="SGN-E295166 [cLET-20-H7]">
      <seq>aaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttcanaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125223" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125523" g_stop="125636" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="214" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127132" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="420" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127133" i_stop="128297" i_length="1165">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="432" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="130574" i_length="2265">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="130575" g_stop="130613" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="433" r_stop="471" r_length="39" r_score="0.667"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E295166" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E295166" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125523" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127132"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="130575" e_stop="130613"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATATGTTGATATCATTTTCTCAACTTTTATATTCGATTAGGAAAAGTAATTGAGAATTTAATCGATTATTTATTCGTGTATATACTATGTTGAGATCATTTTCTCAACTTGTATTTGAATAATGTAATGCAGTATTATGTATGTGTTAGTAAATTTAACGAATCGATCGAAATTATCATTAACTTCTAAACTAAATAAAATGAATGAAATGATTTTAGCCATTATATTATTAAACGATGAAAAACAAGTTGGTGCCAAAATTTAAAATAAAAATGAAAAAATCAAATATTATAAC</genome_strand>
        <mrna_strand>AAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ANAAAAAAAAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E342937" ref_strand="+" ref_description="SGN-E342937 [cTOF-11-I20]">
      <seq>aaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125223" stop="127453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125523" g_stop="125636" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="214" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127160" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="448" r_length="234" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E342937" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>448</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342937" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125523" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127160"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAA</genome_strand>
        <mrna_strand>AAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E586744" ref_strand="-" ref_description="SGN-E586744 [75578]">
      <seq>aaaagtagggtttcttacaaacacatcgcgcagcctcgcttttctgccttgtgaagatgggtcactctaacatctggaacgctcatccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatctctcatatgagcatctacggggacctctacatgtggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgtttaacttttggaagtgaactgctatgtggacctaagaaagactagcttttttaaatttaatattttgttctatacattcctaattttttgtttttacctcgtgccgaattcggcacgagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125245" stop="127457"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125523" g_stop="125636" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="118" r_length="118" r_score="0.886"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="218" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127152" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="441" r_length="223" r_score="0.894"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E586744" ref_strand="-">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>440</cumulative_length_of_scored_exons>
        <coverage percentage="0.934" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E586744" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="125523" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127152"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGC-TTT-T--C-TGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGC-TTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAG</genome_strand>
        <mrna_strand>AAAAGTAGGG-TTTCTTACAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCATCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTCTCATATGAGCATCTACGGGGACCTCTACATGTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTTAACTTTTGGAAGTGAACTGCTATGTGGACCTAAGAAAGACTAGCTTTTTTAAATTTAATATTTTGTTCTATACATTCCTAATTTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E278084" ref_strand="+" ref_description="SGN-E278084 [cLER-4-E10]">
      <seq>aaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgccttgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtatgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatatgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctataaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125223" stop="127438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125523" g_stop="125636" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="0.912"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="219" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127146" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="439" r_length="220" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E278084" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>434</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E278084" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125523" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127146"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGC-TTT-T--C-TGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAAT</genome_strand>
        <mrna_strand>AAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTATGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATATGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E296926" ref_strand="+" ref_description="SGN-E296926 [cLET-26-M16]">
      <seq>aaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgggtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctataaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125223" stop="127438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125523" g_stop="125636" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="214" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127146" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="434" r_length="220" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E296926" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>434</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E296926" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125523" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127146"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAAT</genome_strand>
        <mrna_strand>AAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E290821" ref_strand="+" ref_description="SGN-E290821 [cLET-10-E20]">
      <seq>aaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctataaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125223" stop="127438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125523" g_stop="125636" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="214" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127146" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="434" r_length="220" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E290821" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>434</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E290821" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125523" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127146"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAAT</genome_strand>
        <mrna_strand>AAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E278847" ref_strand="+" ref_description="SGN-E278847 [cLER-2-F16]">
      <seq>aaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125223" stop="127438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125523" g_stop="125636" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="214" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127145" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="433" r_length="219" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E278847" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E278847" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125523" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127145"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAA</genome_strand>
        <mrna_strand>AAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E286649" ref_strand="+" ref_description="SGN-E286649 [cLES-12-J19]">
      <seq>tagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattgtatattttgttctataaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125228" stop="127438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125528" g_stop="125636" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="109" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="209" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127145" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="428" r_length="219" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E286649" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>428</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E286649" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125528" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127145"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAA</genome_strand>
        <mrna_strand>TAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTGTATATTTTGTTCTATAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E562593" ref_strand="+" ref_description="SGN-E562593 [1033]">
      <seq>ccggctgcagaatcggcacgagggcagaagtagggttttcttacaaacacatcgcgcagcctcgcttttctgccttgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctgctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaagggaaattggcttcattaagtaccgttaaaatcttcaatatgagcttctacgaggacctctacatttggtgctggtagatatatgccattagagctttttgatttgcatctcccttcattaaatgatgtaatgggataattttgatttatgttcaacttttggaagtgaactgctatgtggacctaagaaagactagctttttaaattaatatttgttcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125221" stop="127419"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125528" g_stop="125636" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="143" r_length="113" r_score="0.890"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="244" r_length="101" r_score="0.960"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.92"/>
            <acceptor a_prob="0.993" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127134" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="445" r_length="201" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E562593" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="0.937" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E562593" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125528" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127134"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGC-TTT-T--C-TGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAA-GGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTA</genome_strand>
        <mrna_strand>TAGGGTTTTCTTACAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCT-GCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTTCAATATGAGCTTCTACGAGGACCTCTACATTTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCA-TTAAATGATGTAATGGGATAATTTTGATTTATG-TTCAACTTTTGGAAGTGAACTGCTATGTGGACCTAAGAAAGACTAGCTTTTTA-AATTAATA-TTTGTTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E473095" ref_strand="+" ref_description="SGN-E473095 [cSTB-31-I21]">
      <seq>agggtttcttacaaacacatcgcgcagcctcgcttttctgccttgtgaagatgggtcactctaacatctggaacgctcatccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatctctcatatgagcatctacggggacctctacatgtggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgtttaacttttggaagtgaactgctatgtggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125245" stop="127394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125529" g_stop="125636" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="0.880"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="212" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127094" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="213" r_stop="376" r_length="164" r_score="0.893"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E473095" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>376</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E473095" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125529" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127094"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCT-----GTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAAC</genome_strand>
        <mrna_strand>AGGGT-TTCTTACAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCATCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTCTCATATGAGCATCTACGGGGACCTCTACATGTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTTAACTTTTGGAAGTGAACTGCTATGTGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E214257" ref_strand="+" ref_description="SGN-E214257 [cLEC-77-H13]">
      <seq>gttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagattttcaagttcaacttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125232" stop="127472"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125532" g_stop="125636" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="205" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127179" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="458" r_length="253" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E214257" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>458</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E214257" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125532" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127179"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATAT</genome_strand>
        <mrna_strand>GTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E586966" ref_strand="+" ref_description="SGN-E586966 [75803]">
      <seq>ttacaaacacatcgcgcagcctcgcttttctgccttgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatcttcaatatgagcttctacgaggacctctacatttggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttcaacttttggaagtgaactgctatgtggacctaagaaagactagctttttaaatttaatattttgttctatacattaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125245" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125538" g_stop="125636" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="0.889"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="204" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127140" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="414" r_length="210" r_score="0.921"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127141" i_stop="128297" i_length="1157">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="426" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="131211" i_length="2902">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.738" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="131212" g_stop="131222" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="437" r_length="11" r_score="0.636"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E586966" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>436</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E586966" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125538" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127140"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="131212" e_stop="131222"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCAAACACATCGCGCAGCCTCGC-TTT-T--C-TGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATATGTTGATATCATTTTCTCAACTTTTATATTCGATTAGGAAAAGTAATTGAGAATTTAATCGATTATTTATTCGTGTATATACTATGTTGAGATCATTTTCTCAACTTGTATTTGAATAATGTAATGCAGTATTATGTATGTGTTAGTAAATTTAACGAATCGATCGAAATTATCATTAACTTCTAAACTAAATAAAATGAATGAAATGATTTTAGCCATTATATTATTAAACGATGAAAAACAAGTTGGTGCCAAAATTTAAAATAAAAATGAAAAAATCAAATATTATAACTTGTGGTCCAAGATGTTTCGAAGGTGATTGATATATTTATGTGAAATAGTACAACATCATGTCAATGTACTAATCAATATGTCAATTGATTTAATCATAATTTACAAAATAAATGACATTTTTTTGTATTCAATTATCAATTTAACTTTAGCTTCTCATTTTATTCATTAAATAAATTATAACCACATAAATTTTTCTTATAACTTTTCTTTCTTTAATTATTAAGATTTTTTCAAGTAGATCTCTTTAAATTACAAGTTTCAATATTTTTATTTAAAATTTTTATATTTAATTAAAAAACCTTCGGATAAATTGAGACGAAATGAGTAACAAAATATTTTTCTTAGACAAAATTATGACAAGTAGGACAATTGAGAACCATAGGATAAAATTGATGATTGTGTTCACAATTTATTACCAAATACCAATCACATGTCTCATGTGTGACTTGACATGTTTCATACGGCGTATTTTTATTATTTTTTCTTTTGTTTTCAAACTTAAAATACACAATTTTATCAGATATATCTATTATGATCATTATCTAAAAGGTTAATTTATTATCTTTTCATAATAATTTATTATCTCAATGTTATAGTAACGAAAAAC</genome_strand>
        <mrna_strand>TTACAAACACATCGCGCAGCCTCGCTTTTCTGCCTTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTTCAATATGAGCTTCTACGAGGACCTCTACATTTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTCAACTTTTGGAAGTGAACTGCTATGTGGACCTAAGAAAGACTAGCTTTTTAAATTTAATATTTTGTTCTATACATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E303136" ref_strand="+" ref_description="SGN-E303136 [cLEX-5-C16]">
      <seq>ttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125238" stop="127445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125538" g_stop="125636" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="199" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127144" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="417" r_length="218" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="418" polyA_stop="429"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E303136" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E303136" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125538" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127144"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTA</genome_strand>
        <mrna_strand>TTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E397225" ref_strand="+" ref_description="SGN-E397225 [TUS-45-C19](-)">
      <seq>tgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttttacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125239" stop="127453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125539" g_stop="125636" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="198" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127162" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="434" r_length="236" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E397225" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>434</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E397225" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125539" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127162"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGT</genome_strand>
        <mrna_strand>TGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTTTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E397137" ref_strand="+" ref_description="SGN-E397137 [TUS-45-C19]">
      <seq>tgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125239" stop="127453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125539" g_stop="125636" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="198" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127162" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="434" r_length="236" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E397137" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>434</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E397137" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125539" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127162"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGT</genome_strand>
        <mrna_strand>TGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E397340" ref_strand="+" ref_description="SGN-E397340 [TUS-45-D19](-)">
      <seq>tgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125239" stop="127453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125539" g_stop="125636" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="198" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127162" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="434" r_length="236" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E397340" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>434</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E397340" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125539" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127162"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGT</genome_strand>
        <mrna_strand>TGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E397341" ref_strand="+" ref_description="SGN-E397341 [TUS-45-D19]">
      <seq>tgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaactttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125239" stop="127373"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125539" g_stop="125636" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="198" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127073" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="345" r_length="147" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E397341" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>345</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E397341" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125539" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127073"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTT</genome_strand>
        <mrna_strand>TGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E292886" ref_strand="+" ref_description="SGN-E292886 [cLET-11-H19]">
      <seq>gcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125240" stop="127453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125540" g_stop="125636" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="97" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="197" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127162" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="433" r_length="236" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E292886" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E292886" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125540" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127162"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGT</genome_strand>
        <mrna_strand>GCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E230726" ref_strand="+" ref_description="SGN-E230726 [cLEL-35-A12](-)">
      <seq>acatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctccacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtgcaagacatatggccttagagctttttgctttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtacctgctatgtgaacctaagaaagtctagcttttaaggttcaaaaaaaaaaaaaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125246" stop="127424"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125546" g_stop="125636" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="192" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127116" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="382" r_length="190" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="387" polyA_stop="404"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E230726" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>381</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E230726" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125546" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127116"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCT-CACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAG</genome_strand>
        <mrna_strand>ACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTGCAAGACATATGGCCTTAGAGCTTTTTGCTTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTACCTGCTATGTGAACCTAAGAAAGTCTAGCTTTTAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E215176" ref_strand="+" ref_description="SGN-E215176 [cLEL-20-C4](-)">
      <seq>ggcacgagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagattttcaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125251" stop="127460"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125548" g_stop="125636" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="188" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127160" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="422" r_length="234" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="423" polyA_stop="439"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E215176" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>423</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E215176" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125548" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127160"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAA</genome_strand>
        <mrna_strand>GGCACG-AGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E228932" ref_strand="+" ref_description="SGN-E228932 [cLEL-29-C5](-)">
      <seq>ggccgagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagattttcaaaaaaaaaaaaaaaaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125252" stop="127460"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125550" g_stop="125636" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="87" r_length="87" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="187" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127160" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="421" r_length="234" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="422" polyA_stop="438"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E228932" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E228932" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125550" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127160"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAA</genome_strand>
        <mrna_strand>GGCCGAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E215464" ref_strand="+" ref_description="SGN-E215464 [cLEL-20-C4](-)">
      <seq>gccgaagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagattttcccaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125252" stop="127458"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125550" g_stop="125636" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="87" r_length="87" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="187" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127158" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="419" r_length="232" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="422" polyA_stop="438"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E215464" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>419</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E215464" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125550" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127158"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTC</genome_strand>
        <mrna_strand>GCCGAAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E228836" ref_strand="+" ref_description="SGN-E228836 [cLEL-29-C5](-)">
      <seq>agcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagattttccaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125255" stop="127460"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125555" g_stop="125636" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="82" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="83" r_stop="182" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127160" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="416" r_length="234" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="417" polyA_stop="433"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E228836" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>416</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E228836" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125555" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127160"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAA</genome_strand>
        <mrna_strand>AGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E223004" ref_strand="+" ref_description="SGN-E223004 [cLEL-14-M17](-)">
      <seq>cctcgcttttctgtaaaaatgggtcgctctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125257" stop="127438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125557" g_stop="125636" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="180" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127133" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="387" r_length="207" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="388" polyA_stop="405"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E223004" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>387</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E223004" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125557" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127133"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCT</genome_strand>
        <mrna_strand>CCTCGCTTTTCTGTAAAAATGGGTCGCTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E223378" ref_strand="+" ref_description="SGN-E223378 [cLEL-14-M17](-)">
      <seq>cctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125257" stop="127438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125557" g_stop="125636" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="180" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127133" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="387" r_length="207" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="388" polyA_stop="405"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E223378" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>387</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E223378" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125557" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127133"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCT</genome_strand>
        <mrna_strand>CCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E344490" ref_strand="+" ref_description="SGN-E344490 [cTOF-14-J1]">
      <seq>tcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125259" stop="127445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125559" g_stop="125636" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="178" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127154" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="406" r_length="228" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E344490" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>406</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E344490" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125559" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127154"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGAT</genome_strand>
        <mrna_strand>TCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E230514" ref_strand="+" ref_description="SGN-E230514 [cLEL-35-A12](-)">
      <seq>cgcttttctgtaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagatttaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125260" stop="127424"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125560" g_stop="125636" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="176" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127121" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="371" r_length="195" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="372" polyA_stop="389"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E230514" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>372</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E230514" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125560" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127121"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTT</genome_strand>
        <mrna_strand>CGCTTTTCTGT-AAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E719231" ref_strand="+" ref_description="SGN-E719231 [FC07AG01]">
      <seq>cttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcaaacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaaaaaagactagcttttaagattttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125262" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125562" g_stop="125636" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="175" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127123" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="372" r_length="197" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127124" i_stop="128297" i_length="1174">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="384" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="130574" i_length="2265">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="130575" g_stop="130607" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="385" r_stop="417" r_length="33" r_score="0.727"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E719231" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E719231" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125562" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127123"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="130575" e_stop="130607"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATATGTTGATATCATTTTCTCAACTTTTATATTCGATTAGGAAAAGTAATTGAGAATTTAATCGATTATTTATTCGTGTATATACTATGTTGAGATCATTTTCTCAACTTGTATTTGAATAATGTAATGCAGTATTATGTATGTGTTAGTAAATTTAACGAATCGATCGAAATTATCATTAACTTCTAAACTAAATAAAATGAATGAAATGATTTTAGCCATTATATTATTAAACGATGAAAAACAAGTTGGTGCCAAAATTTAAAATAAAAATGAAAAAATCAAATAT</genome_strand>
        <mrna_strand>CTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAAACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAAAAAGACTAGCTTTTAAGATTTTAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E723764" ref_strand="+" ref_description="SGN-E723764 [FC21DB12]">
      <seq>attttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcaaacagtgcttccgcaccaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaaaacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaacaaagactagcttttaaaattttatattttgttctatacattcctaatttttagattttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125263" stop="127459"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125562" g_stop="125636" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="175" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127159" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="408" r_length="233" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E723764" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>408</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E723764" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125562" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127159"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCA</genome_strand>
        <mrna_strand>ATTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAAACAGTGCTTCCGCACCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAAACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAACAAAGACTAGCTTTTAAAATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E718198" ref_strand="+" ref_description="SGN-E718198 [FC03DH12]">
      <seq>ttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125263" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125563" g_stop="125636" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="174" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127133" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="381" r_length="207" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127134" i_stop="128297" i_length="1164">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="393" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="130302" i_length="1993">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="130303" g_stop="130319" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="410" r_length="17" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E718198" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>410</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E718198" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125563" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127133"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="130303" e_stop="130319"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAA</genome_strand>
        <mrna_strand>TTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355017" ref_strand="+" ref_description="SGN-E355017 [cTOS-19-B14]">
      <seq>ttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctataaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125263" stop="127438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125563" g_stop="125636" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="174" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127142" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="390" r_length="216" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E355017" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>390</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355017" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125563" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127142"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCC</genome_strand>
        <mrna_strand>TTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E586901" ref_strand="+" ref_description="SGN-E586901 [75737]">
      <seq>cctcgtgccgaattcggcacgaggctctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgctgcagacagtgcttccgcagcaatgccaaggaaattggcttcattaagtaccgttaaaatcttcaatatgagcttctacgaggacctctacatttggtgctggtagatatatgccattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttcaacttttggaagtgaactgctatgtggacctaagaaagactagctttttaaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125283" stop="127420"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125584" g_stop="125636" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="78" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="178" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127120" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="368" r_length="190" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E586901" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>347</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E586901" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125584" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127120"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGT-AACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTT</genome_strand>
        <mrna_strand>TCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGCTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATTAAG...................................................................................................................................................................................TACCGTT-AAAATCTTCAATATGAGCTTCTACGAGGACCTCTACATTTGGTGCTGGT---AGATATATGCCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATG-TTCAACTTTTGGAAGTGAACTGCTATGTGGACCTAAGAAAGACTAGCTTTTTAAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E551558" ref_strand="+" ref_description="SGN-E551558 [cTSB-1-B6]">
      <seq>ctacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125313" stop="127453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125613" g_stop="125636" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="124" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127152" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="350" r_length="226" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="351" polyA_stop="361"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E551558" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>350</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E551558" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125613" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127152"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAG</genome_strand>
        <mrna_strand>CTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E222206" ref_strand="+" ref_description="SGN-E222206 [cLEL-16-J6](-)">
      <seq>tggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagattttcaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="126345" stop="127460"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="115" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126927" g_stop="127160" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="349" r_length="234" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="350" polyA_stop="366"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E222206" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>334</cumulative_length_of_scored_exons>
        <coverage percentage="0.913" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E222206" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127160"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAA</genome_strand>
        <mrna_strand>CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E220442" ref_strand="+" ref_description="SGN-E220442 [cLEL-12-D4](-)">
      <seq>ccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtgccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="126345" stop="127453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="118" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126927" g_stop="127152" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="344" r_length="226" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="345" polyA_stop="361"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E220442" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>326</cumulative_length_of_scored_exons>
        <coverage percentage="0.903" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E220442" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127152"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAG</genome_strand>
        <mrna_strand>CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TGCCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E357053" ref_strand="+" ref_description="SGN-E357053 [cTOS-22-K24]">
      <seq>tcatgcaattattagaaagtatggactcatgtgttgcagactttgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagattttcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaanacccgtttattacccacccttattgtgatagcgataatcgaaagagagagagatgcatctatggccatctatgagattaagggattctttcaaattgggttacttgaagaatcttgaatggaatctccataaaatgaacagtcaaaagcaacgtgataacgatcaaaagcttttggatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="126366" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126666" g_stop="126747" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="82" r_length="82" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126927" g_stop="127160" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="83" r_stop="316" r_length="234" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="127161" i_stop="128297" i_length="1137">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="328" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="128310" i_stop="128595" i_length="286">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128596" g_stop="128601" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="334" r_length="6" r_score="0.833"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128602" i_stop="130303" i_length="1702">
            <donor d_prob="0.708" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="130304" g_stop="130326" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="356" r_length="22" r_score="0.739"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="130327" i_stop="130450" i_length="124">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.616" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="130451" g_stop="130456" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="361" r_length="5" r_score="0.833"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="130457" i_stop="131211" i_length="755">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.738" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="131212" g_stop="131235" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="384" r_length="23" r_score="0.625"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="131236" i_stop="132036" i_length="801">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.839" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="132037" g_stop="132043" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="385" r_stop="391" r_length="7" r_score="0.571"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="132044" i_stop="135713" i_length="3670">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.59"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="135714" g_stop="135769" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="447" r_length="56" r_score="0.589"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="135770" i_stop="137332" i_length="1563">
            <donor d_prob="0.900" d_score="0.55"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="137333" g_stop="137412" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="527" r_length="80" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E357053" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357053" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126666" e_stop="126747"/>
          <exon e_start="126927" e_stop="127160"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="128596" e_stop="128601"/>
          <exon e_start="130304" e_stop="130326"/>
          <exon e_start="130451" e_stop="130456"/>
          <exon e_start="131212" e_stop="131235"/>
          <exon e_start="132037" e_stop="132043"/>
          <exon e_start="135714" e_stop="135769"/>
          <exon e_start="137333" e_stop="137412"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATATGTTGATATCATTTTCTCAACTTTTATATTCGATTAGGAAAAGTAATTGAGAATTTAATCGATTATTTATTCGTGTATATACTATGTTGAGATCATTTTCTCAACTTGTATTTGAATAATGTAATGCAGTATTATGTATGTGTTAGTAAATTTAACGAATCGATCGAAATTATCATTAACTTCTAAACTAAATAAAATGAATGAAATGATTTTAGCCATTATATTATTAAACGATGAAAAACAAGTTGGTGCCAAAATTTAAAATAAAAATGAAAAAATCAAATATTATAACTTGTGGTCCAAGATGTTTCGAAGGTGATTGATATATTTATGTGAAATAGTACAACATCATGTCAATGTACTAATCAATATGTCAATTGATTTAATCATAATTTACAAAATAAATGACATTTTTTTGTATTCAATTATCAATTTAACTTTAGCTTCTCATTTTATTCATTAAATAAATTATAACCACATAAATTTTTCTTATAACTTTTCTTTCTTTAATTATTAAGATTTTTTCAAGTAGATCTCTTTAAATTACAAGTTTCAATATTTTTATTTAAAATTTTTATATTTAATTAAAAAACCTTCGGATAAATTGAGACGAAATGAGTAACAAAATATTTTTCTTAGACAAAATTATGACAAGTAGGACAATTGAGAACCATAGGATAAAATTGATGATTGTGTTCACAATTTATTACCAAATACCAATCACATGTCTCATGTGTGACTTGACATGTTTCATACGGCGTATTTTTATTATTTTTTCTTTTGTTTTCAAACTTAAAATACACAATTTTATCAGATATATCTATTATGATCATTATCTAAAAGGTTAATTTATTATCTTTTCATAATAATTTATTATCTCAATGTTATAGTAACGAAAAACATTGAGATAGTCGATATCGTTACAGTCACTCTACATATTTTAACTAATTAAACGTTAGAGTATAATATGAAATTACAAGAATTTAATTTAAAAAAATTGAGAAATCGAAGAATATAAGAATAATTTACATATCATTTTAAAAGCATGTTTTGTTGGTTGAATTATAATTGACAAATAAAAATGATATTCTTTTAAGGGAAAATTGTGTATAATAGCAAACTAATAACCTAAATTAAATGGAATAGCTAGGGTTTGATTTAATTTAATTGTGCTCCATAGCAAACATAAGCTAAAATTTGCCAGCGTCTCTCTCCCAAAAATCTCGCTCGCCACTCTCCATTCTCGCTCGCCTCTCTCGCTTTATACACAGAAGTGTATAATTCTGTTTTTGTTTTGTATAGAGCGAGAGAAAATTGTATATACAATTGCGAATTATACAATTGCAGTGAAATACAATTTTCTCTAGCTTTATACAACAGAAGTGTATACATTGTGTTCCTGTTTTTGTATAAAGCGAGAGAAACATATATCTTCTTGCTATACACTTATAATTAGGCAACATACATACATTTTAATTCAATTCAACTGTATGCAAAACAAATTATACAATTGCAGCGAAATAGGCCAGTGAATTATACAATTATATATGTATAGCAGATTATACAGTTTTATGTGTGCTATGGAGCGCAATTATGTAAAGTTTGTTATACCATACAAATATAAATTTTTCATTTGCTATATGTAAAAGTTGCACTTCTTTTAAAGACGGACTAGTAAGGTAATTTAATTTTTTTTTGTCTCTTATTTTGCAAAGAAAACAGGTCCTTTAATGGGCCAGGGACCGTTGGACTTGTGGATTTGAAGGAGTTTGCTGAGTGGGCTGATTAAGACTAGCCACGTGGGTTGTTGGAATACCTCTTGTCTTCTAGTGAACCCCATATGCCAAATTATTGTTGTCAACGTGGCCATCAATATGGGACCCACACATTTTATGCTACCATACCCCACCCCCCACCCCCACCACCCTACCCCATGTAGAAAAGCTACTATCATGCATCATCATCATGATACATAATGATGTTGGATGTGATATATGGGTATTTTCACGACGTAATATATAAACGTGTTCTTTCATTTCATCTCAGCTGGTATCTATGTCTTTTAACTTTGTGTGTAGACAAGTAAACATGCTTTTAAAGTAATAAGAAAAATTATTCTTATGTGGCAAAATACAAATCAGTTTGAGTGTATATCATCTTCGTGATACATGATGATGAAGATTGTGATACGTGGGTATTTTCACGATATTATATATAAACGTGTTTTTTAATTTCATCTCAACTGGTATCTATGTCTTTCAGCTTTGGATAGGTAAAATTAAATACTCAAACTTATGTTATATAATCTATGTAGCATAATTTCGAAATAATATAATGTATATCACGTAATGTATATAACTTTATATAAATTTTTAAATATTATTTTATACATAACTAAAATAAAAGAATATAGATATCAGTTAAAGTCGATGTATGATATAATTTCTTTTTATTTTTATTTTTTTGTATGGATTTAGAAGACTTGGAGATTGACCCACATTATCTTCTTTAAATTAGCTTTATTTTGTGGTTCAATCAAACTTGGTTGCTATATTGGTTGTCCCTTTTTGTATTTTTGTTCTTTTGTTCCATAGGAGTTGGATCTAACTAATACAAATCAATTTTTAACATAAATTATGCAATTATTTAAGGCTCAAATAAAATATTACCACTAAACTTTCTCTTTCGTAAAAGTCATTTCACCAAAAAGTTCTATATAATATTACCTTTTTTAACCCAAAAAAGGCAATTAGTGACCTTAAAAATTAAGTTTAATTCGGATTAGGAAATTGTCATCATCTTTTGGTAATTTATTATATAAAAATAATGGCTTAATGGTCAAAATTCATAACTTAAATGACACGTATCATAAAATATTTTTAGGCTTATATTATTATAATAATAATAATATTATGTTTCTTTCTCTTTCGTAGTAGTCATTTTACAAAAAAAGCTATATATTATATTTTTCTTTTTACCAAAAAGAGCAGTTAATAATAATTAATTTAGAAAAATGAAGACTTGTTTGCCAAACGATAAAAGTTCTTTTTAATCTTATTTGGATTATAAATCGTCACCTCCTAATTATTTTATTCTATAATACTTTTAGGATATGATTCAATATATTAAAAACCCATCACTTGAATAACACGTATCATCAATTATTTCAGGCACAAATGATAATAATATCTTTTTTTCTTTTTAGTGAAAGTCATTTTTACCTTAAAAAAAACAGTTATTAATCAAGAAAAAATATTAAAATTATTGCTTCCTTTTAAAACAATAAAATTGTTATAAATACACCGTATTGAATATATCAGTATTTACTAAATCAGCTTATAATTAAGTACGTAGTAAAATTACACAACTGAGTTCTAAAGAGGATAAATATTAAATAAATTTTATCATTGCTTTATGGAGATAGATAGACTACTTCGAAAGATTCTCTACTTACGTCCAACACCAACATACAAATTCTAAAAAGTGACTTTTGCAATCAAATAAGTAGCTTAAACAAACCGCATCTNNTCATTTTCGATAAATTTTGAGCTGTTATTAATAATATAACGTTCCTTATTTTATATTTAACAAAAAGTAAAATGAAAAAAAAATATATAAAAGTTGTAATATATAATGGACCAATCATAATACAACAGGTATATAATCAATTAAAAGAACATTTATGGGGTTCTCTTTTCTATAGTGCTCCATACTAAAAATTCCAATGTAACATATACATTATAACTATAAAGGTGATGTTGCAACTAATAAGAAAACATATCTAACAGAGGCAAATTCAGTATTTAAAGATTAATGAGACAGTTATTATTTTAATATATGTCTAAGCAAAACTTCTAATAATGATTAAGAAGTAATATCGTGTGATATGTGTTAAATATAAGTGCTATAATACGATTGAATTATGCATCACAGAAAATATCTTCAAACTATATACACAATATTTTTTGAAACAAATATACGTGCGCCCTCGCTTATATATATATGTTGGGAAATTTATTTTATTTTTTATTGAAAAAATTATTTTAAAAAAGAGAGTTTTATTCTTTTTGTTGAAGAAAATTAGTTGTAATTAACACACAGCAAAACTGAGCTGGAAGGTCAAAATTGCTTAGAAATAAATTAAGACAGGGTGGAAAAAAGAATATTTACCTAAAAAGAATGATTGAAGTGGTTTACATTACTCGATAAAGAATCTGATTATGTTCGAATCATATAATATAATAATAATAACAGGTGTAATATTTTTATTTATTTAATTATAATGTATAAGATTTGTATTATATACTCAATCATTGACAAGTTGAAAGTATTTAATTTTTCTTCTTCTCCACATAATAACACCAAACATATCATGAGGACTCCTGAAGATCCCCATAATATGCGGATCAAACATTTATATAATAAAATGAGATAAGACGCATAAAAAATTAAATAAAAATATAAGTTACTGTCATCAAAATATATTGTTACGATTACGATTATCACTATCAATTATCATTACAATAATCAACTGCACAATTAATATATCACTGAATCACTATAATTATTCACCATTAACATATTTATGTATCTATCACTATGAATAACCATTGTTAGTGACTAATATCAACCAACATTACCATTAATTACTATCGAACAGTTAACGTCAATCAATACTATTCTCAATCGACGTCTACGAATCATCAATATATTGTCATAGTTTTTTTAAAAAAATATGTATTTATACAAACATATAGTATCAAACTAATTTAGTATTTTATTTAAATATTATATTTATTATTATTATTAAATATATATTCAAACATGAAAAATAAATAATTCCAATTATTTAAATATAAATCTTAATAATCAGAGAATTTAAACATCTAAATCTCTATATGTATTTTAATTAAGTTAGAAGCTTAATCTTTAACAAACAAAACTAGGTCTTAAATAATCTTGAAGTTAAAGTATCATAATGGCCTCTATACGAAGCTTATTTATGTTAATTGCTAGTCACCTATATATAACGCAAAAAATAAGTCACCCTGCTATTTTTTTGGTTTTTAAGAAAATGATATACAATTTCTTTTAGTCAGTTTCGAAAAAAAAGATCTTTTTTTTTATAGCGATATTTTAATTTCAACTTTCATATGACATATATCTAAGATCACAATATTAAAAAATATTTTGATATATTTGACATAACTATAATTTAGAATCATTGAATCAAATTTTTTTTATTTTTTTTAAAAAATTTCATATCAAAACTCAATAATTCTATTTTAAACAAATGAAGTAAGCTTGCTAATTTTTTTAATACCAATTTGTCTAGCAGTTCATTGGCTTACATTTGCGTGACTGTATTGCCAATGGTTCTTTTTTTTTTTTTAAAGAAAAATAAAATACATAAGTAATCA-GTATGAGTTTATGGGTTTTATTTATTTTATATTCTTGGTAGAGTATGTATGAGTTTATGATTCTTATCTATATATAAAAATATAATAATTTCCCATGGATTCTGCTTGATATTCGGAAAATAACTGATTAAACTATGAGATTTTTTCTATTTATATACTATATATATATATATATATATATATATATATATATGGAGTTAACATTTATAGGCATATGACAATTATTATAATTAAAGCCTTTAAATGTCTAGTGTTTCTATTAGGGCTGTGTATCGGTTGGTTCAGTTTGGTTTTAAAGTTTAACGGGTTGGCTTATTGATTATCGGTTTGTAGAGATGCTAAACCGTTATAGAACCATTAAGATATTGGCTTATCGGTTATTGATTTTTCGGTTTTTGATCTTTATCGGTTCGGTTATCGATTTAACCATTAAGATTTGACACAAAAGAAAAAACATTGAAAATCACTTAGAAACAAGGTGACAAACCAAATAAACCACGCACTTGAGTTCACAAGTTACATCTTGCTCAAAAGCAAACACTTTTACATTGTAGAATAATCAAGTGTTTGAGATAATAAAAAATAAAAGTAGGAAATTAAACTCCTAGTCGAGGACTTTATATGCAAAATGATATAAATATAATTATTTTAATTTACTATCGGGTTGTCAGTTAACCCATTAAGAAAAAACTTTAAACCGTTAAGAACCAATAACCCGATAACAAAAAAAATCAAAATTGTTATCAAAACCACTAATCCAATAACCCAATACTACAAATCAATAACTTTTTTATCGGTTCGGCTTATCGGTTTCGGTTCGATTTTGAACGGCCCTAGTTTAAACCGTTAAGAACCAATAACCCGATAACAAAAAAAATCAAAACTGTTATCAAAACCACTAATCCAATAACCCAATACTAGAAATCAATAACTTTTTTATCGGTTCGACTTATCGATTTCGGTTCGATTTTGAACGGCCCTAGTTTACATTGGTAGAGCTAAATTTTGTTTGAGGTAAGTTAAATTAATATCGATCAAAAAATTATACTATATATTATTTTTCAAAATATATATCAAAATTTCTTGATTTTTTCCTTGCGTTTTATTTTTTAAAGAAATGGAGGGAGACTAGTGCAAAGACATGCAAAATATTGTCCTAGAGAAAATGGATATAATCTCATGAAATATGAAGCTATGTGGATTAAAATGCTGAATAATCTTTATATATGAATAAAAAGAGAAATTATTAATTATTCTGTTTTCTTAATAAACAAATCCAAGTCTTATCTTAAACTAGACAGGATACAGTCACCATTAATTAAGTTGCTTACAATAGGGGCATCAGAAAAAAAAAGGGCAAAATTGTATATAATCACTCATTTTGATTAAATATATGTGGTTGAAATTTTTCATTCTCGTATACATTAATATATTCAGCGAAATTTTACAAATAAAGTCTGAAAGGTAAAATATATGTATCCCTTATTCATACAACGTAGAAATAAAAGAGACTATTTCTTAAAGATTCTTCGCGCAAATACAAAAATTAAACATTCTAATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGG</genome_strand>
        <mrna_strand>TCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACTTTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA..............................................................................................................................................................................................................................................................................................AAAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAANA-CCCG............................................................................................................................T-TTAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCCACCCTTATTGTGATAG-CG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAGAGA-GAGATGCATCTATGGCCATCTATGAGATTAAGGGATTCTTTCAAATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTTACTTGAAGAATCTTGAATGGAATCTCCATAAAATGAACAGTCAAAAGCAACGTGATAACGATCAAAAGCTTTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E354244" ref_strand="+" ref_description="SGN-E354244 [cTOS-16-O16]">
      <seq>tcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctatacattcctaatttttagattttcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaccgataaatacccacccttattgtgatagcgataatcgaaagagagagagatgcatctatggccatctatgagattaagggattctttcaaattgggttacttgaagaatcttgaatggaatctccatagaatgaacagtcagaagcaacgtgataacgatcagaagcttttggatgagccaaccaccagttctaataacggtactagagaaaaatttgagctgttttgtagagaattcctcatgatcctttcttgctgctactgttgtttctgctggggagcttgtgttgctgatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="126366" stop="153947"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126666" g_stop="126747" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="82" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126927" g_stop="127160" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="83" r_stop="316" r_length="234" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="127161" i_stop="127954" i_length="794">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="127955" g_stop="127969" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="331" r_length="15" r_score="0.867"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127970" i_stop="128297" i_length="328">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="343" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="128529" i_length="220">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="128530" g_stop="128556" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="370" r_length="27" r_score="0.667"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="128557" i_stop="128694" i_length="138">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="128695" g_stop="128718" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="394" r_length="24" r_score="0.708"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="128719" i_stop="129501" i_length="783">
            <donor d_prob="0.424" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.58"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="129502" g_stop="129570" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="462" r_length="68" r_score="0.551"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="129571" i_stop="130258" i_length="688">
            <donor d_prob="0.900" d_score="0.55"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="130259" g_stop="130286" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="463" r_stop="489" r_length="27" r_score="0.536"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="130287" i_stop="131211" i_length="925">
            <donor d_prob="0.901" d_score="0.00"/>
            <acceptor a_prob="0.738" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="131212" g_stop="131235" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="512" r_length="23" r_score="0.542"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="131236" i_stop="132036" i_length="801">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.839" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="132037" g_stop="132065" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="513" r_stop="541" r_length="29" r_score="0.552"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="132066" i_stop="137293" i_length="5228">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.62"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="137294" g_stop="137403" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="542" r_stop="651" r_length="110" r_score="0.615"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E354244" ref_strand="+">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354244" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126666" e_stop="126747"/>
          <exon e_start="126927" e_stop="127160"/>
          <exon e_start="127955" e_stop="127969"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="128530" e_stop="128556"/>
          <exon e_start="128695" e_stop="128718"/>
          <exon e_start="129502" e_stop="129570"/>
          <exon e_start="130259" e_stop="130286"/>
          <exon e_start="131212" e_stop="131235"/>
          <exon e_start="132037" e_stop="132065"/>
          <exon e_start="137294" e_stop="137403"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACA-GCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATATGTTGATATCATTTTCTCAACTTTTATATTCGATTAGGAAAAGTAATTGAGAATTTAATCGATTATTTATTCGTGTATATACTATGTTGAGATCATTTTCTCAACTTGTATTTGAATAATGTAATGCAGTATTATGTATGTGTTAGTAAATTTAACGAATCGATCGAAATTATCATTAACTTCTAAACTAAATAAAATGAATGAAATGATTTTAGCCATTATATTATTAAACGATGAAAAACAAGTTGGTGCCAAAATTTAAAATAAAAATGAAAAAATCAAATATTATAACTTGTGGTCCAAGATGTTTCGAAGGTGATTGATATATTTATGTGAAATAGTACAACATCATGTCAATGTACTAATCAATATGTCAATTGATTTAATCATAATTTACAAAATAAATGACATTTTTTTGTATTCAATTATCAATTTAACTTTAGCTTCTCATTTTATTCATTAAATAAATTATAACCACATAAATTTTTCTTATAACTTTTCTTTCTTTAATTATTAAGATTTTTTCAAGTAGATCTCTTTAAATTACAAGTTTCAATATTTTTATTTAAAATTTTTATATTTAATTAAAAAACCTTCGGATAAATTGAGACGAAATGAGTAACAAAATATTTTTCTTAGACAAAATTATGACAAGTAGGACAATTGAGAACCATAGGATAAAATTGATGATTGTGTTCACAATTTATTACCAAATACCAATCACATGTCTCATGTGTGACTTGACATGTTTCATACGGCGTATTTTTATTATTTTTTCTTTTGTTTTCAAACTTAAAATACACAATTTTATCAGATATATCTATTATGATCATTATCTAAAAGGTTAATTTATTATCTTTTCATAATAATTTATTATCTCAATGTTATAGTAACGAAAAACATTGAGATAGTCGATATCGTTACAGTCACTCTACATATTTTAACTAATTAAACGTTAGAGTATAATATGAAATTACAAGAATTTAATTTAAAAAAATTGAGAAATCGAAGAATATAAGAATAATTTACATATCATTTTAAAAGCATGTTTTGTTGGTTGAATTATAATTGACAAATAAAAATGATATTCTTTTAAGGGAAAATTGTGTATAATAGCAAACTAATAACCTAAATTAAATGGAATAGCTAGGGTTTGATTTAATTTAATTGTGCTCCATAGCAAACATAAGCTAAAATTTGCCAGCGTCTCTCTCCCAAAAATCTCGCTCGCCACTCTCCATTCTCGCTCGCCTCTCTCGCTTTATACACAGAAGTGTATAATTCTGTTTTTGTTTTGTATAGAGCGAGAGAAAATTGTATATACAATTGCGAATTATACAATTGCAGTGAAATACAATTTTCTCTAGCTTTATACAACAGAAGTGTATACATTGTGTTCCTGTTTTTGTATAAAGCGAGAGAAACATATATCTTCTTGCTATACACTTATAATTAGGCAACATACATACATTTTAATTCAATTCAACTGTATGCAAAACAAATTATACAATTGCAGCGAAATAGGCCAGTGAATTATACAATTATATATGTATAGCAGATTATACAGTTTTATGTGTGCTATGGAGCGCAATTATGTAAAGTTTGTTATACCATACAAATATAAATTTTTCATTTGCTATATGTAAAAGTTGCACTTCTTTTAAAGACGGACTAGTAAGGTAATTTAATTTTTTTTTGTCTCTTATTTTGCAAAGAAAACAGGTCCTTTAATGGGCCAGGGACCGTTGGACTTGTGGATTTGAAGGAGTTTGCTGAGTGGGCTGATTAAGACTAGCCACGTGGGTTGTTGGAATACCTCTTGTCTTCTAGTGAACCCCATATGCCAAATTATTGTTGTCAACGTGGCCATCAATATGGGACCCACACATTTTATGCTACCATACCCCACCCCCCACCCCCACCACCCTACCCCATGTAGAAAAGCTACTATCATGCATCATCATCATGATACATAATGATGTTGGATGTGATATATGGGTATTTTCACGACGTAATATATAAACGTGTTCTTTCATTTCATCTCAGCTGGTATCTATGTCTTTTAACTTTGTGTGTAGACAAGTAAACATGCTTTTAAAGTAATAAGAAAAATTATTCTTATGTGGCAAAATACAAATCAGTTTGAGTGTATATCATCTTCGTGATACATGATGATGAAGATTGTGATACGTGGGTATTTTCACGATATTATATATAAACGTGTTTTTTAATTTCATCTCAACTGGTATCTATGTCTTTCAGCTTTGGATAGGTAAAATTAAATACTCAAACTTATGTTATATAATCTATGTAGCATAATTTCGAAATAATATAATGTATATCACGTAATGTATATAACTTTATATAAATTTTTAAATATTATTTTATACATAACTAAAATAAAAGAATATAGATATCAGTTAAAGTCGATGTATGATATAATTTCTTTTTATTTTTATTTTTTTGTATGGATTTAGAAGACTTGGAGATTGACCCACATTATCTTCTTTAAATTAGCTTTATTTTGTGGTTCAATCAAACTTGGTTGCTATATTGGTTGTCCCTTTTTGTATTTTTGTTCTTTTGTTCCATAGGAGTTGGATCTAACTAATACAAATCAATTTTTAACATAAATTATGCAATTATTTAAGGCTCAAATAAAATATTACCACTAAACTTTCTCTTTCGTAAAAGTCATTTCACCAAAAAGTTCTATATAATATTACCTTTTTTAACCCAAAAAAGGCAATTAGTGACCTTAAAAATTAAGTTTAATTCGGATTAGGAAATTGTCATCATCTTTTGGTAATTTATTATATAAAAATAATGGCTTAATGGTCAAAATTCATAACTTAAATGACACGTATCATAAAATATTTTTAGGCTTATATTATTATAATAATAATAATATTATGTTTCTTTCTCTTTCGTAGTAGTCATTTTACAAAAAAAGCTATATATTATATTTTTCTTTTTACCAAAAAGAGCAGTTAATAATAATTAATTTAGAAAAATGAAGACTTGTTTGCCAAACGATAAAAGTTCTTTTTAATCTTATTTGGATTATAAATCGTCACCTCCTAATTATTTTATTCTATAATACTTTTAGGATATGATTCAATATATTAAAAACCCATCACTTGAATAACACGTATCATCAATTATTTCAGGCACAAATGATAATAATATCTTTTTTTCTTTTTAGTGAAAGTCATTTTTACCTTAAAAAAAACAGTTATTAATCAAGAAAAAATATTAAAATTATTGCTTCCTTTTAAAACAATAAAATTGTTATAAATACACCGTATTGAATATATCAGTATTTACTAAATCAGCTTATAATTAAGTACGTAGTAAAATTACACAACTGAGTTCTAAAGAGGATAAATATTAAATAAATTTTATCATTGCTTTATGGAGATAGATAGACTACTTCGAAAGATTCTCTACTTACGTCCAACACCAACATACAAATTCTAAAAAGTGACTTTTGCAATCAAATAAGTAGCTTAAACAAACCGCATCTNNTCATTTTCGATAAATTTTGAGCTGTTATTAATAATATAACGTTCCTTATTTTATATTTAACAAAAAGTAAAATGAAAAAAAAATATATAAAAGTTGTAATATATAATGGACCAATCATAATACAACAGGTATATAATCAATTAAAAGAACATTTATGGGGTTCTCTTTTCTATAGTGCTCCATACTAAAAATTCCAATGTAACATATACATTATAACTATAAAGGTGATGTTGCAACTAATAAGAAAACATATCTAACAGAGGCAAATTCAGTATTTAAAGATTAATGAGACAGTTATTATTTTAATATATGTCTAAGCAAAACTTCTAATAATGATTAAGAAGTAATATCGTGTGATATGTGTTAAATATAAGTGCTATAATACGATTGAATTATGCATCACAGAAAATATCTTCAAACTATATACACAATATTTTTTGAAACAAATATACGTGCGCCCTCGCTTATATATATATGTTGGGAAATTTATTTTATTTTTTATTGAAAAAATTATTTTAAAAAAGAGAGTTTTATTCTTTTTGTTGAAGAAAATTAGTTGTAATTAACACACAGCAAAACTGAGCTGGAAGGTCAAAATTGCTTAGAAATAAATTAAGACAGGGTGGAAAAAAGAATATTTACCTAAAAAGAATGATTGAAGTGGTTTACATTACTCGATAAAGAATCTGATTATGTTCGAATCATATAATATAATAATAATAACAGGTGTAATATTTTTATTTATTTAATTATAATGTATAAGATTTGTATTATATACTCAATCATTGACAAGTTGAAAGTATTTAATTTTTCTTCTTCTCCACATAATAACACCAAACATATCATGAGGACTCCTGAAGATCCCCATAATATGCGGATCAAACATTTATATAATAAAATGAGATAAGACGCATAAAAAATTAAATAAAAATATAAGTTACTGTCATCAAAATATATTGTTACGATTACGATTATCACTATCAATTATCATTACAATAATCAACTGCACAATTAATATATCACTGAATCACTATAATTATTCACCATTAACATATTTATGTATCTATCACTATGAATAACCATTGTTAGTGACTAATATCAACCAACATTACCATTAATTACTATCGAACAGTTAACGTCAATCAATACTATTCTCAATCGACGTCTACGAATCATCAATATATTGTCATAGTTTTTTTAAAAAAATATGTATTTATACAAACATATAGTATCAAACTAATTTAGTATTTTATTTAAATATTATATTTATTATTATTATTAAATATATATTCAAACATGAAAAATAAATAATTCCAATTATTTAAATATAAATCTTAATAATCAGAGAATTTAAACATCTAAATCTCTATATGTATTTTAATTAAGTTAGAAGCTTAATCTTTAACAAACAAAACTAGGTCTTAAATAATCTTGAAGTTAAAGTATCATAATGGCCTCTATACGAAGCTTATTTATGTTAATTGCTAGTCACCTATATATAACGCAAAAAATAAGTCACCCTGCTATTTTTTTGGTTTTTAAGAAAATGATATACAATTTCTTTTAGTCAGTTTCGAAAAAAAAGATCTTTTTTTTTATAGCGATATTTTAATTTCAACTTTCATATGACATATATCTAAGATCACAATATTAAAAAATATTTTGATATATTTGACATAACTATAATTTAGAATCATTGAATCAAATTTTTTTTATTTTTTTTAAAAAATTTCATATCAAAACTCAATAATTCTATTTTAAACAAATGAAGTAAGCTTGCTAATTTTTTTAATACCAATTTGTCTAGCAGTTCATTGGCTTACATTTGCGTGACTGTATTGCCAATGGTTCTTTTTTTTTTTTTAAAGAAAAATAAAATACATAAGTAATCAGTATGAGTTTATGGGTTTTATTTATTTTATATTCTTGGTAGAGTATGTATGAGTTTATGATTCTTATCTATATATAAAAATATAATAATTTCCCATGGATTCTGCTTGATATTCGGAAAATAACTGATTAAACTATGAGATTTTTTCTATTTATATACTATATATATATATATATATATATATATATATATATGGAGTTAACATTTATAGGCATATGACAATTATTATAATTAAAGCCTTTAAATGTCTAGTGTTTCTATTAGGGCTGTGTATCGGTTGGTTCAGTTTGGTTTTAAAGTTTAACGGGTTGGCTTATTGATTATCGGTTTGTAGAGATGCTAAACCGTTATAGAACCATTAAGATATTGGCTTATCGGTTATTGATTTTTCGGTTTTTGATCTTTATCGGTTCGGTTATCGATTTAACCATTAAGATTTGACACAAAAGAAAAAACATTGAAAATCACTTAGAAACAAGGTGACAAACCAAATAAACCACGCACTTGAGTTCACAAGTTACATCTTGCTCAAAAGCAAACACTTTTACATTGTAGAATAATCAAGTGTTTGAGATAATAAAAAATAAAAGTAGGAAATTAAACTCCTAGTCGAGGACTTTATATGCAAAATGATATAAATATAATTATTTTAATTTACTATCGGGTTGTCAGTTAACCCATTAAGAAAAAACTTTAAACCGTTAAGAACCAATAACCCGATAACAAAAAAAATCAAAATTGTTATCAAAACCACTAATCCAATAACCCAATACTACAAATCAATAACTTTTTTATCGGTTCGGCTTATCGGTTTCGGTTCGATTTTGAACGGCCCTAGTTTAAACCGTTAAGAACCAATAACCCGATAACAAAAAAAATCAAAACTGTTATCAAAACCACTAATCCAATAACCCAATACTAGAAATCAATAACTTTTTTATCGGTTCGACTTATCGATTTCGGTTCGATTTTGAACGGCCCTAGTTTACATTGGTAGAGCTAAATTTTGTTTGAGGTAAGTTAAATTAATATCGATCAAAAAATTATACTATATATTATTTTTCAAAATATATATCAAAATTTCTTGATTTTTTCCTTGCGTTTTATTTTTTAAAGAAATGGAGGGAGACTAGTGCAAAGACATGCAAAATATTGTCCTAGAGAAAATGGATATAATCTCATGAAATATGAAGCTATGTGGATTAAAATGCTGAATAATCTTTATATATGAATAAAAAGAGAAATTATTAATTATTCTGTTTTCTTAATAAACAAATCCAAGTCTTATCTTAAACTAGACAGGATACAGTCACCATTAATTAAGTTGCTTACAATAGGGGCATCAGAAAAAAAAAGGGCAAAATTGTATATAATCACTCATTTTGATTAAATATATGTGGTTGAAATTTTTCATTCTCGTATACATTAATATATTCAGCGAAATTTTACAAATAAAGTCTGAAAGGTAAAATATATGTATCCCTTATTCATACAACGTAGAAATAAAAGAGACTATTTCTTAAAGATTCTTCGCGCAAATACAAAAATTAAACA-TTCTAATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</genome_strand>
        <mrna_strand>TCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAA........................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA............................................................................................................................................................................................................................AAAAAAAAAACCGATAAATACCCACCC..........................................................................................................................................TTATTGTGATAGCGATAATCGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAG-AGAGATGCATCTATGGCCATCTATGAGATTAAGGGATT-CTTTCAAATTGGGTTACTTGAAGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGAATG-GAATCTCCATAGAATGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCAGAAGCAACGTGATA-ACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGAAGCTTTTGGATGAGCCAACCACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCTAATA-ACGGTACTAGAGAAAAATTTGAGCTGTTTTGTAGAGAATTCCTCATGATCCTTTCTTGCTGCTACTGTTGTTTCTGCTGGGGAGCTTGTGTTGCTGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E219664" ref_strand="+" ref_description="SGN-E219664 [cLEL-11-N14](-)">
