<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 12:25:45"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U325721" ref_strand="+" ref_description="SGN-U325721        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, identical to anthocyanin-related membrane protein 1 (Arabidopsis thaliana) GI:16416383; supporting cDNA gi:16416382:dbj:AB060644.1: | chr3:21932723-21935392 REVERSE | Aliases: F25L23.170(evalue: 3e-122, score=435) genbank/nr: gi|22331865|ref|NP_191490.2| (Anm1) anthocyanin-related membrane protein 1 [Arabidopsis thaliana] gi|16416383|dbj|BAB70612.1| anthocyanin-related membrane protein 1 [Arabidopsis thaliana] gi|20260458|gb|AAM13127.1| putative protein [Arabidopsis thaliana](evalue: 2e-120, score=435)">
      <seq>ggcgattggcggccaatcggccgaattcccatggggatccgatgaatcaattttatcatcataaaaactttattatataatcctcgcaaaaaaatattaatttttattttgaagaacaaagagagtgtgcagttttctgcattctctctgaaaattgttcgcggtgattaattggggtttttcccagtatttgaagctatataagtgtattgagtaatttgctaaattatgatgaacatgaagggaatttggaccaaacagacattgattaatctcctgttagggcaatttctctcccttttgattacttctactgggtttttatcatccgaactcgctagaaaaggaatcaatgcaccgacgtcccagtcttttcttaattacgtgctcttggcattattttatggagtttttatgatttacaggcaagaagggatcaaggcaaaatggtatttttacatcctccttggaatagttgatgtggaggccaactttctagttgtgaaggcttaccagtacacatccttaacaagcgtgatgttgctggattgctgggcaattccgtgtgttctgctttttacgtggtttttcttgaagacaaaatacagacccagaaaattagttggtgttgccatctgtattgctggtattgtcctggtgatattttcagatgtacatgccgaagatcgatcaagtggtagcaatcctatcaaaggggatatacttgtaattgctggagccacattatatgccgttagtaatgtcagtgaggagttttttgtcaaaagtgctgatatggttgaactcatggcatttctgggcctttttggtgccattgttagtggttgccaaataggcatacttgagcgcaatgagttgaagtccattcactggtcagctggagcagcacttccctttgttggatttgcattggcgatgtttcttttctactcatttgttcccattttgctgaagaggagtggtgctacaatgctaaatctagccttgcttacctctgatatgtgggctgttgtaattcgtatctttgtataccatcagaaggttgactggatatattttgtagcttttgctgctgttgctgtgggtcttcttatttattctgggcgggataaggtggataagaacgtagctgatgaaggcattgtaagaagcaagcgatttgacgaggaaactggcctagataatcctgcacgaaaagatgccattgagagctcaagaactgaagaaagttttgacgccgaaacagtgcctggaatatacggaagataaatttattgtagttttgagactttcttttttttttttttatttcttcctctatcccctgtaggaaaggtcttattccatttgcgttaatgtgatgtagctgccaaacagtctctgtcattttacttaaataaaacttcagtatcattttatcactaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="12829" stop="20511"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13128" g_stop="13430" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="346" r_length="303" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13431" i_stop="14367" i_length="937">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14368" g_stop="14462" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="441" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14463" i_stop="15338" i_length="876">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15339" g_stop="15396" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="499" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="15397" i_stop="15981" i_length="585">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="15982" g_stop="16176" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="500" r_stop="694" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="16177" i_stop="16462" i_length="286">
            <donor d_prob="0.702" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="16463" g_stop="16539" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="695" r_stop="771" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="16540" i_stop="17283" i_length="744">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17284" g_stop="17366" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="772" r_stop="854" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="17367" i_stop="17530" i_length="164">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="17531" g_stop="17582" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="855" r_stop="906" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