      <seq>aagtatggactcatgtgttgcaaacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacaaggacctctacatttggggctggtagaagacatatggcattagagctttttgatttgcatcccccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagatttttaaaaaaaaaaaaaaaaaaaaaaaaacaaacaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="126382" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126682" g_stop="126747" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126927" g_stop="127121" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="261" r_length="195" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="127122" i_stop="128022" i_length="901">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.66"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="128023" g_stop="128069" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="308" r_length="47" r_score="0.660"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E219664" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>308</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E219664" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126682" e_stop="126747"/>
          <exon e_start="126927" e_stop="127121"/>
          <exon e_start="128023" e_stop="128069"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAAT</genome_strand>
        <mrna_strand>AAGTATGGACTCATGTGTTGCAAACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACAAGGACCTCTACATTTGGGGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCCCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAAAAAAAAAAAAAAAAAAAAAACAAACAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E744465" ref_strand="+" ref_description="SGN-E744465 [GI|399606]">
      <seq>aaggaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="126427" stop="127416"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126727" g_stop="126747" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="20" r_length="20" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="0.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126927" g_stop="127116" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="210" r_length="190" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E744465" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>211</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E744465" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126727" e_stop="126747"/>
          <exon e_start="126927" e_stop="127116"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAG</genome_strand>
        <mrna_strand>AAGGA-ATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E340814" ref_strand="+" ref_description="SGN-E340814 [cTOF-5-D19]">
      <seq>tacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttatattttgttctataaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="126656" stop="127438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126956" g_stop="127146" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="191" r_length="191" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E340814" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>191</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E340814" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126956" e_stop="127146"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAAT</genome_strand>
        <mrna_strand>TACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E232888" ref_strand="+" ref_description="SGN-E232888 [cLED-8-O12]">
      <seq>tcctatacaatttattttttcagaatgcccatttggagtttgtagaagttttgaatgtgaaagaacaagttgattctggaatgatgtactatataacacttgtggcaactgatgatggaaataaaaaagattatgaagccaagatttgggtgaaggaatgggaggacttcaagaaagttataagcttcaagcttgttggtaaggatagtgcaataattgggggctttaccgatgttccattcccaaacaaacgcgagttccaagatcttacacgttttgctattcaggattataataagaaagaggttatttacaatgacttactcatcttctattttttcctgttaattacatattcaaatttataatatattaattttgaacccattgcatgagatatctaataatcatttcatgtgaatgaacgtcatatacaatttatttttcagaatgcccatttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="152597" stop="153658"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="152897" g_stop="153358" g_length="462"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="462" r_length="462" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E232888" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>462</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E232888" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="152897" e_stop="153358"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTATACAATTTATTTTTTCAGAATGCCCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAAGAACAAGTTGTTTCTGGAATGATGTACTATATAACACTTGTGGCAACTGATGATGGAAATAAAAAAGATTATGAAGCCAAGATTTGGGTGAAGGAATGGGAGGACTTCAAGAAAGTTATAAGCTTCAAGCTTGTTGGTAAGGATAGTGCAATAATTGGGGGCTTTACCGATGTTCCATTCCCAAACAAACGCGAGTTCCAAGATCTTACACGTTTTGCTATTCAGGATTATAATAAGAAAGAGGTTATTTACAATGACTTACTCATCTTCTATTTTTTCCTGTTAATTTCATATTCAAATTTATAATATTTTAATTTTGAACCCATTGCATGAGATATCTAATAATTATTTCATTTGAATGAACGTCATATACAATTTATTTTTCAGAATGCCCATTTGG</genome_strand>
        <mrna_strand>TCCTATACAATTTATTTTTTCAGAATGCCCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAAGAACAAGTTGATTCTGGAATGATGTACTATATAACACTTGTGGCAACTGATGATGGAAATAAAAAAGATTATGAAGCCAAGATTTGGGTGAAGGAATGGGAGGACTTCAAGAAAGTTATAAGCTTCAAGCTTGTTGGTAAGGATAGTGCAATAATTGGGGGCTTTACCGATGTTCCATTCCCAAACAAACGCGAGTTCCAAGATCTTACACGTTTTGCTATTCAGGATTATAATAAGAAAGAGGTTATTTACAATGACTTACTCATCTTCTATTTTTTCCTGTTAATTACATATTCAAATTTATAATATATTAATTTTGAACCCATTGCATGAGATATCTAATAATCATTTCATGTGAATGAACGTCATATACAATTTATTTTTCAGAATGCCCATTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E239896" ref_strand="+" ref_description="SGN-E239896 [cLED-29-A17]">
      <seq>tcctatacaatttattttttcagaatgcccatttggagtttgtagaagttttgaatgtgaaagaacaagttgtttctggaatgatgtactatataacacttgtggcaactgatgatggaaataaaaaagattatgaagccaagatttgggtgaaggaatgggaggacttcaagaaagttataagcttcaagcttgttggtaaggatagtgcaataattgggggctttaccgatgttccattcccaaacaaacgcgagttccaagatcttacacgttttgctattcaggattataataagaaagaggttatttacaatgacttactcatcttctattttttcctgttaatttcatattcaaatttataatattttaattttgaacccattgcatgagatatctaataattatttcatttgaatgaacgtcatatacaatttatttttcagaatgcccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="152597" stop="153654"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="152897" g_stop="153354" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="458" r_length="458" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E239896" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>458</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E239896" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="152897" e_stop="153354"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTATACAATTTATTTTTTCAGAATGCCCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAAGAACAAGTTGTTTCTGGAATGATGTACTATATAACACTTGTGGCAACTGATGATGGAAATAAAAAAGATTATGAAGCCAAGATTTGGGTGAAGGAATGGGAGGACTTCAAGAAAGTTATAAGCTTCAAGCTTGTTGGTAAGGATAGTGCAATAATTGGGGGCTTTACCGATGTTCCATTCCCAAACAAACGCGAGTTCCAAGATCTTACACGTTTTGCTATTCAGGATTATAATAAGAAAGAGGTTATTTACAATGACTTACTCATCTTCTATTTTTTCCTGTTAATTTCATATTCAAATTTATAATATTTTAATTTTGAACCCATTGCATGAGATATCTAATAATTATTTCATTTGAATGAACGTCATATACAATTTATTTTTCAGAATGCCCAT</genome_strand>
        <mrna_strand>TCCTATACAATTTATTTTTTCAGAATGCCCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAAGAACAAGTTGTTTCTGGAATGATGTACTATATAACACTTGTGGCAACTGATGATGGAAATAAAAAAGATTATGAAGCCAAGATTTGGGTGAAGGAATGGGAGGACTTCAAGAAAGTTATAAGCTTCAAGCTTGTTGGTAAGGATAGTGCAATAATTGGGGGCTTTACCGATGTTCCATTCCCAAACAAACGCGAGTTCCAAGATCTTACACGTTTTGCTATTCAGGATTATAATAAGAAAGAGGTTATTTACAATGACTTACTCATCTTCTATTTTTTCCTGTTAATTTCATATTCAAATTTATAATATTTTAATTTTGAACCCATTGCATGAGATATCTAATAATTATTTCATTTGAATGAACGTCATATACAATTTATTTTTCAGAATGCCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E231111" ref_strand="+" ref_description="SGN-E231111 [cLED-5-N8]">
      <seq>tcctatacaatttattttttcagaatgcccatttggagtttgtagaagttttgaatgtgaaagaacaagttgtttctggaatgatgtactatataacacttgtggcaactgatgatggaaataaaaaagattatgaagccaagatttgggtgaaggaatgggaggacttcaagaaagttataagcttcaagcttgttggtaaggatagtgcaataattgggggctttaccgatgttccattcccaaacaaacgcgagttccaagatcttacacgttttgctattcaggattataataagaaagaggttatttacaatgacttactcatcttctatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="152597" stop="153534"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="152897" g_stop="153234" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="338" r_length="338" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-E231111" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>338</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E231111" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="152897" e_stop="153234"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTATACAATTTATTTTTTCAGAATGCCCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAAGAACAAGTTGTTTCTGGAATGATGTACTATATAACACTTGTGGCAACTGATGATGGAAATAAAAAAGATTATGAAGCCAAGATTTGGGTGAAGGAATGGGAGGACTTCAAGAAAGTTATAAGCTTCAAGCTTGTTGGTAAGGATAGTGCAATAATTGGGGGCTTTACCGATGTTCCATTCCCAAACAAACGCGAGTTCCAAGATCTTACACGTTTTGCTATTCAGGATTATAATAAGAAAGAGGTTATTTACAATGACTTACTCATCTTCTATTTT</genome_strand>
        <mrna_strand>TCCTATACAATTTATTTTTTCAGAATGCCCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAAGAACAAGTTGTTTCTGGAATGATGTACTATATAACACTTGTGGCAACTGATGATGGAAATAAAAAAGATTATGAAGCCAAGATTTGGGTGAAGGAATGGGAGGACTTCAAGAAAGTTATAAGCTTCAAGCTTGTTGGTAAGGATAGTGCAATAATTGGGGGCTTTACCGATGTTCCATTCCCAAACAAACGCGAGTTCCAAGATCTTACACGTTTTGCTATTCAGGATTATAATAAGAAAGAGGTTATTTACAATGACTTACTCATCTTCTATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>330</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="13128" PGL_stop="20216"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15080" e_stop="15155"/>
            <exon e_start="15339" e_stop="15396"/>
            <exon e_start="15982" e_stop="16176"/>
            <exon e_start="16463" e_stop="16539"/>
            <exon e_start="17284" e_stop="17366"/>
            <exon e_start="17531" e_stop="17582"/>
            <exon e_start="18475" e_stop="18543"/>
            <exon e_start="18787" e_stop="18873"/>
            <exon e_start="18991" e_stop="19052"/>
            <exon e_start="19890" e_stop="20216"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.798" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.702" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="0.943" acc_prob="0.874" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="15080" e_stop="15155" e_length="76"/>
          </exon>
          <intron i_serial="1" don_prob="0.798" acc_prob="0.979">
            <gDNA_intron_boundary i_start="15156" i_stop="15338" i_length="183"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="15339" e_stop="15396" e_length="58"/>
          </exon>
          <intron i_serial="2" don_prob="0.980" acc_prob="0.999">
            <gDNA_intron_boundary i_start="15397" i_stop="15981" i_length="585"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="15982" e_stop="16176" e_length="195"/>
          </exon>
          <intron i_serial="3" don_prob="0.702" acc_prob="0.998">
            <gDNA_intron_boundary i_start="16177" i_stop="16462" i_length="286"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="16463" e_stop="16539" e_length="77"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.997">
            <gDNA_intron_boundary i_start="16540" i_stop="17283" i_length="744"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="17284" e_stop="17366" e_length="83"/>
          </exon>
          <intron i_serial="5" don_prob="0.900" acc_prob="0.992">
            <gDNA_intron_boundary i_start="17367" i_stop="17530" i_length="164"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="17531" e_stop="17582" e_length="52"/>
          </exon>
          <intron i_serial="6" don_prob="0.983" acc_prob="0.954">
            <gDNA_intron_boundary i_start="17583" i_stop="18474" i_length="892"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="18475" e_stop="18543" e_length="69"/>
          </exon>
          <intron i_serial="7" don_prob="0.943" acc_prob="0.874">
            <gDNA_intron_boundary i_start="18544" i_stop="18786" i_length="243"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="18787" e_stop="18873" e_length="87"/>
          </exon>
          <intron i_serial="8" don_prob="0.956" acc_prob="0.985">
            <gDNA_intron_boundary i_start="18874" i_stop="18990" i_length="117"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="18991" e_stop="19052" e_length="62"/>
          </exon>
          <intron i_serial="9" don_prob="0.981" acc_prob="0.992">
            <gDNA_intron_boundary i_start="19053" i_stop="19889" i_length="837"/>
          </intron>
          <exon e_serial="10" e_score="0.979">
            <gDNA_exon_boundary e_start="19890" e_stop="20216" e_length="327"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15080" stop="15155"/>
              <exon start="15339" stop="15396"/>
              <exon start="15982" stop="16176"/>
              <exon start="16463" stop="16539"/>
              <exon start="17284" stop="17366"/>
              <exon start="17531" stop="17582"/>
              <exon start="18475" stop="18543"/>
              <exon start="18787" stop="18859"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305608" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15080" stop="15155"/>
              <exon start="15339" stop="15396"/>
              <exon start="15982" stop="16176"/>
              <exon start="16463" stop="16539"/>
              <exon start="17284" stop="17366"/>
              <exon start="17531" stop="17582"/>
              <exon start="18475" stop="18507"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374030" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15339" stop="15396"/>
              <exon start="15982" stop="16176"/>
              <exon start="16463" stop="16539"/>
              <exon start="17284" stop="17366"/>
              <exon start="17531" stop="17582"/>
              <exon start="18475" stop="18543"/>
              <exon start="18787" stop="18873"/>
              <exon start="18991" stop="19052"/>
              <exon start="19890" stop="19935"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706436" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17284" stop="17366"/>
              <exon start="17531" stop="17582"/>
              <exon start="18475" stop="18543"/>
              <exon start="18787" stop="18873"/>
              <exon start="18991" stop="19052"/>
              <exon start="19890" stop="20216"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374029" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTAGCATACCATATGTGGCGAGTATTCAACTTGAAACCTTGACACTATGGATTGAGTATTCCAGTTCCCATGACAT : GCAAAATGGTATTTTTACATCCTCCTTGGAATAGTTGATGTGGAGGCCAACTTTCTAG : TTGTGAAGGCTTACCAGTACACATCCTTAACAAGCGTGATGTTGCTGGATTGCTGGGCAATTCCGTGTGTTCTGCTTTTTACGTGGTTTTTCTTGAAGACAAAATACAGACCCAGAAAATTAGTTGGTGTTGCCATCTGTATTGCTGGTATTGTCCTGGTGATATTTTCAGATGTACATGCCGAAGATCGATCAA : GTGGTAGCAATCCTATCAAAGGGGATATACTTGTAATTGCTGGAGCCACATTATATGCCGTTAGTAATGTCAGTGAG : GAGTTTTTTGTCAAAAGTGCTGATATGGTTGAACTCATGGCATTTCTGGGCCTTTTTGGTGCCATTGTTAGTGGTTGCCAAAT : AGGCATACTTGAGCGCAATGAGTTGAAGTCCATTCACTGGTCAGCTGGAGCA : GCACTTCCCTTTGTTGGATTTGCATTGGCGATGTTTCTTTTCTACTCATTTGTTCCCATTTTGCTGAAG : AGGAGTGGTGCTACAATGCTAAATCTAGCCTTGCTTACCTCTGATATGTGGGCTGTTGTAATTCGTATCTTTGTATACCATCAGAAG : GTTGACTGGATATATTTTGTAGCTTTTGCTGCTGTTGCTGTGGGTCTTCTTATTTATTCTGG : GCGGGATAAGGTGGATAAGAACGTAGCTGATGAAGGCATTGTAAGAAGCAAGCGATTTGACGAGGAAACTGGCCTAGATAATCCTGCACGAAAAGATGCCATTGAGAGCTCAAGAACTGAAGAAAGTTTTGACGCCGAAACAGTGCCTGGAATATACGGAAGATAAATTTATTGTAGTTTTGAGACTTTCTTTTTTTTTTTTTATTTCTTCCTCTATCCCCTGTAGGAAAGGTCTTATTCCATTTGCGTTAATGTGATGTAGCTGCCAAACAGTCTCTGTCATTTTACTTAAATAAAACTTCAGTATCATTTTATCACTACACCTCA</gDNA_template>
            <first_frame> L  A  Y  H  M  W  R  V  F  N  L  K  P  *  H  Y  G  L  S  I  P  V  P  M  T   : C  K  M  V  F  L  H  P  P  W  N  S  *  C  G  G  Q  L  S  S :   C  E  G  L  P  V  H  I  L  N  K  R  D  V  A  G  L  L  G  N  S  V  C  S  A  F  Y  V  V  F  L  E  D  K  I  Q  T  Q  K  I  S  W  C  C  H  L  Y  C  W  Y  C  P  G  D  I  F  R  C  T  C  R  R  S  I  K :   W  *  Q  S  Y  Q  R  G  Y  T  C  N  C  W  S  H  I  I  C  R  *  *  C  Q  *   : G  V  F  C  Q  K  C  *  Y  G  *  T  H  G  I  S  G  P  F  W  C  H  C  *  W  L  P  N  :  R  H  T  *  A  Q  *  V  E  V  H  S  L  V  S  W  S   : S  T  S  L  C  W  I  C  I  G  D  V  S  F  L  L  I  C  S  H  F  A  E   : E  E  W  C  Y  N  A  K  S  S  L  A  Y  L  *  Y  V  G  C  C  N  S  Y  L  C  I  P  S  E   : G  *  L  D  I  F  C  S  F  C  C  C  C  C  G  S  S  Y  L  F  W  :  A  G  *  G  G  *  E  R  S  *  *  R  H  C  K  K  Q  A  I  *  R  G  N  W  P  R  *  S  C  T  K  R  C  H  *  E  L  K  N  *  R  K  F  *  R  R  N  S  A  W  N  I  R  K  I  N  L  L  *  F  *  D  F  L  F  F  F  L  F  L  P  L  S  P  V  G  K  V  L  F  H  L  R  *  C  D  V  A  A  K  Q  S  L  S  F  Y  L  N  K  T  S  V  S  F  Y  H  Y  T  S </first_frame>
            <second_frame>  *  H  T  I  C  G  E  Y  S  T  *  N  L  D  T  M  D  *  V  F  Q  F  P  *  H  :  A  K  W  Y  F  Y  I  L  L  G  I  V  D  V  E  A  N  F  L   : V  V  K  A  Y  Q  Y  T  S  L  T  S  V  M  L  L  D  C  W  A  I  P  C  V  L  L  F  T  W  F  F  L  K  T  K  Y  R  P  R  K  L  V  G  V  A  I  C  I  A  G  I  V  L  V  I  F  S  D  V  H  A  E  D  R  S   : S  G  S  N  P  I  K  G  D  I  L  V  I  A  G  A  T  L  Y  A  V  S  N  V  S  E  :  E  F  F  V  K  S  A  D  M  V  E  L  M  A  F  L  G  L  F  G  A  I  V  S  G  C  Q  I :   G  I  L  E  R  N  E  L  K  S  I  H  W  S  A  G  A  :  A  L  P  F  V  G  F  A  L  A  M  F  L  F  Y  S  F  V  P  I  L  L  K  :  R  S  G  A  T  M  L  N  L  A  L  L  T  S  D  M  W  A  V  V  I  R  I  F  V  Y  H  Q  K  :  V  D  W  I  Y  F  V  A  F  A  A  V  A  V  G  L  L  I  Y  S  G :   R  D  K  V  D  K  N  V  A  D  E  G  I  V  R  S  K  R  F  D  E  E  T  G  L  D  N  P  A  R  K  D  A  I  E  S  S  R  T  E  E  S  F  D  A  E  T  V  P  G  I  Y  G  R  *  I  Y  C  S  F  E  T  F  F  F  F  F  Y  F  F  L  Y  P  L  *  E  R  S  Y  S  I  C  V  N  V  M  *  L  P  N  S  L  C  H  F  T  *  I  K  L  Q  Y  H  F  I  T  T  P   </second_frame>
            <third_frame>   S  I  P  Y  V  A  S  I  Q  L  E  T  L  T  L  W  I  E  Y  S  S  S  H  D  M :   Q  N  G  I  F  T  S  S  L  E  *  L  M  W  R  P  T  F  *  :  L  *  R  L  T  S  T  H  P  *  Q  A  *  C  C  W  I  A  G  Q  F  R  V  F  C  F  L  R  G  F  S  *  R  Q  N  T  D  P  E  N  *  L  V  L  P  S  V  L  L  V  L  S  W  *  Y  F  Q  M  Y  M  P  K  I  D  Q  :  V  V  A  I  L  S  K  G  I  Y  L  *  L  L  E  P  H  Y  M  P  L  V  M  S  V  R :   S  F  L  S  K  V  L  I  W  L  N  S  W  H  F  W  A  F  L  V  P  L  L  V  V  A  K   : *  A  Y  L  S  A  M  S  *  S  P  F  T  G  Q  L  E  Q :   H  F  P  L  L  D  L  H  W  R  C  F  F  S  T  H  L  F  P  F  C  *  R :   G  V  V  L  Q  C  *  I  *  P  C  L  P  L  I  C  G  L  L  *  F  V  S  L  Y  T  I  R  R :   L  T  G  Y  I  L  *  L  L  L  L  L  L  W  V  F  L  F  I  L   : G  G  I  R  W  I  R  T  *  L  M  K  A  L  *  E  A  S  D  L  T  R  K  L  A  *  I  I  L  H  E  K  M  P  L  R  A  Q  E  L  K  K  V  L  T  P  K  Q  C  L  E  Y  T  E  D  K  F  I  V  V  L  R  L  S  F  F  F  F  I  S  S  S  I  P  C  R  K  G  L  I  P  F  A  L  M  *  C  S  C  Q  T  V  S  V  I  L  L  K  *  N  F  S  I  I  L  S  L  H  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15153" stop="15155"/>
                    <exon start="15339" stop="15396"/>
                    <exon start="15982" stop="16176"/>
                    <exon start="16463" stop="16539"/>
                    <exon start="17284" stop="17366"/>
                    <exon start="17531" stop="17582"/>
                    <exon start="18475" stop="18543"/>
                    <exon start="18787" stop="18873"/>
                    <exon start="18991" stop="19052"/>
                    <exon start="19890" stop="20055"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>849</number_coding_nucleotides>
                  <number_encoded_amino_acids>283</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HAKWYFYILLGIVDVEANFLVVKAYQYTSLTSVMLLDCWAIPCVLLFTWFFLKTKYRPRKLVGVAICIAGIVLVIFSDVHAEDRSSGSNPIKGDILVIAGATLYAVSNVSEEFFVKSADMVELMAFLGLFGAIVSGCQIGILERNELKSIHWSAGAALPFVGFALAMFLFYSFVPILLKRSGATMLNLALLTSDMWAVVIRIFVYHQKVDWIYFVAFAAVAVGLLIYSGRDKVDKNVADEGIVRSKRFDEETGLDNPARKDAIESSRTEESFDAETVPGIYGR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="13128" e_stop="13430"/>
            <exon e_start="14368" e_stop="14462"/>
            <exon e_start="15339" e_stop="15396"/>
            <exon e_start="15982" e_stop="16176"/>
            <exon e_start="16463" e_stop="16539"/>
            <exon e_start="17284" e_stop="17366"/>
            <exon e_start="17531" e_stop="17582"/>
            <exon e_start="18475" e_stop="18543"/>
            <exon e_start="18787" e_stop="18873"/>
            <exon e_start="18991" e_stop="19052"/>
            <exon e_start="19890" e_stop="20216"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.997" e_score="0.997"/>
          <exon-intron don_prob="0.936" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.702" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="0.943" acc_prob="0.874" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="13128" e_stop="13430" e_length="303"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="13431" i_stop="14367" i_length="937"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="14368" e_stop="14462" e_length="95"/>
          </exon>
          <intron i_serial="2" don_prob="0.936" acc_prob="0.979">
            <gDNA_intron_boundary i_start="14463" i_stop="15338" i_length="876"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="15339" e_stop="15396" e_length="58"/>
          </exon>
          <intron i_serial="3" don_prob="0.980" acc_prob="0.999">
            <gDNA_intron_boundary i_start="15397" i_stop="15981" i_length="585"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="15982" e_stop="16176" e_length="195"/>
          </exon>
          <intron i_serial="4" don_prob="0.702" acc_prob="0.998">
            <gDNA_intron_boundary i_start="16177" i_stop="16462" i_length="286"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="16463" e_stop="16539" e_length="77"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.997">
            <gDNA_intron_boundary i_start="16540" i_stop="17283" i_length="744"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="17284" e_stop="17366" e_length="83"/>
          </exon>
          <intron i_serial="6" don_prob="0.900" acc_prob="0.992">
            <gDNA_intron_boundary i_start="17367" i_stop="17530" i_length="164"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="17531" e_stop="17582" e_length="52"/>
          </exon>
          <intron i_serial="7" don_prob="0.983" acc_prob="0.954">
            <gDNA_intron_boundary i_start="17583" i_stop="18474" i_length="892"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="18475" e_stop="18543" e_length="69"/>
          </exon>
          <intron i_serial="8" don_prob="0.943" acc_prob="0.874">
            <gDNA_intron_boundary i_start="18544" i_stop="18786" i_length="243"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="18787" e_stop="18873" e_length="87"/>
          </exon>
          <intron i_serial="9" don_prob="0.956" acc_prob="0.985">
            <gDNA_intron_boundary i_start="18874" i_stop="18990" i_length="117"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="18991" e_stop="19052" e_length="62"/>
          </exon>
          <intron i_serial="10" don_prob="0.981" acc_prob="0.992">
            <gDNA_intron_boundary i_start="19053" i_stop="19889" i_length="837"/>
          </intron>
          <exon e_serial="11" e_score="0.979">
            <gDNA_exon_boundary e_start="19890" e_stop="20216" e_length="327"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13128" stop="13430"/>
              <exon start="14368" stop="14462"/>
              <exon start="15339" stop="15396"/>
              <exon start="15982" stop="16176"/>
              <exon start="16463" stop="16539"/>
              <exon start="17284" stop="17366"/>
              <exon start="17531" stop="17541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720548" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15339" stop="15396"/>
              <exon start="15982" stop="16176"/>
              <exon start="16463" stop="16539"/>
              <exon start="17284" stop="17366"/>
              <exon start="17531" stop="17582"/>
              <exon start="18475" stop="18543"/>
              <exon start="18787" stop="18873"/>
              <exon start="18991" stop="19052"/>
              <exon start="19890" stop="19935"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706436" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17284" stop="17366"/>
              <exon start="17531" stop="17582"/>
              <exon start="18475" stop="18543"/>
              <exon start="18787" stop="18873"/>
              <exon start="18991" stop="19052"/>
              <exon start="19890" stop="20216"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374029" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAATCAATTTTATCATCATAAAAACTTTATTATATAATCCTCGCAAAAAAATATTAATTTTTATTTTGAAGAACAAAGAGAGTGTGCAGTTTTCTGCATTCTCTCTGAAAATTGTTCGCGGTGATTAATTGGGGTTTTTCCCAGTATTTGAAGCTATATAAGTGTATTGAGTAATTTGCTAAATTATGATGAACATGAAGGGAATTTGGACCAAACAGACATTGATTAATCTCCTGTTAGGGCAATTTCTCTCCCTTTTGATTACTTCTACTGGGTTTTTATCATCCGAACTCGCTAGAAAAG : GAATCAATGCACCGACGTCCCAGTCTTTTCTTAATTACGTGCTCTTGGCATTATTTTATGGAGTTTTTATGATTTACAGGCAAGAAGGGATCAAG : GCAAAATGGTATTTTTACATCCTCCTTGGAATAGTTGATGTGGAGGCCAACTTTCTAG : TTGTGAAGGCTTACCAGTACACATCCTTAACAAGCGTGATGTTGCTGGATTGCTGGGCAATTCCGTGTGTTCTGCTTTTTACGTGGTTTTTCTTGAAGACAAAATACAGACCCAGAAAATTAGTTGGTGTTGCCATCTGTATTGCTGGTATTGTCCTGGTGATATTTTCAGATGTACATGCCGAAGATCGATCAA : GTGGTAGCAATCCTATCAAAGGGGATATACTTGTAATTGCTGGAGCCACATTATATGCCGTTAGTAATGTCAGTGAG : GAGTTTTTTGTCAAAAGTGCTGATATGGTTGAACTCATGGCATTTCTGGGCCTTTTTGGTGCCATTGTTAGTGGTTGCCAAAT : AGGCATACTTGAGCGCAATGAGTTGAAGTCCATTCACTGGTCAGCTGGAGCA : GCACTTCCCTTTGTTGGATTTGCATTGGCGATGTTTCTTTTCTACTCATTTGTTCCCATTTTGCTGAAG : AGGAGTGGTGCTACAATGCTAAATCTAGCCTTGCTTACCTCTGATATGTGGGCTGTTGTAATTCGTATCTTTGTATACCATCAGAAG : GTTGACTGGATATATTTTGTAGCTTTTGCTGCTGTTGCTGTGGGTCTTCTTATTTATTCTGG : GCGGGATAAGGTGGATAAGAACGTAGCTGATGAAGGCATTGTAAGAAGCAAGCGATTTGACGAGGAAACTGGCCTAGATAATCCTGCACGAAAAGATGCCATTGAGAGCTCAAGAACTGAAGAAAGTTTTGACGCCGAAACAGTGCCTGGAATATACGGAAGATAAATTTATTGTAGTTTTGAGACTTTCTTTTTTTTTTTTTATTTCTTCCTCTATCCCCTGTAGGAAAGGTCTTATTCCATTTGCGTTAATGTGATGTAGCTGCCAAACAGTCTCTGTCATTTTACTTAAATAAAACTTCAGTATCATTTTATCACTACACCTCA</gDNA_template>
            <first_frame> *  S  I  L  S  S  *  K  L  Y  Y  I  I  L  A  K  K  Y  *  F  L  F  *  R  T  K  R  V  C  S  F  L  H  S  L  *  K  L  F  A  V  I  N  W  G  F  S  Q  Y  L  K  L  Y  K  C  I  E  *  F  A  K  L  *  *  T  *  R  E  F  G  P  N  R  H  *  L  I  S  C  *  G  N  F  S  P  F  *  L  L  L  L  G  F  Y  H  P  N  S  L  E  K  :  E  S  M  H  R  R  P  S  L  F  L  I  T  C  S  W  H  Y  F  M  E  F  L  *  F  T  G  K  K  G  S  R :   Q  N  G  I  F  T  S  S  L  E  *  L  M  W  R  P  T  F  *  :  L  *  R  L  T  S  T  H  P  *  Q  A  *  C  C  W  I  A  G  Q  F  R  V  F  C  F  L  R  G  F  S  *  R  Q  N  T  D  P  E  N  *  L  V  L  P  S  V  L  L  V  L  S  W  *  Y  F  Q  M  Y  M  P  K  I  D  Q  :  V  V  A  I  L  S  K  G  I  Y  L  *  L  L  E  P  H  Y  M  P  L  V  M  S  V  R :   S  F  L  S  K  V  L  I  W  L  N  S  W  H  F  W  A  F  L  V  P  L  L  V  V  A  K   : *  A  Y  L  S  A  M  S  *  S  P  F  T  G  Q  L  E  Q :   H  F  P  L  L  D  L  H  W  R  C  F  F  S  T  H  L  F  P  F  C  *  R :   G  V  V  L  Q  C  *  I  *  P  C  L  P  L  I  C  G  L  L  *  F  V  S  L  Y  T  I  R  R :   L  T  G  Y  I  L  *  L  L  L  L  L  L  W  V  F  L  F  I  L   : G  G  I  R  W  I  R  T  *  L  M  K  A  L  *  E  A  S  D  L  T  R  K  L  A  *  I  I  L  H  E  K  M  P  L  R  A  Q  E  L  K  K  V  L  T  P  K  Q  C  L  E  Y  T  E  D  K  F  I  V  V  L  R  L  S  F  F  F  F  I  S  S  S  I  P  C  R  K  G  L  I  P  F  A  L  M  *  C  S  C  Q  T  V  S  V  I  L  L  K  *  N  F  S  I  I  L  S  L  H  L  </first_frame>
            <second_frame>  N  Q  F  Y  H  H  K  N  F  I  I  *  S  S  Q  K  N  I  N  F  Y  F  E  E  Q  R  E  C  A  V  F  C  I  L  S  E  N  C  S  R  *  L  I  G  V  F  P  S  I  *  S  Y  I  S  V  L  S  N  L  L  N  Y  D  E  H  E  G  N  L  D  Q  T  D  I  D  *  S  P  V  R  A  I  S  L  P  F  D  Y  F  Y  W  V  F  I  I  R  T  R  *  K  R :   N  Q  C  T  D  V  P  V  F  S  *  L  R  A  L  G  I  I  L  W  S  F  Y  D  L  Q  A  R  R  D  Q   : G  K  M  V  F  L  H  P  P  W  N  S  *  C  G  G  Q  L  S  S :   C  E  G  L  P  V  H  I  L  N  K  R  D  V  A  G  L  L  G  N  S  V  C  S  A  F  Y  V  V  F  L  E  D  K  I  Q  T  Q  K  I  S  W  C  C  H  L  Y  C  W  Y  C  P  G  D  I  F  R  C  T  C  R  R  S  I  K :   W  *  Q  S  Y  Q  R  G  Y  T  C  N  C  W  S  H  I  I  C  R  *  *  C  Q  *   : G  V  F  C  Q  K  C  *  Y  G  *  T  H  G  I  S  G  P  F  W  C  H  C  *  W  L  P  N  :  R  H  T  *  A  Q  *  V  E  V  H  S  L  V  S  W  S   : S  T  S  L  C  W  I  C  I  G  D  V  S  F  L  L  I  C  S  H  F  A  E   : E  E  W  C  Y  N  A  K  S  S  L  A  Y  L  *  Y  V  G  C  C  N  S  Y  L  C  I  P  S  E   : G  *  L  D  I  F  C  S  F  C  C  C  C  C  G  S  S  Y  L  F  W  :  A  G  *  G  G  *  E  R  S  *  *  R  H  C  K  K  Q  A  I  *  R  G  N  W  P  R  *  S  C  T  K  R  C  H  *  E  L  K  N  *  R  K  F  *  R  R  N  S  A  W  N  I  R  K  I  N  L  L  *  F  *  D  F  L  F  F  F  L  F  L  P  L  S  P  V  G  K  V  L  F  H  L  R  *  C  D  V  A  A  K  Q  S  L  S  F  Y  L  N  K  T  S  V  S  F  Y  H  Y  T  S </second_frame>
            <third_frame>   I  N  F  I  I  I  K  T  L  L  Y  N  P  R  K  K  I  L  I  F  I  L  K  N  K  E  S  V  Q  F  S  A  F  S  L  K  I  V  R  G  D  *  L  G  F  F  P  V  F  E  A  I  *  V  Y  *  V  I  C  *  I  M  M  N  M  K  G  I  W  T  K  Q  T  L  I  N  L  L  L  G  Q  F  L  S  L  L  I  T  S  T  G  F  L  S  S  E  L  A  R  K   : G  I  N  A  P  T  S  Q  S  F  L  N  Y  V  L  L  A  L  F  Y  G  V  F  M  I  Y  R  Q  E  G  I  K  :  A  K  W  Y  F  Y  I  L  L  G  I  V  D  V  E  A  N  F  L   : V  V  K  A  Y  Q  Y  T  S  L  T  S  V  M  L  L  D  C  W  A  I  P  C  V  L  L  F  T  W  F  F  L  K  T  K  Y  R  P  R  K  L  V  G  V  A  I  C  I  A  G  I  V  L  V  I  F  S  D  V  H  A  E  D  R  S   : S  G  S  N  P  I  K  G  D  I  L  V  I  A  G  A  T  L  Y  A  V  S  N  V  S  E  :  E  F  F  V  K  S  A  D  M  V  E  L  M  A  F  L  G  L  F  G  A  I  V  S  G  C  Q  I :   G  I  L  E  R  N  E  L  K  S  I  H  W  S  A  G  A  :  A  L  P  F  V  G  F  A  L  A  M  F  L  F  Y  S  F  V  P  I  L  L  K  :  R  S  G  A  T  M  L  N  L  A  L  L  T  S  D  M  W  A  V  V  I  R  I  F  V  Y  H  Q  K  :  V  D  W  I  Y  F  V  A  F  A  A  V  A  V  G  L  L  I  Y  S  G :   R  D  K  V  D  K  N  V  A  D  E  G  I  V  R  S  K  R  F  D  E  E  T  G  L  D  N  P  A  R  K  D  A  I  E  S  S  R  T  E  E  S  F  D  A  E  T  V  P  G  I  Y  G  R  *  I  Y  C  S  F  E  T  F  F  F  F  F  Y  F  F  L  Y  P  L  *  E  R  S  Y  S  I  C  V  N  V  M  *  L  P  N  S  L  C  H  F  T  *  I  K  L  Q  Y  H  F  I  T  T  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13310" stop="13430"/>
                    <exon start="14368" stop="14462"/>
                    <exon start="15339" stop="15396"/>
                    <exon start="15982" stop="16176"/>
                    <exon start="16463" stop="16539"/>
                    <exon start="17284" stop="17366"/>
                    <exon start="17531" stop="17582"/>
                    <exon start="18475" stop="18543"/>
                    <exon start="18787" stop="18873"/>
                    <exon start="18991" stop="19052"/>
                    <exon start="19890" stop="20055"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1062</number_coding_nucleotides>
                  <number_encoded_amino_acids>354</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IMMNMKGIWTKQTLINLLLGQFLSLLITSTGFLSSELARKGINAPTSQSFLNYVLLALFYGVFMIYRQEGIKAKWYFYILLGIVDVEANFLVVKAYQYTSLTSVMLLDCWAIPCVLLFTWFFLKTKYRPRKLVGVAICIAGIVLVIFSDVHAEDRSSGSNPIKGDILVIAGATLYAVSNVSEEFFVKSADMVELMAFLGLFGAIVSGCQIGILERNELKSIHWSAGAALPFVGFALAMFLFYSFVPILLKRSGATMLNLALLTSDMWAVVIRIFVYHQKVDWIYFVAFAAVAVGLLIYSGRDKVDKNVADEGIVRSKRFDEETGLDNPARKDAIESSRTEESFDAETVPGIYGR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="21037" PGL_stop="20333"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="21037" e_stop="20992"/>
            <exon e_start="20879" e_stop="20333"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.879" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="21037" e_stop="20992" e_length="46"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.879">
            <gDNA_intron_boundary i_start="20991" i_stop="20880" i_length="112"/>
          </intron>
          <exon e_serial="2" e_score="0.991">
            <gDNA_exon_boundary e_start="20879" e_stop="20333" e_length="547"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21037" stop="20992"/>
              <exon start="20879" stop="20333"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349343" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20549" stop="20349"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395857" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTAAAGTTCTTGCTGAGCATCAATTGGCCCATCCTGATGAAGAAG : GTATGCCAATAAACAACCTGTACAGTACGTGCCGAGAACGGTTCTTGGTGAGCAGTCAAGTTACTTTGAATTCACATTTGACAGAATTTAAAGACCATGAGTTGATCAAAACCAAAAGAAATTCTGATGGTCAAGATTGCCTTTGTATTCCTCTCACAAATGAAGCCCTTCAGAAACTTATAGCAGATATCGTTTGATAGAGCTTCCAATACAAGAAGAGAAATCACTCAGCAGCAAATTTGAAGCAGCAGAGGCATGTTTAATTTAATGTATGACAAACTTCATGTATAAAAAAGTGCACATCTTTTCACTTGTGCATAGGAGTTGGCCTGATCCTCAGCTGGCTTTTACTCAACATGCTAGGATATCTATTAAATATGGTTAACTTATCAAGCATCTCACAGAGAGAGCAATATGACCGGAATGTATTCAGTTTGTGGCTTTGTTAGATCCTCATGTAATCTGCTTGGAATGTGTTGGTGTTTCTTAATGTATTTTAAGAAGATTACACAATTTAACTAATTAGTGATTATTATATTTCAGCTGT</gDNA_template>
            <first_frame> F  K  V  L  A  E  H  Q  L  A  H  P  D  E  E   : G  M  P  I  N  N  L  Y  S  T  C  R  E  R  F  L  V  S  S  Q  V  T  L  N  S  H  L  T  E  F  K  D  H  E  L  I  K  T  K  R  N  S  D  G  Q  D  C  L  C  I  P  L  T  N  E  A  L  Q  K  L  I  A  D  I  V  *  *  S  F  Q  Y  K  K  R  N  H  S  A  A  N  L  K  Q  Q  R  H  V  *  F  N  V  *  Q  T  S  C  I  K  K  C  T  S  F  H  L  C  I  G  V  G  L  I  L  S  W  L  L  L  N  M  L  G  Y  L  L  N  M  V  N  L  S  S  I  S  Q  R  E  Q  Y  D  R  N  V  F  S  L  W  L  C  *  I  L  M  *  S  A  W  N  V  L  V  F  L  N  V  F  *  E  D  Y  T  I  *  L  I  S  D  Y  Y  I  S  A   </first_frame>
            <second_frame>  L  K  F  L  L  S  I  N  W  P  I  L  M  K  K  :  V  C  Q  *  T  T  C  T  V  R  A  E  N  G  S  W  *  A  V  K  L  L  *  I  H  I  *  Q  N  L  K  T  M  S  *  S  K  P  K  E  I  L  M  V  K  I  A  F  V  F  L  S  Q  M  K  P  F  R  N  L  *  Q  I  S  F  D  R  A  S  N  T  R  R  E  I  T  Q  Q  Q  I  *  S  S  R  G  M  F  N  L  M  Y  D  K  L  H  V  *  K  S  A  H  L  F  T  C  A  *  E  L  A  *  S  S  A  G  F  Y  S  T  C  *  D  I  Y  *  I  W  L  T  Y  Q  A  S  H  R  E  S  N  M  T  G  M  Y  S  V  C  G  F  V  R  S  S  C  N  L  L  G  M  C  W  C  F  L  M  Y  F  K  K  I  T  Q  F  N  *  L  V  I  I  I  F  Q  L  </second_frame>
            <third_frame>   *  S  S  C  *  A  S  I  G  P  S  *  *  R  R :   Y  A  N  K  Q  P  V  Q  Y  V  P  R  T  V  L  G  E  Q  S  S  Y  F  E  F  T  F  D  R  I  *  R  P  *  V  D  Q  N  Q  K  K  F  *  W  S  R  L  P  L  Y  S  S  H  K  *  S  P  S  E  T  Y  S  R  Y  R  L  I  E  L  P  I  Q  E  E  K  S  L  S  S  K  F  E  A  A  E  A  C  L  I  *  C  M  T  N  F  M  Y  K  K  V  H  I  F  S  L  V  H  R  S  W  P  D  P  Q  L  A  F  T  Q  H  A  R  I  S  I  K  Y  G  *  L  I  K  H  L  T  E  R  A  I  *  P  E  C  I  Q  F  V  A  L  L  D  P  H  V  I  C  L  E  C  V  G  V  S  *  C  I  L  R  R  L  H  N  L  T  N  *  *  L  L  Y  F  S  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21037" stop="20992"/>
                    <exon start="20879" stop="20683"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FKVLAEHQLAHPDEEGMPINNLYSTCRERFLVSSQVTLNSHLTEFKDHELIKTKRNSDGQDCLCIPLTNEALQKLIADIV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="24073" PGL_stop="21162"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24073" e_stop="23784"/>
            <exon e_start="22943" e_stop="22837"/>
            <exon e_start="22698" e_stop="22566"/>
            <exon e_start="21841" e_stop="21547"/>
            <exon e_start="21219" e_stop="21162"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.654" acc_prob="0.861" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.717" acc_prob="0.797" e_score="0.980"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="24073" e_stop="23784" e_length="290"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="23783" i_stop="22944" i_length="840"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="22943" e_stop="22837" e_length="107"/>
          </exon>
          <intron i_serial="2" don_prob="0.654" acc_prob="0.861">
            <gDNA_intron_boundary i_start="22836" i_stop="22699" i_length="138"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="22698" e_stop="22566" e_length="133"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="22565" i_stop="21842" i_length="724"/>
          </intron>
          <exon e_serial="4" e_score="0.980">
            <gDNA_exon_boundary e_start="21841" e_stop="21547" e_length="295"/>
          </exon>
          <intron i_serial="4" don_prob="0.717" acc_prob="0.797">
            <gDNA_intron_boundary i_start="21546" i_stop="21220" i_length="327"/>
          </intron>
          <exon e_serial="5" e_score="0.983">
            <gDNA_exon_boundary e_start="21219" e_stop="21162" e_length="58"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24073" stop="23784"/>
              <exon start="22943" stop="22837"/>
              <exon start="22698" stop="22566"/>
              <exon start="21841" stop="21707"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343081" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24063" stop="23784"/>
              <exon start="22943" stop="22837"/>
              <exon start="22698" stop="22569"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200435" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24032" stop="23784"/>
              <exon start="22943" stop="22837"/>
              <exon start="22698" stop="22566"/>
              <exon start="21841" stop="21793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305929" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24007" stop="23784"/>
              <exon start="22943" stop="22905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395790" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24006" stop="23784"/>
              <exon start="22943" stop="22837"/>
              <exon start="22698" stop="22566"/>
              <exon start="21841" stop="21820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209101" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22886" stop="22837"/>
              <exon start="22698" stop="22566"/>
              <exon start="21841" stop="21547"/>
              <exon start="21219" stop="21162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235787" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAGCCCTAAGTTTCTTCCTAAGTCTCCGGCAGAGTCGCCGGGAAATAGACCGGAGAGAGCAGGGGGACGATGAGAGTATACAATTTTGGAGTCTAGAACTTGTGTCAACTTGTGCTTGTTAATTTACAGAGTCTTAATATTTCATATTTTTACTGAAATGGATGTAGACGAGATTGAGGAAGAGGAGTTTGGATTCTCGAGAAACTATTTCCTTGCTAAAGAATTGGGCTCTTCTTCAAGGAAAAAATCTGCTCGGAAGCTTTCAGAAATCGATCTCGTTGACGAAGAG : GAATTAAGAGAGGTGGCAGCTAGTATTGAGCCCAAACATGAGAAAGAAGTTAATGAGTTGATCAGTAGCTACCAAAGTTTATATTCAAAATGGCTTTTTGTGCTAAG : GAGCGGCTTTGCACTTTTGATGTATGGATTTGGATCAAAGAAAGCTTTGATTGAAGATTTTGCCTCAAAATCTTTGACTGAGTACTCTGTCATAGTCGTCAACGGGTATCTCCAATCTATAAATCTTAAACAG : GTGGTGATAACACTGGCTGAGCTCCTCTGGGATCAAGTAAAATTGCGACAAAAGACTACCTCAGGAAGTCTGTGTAAAAGCCAACAACCATTTAACACTAGATCCATGTCTGACCTTCTTACTTTTCTAGACAGTCCAGACCTAGAAGTCGAGGACTGTTTTGTTTGCATTCTTGTTCACAACATTGATGGTCCTGGATTACGTGATTCTGACAGCCAACAATGTGTTGCAAGCATTGCTGCTTGTTCTCATGTTCGTATGGTTGCTTCCATTGACCATGTCAACGCTCCTCTTT : TGTGGGACAAGAAGATGGTTCATACACAATTTGACTGGTACTGGTGCCATGTTCCTAC</gDNA_template>
            <first_frame> A  A  L  S  F  F  L  S  L  R  Q  S  R  R  E  I  D  R  R  E  Q  G  D  D  E  S  I  Q  F  W  S  L  E  L  V  S  T  C  A  C  *  F  T  E  S  *  Y  F  I  F  L  L  K  W  M  *  T  R  L  R  K  R  S  L  D  S  R  E  T  I  S  L  L  K  N  W  A  L  L  Q  G  K  N  L  L  G  S  F  Q  K  S  I  S  L  T  K  R :   N  *  E  R  W  Q  L  V  L  S  P  N  M  R  K  K  L  M  S  *  S  V  A  T  K  V  Y  I  Q  N  G  F  L  C  *   : G  A  A  L  H  F  *  C  M  D  L  D  Q  R  K  L  *  L  K  I  L  P  Q  N  L  *  L  S  T  L  S  *  S  S  T  G  I  S  N  L  *  I  L  N  R :   W  *  *  H  W  L  S  S  S  G  I  K  *  N  C  D  K  R  L  P  Q  E  V  C  V  K  A  N  N  H  L  T  L  D  P  C  L  T  F  L  L  F  *  T  V  Q  T  *  K  S  R  T  V  L  F  A  F  L  F  T  T  L  M  V  L  D  Y  V  I  L  T  A  N  N  V  L  Q  A  L  L  L  V  L  M  F  V  W  L  L  P  L  T  M  S  T  L  L  F  :  C  G  T  R  R  W  F  I  H  N  L  T  G  T  G  A  M  F  L  </first_frame>
            <second_frame>  Q  P  *  V  S  S  *  V  S  G  R  V  A  G  K  *  T  G  E  S  R  G  T  M  R  V  Y  N  F  G  V  *  N  L  C  Q  L  V  L  V  N  L  Q  S  L  N  I  S  Y  F  Y  *  N  G  C  R  R  D  *  G  R  G  V  W  I  L  E  K  L  F  P  C  *  R  I  G  L  F  F  K  E  K  I  C  S  E  A  F  R  N  R  S  R  *  R  R   : G  I  K  R  G  G  S  *  Y  *  A  Q  T  *  E  R  S  *  *  V  D  Q  *  L  P  K  F  I  F  K  M  A  F  C  A  K  :  E  R  L  C  T  F  D  V  W  I  W  I  K  E  S  F  D  *  R  F  C  L  K  I  F  D  *  V  L  C  H  S  R  Q  R  V  S  P  I  Y  K  S  *  T   : G  G  D  N  T  G  *  A  P  L  G  S  S  K  I  A  T  K  D  Y  L  R  K  S  V  *  K  P  T  T  I  *  H  *  I  H  V  *  P  S  Y  F  S  R  Q  S  R  P  R  S  R  G  L  F  C  L  H  S  C  S  Q  H  *  W  S  W  I  T  *  F  *  Q  P  T  M  C  C  K  H  C  C  L  F  S  C  S  Y  G  C  F  H  *  P  C  Q  R  S  S  F :   V  G  Q  E  D  G  S  Y  T  I  *  L  V  L  V  P  C  S  Y </second_frame>
            <third_frame>   S  P  K  F  L  P  K  S  P  A  E  S  P  G  N  R  P  E  R  A  G  G  R  *  E  Y  T  I  L  E  S  R  T  C  V  N  L  C  L  L  I  Y  R  V  L  I  F  H  I  F  T  E  M  D  V  D  E  I  E  E  E  E  F  G  F  S  R  N  Y  F  L  A  K  E  L  G  S  S  S  R  K  K  S  A  R  K  L  S  E  I  D  L  V  D  E  E  :  E  L  R  E  V  A  A  S  I  E  P  K  H  E  K  E  V  N  E  L  I  S  S  Y  Q  S  L  Y  S  K  W  L  F  V  L  R :   S  G  F  A  L  L  M  Y  G  F  G  S  K  K  A  L  I  E  D  F  A  S  K  S  L  T  E  Y  S  V  I  V  V  N  G  Y  L  Q  S  I  N  L  K  Q  :  V  V  I  T  L  A  E  L  L  W  D  Q  V  K  L  R  Q  K  T  T  S  G  S  L  C  K  S  Q  Q  P  F  N  T  R  S  M  S  D  L  L  T  F  L  D  S  P  D  L  E  V  E  D  C  F  V  C  I  L  V  H  N  I  D  G  P  G  L  R  D  S  D  S  Q  Q  C  V  A  S  I  A  A  C  S  H  V  R  M  V  A  S  I  D  H  V  N  A  P  L   : L  W  D  K  K  M  V  H  T  Q  F  D  W  Y  W  C  H  V  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23999" stop="23784"/>
                    <exon start="22943" stop="22837"/>
                    <exon start="22698" stop="22566"/>
                    <exon start="21841" stop="21547"/>
                    <exon start="21219" stop="21164"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>807</number_coding_nucleotides>
                  <number_encoded_amino_acids>269</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EYTILESRTCVNLCLLIYRVLIFHIFTEMDVDEIEEEEFGFSRNYFLAKELGSSSRKKSARKLSEIDLVDEEELREVAASIEPKHEKEVNELISSYQSLYSKWLFVLRSGFALLMYGFGSKKALIEDFASKSLTEYSVIVVNGYLQSINLKQVVITLAELLWDQVKLRQKTTSGSLCKSQQPFNTRSMSDLLTFLDSPDLEVEDCFVCILVHNIDGPGLRDSDSQQCVASIAACSHVRMVASIDHVNAPLLWDKKMVHTQFDWYWCHVP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="29969" PGL_stop="25195"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29969" e_stop="29953"/>
            <exon e_start="29855" e_stop="29757"/>
            <exon e_start="27765" e_stop="27609"/>
            <exon e_start="26455" e_stop="26346"/>
            <exon e_start="25851" e_stop="25702"/>
            <exon e_start="25290" e_stop="25195"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.813" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.636" e_score="1.000"/>
          <exon-intron don_prob="0.176" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="29969" e_stop="29953" e_length="17"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="29952" i_stop="29856" i_length="97"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="29855" e_stop="29757" e_length="99"/>
          </exon>
          <intron i_serial="2" don_prob="0.813" acc_prob="0.992">
            <gDNA_intron_boundary i_start="29756" i_stop="27766" i_length="1991"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="27765" e_stop="27609" e_length="157"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="27608" i_stop="26456" i_length="1153"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="26455" e_stop="26346" e_length="110"/>
          </exon>
          <intron i_serial="4" don_prob="0.984" acc_prob="0.636">
            <gDNA_intron_boundary i_start="26345" i_stop="25852" i_length="494"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="25851" e_stop="25702" e_length="150"/>
          </exon>
          <intron i_serial="5" don_prob="0.176" acc_prob="0.993">
            <gDNA_intron_boundary i_start="25701" i_stop="25291" i_length="411"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="25290" e_stop="25195" e_length="96"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29969" stop="29953"/>
              <exon start="29855" stop="29757"/>
              <exon start="27765" stop="27609"/>
              <exon start="26455" stop="26346"/>
              <exon start="25851" stop="25702"/>
              <exon start="25290" stop="25195"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242671" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGACGATTACTTCGAG : GGCGAAAGTTCTGAGATGTACGACTATCAAGTTGATTGGGGGATGCCAGATAGTTCTAGCCCGCTGCACCCAGTTTATTTTGCTAAGTGCTTGACTAAG : GCTGTTCACATGAAACATGCTAAGATGATGGATCATCCATCAAATGGCATTTCAATTTGGGGACGCCTCAAGCCTGCCTTTCTGGAAGAAGAATATTACGTGCGAAGGCTCTTCAGTGGCGATGAAGTTAGTGACGGCTCCACCTTGGATTGGAAAG : ATGGAGAAATTTTGAGCTTTAGTTCAAGATATGACAAGAGCCGCACTTTGTCTTCTATCTACAGATTGGAAATCATGAGAGTCGACCTATTTTCTGTGTATGGTGCTCAG : TTAGCAGTAAATTTGTATGACTTCCATGATGCTGAGCCTGACAGTCTTGTATACTCAGCTCCAGCAATTTTAGAGTGGTTTCGGCAGCAAGGAATAAGGTGCAAATATGCACTTAAAGCTCTTTGCAGAAAGAAAGGACTTCATGTTGAG : AGAGCAAATTTGATTGGAGTTGACAGTCTTGGCATGGATGTCAGAGTTCTCTCTGGAACAGAAGTGTGGACACATCGTTTCCCCTTCAAAGTTAGG</gDNA_template>
            <first_frame> L  T  I  T  S  R :   A  K  V  L  R  C  T  T  I  K  L  I  G  G  C  Q  I  V  L  A  R  C  T  Q  F  I  L  L  S  A  *  L  R :   L  F  T  *  N  M  L  R  *  W  I  I  H  Q  M  A  F  Q  F  G  D  A  S  S  L  P  F  W  K  K  N  I  T  C  E  G  S  S  V  A  M  K  L  V  T  A  P  P  W  I  G  K  :  M  E  K  F  *  A  L  V  Q  D  M  T  R  A  A  L  C  L  L  S  T  D  W  K  S  *  E  S  T  Y  F  L  C  M  V  L  S :   *  Q  *  I  C  M  T  S  M  M  L  S  L  T  V  L  Y  T  Q  L  Q  Q  F  *  S  G  F  G  S  K  E  *  G  A  N  M  H  L  K  L  F  A  E  R  K  D  F  M  L  R :   E  Q  I  *  L  E  L  T  V  L  A  W  M  S  E  F  S  L  E  Q  K  C  G  H  I  V  S  P  S  K  L   </first_frame>
            <second_frame>  *  R  L  L  R   : G  R  K  F  *  D  V  R  L  S  S  *  L  G  D  A  R  *  F  *  P  A  A  P  S  L  F  C  *  V  L  D  *   : G  C  S  H  E  T  C  *  D  D  G  S  S  I  K  W  H  F  N  L  G  T  P  Q  A  C  L  S  G  R  R  I  L  R  A  K  A  L  Q  W  R  *  S  *  *  R  L  H  L  G  L  E  R :   W  R  N  F  E  L  *  F  K  I  *  Q  E  P  H  F  V  F  Y  L  Q  I  G  N  H  E  S  R  P  I  F  C  V  W  C  S   : V  S  S  K  F  V  *  L  P  *  C  *  A  *  Q  S  C  I  L  S  S  S  N  F  R  V  V  S  A  A  R  N  K  V  Q  I  C  T  *  S  S  L  Q  K  E  R  T  S  C  *   : E  S  K  F  D  W  S  *  Q  S  W  H  G  C  Q  S  S  L  W  N  R  S  V  D  T  S  F  P  L  Q  S  *  </second_frame>
            <third_frame>   D  D  Y  F  E  :  G  E  S  S  E  M  Y  D  Y  Q  V  D  W  G  M  P  D  S  S  S  P  L  H  P  V  Y  F  A  K  C  L  T  K  :  A  V  H  M  K  H  A  K  M  M  D  H  P  S  N  G  I  S  I  W  G  R  L  K  P  A  F  L  E  E  E  Y  Y  V  R  R  L  F  S  G  D  E  V  S  D  G  S  T  L  D  W  K   : D  G  E  I  L  S  F  S  S  R  Y  D  K  S  R  T  L  S  S  I  Y  R  L  E  I  M  R  V  D  L  F  S  V  Y  G  A  Q  :  L  A  V  N  L  Y  D  F  H  D  A  E  P  D  S  L  V  Y  S  A  P  A  I  L  E  W  F  R  Q  Q  G  I  R  C  K  Y  A  L  K  A  L  C  R  K  K  G  L  H  V  E  :  R  A  N  L  I  G  V  D  S  L  G  M  D  V  R  V  L  S  G  T  E  V  W  T  H  R  F  P  F  K  V  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29967" stop="29953"/>
                    <exon start="29855" stop="29757"/>
                    <exon start="27765" stop="27609"/>
                    <exon start="26455" stop="26346"/>
                    <exon start="25851" stop="25702"/>
                    <exon start="25290" stop="25195"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>627</number_coding_nucleotides>
                  <number_encoded_amino_acids>209</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DDYFEGESSEMYDYQVDWGMPDSSSPLHPVYFAKCLTKAVHMKHAKMMDHPSNGISIWGRLKPAFLEEEYYVRRLFSGDEVSDGSTLDWKDGEILSFSSRYDKSRTLSSIYRLEIMRVDLFSVYGAQLAVNLYDFHDAEPDSLVYSAPAILEWFRQQGIRCKYALKALCRKKGLHVERANLIGVDSLGMDVRVLSGTEVWTHRFPFKVR</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="33912" PGL_stop="30002"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33912" e_stop="33809"/>
            <exon e_start="32649" e_stop="32526"/>
            <exon e_start="31574" e_stop="31343"/>
            <exon e_start="31209" e_stop="31107"/>
            <exon e_start="31010" e_stop="30946"/>
            <exon e_start="30072" e_stop="30002"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.741" acc_prob="0.799" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.829" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.983" e_score="1.000"/>
          <exon-only e_score="0.958"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="33912" e_stop="33809" e_length="104"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.994">
            <gDNA_intron_boundary i_start="33808" i_stop="32650" i_length="1159"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="32649" e_stop="32526" e_length="124"/>
          </exon>
          <intron i_serial="2" don_prob="0.741" acc_prob="0.799">
            <gDNA_intron_boundary i_start="32525" i_stop="31575" i_length="951"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="31574" e_stop="31343" e_length="232"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.990">
            <gDNA_intron_boundary i_start="31342" i_stop="31210" i_length="133"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="31209" e_stop="31107" e_length="103"/>
          </exon>
          <intron i_serial="4" don_prob="0.829" acc_prob="0.986">
            <gDNA_intron_boundary i_start="31106" i_stop="31011" i_length="96"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="31010" e_stop="30946" e_length="65"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.983">
            <gDNA_intron_boundary i_start="30945" i_stop="30073" i_length="873"/>
          </intron>
          <exon e_serial="6" e_score="0.958">
            <gDNA_exon_boundary e_start="30072" e_stop="30002" e_length="71"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33912" stop="33809"/>
              <exon start="32649" stop="32526"/>
              <exon start="31574" stop="31343"/>
              <exon start="31209" stop="31121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622737" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33912" stop="33809"/>
              <exon start="32649" stop="32526"/>
              <exon start="31574" stop="31343"/>
              <exon start="31209" stop="31180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310718" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33874" stop="33809"/>
              <exon start="32649" stop="32526"/>
              <exon start="31574" stop="31343"/>
              <exon start="31209" stop="31107"/>
              <exon start="31010" stop="30966"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253698" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33852" stop="33809"/>
              <exon start="32649" stop="32526"/>
              <exon start="31574" stop="31343"/>
              <exon start="31209" stop="31107"/>
              <exon start="31010" stop="30946"/>
              <exon start="30072" stop="30002"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343009" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33841" stop="33809"/>
              <exon start="32649" stop="32526"/>
              <exon start="31574" stop="31343"/>
              <exon start="31209" stop="31107"/>
              <exon start="31010" stop="30961"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276415" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGACAAAAAGATCTTCGATTCAATTAACGTTTTCCTCAGTTTCATATCATTAATACTCTGTTTCTTGATGTTCATCTCCGCGCCTTCATCATCAATCTCCATCG : GTCCCTCGCAATGTTTCATATGTCATGCTGATGGAGGTAGTTGCTCAGCATCATTAGGAGCTGCAAGCAGTTGGATCAAGCCATCATACGAGGTTCAGATATTCTCTGACCATTCAGGTATAAG : TTTCAGGACTGAGAACCCTTTCTTTGGAGCTGCACAATCGCATTGGCTTGCTGTAGGACACGAGAGTAGCCTTTCAAGAATTTCAGTTGCAGCAGATTACCCAGATTCTGTTCCTGATTCCCCTAACTATGTCCGCAACAGTGGCTATCACCCTCTTGAAGGAATGCGAGACCAGAGACGAGTTCGTGATACTGAACTCACAGCTGCTGAAATAGCAAGGACAACTGTTGAG : GCTAATAACAATGCATTGTTGATATTCCCTGGCACGGTTCATTGTGAACCTCACGAACAAGTGTCATGGGCAGAATTTCAGTACGTGATTGATGAATATGGAG : ACATATTCTTTGAAATTTATGATGACAAGAATATCTTGCGGAATCGGGATGCAAGTAATTCCGTG : AATGCATTGATTGGAATGGAATTCTCCCAATACGAGAAGAGGAGGGTAGAATCACCTGATGACATCAATTT</gDNA_template>
            <first_frame> R  Q  K  D  L  R  F  N  *  R  F  P  Q  F  H  I  I  N  T  L  F  L  D  V  H  L  R  A  F  I  I  N  L  H  R :   S  L  A  M  F  H  M  S  C  *  W  R  *  L  L  S  I  I  R  S  C  K  Q  L  D  Q  A  I  I  R  G  S  D  I  L  *  P  F  R  Y  K  :  F  Q  D  *  E  P  F  L  W  S  C  T  I  A  L  A  C  C  R  T  R  E  *  P  F  K  N  F  S  C  S  R  L  P  R  F  C  S  *  F  P  *  L  C  P  Q  Q  W  L  S  P  S  *  R  N  A  R  P  E  T  S  S  *  Y  *  T  H  S  C  *  N  S  K  D  N  C  *   : G  *  *  Q  C  I  V  D  I  P  W  H  G  S  L  *  T  S  R  T  S  V  M  G  R  I  S  V  R  D  *  *  I  W  R :   H  I  L  *  N  L  *  *  Q  E  Y  L  A  E  S  G  C  K  *  F  R   : E  C  I  D  W  N  G  I  L  P  I  R  E  E  E  G  R  I  T  *  *  H  Q  F </first_frame>
            <second_frame>  D  K  K  I  F  D  S  I  N  V  F  L  S  F  I  S  L  I  L  C  F  L  M  F  I  S  A  P  S  S  S  I  S  I   : G  P  S  Q  C  F  I  C  H  A  D  G  G  S  C  S  A  S  L  G  A  A  S  S  W  I  K  P  S  Y  E  V  Q  I  F  S  D  H  S  G  I  S :   F  R  T  E  N  P  F  F  G  A  A  Q  S  H  W  L  A  V  G  H  E  S  S  L  S  R  I  S  V  A  A  D  Y  P  D  S  V  P  D  S  P  N  Y  V  R  N  S  G  Y  H  P  L  E  G  M  R  D  Q  R  R  V  R  D  T  E  L  T  A  A  E  I  A  R  T  T  V  E  :  A  N  N  N  A  L  L  I  F  P  G  T  V  H  C  E  P  H  E  Q  V  S  W  A  E  F  Q  Y  V  I  D  E  Y  G   : D  I  F  F  E  I  Y  D  D  K  N  I  L  R  N  R  D  A  S  N  S  V  :  N  A  L  I  G  M  E  F  S  Q  Y  E  K  R  R  V  E  S  P  D  D  I  N   </second_frame>
            <third_frame>   T  K  R  S  S  I  Q  L  T  F  S  S  V  S  Y  H  *  Y  S  V  S  *  C  S  S  P  R  L  H  H  Q  S  P  S  :  V  P  R  N  V  S  Y  V  M  L  M  E  V  V  A  Q  H  H  *  E  L  Q  A  V  G  S  S  H  H  T  R  F  R  Y  S  L  T  I  Q  V  *   : V  S  G  L  R  T  L  S  L  E  L  H  N  R  I  G  L  L  *  D  T  R  V  A  F  Q  E  F  Q  L  Q  Q  I  T  Q  I  L  F  L  I  P  L  T  M  S  A  T  V  A  I  T  L  L  K  E  C  E  T  R  D  E  F  V  I  L  N  S  Q  L  L  K  *  Q  G  Q  L  L  R :   L  I  T  M  H  C  *  Y  S  L  A  R  F  I  V  N  L  T  N  K  C  H  G  Q  N  F  S  T  *  L  M  N  M  E  :  T  Y  S  L  K  F  M  M  T  R  I  S  C  G  I  G  M  Q  V  I  P  * :   M  H  *  L  E  W  N  S  P  N  T  R  R  G  G  *  N  H  L  M  T  S  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33911" stop="33809"/>
                    <exon start="32649" stop="32526"/>
                    <exon start="31574" stop="31343"/>
                    <exon start="31209" stop="31107"/>
                    <exon start="31010" stop="30946"/>
                    <exon start="30072" stop="30004"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>696</number_coding_nucleotides>
                  <number_encoded_amino_acids>232</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DKKIFDSINVFLSFISLILCFLMFISAPSSSISIGPSQCFICHADGGSCSASLGAASSWIKPSYEVQIFSDHSGISFRTENPFFGAAQSHWLAVGHESSLSRISVAADYPDSVPDSPNYVRNSGYHPLEGMRDQRRVRDTELTAAEIARTTVEANNNALLIFPGTVHCEPHEQVSWAEFQYVIDEYGDIFFEIYDDKNILRNRDASNSVNALIGMEFSQYEKRRVESPDDIN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="33907" e_stop="33809"/>
            <exon e_start="32649" e_stop="32533"/>
            <exon e_start="31574" e_stop="31521"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.994" e_score="0.980"/>
          <exon-intron don_prob="0.887" acc_prob="0.799" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="33907" e_stop="33809" e_length="99"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.994">
            <gDNA_intron_boundary i_start="33808" i_stop="32650" i_length="1159"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="32649" e_stop="32533" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.887" acc_prob="0.799">
            <gDNA_intron_boundary i_start="32532" i_stop="31575" i_length="958"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="31574" e_stop="31521" e_length="54"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33907" stop="33809"/>
              <exon start="32649" stop="32533"/>
              <exon start="31574" stop="31521"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249528" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAGATCTTCGATTCAATTAACGTTTTCCTCAGTTTCATATCATTAATACTCTGTTTCTTGATGTTCATCTCCGCGCCTTCATCATCAATCTCCATCG : GTCCCTCGCAATGTTTCATATGTCATGCTGATGGAGGTAGTTGCTCAGCATCATTAGGAGCTGCAAGCAGTTGGATCAAGCCATCATACGAGGTTCAGATATTCTCTGACCATTCAG : TTTCAGGACTGAGAACCCTTTCTTTGGAGCTGCACAATCGCATTGGCTTGCTGT</gDNA_template>
            <first_frame> K  R  S  S  I  Q  L  T  F  S  S  V  S  Y  H  *  Y  S  V  S  *  C  S  S  P  R  L  H  H  Q  S  P  S  :  V  P  R  N  V  S  Y  V  M  L  M  E  V  V  A  Q  H  H  *  E  L  Q  A  V  G  S  S  H  H  T  R  F  R  Y  S  L  T  I  Q  :  F  Q  D  *  E  P  F  L  W  S  C  T  I  A  L  A  C  C </first_frame>
            <second_frame>  K  D  L  R  F  N  *  R  F  P  Q  F  H  I  I  N  T  L  F  L  D  V  H  L  R  A  F  I  I  N  L  H  R :   S  L  A  M  F  H  M  S  C  *  W  R  *  L  L  S  I  I  R  S  C  K  Q  L  D  Q  A  I  I  R  G  S  D  I  L  *  P  F  S :   F  R  T  E  N  P  F  F  G  A  A  Q  S  H  W  L  A   </second_frame>
            <third_frame>   K  I  F  D  S  I  N  V  F  L  S  F  I  S  L  I  L  C  F  L  M  F  I  S  A  P  S  S  S  I  S  I   : G  P  S  Q  C  F  I  C  H  A  D  G  G  S  C  S  A  S  L  G  A  A  S  S  W  I  K  P  S  Y  E  V  Q  I  F  S  D  H  S   : V  S  G  L  R  T  L  S  L  E  L  H  N  R  I  G  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33905" stop="33809"/>
                    <exon start="32649" stop="32533"/>
                    <exon start="31574" stop="31522"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>267</number_coding_nucleotides>
                  <number_encoded_amino_acids>89</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KIFDSINVFLSFISLILCFLMFISAPSSSISIGPSQCFICHADGGSCSASLGAASSWIKPSYEVQIFSDHSVSGLRTLSLELHNRIGLL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="36475" PGL_stop="37249"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36475" e_stop="37249"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="36475" e_stop="37249" e_length="775"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36475" stop="37249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707527" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCATAATCATCAGTATTAAGTCCATTAGAGTTTAGTTTTCTTGATGTTAATTGTGGGTTTAATCGATTCTTGATGCATTAGCTGTTAATGGTCATGCGGGGTTTTAGCTATTTGCAAAATCTGTGGCCTTTTTCTGTATTAAACCCCACTGATTTGAGAATTTCAGATGGGTTTGTGAGGAAATTAGGAATACCCGAAACTACCAAACAGTTCGTTTATGCAATTCAAGAACCTGAATCCAAGGCTGTTATATACGTATTGTGTGTGCAGAATTTATCTGAGCGATCTGCTCTAGATGCGGAGTGTTTGATTAGGGAAGTTAAGCCTGAGGCTGTAGTTGTCCAAGTGGGTAATTCTGGAGATGGTCATGAAAATGAGGGAATTGGGTTGAGTGATGGTGGTGATTTAGAGGAGGAGGAGGAGTCGGTACCAACTTCGTCGATTGAGGTTTTGAAGAGGTGTTTTGTGCATAAAACTAGTAAGGAGAAGTATGAGAATATGGCGGGGCGAGTTGTTTTGAGAGAGATATTTGGGGTTGGGTTTGATGGGCATTTCCCTGCTGCCAAGAAAGCAGCTGAAGAGGTTGGTTCGGCTTTCTTGTTGCTTGAGTCACCGTTTGTTCAATGCAGTTTGTCTGGTGAGCCTTCTGATGTGGGGGATGAGGGGTTCGAGAATAAGTTTGGAGTGTTTGGTTTGGAGGACGGGTATGAGAATAGGTTTGGAGTGTTTGGCTTAGAGGCTAGTAATAGTTTGGTTCCTCTAAGGACAGGGTTA</gDNA_template>
            <first_frame> S  I  I  I  S  I  K  S  I  R  V  *  F  S  *  C  *  L  W  V  *  S  I  L  D  A  L  A  V  N  G  H  A  G  F  *  L  F  A  K  S  V  A  F  F  C  I  K  P  H  *  F  E  N  F  R  W  V  C  E  E  I  R  N  T  R  N  Y  Q  T  V  R  L  C  N  S  R  T  *  I  Q  G  C  Y  I  R  I  V  C  A  E  F  I  *  A  I  C  S  R  C  G  V  F  D  *  G  S  *  A  *  G  C  S  C  P  S  G  *  F  W  R  W  S  *  K  *  G  N  W  V  E  *  W  W  *  F  R  G  G  G  G  V  G  T  N  F  V  D  *  G  F  E  E  V  F  C  A  *  N  *  *  G  E  V  *  E  Y  G  G  A  S  C  F  E  R  D  I  W  G  W  V  *  W  A  F  P  C  C  Q  E  S  S  *  R  G  W  F  G  F  L  V  A  *  V  T  V  C  S  M  Q  F  V  W  *  A  F  *  C  G  G  *  G  V  R  E  *  V  W  S  V  W  F  G  G  R  V  *  E  *  V  W  S  V  W  L  R  G  *  *  *  F  G  S  S  K  D  R  V  </first_frame>
            <second_frame>  P  *  S  S  V  L  S  P  L  E  F  S  F  L  D  V  N  C  G  F  N  R  F  L  M  H  *  L  L  M  V  M  R  G  F  S  Y  L  Q  N  L  W  P  F  S  V  L  N  P  T  D  L  R  I  S  D  G  F  V  R  K  L  G  I  P  E  T  T  K  Q  F  V  Y  A  I  Q  E  P  E  S  K  A  V  I  Y  V  L  C  V  Q  N  L  S  E  R  S  A  L  D  A  E  C  L  I  R  E  V  K  P  E  A  V  V  V  Q  V  G  N  S  G  D  G  H  E  N  E  G  I  G  L  S  D  G  G  D  L  E  E  E  E  E  S  V  P  T  S  S  I  E  V  L  K  R  C  F  V  H  K  T  S  K  E  K  Y  E  N  M  A  G  R  V  V  L  R  E  I  F  G  V  G  F  D  G  H  F  P  A  A  K  K  A  A  E  E  V  G  S  A  F  L  L  L  E  S  P  F  V  Q  C  S  L  S  G  E  P  S  D  V  G  D  E  G  F  E  N  K  F  G  V  F  G  L  E  D  G  Y  E  N  R  F  G  V  F  G  L  E  A  S  N  S  L  V  P  L  R  T  G  L </second_frame>
            <third_frame>   H  N  H  Q  Y  *  V  H  *  S  L  V  F  L  M  L  I  V  G  L  I  D  S  *  C  I  S  C  *  W  S  C  G  V  L  A  I  C  K  I  C  G  L  F  L  Y  *  T  P  L  I  *  E  F  Q  M  G  L  *  G  N  *  E  Y  P  K  L  P  N  S  S  F  M  Q  F  K  N  L  N  P  R  L  L  Y  T  Y  C  V  C  R  I  Y  L  S  D  L  L  *  M  R  S  V  *  L  G  K  L  S  L  R  L  *  L  S  K  W  V  I  L  E  M  V  M  K  M  R  E  L  G  *  V  M  V  V  I  *  R  R  R  R  S  R  Y  Q  L  R  R  L  R  F  *  R  G  V  L  C  I  K  L  V  R  R  S  M  R  I  W  R  G  E  L  F  *  E  R  Y  L  G  L  G  L  M  G  I  S  L  L  P  R  K  Q  L  K  R  L  V  R  L  S  C  C  L  S  H  R  L  F  N  A  V  C  L  V  S  L  L  M  W  G  M  R  G  S  R  I  S  L  E  C  L  V  W  R  T  G  M  R  I  G  L  E  C  L  A  *  R  L  V  I  V  W  F  L  *  G  Q  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36557" stop="37249"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>693</number_coding_nucleotides>
                  <number_encoded_amino_acids>231</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLMVMRGFSYLQNLWPFSVLNPTDLRISDGFVRKLGIPETTKQFVYAIQEPESKAVIYVLCVQNLSERSALDAECLIREVKPEAVVVQVGNSGDGHENEGIGLSDGGDLEEEEESVPTSSIEVLKRCFVHKTSKEKYENMAGRVVLREIFGVGFDGHFPAAKKAAEEVGSAFLLLESPFVQCSLSGEPSDVGDEGFENKFGVFGLEDGYENRFGVFGLEASNSLVPLRTGL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="37586" PGL_stop="38665"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="37586" e_stop="38665"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37586" e_stop="38665" e_length="1080"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37586" stop="38403"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727850" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38035" stop="38665"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354574" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38150" stop="38655"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354305" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATAGCTTTGAACAATGCTGGTCGGCTCCCACTTAGCAAAATGGGGAGTCATACAACTGAATTTTCTGAGCTTTGTATTGAGGACAAGTCCCACGCCCTTCTTGCACAGGCCCTCCGAAGCCAGACCGAGAAGTTCAAATCAATAGTTGCAGTAGTAGATGCCAGTGGCTTAGCTGGACTAAGGAAGCACTGGAGTGTTAATGTACCTGAGGAAGTTAAGGAAATTGTTGATCAGCTGGTCACTGACTCTGAAAACGATGGGGACAATTCAAGCCAAAGTGACAAAAAAGGGTTACTAGCTGTTAAGCCAGTGGTAGCTGTTGGGGCTGGTGCAACTGCAGTTCTGGGAGCTTCTTCATTTTCTAAAGTTGTTCCTGCATCTACAATATTGAAGGTTGTCACCTTCAAAGTCCCCGCTTCTCTAAAAATCATGATTACTCAAACCCAAAAGGCCCTTGCTCTTGCATTTGGAAAGTCAAACGTAGCAGGCCCTGCAATGGCAAGTTCTGGTGTCAAATCATCTGTCCTTAAGGCAACTGCTTCTGCAGAGAAAATCCGTGCCATGGCGCATGGCGTTATAGCCTCTGCAGAGAAAACTAGCATCTCAGCCATGAGAACGGCATTCTACGAAATCATGAGGAAACACCGAGTACGACCCGTTGGCTTTCTGCCATGGGCCACCTTTGGATGCAGTGTAGTTACTTGTGCGAGCTTGCTTGTGTATGGAGATGGAATAGAATGTGCTGCTGAATCTCTTCCAGCAGCTCCTTCAATCGCCAGTTTGGGTCGTGGAATCCAAAGTTTGCATCAAGCTTCCCTGGCAGTGAAACAAACAGAAAATTCCAGGATACAAAAGTCAATAGAGTCTCTTGTGTACAGATTTAAGAAGATAAGTATCTCATAAAGTGTTCAGTTCCTTTCTCAAGTACATGAGTCAATAGTTGAGCTCTAACTTTTTCATTCAAATAGATTTTAGCAAAGAGGTTGTGCAATTTCTGATACCTGGGATTTGTCTGTAGCATGGCAAGAAGTTCCAATAAAATGTGATTGGAGTTTGGATGATTTTTCAACATGTTGATTA</gDNA_template>
            <first_frame> I  A  L  N  N  A  G  R  L  P  L  S  K  M  G  S  H  T  T  E  F  S  E  L  C  I  E  D  K  S  H  A  L  L  A  Q  A  L  R  S  Q  T  E  K  F  K  S  I  V  A  V  V  D  A  S  G  L  A  G  L  R  K  H  W  S  V  N  V  P  E  E  V  K  E  I  V  D  Q  L  V  T  D  S  E  N  D  G  D  N  S  S  Q  S  D  K  K  G  L  L  A  V  K  P  V  V  A  V  G  A  G  A  T  A  V  L  G  A  S  S  F  S  K  V  V  P  A  S  T  I  L  K  V  V  T  F  K  V  P  A  S  L  K  I  M  I  T  Q  T  Q  K  A  L  A  L  A  F  G  K  S  N  V  A  G  P  A  M  A  S  S  G  V  K  S  S  V  L  K  A  T  A  S  A  E  K  I  R  A  M  A  H  G  V  I  A  S  A  E  K  T  S  I  S  A  M  R  T  A  F  Y  E  I  M  R  K  H  R  V  R  P  V  G  F  L  P  W  A  T  F  G  C  S  V  V  T  C  A  S  L  L  V  Y  G  D  G  I  E  C  A  A  E  S  L  P  A  A  P  S  I  A  S  L  G  R  G  I  Q  S  L  H  Q  A  S  L  A  V  K  Q  T  E  N  S  R  I  Q  K  S  I  E  S  L  V  Y  R  F  K  K  I  S  I  S  *  S  V  Q  F  L  S  Q  V  H  E  S  I  V  E  L  *  L  F  H  S  N  R  F  *  Q  R  G  C  A  I  S  D  T  W  D  L  S  V  A  W  Q  E  V  P  I  K  C  D  W  S  L  D  D  F  S  T  C  *  L </first_frame>
            <second_frame>  *  L  *  T  M  L  V  G  S  H  L  A  K  W  G  V  I  Q  L  N  F  L  S  F  V  L  R  T  S  P  T  P  F  L  H  R  P  S  E  A  R  P  R  S  S  N  Q  *  L  Q  *  *  M  P  V  A  *  L  D  *  G  S  T  G  V  L  M  Y  L  R  K  L  R  K  L  L  I  S  W  S  L  T  L  K  T  M  G  T  I  Q  A  K  V  T  K  K  G  Y  *  L  L  S  Q  W  *  L  L  G  L  V  Q  L  Q  F  W  E  L  L  H  F  L  K  L  F  L  H  L  Q  Y  *  R  L  S  P  S  K  S  P  L  L  *  K  S  *  L  L  K  P  K  R  P  L  L  L  H  L  E  S  Q  T  *  Q  A  L  Q  W  Q  V  L  V  S  N  H  L  S  L  R  Q  L  L  L  Q  R  K  S  V  P  W  R  M  A  L  *  P  L  Q  R  K  L  A  S  Q  P  *  E  R  H  S  T  K  S  *  G  N  T  E  Y  D  P  L  A  F  C  H  G  P  P  L  D  A  V  *  L  L  V  R  A  C  L  C  M  E  M  E  *  N  V  L  L  N  L  F  Q  Q  L  L  Q  S  P  V  W  V  V  E  S  K  V  C  I  K  L  P  W  Q  *  N  K  Q  K  I  P  G  Y  K  S  Q  *  S  L  L  C  T  D  L  R  R  *  V  S  H  K  V  F  S  S  F  L  K  Y  M  S  Q  *  L  S  S  N  F  F  I  Q  I  D  F  S  K  E  V  V  Q  F  L  I  P  G  I  C  L  *  H  G  K  K  F  Q  *  N  V  I  G  V  W  M  I  F  Q  H  V  D   </second_frame>
            <third_frame>   S  F  E  Q  C  W  S  A  P  T  *  Q  N  G  E  S  Y  N  *  I  F  *  A  L  Y  *  G  Q  V  P  R  P  S  C  T  G  P  P  K  P  D  R  E  V  Q  I  N  S  C  S  S  R  C  Q  W  L  S  W  T  K  E  A  L  E  C  *  C  T  *  G  S  *  G  N  C  *  S  A  G  H  *  L  *  K  R  W  G  Q  F  K  P  K  *  Q  K  R  V  T  S  C  *  A  S  G  S  C  W  G  W  C  N  C  S  S  G  S  F  F  I  F  *  S  C  S  C  I  Y  N  I  E  G  C  H  L  Q  S  P  R  F  S  K  N  H  D  Y  S  N  P  K  G  P  C  S  C  I  W  K  V  K  R  S  R  P  C  N  G  K  F  W  C  Q  I  I  C  P  *  G  N  C  F  C  R  E  N  P  C  H  G  A  W  R  Y  S  L  C  R  E  N  *  H  L  S  H  E  N  G  I  L  R  N  H  E  E  T  P  S  T  T  R  W  L  S  A  M  G  H  L  W  M  Q  C  S  Y  L  C  E  L  A  C  V  W  R  W  N  R  M  C  C  *  I  S  S  S  S  S  F  N  R  Q  F  G  S  W  N  P  K  F  A  S  S  F  P  G  S  E  T  N  R  K  F  Q  D  T  K  V  N  R  V  S  C  V  Q  I  *  E  D  K  Y  L  I  K  C  S  V  P  F  S  S  T  *  V  N  S  *  A  L  T  F  S  F  K  *  I  L  A  K  R  L  C  N  F  *  Y  L  G  F  V  C  S  M  A  R  S  S  N  K  M  *  L  E  F  G  *  F  F  N  M  L  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37586" stop="38488"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>900</number_coding_nucleotides>
                  <number_encoded_amino_acids>300</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IALNNAGRLPLSKMGSHTTEFSELCIEDKSHALLAQALRSQTEKFKSIVAVVDASGLAGLRKHWSVNVPEEVKEIVDQLVTDSENDGDNSSQSDKKGLLAVKPVVAVGAGATAVLGASSFSKVVPASTILKVVTFKVPASLKIMITQTQKALALAFGKSNVAGPAMASSGVKSSVLKATASAEKIRAMAHGVIASAEKTSISAMRTAFYEIMRKHRVRPVGFLPWATFGCSVVTCASLLVYGDGIECAAESLPAAPSIASLGRGIQSLHQASLAVKQTENSRIQKSIESLVYRFKKISIS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="47990" PGL_stop="55324"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47990" e_stop="48305"/>
            <exon e_start="49414" e_stop="49593"/>
            <exon e_start="49968" e_stop="50074"/>
            <exon e_start="51306" e_stop="51511"/>
            <exon e_start="52106" e_stop="52245"/>
            <exon e_start="52876" e_stop="53294"/>
            <exon e_start="55287" e_stop="55324"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.739" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.945" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.698" e_score="1.000"/>
          <exon-only e_score="0.684"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="47990" e_stop="48305" e_length="316"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="48306" i_stop="49413" i_length="1108"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="49414" e_stop="49593" e_length="180"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.994">
            <gDNA_intron_boundary i_start="49594" i_stop="49967" i_length="374"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="49968" e_stop="50074" e_length="107"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.997">
            <gDNA_intron_boundary i_start="50075" i_stop="51305" i_length="1231"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="51306" e_stop="51511" e_length="206"/>
          </exon>
          <intron i_serial="4" don_prob="0.739" acc_prob="0.976">
            <gDNA_intron_boundary i_start="51512" i_stop="52105" i_length="594"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="52106" e_stop="52245" e_length="140"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.945">
            <gDNA_intron_boundary i_start="52246" i_stop="52875" i_length="630"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="52876" e_stop="53294" e_length="419"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.698">
            <gDNA_intron_boundary i_start="53295" i_stop="55286" i_length="1992"/>
          </intron>
          <exon e_serial="7" e_score="0.684">
            <gDNA_exon_boundary e_start="55287" e_stop="55324" e_length="38"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47990" stop="48305"/>
              <exon start="49414" stop="49490"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341400" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48003" stop="48305"/>
              <exon start="49414" stop="49593"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315090" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48006" stop="48305"/>
              <exon start="49414" stop="49593"/>
              <exon start="49968" stop="50033"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315022" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48007" stop="48305"/>
              <exon start="49414" stop="49582"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318942" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48007" stop="48305"/>
              <exon start="49414" stop="49524"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318946" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48102" stop="48305"/>
              <exon start="49414" stop="49593"/>
              <exon start="49968" stop="50074"/>
              <exon start="51306" stop="51347"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205007" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48102" stop="48305"/>
              <exon start="49414" stop="49593"/>
              <exon start="49968" stop="50063"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205006" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49459" stop="49593"/>
              <exon start="49968" stop="50074"/>
              <exon start="51306" stop="51511"/>
              <exon start="52106" stop="52135"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284250" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50014" stop="50074"/>
              <exon start="51306" stop="51511"/>
              <exon start="52106" stop="52245"/>
              <exon start="52876" stop="53089"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251295" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50015" stop="50074"/>
              <exon start="51306" stop="51511"/>
              <exon start="52106" stop="52245"/>
              <exon start="52876" stop="53103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348030" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51328" stop="51511"/>
              <exon start="52106" stop="52245"/>
              <exon start="52876" stop="53293"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E553684" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51430" stop="51511"/>
              <exon start="52106" stop="52245"/>
              <exon start="52876" stop="53294"/>
              <exon start="55287" stop="55324"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349589" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAGAAAAAAGGCAAGCAAATAGCAATTGAAAGCTGCTCTGTTTTGCTTCACCTATCTGCTTCTGCAAATCCGGCCATTTCTGTGTATATATATAGATAGAAGGTGAAAAGGATGATGTGGGTTCGATCGATTCGGCGGCCATTATCGTCGTTGGTTCTACTTCAGTCGCGTGCCCCGAATTATTCCTCATTGTCAGCTTCAGCAGCTGCAGTAGAAGCGGAACGATGTATAAAGGAAGGACCCAGAAATAACTGGACTAGAGATGAAATCAAGTCTATTTACGATTCACCACTCCTCGATCTCCTCTTTCATGGC : GCTCAAGTACATAGACATTCTCATAACTTTAGAGAAGTACAGCAGTGCACTTTGCTGTCTATTAAGACAGGGGGATGCAGTGAAGATTGTTCGTATTGTCCTCAATCGTCTAGGTACAACACAGGACTGAAAGCACAGAAACTTATGAATAAGGATGCAGTCTTGGAAGCAGCAAGAAAG : GCAAAAGAGGGAGGTAGCACTCGTTTTTGTATGGGTGCTGCATGGAGGGATACAATAGGAAGGAAAACCAATATGAACCAGATCGTCGAGTATGTGAAGGAAATAAG : GGACATGGGAATGGAGGTTTGCTGCACCTTGGGAATGCTTGAGAAGCAGCAAGCTTTAGAGCTCAAGAAAGCTGGTCTAACAGCATACAATCACAATCTTGACACCTCAAGAGAATACTATCCTAATATTATAACCACTAGAACTTATGATGAGCGGCTGGAAACTCTTAAGCATGTACGCGAAGCAGGAATTAATGTGTGTTCAG : GTGGAATAATAGGGCTCGGTGAGGCTGAAGAGGATAGAATTGGTTTGTTGCATACCCTGTCAACTCTTCCAACTCACCCTGAGAGTGTGCCGATTAATGCACTTATTGCAGTAAAAGGTACACCATTGGAAGACCAGAAG : CCAGTGGACATATGGGATATGATTAGGATGATTTCGACAGCAAGAATAACAATGCCAGGTGCAATGGTTAGGCTTTCTGCAGGAAGAGTTCGTTTTTCTGTCCCCGAGCAGGCTCTTTGTTTCCTTGCTGGTGCCAATTCCATCTTTACAGGTGAGAAGTTGTTGACTACACCAAATAATGACTATGATGCTGATCAGAATATGTTCAAATTACTTGGACTTGTTCCTAAAGCTCCAAATTTCTCTGAGGATGAAAAAGATTCTGAAGACGAAAAGATGGAAGCATCTGTTTAGACTTTAGTTTAGTTCATTCTGTAATGATCAACCAGAGATCTATCTTTTTACTTAAATGTATGACTCTCCTCTTGAAATTTTACCATGATTCTAAGCTTTTTAATGTACCTACCATGTTTTCATTT : AAAAATGTAAAAAATTCAAATTTCAACAAAAAAAGAAA</gDNA_template>
            <first_frame> *  E  K  R  Q  A  N  S  N  *  K  L  L  C  F  A  S  P  I  C  F  C  K  S  G  H  F  C  V  Y  I  *  I  E  G  E  K  D  D  V  G  S  I  D  S  A  A  I  I  V  V  G  S  T  S  V  A  C  P  E  L  F  L  I  V  S  F  S  S  C  S  R  S  G  T  M  Y  K  G  R  T  Q  K  *  L  D  *  R  *  N  Q  V  Y  L  R  F  T  T  P  R  S  P  L  S  W   : R  S  S  T  *  T  F  S  *  L  *  R  S  T  A  V  H  F  A  V  Y  *  D  R  G  M  Q  *  R  L  F  V  L  S  S  I  V  *  V  Q  H  R  T  E  S  T  E  T  Y  E  *  G  C  S  L  G  S  S  K  K   : G  K  R  G  R  *  H  S  F  L  Y  G  C  C  M  E  G  Y  N  R  K  E  N  Q  Y  E  P  D  R  R  V  C  E  G  N  K  :  G  H  G  N  G  G  L  L  H  L  G  N  A  *  E  A  A  S  F  R  A  Q  E  S  W  S  N  S  I  Q  S  Q  S  *  H  L  K  R  I  L  S  *  Y  Y  N  H  *  N  L  *  *  A  A  G  N  S  *  A  C  T  R  S  R  N  *  C  V  F  R :   W  N  N  R  A  R  *  G  *  R  G  *  N  W  F  V  A  Y  P  V  N  S  S  N  S  P  *  E  C  A  D  *  C  T  Y  C  S  K  R  Y  T  I  G  R  P  E   : A  S  G  H  M  G  Y  D  *  D  D  F  D  S  K  N  N  N  A  R  C  N  G  *  A  F  C  R  K  S  S  F  F  C  P  R  A  G  S  L  F  P  C  W  C  Q  F  H  L  Y  R  *  E  V  V  D  Y  T  K  *  *  L  *  C  *  S  E  Y  V  Q  I  T  W  T  C  S  *  S  S  K  F  L  *  G  *  K  R  F  *  R  R  K  D  G  S  I  C  L  D  F  S  L  V  H  S  V  M  I  N  Q  R  S  I  F  L  L  K  C  M  T  L  L  L  K  F  Y  H  D  S  K  L  F  N  V  P  T  M  F  S  F  :  K  N  V  K  N  S  N  F  N  K  K  R   </first_frame>
            <second_frame>  E  K  K  G  K  Q  I  A  I  E  S  C  S  V  L  L  H  L  S  A  S  A  N  P  A  I  S  V  Y  I  Y  R  *  K  V  K  R  M  M  W  V  R  S  I  R  R  P  L  S  S  L  V  L  L  Q  S  R  A  P  N  Y  S  S  L  S  A  S  A  A  A  V  E  A  E  R  C  I  K  E  G  P  R  N  N  W  T  R  D  E  I  K  S  I  Y  D  S  P  L  L  D  L  L  F  H  G  :  A  Q  V  H  R  H  S  H  N  F  R  E  V  Q  Q  C  T  L  L  S  I  K  T  G  G  C  S  E  D  C  S  Y  C  P  Q  S  S  R  Y  N  T  G  L  K  A  Q  K  L  M  N  K  D  A  V  L  E  A  A  R  K  :  A  K  E  G  G  S  T  R  F  C  M  G  A  A  W  R  D  T  I  G  R  K  T  N  M  N  Q  I  V  E  Y  V  K  E  I  R :   D  M  G  M  E  V  C  C  T  L  G  M  L  E  K  Q  Q  A  L  E  L  K  K  A  G  L  T  A  Y  N  H  N  L  D  T  S  R  E  Y  Y  P  N  I  I  T  T  R  T  Y  D  E  R  L  E  T  L  K  H  V  R  E  A  G  I  N  V  C  S   : G  G  I  I  G  L  G  E  A  E  E  D  R  I  G  L  L  H  T  L  S  T  L  P  T  H  P  E  S  V  P  I  N  A  L  I  A  V  K  G  T  P  L  E  D  Q  K  :  P  V  D  I  W  D  M  I  R  M  I  S  T  A  R  I  T  M  P  G  A  M  V  R  L  S  A  G  R  V  R  F  S  V  P  E  Q  A  L  C  F  L  A  G  A  N  S  I  F  T  G  E  K  L  L  T  T  P  N  N  D  Y  D  A  D  Q  N  M  F  K  L  L  G  L  V  P  K  A  P  N  F  S  E  D  E  K  D  S  E  D  E  K  M  E  A  S  V  *  T  L  V  *  F  I  L  *  *  S  T  R  D  L  S  F  Y  L  N  V  *  L  S  S  *  N  F  T  M  I  L  S  F  L  M  Y  L  P  C  F  H  L :   K  M  *  K  I  Q  I  S  T  K  K  E  </second_frame>
            <third_frame>   R  K  K  A  S  K  *  Q  L  K  A  A  L  F  C  F  T  Y  L  L  L  Q  I  R  P  F  L  C  I  Y  I  D  R  R  *  K  G  *  C  G  F  D  R  F  G  G  H  Y  R  R  W  F  Y  F  S  R  V  P  R  I  I  P  H  C  Q  L  Q  Q  L  Q  *  K  R  N  D  V  *  R  K  D  P  E  I  T  G  L  E  M  K  S  S  L  F  T  I  H  H  S  S  I  S  S  F  M  A :   L  K  Y  I  D  I  L  I  T  L  E  K  Y  S  S  A  L  C  C  L  L  R  Q  G  D  A  V  K  I  V  R  I  V  L  N  R  L  G  T  T  Q  D  *  K  H  R  N  L  *  I  R  M  Q  S  W  K  Q  Q  E  R :   Q  K  R  E  V  A  L  V  F  V  W  V  L  H  G  G  I  Q  *  E  G  K  P  I  *  T  R  S  S  S  M  *  R  K  *   : G  T  W  E  W  R  F  A  A  P  W  E  C  L  R  S  S  K  L  *  S  S  R  K  L  V  *  Q  H  T  I  T  I  L  T  P  Q  E  N  T  I  L  I  L  *  P  L  E  L  M  M  S  G  W  K  L  L  S  M  Y  A  K  Q  E  L  M  C  V  Q  :  V  E  *  *  G  S  V  R  L  K  R  I  E  L  V  C  C  I  P  C  Q  L  F  Q  L  T  L  R  V  C  R  L  M  H  L  L  Q  *  K  V  H  H  W  K  T  R  S :   Q  W  T  Y  G  I  *  L  G  *  F  R  Q  Q  E  *  Q  C  Q  V  Q  W  L  G  F  L  Q  E  E  F  V  F  L  S  P  S  R  L  F  V  S  L  L  V  P  I  P  S  L  Q  V  R  S  C  *  L  H  Q  I  M  T  M  M  L  I  R  I  C  S  N  Y  L  D  L  F  L  K  L  Q  I  S  L  R  M  K  K  I  L  K  T  K  R  W  K  H  L  F  R  L  *  F  S  S  F  C  N  D  Q  P  E  I  Y  L  F  T  *  M  Y  D  S  P  L  E  I  L  P  *  F  *  A  F  *  C  T  Y  H  V  F  I   : *  K  C  K  K  F  K  F  Q  Q  K  K  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48090" stop="48305"/>
                    <exon start="49414" stop="49593"/>
                    <exon start="49968" stop="50074"/>
                    <exon start="51306" stop="51511"/>
                    <exon start="52106" stop="52245"/>
                    <exon start="52876" stop="53169"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1140</number_coding_nucleotides>
                  <number_encoded_amino_acids>380</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KVKRMMWVRSIRRPLSSLVLLQSRAPNYSSLSASAAAVEAERCIKEGPRNNWTRDEIKSIYDSPLLDLLFHGAQVHRHSHNFREVQQCTLLSIKTGGCSEDCSYCPQSSRYNTGLKAQKLMNKDAVLEAARKAKEGGSTRFCMGAAWRDTIGRKTNMNQIVEYVKEIRDMGMEVCCTLGMLEKQQALELKKAGLTAYNHNLDTSREYYPNIITTRTYDERLETLKHVREAGINVCSGGIIGLGEAEEDRIGLLHTLSTLPTHPESVPINALIAVKGTPLEDQKPVDIWDMIRMISTARITMPGAMVRLSAGRVRFSVPEQALCFLAGANSIFTGEKLLTTPNNDYDADQNMFKLLGLVPKAPNFSEDEKDSEDEKMEASV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="47990" e_stop="48305"/>
            <exon e_start="49414" e_stop="49593"/>
            <exon e_start="49968" e_stop="50074"/>
            <exon e_start="51306" e_stop="51511"/>
            <exon e_start="52106" e_stop="52245"/>
            <exon e_start="52876" e_stop="53273"/>
            <exon e_start="54756" e_stop="54821"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.739" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.945" e_score="1.000"/>
          <exon-intron don_prob="0.015" acc_prob="0.000" e_score="0.997"/>
          <exon-only e_score="0.545"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="47990" e_stop="48305" e_length="316"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="48306" i_stop="49413" i_length="1108"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="49414" e_stop="49593" e_length="180"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.994">
            <gDNA_intron_boundary i_start="49594" i_stop="49967" i_length="374"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="49968" e_stop="50074" e_length="107"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.997">
            <gDNA_intron_boundary i_start="50075" i_stop="51305" i_length="1231"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="51306" e_stop="51511" e_length="206"/>
          </exon>
          <intron i_serial="4" don_prob="0.739" acc_prob="0.976">
            <gDNA_intron_boundary i_start="51512" i_stop="52105" i_length="594"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="52106" e_stop="52245" e_length="140"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.945">
            <gDNA_intron_boundary i_start="52246" i_stop="52875" i_length="630"/>
          </intron>
          <exon e_serial="6" e_score="0.997">
            <gDNA_exon_boundary e_start="52876" e_stop="53273" e_length="398"/>
          </exon>
          <intron i_serial="6" don_prob="0.015" acc_prob="0.000">
            <gDNA_intron_boundary i_start="53274" i_stop="54755" i_length="1482"/>
          </intron>
          <exon e_serial="7" e_score="0.545">
            <gDNA_exon_boundary e_start="54756" e_stop="54821" e_length="66"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47990" stop="48305"/>
              <exon start="49414" stop="49490"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341400" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48003" stop="48305"/>
              <exon start="49414" stop="49593"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315090" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48006" stop="48305"/>
              <exon start="49414" stop="49593"/>
              <exon start="49968" stop="50033"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315022" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48007" stop="48305"/>
              <exon start="49414" stop="49582"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318942" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48007" stop="48305"/>
              <exon start="49414" stop="49524"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318946" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48102" stop="48305"/>
              <exon start="49414" stop="49593"/>
              <exon start="49968" stop="50074"/>
              <exon start="51306" stop="51347"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205007" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48102" stop="48305"/>
              <exon start="49414" stop="49593"/>
              <exon start="49968" stop="50063"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205006" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49459" stop="49593"/>
              <exon start="49968" stop="50074"/>
              <exon start="51306" stop="51511"/>
              <exon start="52106" stop="52135"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284250" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50014" stop="50074"/>
              <exon start="51306" stop="51511"/>
              <exon start="52106" stop="52245"/>
              <exon start="52876" stop="53089"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251295" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50015" stop="50074"/>
              <exon start="51306" stop="51511"/>
              <exon start="52106" stop="52245"/>
              <exon start="52876" stop="53103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348030" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51414" stop="51511"/>
              <exon start="52106" stop="52245"/>
              <exon start="52876" stop="53273"/>
              <exon start="54756" stop="54821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733183" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAGAAAAAAGGCAAGCAAATAGCAATTGAAAGCTGCTCTGTTTTGCTTCACCTATCTGCTTCTGCAAATCCGGCCATTTCTGTGTATATATATAGATAGAAGGTGAAAAGGATGATGTGGGTTCGATCGATTCGGCGGCCATTATCGTCGTTGGTTCTACTTCAGTCGCGTGCCCCGAATTATTCCTCATTGTCAGCTTCAGCAGCTGCAGTAGAAGCGGAACGATGTATAAAGGAAGGACCCAGAAATAACTGGACTAGAGATGAAATCAAGTCTATTTACGATTCACCACTCCTCGATCTCCTCTTTCATGGC : GCTCAAGTACATAGACATTCTCATAACTTTAGAGAAGTACAGCAGTGCACTTTGCTGTCTATTAAGACAGGGGGATGCAGTGAAGATTGTTCGTATTGTCCTCAATCGTCTAGGTACAACACAGGACTGAAAGCACAGAAACTTATGAATAAGGATGCAGTCTTGGAAGCAGCAAGAAAG : GCAAAAGAGGGAGGTAGCACTCGTTTTTGTATGGGTGCTGCATGGAGGGATACAATAGGAAGGAAAACCAATATGAACCAGATCGTCGAGTATGTGAAGGAAATAAG : GGACATGGGAATGGAGGTTTGCTGCACCTTGGGAATGCTTGAGAAGCAGCAAGCTTTAGAGCTCAAGAAAGCTGGTCTAACAGCATACAATCACAATCTTGACACCTCAAGAGAATACTATCCTAATATTATAACCACTAGAACTTATGATGAGCGGCTGGAAACTCTTAAGCATGTACGCGAAGCAGGAATTAATGTGTGTTCAG : GTGGAATAATAGGGCTCGGTGAGGCTGAAGAGGATAGAATTGGTTTGTTGCATACCCTGTCAACTCTTCCAACTCACCCTGAGAGTGTGCCGATTAATGCACTTATTGCAGTAAAAGGTACACCATTGGAAGACCAGAAG : CCAGTGGACATATGGGATATGATTAGGATGATTTCGACAGCAAGAATAACAATGCCAGGTGCAATGGTTAGGCTTTCTGCAGGAAGAGTTCGTTTTTCTGTCCCCGAGCAGGCTCTTTGTTTCCTTGCTGGTGCCAATTCCATCTTTACAGGTGAGAAGTTGTTGACTACACCAAATAATGACTATGATGCTGATCAGAATATGTTCAAATTACTTGGACTTGTTCCTAAAGCTCCAAATTTCTCTGAGGATGAAAAAGATTCTGAAGACGAAAAGATGGAAGCATCTGTTTAGACTTTAGTTTAGTTCATTCTGTAATGATCAACCAGAGATCTATCTTTTTACTTAAATGTATGACTCTCCTCTTGAAATTTTACCATGATTCTAAGCTTTTTAAT : GAAAAAAATATTATAAAAGAAAAAAGAACTACATAATAAATAATAAAGATTTATAAAGTGAATTGC</gDNA_template>
            <first_frame> *  E  K  R  Q  A  N  S  N  *  K  L  L  C  F  A  S  P  I  C  F  C  K  S  G  H  F  C  V  Y  I  *  I  E  G  E  K  D  D  V  G  S  I  D  S  A  A  I  I  V  V  G  S  T  S  V  A  C  P  E  L  F  L  I  V  S  F  S  S  C  S  R  S  G  T  M  Y  K  G  R  T  Q  K  *  L  D  *  R  *  N  Q  V  Y  L  R  F  T  T  P  R  S  P  L  S  W   : R  S  S  T  *  T  F  S  *  L  *  R  S  T  A  V  H  F  A  V  Y  *  D  R  G  M  Q  *  R  L  F  V  L  S  S  I  V  *  V  Q  H  R  T  E  S  T  E  T  Y  E  *  G  C  S  L  G  S  S  K  K   : G  K  R  G  R  *  H  S  F  L  Y  G  C  C  M  E  G  Y  N  R  K  E  N  Q  Y  E  P  D  R  R  V  C  E  G  N  K  :  G  H  G  N  G  G  L  L  H  L  G  N  A  *  E  A  A  S  F  R  A  Q  E  S  W  S  N  S  I  Q  S  Q  S  *  H  L  K  R  I  L  S  *  Y  Y  N  H  *  N  L  *  *  A  A  G  N  S  *  A  C  T  R  S  R  N  *  C  V  F  R :   W  N  N  R  A  R  *  G  *  R  G  *  N  W  F  V  A  Y  P  V  N  S  S  N  S  P  *  E  C  A  D  *  C  T  Y  C  S  K  R  Y  T  I  G  R  P  E   : A  S  G  H  M  G  Y  D  *  D  D  F  D  S  K  N  N  N  A  R  C  N  G  *  A  F  C  R  K  S  S  F  F  C  P  R  A  G  S  L  F  P  C  W  C  Q  F  H  L  Y  R  *  E  V  V  D  Y  T  K  *  *  L  *  C  *  S  E  Y  V  Q  I  T  W  T  C  S  *  S  S  K  F  L  *  G  *  K  R  F  *  R  R  K  D  G  S  I  C  L  D  F  S  L  V  H  S  V  M  I  N  Q  R  S  I  F  L  L  K  C  M  T  L  L  L  K  F  Y  H  D  S  K  L  F  N  :  E  K  N  I  I  K  E  K  R  T  T  *  *  I  I  K  I  Y  K  V  N  C </first_frame>
            <second_frame>  E  K  K  G  K  Q  I  A  I  E  S  C  S  V  L  L  H  L  S  A  S  A  N  P  A  I  S  V  Y  I  Y  R  *  K  V  K  R  M  M  W  V  R  S  I  R  R  P  L  S  S  L  V  L  L  Q  S  R  A  P  N  Y  S  S  L  S  A  S  A  A  A  V  E  A  E  R  C  I  K  E  G  P  R  N  N  W  T  R  D  E  I  K  S  I  Y  D  S  P  L  L  D  L  L  F  H  G  :  A  Q  V  H  R  H  S  H  N  F  R  E  V  Q  Q  C  T  L  L  S  I  K  T  G  G  C  S  E  D  C  S  Y  C  P  Q  S  S  R  Y  N  T  G  L  K  A  Q  K  L  M  N  K  D  A  V  L  E  A  A  R  K  :  A  K  E  G  G  S  T  R  F  C  M  G  A  A  W  R  D  T  I  G  R  K  T  N  M  N  Q  I  V  E  Y  V  K  E  I  R :   D  M  G  M  E  V  C  C  T  L  G  M  L  E  K  Q  Q  A  L  E  L  K  K  A  G  L  T  A  Y  N  H  N  L  D  T  S  R  E  Y  Y  P  N  I  I  T  T  R  T  Y  D  E  R  L  E  T  L  K  H  V  R  E  A  G  I  N  V  C  S   : G  G  I  I  G  L  G  E  A  E  E  D  R  I  G  L  L  H  T  L  S  T  L  P  T  H  P  E  S  V  P  I  N  A  L  I  A  V  K  G  T  P  L  E  D  Q  K  :  P  V  D  I  W  D  M  I  R  M  I  S  T  A  R  I  T  M  P  G  A  M  V  R  L  S  A  G  R  V  R  F  S  V  P  E  Q  A  L  C  F  L  A  G  A  N  S  I  F  T  G  E  K  L  L  T  T  P  N  N  D  Y  D  A  D  Q  N  M  F  K  L  L  G  L  V  P  K  A  P  N  F  S  E  D  E  K  D  S  E  D  E  K  M  E  A  S  V  *  T  L  V  *  F  I  L  *  *  S  T  R  D  L  S  F  Y  L  N  V  *  L  S  S  *  N  F  T  M  I  L  S  F  L  M :   K  K  I  L  *  K  K  K  E  L  H  N  K  *  *  R  F  I  K  *  I   </second_frame>
            <third_frame>   R  K  K  A  S  K  *  Q  L  K  A  A  L  F  C  F  T  Y  L  L  L  Q  I  R  P  F  L  C  I  Y  I  D  R  R  *  K  G  *  C  G  F  D  R  F  G  G  H  Y  R  R  W  F  Y  F  S  R  V  P  R  I  I  P  H  C  Q  L  Q  Q  L  Q  *  K  R  N  D  V  *  R  K  D  P  E  I  T  G  L  E  M  K  S  S  L  F  T  I  H  H  S  S  I  S  S  F  M  A :   L  K  Y  I  D  I  L  I  T  L  E  K  Y  S  S  A  L  C  C  L  L  R  Q  G  D  A  V  K  I  V  R  I  V  L  N  R  L  G  T  T  Q  D  *  K  H  R  N  L  *  I  R  M  Q  S  W  K  Q  Q  E  R :   Q  K  R  E  V  A  L  V  F  V  W  V  L  H  G  G  I  Q  *  E  G  K  P  I  *  T  R  S  S  S  M  *  R  K  *   : G  T  W  E  W  R  F  A  A  P  W  E  C  L  R  S  S  K  L  *  S  S  R  K  L  V  *  Q  H  T  I  T  I  L  T  P  Q  E  N  T  I  L  I  L  *  P  L  E  L  M  M  S  G  W  K  L  L  S  M  Y  A  K  Q  E  L  M  C  V  Q  :  V  E  *  *  G  S  V  R  L  K  R  I  E  L  V  C  C  I  P  C  Q  L  F  Q  L  T  L  R  V  C  R  L  M  H  L  L  Q  *  K  V  H  H  W  K  T  R  S :   Q  W  T  Y  G  I  *  L  G  *  F  R  Q  Q  E  *  Q  C  Q  V  Q  W  L  G  F  L  Q  E  E  F  V  F  L  S  P  S  R  L  F  V  S  L  L  V  P  I  P  S  L  Q  V  R  S  C  *  L  H  Q  I  M  T  M  M  L  I  R  I  C  S  N  Y  L  D  L  F  L  K  L  Q  I  S  L  R  M  K  K  I  L  K  T  K  R  W  K  H  L  F  R  L  *  F  S  S  F  C  N  D  Q  P  E  I  Y  L  F  T  *  M  Y  D  S  P  L  E  I  L  P  *  F  *  A  F  *   : *  K  K  Y  Y  K  R  K  K  N  Y  I  I  N  N  K  D  L  *  S  E  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48090" stop="48305"/>
                    <exon start="49414" stop="49593"/>
                    <exon start="49968" stop="50074"/>
                    <exon start="51306" stop="51511"/>
                    <exon start="52106" stop="52245"/>
                    <exon start="52876" stop="53169"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1140</number_coding_nucleotides>
                  <number_encoded_amino_acids>380</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KVKRMMWVRSIRRPLSSLVLLQSRAPNYSSLSASAAAVEAERCIKEGPRNNWTRDEIKSIYDSPLLDLLFHGAQVHRHSHNFREVQQCTLLSIKTGGCSEDCSYCPQSSRYNTGLKAQKLMNKDAVLEAARKAKEGGSTRFCMGAAWRDTIGRKTNMNQIVEYVKEIRDMGMEVCCTLGMLEKQQALELKKAGLTAYNHNLDTSREYYPNIITTRTYDERLETLKHVREAGINVCSGGIIGLGEAEEDRIGLLHTLSTLPTHPESVPINALIAVKGTPLEDQKPVDIWDMIRMISTARITMPGAMVRLSAGRVRFSVPEQALCFLAGANSIFTGEKLLTTPNNDYDADQNMFKLLGLVPKAPNFSEDEKDSEDEKMEASV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="54781" PGL_stop="52869"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="54781" e_stop="54727"/>
            <exon e_start="53277" e_stop="52869"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.560" e_score="0.691"/>
          <exon-only e_score="0.941"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.691">
            <gDNA_exon_boundary e_start="54781" e_stop="54727" e_length="55"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.560">
            <gDNA_intron_boundary i_start="54726" i_stop="53278" i_length="1449"/>
          </intron>
          <exon e_serial="2" e_score="0.941">
            <gDNA_exon_boundary e_start="53277" e_stop="52869" e_length="409"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54781" stop="54727"/>
              <exon start="53277" stop="52869"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622063" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53259" stop="52877"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419445" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTTTTTCTTTTATAATATTTTTTTCTCTATATACTTAATCTCTTCATACACATG : GTACATTAAAAAGCTTAGAATCATGGTAAAATTTCAAGAGGAGAGTCATACATTTAAGTAAAAAGATAGATCTCTGGTTGATCATTACAGAATGAACTAAACTAAAGTCTAAACAGATGCTTCCATCTTTTCGTCTTCAGAATCTTTTTCATCCTCAGAGAAATTTGGAGCTTTAGGAACAAGTCCAAGTAATTTGAACATATTCTGATCAGCATCATAGTCATTATTTGGTGTAGTCAACAACTTCTCACCTGTAAAGATGGAATTGGCACCAGCAAGGAAACAAAGAGCCTGCTCGGGGACAGAAAAACGAACTCTTCCTGCAGAAAGCCTAACCATTGCACCTGGCATTGTTATTCTTGCTGTCGAAATCATCCTAATCATATCCCATATGTCCACTGGCTGGAAG</gDNA_template>
            <first_frame> L  F  S  F  I  I  F  F  S  L  Y  T  *  S  L  H  T  H   : G  T  L  K  S  L  E  S  W  *  N  F  K  R  R  V  I  H  L  S  K  K  I  D  L  W  L  I  I  T  E  *  T  K  L  K  S  K  Q  M  L  P  S  F  R  L  Q  N  L  F  H  P  Q  R  N  L  E  L  *  E  Q  V  Q  V  I  *  T  Y  S  D  Q  H  H  S  H  Y  L  V  *  S  T  T  S  H  L  *  R  W  N  W  H  Q  Q  G  N  K  E  P  A  R  G  Q  K  N  E  L  F  L  Q  K  A  *  P  L  H  L  A  L  L  F  L  L  S  K  S  S  *  S  Y  P  I  C  P  L  A  G   </first_frame>
            <second_frame>  F  F  L  L  *  Y  F  F  L  Y  I  L  N  L  F  I  H  M  :  V  H  *  K  A  *  N  H  G  K  I  S  R  G  E  S  Y  I  *  V  K  R  *  I  S  G  *  S  L  Q  N  E  L  N  *  S  L  N  R  C  F  H  L  F  V  F  R  I  F  F  I  L  R  E  I  W  S  F  R  N  K  S  K  *  F  E  H  I  L  I  S  I  I  V  I  I  W  C  S  Q  Q  L  L  T  C  K  D  G  I  G  T  S  K  E  T  K  S  L  L  G  D  R  K  T  N  S  S  C  R  K  P  N  H  C  T  W  H  C  Y  S  C  C  R  N  H  P  N  H  I  P  Y  V  H  W  L  E  </second_frame>
            <third_frame>   F  F  F  Y  N  I  F  F  S  I  Y  L  I  S  S  Y  T  W :   Y  I  K  K  L  R  I  M  V  K  F  Q  E  E  S  H  T  F  K  *  K  D  R  S  L  V  D  H  Y  R  M  N  *  T  K  V  *  T  D  A  S  I  F  S  S  S  E  S  F  S  S  S  E  K  F  G  A  L  G  T  S  P  S  N  L  N  I  F  *  S  A  S  *  S  L  F  G  V  V  N  N  F  S  P  V  K  M  E  L  A  P  A  R  K  Q  R  A  C  S  G  T  E  K  R  T  L  P  A  E  S  L  T  I  A  P  G  I  V  I  L  A  V  E  I  I  L  I  I  S  H  M  S  T  G  W  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53085" stop="52870"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FEHILISIIVIIWCSQQLLTCKDGIGTSKETKSLLGDRKTNSSCRKPNHCTWHCYSCCRNHPNHIPYVHWLE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="55418" PGL_stop="60915"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="55418" e_stop="55700"/>
            <exon e_start="56825" e_stop="56901"/>
            <exon e_start="57675" e_stop="57736"/>
            <exon e_start="57835" e_stop="57953"/>
            <exon e_start="58738" e_stop="58905"/>
            <exon e_start="59145" e_stop="59480"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.942" e_score="0.993"/>
          <exon-intron don_prob="0.996" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.764" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.982"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="55418" e_stop="55700" e_length="283"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.942">
            <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="56825" e_stop="56901" e_length="77"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.991">
            <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="57675" e_stop="57736" e_length="62"/>
          </exon>
          <intron i_serial="3" don_prob="0.764" acc_prob="0.000">
            <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="57835" e_stop="57953" e_length="119"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.997">
            <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="58738" e_stop="58905" e_length="168"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239"/>
          </intron>
          <exon e_serial="6" e_score="0.982">
            <gDNA_exon_boundary e_start="59145" e_stop="59480" e_length="336"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55418" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59255"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723194" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55572" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E724423" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55574" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59422"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E718464" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55588" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59402"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E711367" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55601" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59295"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459694" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55604" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59353"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465734" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55615" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57865"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201450" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55619" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55623" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57853"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338284" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55627" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405513" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55635" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270713" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55647" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59347"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355005" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55671" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59391"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E429485" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55671" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59390"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E429484" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55671" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59361"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457363" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55673" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59429"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350578" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55673" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59311"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351639" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59365"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606082" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59287"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57718" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59391"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354827" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57878" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59391"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355021" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57882" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59297"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239498" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57922" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59480"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713723" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57922" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59480"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57922" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59480"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57928" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59377"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265548" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59446"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E695090" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGAAGAACAACAACTACCAAAATTAAGAGCACATTTTCCTAATTAAAGTAATAAATTTCGCTTTCATTGCCAAATATCTTGTTTGATTTTGATTACCCCATTTAATTAATTTTTTTTTTGACTTATATATGCATAGGTTAGATAGAATAAGAAGATGCTGAGTTTCACCAATTTAGCTGCTCTTTTCTTTCTTGTTCTTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAG : GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATG : TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG : GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG : ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG : AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAGGATGTCTTGCGTAGGTAAACTGATTA</gDNA_template>
            <first_frame> G  R  T  T  T  T  K  I  K  S  T  F  S  *  L  K  *  *  I  S  L  S  L  P  N  I  L  F  D  F  D  Y  P  I  *  L  I  F  F  L  T  Y  I  C  I  G  *  I  E  *  E  D  A  E  F  H  Q  F  S  C  S  F  L  S  C  S  C  F  V  L  V  L  *  I  P  I  F  F  S  Y  G  *  R  I  T  K  I  Y  L  *  F  H  C  E   : G  Y  T  G  K  *  G  T  F  E  Q  L  *  G  K  G  S  P  Y  C  Q  C  C  I  K  M  :  W  F  N  R  F  K  L  Q  G  A  E  Y  F  V  *  E  V  Q  R  S  R :   F  *  N  F  S  I  S  L  *  P  V  P  V  A  R  T  R  N  K  *  G  D  S  A  N  C  M  H  Q  V  Q  S  *  I  P  C  I  *  K   : D  *  C  E  R  G  *  C  C  T  T  L  Q  V  L  E  I  R  K  R  R  F  P  W  K  C  C  Q  V  E  L  H  Q  I  P  C  G  Q  R  R  K  G  C  G  T  I  C  T  Q  D  T  T  S  S  V  *   : E  R  H  K  K  S  V  G  C  G  L  S  T  T  G  V  K  V  Q  H  M  Y  *  P  S  V  G  S  A  F  M  V  L  S  F  S  F  F  P  A  Y  E  T  S  E  L  V  P  H  P  L  S  F  S  L  L  M  Y  F  G  C  V  N  S  F  I  A  M  N  L  *  *  K  L  H  S  S  C  F  N  D  S  G  L  *  L  L  D  I  Q  V  C  Y  R  L  N  N  K  K  *  V  V  C  R  M  S  C  V  G  K  L  I  </first_frame>
            <second_frame>  E  E  Q  Q  L  P  K  L  R  A  H  F  P  N  *  S  N  K  F  R  F  H  C  Q  I  S  C  L  I  L  I  T  P  F  N  *  F  F  F  *  L  I  Y  A  *  V  R  *  N  K  K  M  L  S  F  T  N  L  A  A  L  F  F  L  V  L  A  L  F  L  F  Y  R  Y  P  S  F  S  L  M  A  E  G  S  P  K  S  I  Y  D  F  T  V  K  :  D  I  Q  G  N  E  V  P  L  S  N  Y  R  G  K  V  L  L  I  V  N  V  A  S  K  C :   G  L  T  D  S  N  Y  K  E  L  N  I  L  Y  E  K  Y  K  D  Q   : G  F  E  I  L  A  F  P  C  N  Q  F  L  W  Q  E  P  G  T  N  E  E  I  Q  Q  T  V  C  T  R  F  K  A  E  F  P  V  F  E  K  :  I  D  V  N  G  D  N  A  A  P  L  Y  K  F  L  K  S  E  K  G  G  F  L  G  S  A  V  K  W  N  F  T  K  F  L  V  D  K  E  G  K  V  V  E  R  Y  A  P  K  T  P  P  L  Q  F  E  :  K  D  I  K  N  L  L  G  V  A  *  A  L  Q  V  *  K  F  S  I  C  I  D  L  Q  L  E  V  L  S  W  F  Y  L  F  P  S  S  L  P  T  K  Q  A  S  L  Y  P  T  P  L  V  F  P  C  *  C  T  L  V  V  *  T  R  S  L  P  *  I  C  N  K  S  C  I  V  V  V  L  M  T  R  D  C  S  C  S  I  Y  K  Y  V  I  A  L  I  I  R  N  K  L  C  A  G  C  L  A  *  V  N  *  L </second_frame>
            <third_frame>   K  N  N  N  Y  Q  N  *  E  H  I  F  L  I  K  V  I  N  F  A  F  I  A  K  Y  L  V  *  F  *  L  P  H  L  I  N  F  F  F  D  L  Y  M  H  R  L  D  R  I  R  R  C  *  V  S  P  I  *  L  L  F  S  F  L  F  L  L  C  S  C  S  I  D  T  H  L  F  L  L  W  L  K  D  H  Q  N  L  F  M  I  S  L  *  R :   I  Y  R  E  M  R  Y  L  *  A  I  I  G  E  R  F  S  L  L  S  M  L  H  Q  N   : V  V  *  Q  I  Q  T  T  R  S  *  I  F  C  M  R  S  T  K  I  K  :  V  L  K  F  *  H  F  L  V  T  S  S  C  G  K  N  P  E  Q  M  R  R  F  S  K  L  Y  A  P  G  S  K  L  N  S  L  Y  L  K  R :   L  M  *  T  G  I  M  L  H  H  F  T  S  S  *  N  Q  K  K  A  V  S  L  E  V  L  S  S  G  T  S  P  N  S  L  W  T  K  K  E  R  L  W  N  D  M  H  P  R  H  H  L  F  S  L  R :   K  T  *  K  I  C  W  V  W  L  E  H  Y  R  C  E  S  S  A  Y  V  L  T  F  S  W  K  C  F  H  G  S  I  F  F  L  L  P  C  L  R  N  K  R  A  C  T  P  P  P  *  F  F  L  V  D  V  L  W  L  C  K  L  V  H  C  H  E  F  V  I  K  V  A  *  *  L  F  *  *  L  G  T  V  V  A  R  Y  T  S  M  L  S  P  *  *  *  E  I  S  C  V  Q  D  V  L  R  R  *  T  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55563" stop="55700"/>
                    <exon start="56825" stop="56901"/>
                    <exon start="57675" stop="57736"/>
                    <exon start="57835" stop="57953"/>
                    <exon start="58738" stop="58905"/>
                    <exon start="59145" stop="59177"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>594</number_coding_nucleotides>
                  <number_encoded_amino_acids>198</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKKMLSFTNLAALFFLVLALFLFYRYPSFSLMAEGSPKSIYDFTVKDIQGNEVPLSNYRGKVLLIVNVASKCGLTDSNYKELNILYEKYKDQGFEILAFPCNQFLWQEPGTNEEIQQTVCTRFKAEFPVFEKIDVNGDNAAPLYKFLKSEKGGFLGSAVKWNFTKFLVDKEGKVVERYAPKTPPLQFEKDIKNLLGVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="55418" e_stop="55700"/>
            <exon e_start="56825" e_stop="56901"/>
            <exon e_start="57675" e_stop="57736"/>
            <exon e_start="57835" e_stop="57953"/>
            <exon e_start="58738" e_stop="58905"/>
            <exon e_start="59145" e_stop="59381"/>
            <exon e_start="60337" e_stop="60348"/>
            <exon e_start="60507" e_stop="60523"/>
            <exon e_start="60876" e_stop="60915"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.942" e_score="0.993"/>
          <exon-intron don_prob="0.996" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.764" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.943" e_score="1.000"/>
          <exon-intron don_prob="0.893" acc_prob="0.700" e_score="0.417"/>
          <exon-intron don_prob="0.265" acc_prob="0.930" e_score="0.412"/>
          <exon-only e_score="0.550"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="55418" e_stop="55700" e_length="283"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.942">
            <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="56825" e_stop="56901" e_length="77"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.991">
            <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="57675" e_stop="57736" e_length="62"/>
          </exon>
          <intron i_serial="3" don_prob="0.764" acc_prob="0.000">
            <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="57835" e_stop="57953" e_length="119"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.997">
            <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="58738" e_stop="58905" e_length="168"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="59145" e_stop="59381" e_length="237"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.943">
            <gDNA_intron_boundary i_start="59382" i_stop="60336" i_length="955"/>
          </intron>
          <exon e_serial="7" e_score="0.417">
            <gDNA_exon_boundary e_start="60337" e_stop="60348" e_length="12"/>
          </exon>
          <intron i_serial="7" don_prob="0.893" acc_prob="0.700">
            <gDNA_intron_boundary i_start="60349" i_stop="60506" i_length="158"/>
          </intron>
          <exon e_serial="8" e_score="0.412">
            <gDNA_exon_boundary e_start="60507" e_stop="60523" e_length="17"/>
          </exon>
          <intron i_serial="8" don_prob="0.265" acc_prob="0.930">
            <gDNA_intron_boundary i_start="60524" i_stop="60875" i_length="352"/>
          </intron>
          <exon e_serial="9" e_score="0.550">
            <gDNA_exon_boundary e_start="60876" e_stop="60915" e_length="40"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55418" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59255"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723194" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55572" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E724423" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55601" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59295"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459694" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55604" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59353"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465734" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55615" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57865"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201450" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55619" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55623" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57853"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338284" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55635" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270713" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55647" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59347"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355005" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55671" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59361"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457363" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55673" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59311"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351639" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59365"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606082" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56875" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59381"/>
              <exon start="60337" stop="60348"/>
              <exon start="60507" stop="60523"/>
              <exon start="60876" stop="60915"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59287"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57882" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59297"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239498" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57928" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59377"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265548" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGAAGAACAACAACTACCAAAATTAAGAGCACATTTTCCTAATTAAAGTAATAAATTTCGCTTTCATTGCCAAATATCTTGTTTGATTTTGATTACCCCATTTAATTAATTTTTTTTTTGACTTATATATGCATAGGTTAGATAGAATAAGAAGATGCTGAGTTTCACCAATTTAGCTGCTCTTTTCTTTCTTGTTCTTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAG : GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATG : TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG : GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG : ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG : AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTA : GTAAAGCATGAG : TTACATAATTTAACAGT : ATACAAAACCCTAGAGAGAGGGGGGAAAAAAAGACTCACC</gDNA_template>
            <first_frame> G  R  T  T  T  T  K  I  K  S  T  F  S  *  L  K  *  *  I  S  L  S  L  P  N  I  L  F  D  F  D  Y  P  I  *  L  I  F  F  L  T  Y  I  C  I  G  *  I  E  *  E  D  A  E  F  H  Q  F  S  C  S  F  L  S  C  S  C  F  V  L  V  L  *  I  P  I  F  F  S  Y  G  *  R  I  T  K  I  Y  L  *  F  H  C  E   : G  Y  T  G  K  *  G  T  F  E  Q  L  *  G  K  G  S  P  Y  C  Q  C  C  I  K  M  :  W  F  N  R  F  K  L  Q  G  A  E  Y  F  V  *  E  V  Q  R  S  R :   F  *  N  F  S  I  S  L  *  P  V  P  V  A  R  T  R  N  K  *  G  D  S  A  N  C  M  H  Q  V  Q  S  *  I  P  C  I  *  K   : D  *  C  E  R  G  *  C  C  T  T  L  Q  V  L  E  I  R  K  R  R  F  P  W  K  C  C  Q  V  E  L  H  Q  I  P  C  G  Q  R  R  K  G  C  G  T  I  C  T  Q  D  T  T  S  S  V  *   : E  R  H  K  K  S  V  G  C  G  L  S  T  T  G  V  K  V  Q  H  M  Y  *  P  S  V  G  S  A  F  M  V  L  S  F  S  F  F  P  A  Y  E  T  S  E  L  V  P  H  P  L  S  F  S  L  L  M  Y  F  G  C  V  N  S  F  I  A  M  N  L  *  *  K  L  H  S  S  C  F   : S  K  A  *   : V  T  *  F  N  S  :  I  Q  N  P  R  E  R  G  E  K  K  T  H  </first_frame>
            <second_frame>  E  E  Q  Q  L  P  K  L  R  A  H  F  P  N  *  S  N  K  F  R  F  H  C  Q  I  S  C  L  I  L  I  T  P  F  N  *  F  F  F  *  L  I  Y  A  *  V  R  *  N  K  K  M  L  S  F  T  N  L  A  A  L  F  F  L  V  L  A  L  F  L  F  Y  R  Y  P  S  F  S  L  M  A  E  G  S  P  K  S  I  Y  D  F  T  V  K  :  D  I  Q  G  N  E  V  P  L  S  N  Y  R  G  K  V  L  L  I  V  N  V  A  S  K  C :   G  L  T  D  S  N  Y  K  E  L  N  I  L  Y  E  K  Y  K  D  Q   : G  F  E  I  L  A  F  P  C  N  Q  F  L  W  Q  E  P  G  T  N  E  E  I  Q  Q  T  V  C  T  R  F  K  A  E  F  P  V  F  E  K  :  I  D  V  N  G  D  N  A  A  P  L  Y  K  F  L  K  S  E  K  G  G  F  L  G  S  A  V  K  W  N  F  T  K  F  L  V  D  K  E  G  K  V  V  E  R  Y  A  P  K  T  P  P  L  Q  F  E  :  K  D  I  K  N  L  L  G  V  A  *  A  L  Q  V  *  K  F  S  I  C  I  D  L  Q  L  E  V  L  S  W  F  Y  L  F  P  S  S  L  P  T  K  Q  A  S  L  Y  P  T  P  L  V  F  P  C  *  C  T  L  V  V  *  T  R  S  L  P  *  I  C  N  K  S  C  I  V  V  V  L  :  V  K  H  E  :  L  H  N  L  T  V :   Y  K  T  L  E  R  G  G  K  K  R  L  T </second_frame>
            <third_frame>   K  N  N  N  Y  Q  N  *  E  H  I  F  L  I  K  V  I  N  F  A  F  I  A  K  Y  L  V  *  F  *  L  P  H  L  I  N  F  F  F  D  L  Y  M  H  R  L  D  R  I  R  R  C  *  V  S  P  I  *  L  L  F  S  F  L  F  L  L  C  S  C  S  I  D  T  H  L  F  L  L  W  L  K  D  H  Q  N  L  F  M  I  S  L  *  R :   I  Y  R  E  M  R  Y  L  *  A  I  I  G  E  R  F  S  L  L  S  M  L  H  Q  N   : V  V  *  Q  I  Q  T  T  R  S  *  I  F  C  M  R  S  T  K  I  K  :  V  L  K  F  *  H  F  L  V  T  S  S  C  G  K  N  P  E  Q  M  R  R  F  S  K  L  Y  A  P  G  S  K  L  N  S  L  Y  L  K  R :   L  M  *  T  G  I  M  L  H  H  F  T  S  S  *  N  Q  K  K  A  V  S  L  E  V  L  S  S  G  T  S  P  N  S  L  W  T  K  K  E  R  L  W  N  D  M  H  P  R  H  H  L  F  S  L  R :   K  T  *  K  I  C  W  V  W  L  E  H  Y  R  C  E  S  S  A  Y  V  L  T  F  S  W  K  C  F  H  G  S  I  F  F  L  L  P  C  L  R  N  K  R  A  C  T  P  P  P  *  F  F  L  V  D  V  L  W  L  C  K  L  V  H  C  H  E  F  V  I  K  V  A  *  *  L  F  * :   *  S  M  S :   Y  I  I  *  Q   : Y  T  K  P  *  R  E  G  G  K  K  D  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55563" stop="55700"/>
                    <exon start="56825" stop="56901"/>
                    <exon start="57675" stop="57736"/>
                    <exon start="57835" stop="57953"/>
                    <exon start="58738" stop="58905"/>
                    <exon start="59145" stop="59177"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>594</number_coding_nucleotides>
                  <number_encoded_amino_acids>198</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKKMLSFTNLAALFFLVLALFLFYRYPSFSLMAEGSPKSIYDFTVKDIQGNEVPLSNYRGKVLLIVNVASKCGLTDSNYKELNILYEKYKDQGFEILAFPCNQFLWQEPGTNEEIQQTVCTRFKAEFPVFEKIDVNGDNAAPLYKFLKSEKGGFLGSAVKWNFTKFLVDKEGKVVERYAPKTPPLQFEKDIKNLLGVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="55418" e_stop="55700"/>
            <exon e_start="56825" e_stop="56901"/>
            <exon e_start="57675" e_stop="57736"/>
            <exon e_start="57835" e_stop="57953"/>
            <exon e_start="58738" e_stop="58905"/>
            <exon e_start="59145" e_stop="59380"/>
            <exon e_start="60131" e_stop="60164"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.942" e_score="0.993"/>
          <exon-intron don_prob="0.996" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.764" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.676"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="55418" e_stop="55700" e_length="283"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.942">
            <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="56825" e_stop="56901" e_length="77"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.991">
            <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="57675" e_stop="57736" e_length="62"/>
          </exon>
          <intron i_serial="3" don_prob="0.764" acc_prob="0.000">
            <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="57835" e_stop="57953" e_length="119"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.997">
            <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="58738" e_stop="58905" e_length="168"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="59145" e_stop="59380" e_length="236"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="59381" i_stop="60130" i_length="750"/>
          </intron>
          <exon e_serial="7" e_score="0.676">
            <gDNA_exon_boundary e_start="60131" e_stop="60164" e_length="34"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55418" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59255"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723194" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55572" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E724423" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55601" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59295"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459694" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55604" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59353"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465734" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55615" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57865"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201450" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55619" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55623" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57853"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338284" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55635" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270713" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55647" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59347"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355005" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55671" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59361"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457363" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55672" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59380"/>
              <exon start="60131" stop="60164"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370291" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55673" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59311"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351639" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59365"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606082" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59287"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57882" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59297"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239498" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57928" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59377"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265548" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGAAGAACAACAACTACCAAAATTAAGAGCACATTTTCCTAATTAAAGTAATAAATTTCGCTTTCATTGCCAAATATCTTGTTTGATTTTGATTACCCCATTTAATTAATTTTTTTTTTGACTTATATATGCATAGGTTAGATAGAATAAGAAGATGCTGAGTTTCACCAATTTAGCTGCTCTTTTCTTTCTTGTTCTTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAG : GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATG : TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG : GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG : ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG : AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTT : TTACATAAGAAAACAAAATTAAAACATGAAGAAG</gDNA_template>
            <first_frame> G  R  T  T  T  T  K  I  K  S  T  F  S  *  L  K  *  *  I  S  L  S  L  P  N  I  L  F  D  F  D  Y  P  I  *  L  I  F  F  L  T  Y  I  C  I  G  *  I  E  *  E  D  A  E  F  H  Q  F  S  C  S  F  L  S  C  S  C  F  V  L  V  L  *  I  P  I  F  F  S  Y  G  *  R  I  T  K  I  Y  L  *  F  H  C  E   : G  Y  T  G  K  *  G  T  F  E  Q  L  *  G  K  G  S  P  Y  C  Q  C  C  I  K  M  :  W  F  N  R  F  K  L  Q  G  A  E  Y  F  V  *  E  V  Q  R  S  R :   F  *  N  F  S  I  S  L  *  P  V  P  V  A  R  T  R  N  K  *  G  D  S  A  N  C  M  H  Q  V  Q  S  *  I  P  C  I  *  K   : D  *  C  E  R  G  *  C  C  T  T  L  Q  V  L  E  I  R  K  R  R  F  P  W  K  C  C  Q  V  E  L  H  Q  I  P  C  G  Q  R  R  K  G  C  G  T  I  C  T  Q  D  T  T  S  S  V  *   : E  R  H  K  K  S  V  G  C  G  L  S  T  T  G  V  K  V  Q  H  M  Y  *  P  S  V  G  S  A  F  M  V  L  S  F  S  F  F  P  A  Y  E  T  S  E  L  V  P  H  P  L  S  F  S  L  L  M  Y  F  G  C  V  N  S  F  I  A  M  N  L  *  *  K  L  H  S  S  C  F  :  L  H  K  K  T  K  L  K  H  E  E  </first_frame>
            <second_frame>  E  E  Q  Q  L  P  K  L  R  A  H  F  P  N  *  S  N  K  F  R  F  H  C  Q  I  S  C  L  I  L  I  T  P  F  N  *  F  F  F  *  L  I  Y  A  *  V  R  *  N  K  K  M  L  S  F  T  N  L  A  A  L  F  F  L  V  L  A  L  F  L  F  Y  R  Y  P  S  F  S  L  M  A  E  G  S  P  K  S  I  Y  D  F  T  V  K  :  D  I  Q  G  N  E  V  P  L  S  N  Y  R  G  K  V  L  L  I  V  N  V  A  S  K  C :   G  L  T  D  S  N  Y  K  E  L  N  I  L  Y  E  K  Y  K  D  Q   : G  F  E  I  L  A  F  P  C  N  Q  F  L  W  Q  E  P  G  T  N  E  E  I  Q  Q  T  V  C  T  R  F  K  A  E  F  P  V  F  E  K  :  I  D  V  N  G  D  N  A  A  P  L  Y  K  F  L  K  S  E  K  G  G  F  L  G  S  A  V  K  W  N  F  T  K  F  L  V  D  K  E  G  K  V  V  E  R  Y  A  P  K  T  P  P  L  Q  F  E  :  K  D  I  K  N  L  L  G  V  A  *  A  L  Q  V  *  K  F  S  I  C  I  D  L  Q  L  E  V  L  S  W  F  Y  L  F  P  S  S  L  P  T  K  Q  A  S  L  Y  P  T  P  L  V  F  P  C  *  C  T  L  V  V  *  T  R  S  L  P  *  I  C  N  K  S  C  I  V  V  V  F :   Y  I  R  K  Q  N  *  N  M  K  K </second_frame>
            <third_frame>   K  N  N  N  Y  Q  N  *  E  H  I  F  L  I  K  V  I  N  F  A  F  I  A  K  Y  L  V  *  F  *  L  P  H  L  I  N  F  F  F  D  L  Y  M  H  R  L  D  R  I  R  R  C  *  V  S  P  I  *  L  L  F  S  F  L  F  L  L  C  S  C  S  I  D  T  H  L  F  L  L  W  L  K  D  H  Q  N  L  F  M  I  S  L  *  R :   I  Y  R  E  M  R  Y  L  *  A  I  I  G  E  R  F  S  L  L  S  M  L  H  Q  N   : V  V  *  Q  I  Q  T  T  R  S  *  I  F  C  M  R  S  T  K  I  K  :  V  L  K  F  *  H  F  L  V  T  S  S  C  G  K  N  P  E  Q  M  R  R  F  S  K  L  Y  A  P  G  S  K  L  N  S  L  Y  L  K  R :   L  M  *  T  G  I  M  L  H  H  F  T  S  S  *  N  Q  K  K  A  V  S  L  E  V  L  S  S  G  T  S  P  N  S  L  W  T  K  K  E  R  L  W  N  D  M  H  P  R  H  H  L  F  S  L  R :   K  T  *  K  I  C  W  V  W  L  E  H  Y  R  C  E  S  S  A  Y  V  L  T  F  S  W  K  C  F  H  G  S  I  F  F  L  L  P  C  L  R  N  K  R  A  C  T  P  P  P  *  F  F  L  V  D  V  L  W  L  C  K  L  V  H  C  H  E  F  V  I  K  V  A  *  *  L  F   : F  T  *  E  N  K  I  K  T  *  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55563" stop="55700"/>
                    <exon start="56825" stop="56901"/>
                    <exon start="57675" stop="57736"/>
                    <exon start="57835" stop="57953"/>
                    <exon start="58738" stop="58905"/>
                    <exon start="59145" stop="59177"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>594</number_coding_nucleotides>
                  <number_encoded_amino_acids>198</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKKMLSFTNLAALFFLVLALFLFYRYPSFSLMAEGSPKSIYDFTVKDIQGNEVPLSNYRGKVLLIVNVASKCGLTDSNYKELNILYEKYKDQGFEILAFPCNQFLWQEPGTNEEIQQTVCTRFKAEFPVFEKIDVNGDNAAPLYKFLKSEKGGFLGSAVKWNFTKFLVDKEGKVVERYAPKTPPLQFEKDIKNLLGVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="55418" e_stop="55700"/>
            <exon e_start="56825" e_stop="56901"/>
            <exon e_start="57675" e_stop="57736"/>
            <exon e_start="57835" e_stop="57953"/>
            <exon e_start="58738" e_stop="58905"/>
            <exon e_start="59145" e_stop="59382"/>
            <exon e_start="60129" e_stop="60167"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.942" e_score="0.993"/>
          <exon-intron don_prob="0.996" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.764" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.615"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="55418" e_stop="55700" e_length="283"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.942">
            <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="56825" e_stop="56901" e_length="77"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.991">
            <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="57675" e_stop="57736" e_length="62"/>
          </exon>
          <intron i_serial="3" don_prob="0.764" acc_prob="0.000">
            <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="57835" e_stop="57953" e_length="119"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.997">
            <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="58738" e_stop="58905" e_length="168"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="59145" e_stop="59382" e_length="238"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="59383" i_stop="60128" i_length="746"/>
          </intron>
          <exon e_serial="7" e_score="0.615">
            <gDNA_exon_boundary e_start="60129" e_stop="60167" e_length="39"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55418" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59255"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723194" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55572" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E724423" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55601" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59295"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459694" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55604" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59353"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465734" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55615" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57865"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201450" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55619" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55623" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57853"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338284" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55635" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59382"/>
              <exon start="60129" stop="60167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370292" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55635" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270713" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55647" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59347"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355005" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55671" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59361"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457363" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55673" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59311"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351639" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59365"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606082" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59287"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57882" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59297"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239498" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57928" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59377"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265548" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGAAGAACAACAACTACCAAAATTAAGAGCACATTTTCCTAATTAAAGTAATAAATTTCGCTTTCATTGCCAAATATCTTGTTTGATTTTGATTACCCCATTTAATTAATTTTTTTTTTGACTTATATATGCATAGGTTAGATAGAATAAGAAGATGCTGAGTTTCACCAATTTAGCTGCTCTTTTCTTTCTTGTTCTTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAG : GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATG : TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG : GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG : ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG : AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAA : CATTACATAAGAAAACAAAATTAAAACATGAAGAAGAAT</gDNA_template>
            <first_frame> G  R  T  T  T  T  K  I  K  S  T  F  S  *  L  K  *  *  I  S  L  S  L  P  N  I  L  F  D  F  D  Y  P  I  *  L  I  F  F  L  T  Y  I  C  I  G  *  I  E  *  E  D  A  E  F  H  Q  F  S  C  S  F  L  S  C  S  C  F  V  L  V  L  *  I  P  I  F  F  S  Y  G  *  R  I  T  K  I  Y  L  *  F  H  C  E   : G  Y  T  G  K  *  G  T  F  E  Q  L  *  G  K  G  S  P  Y  C  Q  C  C  I  K  M  :  W  F  N  R  F  K  L  Q  G  A  E  Y  F  V  *  E  V  Q  R  S  R :   F  *  N  F  S  I  S  L  *  P  V  P  V  A  R  T  R  N  K  *  G  D  S  A  N  C  M  H  Q  V  Q  S  *  I  P  C  I  *  K   : D  *  C  E  R  G  *  C  C  T  T  L  Q  V  L  E  I  R  K  R  R  F  P  W  K  C  C  Q  V  E  L  H  Q  I  P  C  G  Q  R  R  K  G  C  G  T  I  C  T  Q  D  T  T  S  S  V  *   : E  R  H  K  K  S  V  G  C  G  L  S  T  T  G  V  K  V  Q  H  M  Y  *  P  S  V  G  S  A  F  M  V  L  S  F  S  F  F  P  A  Y  E  T  S  E  L  V  P  H  P  L  S  F  S  L  L  M  Y  F  G  C  V  N  S  F  I  A  M  N  L  *  *  K  L  H  S  S  C  F  N :   I  T  *  E  N  K  I  K  T  *  R  R   </first_frame>
            <second_frame>  E  E  Q  Q  L  P  K  L  R  A  H  F  P  N  *  S  N  K  F  R  F  H  C  Q  I  S  C  L  I  L  I  T  P  F  N  *  F  F  F  *  L  I  Y  A  *  V  R  *  N  K  K  M  L  S  F  T  N  L  A  A  L  F  F  L  V  L  A  L  F  L  F  Y  R  Y  P  S  F  S  L  M  A  E  G  S  P  K  S  I  Y  D  F  T  V  K  :  D  I  Q  G  N  E  V  P  L  S  N  Y  R  G  K  V  L  L  I  V  N  V  A  S  K  C :   G  L  T  D  S  N  Y  K  E  L  N  I  L  Y  E  K  Y  K  D  Q   : G  F  E  I  L  A  F  P  C  N  Q  F  L  W  Q  E  P  G  T  N  E  E  I  Q  Q  T  V  C  T  R  F  K  A  E  F  P  V  F  E  K  :  I  D  V  N  G  D  N  A  A  P  L  Y  K  F  L  K  S  E  K  G  G  F  L  G  S  A  V  K  W  N  F  T  K  F  L  V  D  K  E  G  K  V  V  E  R  Y  A  P  K  T  P  P  L  Q  F  E  :  K  D  I  K  N  L  L  G  V  A  *  A  L  Q  V  *  K  F  S  I  C  I  D  L  Q  L  E  V  L  S  W  F  Y  L  F  P  S  S  L  P  T  K  Q  A  S  L  Y  P  T  P  L  V  F  P  C  *  C  T  L  V  V  *  T  R  S  L  P  *  I  C  N  K  S  C  I  V  V  V  L   : T  L  H  K  K  T  K  L  K  H  E  E  E  </second_frame>
            <third_frame>   K  N  N  N  Y  Q  N  *  E  H  I  F  L  I  K  V  I  N  F  A  F  I  A  K  Y  L  V  *  F  *  L  P  H  L  I  N  F  F  F  D  L  Y  M  H  R  L  D  R  I  R  R  C  *  V  S  P  I  *  L  L  F  S  F  L  F  L  L  C  S  C  S  I  D  T  H  L  F  L  L  W  L  K  D  H  Q  N  L  F  M  I  S  L  *  R :   I  Y  R  E  M  R  Y  L  *  A  I  I  G  E  R  F  S  L  L  S  M  L  H  Q  N   : V  V  *  Q  I  Q  T  T  R  S  *  I  F  C  M  R  S  T  K  I  K  :  V  L  K  F  *  H  F  L  V  T  S  S  C  G  K  N  P  E  Q  M  R  R  F  S  K  L  Y  A  P  G  S  K  L  N  S  L  Y  L  K  R :   L  M  *  T  G  I  M  L  H  H  F  T  S  S  *  N  Q  K  K  A  V  S  L  E  V  L  S  S  G  T  S  P  N  S  L  W  T  K  K  E  R  L  W  N  D  M  H  P  R  H  H  L  F  S  L  R :   K  T  *  K  I  C  W  V  W  L  E  H  Y  R  C  E  S  S  A  Y  V  L  T  F  S  W  K  C  F  H  G  S  I  F  F  L  L  P  C  L  R  N  K  R  A  C  T  P  P  P  *  F  F  L  V  D  V  L  W  L  C  K  L  V  H  C  H  E  F  V  I  K  V  A  *  *  L  F  *  :  H  Y  I  R  K  Q  N  *  N  M  K  K  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55563" stop="55700"/>
                    <exon start="56825" stop="56901"/>
                    <exon start="57675" stop="57736"/>
                    <exon start="57835" stop="57953"/>
                    <exon start="58738" stop="58905"/>
                    <exon start="59145" stop="59177"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>594</number_coding_nucleotides>
                  <number_encoded_amino_acids>198</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKKMLSFTNLAALFFLVLALFLFYRYPSFSLMAEGSPKSIYDFTVKDIQGNEVPLSNYRGKVLLIVNVASKCGLTDSNYKELNILYEKYKDQGFEILAFPCNQFLWQEPGTNEEIQQTVCTRFKAEFPVFEKIDVNGDNAAPLYKFLKSEKGGFLGSAVKWNFTKFLVDKEGKVVERYAPKTPPLQFEKDIKNLLGVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="55418" e_stop="55700"/>
            <exon e_start="56825" e_stop="56901"/>
            <exon e_start="57675" e_stop="57736"/>
            <exon e_start="57835" e_stop="57953"/>
            <exon e_start="58738" e_stop="58905"/>
            <exon e_start="59145" e_stop="59372"/>
            <exon e_start="60140" e_stop="60156"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.942" e_score="0.993"/>
          <exon-intron don_prob="0.996" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.764" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.765"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="55418" e_stop="55700" e_length="283"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.942">
            <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="56825" e_stop="56901" e_length="77"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.991">
            <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="57675" e_stop="57736" e_length="62"/>
          </exon>
          <intron i_serial="3" don_prob="0.764" acc_prob="0.000">
            <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="57835" e_stop="57953" e_length="119"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.997">
            <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="58738" e_stop="58905" e_length="168"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="59145" e_stop="59372" e_length="228"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="59373" i_stop="60139" i_length="767"/>
          </intron>
          <exon e_serial="7" e_score="0.765">
            <gDNA_exon_boundary e_start="60140" e_stop="60156" e_length="17"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55418" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59255"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723194" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55572" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E724423" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55595" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59372"/>
              <exon start="60140" stop="60156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747499" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55601" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59295"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459694" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55604" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59353"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465734" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55615" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57865"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201450" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55619" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55623" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57853"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338284" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55635" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270713" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55647" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59347"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355005" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55671" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59361"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457363" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55673" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59311"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351639" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59365"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606082" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59287"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57882" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59297"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239498" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="5" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGAAGAACAACAACTACCAAAATTAAGAGCACATTTTCCTAATTAAAGTAATAAATTTCGCTTTCATTGCCAAATATCTTGTTTGATTTTGATTACCCCATTTAATTAATTTTTTTTTTGACTTATATATGCATAGGTTAGATAGAATAAGAAGATGCTGAGTTTCACCAATTTAGCTGCTCTTTTCTTTCTTGTTCTTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAG : GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATG : TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG : GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG : ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG : AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTA : AAAACAAAATTAAAACA</gDNA_template>
            <first_frame> G  R  T  T  T  T  K  I  K  S  T  F  S  *  L  K  *  *  I  S  L  S  L  P  N  I  L  F  D  F  D  Y  P  I  *  L  I  F  F  L  T  Y  I  C  I  G  *  I  E  *  E  D  A  E  F  H  Q  F  S  C  S  F  L  S  C  S  C  F  V  L  V  L  *  I  P  I  F  F  S  Y  G  *  R  I  T  K  I  Y  L  *  F  H  C  E   : G  Y  T  G  K  *  G  T  F  E  Q  L  *  G  K  G  S  P  Y  C  Q  C  C  I  K  M  :  W  F  N  R  F  K  L  Q  G  A  E  Y  F  V  *  E  V  Q  R  S  R :   F  *  N  F  S  I  S  L  *  P  V  P  V  A  R  T  R  N  K  *  G  D  S  A  N  C  M  H  Q  V  Q  S  *  I  P  C  I  *  K   : D  *  C  E  R  G  *  C  C  T  T  L  Q  V  L  E  I  R  K  R  R  F  P  W  K  C  C  Q  V  E  L  H  Q  I  P  C  G  Q  R  R  K  G  C  G  T  I  C  T  Q  D  T  T  S  S  V  *   : E  R  H  K  K  S  V  G  C  G  L  S  T  T  G  V  K  V  Q  H  M  Y  *  P  S  V  G  S  A  F  M  V  L  S  F  S  F  F  P  A  Y  E  T  S  E  L  V  P  H  P  L  S  F  S  L  L  M  Y  F  G  C  V  N  S  F  I  A  M  N  L  *  *  K  L  H  S   : K  N  K  I  K  T </first_frame>
            <second_frame>  E  E  Q  Q  L  P  K  L  R  A  H  F  P  N  *  S  N  K  F  R  F  H  C  Q  I  S  C  L  I  L  I  T  P  F  N  *  F  F  F  *  L  I  Y  A  *  V  R  *  N  K  K  M  L  S  F  T  N  L  A  A  L  F  F  L  V  L  A  L  F  L  F  Y  R  Y  P  S  F  S  L  M  A  E  G  S  P  K  S  I  Y  D  F  T  V  K  :  D  I  Q  G  N  E  V  P  L  S  N  Y  R  G  K  V  L  L  I  V  N  V  A  S  K  C :   G  L  T  D  S  N  Y  K  E  L  N  I  L  Y  E  K  Y  K  D  Q   : G  F  E  I  L  A  F  P  C  N  Q  F  L  W  Q  E  P  G  T  N  E  E  I  Q  Q  T  V  C  T  R  F  K  A  E  F  P  V  F  E  K  :  I  D  V  N  G  D  N  A  A  P  L  Y  K  F  L  K  S  E  K  G  G  F  L  G  S  A  V  K  W  N  F  T  K  F  L  V  D  K  E  G  K  V  V  E  R  Y  A  P  K  T  P  P  L  Q  F  E  :  K  D  I  K  N  L  L  G  V  A  *  A  L  Q  V  *  K  F  S  I  C  I  D  L  Q  L  E  V  L  S  W  F  Y  L  F  P  S  S  L  P  T  K  Q  A  S  L  Y  P  T  P  L  V  F  P  C  *  C  T  L  V  V  *  T  R  S  L  P  *  I  C  N  K  S  C  I  V  :  K  T  K  L  K   </second_frame>
            <third_frame>   K  N  N  N  Y  Q  N  *  E  H  I  F  L  I  K  V  I  N  F  A  F  I  A  K  Y  L  V  *  F  *  L  P  H  L  I  N  F  F  F  D  L  Y  M  H  R  L  D  R  I  R  R  C  *  V  S  P  I  *  L  L  F  S  F  L  F  L  L  C  S  C  S  I  D  T  H  L  F  L  L  W  L  K  D  H  Q  N  L  F  M  I  S  L  *  R :   I  Y  R  E  M  R  Y  L  *  A  I  I  G  E  R  F  S  L  L  S  M  L  H  Q  N   : V  V  *  Q  I  Q  T  T  R  S  *  I  F  C  M  R  S  T  K  I  K  :  V  L  K  F  *  H  F  L  V  T  S  S  C  G  K  N  P  E  Q  M  R  R  F  S  K  L  Y  A  P  G  S  K  L  N  S  L  Y  L  K  R :   L  M  *  T  G  I  M  L  H  H  F  T  S  S  *  N  Q  K  K  A  V  S  L  E  V  L  S  S  G  T  S  P  N  S  L  W  T  K  K  E  R  L  W  N  D  M  H  P  R  H  H  L  F  S  L  R :   K  T  *  K  I  C  W  V  W  L  E  H  Y  R  C  E  S  S  A  Y  V  L  T  F  S  W  K  C  F  H  G  S  I  F  F  L  L  P  C  L  R  N  K  R  A  C  T  P  P  P  *  F  F  L  V  D  V  L  W  L  C  K  L  V  H  C  H  E  F  V  I  K  V  A  *  * :   K  Q  N  *  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55563" stop="55700"/>
                    <exon start="56825" stop="56901"/>
                    <exon start="57675" stop="57736"/>
                    <exon start="57835" stop="57953"/>
                    <exon start="58738" stop="58905"/>
                    <exon start="59145" stop="59177"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>594</number_coding_nucleotides>
                  <number_encoded_amino_acids>198</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKKMLSFTNLAALFFLVLALFLFYRYPSFSLMAEGSPKSIYDFTVKDIQGNEVPLSNYRGKVLLIVNVASKCGLTDSNYKELNILYEKYKDQGFEILAFPCNQFLWQEPGTNEEIQQTVCTRFKAEFPVFEKIDVNGDNAAPLYKFLKSEKGGFLGSAVKWNFTKFLVDKEGKVVERYAPKTPPLQFEKDIKNLLGVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="55639" e_stop="55700"/>
            <exon e_start="56825" e_stop="56901"/>
            <exon e_start="57675" e_stop="57736"/>
            <exon e_start="57834" e_stop="57953"/>
            <exon e_start="58738" e_stop="58905"/>
            <exon e_start="59145" e_stop="59480"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.942" e_score="0.887"/>
          <exon-intron don_prob="0.996" acc_prob="0.991" e_score="0.857"/>
          <exon-intron don_prob="0.764" acc_prob="0.000" e_score="0.903"/>
          <exon-intron don_prob="0.978" acc_prob="0.997" e_score="0.858"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.887">
            <gDNA_exon_boundary e_start="55639" e_stop="55700" e_length="62"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.942">
            <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124"/>
          </intron>
          <exon e_serial="2" e_score="0.857">
            <gDNA_exon_boundary e_start="56825" e_stop="56901" e_length="77"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.991">
            <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773"/>
          </intron>
          <exon e_serial="3" e_score="0.903">
            <gDNA_exon_boundary e_start="57675" e_stop="57736" e_length="62"/>
          </exon>
          <intron i_serial="3" don_prob="0.764" acc_prob="0.000">
            <gDNA_intron_boundary i_start="57737" i_stop="57833" i_length="97"/>
          </intron>
          <exon e_serial="4" e_score="0.858">
            <gDNA_exon_boundary e_start="57834" e_stop="57953" e_length="120"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.997">
            <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="58738" e_stop="58905" e_length="168"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239"/>
          </intron>
          <exon e_serial="6" e_score="0.987">
            <gDNA_exon_boundary e_start="59145" e_stop="59480" e_length="336"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55639" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57834" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59455"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57878" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59391"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355021" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57882" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59297"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239498" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57922" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59480"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713723" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57922" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59480"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57922" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59480"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57928" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59377"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265548" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59446"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E695090" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="6" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAG : GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATG : TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG : GGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG : ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG : AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAGGATGTCTTGCGTAGGTAAACTGATTA</gDNA_template>
            <first_frame> T  H  L  F  L  L  W  L  K  D  H  Q  N  L  F  M  I  S  L  *  R :   I  Y  R  E  M  R  Y  L  *  A  I  I  G  E  R  F  S  L  L  S  M  L  H  Q  N   : V  V  *  Q  I  Q  T  T  R  S  *  I  F  C  M  R  S  T  K  I  K  :  G  F  E  I  L  A  F  P  C  N  Q  F  L  W  Q  E  P  G  T  N  E  E  I  Q  Q  T  V  C  T  R  F  K  A  E  F  P  V  F  E  K  :  I  D  V  N  G  D  N  A  A  P  L  Y  K  F  L  K  S  E  K  G  G  F  L  G  S  A  V  K  W  N  F  T  K  F  L  V  D  K  E  G  K  V  V  E  R  Y  A  P  K  T  P  P  L  Q  F  E  :  K  D  I  K  N  L  L  G  V  A  *  A  L  Q  V  *  K  F  S  I  C  I  D  L  Q  L  E  V  L  S  W  F  Y  L  F  P  S  S  L  P  T  K  Q  A  S  L  Y  P  T  P  L  V  F  P  C  *  C  T  L  V  V  *  T  R  S  L  P  *  I  C  N  K  S  C  I  V  V  V  L  M  T  R  D  C  S  C  S  I  Y  K  Y  V  I  A  L  I  I  R  N  K  L  C  A  G  C  L  A  *  V  N  *  L </first_frame>
            <second_frame>  P  I  F  F  S  Y  G  *  R  I  T  K  I  Y  L  *  F  H  C  E   : G  Y  T  G  K  *  G  T  F  E  Q  L  *  G  K  G  S  P  Y  C  Q  C  C  I  K  M  :  W  F  N  R  F  K  L  Q  G  A  E  Y  F  V  *  E  V  Q  R  S  R :   V  L  K  F  *  H  F  L  V  T  S  S  C  G  K  N  P  E  Q  M  R  R  F  S  K  L  Y  A  P  G  S  K  L  N  S  L  Y  L  K  R :   L  M  *  T  G  I  M  L  H  H  F  T  S  S  *  N  Q  K  K  A  V  S  L  E  V  L  S  S  G  T  S  P  N  S  L  W  T  K  K  E  R  L  W  N  D  M  H  P  R  H  H  L  F  S  L  R :   K  T  *  K  I  C  W  V  W  L  E  H  Y  R  C  E  S  S  A  Y  V  L  T  F  S  W  K  C  F  H  G  S  I  F  F  L  L  P  C  L  R  N  K  R  A  C  T  P  P  P  *  F  F  L  V  D  V  L  W  L  C  K  L  V  H  C  H  E  F  V  I  K  V  A  *  *  L  F  *  *  L  G  T  V  V  A  R  Y  T  S  M  L  S  P  *  *  *  E  I  S  C  V  Q  D  V  L  R  R  *  T  D   </second_frame>
            <third_frame>   P  S  F  S  L  M  A  E  G  S  P  K  S  I  Y  D  F  T  V  K  :  D  I  Q  G  N  E  V  P  L  S  N  Y  R  G  K  V  L  L  I  V  N  V  A  S  K  C :   G  L  T  D  S  N  Y  K  E  L  N  I  L  Y  E  K  Y  K  D  Q   : G  F  *  N  F  S  I  S  L  *  P  V  P  V  A  R  T  R  N  K  *  G  D  S  A  N  C  M  H  Q  V  Q  S  *  I  P  C  I  *  K   : D  *  C  E  R  G  *  C  C  T  T  L  Q  V  L  E  I  R  K  R  R  F  P  W  K  C  C  Q  V  E  L  H  Q  I  P  C  G  Q  R  R  K  G  C  G  T  I  C  T  Q  D  T  T  S  S  V  *   : E  R  H  K  K  S  V  G  C  G  L  S  T  T  G  V  K  V  Q  H  M  Y  *  P  S  V  G  S  A  F  M  V  L  S  F  S  F  F  P  A  Y  E  T  S  E  L  V  P  H  P  L  S  F  S  L  L  M  Y  F  G  C  V  N  S  F  I  A  M  N  L  *  *  K  L  H  S  S  C  F  N  D  S  G  L  *  L  L  D  I  Q  V  C  Y  R  L  N  N  K  K  *  V  V  C  R  M  S  C  V  G  K  L  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57707" stop="57736"/>
                    <exon start="57834" stop="57953"/>
                    <exon start="58738" stop="58905"/>
                    <exon start="59145" stop="59177"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>348</number_coding_nucleotides>
                  <number_encoded_amino_acids>116</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFCMRSTKIKGFEILAFPCNQFLWQEPGTNEEIQQTVCTRFKAEFPVFEKIDVNGDNAAPLYKFLKSEKGGFLGSAVKWNFTKFLVDKEGKVVERYAPKTPPLQFEKDIKNLLGVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="7">
          <exon_coordinates>
            <exon e_start="58736" e_stop="58905"/>
            <exon e_start="59145" e_stop="59455"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="0.988"/>
          <exon-only e_score="0.961"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="58736" e_stop="58905" e_length="170"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239"/>
          </intron>
          <exon e_serial="2" e_score="0.961">
            <gDNA_exon_boundary e_start="59145" e_stop="59455" e_length="311"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58736" stop="58905"/>
              <exon start="59145" stop="59455"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E691250" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59446"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E695090" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="7" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG : AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAGG</gDNA_template>
            <first_frame> R  L  M  *  T  G  I  M  L  H  H  F  T  S  S  *  N  Q  K  K  A  V  S  L  E  V  L  S  S  G  T  S  P  N  S  L  W  T  K  K  E  R  L  W  N  D  M  H  P  R  H  H  L  F  S  L  R :   K  T  *  K  I  C  W  V  W  L  E  H  Y  R  C  E  S  S  A  Y  V  L  T  F  S  W  K  C  F  H  G  S  I  F  F  L  L  P  C  L  R  N  K  R  A  C  T  P  P  P  *  F  F  L  V  D  V  L  W  L  C  K  L  V  H  C  H  E  F  V  I  K  V  A  *  *  L  F  *  *  L  G  T  V  V  A  R  Y  T  S  M  L  S  P  *  *  *  E  I  S  C  V  Q  </first_frame>
            <second_frame>  D  *  C  E  R  G  *  C  C  T  T  L  Q  V  L  E  I  R  K  R  R  F  P  W  K  C  C  Q  V  E  L  H  Q  I  P  C  G  Q  R  R  K  G  C  G  T  I  C  T  Q  D  T  T  S  S  V  *   : E  R  H  K  K  S  V  G  C  G  L  S  T  T  G  V  K  V  Q  H  M  Y  *  P  S  V  G  S  A  F  M  V  L  S  F  S  F  F  P  A  Y  E  T  S  E  L  V  P  H  P  L  S  F  S  L  L  M  Y  F  G  C  V  N  S  F  I  A  M  N  L  *  *  K  L  H  S  S  C  F  N  D  S  G  L  *  L  L  D  I  Q  V  C  Y  R  L  N  N  K  K  *  V  V  C  R </second_frame>
            <third_frame>   I  D  V  N  G  D  N  A  A  P  L  Y  K  F  L  K  S  E  K  G  G  F  L  G  S  A  V  K  W  N  F  T  K  F  L  V  D  K  E  G  K  V  V  E  R  Y  A  P  K  T  P  P  L  Q  F  E  :  K  D  I  K  N  L  L  G  V  A  *  A  L  Q  V  *  K  F  S  I  C  I  D  L  Q  L  E  V  L  S  W  F  Y  L  F  P  S  S  L  P  T  K  Q  A  S  L  Y  P  T  P  L  V  F  P  C  *  C  T  L  V  V  *  T  R  S  L  P  *  I  C  N  K  S  C  I  V  V  V  L  M  T  R  D  C  S  C  S  I  Y  K  Y  V  I  A  L  I  I  R  N  K  L  C  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="7" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58738" stop="58905"/>
                    <exon start="59145" stop="59177"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IDVNGDNAAPLYKFLKSEKGGFLGSAVKWNFTKFLVDKEGKVVERYAPKTPPLQFEKDIKNLLGVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="8">
          <exon_coordinates>
            <exon e_start="56793" e_stop="57405"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="56793" e_stop="57405" e_length="613"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56793" stop="57405"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56793" stop="57405"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688504" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="8" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAA</gDNA_template>
            <first_frame> I  *  A  C  *  R  D  *  K  C  R  I  Y  R  E  M  R  Y  L  *  A  I  I  G  E  R  F  S  L  L  S  M  L  H  Q  N  G  K  *  S  N  L  V  S  V  L  A  F  S  L  V  F  I  *  K  C  L  H  C  F  T  N  *  T  Y  E  L  Y  K  C  D  *  G  L  V  T  S  G  E  C  I  L  C  Q  I  L  C  Y  W  V  H  L  S  F  I  V  Q  *  *  C  Q  L  P  Q  T  R  C  T  R  L  G  M  N  F  C  Y  S  D  *  Y  V  F  A  C  F  W  *  M  E  N  S  L  K  G  F  F  L  F  *  F  T  T  R  *  S  S  C  I  I  F  W  D  S  L  T  K  E  V  A  S  R  F  F  E  L  T  *  L  I  I  I  Y  F  C  K  E  C  N  N  E  N  L  R  L  V  F  T  *  F  *  T  V  L  D  V  D  V  D  *  *  *  Y  I  I  </first_frame>
            <second_frame>  F  K  L  A  N  E  I  E  N  A  G  Y  T  G  K  *  G  T  F  E  Q  L  *  G  K  G  S  P  Y  C  Q  C  C  I  K  M  V  S  E  V  I  *  F  L  S  W  L  F  P  W  F  S  F  R  S  V  S  T  A  S  L  I  R  L  M  S  Y  I  S  V  T  K  V  *  L  L  L  E  S  V  Y  Y  V  K  Y  C  A  T  G  C  I  *  V  L  L  Y  N  D  D  V  N  C  H  K  L  D  V  L  V  *  G  *  I  S  V  I  L  I  S  M  S  L  H  V  F  G  R  W  K  I  P  *  K  V  S  F  Y  F  N  L  R  H  V  D  P  P  A  L  F  S  G  I  P  *  L  K  K  L  L  A  G  S  L  N  L  L  N  L  *  L  F  I  F  A  K  N  A  I  T  K  I  *  D  *  C  S  H  S  F  E  L  S  *  M  L  M  L  I  D  D  D  I  L  * </second_frame>
            <third_frame>   L  S  L  L  T  R  L  K  M  Q  D  I  Q  G  N  E  V  P  L  S  N  Y  R  G  K  V  L  L  I  V  N  V  A  S  K  W  *  V  K  *  S  S  F  C  L  G  F  F  L  G  F  H  L  E  V  S  P  L  L  H  *  L  D  L  *  V  I  *  V  *  L  R  S  S  Y  F  W  R  V  Y  T  M  S  N  I  V  L  L  G  A  F  K  F  Y  C  T  M  M  M  S  I  A  T  N  *  M  Y  S  F  R  D  E  F  L  L  F  *  L  V  C  L  C  M  F  L  V  D  G  K  F  L  K  R  F  L  F  I  L  I  Y  D  T  L  I  L  L  H  Y  F  L  G  F  P  D  *  R  S  C  *  Q  V  L  *  T  Y  L  T  Y  N  Y  L  F  L  Q  R  M  Q  *  R  K  F  E  I  S  V  H  I  V  L  N  C  L  R  C  *  C  *  L  M  M  I  Y  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0038F03.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="61450" PGL_stop="60076"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61450" e_stop="60915"/>
            <exon e_start="60582" e_stop="60076"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.981" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="61450" e_stop="60915" e_length="536"/>
          </exon>
          <intron i_serial="1" don_prob="0.981" acc_prob="0.999">
            <gDNA_intron_boundary i_start="60914" i_stop="60583" i_length="332"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="60582" e_stop="60076" e_length="507"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61450" stop="60946"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202870" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61449" stop="60915"/>
              <exon start="60582" stop="60258"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701245" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61448" stop="60915"/>
              <exon start="60582" stop="60382"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E373059" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61448" stop="60937"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292261" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61422" stop="61120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710657" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61287" stop="60915"/>
              <exon start="60582" stop="60165"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716284" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61187" stop="60915"/>
              <exon start="60582" stop="60076"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257123" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61083" stop="60915"/>
              <exon start="60582" stop="60381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238298" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60958" stop="60915"/>
              <exon start="60582" stop="60078"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E711418" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60387" stop="60078"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218656" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAAGAGAAAAACACTCAAAAAAGTTTGGAAGAAAAAAAAATGGAAACTTTTTCTCATCTATCATCAAGATCCAGGTCTTGTGAGAGCTTTTTTAATGATGGTGTTGAGCAAATACCAGGGGAAGTAGTGGGAGAGGAAGAAGAAGAAGAAGAACAAATGGAGGAGATTACCAACACACCACAAAGTGGATGGTTTAGGAATGTTGAGGAGCCATGGTTGAATAGTAGATCTCAAAAGAAGAAGAAAAATCAAGTGTTTCTTGAAGGGTATGTAGAAAATTCAGATGAAGATGAATTAGGGAGGACAAAGAGTTTGACTGATGATGATTTAGAGGAGCTTAAAGGGTGTTTAGATCTTGGTTTTGGTTTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGTCATGTTGCTAATTGGAAGATCTCTAGTCCTG : GTGATGATCCTGAAGATGTGAAAGCAAGGCTGAAATACTGGGCTCAAGCTGTGGCATGCACTGTTAAATTATGTAACTAAAAAGGGAAAAATGGAAGCCAAGAAAAGCTTAATGCAAGATGAGAGGGGAAATGAAATGATCTTTTCTTCATATGAAAGAGTACTTGTGCTGTGGTCTCTTTGCCTGGATCCTGAAAAAAAAAAGGCTATGGCCACAAGGCCAAGAAGAAGGTACCTCATGCTTTACCTGAAGATAGATTCAAAAAGAATCATGTCCATGATGGGTAGGCAAAGTTTAATCAAAATCCCAAAGTAGATGAAGAGGAAGGAAGAGATGTTTCAGGGCTAAAAGATTAACCAACACATGGACTAAAATCGATATAACTTTGTGTATCAGTTTTAGTCCCAAGATTGCAATTCTTCTTCATGTTTTAATTTTGTTTTCTTATGTAATGCTGATCAAAATACTGTTCTTGGTTATTAATAAATCAAGTTTCTTCCTTGTTAT</gDNA_template>
            <first_frame> R  R  E  K  H  S  K  K  F  G  R  K  K  N  G  N  F  F  S  S  I  I  K  I  Q  V  L  *  E  L  F  *  *  W  C  *  A  N  T  R  G  S  S  G  R  G  R  R  R  R  R  T  N  G  G  D  Y  Q  H  T  T  K  W  M  V  *  E  C  *  G  A  M  V  E  *  *  I  S  K  E  E  E  K  S  S  V  S  *  R  V  C  R  K  F  R  *  R  *  I  R  E  D  K  E  F  D  *  *  *  F  R  G  A  *  R  V  F  R  S  W  F  W  F  Q  L  *  *  N  S  *  A  L  *  Y  F  T  S  S  *  T  L  L  F  Y  E  P  K  V  P  *  *  T  A  K  V  F  *  C  Y  V  *  Y  W  F  F  W  I  W  S  C  C  *  L  E  D  L  *  S  W :   *  *  S  *  R  C  E  S  K  A  E  I  L  G  S  S  C  G  M  H  C  *  I  M  *  L  K  R  E  K  W  K  P  R  K  A  *  C  K  M  R  G  E  M  K  *  S  F  L  H  M  K  E  Y  L  C  C  G  L  F  A  W  I  L  K  K  K  R  L  W  P  Q  G  Q  E  E  G  T  S  C  F  T  *  R  *  I  Q  K  E  S  C  P  *  W  V  G  K  V  *  S  K  S  Q  S  R  *  R  G  R  K  R  C  F  R  A  K  R  L  T  N  T  W  T  K  I  D  I  T  L  C  I  S  F  S  P  K  I  A  I  L  L  H  V  L  I  L  F  S  Y  V  M  L  I  K  I  L  F  L  V  I  N  K  S  S  F  F  L  V   </first_frame>
            <second_frame>  E  E  K  N  T  Q  K  S  L  E  E  K  K  M  E  T  F  S  H  L  S  S  R  S  R  S  C  E  S  F  F  N  D  G  V  E  Q  I  P  G  E  V  V  G  E  E  E  E  E  E  E  Q  M  E  E  I  T  N  T  P  Q  S  G  W  F  R  N  V  E  E  P  W  L  N  S  R  S  Q  K  K  K  K  N  Q  V  F  L  E  G  Y  V  E  N  S  D  E  D  E  L  G  R  T  K  S  L  T  D  D  D  L  E  E  L  K  G  C  L  D  L  G  F  G  F  S  Y  D  E  I  P  E  L  C  N  T  L  P  A  L  E  L  C  Y  S  M  S  Q  K  Y  L  D  E  Q  Q  K  C  S  D  A  M  S  D  T  G  S  S  G  S  G  H  V  A  N  W  K  I  S  S  P   : G  D  D  P  E  D  V  K  A  R  L  K  Y  W  A  Q  A  V  A  C  T  V  K  L  C  N  *  K  G  K  N  G  S  Q  E  K  L  N  A  R  *  E  G  K  *  N  D  L  F  F  I  *  K  S  T  C  A  V  V  S  L  P  G  S  *  K  K  K  G  Y  G  H  K  A  K  K  K  V  P  H  A  L  P  E  D  R  F  K  K  N  H  V  H  D  G  *  A  K  F  N  Q  N  P  K  V  D  E  E  E  G  R  D  V  S  G  L  K  D  *  P  T  H  G  L  K  S  I  *  L  C  V  S  V  L  V  P  R  L  Q  F  F  F  M  F  *  F  C  F  L  M  *  C  *  S  K  Y  C  S  W  L  L  I  N  Q  V  S  S  L  L  </second_frame>
            <third_frame>   K  R  K  T  L  K  K  V  W  K  K  K  K  W  K  L  F  L  I  Y  H  Q  D  P  G  L  V  R  A  F  L  M  M  V  L  S  K  Y  Q  G  K  *  W  E  R  K  K  K  K  K  N  K  W  R  R  L  P  T  H  H  K  V  D  G  L  G  M  L  R  S  H  G  *  I  V  D  L  K  R  R  R  K  I  K  C  F  L  K  G  M  *  K  I  Q  M  K  M  N  *  G  G  Q  R  V  *  L  M  M  I  *  R  S  L  K  G  V  *  I  L  V  L  V  S  V  M  M  K  F  L  S  F  V  I  L  Y  Q  L  L  N  F  A  I  L  *  A  K  S  T  L  M  N  S  K  S  V  L  M  L  C  L  I  L  V  L  L  D  L  V  M  L  L  I  G  R  S  L  V  L  :  V  M  I  L  K  M  *  K  Q  G  *  N  T  G  L  K  L  W  H  A  L  L  N  Y  V  T  K  K  G  K  M  E  A  K  K  S  L  M  Q  D  E  R  G  N  E  M  I  F  S  S  Y  E  R  V  L  V  L  W  S  L  C  L  D  P  E  K  K  K  A  M  A  T  R  P  R  R  R  Y  L  M  L  Y  L  K  I  D  S  K  R  I  M  S  M  M  G  R  Q  S  L  I  K  I  P  K  *  M  K  R  K  E  E  M  F  Q  G  *  K  I  N  Q  H  M  D  *  N  R  Y  N  F  V  Y  Q  F  *  S  Q  D  C  N  S  S  S  C  F  N  F  V  F  L  C  N  A  D  Q  N  T  V  L  G  Y  *  *  I  K  F  L  P  C  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61449" stop="60915"/>
                    <exon start="60582" stop="60503"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>612</number_coding_nucleotides>
                  <number_encoded_amino_acids>204</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EEKNTQKSLEEKKMETFSHLSSRSRSCESFFNDGVEQIPGEVVGEEEEEEEQMEEITNTPQSGWFRNVEEPWLNSRSQKKKKNQVFLEGYVENSDEDELGRTKSLTDDDLEELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKYLDEQQKCSDAMSDTGSSGSGHVANWKISSPGDDPEDVKARLKYWAQAVACTVKLCN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="61450" e_stop="60915"/>
            <exon e_start="60654" e_stop="60642"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.981" acc_prob="0.922" e_score="0.992"/>
          <exon-only e_score="0.769"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="61450" e_stop="60915" e_length="536"/>
          </exon>
          <intron i_serial="1" don_prob="0.981" acc_prob="0.922">
            <gDNA_intron_boundary i_start="60914" i_stop="60655" i_length="260"/>
          </intron>
          <exon e_serial="2" e_score="0.769">
            <gDNA_exon_boundary e_start="60654" e_stop="60642" e_length="13"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61450" stop="60946"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202870" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61448" stop="60937"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292261" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61422" stop="61120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710657" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61381" stop="60915"/>
              <exon start="60654" stop="60642"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E439997" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAAGAGAAAAACACTCAAAAAAGTTTGGAAGAAAAAAAAATGGAAACTTTTTCTCATCTATCATCAAGATCCAGGTCTTGTGAGAGCTTTTTTAATGATGGTGTTGAGCAAATACCAGGGGAAGTAGTGGGAGAGGAAGAAGAAGAAGAAGAACAAATGGAGGAGATTACCAACACACCACAAAGTGGATGGTTTAGGAATGTTGAGGAGCCATGGTTGAATAGTAGATCTCAAAAGAAGAAGAAAAATCAAGTGTTTCTTGAAGGGTATGTAGAAAATTCAGATGAAGATGAATTAGGGAGGACAAAGAGTTTGACTGATGATGATTTAGAGGAGCTTAAAGGGTGTTTAGATCTTGGTTTTGGTTTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGTCATGTTGCTAATTGGAAGATCTCTAGTCCTG : GTGAAGATGATGA</gDNA_template>
            <first_frame> R  R  E  K  H  S  K  K  F  G  R  K  K  N  G  N  F  F  S  S  I  I  K  I  Q  V  L  *  E  L  F  *  *  W  C  *  A  N  T  R  G  S  S  G  R  G  R  R  R  R  R  T  N  G  G  D  Y  Q  H  T  T  K  W  M  V  *  E  C  *  G  A  M  V  E  *  *  I  S  K  E  E  E  K  S  S  V  S  *  R  V  C  R  K  F  R  *  R  *  I  R  E  D  K  E  F  D  *  *  *  F  R  G  A  *  R  V  F  R  S  W  F  W  F  Q  L  *  *  N  S  *  A  L  *  Y  F  T  S  S  *  T  L  L  F  Y  E  P  K  V  P  *  *  T  A  K  V  F  *  C  Y  V  *  Y  W  F  F  W  I  W  S  C  C  *  L  E  D  L  *  S  W :   *  R  *  * </first_frame>
            <second_frame>  E  E  K  N  T  Q  K  S  L  E  E  K  K  M  E  T  F  S  H  L  S  S  R  S  R  S  C  E  S  F  F  N  D  G  V  E  Q  I  P  G  E  V  V  G  E  E  E  E  E  E  E  Q  M  E  E  I  T  N  T  P  Q  S  G  W  F  R  N  V  E  E  P  W  L  N  S  R  S  Q  K  K  K  K  N  Q  V  F  L  E  G  Y  V  E  N  S  D  E  D  E  L  G  R  T  K  S  L  T  D  D  D  L  E  E  L  K  G  C  L  D  L  G  F  G  F  S  Y  D  E  I  P  E  L  C  N  T  L  P  A  L  E  L  C  Y  S  M  S  Q  K  Y  L  D  E  Q  Q  K  C  S  D  A  M  S  D  T  G  S  S  G  S  G  H  V  A  N  W  K  I  S  S  P   : G  E  D  D   </second_frame>
            <third_frame>   K  R  K  T  L  K  K  V  W  K  K  K  K  W  K  L  F  L  I  Y  H  Q  D  P  G  L  V  R  A  F  L  M  M  V  L  S  K  Y  Q  G  K  *  W  E  R  K  K  K  K  K  N  K  W  R  R  L  P  T  H  H  K  V  D  G  L  G  M  L  R  S  H  G  *  I  V  D  L  K  R  R  R  K  I  K  C  F  L  K  G  M  *  K  I  Q  M  K  M  N  *  G  G  Q  R  V  *  L  M  M  I  *  R  S  L  K  G  V  *  I  L  V  L  V  S  V  M  M  K  F  L  S  F  V  I  L  Y  Q  L  L  N  F  A  I  L  *  A  K  S  T  L  M  N  S  K  S  V  L  M  L  C  L  I  L  V  L  L  D  L  V  M  L  L  I  G  R  S  L  V  L  :  V  K  M  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61449" stop="60915"/>
                    <exon start="60654" stop="60644"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>546</number_coding_nucleotides>
                  <number_encoded_amino_acids>182</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EEKNTQKSLEEKKMETFSHLSSRSRSCESFFNDGVEQIPGEVVGEEEEEEEQMEEITNTPQSGWFRNVEEPWLNSRSQKKKKNQVFLEGYVENSDEDELGRTKSLTDDDLEELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKYLDEQQKCSDAMSDTGSSGSGHVANWKISSPGEDD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="61450" e_stop="60890"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="61450" e_stop="60890" e_length="561"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61450" stop="60946"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202870" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61448" stop="60937"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292261" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61442" stop="60890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235296" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61422" stop="61120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710657" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAAGAGAAAAACACTCAAAAAAGTTTGGAAGAAAAAAAAATGGAAACTTTTTCTCATCTATCATCAAGATCCAGGTCTTGTGAGAGCTTTTTTAATGATGGTGTTGAGCAAATACCAGGGGAAGTAGTGGGAGAGGAAGAAGAAGAAGAAGAACAAATGGAGGAGATTACCAACACACCACAAAGTGGATGGTTTAGGAATGTTGAGGAGCCATGGTTGAATAGTAGATCTCAAAAGAAGAAGAAAAATCAAGTGTTTCTTGAAGGGTATGTAGAAAATTCAGATGAAGATGAATTAGGGAGGACAAAGAGTTTGACTGATGATGATTTAGAGGAGCTTAAAGGGTGTTTAGATCTTGGTTTTGGTTTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGTCATGTTGCTAATTGGAAGATCTCTAGTCCTGGTGAGTCTTTTTTTCCCCCCTCTCT</gDNA_template>
            <first_frame> R  R  E  K  H  S  K  K  F  G  R  K  K  N  G  N  F  F  S  S  I  I  K  I  Q  V  L  *  E  L  F  *  *  W  C  *  A  N  T  R  G  S  S  G  R  G  R  R  R  R  R  T  N  G  G  D  Y  Q  H  T  T  K  W  M  V  *  E  C  *  G  A  M  V  E  *  *  I  S  K  E  E  E  K  S  S  V  S  *  R  V  C  R  K  F  R  *  R  *  I  R  E  D  K  E  F  D  *  *  *  F  R  G  A  *  R  V  F  R  S  W  F  W  F  Q  L  *  *  N  S  *  A  L  *  Y  F  T  S  S  *  T  L  L  F  Y  E  P  K  V  P  *  *  T  A  K  V  F  *  C  Y  V  *  Y  W  F  F  W  I  W  S  C  C  *  L  E  D  L  *  S  W  *  V  F  F  S  P  L  S </first_frame>
            <second_frame>  E  E  K  N  T  Q  K  S  L  E  E  K  K  M  E  T  F  S  H  L  S  S  R  S  R  S  C  E  S  F  F  N  D  G  V  E  Q  I  P  G  E  V  V  G  E  E  E  E  E  E  E  Q  M  E  E  I  T  N  T  P  Q  S  G  W  F  R  N  V  E  E  P  W  L  N  S  R  S  Q  K  K  K  K  N  Q  V  F  L  E  G  Y  V  E  N  S  D  E  D  E  L  G  R  T  K  S  L  T  D  D  D  L  E  E  L  K  G  C  L  D  L  G  F  G  F  S  Y  D  E  I  P  E  L  C  N  T  L  P  A  L  E  L  C  Y  S  M  S  Q  K  Y  L  D  E  Q  Q  K  C  S  D  A  M  S  D  T  G  S  S  G  S  G  H  V  A  N  W  K  I  S  S  P  G  E  S  F  F  P  P  S   </second_frame>
            <third_frame>   K  R  K  T  L  K  K  V  W  K  K  K  K  W  K  L  F  L  I  Y  H  Q  D  P  G  L  V  R  A  F  L  M  M  V  L  S  K  Y  Q  G  K  *  W  E  R  K  K  K  K  K  N  K  W  R  R  L  P  T  H  H  K  V  D  G  L  G  M  L  R  S  H  G  *  I  V  D  L  K  R  R  R  K  I  K  C  F  L  K  G  M  *  K  I  Q  M  K  M  N  *  G  G  Q  R  V  *  L  M  M  I  *  R  S  L  K  G  V  *  I  L  V  L  V  S  V  M  M  K  F  L  S  F  V  I  L  Y  Q  L  L  N  F  A  I  L  *  A  K  S  T  L  M  N  S  K  S  V  L  M  L  C  L  I  L  V  L  L  D  L  V  M  L  L  I  G  R  S  L  V  L  V  S  L  F  F  P  P  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61449" stop="60892"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>558</number_coding_nucleotides>
                  <number_encoded_amino_acids>186</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EEKNTQKSLEEKKMETFSHLSSRSRSCESFFNDGVEQIPGEVVGEEEEEEEQMEEITNTPQSGWFRNVEEPWLNSRSQKKKKNQVFLEGYVENSDEDELGRTKSLTDDDLEELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKYLDEQQKCSDAMSDTGSSGSGHVANWKISSPGESFFPPS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="61228" PGL_stop="61441"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61228" e_stop="61441"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="61228" e_stop="61441" e_length="214"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61228" stop="61441"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238628" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTCAACCATGGCTCCTCAACATTCCTAAACCATCCACTTTGTGGTGTGTTGGTAATCTCCTCCATTTGTTCTTCTTCTTCTTCTTCCTCTCCCACTACTTCCCCTGGTATTTGCTCAACACCATCATTAAAAAAGCTCTCACAAGACCTGGATCTTGATGATAGATGAGAAAAAGTTTCCATTTTTTTTTCTTCCAAACTTTTTTGAGTGTTT</gDNA_template>
            <first_frame> I  Q  P  W  L  L  N  I  P  K  P  S  T  L  W  C  V  G  N  L  L  H  L  F  F  F  F  F  F  L  S  H  Y  F  P  W  Y  L  L  N  T  I  I  K  K  A  L  T  R  P  G  S  *  *  *  M  R  K  S  F  H  F  F  F  F  Q  T  F  L  S  V  </first_frame>
            <second_frame>  F  N  H  G  S  S  T  F  L  N  H  P  L  C  G  V  L  V  I  S  S  I  C  S  S  S  S  S  S  S  P  T  T  S  P  G  I  C  S  T  P  S  L  K  K  L  S  Q  D  L  D  L  D  D  R  *  E  K  V  S  I  F  F  S  S  K  L  F  *  V  F </second_frame>
            <third_frame>   S  T  M  A  P  Q  H  S  *  T  I  H  F  V  V  C  W  *  S  P  P  F  V  L  L  L  L  L  P  L  P  L  L  P  L  V  F  A  Q  H  H  H  *  K  S  S  H  K  T  W  I  L  M  I  D  E  K  K  F  P  F  F  F  L  P  N  F  F  E  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0038F03.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="67322" PGL_stop="69960"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67322" e_stop="68053"/>
            <exon e_start="68782" e_stop="69063"/>
            <exon e_start="69145" e_stop="69599"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.979" acc_prob="0.945" e_score="0.998"/>
          <exon-intron don_prob="0.998" acc_prob="0.994" e_score="0.995"/>
          <exon-only e_score="0.967"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="67322" e_stop="68053" e_length="732"/>
          </exon>
          <intron i_serial="1" don_prob="0.979" acc_prob="0.945">
            <gDNA_intron_boundary i_start="68054" i_stop="68781" i_length="728"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="68782" e_stop="69063" e_length="282"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.994">
            <gDNA_intron_boundary i_start="69064" i_stop="69144" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="0.967">
            <gDNA_exon_boundary e_start="69145" e_stop="69599" e_length="455"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67322" stop="67983"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392218" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67323" stop="67784"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232888" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67323" stop="67780"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67323" stop="67660"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231111" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67770" stop="68053"/>
              <exon start="68782" stop="68929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68863" stop="69063"/>
              <exon start="69145" stop="69491"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395118" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68864" stop="69063"/>
              <exon start="69145" stop="69565"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243418" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68864" stop="69063"/>
              <exon start="69145" stop="69394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368511" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68966" stop="69063"/>
              <exon start="69145" stop="69534"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E402751" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69240" stop="69599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215344" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69310" stop="69599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215440" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTCCTATACAATTTATTTTTTCAGAATGCCCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAAGAACAAGTTGTTTCTGGAATGATGTACTATATAACACTTGTGGCAACTGATGATGGAAATAAAAAAGATTATGAAGCCAAGATTTGGGTGAAGGAATGGGAGGACTTCAAGAAAGTTATAAGCTTCAAGCTTGTTGGTAAGGATAGTGCAATAATTGGGGGCTTTACCGATGTTCCATTCCCAAACAAACGCGAGTTCCAAGATCTTACACGTTTTGCTATTCAGGATTATAATAAGAAAGAGGTTATTTACAATGACTTACTCATCTTCTATTTTTTCCTGTTAATTTCATATTCAAATTTATAATATTTTAATTTTGAACCCATTGCATGAGATATCTAATAATTATTTCATTTGAATGAACGTCATATACAATTTATTTTTCAGAATGCCCATTTGGAGTTTGTAGAAAATCTGAATGTGAAAAAACAAGTTGTTGCTGGAATGTTGTACTATATAACATTTGCAGCAACTGATGCTGGAAAGAAAAACATATATGAAACAAAGATTTGGGTGAAGGAATGGGAAGACTTCAAAAAAGTTGTAGAGTTCAAGCTTGTTGGTGATGATGGTGCAAAGCTTGGGGGGATTATCAATGTTCCATTCCCAAACAGCCCCGAGTTTCAAGATCTTGCTCGTTTTGCGGTTCAGGATTATAATAATAAAGAG : AATGCTCATTTAGAGTATGTAGAAAACTTGAATGTGAAAGAACAACTTGTTGCTGGAACGTTATACTACATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATACGAAACTAAGATTTGGGTGAAGGAATGGGAGGACTTCAAAAAAGTTGTAGAATTCAAGCTTGTTGGTGATGATAGTCCAAATCCTGGGGGCATTACCAATGTTCCATTCCCAAACCTCCCCGAGTTCAAAGATCTTGCTCGTTTTGCTGTTCAAGATTATAATAAGAAAGAG : AATGCTCATTTGGAGTTTGTAGAAAATTTGAATGTGAAGGAACAAGTTGTTGCTGGAATAATATACTATATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATATGAGACCAAGATTTTGGTGAAGGGATGGGAGAATTTCAAGGAAGTTCAAGATTTCAAGCTTGTTGGTGATGCCACTAAGTGAAATGAAACTACTTTTATCTTTGCGTGAAATAAAGCCACTTGTTTGGCATGAAGTTATTGTTATGTTTGTGACAAATAAAGCCACTTCTTTGGCATAAAATTACTATTATGTTTATGAGAAATAAAATCAGATCTATGTATAGTATCTGAAAGTATTCGATTGTCTTGTTGTCAATTGTATTTGAATAATTTTAAGTTTGTAAGATTGATAAATGCATGTTTATGGGATGATAAATATTGTTTGAATTTAATATTTTATTGCTA</gDNA_template>
            <first_frame> V  L  Y  N  L  F  F  Q  N  A  H  L  E  F  V  E  V  L  N  V  K  E  Q  V  V  S  G  M  M  Y  Y  I  T  L  V  A  T  D  D  G  N  K  K  D  Y  E  A  K  I  W  V  K  E  W  E  D  F  K  K  V  I  S  F  K  L  V  G  K  D  S  A  I  I  G  G  F  T  D  V  P  F  P  N  K  R  E  F  Q  D  L  T  R  F  A  I  Q  D  Y  N  K  K  E  V  I  Y  N  D  L  L  I  F  Y  F  F  L  L  I  S  Y  S  N  L  *  Y  F  N  F  E  P  I  A  *  D  I  *  *  L  F  H  L  N  E  R  H  I  Q  F  I  F  Q  N  A  H  L  E  F  V  E  N  L  N  V  K  K  Q  V  V  A  G  M  L  Y  Y  I  T  F  A  A  T  D  A  G  K  K  N  I  Y  E  T  K  I  W  V  K  E  W  E  D  F  K  K  V  V  E  F  K  L  V  G  D  D  G  A  K  L  G  G  I  I  N  V  P  F  P  N  S  P  E  F  Q  D  L  A  R  F  A  V  Q  D  Y  N  N  K  E  :  N  A  H  L  E  Y  V  E  N  L  N  V  K  E  Q  L  V  A  G  T  L  Y  Y  I  T  L  V  A  T  D  A  G  K  K  K  I  Y  E  T  K  I  W  V  K  E  W  E  D  F  K  K  V  V  E  F  K  L  V  G  D  D  S  P  N  P  G  G  I  T  N  V  P  F  P  N  L  P  E  F  K  D  L  A  R  F  A  V  Q  D  Y  N  K  K  E  :  N  A  H  L  E  F  V  E  N  L  N  V  K  E  Q  V  V  A  G  I  I  Y  Y  I  T  L  V  A  T  D  A  G  K  K  K  I  Y  E  T  K  I  L  V  K  G  W  E  N  F  K  E  V  Q  D  F  K  L  V  G  D  A  T  K  *  N  E  T  T  F  I  F  A  *  N  K  A  T  C  L  A  *  S  Y  C  Y  V  C  D  K  *  S  H  F  F  G  I  K  L  L  L  C  L  *  E  I  K  S  D  L  C  I  V  S  E  S  I  R  L  S  C  C  Q  L  Y  L  N  N  F  K  F  V  R  L  I  N  A  C  L  W  D  D  K  Y  C  L  N  L  I  F  Y  C   </first_frame>
            <second_frame>  S  Y  T  I  Y  F  F  R  M  P  I  W  S  L  *  K  F  *  M  *  K  N  K  L  F  L  E  *  C  T  I  *  H  L  W  Q  L  M  M  E  I  K  K  I  M  K  P  R  F  G  *  R  N  G  R  T  S  R  K  L  *  A  S  S  L  L  V  R  I  V  Q  *  L  G  A  L  P  M  F  H  S  Q  T  N  A  S  S  K  I  L  H  V  L  L  F  R  I  I  I  R  K  R  L  F  T  M  T  Y  S  S  S  I  F  S  C  *  F  H  I  Q  I  Y  N  I  L  I  L  N  P  L  H  E  I  S  N  N  Y  F  I  *  M  N  V  I  Y  N  L  F  F  R  M  P  I  W  S  L  *  K  I  *  M  *  K  N  K  L  L  L  E  C  C  T  I  *  H  L  Q  Q  L  M  L  E  R  K  T  Y  M  K  Q  R  F  G  *  R  N  G  K  T  S  K  K  L  *  S  S  S  L  L  V  M  M  V  Q  S  L  G  G  L  S  M  F  H  S  Q  T  A  P  S  F  K  I  L  L  V  L  R  F  R  I  I  I  I  K  R :   M  L  I  *  S  M  *  K  T  *  M  *  K  N  N  L  L  L  E  R  Y  T  T  *  H  L  W  Q  L  M  L  E  R  R  K  Y  T  K  L  R  F  G  *  R  N  G  R  T  S  K  K  L  *  N  S  S  L  L  V  M  I  V  Q  I  L  G  A  L  P  M  F  H  S  Q  T  S  P  S  S  K  I  L  L  V  L  L  F  K  I  I  I  R  K  R :   M  L  I  W  S  L  *  K  I  *  M  *  R  N  K  L  L  L  E  *  Y  T  I  *  H  L  W  Q  L  M  L  E  R  R  K  Y  M  R  P  R  F  W  *  R  D  G  R  I  S  R  K  F  K  I  S  S  L  L  V  M  P  L  S  E  M  K  L  L  L  S  L  R  E  I  K  P  L  V  W  H  E  V  I  V  M  F  V  T  N  K  A  T  S  L  A  *  N  Y  Y  Y  V  Y  E  K  *  N  Q  I  Y  V  *  Y  L  K  V  F  D  C  L  V  V  N  C  I  *  I  I  L  S  L  *  D  *  *  M  H  V  Y  G  M  I  N  I  V  *  I  *  Y  F  I  A  </second_frame>
            <third_frame>   P  I  Q  F  I  F  S  E  C  P  F  G  V  C  R  S  F  E  C  E  R  T  S  C  F  W  N  D  V  L  Y  N  T  C  G  N  *  *  W  K  *  K  R  L  *  S  Q  D  L  G  E  G  M  G  G  L  Q  E  S  Y  K  L  Q  A  C  W  *  G  *  C  N  N  W  G  L  Y  R  C  S  I  P  K  Q  T  R  V  P  R  S  Y  T  F  C  Y  S  G  L  *  *  E  R  G  Y  L  Q  *  L  T  H  L  L  F  F  P  V  N  F  I  F  K  F  I  I  F  *  F  *  T  H  C  M  R  Y  L  I  I  I  S  F  E  *  T  S  Y  T  I  Y  F  S  E  C  P  F  G  V  C  R  K  S  E  C  E  K  T  S  C  C  W  N  V  V  L  Y  N  I  C  S  N  *  C  W  K  E  K  H  I  *  N  K  D  L  G  E  G  M  G  R  L  Q  K  S  C  R  V  Q  A  C  W  *  *  W  C  K  A  W  G  D  Y  Q  C  S  I  P  K  Q  P  R  V  S  R  S  C  S  F  C  G  S  G  L  *  *  *  R   : E  C  S  F  R  V  C  R  K  L  E  C  E  R  T  T  C  C  W  N  V  I  L  H  N  T  C  G  N  *  C  W  K  E  E  N  I  R  N  *  D  L  G  E  G  M  G  G  L  Q  K  S  C  R  I  Q  A  C  W  *  *  *  S  K  S  W  G  H  Y  Q  C  S  I  P  K  P  P  R  V  Q  R  S  C  S  F  C  C  S  R  L  *  *  E  R   : E  C  S  F  G  V  C  R  K  F  E  C  E  G  T  S  C  C  W  N  N  I  L  Y  N  T  C  G  N  *  C  W  K  E  E  N  I  *  D  Q  D  F  G  E  G  M  G  E  F  Q  G  S  S  R  F  Q  A  C  W  *  C  H  *  V  K  *  N  Y  F  Y  L  C  V  K  *  S  H  L  F  G  M  K  L  L  L  C  L  *  Q  I  K  P  L  L  W  H  K  I  T  I  M  F  M  R  N  K  I  R  S  M  Y  S  I  *  K  Y  S  I  V  L  L  S  I  V  F  E  *  F  *  V  C  K  I  D  K  C  M  F  M  G  *  *  I  L  F  E  F  N  I  L  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67730" stop="68053"/>
                    <exon start="68782" stop="69063"/>
                    <exon start="69145" stop="69336"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>795</number_coding_nucleotides>
                  <number_encoded_amino_acids>265</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFHLNERHIQFIFQNAHLEFVENLNVKKQVVAGMLYYITFAATDAGKKNIYETKIWVKEWEDFKKVVEFKLVGDDGAKLGGIINVPFPNSPEFQDLARFAVQDYNNKENAHLEYVENLNVKEQLVAGTLYYITLVATDAGKKKIYETKIWVKEWEDFKKVVEFKLVGDDSPNPGGITNVPFPNLPEFKDLARFAVQDYNKKENAHLEFVENLNVKEQVVAGIIYYITLVATDAGKKKIYETKILVKGWENFKEVQDFKLVGDATK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67322" stop="67690"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>366</number_coding_nucleotides>
                  <number_encoded_amino_acids>122</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLYNLFFQNAHLEFVEVLNVKEQVVSGMMYYITLVATDDGNKKDYEAKIWVKEWEDFKKVISFKLVGKDSAIIGGFTDVPFPNKREFQDLTRFAIQDYNKKEVIYNDLLIFYFFLLISYSNL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="67322" e_stop="68053"/>
            <exon e_start="68782" e_stop="69063"/>
            <exon e_start="69145" e_stop="69549"/>
            <exon e_start="69929" e_stop="69959"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.979" acc_prob="0.945" e_score="0.998"/>
          <exon-intron don_prob="0.998" acc_prob="0.994" e_score="0.996"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.960"/>
          <exon-only e_score="0.677"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="67322" e_stop="68053" e_length="732"/>
          </exon>
          <intron i_serial="1" don_prob="0.979" acc_prob="0.945">
            <gDNA_intron_boundary i_start="68054" i_stop="68781" i_length="728"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="68782" e_stop="69063" e_length="282"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.994">
            <gDNA_intron_boundary i_start="69064" i_stop="69144" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="0.960">
            <gDNA_exon_boundary e_start="69145" e_stop="69549" e_length="405"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="69550" i_stop="69928" i_length="379"/>
          </intron>
          <exon e_serial="4" e_score="0.677">
            <gDNA_exon_boundary e_start="69929" e_stop="69959" e_length="31"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67322" stop="67983"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392218" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67323" stop="67784"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232888" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67323" stop="67780"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67323" stop="67660"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231111" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67770" stop="68053"/>
              <exon start="68782" stop="68929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68785" stop="69063"/>
              <exon start="69145" stop="69549"/>
              <exon start="69929" stop="69959"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747225" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68863" stop="69063"/>
              <exon start="69145" stop="69491"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395118" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68864" stop="69063"/>
              <exon start="69145" stop="69394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368511" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68966" stop="69063"/>
              <exon start="69145" stop="69534"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E402751" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTCCTATACAATTTATTTTTTCAGAATGCCCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAAGAACAAGTTGTTTCTGGAATGATGTACTATATAACACTTGTGGCAACTGATGATGGAAATAAAAAAGATTATGAAGCCAAGATTTGGGTGAAGGAATGGGAGGACTTCAAGAAAGTTATAAGCTTCAAGCTTGTTGGTAAGGATAGTGCAATAATTGGGGGCTTTACCGATGTTCCATTCCCAAACAAACGCGAGTTCCAAGATCTTACACGTTTTGCTATTCAGGATTATAATAAGAAAGAGGTTATTTACAATGACTTACTCATCTTCTATTTTTTCCTGTTAATTTCATATTCAAATTTATAATATTTTAATTTTGAACCCATTGCATGAGATATCTAATAATTATTTCATTTGAATGAACGTCATATACAATTTATTTTTCAGAATGCCCATTTGGAGTTTGTAGAAAATCTGAATGTGAAAAAACAAGTTGTTGCTGGAATGTTGTACTATATAACATTTGCAGCAACTGATGCTGGAAAGAAAAACATATATGAAACAAAGATTTGGGTGAAGGAATGGGAAGACTTCAAAAAAGTTGTAGAGTTCAAGCTTGTTGGTGATGATGGTGCAAAGCTTGGGGGGATTATCAATGTTCCATTCCCAAACAGCCCCGAGTTTCAAGATCTTGCTCGTTTTGCGGTTCAGGATTATAATAATAAAGAG : AATGCTCATTTAGAGTATGTAGAAAACTTGAATGTGAAAGAACAACTTGTTGCTGGAACGTTATACTACATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATACGAAACTAAGATTTGGGTGAAGGAATGGGAGGACTTCAAAAAAGTTGTAGAATTCAAGCTTGTTGGTGATGATAGTCCAAATCCTGGGGGCATTACCAATGTTCCATTCCCAAACCTCCCCGAGTTCAAAGATCTTGCTCGTTTTGCTGTTCAAGATTATAATAAGAAAGAG : AATGCTCATTTGGAGTTTGTAGAAAATTTGAATGTGAAGGAACAAGTTGTTGCTGGAATAATATACTATATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATATGAGACCAAGATTTTGGTGAAGGGATGGGAGAATTTCAAGGAAGTTCAAGATTTCAAGCTTGTTGGTGATGCCACTAAGTGAAATGAAACTACTTTTATCTTTGCGTGAAATAAAGCCACTTGTTTGGCATGAAGTTATTGTTATGTTTGTGACAAATAAAGCCACTTCTTTGGCATAAAATTACTATTATGTTTATGAGAAATAAAATCAGATCTATGTATAGTATCTGAAAGTATTCGATTGTCTTGTTGTCAATTGTATTTGAATAATTTTAAGTTTGTAAGATTGATAAAT : GAAGTGTTATTTTAAACACTAATAAAAAACA</gDNA_template>
            <first_frame> V  L  Y  N  L  F  F  Q  N  A  H  L  E  F  V  E  V  L  N  V  K  E  Q  V  V  S  G  M  M  Y  Y  I  T  L  V  A  T  D  D  G  N  K  K  D  Y  E  A  K  I  W  V  K  E  W  E  D  F  K  K  V  I  S  F  K  L  V  G  K  D  S  A  I  I  G  G  F  T  D  V  P  F  P  N  K  R  E  F  Q  D  L  T  R  F  A  I  Q  D  Y  N  K  K  E  V  I  Y  N  D  L  L  I  F  Y  F  F  L  L  I  S  Y  S  N  L  *  Y  F  N  F  E  P  I  A  *  D  I  *  *  L  F  H  L  N  E  R  H  I  Q  F  I  F  Q  N  A  H  L  E  F  V  E  N  L  N  V  K  K  Q  V  V  A  G  M  L  Y  Y  I  T  F  A  A  T  D  A  G  K  K  N  I  Y  E  T  K  I  W  V  K  E  W  E  D  F  K  K  V  V  E  F  K  L  V  G  D  D  G  A  K  L  G  G  I  I  N  V  P  F  P  N  S  P  E  F  Q  D  L  A  R  F  A  V  Q  D  Y  N  N  K  E  :  N  A  H  L  E  Y  V  E  N  L  N  V  K  E  Q  L  V  A  G  T  L  Y  Y  I  T  L  V  A  T  D  A  G  K  K  K  I  Y  E  T  K  I  W  V  K  E  W  E  D  F  K  K  V  V  E  F  K  L  V  G  D  D  S  P  N  P  G  G  I  T  N  V  P  F  P  N  L  P  E  F  K  D  L  A  R  F  A  V  Q  D  Y  N  K  K  E  :  N  A  H  L  E  F  V  E  N  L  N  V  K  E  Q  V  V  A  G  I  I  Y  Y  I  T  L  V  A  T  D  A  G  K  K  K  I  Y  E  T  K  I  L  V  K  G  W  E  N  F  K  E  V  Q  D  F  K  L  V  G  D  A  T  K  *  N  E  T  T  F  I  F  A  *  N  K  A  T  C  L  A  *  S  Y  C  Y  V  C  D  K  *  S  H  F  F  G  I  K  L  L  L  C  L  *  E  I  K  S  D  L  C  I  V  S  E  S  I  R  L  S  C  C  Q  L  Y  L  N  N  F  K  F  V  R  L  I  N  :  E  V  L  F  *  T  L  I  K  N  </first_frame>
            <second_frame>  S  Y  T  I  Y  F  F  R  M  P  I  W  S  L  *  K  F  *  M  *  K  N  K  L  F  L  E  *  C  T  I  *  H  L  W  Q  L  M  M  E  I  K  K  I  M  K  P  R  F  G  *  R  N  G  R  T  S  R  K  L  *  A  S  S  L  L  V  R  I  V  Q  *  L  G  A  L  P  M  F  H  S  Q  T  N  A  S  S  K  I  L  H  V  L  L  F  R  I  I  I  R  K  R  L  F  T  M  T  Y  S  S  S  I  F  S  C  *  F  H  I  Q  I  Y  N  I  L  I  L  N  P  L  H  E  I  S  N  N  Y  F  I  *  M  N  V  I  Y  N  L  F  F  R  M  P  I  W  S  L  *  K  I  *  M  *  K  N  K  L  L  L  E  C  C  T  I  *  H  L  Q  Q  L  M  L  E  R  K  T  Y  M  K  Q  R  F  G  *  R  N  G  K  T  S  K  K  L  *  S  S  S  L  L  V  M  M  V  Q  S  L  G  G  L  S  M  F  H  S  Q  T  A  P  S  F  K  I  L  L  V  L  R  F  R  I  I  I  I  K  R :   M  L  I  *  S  M  *  K  T  *  M  *  K  N  N  L  L  L  E  R  Y  T  T  *  H  L  W  Q  L  M  L  E  R  R  K  Y  T  K  L  R  F  G  *  R  N  G  R  T  S  K  K  L  *  N  S  S  L  L  V  M  I  V  Q  I  L  G  A  L  P  M  F  H  S  Q  T  S  P  S  S  K  I  L  L  V  L  L  F  K  I  I  I  R  K  R :   M  L  I  W  S  L  *  K  I  *  M  *  R  N  K  L  L  L  E  *  Y  T  I  *  H  L  W  Q  L  M  L  E  R  R  K  Y  M  R  P  R  F  W  *  R  D  G  R  I  S  R  K  F  K  I  S  S  L  L  V  M  P  L  S  E  M  K  L  L  L  S  L  R  E  I  K  P  L  V  W  H  E  V  I  V  M  F  V  T  N  K  A  T  S  L  A  *  N  Y  Y  Y  V  Y  E  K  *  N  Q  I  Y  V  *  Y  L  K  V  F  D  C  L  V  V  N  C  I  *  I  I  L  S  L  *  D  *  *  M :   K  C  Y  F  K  H  *  *  K  T </second_frame>
            <third_frame>   P  I  Q  F  I  F  S  E  C  P  F  G  V  C  R  S  F  E  C  E  R  T  S  C  F  W  N  D  V  L  Y  N  T  C  G  N  *  *  W  K  *  K  R  L  *  S  Q  D  L  G  E  G  M  G  G  L  Q  E  S  Y  K  L  Q  A  C  W  *  G  *  C  N  N  W  G  L  Y  R  C  S  I  P  K  Q  T  R  V  P  R  S  Y  T  F  C  Y  S  G  L  *  *  E  R  G  Y  L  Q  *  L  T  H  L  L  F  F  P  V  N  F  I  F  K  F  I  I  F  *  F  *  T  H  C  M  R  Y  L  I  I  I  S  F  E  *  T  S  Y  T  I  Y  F  S  E  C  P  F  G  V  C  R  K  S  E  C  E  K  T  S  C  C  W  N  V  V  L  Y  N  I  C  S  N  *  C  W  K  E  K  H  I  *  N  K  D  L  G  E  G  M  G  R  L  Q  K  S  C  R  V  Q  A  C  W  *  *  W  C  K  A  W  G  D  Y  Q  C  S  I  P  K  Q  P  R  V  S  R  S  C  S  F  C  G  S  G  L  *  *  *  R   : E  C  S  F  R  V  C  R  K  L  E  C  E  R  T  T  C  C  W  N  V  I  L  H  N  T  C  G  N  *  C  W  K  E  E  N  I  R  N  *  D  L  G  E  G  M  G  G  L  Q  K  S  C  R  I  Q  A  C  W  *  *  *  S  K  S  W  G  H  Y  Q  C  S  I  P  K  P  P  R  V  Q  R  S  C  S  F  C  C  S  R  L  *  *  E  R   : E  C  S  F  G  V  C  R  K  F  E  C  E  G  T  S  C  C  W  N  N  I  L  Y  N  T  C  G  N  *  C  W  K  E  E  N  I  *  D  Q  D  F  G  E  G  M  G  E  F  Q  G  S  S  R  F  Q  A  C  W  *  C  H  *  V  K  *  N  Y  F  Y  L  C  V  K  *  S  H  L  F  G  M  K  L  L  L  C  L  *  Q  I  K  P  L  L  W  H  K  I  T  I  M  F  M  R  N  K  I  R  S  M  Y  S  I  *  K  Y  S  I  V  L  L  S  I  V  F  E  *  F  *  V  C  K  I  D  K   : *  S  V  I  L  N  T  N  K  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67730" stop="68053"/>
                    <exon start="68782" stop="69063"/>
                    <exon start="69145" stop="69336"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>795</number_coding_nucleotides>
                  <number_encoded_amino_acids>265</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFHLNERHIQFIFQNAHLEFVENLNVKKQVVAGMLYYITFAATDAGKKNIYETKIWVKEWEDFKKVVEFKLVGDDGAKLGGIINVPFPNSPEFQDLARFAVQDYNNKENAHLEYVENLNVKEQLVAGTLYYITLVATDAGKKKIYETKIWVKEWEDFKKVVEFKLVGDDSPNPGGITNVPFPNLPEFKDLARFAVQDYNKKENAHLEFVENLNVKEQVVAGIIYYITLVATDAGKKKIYETKILVKGWENFKEVQDFKLVGDATK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67322" stop="67690"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>366</number_coding_nucleotides>
                  <number_encoded_amino_acids>122</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLYNLFFQNAHLEFVEVLNVKEQVVSGMMYYITLVATDDGNKKDYEAKIWVKEWEDFKKVISFKLVGKDSAIIGGFTDVPFPNKREFQDLTRFAIQDYNKKEVIYNDLLIFYFFLLISYSNL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="68398" e_stop="68679"/>
            <exon e_start="68782" e_stop="69063"/>
            <exon e_start="69145" e_stop="69615"/>
            <exon e_start="69942" e_stop="69960"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.945" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.989"/>
          <exon-only e_score="0.737"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="68398" e_stop="68679" e_length="282"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.945">
            <gDNA_intron_boundary i_start="68680" i_stop="68781" i_length="102"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="68782" e_stop="69063" e_length="282"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.994">
            <gDNA_intron_boundary i_start="69064" i_stop="69144" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="0.989">
            <gDNA_exon_boundary e_start="69145" e_stop="69615" e_length="471"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="69616" i_stop="69941" i_length="326"/>
          </intron>
          <exon e_serial="4" e_score="0.737">
            <gDNA_exon_boundary e_start="69942" e_stop="69960" e_length="19"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68398" stop="68679"/>
              <exon start="68782" stop="69063"/>
              <exon start="69145" stop="69615"/>
              <exon start="69942" stop="69960"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747597" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68403" stop="68679"/>
              <exon start="68782" stop="68929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239556" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68863" stop="69063"/>
              <exon start="69145" stop="69491"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395118" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68864" stop="69063"/>
              <exon start="69145" stop="69565"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243418" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68864" stop="69063"/>
              <exon start="69145" stop="69394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368511" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68966" stop="69063"/>
              <exon start="69145" stop="69534"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E402751" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69240" stop="69599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215344" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69310" stop="69599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215440" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGGCTCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAGGAACAAGTTGTTGCTGGAATGATGTACTATATAACACTTGCGGTAACTGATGCTGGAAAGAAGAAAATATATGAAGCTAACATTTGGGTGAAAGAATGGGAGCACTTCATAAAAGTTGTGGAATTTAAGCCTGTTAGTGATGATAGTGTAAAAACTGGAGACATTGTCGATGTTCCAGATCCAAACATCCCCCCACTTCAAGATCTTGCTCGTTTTGCTGTGCAGGATTATAATAAGGCACAG : AATGCTCATTTAGAGTATGTAGAAAACTTGAATGTGAAAGAACAACTTGTTGCTGGAACGTTATACTACATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATACGAAACTAAGATTTGGGTGAAGGAATGGGAGGACTTCAAAAAAGTTGTAGAATTCAAGCTTGTTGGTGATGATAGTCCAAATCCTGGGGGCATTACCAATGTTCCATTCCCAAACCTCCCCGAGTTCAAAGATCTTGCTCGTTTTGCTGTTCAAGATTATAATAAGAAAGAG : AATGCTCATTTGGAGTTTGTAGAAAATTTGAATGTGAAGGAACAAGTTGTTGCTGGAATAATATACTATATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATATGAGACCAAGATTTTGGTGAAGGGATGGGAGAATTTCAAGGAAGTTCAAGATTTCAAGCTTGTTGGTGATGCCACTAAGTGAAATGAAACTACTTTTATCTTTGCGTGAAATAAAGCCACTTGTTTGGCATGAAGTTATTGTTATGTTTGTGACAAATAAAGCCACTTCTTTGGCATAAAATTACTATTATGTTTATGAGAAATAAAATCAGATCTATGTATAGTATCTGAAAGTATTCGATTGTCTTGTTGTCAATTGTATTTGAATAATTTTAAGTTTGTAAGATTGATAAATGCATGTTTATGGGATGATAAATATTGTTTGAATTTAATATTTTATTGCTAATACGTATCTATATAT : AAACACTAATAAAAAACAA</gDNA_template>
            <first_frame> K  A  H  L  E  F  V  E  V  L  N  V  K  E  Q  V  V  A  G  M  M  Y  Y  I  T  L  A  V  T  D  A  G  K  K  K  I  Y  E  A  N  I  W  V  K  E  W  E  H  F  I  K  V  V  E  F  K  P  V  S  D  D  S  V  K  T  G  D  I  V  D  V  P  D  P  N  I  P  P  L  Q  D  L  A  R  F  A  V  Q  D  Y  N  K  A  Q  :  N  A  H  L  E  Y  V  E  N  L  N  V  K  E  Q  L  V  A  G  T  L  Y  Y  I  T  L  V  A  T  D  A  G  K  K  K  I  Y  E  T  K  I  W  V  K  E  W  E  D  F  K  K  V  V  E  F  K  L  V  G  D  D  S  P  N  P  G  G  I  T  N  V  P  F  P  N  L  P  E  F  K  D  L  A  R  F  A  V  Q  D  Y  N  K  K  E  :  N  A  H  L  E  F  V  E  N  L  N  V  K  E  Q  V  V  A  G  I  I  Y  Y  I  T  L  V  A  T  D  A  G  K  K  K  I  Y  E  T  K  I  L  V  K  G  W  E  N  F  K  E  V  Q  D  F  K  L  V  G  D  A  T  K  *  N  E  T  T  F  I  F  A  *  N  K  A  T  C  L  A  *  S  Y  C  Y  V  C  D  K  *  S  H  F  F  G  I  K  L  L  L  C  L  *  E  I  K  S  D  L  C  I  V  S  E  S  I  R  L  S  C  C  Q  L  Y  L  N  N  F  K  F  V  R  L  I  N  A  C  L  W  D  D  K  Y  C  L  N  L  I  F  Y  C  *  Y  V  S  I  Y  :  K  H  *  *  K  T  </first_frame>
            <second_frame>  R  L  I  W  S  L  *  K  F  *  M  *  R  N  K  L  L  L  E  *  C  T  I  *  H  L  R  *  L  M  L  E  R  R  K  Y  M  K  L  T  F  G  *  K  N  G  S  T  S  *  K  L  W  N  L  S  L  L  V  M  I  V  *  K  L  E  T  L  S  M  F  Q  I  Q  T  S  P  H  F  K  I  L  L  V  L  L  C  R  I  I  I  R  H  R :   M  L  I  *  S  M  *  K  T  *  M  *  K  N  N  L  L  L  E  R  Y  T  T  *  H  L  W  Q  L  M  L  E  R  R  K  Y  T  K  L  R  F  G  *  R  N  G  R  T  S  K  K  L  *  N  S  S  L  L  V  M  I  V  Q  I  L  G  A  L  P  M  F  H  S  Q  T  S  P  S  S  K  I  L  L  V  L  L  F  K  I  I  I  R  K  R :   M  L  I  W  S  L  *  K  I  *  M  *  R  N  K  L  L  L  E  *  Y  T  I  *  H  L  W  Q  L  M  L  E  R  R  K  Y  M  R  P  R  F  W  *  R  D  G  R  I  S  R  K  F  K  I  S  S  L  L  V  M  P  L  S  E  M  K  L  L  L  S  L  R  E  I  K  P  L  V  W  H  E  V  I  V  M  F  V  T  N  K  A  T  S  L  A  *  N  Y  Y  Y  V  Y  E  K  *  N  Q  I  Y  V  *  Y  L  K  V  F  D  C  L  V  V  N  C  I  *  I  I  L  S  L  *  D  *  *  M  H  V  Y  G  M  I  N  I  V  *  I  *  Y  F  I  A  N  T  Y  L  Y  I :   N  T  N  K  K  Q </second_frame>
            <third_frame>   G  S  F  G  V  C  R  S  F  E  C  E  G  T  S  C  C  W  N  D  V  L  Y  N  T  C  G  N  *  C  W  K  E  E  N  I  *  S  *  H  L  G  E  R  M  G  A  L  H  K  S  C  G  I  *  A  C  *  *  *  *  C  K  N  W  R  H  C  R  C  S  R  S  K  H  P  P  T  S  R  S  C  S  F  C  C  A  G  L  *  *  G  T   : E  C  S  F  R  V  C  R  K  L  E  C  E  R  T  T  C  C  W  N  V  I  L  H  N  T  C  G  N  *  C  W  K  E  E  N  I  R  N  *  D  L  G  E  G  M  G  G  L  Q  K  S  C  R  I  Q  A  C  W  *  *  *  S  K  S  W  G  H  Y  Q  C  S  I  P  K  P  P  R  V  Q  R  S  C  S  F  C  C  S  R  L  *  *  E  R   : E  C  S  F  G  V  C  R  K  F  E  C  E  G  T  S  C  C  W  N  N  I  L  Y  N  T  C  G  N  *  C  W  K  E  E  N  I  *  D  Q  D  F  G  E  G  M  G  E  F  Q  G  S  S  R  F  Q  A  C  W  *  C  H  *  V  K  *  N  Y  F  Y  L  C  V  K  *  S  H  L  F  G  M  K  L  L  L  C  L  *  Q  I  K  P  L  L  W  H  K  I  T  I  M  F  M  R  N  K  I  R  S  M  Y  S  I  *  K  Y  S  I  V  L  L  S  I  V  F  E  *  F  *  V  C  K  I  D  K  C  M  F  M  G  *  *  I  L  F  E  F  N  I  L  L  L  I  R  I  Y  I   : *  T  L  I  K  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68398" stop="68679"/>
                    <exon start="68782" stop="69063"/>
                    <exon start="69145" stop="69336"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>753</number_coding_nucleotides>
                  <number_encoded_amino_acids>251</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KAHLEFVEVLNVKEQVVAGMMYYITLAVTDAGKKKIYEANIWVKEWEHFIKVVEFKPVSDDSVKTGDIVDVPDPNIPPLQDLARFAVQDYNKAQNAHLEYVENLNVKEQLVAGTLYYITLVATDAGKKKIYETKIWVKEWEDFKKVVEFKLVGDDSPNPGGITNVPFPNLPEFKDLARFAVQDYNKKENAHLEFVENLNVKEQVVAGIIYYITLVATDAGKKKIYETKILVKGWENFKEVQDFKLVGDATK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="73481" PGL_stop="70905"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73481" e_stop="73474"/>
            <exon e_start="73338" e_stop="73261"/>
            <exon e_start="73145" e_stop="73072"/>
            <exon e_start="72963" e_stop="72893"/>
            <exon e_start="72308" e_stop="72255"/>
            <exon e_start="71051" e_stop="70905"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.974" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="0.962"/>
          <exon-intron don_prob="0.966" acc_prob="0.997" e_score="0.973"/>
          <exon-intron don_prob="0.999" acc_prob="0.640" e_score="0.986"/>
          <exon-intron don_prob="0.998" acc_prob="0.887" e_score="0.944"/>
          <exon-only e_score="0.925"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="73481" e_stop="73474" e_length="8"/>
          </exon>
          <intron i_serial="1" don_prob="0.974" acc_prob="0.999">
            <gDNA_intron_boundary i_start="73473" i_stop="73339" i_length="135"/>
          </intron>
          <exon e_serial="2" e_score="0.962">
            <gDNA_exon_boundary e_start="73338" e_stop="73261" e_length="78"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="73260" i_stop="73146" i_length="115"/>
          </intron>
          <exon e_serial="3" e_score="0.973">
            <gDNA_exon_boundary e_start="73145" e_stop="73072" e_length="74"/>
          </exon>
          <intron i_serial="3" don_prob="0.966" acc_prob="0.997">
            <gDNA_intron_boundary i_start="73071" i_stop="72964" i_length="108"/>
          </intron>
          <exon e_serial="4" e_score="0.986">
            <gDNA_exon_boundary e_start="72963" e_stop="72893" e_length="71"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.640">
            <gDNA_intron_boundary i_start="72892" i_stop="72309" i_length="584"/>
          </intron>
          <exon e_serial="5" e_score="0.944">
            <gDNA_exon_boundary e_start="72308" e_stop="72255" e_length="54"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.887">
            <gDNA_intron_boundary i_start="72254" i_stop="71052" i_length="1203"/>
          </intron>
          <exon e_serial="6" e_score="0.925">
            <gDNA_exon_boundary e_start="71051" e_stop="70905" e_length="147"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73481" stop="73474"/>
              <exon start="73338" stop="73261"/>
              <exon start="73145" stop="73072"/>
              <exon start="72963" stop="72893"/>
              <exon start="72308" stop="72255"/>
              <exon start="71051" stop="70905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431189" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATAAAGAG : CAATGAGGATGTTTCAAATGTTGATGTGATTAGTGCAAAAGATCTGCTCTCTTCGGGTCACACTTATTTAGACGTGAG : GACAACTGAAGAGTATAATAGAGGACATATTGATAAAGCCATAAATATTCCATACATGTTTCTCAATGAACAAG : GAAGGGTGAAAAATCCAGATTTTCTTGAGCAAGTCTCTGCAGTGTGCCAAAAGGAGGATCATCTGATTGTG : GGATGTAACAGTGGAGGGAGAGGACTTCGAGCATGCGTCGATCTCCTTAATGCG : GGGTACAAGGATGTAAGAAACTTGGAAGGAGGATACTCAGCATGGGTGGATAATGAGTTTAAAGGGGATGAATCTGCTCAACAGTTCAAAACTGCCTGCAAATTTCGTCCATGAGCAAAACATGCATTCACAAGAATTATTTTCTAT</gDNA_template>
            <first_frame> I  K  S :   N  E  D  V  S  N  V  D  V  I  S  A  K  D  L  L  S  S  G  H  T  Y  L  D  V  R :   T  T  E  E  Y  N  R  G  H  I  D  K  A  I  N  I  P  Y  M  F  L  N  E  Q   : G  R  V  K  N  P  D  F  L  E  Q  V  S  A  V  C  Q  K  E  D  H  L  I  V  :  G  C  N  S  G  G  R  G  L  R  A  C  V  D  L  L  N  A  :  G  Y  K  D  V  R  N  L  E  G  G  Y  S  A  W  V  D  N  E  F  K  G  D  E  S  A  Q  Q  F  K  T  A  C  K  F  R  P  *  A  K  H  A  F  T  R  I  I  F  Y </first_frame>
            <second_frame>  *  R   : A  M  R  M  F  Q  M  L  M  *  L  V  Q  K  I  C  S  L  R  V  T  L  I  *  T  *   : G  Q  L  K  S  I  I  E  D  I  L  I  K  P  *  I  F  H  T  C  F  S  M  N  K  :  E  G  *  K  I  Q  I  F  L  S  K  S  L  Q  C  A  K  R  R  I  I  *  L  W :   D  V  T  V  E  G  E  D  F  E  H  A  S  I  S  L  M  R :   G  T  R  M  *  E  T  W  K  E  D  T  Q  H  G  W  I  M  S  L  K  G  M  N  L  L  N  S  S  K  L  P  A  N  F  V  H  E  Q  N  M  H  S  Q  E  L  F  S   </second_frame>
            <third_frame>   K  E  :  Q  *  G  C  F  K  C  *  C  D  *  C  K  R  S  A  L  F  G  S  H  L  F  R  R  E  :  D  N  *  R  V  *  *  R  T  Y  *  *  S  H  K  Y  S  I  H  V  S  Q  *  T  R :   K  G  E  K  S  R  F  S  *  A  S  L  C  S  V  P  K  G  G  S  S  D  C   : G  M  *  Q  W  R  E  R  T  S  S  M  R  R  S  P  *  C   : G  V  Q  G  C  K  K  L  G  R  R  I  L  S  M  G  G  *  *  V  *  R  G  *  I  C  S  T  V  Q  N  C  L  Q  I  S  S  M  S  K  T  C  I  H  K  N  Y  F  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73481" stop="73474"/>
                    <exon start="73338" stop="73261"/>
                    <exon start="73145" stop="73072"/>
                    <exon start="72963" stop="72893"/>
                    <exon start="72308" stop="72255"/>
                    <exon start="71051" stop="70938"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>396</number_coding_nucleotides>
                  <number_encoded_amino_acids>132</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKSNEDVSNVDVISAKDLLSSGHTYLDVRTTEEYNRGHIDKAINIPYMFLNEQGRVKNPDFLEQVSAVCQKEDHLIVGCNSGGRGLRACVDLLNAGYKDVRNLEGGYSAWVDNEFKGDESAQQFKTACKFRP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="76958" PGL_stop="74146"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="76958" e_stop="76721"/>
            <exon e_start="76265" e_stop="75970"/>
            <exon e_start="75650" e_stop="75329"/>
            <exon e_start="74623" e_stop="74146"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.968" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="76958" e_stop="76721" e_length="238"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="76720" i_stop="76266" i_length="455"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="76265" e_stop="75970" e_length="296"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.968">
            <gDNA_intron_boundary i_start="75969" i_stop="75651" i_length="319"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="75650" e_stop="75329" e_length="322"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="75328" i_stop="74624" i_length="705"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="74623" e_stop="74146" e_length="478"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76958" stop="76721"/>
              <exon start="76265" stop="75970"/>
              <exon start="75650" stop="75409"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E571754" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76955" stop="76721"/>
              <exon start="76265" stop="75970"/>
              <exon start="75650" stop="75567"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265722" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76955" stop="76721"/>
              <exon start="76265" stop="75970"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265282" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76955" stop="76721"/>
              <exon start="76265" stop="75970"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266463" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76955" stop="76721"/>
              <exon start="76265" stop="75970"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266936" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76955" stop="76721"/>
              <exon start="76265" stop="76018"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266817" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76953" stop="76721"/>
              <exon start="76265" stop="75970"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265428" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76952" stop="76721"/>
              <exon start="76265" stop="75970"/>
              <exon start="75650" stop="75329"/>
              <exon start="74623" stop="74146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746343" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76947" stop="76721"/>
              <exon start="76265" stop="75970"/>
              <exon start="75650" stop="75484"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573451" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76936" stop="76721"/>
              <exon start="76265" stop="76016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575666" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76928" stop="76721"/>
              <exon start="76265" stop="75970"/>
              <exon start="75650" stop="75572"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265008" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76925" stop="76721"/>
              <exon start="76265" stop="76022"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544640" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76921" stop="76721"/>
              <exon start="76265" stop="75984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E304490" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76917" stop="76721"/>
              <exon start="76265" stop="75983"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265027" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76913" stop="76721"/>
              <exon start="76265" stop="75970"/>
              <exon start="75650" stop="75547"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265728" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76907" stop="76721"/>
              <exon start="76265" stop="75970"/>
              <exon start="75650" stop="75532"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296742" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76905" stop="76721"/>
              <exon start="76265" stop="75970"/>
              <exon start="75650" stop="75541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264985" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76905" stop="76721"/>
              <exon start="76265" stop="76026"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310531" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76231" stop="75970"/>
              <exon start="75650" stop="75329"/>
              <exon start="74623" stop="74460"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572349" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75611" stop="75329"/>
              <exon start="74623" stop="74436"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75606" stop="75329"/>
              <exon start="74623" stop="74148"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573866" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75537" stop="75329"/>
              <exon start="74623" stop="74159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575607" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75455" stop="75329"/>
              <exon start="74623" stop="74255"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577078" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCAATTTTCTACATCATCTTTACTTTAAGAAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAG : GTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAG : GGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGAGCCATATTCAGTATATGGCTATAAACCTTTACCCAAAATGCCCCGACCCGACTGTAACAGCTGGAGCCGTGGAACATAATGACGGCGGAGTCATCAACTTGCTTTTACAAGAATTGGGCGGCTTACATGTGCGCCGTCAGAAAGATGGACAGTGGCTTGCTGTTGAGCCCATTCCTGGTGCATTGGTTTGCATCAATGGCATGATTTTGAAG : GTGATTAGCAATGGGAAGTTAGAAAGTGGAATACATAGAGTGGCTACAAATTCAGTGAGAGATAGAATATCTCTTGGATGTTTAACTAGTCCTTCTTGTGATGGAAAATGCATAATTGAGCCTGCTAAACCACTTTTAAGTGAAACTAATCCACCTAAATACAAGTCATTTTCCTACACTGAGTATTTGAAGATTTTCTTCAGTGACACCTCTGAATTTGAAGCTGCACTCAATCCATACAAAATTTAATTAATTAATTTATCACTATGGGATAAATTGATGTGTTTCTTTATTTTGGAGGTACCAAAAATAATCATTGATGAATAAATTTTGTGTGTGTGTGTGTGTTTATTAATGTTATGTTTTGGATTTTCAATAATTTCATGCTACTATGTATTGTACTACTTCCTTTTGTAATAGTGATTTGAGTTTGTGATATAAATAAAACAATTTCAATAAATAAAGGTGTGTTTGAAGA</gDNA_template>
            <first_frame> F  N  F  L  H  H  L  Y  F  K  K  T  K  R  N  G  I  S  D  L  *  L  G  F  T  S  E  H  C  A  *  K  V  C  G  A  Y  *  E  K  I  E  C  K  C  P  N  W  *  R  H  S  S  Y  *  F  V  T  S  *  F  C  P  H  S  *  T  N  H  Q  S  F  S  R  L  W  S  F  S   : G  D  *  P  W  S  V  T  R  V  D  W  *  C  P  *  S  L  *  *  I  F  Q  V  A  N  *  G  L  G  K  V  Y  *  R  R  R  V  E  *  I  *  A  K  S  *  P  E  T  K  A  L  Y  *  K  G  I  *  A  *  E  E  W  *  E  *  *  R  S  H  F  L  E  R  H  F  C  S  L  Y  S  S  Y  Q  R  R  *  N  *  F  L  A  *  K  A  S  K  I  *  :  G  S  D  W  K  I  *  *  G  S  E  E  G  K  F  E  N  F  G  A  N  V  *  R  I  G  T  *  K  G  L  L  C  K  *  A  E  P  Y  S  V  Y  G  Y  K  P  L  P  K  M  P  R  P  D  C  N  S  W  S  R  G  T  *  *  R  R  S  H  Q  L  A  F  T  R  I  G  R  L  T  C  A  P  S  E  R  W  T  V  A  C  C  *  A  H  S  W  C  I  G  L  H  Q  W  H  D  F  E   : G  D  *  Q  W  E  V  R  K  W  N  T  *  S  G  Y  K  F  S  E  R  *  N  I  S  W  M  F  N  *  S  F  L  *  W  K  M  H  N  *  A  C  *  T  T  F  K  *  N  *  S  T  *  I  Q  V  I  F  L  H  *  V  F  E  D  F  L  Q  *  H  L  *  I  *  S  C  T  Q  S  I  Q  N  L  I  N  *  F  I  T  M  G  *  I  D  V  F  L  Y  F  G  G  T  K  N  N  H  *  *  I  N  F  V  C  V  C  V  F  I  N  V  M  F  W  I  F  N  N  F  M  L  L  C  I  V  L  L  P  F  V  I  V  I  *  V  C  D  I  N  K  T  I  S  I  N  K  G  V  F  E   </first_frame>
            <second_frame>  S  I  F  Y  I  I  F  T  L  R  K  L  K  E  M  A  S  L  I  S  S  W  A  S  Q  V  N  T  V  P  E  R  Y  V  V  P  T  E  K  R  L  N  V  N  V  P  I  G  K  D  I  P  V  I  D  L  S  H  P  N  S  A  L  I  A  E  Q  I  I  K  A  S  Q  D  Y  G  V  F  Q  :  V  I  N  H  G  V  S  Q  E  L  I  G  D  V  L  E  V  C  D  E  F  F  K  L  P  I  E  D  L  E  K  Y  T  E  E  E  E  L  S  E  F  E  P  N  L  D  Q  K  P  K  L  Y  I  E  K  E  Y  K  P  K  K  N  G  K  N  D  K  E  V  I  F  W  K  D  T  F  A  H  C  T  H  P  T  K  E  D  R  I  N  S  W  P  E  K  P  A  K  Y  R :   E  V  I  G  K  Y  S  E  G  V  R  K  A  N  L  R  I  L  E  L  M  C  E  G  L  G  L  E  K  D  Y  F  A  N  E  L  S  H  I  Q  Y  M  A  I  N  L  Y  P  K  C  P  D  P  T  V  T  A  G  A  V  E  H  N  D  G  G  V  I  N  L  L  L  Q  E  L  G  G  L  H  V  R  R  Q  K  D  G  Q  W  L  A  V  E  P  I  P  G  A  L  V  C  I  N  G  M  I  L  K  :  V  I  S  N  G  K  L  E  S  G  I  H  R  V  A  T  N  S  V  R  D  R  I  S  L  G  C  L  T  S  P  S  C  D  G  K  C  I  I  E  P  A  K  P  L  L  S  E  T  N  P  P  K  Y  K  S  F  S  Y  T  E  Y  L  K  I  F  F  S  D  T  S  E  F  E  A  A  L  N  P  Y  K  I  *  L  I  N  L  S  L  W  D  K  L  M  C  F  F  I  L  E  V  P  K  I  I  I  D  E  *  I  L  C  V  C  V  C  L  L  M  L  C  F  G  F  S  I  I  S  C  Y  Y  V  L  Y  Y  F  L  L  *  *  *  F  E  F  V  I  *  I  K  Q  F  Q  *  I  K  V  C  L  K  </second_frame>
            <third_frame>   Q  F  S  T  S  S  L  L  *  E  N  *  K  K  W  H  L  *  S  L  A  G  L  H  K  *  T  L  C  L  K  G  M  W  C  L  L  R  K  D  *  M  *  M  S  Q  L  V  K  T  F  Q  L  L  I  C  H  I  L  I  L  P  S  *  L  N  K  S  S  K  L  L  K  T  M  E  F  F  R :   *  L  T  M  E  C  H  K  S  *  L  V  M  S  L  K  F  V  M  N  F  S  S  C  Q  L  R  T  W  K  S  I  L  K  K  K  S  *  V  N  L  S  Q  I  L  T  R  N  Q  S  F  I  L  K  R  N  I  S  L  R  R  M  V  R  M  I  K  K  S  F  F  G  K  T  L  L  L  I  V  L  I  L  P  K  K  I  E  L  I  L  G  L  K  S  Q  Q  N  I   : G  K  *  L  E  N  I  V  R  E  *  G  R  Q  I  *  E  F  W  S  *  C  V  K  D  W  D  L  K  R  I  T  L  Q  M  S  *  A  I  F  S  I  W  L  *  T  F  T  Q  N  A  P  T  R  L  *  Q  L  E  P  W  N  I  M  T  A  E  S  S  T  C  F  Y  K  N  W  A  A  Y  M  C  A  V  R  K  M  D  S  G  L  L  L  S  P  F  L  V  H  W  F  A  S  M  A  *  F  *  R :   *  L  A  M  G  S  *  K  V  E  Y  I  E  W  L  Q  I  Q  *  E  I  E  Y  L  L  D  V  *  L  V  L  L  V  M  E  N  A  *  L  S  L  L  N  H  F  *  V  K  L  I  H  L  N  T  S  H  F  P  T  L  S  I  *  R  F  S  S  V  T  P  L  N  L  K  L  H  S  I  H  T  K  F  N  *  L  I  Y  H  Y  G  I  N  *  C  V  S  L  F  W  R  Y  Q  K  *  S  L  M  N  K  F  C  V  C  V  C  V  Y  *  C  Y  V  L  D  F  Q  *  F  H  A  T  M  Y  C  T  T  S  F  C  N  S  D  L  S  L  *  Y  K  *  N  N  F  N  K  *  R  C  V  *  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76957" stop="76721"/>
                    <exon start="76265" stop="75970"/>
                    <exon start="75650" stop="75329"/>
                    <exon start="74623" stop="74375"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1101</number_coding_nucleotides>
                  <number_encoded_amino_acids>367</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIFYIIFTLRKLKEMASLISSWASQVNTVPERYVVPTEKRLNVNVPIGKDIPVIDLSHPNSALIAEQIIKASQDYGVFQVINHGVSQELIGDVLEVCDEFFKLPIEDLEKYTEEEELSEFEPNLDQKPKLYIEKEYKPKKNGKNDKEVIFWKDTFAHCTHPTKEDRINSWPEKPAKYREVIGKYSEGVRKANLRILELMCEGLGLEKDYFANELSHIQYMAINLYPKCPDPTVTAGAVEHNDGGVINLLLQELGGLHVRRQKDGQWLAVEPIPGALVCINGMILKVISNGKLESGIHRVATNSVRDRISLGCLTSPSCDGKCIIEPAKPLLSETNPPKYKSFSYTEYLKIFFSDTSEFEAALNPYKI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="76372" e_stop="76365"/>
            <exon e_start="76265" e_stop="75970"/>
            <exon e_start="75650" e_stop="75329"/>
            <exon e_start="74623" e_stop="74148"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.063" acc_prob="0.998" e_score="0.750"/>
          <exon-intron don_prob="1.000" acc_prob="0.968" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="0.997"/>
          <exon-only e_score="0.910"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.750">
            <gDNA_exon_boundary e_start="76372" e_stop="76365" e_length="8"/>
          </exon>
          <intron i_serial="1" don_prob="0.063" acc_prob="0.998">
            <gDNA_intron_boundary i_start="76364" i_stop="76266" i_length="99"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="76265" e_stop="75970" e_length="296"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.968">
            <gDNA_intron_boundary i_start="75969" i_stop="75651" i_length="319"/>
          </intron>
          <exon e_serial="3" e_score="0.997">
            <gDNA_exon_boundary e_start="75650" e_stop="75329" e_length="322"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="75328" i_stop="74624" i_length="705"/>
          </intron>
          <exon e_serial="4" e_score="0.910">
            <gDNA_exon_boundary e_start="74623" e_stop="74148" e_length="476"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76372" stop="76365"/>
              <exon start="76265" stop="75970"/>
              <exon start="75650" stop="75329"/>
              <exon start="74623" stop="74589"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265729" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76372" stop="76365"/>
              <exon start="76265" stop="75970"/>
              <exon start="75650" stop="75498"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265101" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76372" stop="76365"/>
              <exon start="76265" stop="75970"/>
              <exon start="75650" stop="75498"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266130" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76231" stop="75970"/>
              <exon start="75650" stop="75329"/>
              <exon start="74623" stop="74460"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572349" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75611" stop="75329"/>
              <exon start="74623" stop="74436"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75606" stop="75329"/>
              <exon start="74623" stop="74148"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573866" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75537" stop="75329"/>
              <exon start="74623" stop="74159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575607" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75455" stop="75329"/>
              <exon start="74623" stop="74255"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577078" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATTACAG : GTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAG : GGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGAGCCATATTCAGTATATGGCTATAAACCTTTACCCAAAATGCCCCGACCCGACTGTAACAGCTGGAGCCGTGGAACATAATGACGGCGGAGTCATCAACTTGCTTTTACAAGAATTGGGCGGCTTACATGTGCGCCGTCAGAAAGATGGACAGTGGCTTGCTGTTGAGCCCATTCCTGGTGCATTGGTTTGCATCAATGGCATGATTTTGAAG : GTGATTAGCAATGGGAAGTTAGAAAGTGGAATACATAGAGTGGCTACAAATTCAGTGAGAGATAGAATATCTCTTGGATGTTTAACTAGTCCTTCTTGTGATGGAAAATGCATAATTGAGCCTGCTAAACCACTTTTAAGTGAAACTAATCCACCTAAATACAAGTCATTTTCCTACACTGAGTATTTGAAGATTTTCTTCAGTGACACCTCTGAATTTGAAGCTGCACTCAATCCATACAAAATTTAATTAATTAATTTATCACTATGGGATAAATTGATGTGTTTCTTTATTTTGGAGGTACCAAAAATAATCATTGATGAATAAATTTTGTGTGTGTGTGTGTGTTTATTAATGTTATGTTTTGGATTTTCAATAATTTCATGCTACTATGTATTGTACTACTTCCTTTTGTAATAGTGATTTGAGTTTGTGATATAAATAAAACAATTTCAATAAATAAAGGTGTGTTTGAA</gDNA_template>
            <first_frame> Y  Y  R :   *  L  T  M  E  C  H  K  S  *  L  V  M  S  L  K  F  V  M  N  F  S  S  C  Q  L  R  T  W  K  S  I  L  K  K  K  S  *  V  N  L  S  Q  I  L  T  R  N  Q  S  F  I  L  K  R  N  I  S  L  R  R  M  V  R  M  I  K  K  S  F  F  G  K  T  L  L  L  I  V  L  I  L  P  K  K  I  E  L  I  L  G  L  K  S  Q  Q  N  I   : G  K  *  L  E  N  I  V  R  E  *  G  R  Q  I  *  E  F  W  S  *  C  V  K  D  W  D  L  K  R  I  T  L  Q  M  S  *  A  I  F  S  I  W  L  *  T  F  T  Q  N  A  P  T  R  L  *  Q  L  E  P  W  N  I  M  T  A  E  S  S  T  C  F  Y  K  N  W  A  A  Y  M  C  A  V  R  K  M  D  S  G  L  L  L  S  P  F  L  V  H  W  F  A  S  M  A  *  F  *  R :   *  L  A  M  G  S  *  K  V  E  Y  I  E  W  L  Q  I  Q  *  E  I  E  Y  L  L  D  V  *  L  V  L  L  V  M  E  N  A  *  L  S  L  L  N  H  F  *  V  K  L  I  H  L  N  T  S  H  F  P  T  L  S  I  *  R  F  S  S  V  T  P  L  N  L  K  L  H  S  I  H  T  K  F  N  *  L  I  Y  H  Y  G  I  N  *  C  V  S  L  F  W  R  Y  Q  K  *  S  L  M  N  K  F  C  V  C  V  C  V  Y  *  C  Y  V  L  D  F  Q  *  F  H  A  T  M  Y  C  T  T  S  F  C  N  S  D  L  S  L  *  Y  K  *  N  N  F  N  K  *  R  C  V  *  </first_frame>
            <second_frame>  I  T   : G  D  *  P  W  S  V  T  R  V  D  W  *  C  P  *  S  L  *  *  I  F  Q  V  A  N  *  G  L  G  K  V  Y  *  R  R  R  V  E  *  I  *  A  K  S  *  P  E  T  K  A  L  Y  *  K  G  I  *  A  *  E  E  W  *  E  *  *  R  S  H  F  L  E  R  H  F  C  S  L  Y  S  S  Y  Q  R  R  *  N  *  F  L  A  *  K  A  S  K  I  *  :  G  S  D  W  K  I  *  *  G  S  E  E  G  K  F  E  N  F  G  A  N  V  *  R  I  G  T  *  K  G  L  L  C  K  *  A  E  P  Y  S  V  Y  G  Y  K  P  L  P  K  M  P  R  P  D  C  N  S  W  S  R  G  T  *  *  R  R  S  H  Q  L  A  F  T  R  I  G  R  L  T  C  A  P  S  E  R  W  T  V  A  C  C  *  A  H  S  W  C  I  G  L  H  Q  W  H  D  F  E   : G  D  *  Q  W  E  V  R  K  W  N  T  *  S  G  Y  K  F  S  E  R  *  N  I  S  W  M  F  N  *  S  F  L  *  W  K  M  H  N  *  A  C  *  T  T  F  K  *  N  *  S  T  *  I  Q  V  I  F  L  H  *  V  F  E  D  F  L  Q  *  H  L  *  I  *  S  C  T  Q  S  I  Q  N  L  I  N  *  F  I  T  M  G  *  I  D  V  F  L  Y  F  G  G  T  K  N  N  H  *  *  I  N  F  V  C  V  C  V  F  I  N  V  M  F  W  I  F  N  N  F  M  L  L  C  I  V  L  L  P  F  V  I  V  I  *  V  C  D  I  N  K  T  I  S  I  N  K  G  V  F  E </second_frame>
            <third_frame>   L  Q  :  V  I  N  H  G  V  S  Q  E  L  I  G  D  V  L  E  V  C  D  E  F  F  K  L  P  I  E  D  L  E  K  Y  T  E  E  E  E  L  S  E  F  E  P  N  L  D  Q  K  P  K  L  Y  I  E  K  E  Y  K  P  K  K  N  G  K  N  D  K  E  V  I  F  W  K  D  T  F  A  H  C  T  H  P  T  K  E  D  R  I  N  S  W  P  E  K  P  A  K  Y  R :   E  V  I  G  K  Y  S  E  G  V  R  K  A  N  L  R  I  L  E  L  M  C  E  G  L  G  L  E  K  D  Y  F  A  N  E  L  S  H  I  Q  Y  M  A  I  N  L  Y  P  K  C  P  D  P  T  V  T  A  G  A  V  E  H  N  D  G  G  V  I  N  L  L  L  Q  E  L  G  G  L  H  V  R  R  Q  K  D  G  Q  W  L  A  V  E  P  I  P  G  A  L  V  C  I  N  G  M  I  L  K  :  V  I  S  N  G  K  L  E  S  G  I  H  R  V  A  T  N  S  V  R  D  R  I  S  L  G  C  L  T  S  P  S  C  D  G  K  C  I  I  E  P  A  K  P  L  L  S  E  T  N  P  P  K  Y  K  S  F  S  Y  T  E  Y  L  K  I  F  F  S  D  T  S  E  F  E  A  A  L  N  P  Y  K  I  *  L  I  N  L  S  L  W  D  K  L  M  C  F  F  I  L  E  V  P  K  I  I  I  D  E  *  I  L  C  V  C  V  C  L  L  M  L  C  F  G  F  S  I  I  S  C  Y  Y  V  L  Y  Y  F  L  L  *  *  *  F  E  F  V  I  *  I  K  Q  F  Q  *  I  K  V  C  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76370" stop="76365"/>
                    <exon start="76265" stop="75970"/>
                    <exon start="75650" stop="75329"/>
                    <exon start="74623" stop="74375"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>870</number_coding_nucleotides>
                  <number_encoded_amino_acids>290</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LQVINHGVSQELIGDVLEVCDEFFKLPIEDLEKYTEEEELSEFEPNLDQKPKLYIEKEYKPKKNGKNDKEVIFWKDTFAHCTHPTKEDRINSWPEKPAKYREVIGKYSEGVRKANLRILELMCEGLGLEKDYFANELSHIQYMAINLYPKCPDPTVTAGAVEHNDGGVINLLLQELGGLHVRRQKDGQWLAVEPIPGALVCINGMILKVISNGKLESGIHRVATNSVRDRISLGCLTSPSCDGKCIIEPAKPLLSETNPPKYKSFSYTEYLKIFFSDTSEFEAALNPYKI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="85518" PGL_stop="90118"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85518" e_stop="85652"/>
            <exon e_start="85799" e_stop="85882"/>
            <exon e_start="85989" e_stop="86046"/>
            <exon e_start="87178" e_stop="87302"/>
            <exon e_start="87423" e_stop="87467"/>
            <exon e_start="87591" e_stop="87639"/>
            <exon e_start="87773" e_stop="87882"/>
            <exon e_start="88116" e_stop="88192"/>
            <exon e_start="88312" e_stop="88362"/>
            <exon e_start="88498" e_stop="88562"/>
            <exon e_start="88643" e_stop="88797"/>
            <exon e_start="88884" e_stop="88924"/>
            <exon e_start="89013" e_stop="89067"/>
            <exon e_start="89155" e_stop="89211"/>
            <exon e_start="89307" e_stop="89549"/>
            <exon e_start="90097" e_stop="90118"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.995" e_score="0.956"/>
          <exon-intron don_prob="0.998" acc_prob="0.921" e_score="0.988"/>
          <exon-intron don_prob="0.972" acc_prob="0.555" e_score="0.931"/>
          <exon-intron don_prob="0.955" acc_prob="0.998" e_score="0.984"/>
          <exon-intron don_prob="0.993" acc_prob="0.916" e_score="0.911"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.998" e_score="0.991"/>
          <exon-intron don_prob="0.993" acc_prob="0.998" e_score="0.948"/>
          <exon-intron don_prob="0.984" acc_prob="0.989" e_score="0.961"/>
          <exon-intron don_prob="0.981" acc_prob="0.986" e_score="0.938"/>
          <exon-intron don_prob="0.993" acc_prob="0.932" e_score="0.955"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="0.976"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="0.964"/>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="0.912"/>
          <exon-intron don_prob="0.000" acc_prob="0.524" e_score="0.872"/>
          <exon-only e_score="0.591"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.956">
            <gDNA_exon_boundary e_start="85518" e_stop="85652" e_length="135"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.995">
            <gDNA_intron_boundary i_start="85653" i_stop="85798" i_length="146"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="85799" e_stop="85882" e_length="84"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.921">
            <gDNA_intron_boundary i_start="85883" i_stop="85988" i_length="106"/>
          </intron>
          <exon e_serial="3" e_score="0.931">
            <gDNA_exon_boundary e_start="85989" e_stop="86046" e_length="58"/>
          </exon>
          <intron i_serial="3" don_prob="0.972" acc_prob="0.555">
            <gDNA_intron_boundary i_start="86047" i_stop="87177" i_length="1131"/>
          </intron>
          <exon e_serial="4" e_score="0.984">
            <gDNA_exon_boundary e_start="87178" e_stop="87302" e_length="125"/>
          </exon>
          <intron i_serial="4" don_prob="0.955" acc_prob="0.998">
            <gDNA_intron_boundary i_start="87303" i_stop="87422" i_length="120"/>
          </intron>
          <exon e_serial="5" e_score="0.911">
            <gDNA_exon_boundary e_start="87423" e_stop="87467" e_length="45"/>
          </exon>
          <intron i_serial="5" don_prob="0.993" acc_prob="0.916">
            <gDNA_intron_boundary i_start="87468" i_stop="87590" i_length="123"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="87591" e_stop="87639" e_length="49"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="87640" i_stop="87772" i_length="133"/>
          </intron>
          <exon e_serial="7" e_score="0.991">
            <gDNA_exon_boundary e_start="87773" e_stop="87882" e_length="110"/>
          </exon>
          <intron i_serial="7" don_prob="0.971" acc_prob="0.998">
            <gDNA_intron_boundary i_start="87883" i_stop="88115" i_length="233"/>
          </intron>
          <exon e_serial="8" e_score="0.948">
            <gDNA_exon_boundary e_start="88116" e_stop="88192" e_length="77"/>
          </exon>
          <intron i_serial="8" don_prob="0.993" acc_prob="0.998">
            <gDNA_intron_boundary i_start="88193" i_stop="88311" i_length="119"/>
          </intron>
          <exon e_serial="9" e_score="0.961">
            <gDNA_exon_boundary e_start="88312" e_stop="88362" e_length="51"/>
          </exon>
          <intron i_serial="9" don_prob="0.984" acc_prob="0.989">
            <gDNA_intron_boundary i_start="88363" i_stop="88497" i_length="135"/>
          </intron>
          <exon e_serial="10" e_score="0.938">
            <gDNA_exon_boundary e_start="88498" e_stop="88562" e_length="65"/>
          </exon>
          <intron i_serial="10" don_prob="0.981" acc_prob="0.986">
            <gDNA_intron_boundary i_start="88563" i_stop="88642" i_length="80"/>
          </intron>
          <exon e_serial="11" e_score="0.955">
            <gDNA_exon_boundary e_start="88643" e_stop="88797" e_length="155"/>
          </exon>
          <intron i_serial="11" don_prob="0.993" acc_prob="0.932">
            <gDNA_intron_boundary i_start="88798" i_stop="88883" i_length="86"/>
          </intron>
          <exon e_serial="12" e_score="0.976">
            <gDNA_exon_boundary e_start="88884" e_stop="88924" e_length="41"/>
          </exon>
          <intron i_serial="12" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="88925" i_stop="89012" i_length="88"/>
          </intron>
          <exon e_serial="13" e_score="0.964">
            <gDNA_exon_boundary e_start="89013" e_stop="89067" e_length="55"/>
          </exon>
          <intron i_serial="13" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="89068" i_stop="89154" i_length="87"/>
          </intron>
          <exon e_serial="14" e_score="0.912">
            <gDNA_exon_boundary e_start="89155" e_stop="89211" e_length="57"/>
          </exon>
          <intron i_serial="14" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="89212" i_stop="89306" i_length="95"/>
          </intron>
          <exon e_serial="15" e_score="0.872">
            <gDNA_exon_boundary e_start="89307" e_stop="89549" e_length="243"/>
          </exon>
          <intron i_serial="15" don_prob="0.000" acc_prob="0.524">
            <gDNA_intron_boundary i_start="89550" i_stop="90096" i_length="547"/>
          </intron>
          <exon e_serial="16" e_score="0.591">
            <gDNA_exon_boundary e_start="90097" e_stop="90118" e_length="22"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85518" stop="85652"/>
              <exon start="85799" stop="85882"/>
              <exon start="85989" stop="86046"/>
              <exon start="87178" stop="87302"/>
              <exon start="87423" stop="87467"/>
              <exon start="87591" stop="87639"/>
              <exon start="87773" stop="87882"/>
              <exon start="88116" stop="88192"/>
              <exon start="88312" stop="88362"/>
              <exon start="88498" stop="88562"/>
              <exon start="88643" stop="88797"/>
              <exon start="88884" stop="88924"/>
              <exon start="89013" stop="89067"/>
              <exon start="89155" stop="89211"/>
              <exon start="89307" stop="89549"/>
              <exon start="90097" stop="90118"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E624186" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAATCCATTGAAAATGCATAAATTATTTGCAGTAAGGTCCTTGAGTTCTACCATAGCCAAAAACTTCAAGTCCCTACAAAATCAACAAGCTGCTTTTTCAACTTCATTACTATTGGATGATACTCAAAAACAG : TTTAAAGAAAGTGTAGCAAAATTTGCTCAAGAGAATATAGCTCCTTATGCTGAAAAGATTGATAGAACAAACAGTTTCCCAAAG : GAGATTAACTTGTGGAAATTGATGGGAGACTTTAATTTACATGGAATTACAGCACCAG : AGGAATATGGTGGTCTCAACCTTGGATATTTATATCATTGCATTGCCTTAGAAGAAATTAGTCGTGCATCTGGTGCTGTTGCTGTTTCCTATGGTGTTCAATCCAACGTTTGCATTAACCAATTG : GTTAGAAATGGAACCCCTGAGCAGAAACAAAAATATTTGCCAAAG : CTTATAAGTGGGGATCACATTGGGGCTCTAGCCATGAGTGAACCAAATG : CTGGGTCAGATGTTGTTAGCATGAAGTGTCGAGCCGATCGTGTCGATGGTGGCTATGTTTTAAATGGAAATAAAATGTGGTGCACCAATGGTCCTATCGCTAATACTTTG : ATTGTTTATGCAAAAACGGATACTACTGCTGGTTCTAAAGGAATTACAGCATTTATAATCGAAAAAGAAATGTCAGG : ATTCTCAACTGCACAAAAATTGGACAAACTTGGGATGAGAGGAAGCGATAC : GTGTGAACTTGTATTCGAGAATTGCTTTGTTCCTAAGGAAAATGTTTTAGGCCACGAAGGAAAAG : GAGTGTATGTTTTAATGTCGGGGCTAGATTTGGAACGACTTATTTTAGCAGCAGGACCTATTGGAATAATGCAAGCATGTATGGATATTGTTATTCCTTACGTTCAACAAAGGGAGCAATTTGGAAGACCAATCGGCGAATTTCAACTTATACAG : GGAAAACTAGCTGACATGTATACTGCTTTACAATCTTCAAG : ATCATATGTGTATGCTGTTGCAAAGGACTGTGACAATGGGAAGATTGATCCAAAG : GATTGTTCTGGGACTATACTACTGGCAGCTGAAAGAGCCACTCAAGTAGCTCTCCAG : GCAATTCAATGTCTAGGTGGAAATGGATATATAAATGAGTATCCAACAGGACGTTTACTGCGAGATGCCAAAATGTATGAGATTGCAGCAGGAACTAGTGAAATAAGAAGAATTATAATTGGTCGTGAGCTATTTAAACATCAATAATTAGTTACAAATTAAAATTAATTAGGGGATCCTACATGATTTAATTTCTTTAAAAAAAAAATTGTATGTTCAATCAACAAATTATATGTCACGTAT : ATGAAAGTACAAAAAGGCACAA</gDNA_template>
            <first_frame> K  N  P  L  K  M  H  K  L  F  A  V  R  S  L  S  S  T  I  A  K  N  F  K  S  L  Q  N  Q  Q  A  A  F  S  T  S  L  L  L  D  D  T  Q  K  Q  :  F  K  E  S  V  A  K  F  A  Q  E  N  I  A  P  Y  A  E  K  I  D  R  T  N  S  F  P  K  :  E  I  N  L  W  K  L  M  G  D  F  N  L  H  G  I  T  A  P   : E  E  Y  G  G  L  N  L  G  Y  L  Y  H  C  I  A  L  E  E  I  S  R  A  S  G  A  V  A  V  S  Y  G  V  Q  S  N  V  C  I  N  Q  L  :  V  R  N  G  T  P  E  Q  K  Q  K  Y  L  P  K  :  L  I  S  G  D  H  I  G  A  L  A  M  S  E  P  N   : A  G  S  D  V  V  S  M  K  C  R  A  D  R  V  D  G  G  Y  V  L  N  G  N  K  M  W  C  T  N  G  P  I  A  N  T  L  :  I  V  Y  A  K  T  D  T  T  A  G  S  K  G  I  T  A  F  I  I  E  K  E  M  S  G :   F  S  T  A  Q  K  L  D  K  L  G  M  R  G  S  D  T :   C  E  L  V  F  E  N  C  F  V  P  K  E  N  V  L  G  H  E  G  K   : G  V  Y  V  L  M  S  G  L  D  L  E  R  L  I  L  A  A  G  P  I  G  I  M  Q  A  C  M  D  I  V  I  P  Y  V  Q  Q  R  E  Q  F  G  R  P  I  G  E  F  Q  L  I  Q  :  G  K  L  A  D  M  Y  T  A  L  Q  S  S  R :   S  Y  V  Y  A  V  A  K  D  C  D  N  G  K  I  D  P  K  :  D  C  S  G  T  I  L  L  A  A  E  R  A  T  Q  V  A  L  Q  :  A  I  Q  C  L  G  G  N  G  Y  I  N  E  Y  P  T  G  R  L  L  R  D  A  K  M  Y  E  I  A  A  G  T  S  E  I  R  R  I  I  I  G  R  E  L  F  K  H  Q  *  L  V  T  N  *  N  *  L  G  D  P  T  *  F  N  F  F  K  K  K  I  V  C  S  I  N  K  L  Y  V  T  Y  :  M  K  V  Q  K  G  T  </first_frame>
            <second_frame>  K  I  H  *  K  C  I  N  Y  L  Q  *  G  P  *  V  L  P  *  P  K  T  S  S  P  Y  K  I  N  K  L  L  F  Q  L  H  Y  Y  W  M  I  L  K  N  S :   L  K  K  V  *  Q  N  L  L  K  R  I  *  L  L  M  L  K  R  L  I  E  Q  T  V  S  Q  R :   R  L  T  C  G  N  *  W  E  T  L  I  Y  M  E  L  Q  H  Q  :  R  N  M  V  V  S  T  L  D  I  Y  I  I  A  L  P  *  K  K  L  V  V  H  L  V  L  L  L  F  P  M  V  F  N  P  T  F  A  L  T  N  W :   L  E  M  E  P  L  S  R  N  K  N  I  C  Q  S :   L  *  V  G  I  T  L  G  L  *  P  *  V  N  Q  M  :  L  G  Q  M  L  L  A  *  S  V  E  P  I  V  S  M  V  A  M  F  *  M  E  I  K  C  G  A  P  M  V  L  S  L  I  L  * :   L  F  M  Q  K  R  I  L  L  L  V  L  K  E  L  Q  H  L  *  S  K  K  K  C  Q   : D  S  Q  L  H  K  N  W  T  N  L  G  *  E  E  A  I   : R  V  N  L  Y  S  R  I  A  L  F  L  R  K  M  F  *  A  T  K  E  K  :  E  C  M  F  *  C  R  G  *  I  W  N  D  L  F  *  Q  Q  D  L  L  E  *  C  K  H  V  W  I  L  L  F  L  T  F  N  K  G  S  N  L  E  D  Q  S  A  N  F  N  L  Y  R :   E  N  *  L  T  C  I  L  L  Y  N  L  Q   : D  H  M  C  M  L  L  Q  R  T  V  T  M  G  R  L  I  Q  R :   I  V  L  G  L  Y  Y  W  Q  L  K  E  P  L  K  *  L  S  R :   Q  F  N  V  *  V  E  M  D  I  *  M  S  I  Q  Q  D  V  Y  C  E  M  P  K  C  M  R  L  Q  Q  E  L  V  K  *  E  E  L  *  L  V  V  S  Y  L  N  I  N  N  *  L  Q  I  K  I  N  *  G  I  L  H  D  L  I  S  L  K  K  K  L  Y  V  Q  S  T  N  Y  M  S  R  I :   *  K  Y  K  K  A  Q </second_frame>
            <third_frame>   K  S  I  E  N  A  *  I  I  C  S  K  V  L  E  F  Y  H  S  Q  K  L  Q  V  P  T  K  S  T  S  C  F  F  N  F  I  T  I  G  *  Y  S  K  T   : V  *  R  K  C  S  K  I  C  S  R  E  Y  S  S  L  C  *  K  D  *  *  N  K  Q  F  P  K   : G  D  *  L  V  E  I  D  G  R  L  *  F  T  W  N  Y  S  T  R :   G  I  W  W  S  Q  P  W  I  F  I  S  L  H  C  L  R  R  N  *  S  C  I  W  C  C  C  C  F  L  W  C  S  I  Q  R  L  H  *  P  I   : G  *  K  W  N  P  *  A  E  T  K  I  F  A  K   : A  Y  K  W  G  S  H  W  G  S  S  H  E  *  T  K  C :   W  V  R  C  C  *  H  E  V  S  S  R  S  C  R  W  W  L  C  F  K  W  K  *  N  V  V  H  Q  W  S  Y  R  *  Y  F   : D  C  L  C  K  N  G  Y  Y  C  W  F  *  R  N  Y  S  I  Y  N  R  K  R  N  V  R  :  I  L  N  C  T  K  I  G  Q  T  W  D  E  R  K  R  Y  :  V  *  T  C  I  R  E  L  L  C  S  *  G  K  C  F  R  P  R  R  K  R :   S  V  C  F  N  V  G  A  R  F  G  T  T  Y  F  S  S  R  T  Y  W  N  N  A  S  M  Y  G  Y  C  Y  S  L  R  S  T  K  G  A  I  W  K  T  N  R  R  I  S  T  Y  T   : G  K  T  S  *  H  V  Y  C  F  T  I  F  K  :  I  I  C  V  C  C  C  K  G  L  *  Q  W  E  D  *  S  K   : G  L  F  W  D  Y  T  T  G  S  *  K  S  H  S  S  S  S  P   : G  N  S  M  S  R  W  K  W  I  Y  K  *  V  S  N  R  T  F  T  A  R  C  Q  N  V  *  D  C  S  R  N  *  *  N  K  K  N  Y  N  W  S  *  A  I  *  T  S  I  I  S  Y  K  L  K  L  I  R  G  S  Y  M  I  *  F  L  *  K  K  N  C  M  F  N  Q  Q  I  I  C  H  V   : Y  E  S  T  K  R  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85518" stop="85652"/>
                    <exon start="85799" stop="85882"/>
                    <exon start="85989" stop="86046"/>
                    <exon start="87178" stop="87302"/>
                    <exon start="87423" stop="87467"/>
                    <exon start="87591" stop="87639"/>
                    <exon start="87773" stop="87882"/>
                    <exon start="88116" stop="88192"/>
                    <exon start="88312" stop="88362"/>
                    <exon start="88498" stop="88562"/>
                    <exon start="88643" stop="88797"/>
                    <exon start="88884" stop="88924"/>
                    <exon start="89013" stop="89067"/>
                    <exon start="89155" stop="89211"/>
                    <exon start="89307" stop="89453"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1251</number_coding_nucleotides>
                  <number_encoded_amino_acids>417</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KNPLKMHKLFAVRSLSSTIAKNFKSLQNQQAAFSTSLLLDDTQKQFKESVAKFAQENIAPYAEKIDRTNSFPKEINLWKLMGDFNLHGITAPEEYGGLNLGYLYHCIALEEISRASGAVAVSYGVQSNVCINQLVRNGTPEQKQKYLPKLISGDHIGALAMSEPNAGSDVVSMKCRADRVDGGYVLNGNKMWCTNGPIANTLIVYAKTDTTAGSKGITAFIIEKEMSGFSTAQKLDKLGMRGSDTCELVFENCFVPKENVLGHEGKGVYVLMSGLDLERLILAAGPIGIMQACMDIVIPYVQQREQFGRPIGEFQLIQGKLADMYTALQSSRSYVYAVAKDCDNGKIDPKDCSGTILLAAERATQVALQAIQCLGGNGYINEYPTGRLLRDAKMYEIAAGTSEIRRIIIGRELFKHQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="102268" PGL_stop="90003"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="102268" e_stop="101852"/>
            <exon e_start="100695" e_stop="100155"/>
            <exon e_start="99868" e_stop="99706"/>
            <exon e_start="99323" e_stop="99233"/>
            <exon e_start="98971" e_stop="98900"/>
            <exon e_start="98328" e_stop="97895"/>
            <exon e_start="97073" e_stop="97004"/>
            <exon e_start="94006" e_stop="93902"/>
            <exon e_start="93824" e_stop="93484"/>
            <exon e_start="93303" e_stop="93160"/>
            <exon e_start="92996" e_stop="92933"/>
            <exon e_start="92113" e_stop="91968"/>
            <exon e_start="91772" e_stop="91668"/>
            <exon e_start="90473" e_stop="90003"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.999" e_score="0.998"/>
          <exon-intron don_prob="0.980" acc_prob="0.999" e_score="0.975"/>
          <exon-intron don_prob="0.980" acc_prob="0.980" e_score="0.923"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.955" e_score="0.956"/>
          <exon-intron don_prob="0.992" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.966" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.922" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.965" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.906" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="102268" e_stop="101852" e_length="417"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="101851" i_stop="100696" i_length="1156"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="100695" e_stop="100155" e_length="541"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.999">
            <gDNA_intron_boundary i_start="100154" i_stop="99869" i_length="286"/>
          </intron>
          <exon e_serial="3" e_score="0.975">
            <gDNA_exon_boundary e_start="99868" e_stop="99706" e_length="163"/>
          </exon>
          <intron i_serial="3" don_prob="0.980" acc_prob="0.999">
            <gDNA_intron_boundary i_start="99705" i_stop="99324" i_length="382"/>
          </intron>
          <exon e_serial="4" e_score="0.923">
            <gDNA_exon_boundary e_start="99323" e_stop="99233" e_length="91"/>
          </exon>
          <intron i_serial="4" don_prob="0.980" acc_prob="0.980">
            <gDNA_intron_boundary i_start="99232" i_stop="98972" i_length="261"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="98971" e_stop="98900" e_length="72"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="98899" i_stop="98329" i_length="571"/>
          </intron>
          <exon e_serial="6" e_score="0.956">
            <gDNA_exon_boundary e_start="98328" e_stop="97895" e_length="434"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.955">
            <gDNA_intron_boundary i_start="97894" i_stop="97074" i_length="821"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="97073" e_stop="97004" e_length="70"/>
          </exon>
          <intron i_serial="7" don_prob="0.992" acc_prob="0.985">
            <gDNA_intron_boundary i_start="97003" i_stop="94007" i_length="2997"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="94006" e_stop="93902" e_length="105"/>
          </exon>
          <intron i_serial="8" don_prob="0.996" acc_prob="0.982">
            <gDNA_intron_boundary i_start="93901" i_stop="93825" i_length="77"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="93824" e_stop="93484" e_length="341"/>
          </exon>
          <intron i_serial="9" don_prob="0.966" acc_prob="0.976">
            <gDNA_intron_boundary i_start="93483" i_stop="93304" i_length="180"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="93303" e_stop="93160" e_length="144"/>
          </exon>
          <intron i_serial="10" don_prob="0.922" acc_prob="0.983">
            <gDNA_intron_boundary i_start="93159" i_stop="92997" i_length="163"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="92996" e_stop="92933" e_length="64"/>
          </exon>
          <intron i_serial="11" don_prob="0.965" acc_prob="0.993">
            <gDNA_intron_boundary i_start="92932" i_stop="92114" i_length="819"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="92113" e_stop="91968" e_length="146"/>
          </exon>
          <intron i_serial="12" don_prob="0.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="91967" i_stop="91773" i_length="195"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="91772" e_stop="91668" e_length="105"/>
          </exon>
          <intron i_serial="13" don_prob="0.983" acc_prob="0.906">
            <gDNA_intron_boundary i_start="91667" i_stop="90474" i_length="1194"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="90473" e_stop="90003" e_length="471"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102268" stop="101852"/>
              <exon start="100695" stop="100396"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E737672" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102266" stop="101852"/>
              <exon start="100695" stop="100475"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E739003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102250" stop="101950"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313021" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102184" stop="101852"/>
              <exon start="100695" stop="100210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738284" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101931" stop="101852"/>
              <exon start="100695" stop="100226"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326684" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100422" stop="100155"/>
              <exon start="99868" stop="99706"/>
              <exon start="99323" stop="99233"/>
              <exon start="98971" stop="98900"/>
              <exon start="98328" stop="98271"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448439" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100422" stop="100155"/>
              <exon start="99868" stop="99706"/>
              <exon start="99323" stop="99233"/>
              <exon start="98971" stop="98927"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E422470" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99312" stop="99233"/>
              <exon start="98971" stop="98900"/>
              <exon start="98328" stop="97895"/>
              <exon start="97073" stop="97004"/>
              <exon start="94006" stop="93982"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E584679" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98223" stop="97895"/>
              <exon start="97073" stop="97004"/>
              <exon start="94006" stop="93902"/>
              <exon start="93824" stop="93771"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698627" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97972" stop="97895"/>
              <exon start="97073" stop="97004"/>
              <exon start="94006" stop="93902"/>
              <exon start="93824" stop="93484"/>
              <exon start="93303" stop="93160"/>
              <exon start="92996" stop="92949"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730173" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97062" stop="97004"/>
              <exon start="94006" stop="93902"/>
              <exon start="93824" stop="93484"/>
              <exon start="93303" stop="93240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558459" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93699" stop="93484"/>
              <exon start="93303" stop="93160"/>
              <exon start="92996" stop="92933"/>
              <exon start="92113" stop="91968"/>
              <exon start="91772" stop="91668"/>
              <exon start="90473" stop="90259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701798" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93640" stop="93484"/>
              <exon start="93303" stop="93160"/>
              <exon start="92996" stop="92933"/>
              <exon start="92113" stop="91968"/>
              <exon start="91772" stop="91668"/>
              <exon start="90473" stop="90357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560688" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91994" stop="91968"/>
              <exon start="91772" stop="91668"/>
              <exon start="90473" stop="90003"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349885" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTCAATATTTTGTCTCTTTGTCTGAAACACTCATCAACCCTAGTAGTATCTCTCTCTCAGCCACCACACACCACTGTAAACCTCCGCCGTTTTCGCCTTTTCTTCATCGGAGTATCACTAATTTGAATTTATATATTTATATATAGAAGTTGCTGACTATGGCGGAAAATGAGAGTACTGGAGATGATCAGAAGGAGGTGATTGAGCCTCCAAAGTCGCCGTGGAAGACTCCGGCGCCGGCGCCGGTGCCGGCGGATAAGGGTTCTGCGTCGTCAGGGGATGATGATTCTGATTCCTGGCCGGCACTTGCTGATGCTCAGCAGATGATTAAGTCTGGTGATTCTAGTTCCGCCGCTAAGTTGCCGTCACTTCCGCCGCAGCAGGAGATTGGCAGCCGCAATGTTGCTTCTGACAAG : GTCCGAGGTGAGCAGCTAAAGTTCCATGGGTCTTCTAGTGCCAAATCTTCAAATAAGTCATCATCCGCAGTTCAACAAAGACCAGTGCATAGGCACAACCAAAATGGTGTGCCATCATTTCCTGTGCCCTTGGCTTACCACCAATCAGGATTCCCTCCTTTTTATCAAAGTATGGTACCTATGCCACATATTCCTCTTCCAGGGTATGCATACCAGCCCCCTCGAGGGTCTTTCTCAGGAGCTGAAGGTCACGTGGCTAGGTCTGATGGTGATGCTGCATCTCAAGCTTTTGTACCCCCTATAAATGGTGGGTTTCGCCCCCCATCACGAGGGGATCCAAATGACCATGATGCCAAATTCTACAGAGGAAGACCTAATACACAAGAGCGAGGTAGCCAGTTTAGTTCAAGCTTGTCTAATCAGCGATCTGTGGGTTCTAAAGATGACATTCAGCTGCAACAAAGTATGGGGCTAAGGCCTTTCCTAAGGCCTCCATATTTTGGTCCAGCCCCGGGCTACATGGATGGTGCAAATTTTCCTG : GTCATCCAGGAGCTATATATTTTCTTCCTTCTCCCACTCCTGTGAGAGTTCCTTACCCACCTTTCTTTGTCCCACATTCTGTTAGCTCTGGAGCCTCTACTCCACCATCACCTGCATTAGCTTTGAGAGAGAGCATATTGAAGCAAATTGAATACTATTTCAG : TGATCAGAATTTGCAGAATGATCGCTTCTTGCTTACCTTAATGGACGATCAAGGTTGGGTTCCAATCTCTAGTATCGCTGAGTTCAAAAGG : GTTAAAAAAATGAGTACAGATATAGCATTTATCATTGATGCATTGCAGGCTTCAAGCACTGTTGAAGTAAAG : GGAGACAAGTTGAGAAGACGTGATGAATGGTCAAAGTGGGTTTCAGCTAGTGCTGATCAGAAATCATCCCCTTTGACCCCGGTGGAACACTCAGTGGGGAAGGTTATAAAGAAGGATGAGGTCAATGAAAATAAAGAGGATGGATTTCAAGTCAGATTTTCCCAAGAAAATCGTGTAGGTGAGCTTGCATCATTAGAGAAACATGCTAAAAAAGTGTCAGTGTTTAGTAAAGCAGAAACCAGTAGGAAGAAATCTGGATTCCGTGGTCCAACTCACAGAGTTGACAAAGGAAGTGGTGATGCAAGAATGGTTATGGCATCAAATGTTGTAGAAGAGAATGTAGACGACTTATCTAATGATTTCTCGAGCACATTTATGCTTGATGAAGAGATGGAGCTTGAAAATAAAAAGGACCAGTCCTCTTTGAGTGGAAG : AGTTGAGGAAGAAGATGACGAGATGTACGTTAATGACGAGGCTATTGAGAAACTTGTCATTGTAACTCGG : AACACTCGGGCATCTCAGGTATCTGGAACTGTTGGAAAAGAATCAAAACCAATATCTACTGAGCTTGCTTCTGCAATAAATGATGGTCTCTACTTCTATGAGCAG : GAGCTTAAAGCTACACGATCCAGTCATAGATCTAACAACTCCAATAATGATCCTAGAGATGACATTAGTAGGTCTTTTGGTACTGGTGCTGCTTTATCCAAATCAAAGTATGCCGATCATTCTTCTGGAGGAAAAAACACTGAAGGTCCTGGAAGTTCCAACTCCCGGAGAAAGCAAAACAAAGGATTTGCTAAGCCACATCCAATACATAAGCAGCGGCTGTTTTCTGGAAATTACCGGAATCATGGGGTTTCTCGGAACAGTGTAGGAGCAATATCTGAAAGTCCACCTAGCGATTCAGTTGGGTTTTTCTTTGGTTCTACACCTCCTGACAGTCATGT : GTCTAGGCCTTCAAAGTTGAGTGCCTCTCCGCACAGCAATCTTGCTAGTAATAGTCCGCCAGTTGGTTCCATGCCTAAACCATTTCCACCCTTCCAGCATCCAAGTCACAAGCTGCTACAAGAAAATGGTTTTACACAGCAGCT : GTACAAGAAGTATCATAAGCGCTGTCTGACTGATCGCAAGAAACTTGGAATTGGTTGCAGTGAG : GAAATGAATACACTGTACAGGTTTTGGTCGTATTTTCTGCGGAACATGTTCATACGTTCTATGTACAATGAGTTCCAAAAGATGGCTCAAGAAGATGCAGCTGCTAATTATAACTATGGGATGGAGTGCCTATTTAGATTTTATAG : TTACGGTTTGGAAAAGGAATTTAGAGAGGACCTTTATGACGACTTTGAGAGATTGACGCTTGACACCTACAATAGGGGAAACCTTTACGGCCTTGAGAAGTACTG : GGCCTTTCACCATTTCCGTCAGCAACGAGGTCAGAGAGCACCTTTGAAGAAGCTTCCAGAACTGGATAGACTACTCAGAGAAGAGTTCCGAAATTTGGATGACTTTAAACATGCCAGAGGAGGTGCCAGTGCAAGCACAAAGGAGGACGGTCACTAACCAACAGTGTGATTCTCAGCTTCATTGAACCGTCTGTCAGCGAATTTTGATGCCTTACAGTCCATACAATGAGCTCAAGTTGCCGAATTAGCTTTCTGAGATGATCAAGGCAAAAATTTTGTATATAGAGCTTCTGTGAGGTTGGTTAATTTTTACCTCCGAGGTTGAGCTAAAATTTTACCATGAGGGGATGCAACCTTGTGCCTTTTTGTACTTTCATCTTAGGATTATAAGGTGTACATATAGGAGGAAGTTGAAAACAAAATAAAAATGAAAAAAAAAAATAAAAAAATGTAAAACTACCAAAAAAAAAA</gDNA_template>
            <first_frame> I  Q  Y  F  V  S  L  S  E  T  L  I  N  P  S  S  I  S  L  S  A  T  T  H  H  C  K  P  P  P  F  S  P  F  L  H  R  S  I  T  N  L  N  L  Y  I  Y  I  *  K  L  L  T  M  A  E  N  E  S  T  G  D  D  Q  K  E  V  I  E  P  P  K  S  P  W  K  T  P  A  P  A  P  V  P  A  D  K  G  S  A  S  S  G  D  D  D  S  D  S  W  P  A  L  A  D  A  Q  Q  M  I  K  S  G  D  S  S  S  A  A  K  L  P  S  L  P  P  Q  Q  E  I  G  S  R  N  V  A  S  D  K  :  V  R  G  E  Q  L  K  F  H  G  S  S  S  A  K  S  S  N  K  S  S  S  A  V  Q  Q  R  P  V  H  R  H  N  Q  N  G  V  P  S  F  P  V  P  L  A  Y  H  Q  S  G  F  P  P  F  Y  Q  S  M  V  P  M  P  H  I  P  L  P  G  Y  A  Y  Q  P  P  R  G  S  F  S  G  A  E  G  H  V  A  R  S  D  G  D  A  A  S  Q  A  F  V  P  P  I  N  G  G  F  R  P  P  S  R  G  D  P  N  D  H  D  A  K  F  Y  R  G  R  P  N  T  Q  E  R  G  S  Q  F  S  S  S  L  S  N  Q  R  S  V  G  S  K  D  D  I  Q  L  Q  Q  S  M  G  L  R  P  F  L  R  P  P  Y  F  G  P  A  P  G  Y  M  D  G  A  N  F  P   : G  H  P  G  A  I  Y  F  L  P  S  P  T  P  V  R  V  P  Y  P  P  F  F  V  P  H  S  V  S  S  G  A  S  T  P  P  S  P  A  L  A  L  R  E  S  I  L  K  Q  I  E  Y  Y  F  S :   D  Q  N  L  Q  N  D  R  F  L  L  T  L  M  D  D  Q  G  W  V  P  I  S  S  I  A  E  F  K  R  :  V  K  K  M  S  T  D  I  A  F  I  I  D  A  L  Q  A  S  S  T  V  E  V  K  :  G  D  K  L  R  R  R  D  E  W  S  K  W  V  S  A  S  A  D  Q  K  S  S  P  L  T  P  V  E  H  S  V  G  K  V  I  K  K  D  E  V  N  E  N  K  E  D  G  F  Q  V  R  F  S  Q  E  N  R  V  G  E  L  A  S  L  E  K  H  A  K  K  V  S  V  F  S  K  A  E  T  S  R  K  K  S  G  F  R  G  P  T  H  R  V  D  K  G  S  G  D  A  R  M  V  M  A  S  N  V  V  E  E  N  V  D  D  L  S  N  D  F  S  S  T  F  M  L  D  E  E  M  E  L  E  N  K  K  D  Q  S  S  L  S  G  R :   V  E  E  E  D  D  E  M  Y  V  N  D  E  A  I  E  K  L  V  I  V  T  R  :  N  T  R  A  S  Q  V  S  G  T  V  G  K  E  S  K  P  I  S  T  E  L  A  S  A  I  N  D  G  L  Y  F  Y  E  Q  :  E  L  K  A  T  R  S  S  H  R  S  N  N  S  N  N  D  P  R  D  D  I  S  R  S  F  G  T  G  A  A  L  S  K  S  K  Y  A  D  H  S  S  G  G  K  N  T  E  G  P  G  S  S  N  S  R  R  K  Q  N  K  G  F  A  K  P  H  P  I  H  K  Q  R  L  F  S  G  N  Y  R  N  H  G  V  S  R  N  S  V  G  A  I  S  E  S  P  P  S  D  S  V  G  F  F  F  G  S  T  P  P  D  S  H  V :   S  R  P  S  K  L  S  A  S  P  H  S  N  L  A  S  N  S  P  P  V  G  S  M  P  K  P  F  P  P  F  Q  H  P  S  H  K  L  L  Q  E  N  G  F  T  Q  Q  L :   Y  K  K  Y  H  K  R  C  L  T  D  R  K  K  L  G  I  G  C  S  E  :  E  M  N  T  L  Y  R  F  W  S  Y  F  L  R  N  M  F  I  R  S  M  Y  N  E  F  Q  K  M  A  Q  E  D  A  A  A  N  Y  N  Y  G  M  E  C  L  F  R  F  Y  S :   Y  G  L  E  K  E  F  R  E  D  L  Y  D  D  F  E  R  L  T  L  D  T  Y  N  R  G  N  L  Y  G  L  E  K  Y  W :   A  F  H  H  F  R  Q  Q  R  G  Q  R  A  P  L  K  K  L  P  E  L  D  R  L  L  R  E  E  F  R  N  L  D  D  F  K  H  A  R  G  G  A  S  A  S  T  K  E  D  G  H  *  P  T  V  *  F  S  A  S  L  N  R  L  S  A  N  F  D  A  L  Q  S  I  Q  *  A  Q  V  A  E  L  A  F  *  D  D  Q  G  K  N  F  V  Y  R  A  S  V  R  L  V  N  F  Y  L  R  G  *  A  K  I  L  P  *  G  D  A  T  L  C  L  F  V  L  S  S  *  D  Y  K  V  Y  I  *  E  E  V  E  N  K  I  K  M  K  K  K  N  K  K  M  *  N  Y  Q  K  K   </first_frame>
            <second_frame>  F  N  I  L  S  L  C  L  K  H  S  S  T  L  V  V  S  L  S  Q  P  P  H  T  T  V  N  L  R  R  F  R  L  F  F  I  G  V  S  L  I  *  I  Y  I  F  I  Y  R  S  C  *  L  W  R  K  M  R  V  L  E  M  I  R  R  R  *  L  S  L  Q  S  R  R  G  R  L  R  R  R  R  R  C  R  R  I  R  V  L  R  R  Q  G  M  M  I  L  I  P  G  R  H  L  L  M  L  S  R  *  L  S  L  V  I  L  V  P  P  L  S  C  R  H  F  R  R  S  R  R  L  A  A  A  M  L  L  L  T  R :   S  E  V  S  S  *  S  S  M  G  L  L  V  P  N  L  Q  I  S  H  H  P  Q  F  N  K  D  Q  C  I  G  T  T  K  M  V  C  H  H  F  L  C  P  W  L  T  T  N  Q  D  S  L  L  F  I  K  V  W  Y  L  C  H  I  F  L  F  Q  G  M  H  T  S  P  L  E  G  L  S  Q  E  L  K  V  T  W  L  G  L  M  V  M  L  H  L  K  L  L  Y  P  L  *  M  V  G  F  A  P  H  H  E  G  I  Q  M  T  M  M  P  N  S  T  E  E  D  L  I  H  K  S  E  V  A  S  L  V  Q  A  C  L  I  S  D  L  W  V  L  K  M  T  F  S  C  N  K  V  W  G  *  G  L  S  *  G  L  H  I  L  V  Q  P  R  A  T  W  M  V  Q  I  F  L  :  V  I  Q  E  L  Y  I  F  F  L  L  P  L  L  *  E  F  L  T  H  L  S  L  S  H  I  L  L  A  L  E  P  L  L  H  H  H  L  H  *  L  *  E  R  A  Y  *  S  K  L  N  T  I  S   : V  I  R  I  C  R  M  I  A  S  C  L  P  *  W  T  I  K  V  G  F  Q  S  L  V  S  L  S  S  K  G :   L  K  K  *  V  Q  I  *  H  L  S  L  M  H  C  R  L  Q  A  L  L  K  *  R :   E  T  S  *  E  D  V  M  N  G  Q  S  G  F  Q  L  V  L  I  R  N  H  P  L  *  P  R  W  N  T  Q  W  G  R  L  *  R  R  M  R  S  M  K  I  K  R  M  D  F  K  S  D  F  P  K  K  I  V  *  V  S  L  H  H  *  R  N  M  L  K  K  C  Q  C  L  V  K  Q  K  P  V  G  R  N  L  D  S  V  V  Q  L  T  E  L  T  K  E  V  V  M  Q  E  W  L  W  H  Q  M  L  *  K  R  M  *  T  T  Y  L  M  I  S  R  A  H  L  C  L  M  K  R  W  S  L  K  I  K  R  T  S  P  L  *  V  E   : E  L  R  K  K  M  T  R  C  T  L  M  T  R  L  L  R  N  L  S  L  *  L  G :   T  L  G  H  L  R  Y  L  E  L  L  E  K  N  Q  N  Q  Y  L  L  S  L  L  L  Q  *  M  M  V  S  T  S  M  S  R :   S  L  K  L  H  D  P  V  I  D  L  T  T  P  I  M  I  L  E  M  T  L  V  G  L  L  V  L  V  L  L  Y  P  N  Q  S  M  P  I  I  L  L  E  E  K  T  L  K  V  L  E  V  P  T  P  G  E  S  K  T  K  D  L  L  S  H  I  Q  Y  I  S  S  G  C  F  L  E  I  T  G  I  M  G  F  L  G  T  V  *  E  Q  Y  L  K  V  H  L  A  I  Q  L  G  F  S  L  V  L  H  L  L  T  V  M   : C  L  G  L  Q  S  *  V  P  L  R  T  A  I  L  L  V  I  V  R  Q  L  V  P  C  L  N  H  F  H  P  S  S  I  Q  V  T  S  C  Y  K  K  M  V  L  H  S  S   : C  T  R  S  I  I  S  A  V  *  L  I  A  R  N  L  E  L  V  A  V  R :   K  *  I  H  C  T  G  F  G  R  I  F  C  G  T  C  S  Y  V  L  C  T  M  S  S  K  R  W  L  K  K  M  Q  L  L  I  I  T  M  G  W  S  A  Y  L  D  F  I   : V  T  V  W  K  R  N  L  E  R  T  F  M  T  T  L  R  D  *  R  L  T  P  T  I  G  E  T  F  T  A  L  R  S  T   : G  P  F  T  I  S  V  S  N  E  V  R  E  H  L  *  R  S  F  Q  N  W  I  D  Y  S  E  K  S  S  E  I  W  M  T  L  N  M  P  E  E  V  P  V  Q  A  Q  R  R  T  V  T  N  Q  Q  C  D  S  Q  L  H  *  T  V  C  Q  R  I  L  M  P  Y  S  P  Y  N  E  L  K  L  P  N  *  L  S  E  M  I  K  A  K  I  L  Y  I  E  L  L  *  G  W  L  I  F  T  S  E  V  E  L  K  F  Y  H  E  G  M  Q  P  C  A  F  L  Y  F  H  L  R  I  I  R  C  T  Y  R  R  K  L  K  T  K  *  K  *  K  K  K  I  K  K  C  K  T  T  K  K  K  </second_frame>
            <third_frame>   S  I  F  C  L  F  V  *  N  T  H  Q  P  *  *  Y  L  S  L  S  H  H  T  P  L  *  T  S  A  V  F  A  F  S  S  S  E  Y  H  *  F  E  F  I  Y  L  Y  I  E  V  A  D  Y  G  G  K  *  E  Y  W  R  *  S  E  G  G  D  *  A  S  K  V  A  V  E  D  S  G  A  G  A  G  A  G  G  *  G  F  C  V  V  R  G  *  *  F  *  F  L  A  G  T  C  *  C  S  A  D  D  *  V  W  *  F  *  F  R  R  *  V  A  V  T  S  A  A  A  G  D  W  Q  P  Q  C  C  F  *  Q   : G  P  R  *  A  A  K  V  P  W  V  F  *  C  Q  I  F  K  *  V  I  I  R  S  S  T  K  T  S  A  *  A  Q  P  K  W  C  A  I  I  S  C  A  L  G  L  P  P  I  R  I  P  S  F  L  S  K  Y  G  T  Y  A  T  Y  S  S  S  R  V  C  I  P  A  P  S  R  V  F  L  R  S  *  R  S  R  G  *  V  *  W  *  C  C  I  S  S  F  C  T  P  Y  K  W  W  V  S  P  P  I  T  R  G  S  K  *  P  *  C  Q  I  L  Q  R  K  T  *  Y  T  R  A  R  *  P  V  *  F  K  L  V  *  S  A  I  C  G  F  *  R  *  H  S  A  A  T  K  Y  G  A  K  A  F  P  K  A  S  I  F  W  S  S  P  G  L  H  G  W  C  K  F  S  W :   S  S  R  S  Y  I  F  S  S  F  S  H  S  C  E  S  S  L  P  T  F  L  C  P  T  F  C  *  L  W  S  L  Y  S  T  I  T  C  I  S  F  E  R  E  H  I  E  A  N  *  I  L  F  Q  :  *  S  E  F  A  E  *  S  L  L  A  Y  L  N  G  R  S  R  L  G  S  N  L  *  Y  R  *  V  Q  K   : G  *  K  N  E  Y  R  Y  S  I  Y  H  *  C  I  A  G  F  K  H  C  *  S  K   : G  R  Q  V  E  K  T  *  *  M  V  K  V  G  F  S  *  C  *  S  E  I  I  P  F  D  P  G  G  T  L  S  G  E  G  Y  K  E  G  *  G  Q  *  K  *  R  G  W  I  S  S  Q  I  F  P  R  K  S  C  R  *  A  C  I  I  R  E  T  C  *  K  S  V  S  V  *  *  S  R  N  Q  *  E  E  I  W  I  P  W  S  N  S  Q  S  *  Q  R  K  W  *  C  K  N  G  Y  G  I  K  C  C  R  R  E  C  R  R  L  I  *  *  F  L  E  H  I  Y  A  *  *  R  D  G  A  *  K  *  K  G  P  V  L  F  E  W  K  :  S  *  G  R  R  *  R  D  V  R  *  *  R  G  Y  *  E  T  C  H  C  N  S   : E  H  S  G  I  S  G  I  W  N  C  W  K  R  I  K  T  N  I  Y  *  A  C  F  C  N  K  *  W  S  L  L  L  *  A   : G  A  *  S  Y  T  I  Q  S  *  I  *  Q  L  Q  *  *  S  *  R  *  H  *  *  V  F  W  Y  W  C  C  F  I  Q  I  K  V  C  R  S  F  F  W  R  K  K  H  *  R  S  W  K  F  Q  L  P  E  K  A  K  Q  R  I  C  *  A  T  S  N  T  *  A  A  A  V  F  W  K  L  P  E  S  W  G  F  S  E  Q  C  R  S  N  I  *  K  S  T  *  R  F  S  W  V  F  L  W  F  Y  T  S  *  Q  S  C  :  V  *  A  F  K  V  E  C  L  S  A  Q  Q  S  C  *  *  *  S  A  S  W  F  H  A  *  T  I  S  T  L  P  A  S  K  S  Q  A  A  T  R  K  W  F  Y  T  A  A  :  V  Q  E  V  S  *  A  L  S  D  *  S  Q  E  T  W  N  W  L  Q  *   : G  N  E  Y  T  V  Q  V  L  V  V  F  S  A  E  H  V  H  T  F  Y  V  Q  *  V  P  K  D  G  S  R  R  C  S  C  *  L  *  L  W  D  G  V  P  I  *  I  L  *  :  L  R  F  G  K  G  I  *  R  G  P  L  *  R  L  *  E  I  D  A  *  H  L  Q  *  G  K  P  L  R  P  *  E  V  L  :  G  L  S  P  F  P  S  A  T  R  S  E  S  T  F  E  E  A  S  R  T  G  *  T  T  Q  R  R  V  P  K  F  G  *  L  *  T  C  Q  R  R  C  Q  C  K  H  K  G  G  R  S  L  T  N  S  V  I  L  S  F  I  E  P  S  V  S  E  F  *  C  L  T  V  H  T  M  S  S  S  C  R  I  S  F  L  R  *  S  R  Q  K  F  C  I  *  S  F  C  E  V  G  *  F  L  P  P  R  L  S  *  N  F  T  M  R  G  C  N  L  V  P  F  C  T  F  I  L  G  L  *  G  V  H  I  G  G  S  *  K  Q  N  K  N  E  K  K  K  *  K  N  V  K  L  P  K  K  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102121" stop="101852"/>
                    <exon start="100695" stop="100155"/>
                    <exon start="99868" stop="99706"/>
                    <exon start="99323" stop="99233"/>
                    <exon start="98971" stop="98900"/>
                    <exon start="98328" stop="97895"/>
                    <exon start="97073" stop="97004"/>
                    <exon start="94006" stop="93902"/>
                    <exon start="93824" stop="93484"/>
                    <exon start="93303" stop="93160"/>
                    <exon start="92996" stop="92933"/>
                    <exon start="92113" stop="91968"/>
                    <exon start="91772" stop="91668"/>
                    <exon start="90473" stop="90317"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>2700</number_coding_nucleotides>
                  <number_encoded_amino_acids>900</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLLTMAENESTGDDQKEVIEPPKSPWKTPAPAPVPADKGSASSGDDDSDSWPALADAQQMIKSGDSSSAAKLPSLPPQQEIGSRNVASDKVRGEQLKFHGSSSAKSSNKSSSAVQQRPVHRHNQNGVPSFPVPLAYHQSGFPPFYQSMVPMPHIPLPGYAYQPPRGSFSGAEGHVARSDGDAASQAFVPPINGGFRPPSRGDPNDHDAKFYRGRPNTQERGSQFSSSLSNQRSVGSKDDIQLQQSMGLRPFLRPPYFGPAPGYMDGANFPGHPGAIYFLPSPTPVRVPYPPFFVPHSVSSGASTPPSPALALRESILKQIEYYFSDQNLQNDRFLLTLMDDQGWVPISSIAEFKRVKKMSTDIAFIIDALQASSTVEVKGDKLRRRDEWSKWVSASADQKSSPLTPVEHSVGKVIKKDEVNENKEDGFQVRFSQENRVGELASLEKHAKKVSVFSKAETSRKKSGFRGPTHRVDKGSGDARMVMASNVVEENVDDLSNDFSSTFMLDEEMELENKKDQSSLSGRVEEEDDEMYVNDEAIEKLVIVTRNTRASQVSGTVGKESKPISTELASAINDGLYFYEQELKATRSSHRSNNSNNDPRDDISRSFGTGAALSKSKYADHSSGGKNTEGPGSSNSRRKQNKGFAKPHPIHKQRLFSGNYRNHGVSRNSVGAISESPPSDSVGFFFGSTPPDSHVSRPSKLSASPHSNLASNSPPVGSMPKPFPPFQHPSHKLLQENGFTQQLYKKYHKRCLTDRKKLGIGCSEEMNTLYRFWSYFLRNMFIRSMYNEFQKMAQEDAAANYNYGMECLFRFYSYGLEKEFREDLYDDFERLTLDTYNRGNLYGLEKYWAFHHFRQQRGQRAPLKKLPELDRLLREEFRNLDDFKHARGGASASTKEDGH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="109346" PGL_stop="102880"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="109346" e_stop="109255"/>
            <exon e_start="109104" e_stop="108865"/>
            <exon e_start="108766" e_stop="108561"/>
            <exon e_start="108479" e_stop="108243"/>
            <exon e_start="108068" e_stop="107932"/>
            <exon e_start="107855" e_stop="107758"/>
            <exon e_start="107680" e_stop="107583"/>
            <exon e_start="107457" e_stop="107289"/>
            <exon e_start="107204" e_stop="107088"/>
            <exon e_start="107010" e_stop="106903"/>
            <exon e_start="106817" e_stop="106755"/>
            <exon e_start="106577" e_stop="106464"/>
            <exon e_start="106387" e_stop="106222"/>
            <exon e_start="106135" e_stop="106023"/>
            <exon e_start="105919" e_stop="105782"/>
            <exon e_start="105703" e_stop="105573"/>
            <exon e_start="105039" e_stop="104974"/>
            <exon e_start="104597" e_stop="104534"/>
            <exon e_start="104445" e_stop="104334"/>
            <exon e_start="104257" e_stop="104184"/>
            <exon e_start="104091" e_stop="103997"/>
            <exon e_start="103893" e_stop="103862"/>
            <exon e_start="103779" e_stop="103267"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.993" e_score="1.000"/>
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          <exon-intron don_prob="0.942" acc_prob="0.441" e_score="1.000"/>
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              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736393" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105681" stop="105573"/>
              <exon start="105039" stop="104974"/>
              <exon start="104597" stop="104534"/>
              <exon start="104445" stop="104334"/>
              <exon start="104257" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103712"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249831" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105672" stop="105573"/>
              <exon start="105039" stop="104974"/>
              <exon start="104597" stop="104534"/>
              <exon start="104445" stop="104334"/>
              <exon start="104257" stop="104184"/>
              <exon start="104091" stop="103999"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464803" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105617" stop="105573"/>
              <exon start="105039" stop="104974"/>
              <exon start="104597" stop="104534"/>
              <exon start="104445" stop="104334"/>
              <exon start="104257" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103477"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698675" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105024" stop="104974"/>
              <exon start="104597" stop="104534"/>
              <exon start="104445" stop="104334"/>
              <exon start="104257" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103481"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482980" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105024" stop="104974"/>
              <exon start="104597" stop="104534"/>
              <exon start="104445" stop="104334"/>
              <exon start="104257" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103640"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482914" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104578" stop="104534"/>
              <exon start="104445" stop="104334"/>
              <exon start="104257" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103298"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104429" stop="104334"/>
              <exon start="104257" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103306"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E696186" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104420" stop="104334"/>
              <exon start="104257" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E608098" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104412" stop="104334"/>
              <exon start="104257" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103353"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369981" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104412" stop="104334"/>
              <exon start="104257" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103509"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259504" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104412" stop="104334"/>
              <exon start="104257" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103509"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259622" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104412" stop="104334"/>
              <exon start="104257" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103557"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104242" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103413"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325381" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104189" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103267"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738581" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104050" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103417"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245512" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103889" stop="103862"/>
              <exon start="103779" stop="103451"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103886" stop="103862"/>
              <exon start="103779" stop="103311"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E593165" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG : AAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGT : GTTGCCTTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCG : GAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCATACCAATCTAAAACTTATAAGGTGGAGATTAGCTTTGCTGCCAAGATTCCAATGCAGGCGATTGCAAATGCTTTGCGAGGTCAAGAGTCTGAGAACTCTCAAGAAGCCTTGCGAGTTTTGGATATAATTTTAAGGCAGCATGCTGCAAAACA : GGGTTGTTTACTTGTTCGTCAATCCTTTTTCCATAATGATCCTAAGAACTTTGCTGATGTTGGCGGTGGTGTTCTGGGCTGCCGAGGGTTCCATTCAAGTTTTCGTACCACCCAGTCGGGATTGTCATTGAACATTG : ACGTGTCTACCACTATGATAATCCAACCTGGGCCTGTGGTCGACTTTCTGATAGCGAACCAAAATGCAAAAGATCCCTTTTCACTTGATTGGGCAAAG : GCAAAACGCGTGTTGAAGAACCTGCGAGTGAAGACTGCTCCCGCTAACCAAGAATTCAAAATAACTGGATTGAGCGAAAAACCTTGTCGTGAGCAGAT : GTTTACTCTAAAGCAGAAGAGCAAAGATGAGGATGGTGAAGTGCAAACTTCAGAAGTGACTGTTTATGATTACTTTGTTAATCATCGTAACATAGACTTGCGATATTCTGCCGATTTGCCGTGCCTCAATGTTGGAAAGCCTAAACGTCCTACCTATTTCCCCATTGAG : CTCTGCACTTTGGTCTCATTGCAAAGGTACACAAAAGCCTTGTCCACCTTTCAGAGGGCTTCCTTGGTGGAGAAGTCCAGGCAAAAGCCTCAGGAGAGAATGCAAATTTTGAGCAAT : GCTCTCAAAATCAACAATTATGATGCTGAGCCTCTGCTTCGTTCTTCTGGTGTCTCAATCAGTAGCAACTTCACCCAGGTTGACGGGCGCGTACTGCCTGCTCCTAAG : TTGAAGGCTGGAAATGGAGATGACCTTTTCACCCGGAATGGAAGGTGGAACTTTAATAATAAG : AGATTCTTTGAGCCAGCAAAGGTAGAGCGTTGGGCTGTTGTGAACTTTTCTGCACGCTGTGATGTCCGTGGTCTAGTCAGAGATTTGACAAGACTTGGAGAGACGAAGGGAATT : AGTGTGGAAGCTCCATTTGAAGTGTTTGAAGAGTCTCCACAGCTTAGAAGGGCTCCACCTGTTGTCAGAGTTGACAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGGTGCCCCCAAGTTTCTTCTCTGTCTTCTTCCTGAGAGGAAAAATTGTGACATATATG : GTCCATGGAAGCGAAAAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAG : CTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCA : GTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAG : GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAG : GGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAG : GCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAG : GGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATT : GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT : GTACCAAAGAAGCACTACTGCTATATCCATTG : TGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAACAACTTAGTTATGCGGTACAATACTAGGTCTGTTGCCATATTCAGGTCTCATGCATATTTTTCGCGCTTCTGTTCTCCTGAACAATTTTGCTATGTATCTGTAAAATGCATAGAGATTAACCTGGTGGTGTGACTATGCATCAATTATGCTTTTTTATATGTAAATGGTAATATATAACTTGTTTTTTTCCCGCTTTTATTAGGGAAGTTA</gDNA_template>
            <first_frame> F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  * :   R  L  W  *  W  L  K  K  R  M  V  D  P  Q  R  L  C  L  L  L  P  L  F  H  L  I  S  L  L  H  K  L  N  Q  S  Q  *  R  R  R  F  Y  V  F  P  W  Q  G  V  A  L  E  A  R  D  K  R  F  R  S  L  P  I  T  L  K  *  T  C  L  M  L  M  D  T  S  F  I  T  V :   L  P  Y  F  M  R  M  V  D  L  S  R  E  K  A  L  A  E  K  F  W  I  E  C  M  K  H  M  I  Q  N  W  L  G  R  I  L  H  M  M  G  R  R  V  C  S  P  S  V  H  Y  L  E  I  N  *  S  S  Q  L  Y  *  M  T  *  H  L  I   : G  T  T  V  P  M  A  T  L  A  L  A  D  M  E  A  L  L  M  K  L  I  G  K  D  *  G  G  H  T  N  L  K  L  I  R  W  R  L  A  L  L  P  R  F  Q  C  R  R  L  Q  M  L  C  E  V  K  S  L  R  T  L  K  K  P  C  E  F  W  I  *  F  *  G  S  M  L  Q  N   : R  V  V  Y  L  F  V  N  P  F  S  I  M  I  L  R  T  L  L  M  L  A  V  V  F  W  A  A  E  G  S  I  Q  V  F  V  P  P  S  R  D  C  H  *  T  L  :  T  C  L  P  L  *  *  S  N  L  G  L  W  S  T  F  *  *  R  T  K  M  Q  K  I  P  F  H  L  I  G  Q  R :   Q  N  A  C  *  R  T  C  E  *  R  L  L  P  L  T  K  N  S  K  *  L  D  *  A  K  N  L  V  V  S  R   : C  L  L  *  S  R  R  A  K  M  R  M  V  K  C  K  L  Q  K  *  L  F  M  I  T  L  L  I  I  V  T  *  T  C  D  I  L  P  I  C  R  A  S  M  L  E  S  L  N  V  L  P  I  S  P  L  S :   S  A  L  W  S  H  C  K  G  T  Q  K  P  C  P  P  F  R  G  L  P  W  W  R  S  P  G  K  S  L  R  R  E  C  K  F  *  A  M :   L  S  K  S  T  I  M  M  L  S  L  C  F  V  L  L  V  S  Q  S  V  A  T  S  P  R  L  T  G  A  Y  C  L  L  L  S :   *  R  L  E  M  E  M  T  F  S  P  G  M  E  G  G  T  L  I  I  R :   D  S  L  S  Q  Q  R  *  S  V  G  L  L  *  T  F  L  H  A  V  M  S  V  V  *  S  E  I  *  Q  D  L  E  R  R  R  E  L :   V  W  K  L  H  L  K  C  L  K  S  L  H  S  L  E  G  L  H  L  L  S  E  L  T  K  C  L  K  R  S  S  Q  N  F  L  V  P  P  S  F  F  S  V  F  F  L  R  G  K  I  V  T  Y  M  :  V  H  G  S  E  K  I  W  L  I  M  V  *  *  L  N  A  W  L  L  E  E  L  M  I  S  I  S  Q  T  F  S  L  R  S  M  L  S :   L  V  V  *  I  L  C  *  L  R  R  F  L  L  P  S  P  W  Y  L  R  S  P  P  *  F  L  E  W  T  Y  H  M  A  L  P  A  S  L  M  F  H  Q  L  L  Q :   L  *  V  Q  G  S  G  R  Q  Y  L  V  I  E  L  Q  C  A  L  N  L  L  K  W  R  *  L  I  T  Y  L  K  K  F  Q  T  L  M  M  M  G  L  *   : G  N  F  C  *  I  F  M  *  V  P  G  K  G  S  L  S  T  L  *  Y  S   : G  M  V  S  V  N  L  N  L  I  K  F  *  T  *  N  W  T  S  S  L  R :   P  A  I  F  *  M  R  S  G  R  P  S  L  L  S  L  L  L  R  K  I  I  I  Q  S  F  S  S  L  D  L  L  I  M  F  H  Q  :  G  Q  L  *  I  T  K  F  V  I  Q  G  T  M  T  S  I  C  A  P  M  L  E  *  L :   V  R  L  D  L  H  I  T  M  C  C  W  M  K  L  V  S  H  L  M  N  F  K  N  L  F  I  I  C  P  M   : C  T  K  E  A  L  L  L  Y  P  L  :  W  L  R  *  V  M  P  I  W  P  P  H  R  W  V  N  G  *  N  S  R  M  H  Q  R  H  R  Q  A  M  V  V  *  L  M  L  V  Q  L  L  F  L  N  C  P  V  F  R  R  T  L  L  A  P  C  S  S  V  E  A  C  A  P  P  P  V  L  L  Y  A  V  N  V  C  S  R  Q  M  V  S  V  N  S  S  S  L  T  A  L  G  V  R  T  L  S  *  *  P  P  K  N  N  L  V  M  R  Y  N  T  R  S  V  A  I  F  R  S  H  A  Y  F  S  R  F  C  S  P  E  Q  F  C  Y  V  S  V  K  C  I  E  I  N  L  V  V  *  L  C  I  N  Y  A  F  L  Y  V  N  G  N  I  *  L  V  F  F  P  L  L  L  G  K  L </first_frame>
            <second_frame>  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F   : E  D  C  G  N  G  *  R  R  E  W  W  I  H  R  G  S  A  S  S  S  P  C  S  T  *  F  L  S  C  T  S  *  T  R  A  S  E  E  E  G  F  T  C  S  H  G  K  A  W  P  W  K  Q  G  T  K  D  S  D  P  Y  Q  S  L  *  S  E  R  V  *  C  *  W  T  L  L  S  L  Q   : C  C  L  I  L  *  G  W  S  T  C  R  G  K  R  H  W  Q  K  S  S  G  *  S  A  *  N  I  *  Y  R  I  G  W  E  G  F  C  I  *  W  G  E  E  F  V  H  H  R  F  T  T  *  K  *  T  R  V  H  S  C  T  R  *  H  N  I  *  S  :  E  Q  R  Y  Q  W  Q  L  *  P  W  Q  T  W  K  P  S  *  *  N  *  *  E  K  I  K  A  A  I  P  I  *  N  L  *  G  G  D  *  L  C  C  Q  D  S  N  A  G  D  C  K  C  F  A  R  S  R  V  *  E  L  S  R  S  L  A  S  F  G  Y  N  F  K  A  A  C  C  K  T  :  G  L  F  T  C  S  S  I  L  F  P  *  *  S  *  E  L  C  *  C  W  R  W  C  S  G  L  P  R  V  P  F  K  F  S  Y  H  P  V  G  I  V  I  E  H  * :   R  V  Y  H  Y  D  N  P  T  W  A  C  G  R  L  S  D  S  E  P  K  C  K  R  S  L  F  T  *  L  G  K   : G  K  T  R  V  E  E  P  A  S  E  D  C  S  R  *  P  R  I  Q  N  N  W  I  E  R  K  T  L  S  *  A  D  :  V  Y  S  K  A  E  E  Q  R  *  G  W  *  S  A  N  F  R  S  D  C  L  *  L  L  C  *  S  S  *  H  R  L  A  I  F  C  R  F  A  V  P  Q  C  W  K  A  *  T  S  Y  L  F  P  H  *   : A  L  H  F  G  L  I  A  K  V  H  K  S  L  V  H  L  S  E  G  F  L  G  G  E  V  Q  A  K  A  S  G  E  N  A  N  F  E  Q   : C  S  Q  N  Q  Q  L  *  C  *  A  S  A  S  F  F  W  C  L  N  Q  *  Q  L  H  P  G  *  R  A  R  T  A  C  S  *   : V  E  G  W  K  W  R  *  P  F  H  P  E  W  K  V  E  L  *  *  *   : E  I  L  *  A  S  K  G  R  A  L  G  C  C  E  L  F  C  T  L  *  C  P  W  S  S  Q  R  F  D  K  T  W  R  D  E  G  N   : *  C  G  S  S  I  *  S  V  *  R  V  S  T  A  *  K  G  S  T  C  C  Q  S  *  Q  N  V  *  R  D  P  V  K  T  S  W  C  P  Q  V  S  S  L  S  S  S  *  E  E  K  L  *  H  I  W :   S  M  E  A  K  K  S  G  *  S  W  Y  S  N  S  M  L  G  S  W  K  S  *  *  S  V  S  H  K  P  S  P  *  D  Q  C  *   : A  W  W  F  K  F  Y  V  S  C  G  D  F  S  F  H  P  H  G  I  *  G  P  H  H  D  S  W  N  G  R  I  T  W  L  S  R  P  V  *  C  S  I  N  C  C   : S  C  E  F  K  A  V  A  V  N  I  S  L  *  S  F  S  A  H  S  I  S  *  S  G  D  D  *  *  H  I  *  K  S  F  R  H  *  *  *  W  D  Y  E  :  G  T  F  A  R  F  L  C  E  F  R  E  K  E  A  *  A  H  Y  S  I  Q  :  G  W  C  Q  *  I  S  I  *  S  S  S  K  H  R  T  G  P  A  H  *   : G  L  Q  F  S  R  *  E  V  V  A  Q  V  C  Y  H  C  C  S  E  K  S  S  Y  K  V  F  P  V  W  I  S  *  *  C  S  T  R :   D  N  Y  R  *  Q  S  L  S  S  K  E  Q  *  L  L  S  V  R  P  C  W  N  D   : W  Y  D  S  T  Y  T  L  P  C  V  V  G  *  S  W  F  L  T  *  *  T  S  R  T  C  S  *  S  V  L  C  :  V  P  K  K  H  Y  C  Y  I  H  C :   G  S  D  K  L  C  P  F  G  R  H  T  G  G  S  M  D  E  I  R  G  C  I  R  D  I  V  K  P  W  W  S  D  *  C  W  S  S  Y  C  S  S  I  A  P  S  S  G  E  R  C  *  L  H  V  L  L  L  R  P  V  H  H  L  L  F  Y  S  T  R  L  M  Y  A  L  D  K  W  F  L  *  I  A  L  V  *  Q  H  L  E  Y  E  P  C  P  S  D  L  P  K  T  T  *  L  C  G  T  I  L  G  L  L  P  Y  S  G  L  M  H  I  F  R  A  S  V  L  L  N  N  F  A  M  Y  L  *  N  A  *  R  L  T  W  W  C  D  Y  A  S  I  M  L  F  Y  M  *  M  V  I  Y  N  L  F  F  S  R  F  Y  *  G  S   </second_frame>
            <third_frame>   F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  L  :  K  I  V  V  M  A  E  E  E  N  G  G  S  T  E  A  L  P  P  P  P  P  V  P  L  N  F  S  P  A  Q  A  E  P  E  P  V  K  K  K  V  L  R  V  P  M  A  R  R  G  L  G  S  K  G  Q  K  I  P  I  L  T  N  H  F  K  V  N  V  S  N  V  D  G  H  F  F  H  Y  S  :  V  A  L  F  Y  E  D  G  R  P  V  E  G  K  G  I  G  R  K  V  L  D  R  V  H  E  T  Y  D  T  E  L  A  G  K  D  F  A  Y  D  G  E  K  S  L  F  T  I  G  S  L  P  R  N  K  L  E  F  T  V  V  L  D  D  I  T  S  N  R :   N  N  G  T  N  G  N  S  S  P  G  R  H  G  S  P  P  N  E  T  D  R  K  R  L  R  R  P  Y  Q  S  K  T  Y  K  V  E  I  S  F  A  A  K  I  P  M  Q  A  I  A  N  A  L  R  G  Q  E  S  E  N  S  Q  E  A  L  R  V  L  D  I  I  L  R  Q  H  A  A  K  Q :   G  C  L  L  V  R  Q  S  F  F  H  N  D  P  K  N  F  A  D  V  G  G  G  V  L  G  C  R  G  F  H  S  S  F  R  T  T  Q  S  G  L  S  L  N  I   : D  V  S  T  T  M  I  I  Q  P  G  P  V  V  D  F  L  I  A  N  Q  N  A  K  D  P  F  S  L  D  W  A  K  :  A  K  R  V  L  K  N  L  R  V  K  T  A  P  A  N  Q  E  F  K  I  T  G  L  S  E  K  P  C  R  E  Q  M :   F  T  L  K  Q  K  S  K  D  E  D  G  E  V  Q  T  S  E  V  T  V  Y  D  Y  F  V  N  H  R  N  I  D  L  R  Y  S  A  D  L  P  C  L  N  V  G  K  P  K  R  P  T  Y  F  P  I  E  :  L  C  T  L  V  S  L  Q  R  Y  T  K  A  L  S  T  F  Q  R  A  S  L  V  E  K  S  R  Q  K  P  Q  E  R  M  Q  I  L  S  N  :  A  L  K  I  N  N  Y  D  A  E  P  L  L  R  S  S  G  V  S  I  S  S  N  F  T  Q  V  D  G  R  V  L  P  A  P  K  :  L  K  A  G  N  G  D  D  L  F  T  R  N  G  R  W  N  F  N  N  K  :  R  F  F  E  P  A  K  V  E  R  W  A  V  V  N  F  S  A  R  C  D  V  R  G  L  V  R  D  L  T  R  L  G  E  T  K  G  I  :  S  V  E  A  P  F  E  V  F  E  E  S  P  Q  L  R  R  A  P  P  V  V  R  V  D  K  M  F  E  E  I  Q  S  K  L  P  G  A  P  K  F  L  L  C  L  L  P  E  R  K  N  C  D  I  Y   : G  P  W  K  R  K  N  L  A  D  H  G  I  V  T  Q  C  L  A  P  G  R  V  N  D  Q  Y  L  T  N  L  L  L  K  I  N  A  K  :  L  G  G  L  N  S  M  L  A  A  E  I  S  P  S  I  P  M  V  S  K  V  P  T  M  I  L  G  M  D  V  S  H  G  S  P  G  Q  S  D  V  P  S  I  A  A  :  V  V  S  S  R  Q  W  P  S  I  S  R  Y  R  A  S  V  R  T  Q  S  P  K  V  E  M  I  D  N  I  F  K  K  V  S  D  T  D  D  D  G  I  M  R :   E  L  L  L  D  F  Y  V  S  S  G  K  R  K  P  E  H  I  I  V  F  R :   D  G  V  S  E  S  Q  F  N  Q  V  L  N  I  E  L  D  Q  L  I  E  :  A  C  N  F  L  D  E  K  W  S  P  K  F  V  I  I  V  A  Q  K  N  H  H  T  K  F  F  Q  S  G  S  P  D  N  V  P  P   : G  T  I  I  D  N  K  V  C  H  P  R  N  N  D  F  Y  L  C  A  H  A  G  M  I  :  G  T  T  R  P  T  H  Y  H  V  L  L  D  E  V  G  F  S  P  D  E  L  Q  E  L  V  H  N  L  S  Y  V :   Y  Q  R  S  T  T  A  I  S  I   : V  A  P  I  S  Y  A  H  L  A  A  T  Q  V  G  Q  W  M  K  F  E  D  A  S  E  T  S  S  S  H  G  G  L  T  N  A  G  P  V  T  V  P  Q  L  P  R  L  Q  E  N  V  A  S  S  M  F  F  C  *  G  L  C  T  T  S  C  F  T  L  R  G  *  C  M  L  *  T  N  G  F  C  K  *  L  *  F  D  S  T  W  S  T  N  L  V  L  V  T  S  Q  K  Q  L  S  Y  A  V  Q  Y  *  V  C  C  H  I  Q  V  S  C  I  F  F  A  L  L  F  S  *  T  I  L  L  C  I  C  K  M  H  R  D  *  P  G  G  V  T  M  H  Q  L  C  F  F  I  C  K  W  *  Y  I  T  C  F  F  P  A  F  I  R  E  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="109344" stop="109255"/>
                    <exon start="109104" stop="108865"/>
                    <exon start="108766" stop="108561"/>
                    <exon start="108479" stop="108243"/>
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                  <frame>2</frame>
                  <number_coding_nucleotides>2841</number_coding_nucleotides>
                  <number_encoded_amino_acids>947</number_encoded_amino_acids>
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              <predicted_protein_sequence>FFFFFFFFFFFFFFFFFFFFFFFFFFFFFLKIVVMAEEENGGSTEALPPPPPVPLNFSPAQAEPEPVKKKVLRVPMARRGLGSKGQKIPILTNHFKVNVSNVDGHFFHYSVALFYEDGRPVEGKGIGRKVLDRVHETYDTELAGKDFAYDGEKSLFTIGSLPRNKLEFTVVLDDITSNRNNGTNGNSSPGRHGSPPNETDRKRLRRPYQSKTYKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNAKDPFSLDWAKAKRVLKNLRVKTAPANQEFKITGLSEKPCREQMFTLKQKSKDEDGEVQTSEVTVYDYFVNHRNIDLRYSADLPCLNVGKPKRPTYFPIELCTLVSLQRYTKALSTFQRASLVEKSRQKPQERMQILSNALKINNYDAEPLLRSSGVSISSNFTQVDGRVLPAPKLKAGNGDDLFTRNGRWNFNNKRFFEPAKVERWAVVNFSARCDVRGLVRDLTRLGETKGISVEAPFEVFEESPQLRRAPPVVRVDKMFEEIQSKLPGAPKFLLCLLPERKNCDIYGPWKRKNLADHGIVTQCLAPGRVNDQYLTNLLLKINAKLGGLNSMLAAEISPSIPMVSKVPTMILGMDVSHGSPGQSDVPSIAAVVSSRQWPSISRYRASVRTQSPKVEMIDNIFKKVSDTDDDGIMRELLLDFYVSSGKRKPEHIIVFRDGVSESQFNQVLNIELDQLIEACNFLDEKWSPKFVIIVAQKNHHTKFFQSGSPDNVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVGFSPDELQELVHNLSYVYQRSTTAISIVAPISYAHLAATQVGQWMKFEDASETSSSHGGLTNAGPVTVPQLPRLQENVASSMFFC*</predicted_protein_sequence>
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              <exon start="106135" stop="106023"/>
              <exon start="105919" stop="105782"/>
              <exon start="105703" stop="105573"/>
              <exon start="105039" stop="104974"/>
              <exon start="104597" stop="104534"/>
              <exon start="104445" stop="104428"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203033" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106241" stop="106222"/>
              <exon start="106135" stop="106023"/>
              <exon start="105919" stop="105808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278487" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106236" stop="106222"/>
              <exon start="106135" stop="106023"/>
              <exon start="105919" stop="105782"/>
              <exon start="105703" stop="105573"/>
              <exon start="105039" stop="104995"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472282" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106127" stop="106023"/>
              <exon start="105919" stop="105782"/>
              <exon start="105703" stop="105573"/>
              <exon start="105039" stop="104974"/>
              <exon start="104597" stop="104535"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246332" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105906" stop="105782"/>
              <exon start="105703" stop="105573"/>
              <exon start="105039" stop="104974"/>
              <exon start="104597" stop="104534"/>
              <exon start="104445" stop="104348"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577105" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104597" stop="104534"/>
              <exon start="104445" stop="104334"/>
              <exon start="104268" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103507"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356539" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104260" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103311"/>
              <exon start="102926" stop="102880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585150" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104242" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103413"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325381" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104050" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103417"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245512" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103889" stop="103862"/>
              <exon start="103779" stop="103451"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103886" stop="103862"/>
              <exon start="103779" stop="103311"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E593165" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG : AAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGT : GTTGCCTTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCG : GAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCATACCAATCTAAAACTTATAAGGTGGAGATTAGCTTTGCTGCCAAGATTCCAATGCAGGCGATTGCAAATGCTTTGCGAGGTCAAGAGTCTGAGAACTCTCAAGAAGCCTTGCGAGTTTTGGATATAATTTTAAGGCAGCATGCTGCAAAACA : GGGTTGTTTACTTGTTCGTCAATCCTTTTTCCATAATGATCCTAAGAACTTTGCTGATGTTGGCGGTGGTGTTCTGGGCTGCCGAGGGTTCCATTCAAGTTTTCGTACCACCCAGTCGGGATTGTCATTGAACATTG : ACGTGTCTACCACTATGATAATCCAACCTGGGCCTGTGGTCGACTTTCTGATAGCGAACCAAAATGCAAAAGATCCCTTTTCACTTGATTGGGCAAAG : GCAAAACGCGTGTTGAAGAACCTGCGAGTGAAGACTGCTCCCGCTAACCAAGAATTCAAAATAACTGGATTGAGCGAAAAACCTTGTCGTGAGCAGAT : GTTTACTCTAAAGCAGAAGAGCAAAGATGAGGATGGTGAAGTGCAAACTTCAGAAGTGACTGTTTATGATTACTTTGTTAATCATCGTAACATAGACTTGCGATATTCTGCCGATTTGCCGTGCCTCAATGTTGGAAAGCCTAAACGTCCTACCTATTTCCCCATTGAG : CTCTGCACTTTGGTCTCATTGCAAAGGTACACAAAAGCCTTGTCCACCTTTCAGAGGGCTTCCTTGGTGGAGAAGTCCAGGCAAAAGCCTCAGGAGAGAATGCAAATTTTGAGCAAT : GCTCTCAAAATCAACAATTATGATGCTGAGCCTCTGCTTCGTTCTTCTGGTGTCTCAATCAGTAGCAACTTCACCCAGGTTGACGGGCGCGTACTGCCTGCTCCTAAG : TTGAAGGCTGGAAATGGAGATGACCTTTTCACCCGGAATGGAAGGTGGAACTTTAATAATAAG : AGATTCTTTGAGCCAGCAAAGGTAGAGCGTTGGGCTGTTGTGAACTTTTCTGCACGCTGTGATGTCCGTGGTCTAGTCAGAGATTTGACAAGACTTGGAGAGACGAAGGGAATT : AGTGTGGAAGCTCCATTTGAAGTGTTTGAAGAGTCTCCACAGCTTAGAAGGGCTCCACCTGTTGTCAGAGTTGACAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGGTGCCCCCAAGTTTCTTCTCTGTCTTCTTCCTGAGAGGAAAAATTGTGACATATATG : GTCCATGGAAGCGAAAAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAG : CTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCA : GTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAG : GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAG : GGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAG : GCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAG : ATTTTTTGCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATT : GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT : GTACCAAAGAAGCACTACTGCTATATCCATTG : TGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAACAACTTAGTTATGCGGTACAATACTAGGTCTGTTGCCATATTCAGGTCTCATGCATATTTTTCGCGCTTCTGTTCTCCTGAACAATTTTGCTATGTATCTGTAAAATGCATAGAGATTAACCTGGTGGTGTGACTATGCATCAATTATGCTTTTTTATATGTAAATG : CTAAAATCAGGAATACCTATATTTTTTCAATCAAAATAAATCCATTC</gDNA_template>
            <first_frame> F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  * :   R  L  W  *  W  L  K  K  R  M  V  D  P  Q  R  L  C  L  L  L  P  L  F  H  L  I  S  L  L  H  K  L  N  Q  S  Q  *  R  R  R  F  Y  V  F  P  W  Q  G  V  A  L  E  A  R  D  K  R  F  R  S  L  P  I  T  L  K  *  T  C  L  M  L  M  D  T  S  F  I  T  V :   L  P  Y  F  M  R  M  V  D  L  S  R  E  K  A  L  A  E  K  F  W  I  E  C  M  K  H  M  I  Q  N  W  L  G  R  I  L  H  M  M  G  R  R  V  C  S  P  S  V  H  Y  L  E  I  N  *  S  S  Q  L  Y  *  M  T  *  H  L  I   : G  T  T  V  P  M  A  T  L  A  L  A  D  M  E  A  L  L  M  K  L  I  G  K  D  *  G  G  H  T  N  L  K  L  I  R  W  R  L  A  L  L  P  R  F  Q  C  R  R  L  Q  M  L  C  E  V  K  S  L  R  T  L  K  K  P  C  E  F  W  I  *  F  *  G  S  M  L  Q  N   : R  V  V  Y  L  F  V  N  P  F  S  I  M  I  L  R  T  L  L  M  L  A  V  V  F  W  A  A  E  G  S  I  Q  V  F  V  P  P  S  R  D  C  H  *  T  L  :  T  C  L  P  L  *  *  S  N  L  G  L  W  S  T  F  *  *  R  T  K  M  Q  K  I  P  F  H  L  I  G  Q  R :   Q  N  A  C  *  R  T  C  E  *  R  L  L  P  L  T  K  N  S  K  *  L  D  *  A  K  N  L  V  V  S  R   : C  L  L  *  S  R  R  A  K  M  R  M  V  K  C  K  L  Q  K  *  L  F  M  I  T  L  L  I  I  V  T  *  T  C  D  I  L  P  I  C  R  A  S  M  L  E  S  L  N  V  L  P  I  S  P  L  S :   S  A  L  W  S  H  C  K  G  T  Q  K  P  C  P  P  F  R  G  L  P  W  W  R  S  P  G  K  S  L  R  R  E  C  K  F  *  A  M :   L  S  K  S  T  I  M  M  L  S  L  C  F  V  L  L  V  S  Q  S  V  A  T  S  P  R  L  T  G  A  Y  C  L  L  L  S :   *  R  L  E  M  E  M  T  F  S  P  G  M  E  G  G  T  L  I  I  R :   D  S  L  S  Q  Q  R  *  S  V  G  L  L  *  T  F  L  H  A  V  M  S  V  V  *  S  E  I  *  Q  D  L  E  R  R  R  E  L :   V  W  K  L  H  L  K  C  L  K  S  L  H  S  L  E  G  L  H  L  L  S  E  L  T  K  C  L  K  R  S  S  Q  N  F  L  V  P  P  S  F  F  S  V  F  F  L  R  G  K  I  V  T  Y  M  :  V  H  G  S  E  K  I  W  L  I  M  V  *  *  L  N  A  W  L  L  E  E  L  M  I  S  I  S  Q  T  F  S  L  R  S  M  L  S :   L  V  V  *  I  L  C  *  L  R  R  F  L  L  P  S  P  W  Y  L  R  S  P  P  *  F  L  E  W  T  Y  H  M  A  L  P  A  S  L  M  F  H  Q  L  L  Q :   L  *  V  Q  G  S  G  R  Q  Y  L  V  I  E  L  Q  C  A  L  N  L  L  K  W  R  *  L  I  T  Y  L  K  K  F  Q  T  L  M  M  M  G  L  *   : G  N  F  C  *  I  F  M  *  V  P  G  K  G  S  L  S  T  L  *  Y  S   : G  M  V  S  V  N  L  N  L  I  K  F  *  T  *  N  W  T  S  S  L  R :   P  A  I  F  *  M  R  S  G  R  P  S  L  L  S  L  L  L  R  K  I  I  I  Q  S  F  S  S  L  D  L  L  I  M  F  H  Q  :  I  F  C  R  D  N  Y  R  *  Q  S  L  S  S  K  E  Q  *  L  L  S  V  R  P  C  W  N  D   : W  Y  D  S  T  Y  T  L  P  C  V  V  G  *  S  W  F  L  T  *  *  T  S  R  T  C  S  *  S  V  L  C  :  V  P  K  K  H  Y  C  Y  I  H  C :   G  S  D  K  L  C  P  F  G  R  H  T  G  G  S  M  D  E  I  R  G  C  I  R  D  I  V  K  P  W  W  S  D  *  C  W  S  S  Y  C  S  S  I  A  P  S  S  G  E  R  C  *  L  H  V  L  L  L  R  P  V  H  H  L  L  F  Y  S  T  R  L  M  Y  A  L  D  K  W  F  L  *  I  A  L  V  *  Q  H  L  E  Y  E  P  C  P  S  D  L  P  K  T  T  *  L  C  G  T  I  L  G  L  L  P  Y  S  G  L  M  H  I  F  R  A  S  V  L  L  N  N  F  A  M  Y  L  *  N  A  *  R  L  T  W  W  C  D  Y  A  S  I  M  L  F  Y  M  *  M  :  L  K  S  G  I  P  I  F  F  Q  S  K  *  I  H   </first_frame>
            <second_frame>  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F   : E  D  C  G  N  G  *  R  R  E  W  W  I  H  R  G  S  A  S  S  S  P  C  S  T  *  F  L  S  C  T  S  *  T  R  A  S  E  E  E  G  F  T  C  S  H  G  K  A  W  P  W  K  Q  G  T  K  D  S  D  P  Y  Q  S  L  *  S  E  R  V  *  C  *  W  T  L  L  S  L  Q   : C  C  L  I  L  *  G  W  S  T  C  R  G  K  R  H  W  Q  K  S  S  G  *  S  A  *  N  I  *  Y  R  I  G  W  E  G  F  C  I  *  W  G  E  E  F  V  H  H  R  F  T  T  *  K  *  T  R  V  H  S  C  T  R  *  H  N  I  *  S  :  E  Q  R  Y  Q  W  Q  L  *  P  W  Q  T  W  K  P  S  *  *  N  *  *  E  K  I  K  A  A  I  P  I  *  N  L  *  G  G  D  *  L  C  C  Q  D  S  N  A  G  D  C  K  C  F  A  R  S  R  V  *  E  L  S  R  S  L  A  S  F  G  Y  N  F  K  A  A  C  C  K  T  :  G  L  F  T  C  S  S  I  L  F  P  *  *  S  *  E  L  C  *  C  W  R  W  C  S  G  L  P  R  V  P  F  K  F  S  Y  H  P  V  G  I  V  I  E  H  * :   R  V  Y  H  Y  D  N  P  T  W  A  C  G  R  L  S  D  S  E  P  K  C  K  R  S  L  F  T  *  L  G  K   : G  K  T  R  V  E  E  P  A  S  E  D  C  S  R  *  P  R  I  Q  N  N  W  I  E  R  K  T  L  S  *  A  D  :  V  Y  S  K  A  E  E  Q  R  *  G  W  *  S  A  N  F  R  S  D  C  L  *  L  L  C  *  S  S  *  H  R  L  A  I  F  C  R  F  A  V  P  Q  C  W  K  A  *  T  S  Y  L  F  P  H  *   : A  L  H  F  G  L  I  A  K  V  H  K  S  L  V  H  L  S  E  G  F  L  G  G  E  V  Q  A  K  A  S  G  E  N  A  N  F  E  Q   : C  S  Q  N  Q  Q  L  *  C  *  A  S  A  S  F  F  W  C  L  N  Q  *  Q  L  H  P  G  *  R  A  R  T  A  C  S  *   : V  E  G  W  K  W  R  *  P  F  H  P  E  W  K  V  E  L  *  *  *   : E  I  L  *  A  S  K  G  R  A  L  G  C  C  E  L  F  C  T  L  *  C  P  W  S  S  Q  R  F  D  K  T  W  R  D  E  G  N   : *  C  G  S  S  I  *  S  V  *  R  V  S  T  A  *  K  G  S  T  C  C  Q  S  *  Q  N  V  *  R  D  P  V  K  T  S  W  C  P  Q  V  S  S  L  S  S  S  *  E  E  K  L  *  H  I  W :   S  M  E  A  K  K  S  G  *  S  W  Y  S  N  S  M  L  G  S  W  K  S  *  *  S  V  S  H  K  P  S  P  *  D  Q  C  *   : A  W  W  F  K  F  Y  V  S  C  G  D  F  S  F  H  P  H  G  I  *  G  P  H  H  D  S  W  N  G  R  I  T  W  L  S  R  P  V  *  C  S  I  N  C  C   : S  C  E  F  K  A  V  A  V  N  I  S  L  *  S  F  S  A  H  S  I  S  *  S  G  D  D  *  *  H  I  *  K  S  F  R  H  *  *  *  W  D  Y  E  :  G  T  F  A  R  F  L  C  E  F  R  E  K  E  A  *  A  H  Y  S  I  Q  :  G  W  C  Q  *  I  S  I  *  S  S  S  K  H  R  T  G  P  A  H  *   : G  L  Q  F  S  R  *  E  V  V  A  Q  V  C  Y  H  C  C  S  E  K  S  S  Y  K  V  F  P  V  W  I  S  *  *  C  S  T  R :   F  F  A  G  T  I  I  D  N  K  V  C  H  P  R  N  N  D  F  Y  L  C  A  H  A  G  M  I  :  G  T  T  R  P  T  H  Y  H  V  L  L  D  E  V  G  F  S  P  D  E  L  Q  E  L  V  H  N  L  S  Y  V :   Y  Q  R  S  T  T  A  I  S  I   : V  A  P  I  S  Y  A  H  L  A  A  T  Q  V  G  Q  W  M  K  F  E  D  A  S  E  T  S  S  S  H  G  G  L  T  N  A  G  P  V  T  V  P  Q  L  P  R  L  Q  E  N  V  A  S  S  M  F  F  C  *  G  L  C  T  T  S  C  F  T  L  R  G  *  C  M  L  *  T  N  G  F  C  K  *  L  *  F  D  S  T  W  S  T  N  L  V  L  V  T  S  Q  K  Q  L  S  Y  A  V  Q  Y  *  V  C  C  H  I  Q  V  S  C  I  F  F  A  L  L  F  S  *  T  I  L  L  C  I  C  K  M  H  R  D  *  P  G  G  V  T  M  H  Q  L  C  F  F  I  C  K  C :   *  N  Q  E  Y  L  Y  F  F  N  Q  N  K  S  I  </second_frame>
            <third_frame>   F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  L  :  K  I  V  V  M  A  E  E  E  N  G  G  S  T  E  A  L  P  P  P  P  P  V  P  L  N  F  S  P  A  Q  A  E  P  E  P  V  K  K  K  V  L  R  V  P  M  A  R  R  G  L  G  S  K  G  Q  K  I  P  I  L  T  N  H  F  K  V  N  V  S  N  V  D  G  H  F  F  H  Y  S  :  V  A  L  F  Y  E  D  G  R  P  V  E  G  K  G  I  G  R  K  V  L  D  R  V  H  E  T  Y  D  T  E  L  A  G  K  D  F  A  Y  D  G  E  K  S  L  F  T  I  G  S  L  P  R  N  K  L  E  F  T  V  V  L  D  D  I  T  S  N  R :   N  N  G  T  N  G  N  S  S  P  G  R  H  G  S  P  P  N  E  T  D  R  K  R  L  R  R  P  Y  Q  S  K  T  Y  K  V  E  I  S  F  A  A  K  I  P  M  Q  A  I  A  N  A  L  R  G  Q  E  S  E  N  S  Q  E  A  L  R  V  L  D  I  I  L  R  Q  H  A  A  K  Q :   G  C  L  L  V  R  Q  S  F  F  H  N  D  P  K  N  F  A  D  V  G  G  G  V  L  G  C  R  G  F  H  S  S  F  R  T  T  Q  S  G  L  S  L  N  I   : D  V  S  T  T  M  I  I  Q  P  G  P  V  V  D  F  L  I  A  N  Q  N  A  K  D  P  F  S  L  D  W  A  K  :  A  K  R  V  L  K  N  L  R  V  K  T  A  P  A  N  Q  E  F  K  I  T  G  L  S  E  K  P  C  R  E  Q  M :   F  T  L  K  Q  K  S  K  D  E  D  G  E  V  Q  T  S  E  V  T  V  Y  D  Y  F  V  N  H  R  N  I  D  L  R  Y  S  A  D  L  P  C  L  N  V  G  K  P  K  R  P  T  Y  F  P  I  E  :  L  C  T  L  V  S  L  Q  R  Y  T  K  A  L  S  T  F  Q  R  A  S  L  V  E  K  S  R  Q  K  P  Q  E  R  M  Q  I  L  S  N  :  A  L  K  I  N  N  Y  D  A  E  P  L  L  R  S  S  G  V  S  I  S  S  N  F  T  Q  V  D  G  R  V  L  P  A  P  K  :  L  K  A  G  N  G  D  D  L  F  T  R  N  G  R  W  N  F  N  N  K  :  R  F  F  E  P  A  K  V  E  R  W  A  V  V  N  F  S  A  R  C  D  V  R  G  L  V  R  D  L  T  R  L  G  E  T  K  G  I  :  S  V  E  A  P  F  E  V  F  E  E  S  P  Q  L  R  R  A  P  P  V  V  R  V  D  K  M  F  E  E  I  Q  S  K  L  P  G  A  P  K  F  L  L  C  L  L  P  E  R  K  N  C  D  I  Y   : G  P  W  K  R  K  N  L  A  D  H  G  I  V  T  Q  C  L  A  P  G  R  V  N  D  Q  Y  L  T  N  L  L  L  K  I  N  A  K  :  L  G  G  L  N  S  M  L  A  A  E  I  S  P  S  I  P  M  V  S  K  V  P  T  M  I  L  G  M  D  V  S  H  G  S  P  G  Q  S  D  V  P  S  I  A  A  :  V  V  S  S  R  Q  W  P  S  I  S  R  Y  R  A  S  V  R  T  Q  S  P  K  V  E  M  I  D  N  I  F  K  K  V  S  D  T  D  D  D  G  I  M  R :   E  L  L  L  D  F  Y  V  S  S  G  K  R  K  P  E  H  I  I  V  F  R :   D  G  V  S  E  S  Q  F  N  Q  V  L  N  I  E  L  D  Q  L  I  E  :  A  C  N  F  L  D  E  K  W  S  P  K  F  V  I  I  V  A  Q  K  N  H  H  T  K  F  F  Q  S  G  S  P  D  N  V  P  P   : D  F  L  Q  G  Q  L  *  I  T  K  F  V  I  Q  G  T  M  T  S  I  C  A  P  M  L  E  *  L :   V  R  L  D  L  H  I  T  M  C  C  W  M  K  L  V  S  H  L  M  N  F  K  N  L  F  I  I  C  P  M   : C  T  K  E  A  L  L  L  Y  P  L  :  W  L  R  *  V  M  P  I  W  P  P  H  R  W  V  N  G  *  N  S  R  M  H  Q  R  H  R  Q  A  M  V  V  *  L  M  L  V  Q  L  L  F  L  N  C  P  V  F  R  R  T  L  L  A  P  C  S  S  V  E  A  C  A  P  P  P  V  L  L  Y  A  V  N  V  C  S  R  Q  M  V  S  V  N  S  S  S  L  T  A  L  G  V  R  T  L  S  *  *  P  P  K  N  N  L  V  M  R  Y  N  T  R  S  V  A  I  F  R  S  H  A  Y  F  S  R  F  C  S  P  E  Q  F  C  Y  V  S  V  K  C  I  E  I  N  L  V  V  *  L  C  I  N  Y  A  F  L  Y  V  N   : A  K  I  R  N  T  Y  I  F  S  I  K  I  N  P  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="109344" stop="109255"/>
                    <exon start="109104" stop="108865"/>
                    <exon start="108766" stop="108561"/>
                    <exon start="108479" stop="108243"/>
                    <exon start="108068" stop="107932"/>
                    <exon start="107855" stop="107758"/>
                    <exon start="107680" stop="107583"/>
                    <exon start="107457" stop="107289"/>
                    <exon start="107204" stop="107088"/>
                    <exon start="107010" stop="106903"/>
                    <exon start="106817" stop="106755"/>
                    <exon start="106577" stop="106464"/>
                    <exon start="106387" stop="106222"/>
                    <exon start="106135" stop="106023"/>
                    <exon start="105919" stop="105782"/>
                    <exon start="105703" stop="105573"/>
                    <exon start="105039" stop="104974"/>
                    <exon start="104597" stop="104534"/>
                    <exon start="104445" stop="104334"/>
                    <exon start="104268" stop="104246"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>2487</number_coding_nucleotides>
                  <number_encoded_amino_acids>829</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFFFFFFFFFFFFFFFFFFFFFFFFFFFFLKIVVMAEEENGGSTEALPPPPPVPLNFSPAQAEPEPVKKKVLRVPMARRGLGSKGQKIPILTNHFKVNVSNVDGHFFHYSVALFYEDGRPVEGKGIGRKVLDRVHETYDTELAGKDFAYDGEKSLFTIGSLPRNKLEFTVVLDDITSNRNNGTNGNSSPGRHGSPPNETDRKRLRRPYQSKTYKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNAKDPFSLDWAKAKRVLKNLRVKTAPANQEFKITGLSEKPCREQMFTLKQKSKDEDGEVQTSEVTVYDYFVNHRNIDLRYSADLPCLNVGKPKRPTYFPIELCTLVSLQRYTKALSTFQRASLVEKSRQKPQERMQILSNALKINNYDAEPLLRSSGVSISSNFTQVDGRVLPAPKLKAGNGDDLFTRNGRWNFNNKRFFEPAKVERWAVVNFSARCDVRGLVRDLTRLGETKGISVEAPFEVFEESPQLRRAPPVVRVDKMFEEIQSKLPGAPKFLLCLLPERKNCDIYGPWKRKNLADHGIVTQCLAPGRVNDQYLTNLLLKINAKLGGLNSMLAAEISPSIPMVSKVPTMILGMDVSHGSPGQSDVPSIAAVVSSRQWPSISRYRASVRTQSPKVEMIDNIFKKVSDTDDDGIMRELLLDFYVSSGKRKPEHIIVFRDGVSESQFNQVLNIELDQLIEACNFLDEKWSPKFVIIVAQKNHHTKFFQSGSPDNVPPDFLQGQL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="109346" e_stop="109255"/>
            <exon e_start="109104" e_stop="108865"/>
            <exon e_start="108766" e_stop="108561"/>
            <exon e_start="108479" e_stop="108243"/>
            <exon e_start="108068" e_stop="107932"/>
            <exon e_start="107855" e_stop="107758"/>
            <exon e_start="107680" e_stop="107583"/>
            <exon e_start="107457" e_stop="107289"/>
            <exon e_start="107204" e_stop="107088"/>
            <exon e_start="107010" e_stop="106903"/>
            <exon e_start="106817" e_stop="106755"/>
            <exon e_start="106577" e_stop="106464"/>
            <exon e_start="106387" e_stop="106222"/>
            <exon e_start="106135" e_stop="106023"/>
            <exon e_start="105919" e_stop="105782"/>
            <exon e_start="105703" e_stop="105573"/>
            <exon e_start="105039" e_stop="104726"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.113" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.942" acc_prob="0.441" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.997" e_score="0.955"/>
          <exon-intron don_prob="0.746" acc_prob="0.994" e_score="0.959"/>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.956" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.537" acc_prob="0.849" e_score="1.000"/>
          <exon-intron don_prob="0.742" acc_prob="0.955" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.773" e_score="1.000"/>
          <exon-intron don_prob="0.865" acc_prob="0.942" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="109346" e_stop="109255" e_length="92"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="109254" i_stop="109105" i_length="150"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="109104" e_stop="108865" e_length="240"/>
          </exon>
          <intron i_serial="2" don_prob="0.980" acc_prob="0.993">
            <gDNA_intron_boundary i_start="108864" i_stop="108767" i_length="98"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="108766" e_stop="108561" e_length="206"/>
          </exon>
          <intron i_serial="3" don_prob="0.113" acc_prob="1.000">
            <gDNA_intron_boundary i_start="108560" i_stop="108480" i_length="81"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="108479" e_stop="108243" e_length="237"/>
          </exon>
          <intron i_serial="4" don_prob="0.942" acc_prob="0.441">
            <gDNA_intron_boundary i_start="108242" i_stop="108069" i_length="174"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="108068" e_stop="107932" e_length="137"/>
          </exon>
          <intron i_serial="5" don_prob="0.990" acc_prob="0.979">
            <gDNA_intron_boundary i_start="107931" i_stop="107856" i_length="76"/>
          </intron>
          <exon e_serial="6" e_score="0.955">
            <gDNA_exon_boundary e_start="107855" e_stop="107758" e_length="98"/>
          </exon>
          <intron i_serial="6" don_prob="0.974" acc_prob="0.997">
            <gDNA_intron_boundary i_start="107757" i_stop="107681" i_length="77"/>
          </intron>
          <exon e_serial="7" e_score="0.959">
            <gDNA_exon_boundary e_start="107680" e_stop="107583" e_length="98"/>
          </exon>
          <intron i_serial="7" don_prob="0.746" acc_prob="0.994">
            <gDNA_intron_boundary i_start="107582" i_stop="107458" i_length="125"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="107457" e_stop="107289" e_length="169"/>
          </exon>
          <intron i_serial="8" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="107288" i_stop="107205" i_length="84"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="107204" e_stop="107088" e_length="117"/>
          </exon>
          <intron i_serial="9" don_prob="0.990" acc_prob="0.956">
            <gDNA_intron_boundary i_start="107087" i_stop="107011" i_length="77"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="107010" e_stop="106903" e_length="108"/>
          </exon>
          <intron i_serial="10" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="106902" i_stop="106818" i_length="85"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="106817" e_stop="106755" e_length="63"/>
          </exon>
          <intron i_serial="11" don_prob="0.994" acc_prob="0.995">
            <gDNA_intron_boundary i_start="106754" i_stop="106578" i_length="177"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="106577" e_stop="106464" e_length="114"/>
          </exon>
          <intron i_serial="12" don_prob="0.537" acc_prob="0.849">
            <gDNA_intron_boundary i_start="106463" i_stop="106388" i_length="76"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="106387" e_stop="106222" e_length="166"/>
          </exon>
          <intron i_serial="13" don_prob="0.742" acc_prob="0.955">
            <gDNA_intron_boundary i_start="106221" i_stop="106136" i_length="86"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="106135" e_stop="106023" e_length="113"/>
          </exon>
          <intron i_serial="14" don_prob="0.974" acc_prob="0.773">
            <gDNA_intron_boundary i_start="106022" i_stop="105920" i_length="103"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="105919" e_stop="105782" e_length="138"/>
          </exon>
          <intron i_serial="15" don_prob="0.865" acc_prob="0.942">
            <gDNA_intron_boundary i_start="105781" i_stop="105704" i_length="78"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="105703" e_stop="105573" e_length="131"/>
          </exon>
          <intron i_serial="16" don_prob="0.996" acc_prob="0.994">
            <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533"/>
          </intron>
          <exon e_serial="17" e_score="1.000">
            <gDNA_exon_boundary e_start="105039" e_stop="104726" e_length="314"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109346" stop="109255"/>
              <exon start="109104" stop="108865"/>
              <exon start="108766" stop="108561"/>
              <exon start="108479" stop="108365"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735498" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109104" stop="108865"/>
              <exon start="108766" stop="108561"/>
              <exon start="108479" stop="108243"/>
              <exon start="108068" stop="107932"/>
              <exon start="107855" stop="107823"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736032" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109104" stop="108865"/>
              <exon start="108766" stop="108561"/>
              <exon start="108479" stop="108243"/>
              <exon start="108068" stop="107932"/>
              <exon start="107855" stop="107847"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702593" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109104" stop="108865"/>
              <exon start="108766" stop="108561"/>
              <exon start="108479" stop="108243"/>
              <exon start="108068" stop="107941"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738103" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109104" stop="108865"/>
              <exon start="108766" stop="108561"/>
              <exon start="108479" stop="108243"/>
              <exon start="108068" stop="108038"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E409056" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109104" stop="108865"/>
              <exon start="108766" stop="108561"/>
              <exon start="108479" stop="108243"/>
              <exon start="108068" stop="108053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736447" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109104" stop="108865"/>
              <exon start="108766" stop="108561"/>
              <exon start="108479" stop="108313"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740538" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109104" stop="108865"/>
              <exon start="108766" stop="108561"/>
              <exon start="108479" stop="108365"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568346" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109104" stop="108865"/>
              <exon start="108766" stop="108561"/>
              <exon start="108479" stop="108419"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323951" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109024" stop="108865"/>
              <exon start="108766" stop="108561"/>
              <exon start="108479" stop="108420"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E468456" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108749" stop="108561"/>
              <exon start="108479" stop="108243"/>
              <exon start="108068" stop="107932"/>
              <exon start="107855" stop="107837"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E452616" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107845" stop="107758"/>
              <exon start="107680" stop="107583"/>
              <exon start="107457" stop="107289"/>
              <exon start="107204" stop="107088"/>
              <exon start="107010" stop="106974"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458022" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107607" stop="107583"/>
              <exon start="107457" stop="107289"/>
              <exon start="107204" stop="107088"/>
              <exon start="107010" stop="106903"/>
              <exon start="106817" stop="106755"/>
              <exon start="106577" stop="106464"/>
              <exon start="106387" stop="106230"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543443" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107606" stop="107583"/>
              <exon start="107457" stop="107289"/>
              <exon start="107204" stop="107088"/>
              <exon start="107010" stop="106903"/>
              <exon start="106817" stop="106755"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107158" stop="107088"/>
              <exon start="107010" stop="106903"/>
              <exon start="106817" stop="106755"/>
              <exon start="106577" stop="106464"/>
              <exon start="106387" stop="106222"/>
              <exon start="106135" stop="106023"/>
              <exon start="105919" stop="105782"/>
              <exon start="105703" stop="105581"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700707" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106337" stop="106222"/>
              <exon start="106135" stop="106023"/>
              <exon start="105919" stop="105782"/>
              <exon start="105703" stop="105573"/>
              <exon start="105039" stop="104726"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707575" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106323" stop="106222"/>
              <exon start="106135" stop="106023"/>
              <exon start="105919" stop="105782"/>
              <exon start="105703" stop="105573"/>
              <exon start="105039" stop="105014"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337292" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106241" stop="106222"/>
              <exon start="106135" stop="106023"/>
              <exon start="105919" stop="105808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278487" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106236" stop="106222"/>
              <exon start="106135" stop="106023"/>
              <exon start="105919" stop="105782"/>
              <exon start="105703" stop="105573"/>
              <exon start="105039" stop="104995"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472282" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG : AAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGT : GTTGCCTTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCG : GAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCATACCAATCTAAAACTTATAAGGTGGAGATTAGCTTTGCTGCCAAGATTCCAATGCAGGCGATTGCAAATGCTTTGCGAGGTCAAGAGTCTGAGAACTCTCAAGAAGCCTTGCGAGTTTTGGATATAATTTTAAGGCAGCATGCTGCAAAACA : GGGTTGTTTACTTGTTCGTCAATCCTTTTTCCATAATGATCCTAAGAACTTTGCTGATGTTGGCGGTGGTGTTCTGGGCTGCCGAGGGTTCCATTCAAGTTTTCGTACCACCCAGTCGGGATTGTCATTGAACATTG : ACGTGTCTACCACTATGATAATCCAACCTGGGCCTGTGGTCGACTTTCTGATAGCGAACCAAAATGCAAAAGATCCCTTTTCACTTGATTGGGCAAAG : GCAAAACGCGTGTTGAAGAACCTGCGAGTGAAGACTGCTCCCGCTAACCAAGAATTCAAAATAACTGGATTGAGCGAAAAACCTTGTCGTGAGCAGAT : GTTTACTCTAAAGCAGAAGAGCAAAGATGAGGATGGTGAAGTGCAAACTTCAGAAGTGACTGTTTATGATTACTTTGTTAATCATCGTAACATAGACTTGCGATATTCTGCCGATTTGCCGTGCCTCAATGTTGGAAAGCCTAAACGTCCTACCTATTTCCCCATTGAG : CTCTGCACTTTGGTCTCATTGCAAAGGTACACAAAAGCCTTGTCCACCTTTCAGAGGGCTTCCTTGGTGGAGAAGTCCAGGCAAAAGCCTCAGGAGAGAATGCAAATTTTGAGCAAT : GCTCTCAAAATCAACAATTATGATGCTGAGCCTCTGCTTCGTTCTTCTGGTGTCTCAATCAGTAGCAACTTCACCCAGGTTGACGGGCGCGTACTGCCTGCTCCTAAG : TTGAAGGCTGGAAATGGAGATGACCTTTTCACCCGGAATGGAAGGTGGAACTTTAATAATAAG : AGATTCTTTGAGCCAGCAAAGGTAGAGCGTTGGGCTGTTGTGAACTTTTCTGCACGCTGTGATGTCCGTGGTCTAGTCAGAGATTTGACAAGACTTGGAGAGACGAAGGGAATT : AGTGTGGAAGCTCCATTTGAAGTGTTTGAAGAGTCTCCACAGCTTAGAAGGGCTCCACCTGTTGTCAGAGTTGACAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGGTGCCCCCAAGTTTCTTCTCTGTCTTCTTCCTGAGAGGAAAAATTGTGACATATATG : GTCCATGGAAGCGAAAAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAG : CTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCA : GTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAG : GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATAT</gDNA_template>
            <first_frame> F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  * :   R  L  W  *  W  L  K  K  R  M  V  D  P  Q  R  L  C  L  L  L  P  L  F  H  L  I  S  L  L  H  K  L  N  Q  S  Q  *  R  R  R  F  Y  V  F  P  W  Q  G  V  A  L  E  A  R  D  K  R  F  R  S  L  P  I  T  L  K  *  T  C  L  M  L  M  D  T  S  F  I  T  V :   L  P  Y  F  M  R  M  V  D  L  S  R  E  K  A  L  A  E  K  F  W  I  E  C  M  K  H  M  I  Q  N  W  L  G  R  I  L  H  M  M  G  R  R  V  C  S  P  S  V  H  Y  L  E  I  N  *  S  S  Q  L  Y  *  M  T  *  H  L  I   : G  T  T  V  P  M  A  T  L  A  L  A  D  M  E  A  L  L  M  K  L  I  G  K  D  *  G  G  H  T  N  L  K  L  I  R  W  R  L  A  L  L  P  R  F  Q  C  R  R  L  Q  M  L  C  E  V  K  S  L  R  T  L  K  K  P  C  E  F  W  I  *  F  *  G  S  M  L  Q  N   : R  V  V  Y  L  F  V  N  P  F  S  I  M  I  L  R  T  L  L  M  L  A  V  V  F  W  A  A  E  G  S  I  Q  V  F  V  P  P  S  R  D  C  H  *  T  L  :  T  C  L  P  L  *  *  S  N  L  G  L  W  S  T  F  *  *  R  T  K  M  Q  K  I  P  F  H  L  I  G  Q  R :   Q  N  A  C  *  R  T  C  E  *  R  L  L  P  L  T  K  N  S  K  *  L  D  *  A  K  N  L  V  V  S  R   : C  L  L  *  S  R  R  A  K  M  R  M  V  K  C  K  L  Q  K  *  L  F  M  I  T  L  L  I  I  V  T  *  T  C  D  I  L  P  I  C  R  A  S  M  L  E  S  L  N  V  L  P  I  S  P  L  S :   S  A  L  W  S  H  C  K  G  T  Q  K  P  C  P  P  F  R  G  L  P  W  W  R  S  P  G  K  S  L  R  R  E  C  K  F  *  A  M :   L  S  K  S  T  I  M  M  L  S  L  C  F  V  L  L  V  S  Q  S  V  A  T  S  P  R  L  T  G  A  Y  C  L  L  L  S :   *  R  L  E  M  E  M  T  F  S  P  G  M  E  G  G  T  L  I  I  R :   D  S  L  S  Q  Q  R  *  S  V  G  L  L  *  T  F  L  H  A  V  M  S  V  V  *  S  E  I  *  Q  D  L  E  R  R  R  E  L :   V  W  K  L  H  L  K  C  L  K  S  L  H  S  L  E  G  L  H  L  L  S  E  L  T  K  C  L  K  R  S  S  Q  N  F  L  V  P  P  S  F  F  S  V  F  F  L  R  G  K  I  V  T  Y  M  :  V  H  G  S  E  K  I  W  L  I  M  V  *  *  L  N  A  W  L  L  E  E  L  M  I  S  I  S  Q  T  F  S  L  R  S  M  L  S :   L  V  V  *  I  L  C  *  L  R  R  F  L  L  P  S  P  W  Y  L  R  S  P  P  *  F  L  E  W  T  Y  H  M  A  L  P  A  S  L  M  F  H  Q  L  L  Q :   L  *  V  Q  G  S  G  R  Q  Y  L  V  I  E  L  Q  C  A  L  N  L  L  K  W  R  *  L  I  T  Y  L  K  K  F  Q  T  L  M  M  M  G  L  *   : G  N  F  C  *  I  F  M  *  V  P  G  K  G  S  L  S  T  L  *  Y  S  G  D  L  T  Q  P  V  H  H  F  A  F  S  K  L  Y  T  F  *  V  L  L  L  F  Y  *  H  Y  T  C  D  E  C  L  N  L  Q  K  F  L  L  S  M  T  L  V  S  F  Y  G  S  T  S  F  S  A  I  F  I  P  F  I  Y  C  F  R  G  F  M  *  L  T  *  L  L  G  M  R  S  S  S  *  Y </first_frame>
            <second_frame>  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F   : E  D  C  G  N  G  *  R  R  E  W  W  I  H  R  G  S  A  S  S  S  P  C  S  T  *  F  L  S  C  T  S  *  T  R  A  S  E  E  E  G  F  T  C  S  H  G  K  A  W  P  W  K  Q  G  T  K  D  S  D  P  Y  Q  S  L  *  S  E  R  V  *  C  *  W  T  L  L  S  L  Q   : C  C  L  I  L  *  G  W  S  T  C  R  G  K  R  H  W  Q  K  S  S  G  *  S  A  *  N  I  *  Y  R  I  G  W  E  G  F  C  I  *  W  G  E  E  F  V  H  H  R  F  T  T  *  K  *  T  R  V  H  S  C  T  R  *  H  N  I  *  S  :  E  Q  R  Y  Q  W  Q  L  *  P  W  Q  T  W  K  P  S  *  *  N  *  *  E  K  I  K  A  A  I  P  I  *  N  L  *  G  G  D  *  L  C  C  Q  D  S  N  A  G  D  C  K  C  F  A  R  S  R  V  *  E  L  S  R  S  L  A  S  F  G  Y  N  F  K  A  A  C  C  K  T  :  G  L  F  T  C  S  S  I  L  F  P  *  *  S  *  E  L  C  *  C  W  R  W  C  S  G  L  P  R  V  P  F  K  F  S  Y  H  P  V  G  I  V  I  E  H  * :   R  V  Y  H  Y  D  N  P  T  W  A  C  G  R  L  S  D  S  E  P  K  C  K  R  S  L  F  T  *  L  G  K   : G  K  T  R  V  E  E  P  A  S  E  D  C  S  R  *  P  R  I  Q  N  N  W  I  E  R  K  T  L  S  *  A  D  :  V  Y  S  K  A  E  E  Q  R  *  G  W  *  S  A  N  F  R  S  D  C  L  *  L  L  C  *  S  S  *  H  R  L  A  I  F  C  R  F  A  V  P  Q  C  W  K  A  *  T  S  Y  L  F  P  H  *   : A  L  H  F  G  L  I  A  K  V  H  K  S  L  V  H  L  S  E  G  F  L  G  G  E  V  Q  A  K  A  S  G  E  N  A  N  F  E  Q   : C  S  Q  N  Q  Q  L  *  C  *  A  S  A  S  F  F  W  C  L  N  Q  *  Q  L  H  P  G  *  R  A  R  T  A  C  S  *   : V  E  G  W  K  W  R  *  P  F  H  P  E  W  K  V  E  L  *  *  *   : E  I  L  *  A  S  K  G  R  A  L  G  C  C  E  L  F  C  T  L  *  C  P  W  S  S  Q  R  F  D  K  T  W  R  D  E  G  N   : *  C  G  S  S  I  *  S  V  *  R  V  S  T  A  *  K  G  S  T  C  C  Q  S  *  Q  N  V  *  R  D  P  V  K  T  S  W  C  P  Q  V  S  S  L  S  S  S  *  E  E  K  L  *  H  I  W :   S  M  E  A  K  K  S  G  *  S  W  Y  S  N  S  M  L  G  S  W  K  S  *  *  S  V  S  H  K  P  S  P  *  D  Q  C  *   : A  W  W  F  K  F  Y  V  S  C  G  D  F  S  F  H  P  H  G  I  *  G  P  H  H  D  S  W  N  G  R  I  T  W  L  S  R  P  V  *  C  S  I  N  C  C   : S  C  E  F  K  A  V  A  V  N  I  S  L  *  S  F  S  A  H  S  I  S  *  S  G  D  D  *  *  H  I  *  K  S  F  R  H  *  *  *  W  D  Y  E  :  G  T  F  A  R  F  L  C  E  F  R  E  K  E  A  *  A  H  Y  S  I  Q  V  I  *  P  S  L  F  T  I  L  L  S  A  N  Y  I  H  S  K  C  Y  C  S  F  I  D  T  T  L  V  M  N  V  *  I  F  R  N  F  Y  *  A  *  H  W  *  V  F  M  V  L  P  H  F  L  P  F  L  S  R  L  S  I  V  L  E  D  S  C  S  *  P  N  S  W  A  *  G  V  A  L  D   </second_frame>
            <third_frame>   F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  L  :  K  I  V  V  M  A  E  E  E  N  G  G  S  T  E  A  L  P  P  P  P  P  V  P  L  N  F  S  P  A  Q  A  E  P  E  P  V  K  K  K  V  L  R  V  P  M  A  R  R  G  L  G  S  K  G  Q  K  I  P  I  L  T  N  H  F  K  V  N  V  S  N  V  D  G  H  F  F  H  Y  S  :  V  A  L  F  Y  E  D  G  R  P  V  E  G  K  G  I  G  R  K  V  L  D  R  V  H  E  T  Y  D  T  E  L  A  G  K  D  F  A  Y  D  G  E  K  S  L  F  T  I  G  S  L  P  R  N  K  L  E  F  T  V  V  L  D  D  I  T  S  N  R :   N  N  G  T  N  G  N  S  S  P  G  R  H  G  S  P  P  N  E  T  D  R  K  R  L  R  R  P  Y  Q  S  K  T  Y  K  V  E  I  S  F  A  A  K  I  P  M  Q  A  I  A  N  A  L  R  G  Q  E  S  E  N  S  Q  E  A  L  R  V  L  D  I  I  L  R  Q  H  A  A  K  Q :   G  C  L  L  V  R  Q  S  F  F  H  N  D  P  K  N  F  A  D  V  G  G  G  V  L  G  C  R  G  F  H  S  S  F  R  T  T  Q  S  G  L  S  L  N  I   : D  V  S  T  T  M  I  I  Q  P  G  P  V  V  D  F  L  I  A  N  Q  N  A  K  D  P  F  S  L  D  W  A  K  :  A  K  R  V  L  K  N  L  R  V  K  T  A  P  A  N  Q  E  F  K  I  T  G  L  S  E  K  P  C  R  E  Q  M :   F  T  L  K  Q  K  S  K  D  E  D  G  E  V  Q  T  S  E  V  T  V  Y  D  Y  F  V  N  H  R  N  I  D  L  R  Y  S  A  D  L  P  C  L  N  V  G  K  P  K  R  P  T  Y  F  P  I  E  :  L  C  T  L  V  S  L  Q  R  Y  T  K  A  L  S  T  F  Q  R  A  S  L  V  E  K  S  R  Q  K  P  Q  E  R  M  Q  I  L  S  N  :  A  L  K  I  N  N  Y  D  A  E  P  L  L  R  S  S  G  V  S  I  S  S  N  F  T  Q  V  D  G  R  V  L  P  A  P  K  :  L  K  A  G  N  G  D  D  L  F  T  R  N  G  R  W  N  F  N  N  K  :  R  F  F  E  P  A  K  V  E  R  W  A  V  V  N  F  S  A  R  C  D  V  R  G  L  V  R  D  L  T  R  L  G  E  T  K  G  I  :  S  V  E  A  P  F  E  V  F  E  E  S  P  Q  L  R  R  A  P  P  V  V  R  V  D  K  M  F  E  E  I  Q  S  K  L  P  G  A  P  K  F  L  L  C  L  L  P  E  R  K  N  C  D  I  Y   : G  P  W  K  R  K  N  L  A  D  H  G  I  V  T  Q  C  L  A  P  G  R  V  N  D  Q  Y  L  T  N  L  L  L  K  I  N  A  K  :  L  G  G  L  N  S  M  L  A  A  E  I  S  P  S  I  P  M  V  S  K  V  P  T  M  I  L  G  M  D  V  S  H  G  S  P  G  Q  S  D  V  P  S  I  A  A  :  V  V  S  S  R  Q  W  P  S  I  S  R  Y  R  A  S  V  R  T  Q  S  P  K  V  E  M  I  D  N  I  F  K  K  V  S  D  T  D  D  D  G  I  M  R :   E  L  L  L  D  F  Y  V  S  S  G  K  R  K  P  E  H  I  I  V  F  R  *  S  N  P  A  C  S  P  F  C  F  Q  Q  I  I  Y  I  L  S  A  I  A  L  L  L  T  L  H  L  *  *  M  S  K  S  S  E  I  F  I  E  H  D  I  G  E  F  L  W  F  Y  L  I  F  C  H  F  Y  P  V  Y  L  L  F  *  R  I  H  V  A  D  L  T  L  G  H  E  E  *  L  L  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="109344" stop="109255"/>
                    <exon start="109104" stop="108865"/>
                    <exon start="108766" stop="108561"/>
                    <exon start="108479" stop="108243"/>
                    <exon start="108068" stop="107932"/>
                    <exon start="107855" stop="107758"/>
                    <exon start="107680" stop="107583"/>
                    <exon start="107457" stop="107289"/>
                    <exon start="107204" stop="107088"/>
                    <exon start="107010" stop="106903"/>
                    <exon start="106817" stop="106755"/>
                    <exon start="106577" stop="106464"/>
                    <exon start="106387" stop="106222"/>
                    <exon start="106135" stop="106023"/>
                    <exon start="105919" stop="105782"/>
                    <exon start="105703" stop="105573"/>
                    <exon start="105039" stop="104970"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>2292</number_coding_nucleotides>
                  <number_encoded_amino_acids>764</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFFFFFFFFFFFFFFFFFFFFFFFFFFFFLKIVVMAEEENGGSTEALPPPPPVPLNFSPAQAEPEPVKKKVLRVPMARRGLGSKGQKIPILTNHFKVNVSNVDGHFFHYSVALFYEDGRPVEGKGIGRKVLDRVHETYDTELAGKDFAYDGEKSLFTIGSLPRNKLEFTVVLDDITSNRNNGTNGNSSPGRHGSPPNETDRKRLRRPYQSKTYKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNAKDPFSLDWAKAKRVLKNLRVKTAPANQEFKITGLSEKPCREQMFTLKQKSKDEDGEVQTSEVTVYDYFVNHRNIDLRYSADLPCLNVGKPKRPTYFPIELCTLVSLQRYTKALSTFQRASLVEKSRQKPQERMQILSNALKINNYDAEPLLRSSGVSISSNFTQVDGRVLPAPKLKAGNGDDLFTRNGRWNFNNKRFFEPAKVERWAVVNFSARCDVRGLVRDLTRLGETKGISVEAPFEVFEESPQLRRAPPVVRVDKMFEEIQSKLPGAPKFLLCLLPERKNCDIYGPWKRKNLADHGIVTQCLAPGRVNDQYLTNLLLKINAKLGGLNSMLAAEISPSIPMVSKVPTMILGMDVSHGSPGQSDVPSIAAVVSSRQWPSISRYRASVRTQSPKVEMIDNIFKKVSDTDDDGIMRELLLDFYVSSGKRKPEHIIVFR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="105753" e_stop="105573"/>
            <exon e_start="105039" e_stop="104534"/>
            <exon e_start="104445" e_stop="104334"/>
            <exon e_start="104257" e_stop="104184"/>
            <exon e_start="104091" e_stop="103997"/>
            <exon e_start="103893" e_stop="103862"/>
            <exon e_start="103779" e_stop="103267"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.946" acc_prob="0.929" e_score="0.998"/>
          <exon-intron don_prob="0.900" acc_prob="0.890" e_score="1.000"/>
          <exon-intron don_prob="0.970" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.827" acc_prob="0.932" e_score="1.000"/>
          <exon-intron don_prob="0.862" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="105753" e_stop="105573" e_length="181"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.994">
            <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="105039" e_stop="104534" e_length="506"/>
          </exon>
          <intron i_serial="2" don_prob="0.946" acc_prob="0.929">
            <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="104445" e_stop="104334" e_length="112"/>
          </exon>
          <intron i_serial="3" don_prob="0.900" acc_prob="0.890">
            <gDNA_intron_boundary i_start="104333" i_stop="104258" i_length="76"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="104257" e_stop="104184" e_length="74"/>
          </exon>
          <intron i_serial="4" don_prob="0.970" acc_prob="0.988">
            <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="104091" e_stop="103997" e_length="95"/>
          </exon>
          <intron i_serial="5" don_prob="0.827" acc_prob="0.932">
            <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="103893" e_stop="103862" e_length="32"/>
          </exon>
          <intron i_serial="6" don_prob="0.862" acc_prob="0.997">
            <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="103779" e_stop="103267" e_length="513"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105753" stop="105573"/>
              <exon start="105039" stop="104534"/>
              <exon start="104445" stop="104440"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105752" stop="105573"/>
              <exon start="105039" stop="104690"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246864" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104603" stop="104534"/>
              <exon start="104445" stop="104334"/>
              <exon start="104257" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103641"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228430" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104578" stop="104534"/>
              <exon start="104445" stop="104334"/>
              <exon start="104257" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103298"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104429" stop="104334"/>
              <exon start="104257" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103306"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E696186" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104420" stop="104334"/>
              <exon start="104257" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E608098" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104412" stop="104334"/>
              <exon start="104257" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103353"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369981" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104412" stop="104334"/>
              <exon start="104257" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103509"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259504" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104412" stop="104334"/>
              <exon start="104257" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103509"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259622" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104412" stop="104334"/>
              <exon start="104257" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103557"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104242" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103413"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325381" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104189" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103267"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738581" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104050" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103417"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245512" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103889" stop="103862"/>
              <exon start="103779" stop="103451"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103886" stop="103862"/>
              <exon start="103779" stop="103311"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E593165" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTATACCCAATTTTTCAAAGAATTTCATTTTATACGATTGCTTTGTCAGGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAG : GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAG : GCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAG : GGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATT : GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT : GTACCAAAGAAGCACTACTGCTATATCCATTG : TGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAACAACTTAGTTATGCGGTACAATACTAGGTCTGTTGCCATATTCAGGTCTCATGCATATTTTTCGCGCTTCTGTTCTCCTGAACAATTTTGCTATGTATCTGTAAAATGCATAGAGATTAACCTGGTGGTGTGACTATGCATCAATTATGCTTTTTTATATGTAAATGGTAATATATAACTTGTTTTTTTCCCGCTTTTATTAGGGAAGTTA</gDNA_template>
            <first_frame> F  I  P  N  F  S  K  N  F  I  L  Y  D  C  F  V  R  L  *  V  Q  G  S  G  R  Q  Y  L  V  I  E  L  Q  C  A  L  N  L  L  K  W  R  *  L  I  T  Y  L  K  K  F  Q  T  L  M  M  M  G  L  *   : G  N  F  C  *  I  F  M  *  V  P  G  K  G  S  L  S  T  L  *  Y  S  G  D  L  T  Q  P  V  H  H  F  A  F  S  K  L  Y  T  F  *  V  L  L  L  F  Y  *  H  Y  T  C  D  E  C  L  N  L  Q  K  F  L  L  S  M  T  L  V  S  F  Y  G  S  T  S  F  S  A  I  F  I  P  F  I  Y  C  F  R  G  F  M  *  L  T  *  L  L  G  M  R  S  S  S  *  Y  F  S  C  S  I  V  C  C  Y  Y  H  Y  R  V  F  H  L  P  N  I  V  T  *  Q  *  T  L  Y  T  S  L  T  V  L  L  L  A  P  F  E  N  V  R  D  G  V  S  E  S  Q  F  N  Q  V  L  N  I  E  L  D  Q  L  I  E  :  A  C  N  F  L  D  E  K  W  S  P  K  F  V  I  I  V  A  Q  K  N  H  H  T  K  F  F  Q  S  G  S  P  D  N  V  P  P   : G  T  I  I  D  N  K  V  C  H  P  R  N  N  D  F  Y  L  C  A  H  A  G  M  I  :  G  T  T  R  P  T  H  Y  H  V  L  L  D  E  V  G  F  S  P  D  E  L  Q  E  L  V  H  N  L  S  Y  V :   Y  Q  R  S  T  T  A  I  S  I   : V  A  P  I  S  Y  A  H  L  A  A  T  Q  V  G  Q  W  M  K  F  E  D  A  S  E  T  S  S  S  H  G  G  L  T  N  A  G  P  V  T  V  P  Q  L  P  R  L  Q  E  N  V  A  S  S  M  F  F  C  *  G  L  C  T  T  S  C  F  T  L  R  G  *  C  M  L  *  T  N  G  F  C  K  *  L  *  F  D  S  T  W  S  T  N  L  V  L  V  T  S  Q  K  Q  L  S  Y  A  V  Q  Y  *  V  C  C  H  I  Q  V  S  C  I  F  F  A  L  L  F  S  *  T  I  L  L  C  I  C  K  M  H  R  D  *  P  G  G  V  T  M  H  Q  L  C  F  F  I  C  K  W  *  Y  I  T  C  F  F  P  A  F  I  R  E  V  </first_frame>
            <second_frame>  L  Y  P  I  F  Q  R  I  S  F  Y  T  I  A  L  S  G  C  E  F  K  A  V  A  V  N  I  S  L  *  S  F  S  A  H  S  I  S  *  S  G  D  D  *  *  H  I  *  K  S  F  R  H  *  *  *  W  D  Y  E  :  G  T  F  A  R  F  L  C  E  F  R  E  K  E  A  *  A  H  Y  S  I  Q  V  I  *  P  S  L  F  T  I  L  L  S  A  N  Y  I  H  S  K  C  Y  C  S  F  I  D  T  T  L  V  M  N  V  *  I  F  R  N  F  Y  *  A  *  H  W  *  V  F  M  V  L  P  H  F  L  P  F  L  S  R  L  S  I  V  L  E  D  S  C  S  *  P  N  S  W  A  *  G  V  A  L  D  I  S  L  V  P  S  F  V  V  I  T  T  T  V  C  S  T  C  L  T  L  S  R  S  S  E  L  C  T  L  L  *  R  F  C  Y  W  P  L  L  K  M  S  G  M  V  S  V  N  L  N  L  I  K  F  *  T  *  N  W  T  S  S  L  R :   P  A  I  F  *  M  R  S  G  R  P  S  L  L  S  L  L  L  R  K  I  I  I  Q  S  F  S  S  L  D  L  L  I  M  F  H  Q  :  G  Q  L  *  I  T  K  F  V  I  Q  G  T  M  T  S  I  C  A  P  M  L  E  *  L :   V  R  L  D  L  H  I  T  M  C  C  W  M  K  L  V  S  H  L  M  N  F  K  N  L  F  I  I  C  P  M   : C  T  K  E  A  L  L  L  Y  P  L  :  W  L  R  *  V  M  P  I  W  P  P  H  R  W  V  N  G  *  N  S  R  M  H  Q  R  H  R  Q  A  M  V  V  *  L  M  L  V  Q  L  L  F  L  N  C  P  V  F  R  R  T  L  L  A  P  C  S  S  V  E  A  C  A  P  P  P  V  L  L  Y  A  V  N  V  C  S  R  Q  M  V  S  V  N  S  S  S  L  T  A  L  G  V  R  T  L  S  *  *  P  P  K  N  N  L  V  M  R  Y  N  T  R  S  V  A  I  F  R  S  H  A  Y  F  S  R  F  C  S  P  E  Q  F  C  Y  V  S  V  K  C  I  E  I  N  L  V  V  *  L  C  I  N  Y  A  F  L  Y  V  N  G  N  I  *  L  V  F  F  P  L  L  L  G  K  L </second_frame>
            <third_frame>   Y  T  Q  F  F  K  E  F  H  F  I  R  L  L  C  Q  V  V  S  S  R  Q  W  P  S  I  S  R  Y  R  A  S  V  R  T  Q  S  P  K  V  E  M  I  D  N  I  F  K  K  V  S  D  T  D  D  D  G  I  M  R :   E  L  L  L  D  F  Y  V  S  S  G  K  R  K  P  E  H  I  I  V  F  R  *  S  N  P  A  C  S  P  F  C  F  Q  Q  I  I  Y  I  L  S  A  I  A  L  L  L  T  L  H  L  *  *  M  S  K  S  S  E  I  F  I  E  H  D  I  G  E  F  L  W  F  Y  L  I  F  C  H  F  Y  P  V  Y  L  L  F  *  R  I  H  V  A  D  L  T  L  G  H  E  E  *  L  L  I  F  L  L  F  H  R  L  L  L  L  P  L  P  C  V  P  P  A  *  H  C  H  V  A  V  N  F  V  H  F  F  D  G  F  A  I  G  P  F  *  K  C  Q  G  W  C  Q  *  I  S  I  *  S  S  S  K  H  R  T  G  P  A  H  *   : G  L  Q  F  S  R  *  E  V  V  A  Q  V  C  Y  H  C  C  S  E  K  S  S  Y  K  V  F  P  V  W  I  S  *  *  C  S  T  R :   D  N  Y  R  *  Q  S  L  S  S  K  E  Q  *  L  L  S  V  R  P  C  W  N  D   : W  Y  D  S  T  Y  T  L  P  C  V  V  G  *  S  W  F  L  T  *  *  T  S  R  T  C  S  *  S  V  L  C  :  V  P  K  K  H  Y  C  Y  I  H  C :   G  S  D  K  L  C  P  F  G  R  H  T  G  G  S  M  D  E  I  R  G  C  I  R  D  I  V  K  P  W  W  S  D  *  C  W  S  S  Y  C  S  S  I  A  P  S  S  G  E  R  C  *  L  H  V  L  L  L  R  P  V  H  H  L  L  F  Y  S  T  R  L  M  Y  A  L  D  K  W  F  L  *  I  A  L  V  *  Q  H  L  E  Y  E  P  C  P  S  D  L  P  K  T  T  *  L  C  G  T  I  L  G  L  L  P  Y  S  G  L  M  H  I  F  R  A  S  V  L  L  N  N  F  A  M  Y  L  *  N  A  *  R  L  T  W  W  C  D  Y  A  S  I  M  L  F  Y  M  *  M  V  I  Y  N  L  F  F  S  R  F  Y  *  G  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="104650" stop="104534"/>
                    <exon start="104445" stop="104334"/>
                    <exon start="104257" stop="104184"/>
                    <exon start="104091" stop="103997"/>
                    <exon start="103893" stop="103862"/>
                    <exon start="103779" stop="103604"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>603</number_coding_nucleotides>
                  <number_encoded_amino_acids>201</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TLYTSLTVLLLAPFENVRDGVSESQFNQVLNIELDQLIEACNFLDEKWSPKFVIIVAQKNHHTKFFQSGSPDNVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVGFSPDELQELVHNLSYVYQRSTTAISIVAPISYAHLAATQVGQWMKFEDASETSSSHGGLTNAGPVTVPQLPRLQENVASSMFFC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="105751" stop="105573"/>
                    <exon start="105039" stop="104970"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YTQFFKEFHFIRLLCQVVSSRQWPSISRYRASVRTQSPKVEMIDNIFKKVSDTDDDGIMRELLLDFYVSSGKRKPEHIIVFR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="103190" PGL_stop="103664"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="103190" e_stop="103225"/>
            <exon e_start="103285" e_stop="103664"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.722"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.722">
            <gDNA_exon_boundary e_start="103190" e_stop="103225" e_length="36"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="103226" i_stop="103284" i_length="59"/>
          </intron>
          <exon e_serial="2" e_score="0.989">
            <gDNA_exon_boundary e_start="103285" e_stop="103664" e_length="380"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103190" stop="103225"/>
              <exon start="103285" stop="103664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369980" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTTGTTTTTTTTGGTTTAGTTAGTTGAAAAAAAT : CGGGAAAAAAACAAGTTATATATTACCATTTACATATAAAAAAGCATAATTGATGCATAGTCACACCACCAGGTTAATCTCTATGCATTTTACAGATACATAGCAAAATTGTTCAGGAGAACAGAAGCGCGAAAAATATGCATGAGACCTGAATATGGCAACAGACCTAGTATTGTACCGCATAACTAAGTTGTTTTTGGGAGGTCACTAGGACAAGGTTCGTACTCCAAGTGCTGTCAAACTAGAGCTATTTACAGAAACCATTTGTCTAGAGCATACATTAACCGCGTAGAGTAAAACAGGAGGTGGTGCACAGGCCTCAACAGAAGAACATGGAGCTAGCAACGTTCTCCTGAAGACGGGGCAATTGAGGAACAGTA</gDNA_template>
            <first_frame> F  L  F  F  L  V  *  L  V  E  K  N  :  R  E  K  N  K  L  Y  I  T  I  Y  I  *  K  S  I  I  D  A  *  S  H  H  Q  V  N  L  Y  A  F  Y  R  Y  I  A  K  L  F  R  R  T  E  A  R  K  I  C  M  R  P  E  Y  G  N  R  P  S  I  V  P  H  N  *  V  V  F  G  R  S  L  G  Q  G  S  Y  S  K  C  C  Q  T  R  A  I  Y  R  N  H  L  S  R  A  Y  I  N  R  V  E  *  N  R  R  W  C  T  G  L  N  R  R  T  W  S  *  Q  R  S  P  E  D  G  A  I  E  E  Q   </first_frame>
            <second_frame>  F  C  F  F  W  F  S  *  L  K  K  I :   G  K  K  T  S  Y  I  L  P  F  T  Y  K  K  A  *  L  M  H  S  H  T  T  R  L  I  S  M  H  F  T  D  T  *  Q  N  C  S  G  E  Q  K  R  E  K  Y  A  *  D  L  N  M  A  T  D  L  V  L  Y  R  I  T  K  L  F  L  G  G  H  *  D  K  V  R  T  P  S  A  V  K  L  E  L  F  T  E  T  I  C  L  E  H  T  L  T  A  *  S  K  T  G  G  G  A  Q  A  S  T  E  E  H  G  A  S  N  V  L  L  K  T  G  Q  L  R  N  S  </second_frame>
            <third_frame>   F  V  F  F  G  L  V  S  *  K  K   : S  G  K  K  Q  V  I  Y  Y  H  L  H  I  K  K  H  N  *  C  I  V  T  P  P  G  *  S  L  C  I  L  Q  I  H  S  K  I  V  Q  E  N  R  S  A  K  N  M  H  E  T  *  I  W  Q  Q  T  *  Y  C  T  A  *  L  S  C  F  W  E  V  T  R  T  R  F  V  L  Q  V  L  S  N  *  S  Y  L  Q  K  P  F  V  *  S  I  H  *  P  R  R  V  K  Q  E  V  V  H  R  P  Q  Q  K  N  M  E  L  A  T  F  S  *  R  R  G  N  *  G  T  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0038F03.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="-" PGL_start="110388" PGL_stop="109527"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="110388" e_stop="110233"/>
            <exon e_start="110108" e_stop="109981"/>
            <exon e_start="109590" e_stop="109527"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.854" acc_prob="0.997" e_score="0.936"/>
          <exon-intron don_prob="0.986" acc_prob="0.944" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.936">
            <gDNA_exon_boundary e_start="110388" e_stop="110233" e_length="156"/>
          </exon>
          <intron i_serial="1" don_prob="0.854" acc_prob="0.997">
            <gDNA_intron_boundary i_start="110232" i_stop="110109" i_length="124"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="110108" e_stop="109981" e_length="128"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.944">
            <gDNA_intron_boundary i_start="109980" i_stop="109591" i_length="390"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="109590" e_stop="109527" e_length="64"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110388" stop="110233"/>
              <exon start="110108" stop="109981"/>
              <exon start="109590" stop="109527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279979" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTATGGTTTTGTTTTAACCAAAAATGTCTGTCTCTCTTCTGAGAAACACTGCGTTTCTTCCCTCAATCTCACTTGGAATTCAAACCATTTCCTCAGCCAAAATGCGAAGAACACGAAGTTCCCTCAACCAAGAAACCCCTTCTCAGAAAAACCCAG : GTTGTGATGGCACAGGTGGAAGCTCCGTTCCTGAACTCCGTGTTTTCATCCGAAGAAAGAGAGTTAAAAAGACTGTGGAAGTCATAGCCAAAGAGGTCAAGGAAGAATCTTCTGGCAAAAAAGTTATG : CTTGTTAGACTGCCTGATATAGAGGATTTTTCCTATTCGAAGGACATTACACATCCCCAGTCAA</gDNA_template>
            <first_frame> L  W  F  C  F  N  Q  K  C  L  S  L  F  *  E  T  L  R  F  F  P  Q  S  H  L  E  F  K  P  F  P  Q  P  K  C  E  E  H  E  V  P  S  T  K  K  P  L  L  R  K  T  Q  :  V  V  M  A  Q  V  E  A  P  F  L  N  S  V  F  S  S  E  E  R  E  L  K  R  L  W  K  S  *  P  K  R  S  R  K  N  L  L  A  K  K  L  C :   L  L  D  C  L  I  *  R  I  F  P  I  R  R  T  L  H  I  P  S  Q </first_frame>
            <second_frame>  Y  G  F  V  L  T  K  N  V  C  L  S  S  E  K  H  C  V  S  S  L  N  L  T  W  N  S  N  H  F  L  S  Q  N  A  K  N  T  K  F  P  Q  P  R  N  P  F  S  E  K  P  R :   L  *  W  H  R  W  K  L  R  S  *  T  P  C  F  H  P  K  K  E  S  *  K  D  C  G  S  H  S  Q  R  G  Q  G  R  I  F  W  Q  K  S  Y   : A  C  *  T  A  *  Y  R  G  F  F  L  F  E  G  H  Y  T  S  P  V   </second_frame>
            <third_frame>   M  V  L  F  *  P  K  M  S  V  S  L  L  R  N  T  A  F  L  P  S  I  S  L  G  I  Q  T  I  S  S  A  K  M  R  R  T  R  S  S  L  N  Q  E  T  P  S  Q  K  N  P   : G  C  D  G  T  G  G  S  S  V  P  E  L  R  V  F  I  R  R  K  R  V  K  K  T  V  E  V  I  A  K  E  V  K  E  E  S  S  G  K  K  V  M  :  L  V  R  L  P  D  I  E  D  F  S  Y  S  K  D  I  T  H  P  Q  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="110371" stop="110233"/>
                    <exon start="110108" stop="109981"/>
                    <exon start="109590" stop="109528"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>330</number_coding_nucleotides>
                  <number_encoded_amino_acids>110</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PKMSVSLLRNTAFLPSISLGIQTISSAKMRRTRSSLNQETPSQKNPGCDGTGGSSVPELRVFIRRKRVKKTVEVIAKEVKEESSGKKVMLVRLPDIEDFSYSKDITHPQS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="+" PGL_start="113630" PGL_stop="117295"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="113630" e_stop="113715"/>
            <exon e_start="115315" e_stop="115440"/>
            <exon e_start="116211" e_stop="116338"/>
            <exon e_start="116861" e_stop="117295"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.968" acc_prob="0.990" e_score="0.964"/>
          <exon-intron don_prob="0.838" acc_prob="0.849" e_score="1.000"/>
          <exon-intron don_prob="0.930" acc_prob="0.999" e_score="0.992"/>
          <exon-only e_score="0.953"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.964">
            <gDNA_exon_boundary e_start="113630" e_stop="113715" e_length="86"/>
          </exon>
          <intron i_serial="1" don_prob="0.968" acc_prob="0.990">
            <gDNA_intron_boundary i_start="113716" i_stop="115314" i_length="1599"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="115315" e_stop="115440" e_length="126"/>
          </exon>
          <intron i_serial="2" don_prob="0.838" acc_prob="0.849">
            <gDNA_intron_boundary i_start="115441" i_stop="116210" i_length="770"/>
          </intron>
          <exon e_serial="3" e_score="0.992">
            <gDNA_exon_boundary e_start="116211" e_stop="116338" e_length="128"/>
          </exon>
          <intron i_serial="3" don_prob="0.930" acc_prob="0.999">
            <gDNA_intron_boundary i_start="116339" i_stop="116860" i_length="522"/>
          </intron>
          <exon e_serial="4" e_score="0.953">
            <gDNA_exon_boundary e_start="116861" e_stop="117295" e_length="435"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113630" stop="113715"/>
              <exon start="115315" stop="115440"/>
              <exon start="116211" stop="116338"/>
              <exon start="116861" stop="116937"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113633" stop="113715"/>
              <exon start="115315" stop="115440"/>
              <exon start="116211" stop="116338"/>
              <exon start="116861" stop="117283"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E692259" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113634" stop="113715"/>
              <exon start="115315" stop="115440"/>
              <exon start="116211" stop="116338"/>
              <exon start="116861" stop="116995"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E463309" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116219" stop="116338"/>
              <exon start="116861" stop="117295"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431096" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116985" stop="117293"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302546" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116985" stop="117293"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302552" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116986" stop="117294"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116991" stop="117294"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302545" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAGCTGGAGGATTTATTGGATGCGTTTGCTGACAGAGTCTCTAAACCTCGCCTCTTTATGACAGACAAGATGCAAATTGCTCTTG : CTGGGGGTTTGGGACATGGTGTGGCTCATGCTGTGTTTTTCTGCCTTGGCCTTTTGACACCTGCATTTGGACCAGCGACATACTATGTAGAGAAATGCTCAAAGATACCCTTTTTTCTTGTTTCTG : CTATTATAGCCCTTGCCTTTGCTACCATCCACACTTTCTCCATGGTTATTGCATTCAGTGGATATGAAGAAGGAAACAAAGTGGACCAGTGTTTCGCTCCTGTTGTTCACTTAATTGCTGGCATGTTG : ACACTGACGAATCTTGCATTTGGAGGCTGCATGATTGGCATTCCACTCCTCTATTGTGTAGCAATCGTGACCTTGGTACATTGCGGAAAGATGGCATGGAGGAGATTGATAGAAAGCCGAAACAGGGAGGGGAACTTCAGCAATAGCCAATAAGCAAGGATAATAACCTTTTTTGTATTACTGAGAAGTGTAAGATTAGTAATTGCCAGATATATCTAATGCTTGGAGCATTTGCCAAGGGTGACTCAAAGAAGAGACTAGTAAATCTTTTGTTTTAGGCCTCCAAAAATATTTCATAGTCAACTTTATATTGGCCAAATAAATATTCGGGCCACTCAAACTTTACATGAATTTTCGTTGTAACACCTAACATTTGCCTTGTACCTATTGAACACCTAATATTACAAGAATTTATGTCTATTCAATAATCGTACC</gDNA_template>
            <first_frame> E  A  G  G  F  I  G  C  V  C  *  Q  S  L  *  T  S  P  L  Y  D  R  Q  D  A  N  C  S  C :   W  G  F  G  T  W  C  G  S  C  C  V  F  L  P  W  P  F  D  T  C  I  W  T  S  D  I  L  C  R  E  M  L  K  D  T  L  F  S  C  F  C :   Y  Y  S  P  C  L  C  Y  H  P  H  F  L  H  G  Y  C  I  Q  W  I  *  R  R  K  Q  S  G  P  V  F  R  S  C  C  S  L  N  C  W  H  V   : D  T  D  E  S  C  I  W  R  L  H  D  W  H  S  T  P  L  L  C  S  N  R  D  L  G  T  L  R  K  D  G  M  E  E  I  D  R  K  P  K  Q  G  G  E  L  Q  Q  *  P  I  S  K  D  N  N  L  F  C  I  T  E  K  C  K  I  S  N  C  Q  I  Y  L  M  L  G  A  F  A  K  G  D  S  K  K  R  L  V  N  L  L  F  *  A  S  K  N  I  S  *  S  T  L  Y  W  P  N  K  Y  S  G  H  S  N  F  T  *  I  F  V  V  T  P  N  I  C  L  V  P  I  E  H  L  I  L  Q  E  F  M  S  I  Q  *  S  Y  </first_frame>
            <second_frame>  K  L  E  D  L  L  D  A  F  A  D  R  V  S  K  P  R  L  F  M  T  D  K  M  Q  I  A  L   : A  G  G  L  G  H  G  V  A  H  A  V  F  F  C  L  G  L  L  T  P  A  F  G  P  A  T  Y  Y  V  E  K  C  S  K  I  P  F  F  L  V  S   : A  I  I  A  L  A  F  A  T  I  H  T  F  S  M  V  I  A  F  S  G  Y  E  E  G  N  K  V  D  Q  C  F  A  P  V  V  H  L  I  A  G  M  L  :  T  L  T  N  L  A  F  G  G  C  M  I  G  I  P  L  L  Y  C  V  A  I  V  T  L  V  H  C  G  K  M  A  W  R  R  L  I  E  S  R  N  R  E  G  N  F  S  N  S  Q  *  A  R  I  I  T  F  F  V  L  L  R  S  V  R  L  V  I  A  R  Y  I  *  C  L  E  H  L  P  R  V  T  Q  R  R  D  *  *  I  F  C  F  R  P  P  K  I  F  H  S  Q  L  Y  I  G  Q  I  N  I  R  A  T  Q  T  L  H  E  F  S  L  *  H  L  T  F  A  L  Y  L  L  N  T  *  Y  Y  K  N  L  C  L  F  N  N  R  T </second_frame>
            <third_frame>   S  W  R  I  Y  W  M  R  L  L  T  E  S  L  N  L  A  S  L  *  Q  T  R  C  K  L  L  L  :  L  G  V  W  D  M  V  W  L  M  L  C  F  S  A  L  A  F  *  H  L  H  L  D  Q  R  H  T  M  *  R  N  A  Q  R  Y  P  F  F  L  F  L  :  L  L  *  P  L  P  L  L  P  S  T  L  S  P  W  L  L  H  S  V  D  M  K  K  E  T  K  W  T  S  V  S  L  L  L  F  T  *  L  L  A  C  * :   H  *  R  I  L  H  L  E  A  A  *  L  A  F  H  S  S  I  V  *  Q  S  *  P  W  Y  I  A  E  R  W  H  G  G  D  *  *  K  A  E  T  G  R  G  T  S  A  I  A  N  K  Q  G  *  *  P  F  L  Y  Y  *  E  V  *  D  *  *  L  P  D  I  S  N  A  W  S  I  C  Q  G  *  L  K  E  E  T  S  K  S  F  V  L  G  L  Q  K  Y  F  I  V  N  F  I  L  A  K  *  I  F  G  P  L  K  L  Y  M  N  F  R  C  N  T  *  H  L  P  C  T  Y  *  T  P  N  I  T  R  I  Y  V  Y  S  I  I  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="113631" stop="113715"/>
                    <exon start="115315" stop="115440"/>
                    <exon start="116211" stop="116338"/>
                    <exon start="116861" stop="117013"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>489</number_coding_nucleotides>
                  <number_encoded_amino_acids>163</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLEDLLDAFADRVSKPRLFMTDKMQIALAGGLGHGVAHAVFFCLGLLTPAFGPATYYVEKCSKIPFFLVSAIIALAFATIHTFSMVIAFSGYEEGNKVDQCFAPVVHLIAGMLTLTNLAFGGCMIGIPLLYCVAIVTLVHCGKMAWRRLIESRNREGNFSNSQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="+" PGL_start="124023" PGL_stop="124493"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="124023" e_stop="124493"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="124023" e_stop="124493" e_length="471"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="124023" stop="124493"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324058" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="124117" stop="124405"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201320" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGCTTTAATGAATGCCATGGGTACTGTAGTGGGAATTTACCTCATTGATCACTTTGGACGCAAAAAGTTGGCATTGACAAGCTTATCCGGTGTAATTGTGTCCTTGATTCTCCTAGCTGTAGCATTTTTCTTAGAGTCATCTACTTCAGGCAATGTTGGGGCTTATGGGTGGATTGCTGTAATAGGCTTAGCCCTCTATATTGCTTTCTTTGCACCTGGTATGGGTCCTGTCCCATGGACAGTGAACTCAGAAATATACCCAGAGTCCTACAGAGGAATGTGTGGTGGCATGTCTGCTACTGTCAACTGGATATCAAATCTTATAGTGGCCCAGAGTTTCCTATCCTTAGCCGAGGCTGTGGGCACAGGTGTTACTTTCTTGATACTAGCTGGTATAGCAGTGATGGCATTTGTGTTTGTCGCCGTGTTCGTGCCAGAGACCAAGGGCTTGTCATTTGAGGAAATGGAGA</gDNA_template>
            <first_frame> L  L  *  *  M  P  W  V  L  *  W  E  F  T  S  L  I  T  L  D  A  K  S  W  H  *  Q  A  Y  P  V  *  L  C  P  *  F  S  *  L  *  H  F  S  *  S  H  L  L  Q  A  M  L  G  L  M  G  G  L  L  *  *  A  *  P  S  I  L  L  S  L  H  L  V  W  V  L  S  H  G  Q  *  T  Q  K  Y  T  Q  S  P  T  E  E  C  V  V  A  C  L  L  L  S  T  G  Y  Q  I  L  *  W  P  R  V  S  Y  P  *  P  R  L  W  A  Q  V  L  L  S  *  Y  *  L  V  *  Q  *  W  H  L  C  L  S  P  C  S  C  Q  R  P  R  A  C  H  L  R  K  W  R </first_frame>
            <second_frame>  C  F  N  E  C  H  G  Y  C  S  G  N  L  P  H  *  S  L  W  T  Q  K  V  G  I  D  K  L  I  R  C  N  C  V  L  D  S  P  S  C  S  I  F  L  R  V  I  Y  F  R  Q  C  W  G  L  W  V  D  C  C  N  R  L  S  P  L  Y  C  F  L  C  T  W  Y  G  S  C  P  M  D  S  E  L  R  N  I  P  R  V  L  Q  R  N  V  W  W  H  V  C  Y  C  Q  L  D  I  K  S  Y  S  G  P  E  F  P  I  L  S  R  G  C  G  H  R  C  Y  F  L  D  T  S  W  Y  S  S  D  G  I  C  V  C  R  R  V  R  A  R  D  Q  G  L  V  I  *  G  N  G   </second_frame>
            <third_frame>   A  L  M  N  A  M  G  T  V  V  G  I  Y  L  I  D  H  F  G  R  K  K  L  A  L  T  S  L  S  G  V  I  V  S  L  I  L  L  A  V  A  F  F  L  E  S  S  T  S  G  N  V  G  A  Y  G  W  I  A  V  I  G  L  A  L  Y  I  A  F  F  A  P  G  M  G  P  V  P  W  T  V  N  S  E  I  Y  P  E  S  Y  R  G  M  C  G  G  M  S  A  T  V  N  W  I  S  N  L  I  V  A  Q  S  F  L  S  L  A  E  A  V  G  T  G  V  T  F  L  I  L  A  G  I  A  V  M  A  F  V  F  V  A  V  F  V  P  E  T  K  G  L  S  F  E  E  M  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="124025" stop="124492"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>468</number_coding_nucleotides>
                  <number_encoded_amino_acids>156</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ALMNAMGTVVGIYLIDHFGRKKLALTSLSGVIVSLILLAVAFFLESSTSGNVGAYGWIAVIGLALYIAFFAPGMGPVPWTVNSEIYPESYRGMCGGMSATVNWISNLIVAQSFLSLAEAVGTGVTFLILAGIAVMAFVFVAVFVPETKGLSFEEME</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="124072" stop="124482"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>408</number_coding_nucleotides>
                  <number_encoded_amino_acids>136</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLWTQKVGIDKLIRCNCVLDSPSCSIFLRVIYFRQCWGLWVDCCNRLSPLYCFLCTWYGSCPMDSELRNIPRVLQRNVWWHVCYCQLDIKSYSGPEFPILSRGCGHRCYFLDTSWYSSDGICVCRRVRARDQGLVI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="+" PGL_start="124540" PGL_stop="124960"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="124540" e_stop="124960"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="124540" e_stop="124960" e_length="421"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="124540" stop="124960"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202645" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACTTCTTGAATCAAGAAGCTAGTCTAAAAGAATCTTATGGCATCTTCATTGTCAGGTGGTGTGTGGTACACCGACATCAATACTCAGTGAAAATTAACAAGTATATTATGTGTACGCACCTTTACCTCTACCTTTGTTGTACCACCTTGTATATTATGGATCAATGCAATGTAATGTGGTTGAGGGGAATTTTGCAACTGCGTTTATTAAAGCTTTGGTTGCAAGTTCCCCAATCGATGTGATAGGTCCTCTAGTAGTACTAGTCTTTCTTCTTTTTTTTTTGTATCAAAGCTGGTGAAGGTCTAGGAAAACATTGAACGACTTTGCTCTAGACTTTTTGAGCTTAATTGTATTATTATCTAATTAATTAAAAAAATTGTTTGGACGCAATTATATTTTATATACAGAGTATTTTAATATT</gDNA_template>
            <first_frame> T  S  *  I  K  K  L  V  *  K  N  L  M  A  S  S  L  S  G  G  V  W  Y  T  D  I  N  T  Q  *  K  L  T  S  I  L  C  V  R  T  F  T  S  T  F  V  V  P  P  C  I  L  W  I  N  A  M  *  C  G  *  G  E  F  C  N  C  V  Y  *  S  F  G  C  K  F  P  N  R  C  D  R  S  S  S  S  T  S  L  S  S  F  F  F  V  S  K  L  V  K  V  *  E  N  I  E  R  L  C  S  R  L  F  E  L  N  C  I  I  I  *  L  I  K  K  I  V  W  T  Q  L  Y  F  I  Y  R  V  F  *  Y  </first_frame>
            <second_frame>  L  L  E  S  R  S  *  S  K  R  I  L  W  H  L  H  C  Q  V  V  C  G  T  P  T  S  I  L  S  E  N  *  Q  V  Y  Y  V  Y  A  P  L  P  L  P  L  L  Y  H  L  V  Y  Y  G  S  M  Q  C  N  V  V  E  G  N  F  A  T  A  F  I  K  A  L  V  A  S  S  P  I  D  V  I  G  P  L  V  V  L  V  F  L  L  F  F  L  Y  Q  S  W  *  R  S  R  K  T  L  N  D  F  A  L  D  F  L  S  L  I  V  L  L  S  N  *  L  K  K  L  F  G  R  N  Y  I  L  Y  T  E  Y  F  N  I </second_frame>
            <third_frame>   F  L  N  Q  E  A  S  L  K  E  S  Y  G  I  F  I  V  R  W  C  V  V  H  R  H  Q  Y  S  V  K  I  N  K  Y  I  M  C  T  H  L  Y  L  Y  L  C  C  T  T  L  Y  I  M  D  Q  C  N  V  M  W  L  R  G  I  L  Q  L  R  L  L  K  L  W  L  Q  V  P  Q  S  M  *  *  V  L  *  *  Y  *  S  F  F  F  F  F  C  I  K  A  G  E  G  L  G  K  H  *  T  T  L  L  *  T  F  *  A  *  L  Y  Y  Y  L  I  N  *  K  N  C  L  D  A  I  I  F  Y  I  Q  S  I  L  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="124542" stop="124781"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLNQEASLKESYGIFIVRWCVVHRHQYSVKINKYIMCTHLYLYLCCTTLYIMDQCNVMWLRGILQLRLLKLWLQVPQSM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="124637" stop="124837"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QVYYVYAPLPLPLLYHLVYYGSMQCNVVEGNFATAFIKALVASSPIDVIGPLVVLVFLLFFLYQSW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="24" PGL_strand="+" PGL_start="125484" PGL_stop="137412"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="125486" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127237"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="0.881"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125486" e_stop="125636" e_length="151"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="0.881">
            <gDNA_exon_boundary e_start="126927" e_stop="127237" e_length="311"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125486" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220076" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125505" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726603" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125506" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712446" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623363" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623364" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610322" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125509" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127164"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348366" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127168"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310192" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458143" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461874" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611680" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586177" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127179"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351140" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356199" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127149"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353876" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308609" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238061" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127164"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391205" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558083" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357574" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127161"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312660" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125518" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127237"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E696029" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E596873" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125520" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127181"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540660" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125520" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127181"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540663" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125520" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716202" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125521" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127181"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290251" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125521" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127171"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744792" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125521" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295402" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125521" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357949" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568664" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734367" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127132"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342937" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586744" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296926" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290821" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286649" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562593" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125532" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127179"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214257" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125538" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303136" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397225" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397137" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397340" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125540" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125548" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215176" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125550" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228932" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125550" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127158"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215464" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125555" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228836" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125559" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344490" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125562" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723764" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125563" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355017" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125613" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551558" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222206" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126956" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340814" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAAATCATCCCTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAG</gDNA_template>
            <first_frame> Q  N  H  P  S  L  *  T  K  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  Y  F  V  L  Y  I  P  N  F  *  I  F  K  F  N  L  H  *  Y  F  S  V  C  L  N  I  Y  Q  S  L  P  I  H  E  I  S  *  L  </first_frame>
            <second_frame>  K  I  I  P  H  C  E  Q  S  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  I  L  F  Y  T  F  L  I  F  R  F  S  S  S  T  Y  I  D  I  S  L  Y  V  *  I  S  I  S  P  C  Q  Y  M  R  F  H  N  * </second_frame>
            <third_frame>   K  S  S  L  I  V  N  K  V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  F  C  S  I  H  S  *  F  L  D  F  Q  V  Q  L  T  L  I  F  L  C  M  S  E  Y  L  S  V  P  A  N  T  *  D  F  I  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125488" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSSLIVNKVSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
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                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
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          </exon_coordinates>
        </AGS_line>
        <SCR_line>
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          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.750"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125486" e_stop="125636" e_length="151"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
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          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
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          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127171" e_length="245"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.304">
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          </intron>
          <exon e_serial="4" e_score="0.750">
            <gDNA_exon_boundary e_start="128298" e_stop="128309" e_length="12"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="128310" i_stop="129506" i_length="1197"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="129507" e_stop="129512" e_length="6"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
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            <referenceDNA id="SGN-E220076" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E726603" strand="+"/>
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            <referenceDNA id="SGN-E712446" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E348366" strand="+"/>
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          <PGS_line>
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          <PGS_line>
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            <referenceDNA id="SGN-E457989" strand="+"/>
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          <PGS_line>
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          <PGS_line>
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            <referenceDNA id="SGN-E461874" strand="+"/>
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          <PGS_line>
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          <PGS_line>
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            <referenceDNA id="SGN-E586177" strand="+"/>
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          <PGS_line>
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          <PGS_line>
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          <PGS_line>
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            <referenceDNA id="SGN-E356199" strand="+"/>
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          <PGS_line>
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          <PGS_line>
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          <PGS_line>
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          <PGS_line>
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          <PGS_line>
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              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286649" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562593" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125538" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303136" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397225" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397137" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397340" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125540" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125548" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215176" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125550" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228932" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125550" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127158"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215464" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125555" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228836" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125559" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344490" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125562" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723764" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125563" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355017" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125613" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551558" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222206" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126956" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340814" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAAATCATCCCTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTAC : AGGAAAAAAATA : AAAAAA</gDNA_template>
            <first_frame> Q  N  H  P  S  L  *  T  K  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  Y  F  V  L  Y  I  P  N  F  *  I  F  K  F  N  L   : Q  E  K  N   : K  K  </first_frame>
            <second_frame>  K  I  I  P  H  C  E  Q  S  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  I  L  F  Y  T  F  L  I  F  R  F  S  S  S  T  Y  :  R  K  K  I  :  K  K </second_frame>
            <third_frame>   K  S  S  L  I  V  N  K  V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  F  C  S  I  H  S  *  F  L  D  F  Q  V  Q  L  T :   G  K  K  * :   K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125488" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSSLIVNKVSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="125486" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127175"/>
            <exon e_start="128298" e_stop="128309"/>
            <exon e_start="130301" e_stop="130321"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.750"/>
          <exon-only e_score="0.857"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125486" e_stop="125636" e_length="151"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127175" e_length="249"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.304">
            <gDNA_intron_boundary i_start="127176" i_stop="128297" i_length="1122"/>
          </intron>
          <exon e_serial="4" e_score="0.750">
            <gDNA_exon_boundary e_start="128298" e_stop="128309" e_length="12"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="128310" i_stop="130300" i_length="1991"/>
          </intron>
          <exon e_serial="5" e_score="0.857">
            <gDNA_exon_boundary e_start="130301" e_stop="130321" e_length="21"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125486" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220076" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125505" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726603" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125506" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712446" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623363" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623364" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610322" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125509" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127164"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348366" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127168"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310192" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458143" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461874" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611680" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586177" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356199" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127149"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353876" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308609" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238061" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127164"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391205" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558083" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357574" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127161"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312660" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125518" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E596873" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125520" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716202" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125521" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127171"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744792" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125521" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295402" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125521" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357949" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127175"/>
              <exon start="128298" stop="128309"/>
              <exon start="130301" stop="130321"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732728" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568664" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734367" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127132"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342937" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586744" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296926" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290821" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286649" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562593" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125538" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303136" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397225" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397137" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397340" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125540" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125548" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215176" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125550" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228932" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125550" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127158"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215464" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125555" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228836" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125559" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344490" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125562" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723764" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125563" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355017" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125613" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551558" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222206" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126956" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340814" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAAATCATCCCTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTG : AGGAAAAAAATA : ATAAAAAAAAACAAAAAAATA</gDNA_template>
            <first_frame> Q  N  H  P  S  L  *  T  K  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  Y  F  V  L  Y  I  P  N  F  *  I  F  K  F  N  L  H  * :   G  K  K  * :   *  K  K  T  K  K   </first_frame>
            <second_frame>  K  I  I  P  H  C  E  Q  S  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  I  L  F  Y  T  F  L  I  F  R  F  S  S  S  T  Y  I   : E  E  K  N   : N  K  K  K  Q  K  N  </second_frame>
            <third_frame>   K  S  S  L  I  V  N  K  V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  F  C  S  I  H  S  *  F  L  D  F  Q  V  Q  L  T  L  :  R  K  K  I  :  I  K  K  N  K  K  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125488" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSSLIVNKVSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="125486" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127171"/>
            <exon e_start="128298" e_stop="128309"/>
            <exon e_start="137306" e_stop="137375"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.750"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125486" e_stop="125636" e_length="151"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127171" e_length="245"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.304">
            <gDNA_intron_boundary i_start="127172" i_stop="128297" i_length="1126"/>
          </intron>
          <exon e_serial="4" e_score="0.750">
            <gDNA_exon_boundary e_start="128298" e_stop="128309" e_length="12"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="128310" i_stop="137305" i_length="8996"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="137306" e_stop="137375" e_length="70"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125486" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220076" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125505" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726603" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125506" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712446" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623363" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623364" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610322" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125509" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127164"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348366" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127171"/>
              <exon start="128298" stop="128309"/>
              <exon start="137306" stop="137375"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706132" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127168"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310192" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458143" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461874" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611680" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586177" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356199" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127149"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353876" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308609" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238061" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127164"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391205" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558083" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357574" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127161"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312660" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125518" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E596873" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125520" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716202" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125521" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127171"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744792" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125521" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295402" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125521" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357949" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568664" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734367" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127132"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342937" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586744" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296926" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290821" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286649" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562593" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125538" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303136" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397225" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397137" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397340" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125540" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125548" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215176" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125550" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228932" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125550" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127158"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215464" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125555" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228836" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125559" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344490" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125562" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723764" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125563" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355017" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125613" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551558" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222206" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126956" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340814" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAAATCATCCCTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTAC : AGGAAAAAAATA : ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</gDNA_template>
            <first_frame> Q  N  H  P  S  L  *  T  K  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  Y  F  V  L  Y  I  P  N  F  *  I  F  K  F  N  L   : Q  E  K  N   : N  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F   </first_frame>
            <second_frame>  K  I  I  P  H  C  E  Q  S  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  I  L  F  Y  T  F  L  I  F  R  F  S  S  S  T  Y  :  R  K  K  I  :  I  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  </second_frame>
            <third_frame>   K  S  S  L  I  V  N  K  V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  F  C  S  I  H  S  *  F  L  D  F  Q  V  Q  L  T :   G  K  K  * :   F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125488" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSSLIVNKVSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="125486" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127170"/>
            <exon e_start="128298" e_stop="128309"/>
            <exon e_start="130303" e_stop="130326"/>
            <exon e_start="130575" e_stop="130604"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.750"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.708"/>
          <exon-only e_score="0.733"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125486" e_stop="125636" e_length="151"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127170" e_length="244"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.304">
            <gDNA_intron_boundary i_start="127171" i_stop="128297" i_length="1127"/>
          </intron>
          <exon e_serial="4" e_score="0.750">
            <gDNA_exon_boundary e_start="128298" e_stop="128309" e_length="12"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="128310" i_stop="130302" i_length="1993"/>
          </intron>
          <exon e_serial="5" e_score="0.708">
            <gDNA_exon_boundary e_start="130303" e_stop="130326" e_length="24"/>
          </exon>
          <intron i_serial="5" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="130327" i_stop="130574" i_length="248"/>
          </intron>
          <exon e_serial="6" e_score="0.733">
            <gDNA_exon_boundary e_start="130575" e_stop="130604" e_length="30"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125486" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220076" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125499" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127170"/>
              <exon start="128298" stop="128309"/>
              <exon start="130303" stop="130326"/>
              <exon start="130575" stop="130604"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E718466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125505" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726603" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125506" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712446" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623363" strand="+"/>
          </PGS_line>
          <PGS_line>
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            <gDNA_exon_coordinates>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126956" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340814" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="5" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAAATCATCCCTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTA : AGGAAAAAAATA : AAAAAAAAACAAAAAAATATGTTG : AAAATTTAAAATAAAAATGAAAAAATCAAA</gDNA_template>
            <first_frame> Q  N  H  P  S  L  *  T  K  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  Y  F  V  L  Y  I  P  N  F  *  I  F  K  F  N  L  :  R  K  K  I  :  K  K  K  Q  K  N  M  L  :  K  I  *  N  K  N  E  K  I  K </first_frame>
            <second_frame>  K  I  I  P  H  C  E  Q  S  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  I  L  F  Y  T  F  L  I  F  R  F  S  S  S  T  * :   G  K  K  * :   K  K  N  K  K  I  C  * :   K  F  K  I  K  M  K  K  S   </second_frame>
            <third_frame>   K  S  S  L  I  V  N  K  V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  F  C  S  I  H  S  *  F  L  D  F  Q  V  Q  L   : K  E  K  N   : K  K  K  T  K  K  Y  V   : E  N  L  K  *  K  *  K  N  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125488" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSSLIVNKVSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="5" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="125486" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127160"/>
            <exon e_start="127955" e_stop="127969"/>
            <exon e_start="128298" e_stop="128309"/>
            <exon e_start="128530" e_stop="128556"/>
            <exon e_start="128695" e_stop="128718"/>
            <exon e_start="129502" e_stop="129570"/>
            <exon e_start="130259" e_stop="130286"/>
            <exon e_start="131212" e_stop="131235"/>
            <exon e_start="132037" e_stop="132065"/>
            <exon e_start="137294" e_stop="137403"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="0.867"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.750"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.667"/>
          <exon-intron don_prob="0.424" acc_prob="0.000" e_score="0.708"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.551"/>
          <exon-intron don_prob="0.901" acc_prob="0.738" e_score="0.536"/>
          <exon-intron don_prob="0.900" acc_prob="0.839" e_score="0.542"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.552"/>
          <exon-only e_score="0.615"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125486" e_stop="125636" e_length="151"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127160" e_length="234"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="127161" i_stop="127954" i_length="794"/>
          </intron>
          <exon e_serial="4" e_score="0.867">
            <gDNA_exon_boundary e_start="127955" e_stop="127969" e_length="15"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.304">
            <gDNA_intron_boundary i_start="127970" i_stop="128297" i_length="328"/>
          </intron>
          <exon e_serial="5" e_score="0.750">
            <gDNA_exon_boundary e_start="128298" e_stop="128309" e_length="12"/>
          </exon>
          <intron i_serial="5" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="128310" i_stop="128529" i_length="220"/>
          </intron>
          <exon e_serial="6" e_score="0.667">
            <gDNA_exon_boundary e_start="128530" e_stop="128556" e_length="27"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="128557" i_stop="128694" i_length="138"/>
          </intron>
          <exon e_serial="7" e_score="0.708">
            <gDNA_exon_boundary e_start="128695" e_stop="128718" e_length="24"/>
          </exon>
          <intron i_serial="7" don_prob="0.424" acc_prob="0.000">
            <gDNA_intron_boundary i_start="128719" i_stop="129501" i_length="783"/>
          </intron>
          <exon e_serial="8" e_score="0.551">
            <gDNA_exon_boundary e_start="129502" e_stop="129570" e_length="69"/>
          </exon>
          <intron i_serial="8" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="129571" i_stop="130258" i_length="688"/>
          </intron>
          <exon e_serial="9" e_score="0.536">
            <gDNA_exon_boundary e_start="130259" e_stop="130286" e_length="28"/>
          </exon>
          <intron i_serial="9" don_prob="0.901" acc_prob="0.738">
            <gDNA_intron_boundary i_start="130287" i_stop="131211" i_length="925"/>
          </intron>
          <exon e_serial="10" e_score="0.542">
            <gDNA_exon_boundary e_start="131212" e_stop="131235" e_length="24"/>
          </exon>
          <intron i_serial="10" don_prob="0.900" acc_prob="0.839">
            <gDNA_intron_boundary i_start="131236" i_stop="132036" i_length="801"/>
          </intron>
          <exon e_serial="11" e_score="0.552">
            <gDNA_exon_boundary e_start="132037" e_stop="132065" e_length="29"/>
          </exon>
          <intron i_serial="11" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="132066" i_stop="137293" i_length="5228"/>
          </intron>
          <exon e_serial="12" e_score="0.615">
            <gDNA_exon_boundary e_start="137294" e_stop="137403" e_length="110"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125486" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220076" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125505" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726603" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125506" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712446" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623363" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623364" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610322" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458143" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461874" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611680" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586177" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356199" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127149"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353876" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308609" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238061" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558083" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125518" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E596873" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125520" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716202" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125521" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295402" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125521" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357949" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568664" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734367" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127132"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342937" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586744" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296926" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290821" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286649" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562593" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125538" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303136" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125548" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215176" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125550" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228932" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125550" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127158"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215464" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125555" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228836" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125559" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344490" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125562" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723764" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125563" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355017" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125613" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551558" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222206" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126666" stop="126747"/>
              <exon start="126927" stop="127160"/>
              <exon start="127955" stop="127969"/>
              <exon start="128298" stop="128309"/>
              <exon start="128530" stop="128556"/>
              <exon start="128695" stop="128718"/>
              <exon start="129502" stop="129570"/>
              <exon start="130259" stop="130286"/>
              <exon start="131212" stop="131235"/>
              <exon start="132037" stop="132065"/>
              <exon start="137294" stop="137403"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354244" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126956" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340814" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="6" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAAATCATCCCTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAA : AAAGAGAAAAAAAAA : AGGAAAAAAATA : AAAACCATAACTGAGAAGTTCCCTTCC : TTATTGTCAAATAATTAATCGAAG : CATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAA : TTTTGGAGGATAAAAACCAATTCATGAG : TAACGAAAAACATTGAGATAGTCG : AAAACAGGTCCTTTAATGGGCCAGGGACC : ATTCTAATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</gDNA_template>
            <first_frame> Q  N  H  P  S  L  *  T  K  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  Y  F  V  L  Y  I  P  N  F  *  I  F  K :   K  R  K  K  K :   G  K  K  * :   K  P  *  L  R  S  S  L  P :   Y  C  Q  I  I  N  R  S :   I  E  K  M  *  I  *  L  F  L  R  L  N  N  *  Y  H  S  V  N  F  *  N :   F  G  G  *  K  P  I  H  E  :  *  R  K  T  L  R  *  S  :  K  T  G  P  L  M  G  Q  G  P :   F  *  Y  I  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  </first_frame>
            <second_frame>  K  I  I  P  H  C  E  Q  S  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  I  L  F  Y  T  F  L  I  F  R  F  S   : K  R  E  K  K   : K  E  K  N   : K  N  H  N  *  E  V  P  F   : L  I  V  K  *  L  I  E   : A  *  K  K  C  K  F  D  Y  F  Y  D  *  I  I  D  I  T  A  L  I  F  R   : I  L  E  D  K  N  Q  F  M  S :   N  E  K  H  *  D  S  R :   K  Q  V  L  *  W  A  R  D   : H  S  N  I  Y  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F </second_frame>
            <third_frame>   K  S  S  L  I  V  N  K  V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  F  C  S  I  H  S  *  F  L  D  F  Q  :  K  E  K  K  K  :  R  K  K  I  :  K  T  I  T  E  K  F  P  S  :  L  L  S  N  N  *  S  K  :  H  R  K  N  V  N  L  T  I  F  T  I  K  *  L  I  S  Q  R  *  F  L  E  :  F  W  R  I  K  T  N  S  *   : V  T  K  N  I  E  I  V   : E  N  R  S  F  N  G  P  G  T  :  I  L  I  Y  I  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125488" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSSLIVNKVSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="6" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="7">
          <exon_coordinates>
            <exon e_start="125486" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127160"/>
            <exon e_start="128298" e_stop="128309"/>
            <exon e_start="128596" e_stop="128601"/>
            <exon e_start="130304" e_stop="130326"/>
            <exon e_start="130451" e_stop="130456"/>
            <exon e_start="131212" e_stop="131235"/>
            <exon e_start="132037" e_stop="132043"/>
            <exon e_start="135714" e_stop="135769"/>
            <exon e_start="137333" e_stop="137412"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.750"/>
          <exon-intron don_prob="0.708" acc_prob="0.000" e_score="0.833"/>
          <exon-intron don_prob="0.900" acc_prob="0.616" e_score="0.739"/>
          <exon-intron don_prob="0.000" acc_prob="0.738" e_score="0.833"/>
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            <referenceDNA id="SGN-E228836" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125559" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344490" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125562" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723764" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125563" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355017" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125613" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551558" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222206" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126666" stop="126747"/>
              <exon start="126927" stop="127160"/>
              <exon start="128298" stop="128309"/>
              <exon start="128596" stop="128601"/>
              <exon start="130304" stop="130326"/>
              <exon start="130451" stop="130456"/>
              <exon start="131212" stop="131235"/>
              <exon start="132037" stop="132043"/>
              <exon start="135714" stop="135769"/>
              <exon start="137333" stop="137412"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357053" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126956" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340814" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="7" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAAATCATCCCTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAA : AGGAAAAAAATA : AAATAA : AAAAAAAACAAAAAAATATGTTG : TATTAT : TAACGAAAAACATTGAGATAGTCG : AAAACAG : AAAGAAAAATAAAATACATAAGTAATCAGTATGAGTTTATGGGTTTTATTTATTTT : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGG</gDNA_template>
            <first_frame> Q  N  H  P  S  L  *  T  K  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  Y  F  V  L  Y  I  P  N  F  *  I  F  K :   G  K  K  * :   N  K :   K  K  T  K  K  Y  V   : V  L   : L  T  K  N  I  E  I  V   : E  N  R :   K  K  N  K  I  H  K  *  S  V  *  V  Y  G  F  Y  L  F   : F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  W </first_frame>
            <second_frame>  K  I  I  P  H  C  E  Q  S  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  I  L  F  Y  T  F  L  I  F  R  F  S   : K  E  K  N   : K  I   : K  K  K  Q  K  N  M  L  :  Y  Y  :  *  R  K  T  L  R  *  S  :  K  T   : E  R  K  I  K  Y  I  S  N  Q  Y  E  F  M  G  F  I  Y  F  :  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F   </second_frame>
            <third_frame>   K  S  S  L  I  V  N  K  V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  F  C  S  I  H  S  *  F  L  D  F  Q  :  R  K  K  I  :  K  *  :  K  K  N  K  K  I  C  C :   I  I :   N  E  K  H  *  D  S  R :   K  Q  :  K  E  K  *  N  T  *  V  I  S  M  S  L  W  V  L  F  I  F :   F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="7" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125488" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSSLIVNKVSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="7" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="8">
          <exon_coordinates>
            <exon e_start="125486" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127160"/>
            <exon e_start="128298" e_stop="128309"/>
            <exon e_start="130582" e_stop="130607"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.750"/>
          <exon-only e_score="0.731"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125486" e_stop="125636" e_length="151"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127160" e_length="234"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.304">
            <gDNA_intron_boundary i_start="127161" i_stop="128297" i_length="1137"/>
          </intron>
          <exon e_serial="4" e_score="0.750">
            <gDNA_exon_boundary e_start="128298" e_stop="128309" e_length="12"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="128310" i_stop="130581" i_length="2272"/>
          </intron>
          <exon e_serial="5" e_score="0.731">
            <gDNA_exon_boundary e_start="130582" e_stop="130607" e_length="26"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125486" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220076" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125497" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
              <exon start="128298" stop="128309"/>
              <exon start="130582" stop="130607"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E721453" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125505" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726603" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125506" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712446" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623363" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623364" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610322" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458143" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461874" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611680" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586177" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356199" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127149"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353876" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308609" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238061" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558083" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125518" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E596873" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125520" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716202" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125521" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295402" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125521" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357949" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568664" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734367" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127132"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342937" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586744" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296926" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290821" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286649" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562593" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125538" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303136" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125548" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215176" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125550" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228932" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125550" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127158"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215464" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125555" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228836" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125559" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344490" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125562" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723764" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125563" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355017" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125613" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551558" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222206" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126956" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340814" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="8" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAAATCATCCCTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAA : AGGAAAAAAATA : AAAATAAAAATGAAAAAATCAAATAT</gDNA_template>
            <first_frame> Q  N  H  P  S  L  *  T  K  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  Y  F  V  L  Y  I  P  N  F  *  I  F  K :   G  K  K  * :   K  *  K  *  K  N  Q  I  </first_frame>
            <second_frame>  K  I  I  P  H  C  E  Q  S  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  I  L  F  Y  T  F  L  I  F  R  F  S   : K  E  K  N   : K  N  K  N  E  K  I  K  Y </second_frame>
            <third_frame>   K  S  S  L  I  V  N  K  V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  F  C  S  I  H  S  *  F  L  D  F  Q  :  R  K  K  I  :  K  I  K  M  K  K  S  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="8" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125488" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSSLIVNKVSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="8" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="9">
          <exon_coordinates>
            <exon e_start="125486" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127152"/>
            <exon e_start="128298" e_stop="128309"/>
            <exon e_start="130303" e_stop="130326"/>
            <exon e_start="131212" e_stop="131225"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.750"/>
          <exon-intron don_prob="0.900" acc_prob="0.738" e_score="0.708"/>
          <exon-only e_score="0.500"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125486" e_stop="125636" e_length="151"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127152" e_length="226"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.304">
            <gDNA_intron_boundary i_start="127153" i_stop="128297" i_length="1145"/>
          </intron>
          <exon e_serial="4" e_score="0.750">
            <gDNA_exon_boundary e_start="128298" e_stop="128309" e_length="12"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="128310" i_stop="130302" i_length="1993"/>
          </intron>
          <exon e_serial="5" e_score="0.708">
            <gDNA_exon_boundary e_start="130303" e_stop="130326" e_length="24"/>
          </exon>
          <intron i_serial="5" don_prob="0.900" acc_prob="0.738">
            <gDNA_intron_boundary i_start="130327" i_stop="131211" i_length="885"/>
          </intron>
          <exon e_serial="6" e_score="0.500">
            <gDNA_exon_boundary e_start="131212" e_stop="131225" e_length="14"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125486" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220076" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125499" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
              <exon start="128298" stop="128309"/>
              <exon start="130303" stop="130326"/>
              <exon start="131212" stop="131225"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E724875" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125505" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726603" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125506" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712446" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610322" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458143" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461874" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611680" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586177" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356199" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127149"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353876" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308609" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558083" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125518" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E596873" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125520" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716202" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125521" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295402" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125521" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357949" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568664" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734367" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127132"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586744" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296926" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290821" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286649" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562593" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125538" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303136" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125563" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355017" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125613" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551558" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126956" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340814" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="9" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAAATCATCCCTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAG : AGGAAAAAAATA : AAAAAAAAACAAAAAAATATGTTG : TAACGAAAAACATT</gDNA_template>
            <first_frame> Q  N  H  P  S  L  *  T  K  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  Y  F  V  L  Y  I  P  N  F  *  :  R  K  K  I  :  K  K  K  Q  K  N  M  L  :  *  R  K  T   </first_frame>
            <second_frame>  K  I  I  P  H  C  E  Q  S  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  I  L  F  Y  T  F  L  I  F  R :   G  K  K  * :   K  K  N  K  K  I  C  C :   N  E  K  H  </second_frame>
            <third_frame>   K  S  S  L  I  V  N  K  V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  F  C  S  I  H  S  *  F  L   : E  E  K  N   : K  K  K  T  K  K  Y  V   : V  T  K  N  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="9" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125488" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSSLIVNKVSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="9" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="10">
          <exon_coordinates>
            <exon e_start="125486" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127152"/>
            <exon e_start="128017" e_stop="128068"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.654"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125486" e_stop="125636" e_length="151"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127152" e_length="226"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="127153" i_stop="128016" i_length="864"/>
          </intron>
          <exon e_serial="4" e_score="0.654">
            <gDNA_exon_boundary e_start="128017" e_stop="128068" e_length="52"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125486" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220076" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125497" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
              <exon start="128017" stop="128068"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720949" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125497" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127153"/>
              <exon start="128017" stop="128068"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720952" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125505" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726603" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125506" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712446" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610322" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458143" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461874" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611680" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586177" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356199" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127149"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353876" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308609" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558083" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125518" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E596873" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125520" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716202" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125521" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295402" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125521" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357949" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568664" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734367" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127132"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586744" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296926" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290821" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286649" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562593" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125538" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303136" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125563" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355017" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125613" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551558" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126956" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340814" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="10" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAAATCATCCCTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAG : AAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAA</gDNA_template>
            <first_frame> Q  N  H  P  S  L  *  T  K  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  Y  F  V  L  Y  I  P  N  F  *  :  K  N  *  N  K  K  L  R  I  I  K  G  S  K  N  K  R  </first_frame>
            <second_frame>  K  I  I  P  H  C  E  Q  S  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  I  L  F  Y  T  F  L  I  F  R :   R  I  K  I  K  N  *  E  *  L  R  D  Q  R  I  K  E </second_frame>
            <third_frame>   K  S  S  L  I  V  N  K  V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  F  C  S  I  H  S  *  F  L   : E  E  L  K  *  K  I  K  N  N  *  G  I  K  E  *  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="10" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125488" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSSLIVNKVSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="10" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="11">
          <exon_coordinates>
            <exon e_start="125505" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127150"/>
            <exon e_start="128298" e_stop="128309"/>
            <exon e_start="131212" e_stop="131235"/>
            <exon e_start="131502" e_stop="131531"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.738" e_score="0.750"/>
          <exon-intron don_prob="0.900" acc_prob="0.232" e_score="0.625"/>
          <exon-only e_score="0.667"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125505" e_stop="125636" e_length="132"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127150" e_length="224"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.304">
            <gDNA_intron_boundary i_start="127151" i_stop="128297" i_length="1147"/>
          </intron>
          <exon e_serial="4" e_score="0.750">
            <gDNA_exon_boundary e_start="128298" e_stop="128309" e_length="12"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.738">
            <gDNA_intron_boundary i_start="128310" i_stop="131211" i_length="2902"/>
          </intron>
          <exon e_serial="5" e_score="0.625">
            <gDNA_exon_boundary e_start="131212" e_stop="131235" e_length="24"/>
          </exon>
          <intron i_serial="5" don_prob="0.900" acc_prob="0.232">
            <gDNA_intron_boundary i_start="131236" i_stop="131501" i_length="266"/>
          </intron>
          <exon e_serial="6" e_score="0.667">
            <gDNA_exon_boundary e_start="131502" e_stop="131531" e_length="30"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125505" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726603" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610322" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458143" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461874" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611680" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586177" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127149"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353876" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308609" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558083" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127150"/>
              <exon start="128298" stop="128309"/>
              <exon start="131212" stop="131235"/>
              <exon start="131502" stop="131531"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256526" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125518" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E596873" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125521" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357949" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568664" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734367" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127132"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296926" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290821" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286649" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562593" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125538" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303136" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125563" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355017" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126956" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340814" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="11" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTT : AGGAAAAAAATA : TAACGAAAAACATTGAGATAGTCG : CAAACATAAGCTAAAATTTGCCAGCGTCTC</gDNA_template>
            <first_frame> E  Q  S  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  I  L  F  Y  T  F  L  I  F  :  R  K  K  I  :  *  R  K  T  L  R  *  S  :  Q  T  *  A  K  I  C  Q  R  L </first_frame>
            <second_frame>  N  K  V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  F  C  S  I  H  S  *  F  L :   G  K  K  Y :   N  E  K  H  *  D  S  R :   K  H  K  L  K  F  A  S  V   </second_frame>
            <third_frame>   T  K  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  Y  F  V  L  Y  I  P  N  F   : *  E  K  N   : I  T  K  N  I  E  I  V   : A  N  I  S  *  N  L  P  A  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="11" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125506" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKVSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="11" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="12">
          <exon_coordinates>
            <exon e_start="125505" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127151"/>
            <exon e_start="128298" e_stop="128309"/>
            <exon e_start="136213" e_stop="136219"/>
            <exon e_start="137306" e_stop="137384"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.244" e_score="0.750"/>
          <exon-intron don_prob="0.377" acc_prob="0.000" e_score="0.714"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125505" e_stop="125636" e_length="132"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127151" e_length="225"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.304">
            <gDNA_intron_boundary i_start="127152" i_stop="128297" i_length="1146"/>
          </intron>
          <exon e_serial="4" e_score="0.750">
            <gDNA_exon_boundary e_start="128298" e_stop="128309" e_length="12"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.244">
            <gDNA_intron_boundary i_start="128310" i_stop="136212" i_length="7903"/>
          </intron>
          <exon e_serial="5" e_score="0.714">
            <gDNA_exon_boundary e_start="136213" e_stop="136219" e_length="7"/>
          </exon>
          <intron i_serial="5" don_prob="0.377" acc_prob="0.000">
            <gDNA_intron_boundary i_start="136220" i_stop="137305" i_length="1086"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="137306" e_stop="137384" e_length="79"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125505" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726603" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610322" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458143" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461874" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611680" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586177" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127149"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353876" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308609" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558083" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127151"/>
              <exon start="128298" stop="128309"/>
              <exon start="136213" stop="136219"/>
              <exon start="137306" stop="137384"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253853" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125518" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E596873" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125521" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357949" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568664" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734367" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127132"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296926" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290821" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286649" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562593" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125538" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303136" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125563" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355017" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126956" stop="127146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340814" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="12" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTA : AGGAAAAAAATA : AAACAAG : ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</gDNA_template>
            <first_frame> E  Q  S  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  I  L  F  Y  T  F  L  I  F   : K  E  K  N   : K  T  R :   F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F </first_frame>
            <second_frame>  N  K  V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  F  C  S  I  H  S  *  F  L  :  R  K  K  I  :  K  Q   : D  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F   </second_frame>
            <third_frame>   T  K  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  Y  F  V  L  Y  I  P  N  F  * :   G  K  K  * :   N  K  :  I  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="12" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125506" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKVSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="12" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="13">
          <exon_coordinates>
            <exon e_start="125505" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127144"/>
            <exon e_start="128298" e_stop="128309"/>
            <exon e_start="137306" e_stop="137385"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.750"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125505" e_stop="125636" e_length="132"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127144" e_length="218"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.304">
            <gDNA_intron_boundary i_start="127145" i_stop="128297" i_length="1153"/>
          </intron>
          <exon e_serial="4" e_score="0.750">
            <gDNA_exon_boundary e_start="128298" e_stop="128309" e_length="12"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="128310" i_stop="137305" i_length="8996"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="137306" e_stop="137385" e_length="80"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125505" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726603" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610322" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458143" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461874" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611680" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586177" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308609" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558083" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125518" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E596873" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
              <exon start="128298" stop="128309"/>
              <exon start="137306" stop="137385"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715789" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
              <exon start="128298" stop="128309"/>
              <exon start="137306" stop="137384"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716774" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568664" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734367" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127132"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562593" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125538" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303136" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125563" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355017" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="13" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTA : AGGAAAAAAATA : ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</gDNA_template>
            <first_frame> E  Q  S  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  I  L  F  Y  T  F  L  :  R  K  K  I  :  I  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F   </first_frame>
            <second_frame>  N  K  V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  F  C  S  I  H  S  * :   G  K  K  * :   F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  </second_frame>
            <third_frame>   T  K  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  Y  F  V  L  Y  I  P   : K  E  K  N   : N  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="13" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125506" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKVSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="13" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="14">
          <exon_coordinates>
            <exon e_start="125507" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127140"/>
            <exon e_start="128298" e_stop="128309"/>
            <exon e_start="131212" e_stop="131222"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.738" e_score="0.750"/>
          <exon-only e_score="0.636"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125507" e_stop="125636" e_length="130"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127140" e_length="214"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.304">
            <gDNA_intron_boundary i_start="127141" i_stop="128297" i_length="1157"/>
          </intron>
          <exon e_serial="4" e_score="0.750">
            <gDNA_exon_boundary e_start="128298" e_stop="128309" e_length="12"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.738">
            <gDNA_intron_boundary i_start="128310" i_stop="131211" i_length="2902"/>
          </intron>
          <exon e_serial="5" e_score="0.636">
            <gDNA_exon_boundary e_start="131212" e_stop="131222" e_length="11"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610322" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611680" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586177" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558083" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125518" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E596873" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127132"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562593" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125538" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127140"/>
              <exon start="128298" stop="128309"/>
              <exon start="131212" stop="131222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586966" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="14" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATT : AGGAAAAAAATA : TAACGAAAAAC</gDNA_template>
            <first_frame> T  K  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  Y  F  V  L  Y  I  :  R  K  K  I  :  *  R  K   </first_frame>
            <second_frame>  Q  S  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  I  L  F  Y  T  L :   G  K  K  Y :   N  E  K  </second_frame>
            <third_frame>   K  V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  F  C  S  I  H   : *  E  K  N   : I  T  K  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="14" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="14" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125509" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KVSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="15">
          <exon_coordinates>
            <exon e_start="125496" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127137"/>
            <exon e_start="128298" e_stop="128309"/>
            <exon e_start="129870" e_stop="129896"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.750"/>
          <exon-only e_score="0.667"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125496" e_stop="125636" e_length="141"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127137" e_length="211"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.304">
            <gDNA_intron_boundary i_start="127138" i_stop="128297" i_length="1160"/>
          </intron>
          <exon e_serial="4" e_score="0.750">
            <gDNA_exon_boundary e_start="128298" e_stop="128309" e_length="12"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="128310" i_stop="129869" i_length="1560"/>
          </intron>
          <exon e_serial="5" e_score="0.667">
            <gDNA_exon_boundary e_start="129870" e_stop="129896" e_length="27"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125496" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
              <exon start="128298" stop="128309"/>
              <exon start="129870" stop="129896"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610322" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611680" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586177" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558083" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125518" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E596873" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127132"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562593" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="15" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATAC : AGGAAAAAAATA : ATTAATATAAAATGAAACAAATAAATA</gDNA_template>
            <first_frame> P  H  C  E  Q  S  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  I  L  F  Y  T :   G  K  K  * :   L  I  *  N  E  T  N  K   </first_frame>
            <second_frame>  L  I  V  N  K  V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  F  C  S  I   : Q  E  K  N   : N  *  Y  K  M  K  Q  I  N  </second_frame>
            <third_frame>   S  L  *  T  K  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  Y  F  V  L  Y  :  R  K  K  I  :  I  N  I  K  *  N  K  *  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="15" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125497" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LIVNKVSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="15" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="16">
          <exon_coordinates>
            <exon e_start="125507" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127136"/>
            <exon e_start="137283" e_stop="137388"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.583"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125507" e_stop="125636" e_length="130"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127136" e_length="210"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="127137" i_stop="137282" i_length="10146"/>
          </intron>
          <exon e_serial="4" e_score="0.583">
            <gDNA_exon_boundary e_start="137283" e_stop="137388" e_length="106"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610322" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586177" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127136"/>
              <exon start="137283" stop="137388"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350327" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127132"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125528" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562593" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="16" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATA : AAAAATTAAACATTCTAATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</gDNA_template>
            <first_frame> T  K  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  Y  F  V  L  * :   K  I  K  H  S  N  I  Y  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F </first_frame>
            <second_frame>  Q  S  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  I  L  F  Y   : K  K  L  N  I  L  I  Y  I  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F   </second_frame>
            <third_frame>   K  V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  F  C  S  I  :  K  N  *  T  F  *  Y  I  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="16" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="16" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125509" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KVSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="17">
          <exon_coordinates>
            <exon e_start="125507" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127133"/>
            <exon e_start="128298" e_stop="128309"/>
            <exon e_start="130303" e_stop="130319"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.750"/>
          <exon-only e_score="0.941"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125507" e_stop="125636" e_length="130"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127133" e_length="207"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.304">
            <gDNA_intron_boundary i_start="127134" i_stop="128297" i_length="1164"/>
          </intron>
          <exon e_serial="4" e_score="0.750">
            <gDNA_exon_boundary e_start="128298" e_stop="128309" e_length="12"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="128310" i_stop="130302" i_length="1993"/>
          </intron>
          <exon e_serial="5" e_score="0.941">
            <gDNA_exon_boundary e_start="130303" e_stop="130319" e_length="17"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610322" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586177" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127132"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125563" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
              <exon start="128298" stop="128309"/>
              <exon start="130303" stop="130319"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E718198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="17" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCT : AGGAAAAAAATA : AAAAAAAAACAAAAAAA</gDNA_template>
            <first_frame> T  K  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  Y  F  V  L :   G  K  K  * :   K  K  N  K  K  </first_frame>
            <second_frame>  Q  S  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  I  L  F   : *  E  K  N   : K  K  K  T  K  K </second_frame>
            <third_frame>   K  V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  F  C  S  :  R  K  K  I  :  K  K  K  Q  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="17" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="17" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125509" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KVSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="18">
          <exon_coordinates>
            <exon e_start="125507" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127133"/>
            <exon e_start="130301" e_stop="130321"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.905"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125507" e_stop="125636" e_length="130"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127133" e_length="207"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="127134" i_stop="130300" i_length="3167"/>
          </intron>
          <exon e_serial="4" e_score="0.905">
            <gDNA_exon_boundary e_start="130301" e_stop="130321" e_length="21"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610322" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586177" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125521" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
              <exon start="130301" stop="130321"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308793" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125521" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127136"/>
              <exon start="128298" stop="128309"/>
              <exon start="130301" stop="130321"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732387" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127132"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="18" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCT : ATAAAAAAAAACAAAAAAATA</gDNA_template>
            <first_frame> T  K  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  Y  F  V  L :   *  K  K  T  K  K   </first_frame>
            <second_frame>  Q  S  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  I  L  F   : Y  K  K  K  Q  K  N  </second_frame>
            <third_frame>   K  V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  F  C  S  :  I  K  K  N  K  K  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="18" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="18" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125509" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KVSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="19">
          <exon_coordinates>
            <exon e_start="125500" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127133"/>
            <exon e_start="128017" e_stop="128068"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.654"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125500" e_stop="125636" e_length="137"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127133" e_length="207"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="127134" i_stop="128016" i_length="883"/>
          </intron>
          <exon e_serial="4" e_score="0.654">
            <gDNA_exon_boundary e_start="128017" e_stop="128068" e_length="52"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125500" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
              <exon start="128017" stop="128068"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717505" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610322" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586177" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127132"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="19" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCT : AAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAA</gDNA_template>
            <first_frame> I  V  N  K  V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  F  C  S  :  K  N  *  N  K  K  L  R  I  I  K  G  S  K  N  K  R  </first_frame>
            <second_frame>  L  *  T  K  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  Y  F  V  L :   R  I  K  I  K  N  *  E  *  L  R  D  Q  R  I  K  E </second_frame>
            <third_frame>   C  E  Q  S  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  I  L  F   : *  E  L  K  *  K  I  K  N  N  *  G  I  K  E  *  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="19" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125500" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IVNKVSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="19" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="20">
          <exon_coordinates>
            <exon e_start="125497" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127133"/>
            <exon e_start="128017" e_stop="128067"/>
            <exon e_start="128298" e_stop="128309"/>
            <exon e_start="130301" e_stop="130321"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="0.647"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.750"/>
          <exon-only e_score="0.857"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125497" e_stop="125636" e_length="140"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127133" e_length="207"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="127134" i_stop="128016" i_length="883"/>
          </intron>
          <exon e_serial="4" e_score="0.647">
            <gDNA_exon_boundary e_start="128017" e_stop="128067" e_length="51"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.304">
            <gDNA_intron_boundary i_start="128068" i_stop="128297" i_length="230"/>
          </intron>
          <exon e_serial="5" e_score="0.750">
            <gDNA_exon_boundary e_start="128298" e_stop="128309" e_length="12"/>
          </exon>
          <intron i_serial="5" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="128310" i_stop="130300" i_length="1991"/>
          </intron>
          <exon e_serial="6" e_score="0.857">
            <gDNA_exon_boundary e_start="130301" e_stop="130321" e_length="21"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125497" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
              <exon start="128017" stop="128067"/>
              <exon start="128298" stop="128309"/>
              <exon start="130301" stop="130321"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717572" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125507" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610322" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586177" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127132"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125557" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="20" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCT : AAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGA : AGGAAAAAAATA : ATAAAAAAAAACAAAAAAATA</gDNA_template>
            <first_frame> L  I  V  N  K  V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  F  C  S  :  K  N  *  N  K  K  L  R  I  I  K  G  S  K  N  K  R  :  R  K  K  I  :  I  K  K  N  K  K  I </first_frame>
            <second_frame>  S  L  *  T  K  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  Y  F  V  L :   R  I  K  I  K  N  *  E  *  L  R  D  Q  R  I  K  E :   G  K  K  * :   *  K  K  T  K  K   </second_frame>
            <third_frame>   H  C  E  Q  S  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  I  L  F   : *  E  L  K  *  K  I  K  N  N  *  G  I  K  E  *  K   : K  E  K  N   : N  K  K  K  Q  K  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="20" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125497" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LIVNKVSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="20" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="21">
          <exon_coordinates>
            <exon e_start="125512" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127132"/>
            <exon e_start="128298" e_stop="128309"/>
            <exon e_start="130575" e_stop="130613"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.750"/>
          <exon-only e_score="0.667"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125512" e_stop="125636" e_length="125"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127132" e_length="206"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.304">
            <gDNA_intron_boundary i_start="127133" i_stop="128297" i_length="1165"/>
          </intron>
          <exon e_serial="4" e_score="0.750">
            <gDNA_exon_boundary e_start="128298" e_stop="128309" e_length="12"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="128310" i_stop="130574" i_length="2265"/>
          </intron>
          <exon e_serial="5" e_score="0.667">
            <gDNA_exon_boundary e_start="130575" e_stop="130613" e_length="39"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127132"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125523" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127132"/>
              <exon start="128298" stop="128309"/>
              <exon start="130575" stop="130613"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="21" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTC : AGGAAAAAAATA : AAAATTTAAAATAAAAATGAAAAAATCAAATATTATAAC</gDNA_template>
            <first_frame> V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  F  C  S :   G  K  K  * :   K  F  K  I  K  M  K  K  S  N  I  I   </first_frame>
            <second_frame>  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  Y  F  V   : Q  E  K  N   : K  N  L  K  *  K  *  K  N  Q  I  L  *  </second_frame>
            <third_frame>   E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  I  L  F  :  R  K  K  I  :  K  I  *  N  K  N  E  K  I  K  Y  Y  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="21" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="21" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125512" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="22">
          <exon_coordinates>
            <exon e_start="125484" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127132"/>
            <exon e_start="127955" e_stop="127969"/>
            <exon e_start="128298" e_stop="128309"/>
            <exon e_start="130303" e_stop="130326"/>
            <exon e_start="132044" e_stop="132060"/>
            <exon e_start="137303" e_stop="137386"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="0.867"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.750"/>
          <exon-intron don_prob="0.900" acc_prob="0.990" e_score="0.750"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.588"/>
          <exon-only e_score="0.750"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125484" e_stop="125636" e_length="153"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127132" e_length="206"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="127133" i_stop="127954" i_length="822"/>
          </intron>
          <exon e_serial="4" e_score="0.867">
            <gDNA_exon_boundary e_start="127955" e_stop="127969" e_length="15"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.304">
            <gDNA_intron_boundary i_start="127970" i_stop="128297" i_length="328"/>
          </intron>
          <exon e_serial="5" e_score="0.750">
            <gDNA_exon_boundary e_start="128298" e_stop="128309" e_length="12"/>
          </exon>
          <intron i_serial="5" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="128310" i_stop="130302" i_length="1993"/>
          </intron>
          <exon e_serial="6" e_score="0.750">
            <gDNA_exon_boundary e_start="130303" e_stop="130326" e_length="24"/>
          </exon>
          <intron i_serial="6" don_prob="0.900" acc_prob="0.990">
            <gDNA_intron_boundary i_start="130327" i_stop="132043" i_length="1717"/>
          </intron>
          <exon e_serial="7" e_score="0.588">
            <gDNA_exon_boundary e_start="132044" e_stop="132060" e_length="17"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="132061" i_stop="137302" i_length="5242"/>
          </intron>
          <exon e_serial="8" e_score="0.750">
            <gDNA_exon_boundary e_start="137303" e_stop="137386" e_length="84"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125484" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127132"/>
              <exon start="127955" stop="127969"/>
              <exon start="128298" stop="128309"/>
              <exon start="130303" stop="130326"/>
              <exon start="132044" stop="132060"/>
              <exon start="137303" stop="137386"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723254" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127126"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127132"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="22" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCCAAAATCATCCCTCATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTC : AAAGAGAAAAAAAAA : AGGAAAAAAATA : AAAAAAAAACAAAAAAATATGTTG : GTCCTTTAATGGGCCAG : TATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</gDNA_template>
            <first_frame> P  K  I  I  P  H  C  E  Q  S  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  I  L  F  :  K  E  K  K  K  :  R  K  K  I  :  K  K  K  Q  K  N  M  L  :  V  L  *  W  A  S :   I  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F   </first_frame>
            <second_frame>  P  K  S  S  L  I  V  N  K  V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  F  C  S :   K  R  K  K  K :   G  K  K  * :   K  K  N  K  K  I  C  W :   S  F  N  G  P   : V  Y  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  </second_frame>
            <third_frame>   Q  N  H  P  S  L  *  T  K  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  Y  F  V   : Q  R  E  K  K   : K  E  K  N   : K  K  K  T  K  K  Y  V   : G  P  L  M  G  Q  :  Y  I  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="22" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125485" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PKSSLIVNKVSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="22" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="23">
          <exon_coordinates>
            <exon e_start="125512" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127123"/>
            <exon e_start="128298" e_stop="128309"/>
            <exon e_start="130575" e_stop="130607"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.750"/>
          <exon-only e_score="0.727"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125512" e_stop="125636" e_length="125"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127123" e_length="197"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.304">
            <gDNA_intron_boundary i_start="127124" i_stop="128297" i_length="1174"/>
          </intron>
          <exon e_serial="4" e_score="0.750">
            <gDNA_exon_boundary e_start="128298" e_stop="128309" e_length="12"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="128310" i_stop="130574" i_length="2265"/>
          </intron>
          <exon e_serial="5" e_score="0.727">
            <gDNA_exon_boundary e_start="130575" e_stop="130607" e_length="33"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127123"/>
              <exon start="128298" stop="128309"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303572" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125562" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127123"/>
              <exon start="128298" stop="128309"/>
              <exon start="130575" stop="130607"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E719231" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="23" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTAT : AGGAAAAAAATA : AAAATTTAAAATAAAAATGAAAAAATCAAATAT</gDNA_template>
            <first_frame> V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I :   G  K  K  * :   K  F  K  I  K  M  K  K  S  N   </first_frame>
            <second_frame>  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L   : *  E  K  N   : K  N  L  K  *  K  *  K  N  Q  I  </second_frame>
            <third_frame>   E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y  :  R  K  K  I  :  K  I  *  N  K  N  E  K  I  K  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="23" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="23" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125512" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="24">
          <exon_coordinates>
            <exon e_start="125512" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127124"/>
            <exon e_start="128298" e_stop="128309"/>
            <exon e_start="130301" e_stop="130322"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.750"/>
          <exon-only e_score="0.818"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125512" e_stop="125636" e_length="125"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127124" e_length="198"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.304">
            <gDNA_intron_boundary i_start="127125" i_stop="128297" i_length="1173"/>
          </intron>
          <exon e_serial="4" e_score="0.750">
            <gDNA_exon_boundary e_start="128298" e_stop="128309" e_length="12"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="128310" i_stop="130300" i_length="1991"/>
          </intron>
          <exon e_serial="5" e_score="0.818">
            <gDNA_exon_boundary e_start="130301" e_stop="130322" e_length="22"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127124"/>
              <exon start="128298" stop="128309"/>
              <exon start="130301" stop="130322"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614535" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125519" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="24" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATA : AGGAAAAAAATA : ATAAAAAAAAACAAAAAAATAT</gDNA_template>
            <first_frame> V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  I  :  R  K  K  I  :  I  K  K  N  K  K  I  </first_frame>
            <second_frame>  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L  * :   G  K  K  * :   *  K  K  T  K  K  Y </second_frame>
            <third_frame>   E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F  Y   : K  E  K  N   : N  K  K  K  Q  K  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="24" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="24" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125512" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="25">
          <exon_coordinates>
            <exon e_start="125512" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127121"/>
            <exon e_start="128023" e_stop="128069"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.660"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125512" e_stop="125636" e_length="125"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127121" e_length="195"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="127122" i_stop="128022" i_length="901"/>
          </intron>
          <exon e_serial="4" e_score="0.660">
            <gDNA_exon_boundary e_start="128023" e_stop="128069" e_length="47"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126682" stop="126747"/>
              <exon start="126927" stop="127121"/>
              <exon start="128023" stop="128069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219664" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="25" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTT : TAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAAT</gDNA_template>
            <first_frame> V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  :  *  N  K  K  L  R  I  I  K  G  S  K  N  K  R   </first_frame>
            <second_frame>  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  F :   K  I  K  N  *  E  *  L  R  D  Q  R  I  K  E  </second_frame>
            <third_frame>   E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F   : L  K  *  K  I  K  N  N  *  G  I  K  E  *  K  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="25" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="25" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125512" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="26">
          <exon_coordinates>
            <exon e_start="125512" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127121"/>
            <exon e_start="128298" e_stop="128309"/>
            <exon e_start="137306" e_stop="137374"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.750"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125512" e_stop="125636" e_length="125"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127121" e_length="195"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.304">
            <gDNA_intron_boundary i_start="127122" i_stop="128297" i_length="1176"/>
          </intron>
          <exon e_serial="4" e_score="0.750">
            <gDNA_exon_boundary e_start="128298" e_stop="128309" e_length="12"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="128310" i_stop="137305" i_length="8996"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="137306" e_stop="137374" e_length="69"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459958" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
              <exon start="128298" stop="128309"/>
              <exon start="137306" stop="137374"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734080" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125514" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125515" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E568562" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125522" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125529" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125546" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125560" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125584" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126727" stop="126747"/>
              <exon start="126927" stop="127116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744465" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="26" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTT : AGGAAAAAAATA : ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</gDNA_template>
            <first_frame> V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  :  R  K  K  I  :  I  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F </first_frame>
            <second_frame>  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L :   G  K  K  * :   F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F   </second_frame>
            <third_frame>   E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F   : *  E  K  N   : N  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="26" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="26" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125512" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="27">
          <exon_coordinates>
            <exon e_start="125513" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127081"/>
            <exon e_start="128298" e_stop="128309"/>
            <exon e_start="129507" e_stop="129512"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.750"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125513" e_stop="125636" e_length="124"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127081" e_length="155"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.304">
            <gDNA_intron_boundary i_start="127082" i_stop="128297" i_length="1216"/>
          </intron>
          <exon e_serial="4" e_score="0.750">
            <gDNA_exon_boundary e_start="128298" e_stop="128309" e_length="12"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="128310" i_stop="129506" i_length="1197"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="129507" e_stop="129512" e_length="6"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125520" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127081"/>
              <exon start="128298" stop="128309"/>
              <exon start="129507" stop="129512"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226634" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="27" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAA : AGGAAAAAAATA : AAAAAA</gDNA_template>
            <first_frame> *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V   : K  E  K  N   : K  K  </first_frame>
            <second_frame>  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  :  R  K  K  I  :  K  K </second_frame>
            <third_frame>   S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  K :   G  K  K  * :   K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="27" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="27" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125515" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="28">
          <exon_coordinates>
            <exon e_start="125499" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127081"/>
            <exon e_start="128298" e_stop="128309"/>
            <exon e_start="132037" e_stop="132043"/>
            <exon e_start="133908" e_stop="133941"/>
            <exon e_start="136213" e_stop="136219"/>
            <exon e_start="137283" e_stop="137402"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.839" e_score="0.750"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.714"/>
          <exon-intron don_prob="0.000" acc_prob="0.244" e_score="0.765"/>
          <exon-intron don_prob="0.377" acc_prob="0.000" e_score="0.714"/>
          <exon-only e_score="0.458"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125499" e_stop="125636" e_length="138"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127081" e_length="155"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.304">
            <gDNA_intron_boundary i_start="127082" i_stop="128297" i_length="1216"/>
          </intron>
          <exon e_serial="4" e_score="0.750">
            <gDNA_exon_boundary e_start="128298" e_stop="128309" e_length="12"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.839">
            <gDNA_intron_boundary i_start="128310" i_stop="132036" i_length="3727"/>
          </intron>
          <exon e_serial="5" e_score="0.714">
            <gDNA_exon_boundary e_start="132037" e_stop="132043" e_length="7"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="132044" i_stop="133907" i_length="1864"/>
          </intron>
          <exon e_serial="6" e_score="0.765">
            <gDNA_exon_boundary e_start="133908" e_stop="133941" e_length="34"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.244">
            <gDNA_intron_boundary i_start="133942" i_stop="136212" i_length="2271"/>
          </intron>
          <exon e_serial="7" e_score="0.714">
            <gDNA_exon_boundary e_start="136213" e_stop="136219" e_length="7"/>
          </exon>
          <intron i_serial="7" don_prob="0.377" acc_prob="0.000">
            <gDNA_intron_boundary i_start="136220" i_stop="137282" i_length="1063"/>
          </intron>
          <exon e_serial="8" e_score="0.458">
            <gDNA_exon_boundary e_start="137283" e_stop="137402" e_length="120"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125499" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127081"/>
              <exon start="128298" stop="128309"/>
              <exon start="132037" stop="132043"/>
              <exon start="133908" stop="133941"/>
              <exon start="136213" stop="136219"/>
              <exon start="137283" stop="137402"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E719382" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125513" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125516" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125517" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125539" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397341" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="28" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATTGTGAACAAAGTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAA : AGGAAAAAAATA : AAAACAG : AACAAAAAGTAAAATGAAAAAAAAATATATAAAA : AAACAAG : AAAAATTAAACATTCTAATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</gDNA_template>
            <first_frame> H  C  E  Q  S  E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  :  R  K  K  I  :  K  T   : E  Q  K  V  K  *  K  K  N  I  *  K :   N  K  :  K  N  *  T  F  *  Y  I  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F </first_frame>
            <second_frame>  I  V  N  K  V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  K :   G  K  K  * :   K  Q  :  N  K  K  *  N  E  K  K  I  Y  K   : K  T  R :   K  I  K  H  S  N  I  Y  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F   </second_frame>
            <third_frame>   L  *  T  K  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V   : K  E  K  N   : K  N  R :   T  K  S  K  M  K  K  K  Y  I  K  :  K  Q   : E  K  L  N  I  L  I  Y  I  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="28" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125500" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IVNKVSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="28" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="28" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="127069" stop="127081"/>
                    <exon start="128298" stop="128309"/>
                    <exon start="132037" stop="132043"/>
                    <exon start="133908" stop="133941"/>
                    <exon start="136213" stop="136219"/>
                    <exon start="137283" stop="137401"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLEVKEKNKNRTKSKMKKKYIKKQEKLNILIYIFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="25" PGL_strand="+" PGL_start="152897" PGL_stop="153358"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="152897" e_stop="153358"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="152897" e_stop="153358" e_length="462"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="152897" stop="153358"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232888" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="152897" stop="153354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="152897" stop="153234"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231111" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="25" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCTATACAATTTATTTTTTCAGAATGCCCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAAGAACAAGTTGTTTCTGGAATGATGTACTATATAACACTTGTGGCAACTGATGATGGAAATAAAAAAGATTATGAAGCCAAGATTTGGGTGAAGGAATGGGAGGACTTCAAGAAAGTTATAAGCTTCAAGCTTGTTGGTAAGGATAGTGCAATAATTGGGGGCTTTACCGATGTTCCATTCCCAAACAAACGCGAGTTCCAAGATCTTACACGTTTTGCTATTCAGGATTATAATAAGAAAGAGGTTATTTACAATGACTTACTCATCTTCTATTTTTTCCTGTTAATTTCATATTCAAATTTATAATATTTTAATTTTGAACCCATTGCATGAGATATCTAATAATTATTTCATTTGAATGAACGTCATATACAATTTATTTTTCAGAATGCCCATTTGG</gDNA_template>
            <first_frame> S  Y  T  I  Y  F  F  R  M  P  I  W  S  L  *  K  F  *  M  *  K  N  K  L  F  L  E  *  C  T  I  *  H  L  W  Q  L  M  M  E  I  K  K  I  M  K  P  R  F  G  *  R  N  G  R  T  S  R  K  L  *  A  S  S  L  L  V  R  I  V  Q  *  L  G  A  L  P  M  F  H  S  Q  T  N  A  S  S  K  I  L  H  V  L  L  F  R  I  I  I  R  K  R  L  F  T  M  T  Y  S  S  S  I  F  S  C  *  F  H  I  Q  I  Y  N  I  L  I  L  N  P  L  H  E  I  S  N  N  Y  F  I  *  M  N  V  I  Y  N  L  F  F  R  M  P  I  W </first_frame>
            <second_frame>  P  I  Q  F  I  F  S  E  C  P  F  G  V  C  R  S  F  E  C  E  R  T  S  C  F  W  N  D  V  L  Y  N  T  C  G  N  *  *  W  K  *  K  R  L  *  S  Q  D  L  G  E  G  M  G  G  L  Q  E  S  Y  K  L  Q  A  C  W  *  G  *  C  N  N  W  G  L  Y  R  C  S  I  P  K  Q  T  R  V  P  R  S  Y  T  F  C  Y  S  G  L  *  *  E  R  G  Y  L  Q  *  L  T  H  L  L  F  F  P  V  N  F  I  F  K  F  I  I  F  *  F  *  T  H  C  M  R  Y  L  I  I  I  S  F  E  *  T  S  Y  T  I  Y  F  S  E  C  P  F   </second_frame>
            <third_frame>   L  Y  N  L  F  F  Q  N  A  H  L  E  F  V  E  V  L  N  V  K  E  Q  V  V  S  G  M  M  Y  Y  I  T  L  V  A  T  D  D  G  N  K  K  D  Y  E  A  K  I  W  V  K  E  W  E  D  F  K  K  V  I  S  F  K  L  V  G  K  D  S  A  I  I  G  G  F  T  D  V  P  F  P  N  K  R  E  F  Q  D  L  T  R  F  A  I  Q  D  Y  N  K  K  E  V  I  Y  N  D  L  L  I  F  Y  F  F  L  L  I  S  Y  S  N  L  *  Y  F  N  F  E  P  I  A  *  D  I  *  *  L  F  H  L  N  E  R  H  I  Q  F  I  F  Q  N  A  H  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="25" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="152899" stop="153264"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>363</number_coding_nucleotides>
                  <number_encoded_amino_acids>121</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LYNLFFQNAHLEFVEVLNVKEQVVSGMMYYITLVATDDGNKKDYEAKIWVKEWEDFKKVISFKLVGKDSAIIGGFTDVPFPNKREFQDLTRFAIQDYNKKEVIYNDLLIFYFFLLISYSNL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 971 chains have been computed
$ 
$ memory statistics:
$ 5040416 bytes spliced alignments in total
$ 330 spliced alignments have been stored
$ 15273 bytes was the average size of a spliced alignment
$ 62576 bytes predicted gene locations in total
$ 25 predicted gene locations have been stored
$ 2503 bytes was the average size of a predicted gene location
$ 5 megabytes was the average size of the backtrace matrix
$ 1092 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 12:25:34
-->