="17583" i_stop="18474" i_length="892">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="18475" g_stop="18543" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="907" r_stop="975" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="18544" i_stop="18786" i_length="243">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.874" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="18787" g_stop="18873" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="976" r_stop="1062" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="18874" i_stop="18990" i_length="117">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="18991" g_stop="19052" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1063" r_stop="1124" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="19053" i_stop="19889" i_length="837">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="19890" g_stop="20216" g_length="327"/>
          <reference_exon_boundary r_type="cDNA" r_start="1125" r_stop="1452" r_length="328" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-U325721" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>1408</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U325721" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13128" e_stop="13430"/>
          <exon e_start="14368" e_stop="14462"/>
          <exon e_start="15339" e_stop="15396"/>
          <exon e_start="15982" e_stop="16176"/>
          <exon e_start="16463" e_stop="16539"/>
          <exon e_start="17284" e_stop="17366"/>
          <exon e_start="17531" e_stop="17582"/>
          <exon e_start="18475" e_stop="18543"/>
          <exon e_start="18787" e_stop="18873"/>
          <exon e_start="18991" e_stop="19052"/>
          <exon e_start="19890" e_stop="20216"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATCAATTTTATCATCATAAAAACTTTATTATATAATCCTCGCAAAAAAATATTAATTTTTATTTTGAAGAACAAAGAGAGTGTGCAGTTTTCTGCATTCTCTCTGAAAATTGTTCGCGGTGATTAATTGGGGTTTTTCCCAGTATTTGAAGCTATATAAGTGTATTGAGTAATTTGCTAAATTATGATGAACATGAAGGGAATTTGGACCAAACAGACATTGATTAATCTCCTGTTAGGGCAATTTCTCTCCCTTTTGATTACTTCTACTGGGTTTTTATCATCCGAACTCGCTAGAAAAGGTAAAATTCTCTCTTGATTTTACTTTCTGTTCGAGTTTTTTTAAGTATACTGTTTGATTTTGATGTAAATTATATAATCTGAAGCTCGAGTGGGTGGACTCTGTGTTGTAGGAGCTAAGTTTTTCGTACTAAATGTGAGGTATAGATTCATCATAGCATTGAACAGTTATATATATATATATATACATACTTTTTTTTAATTTTATGGCAAGTACTCAAGCATGGGGCCTAGTGGTCAATAATGAAGTTGTTGGAGCAATGAGGTGTCAGGTTCAAATTCCAACGCGACAAAAACACTCGGTGATTCTTCCATGTGTTATAGTTTTGGTGGATAAAGTTATCTGGTACTTGTTGGTGGGAGGTGTTAGGTTTTCCCGTGAAATTAATGGAGGTGCATGAAAGCTGGTTCGGGCACCGCAATTTGAATTGATTAAAAGGGTAAGATTGATGTGTTATTGAAGATGGTGGATGTAGTGAAATATTAATTGTGGGCTCATAAATGAAAATTGGAGATTCAGTTTGGGAGGTAGATAATTGGAAAAATACTTCCCTTCAAAGTTTTGTTATCCAAACACTCTTTTTCCACAGAATTTTGCTTAGTATCTAGTCTATGGTCAAAGTACATCATCCCTATGGAGTGGAACCAGTATTAGCTAGCAAATTGAGTTCTTGAGATGGCTCTGTGAATATTTTTGTCTCTTTTAGCTTGTATTAATGGATGGTGAAGTGCAAGGGGAGGGTAGCAATGGTGTTCTAAACACGGACGTTCAGAAAATTTCGTACAAAGATAGTTTGGGGGTGATATAGAAGATATTGCCACCCAATATTCTGTCCTTGGCCTCTCCATTCCTTCCTTCAAAAGACAAAGTGTAATTTAATATTTAGTGTCCTTTATCCATATCTCTTTTTTGATAAGTAATTTGTTTCCTTGTTATAGGAATCAATGCACCGACGTCCCAGTCTTTTCTTAATTACGTGCTCTTGGCATTATTTTATGGAGTTTTTATGATTTACAGGCAAGAAGGGATCAAGGTTTGCTTCAGTTAGATTTTTCATCATTGTTCGGCATATAATTTTCTAATGTGCTTTCTGCAATTTAATTATTTGACATATATCTGAAGAATGACAATACTTTTTGACAAGTATATGAAGGCTGCCATTTTGTGGTGGAAGTTAGTTATCAGTGTTCTGAGGCATGTTGAATATCCTAGGCTCAGGAAAAAAATATAGTATTTCAAAATATGTCCGAGATCTAATCAATTCCTGCAAGAGTAATTAGGCCTAATTTGGTTATTCTCCATACAACATTTTCTTTTCTATTGGCCTTGCATATTCTCCCACTTAGTACACCTATTTTTCATTTCTCACCTAAGTAGTTATTAAAAGAGAATTATGTTCAGCACATATAGAGTGAAAGCTTTTGGGACAAAGTTTAAGGGCTTTGACGAATCCTTAATTTGAGAACCAAAAAACTAGCCTGAACTCGTTTCGAGGCACATTGCTTGAACAAGTTCTGATGTGTTGCTATTTACTGTAGAATATGAATATCCAACTTAAACCCTTATTGTGACAGGAGGGGGGGTGGAGTGGGGGAGAGTAGCTCAAAACTTTTATATACCTTATCAAATACTCTTAAGATCAAAGGTTGGCTAGCATACCATATGTGGCGAGTATTCAACTTGAAACCTTGACACTATGGATTGAGTATTCCAGTTCCCATGACATGTAAAAGCTCCTTTTAATGCCGTTATCAGATATTGGACATCTATATTCAAAAGAATTCCTAAGAATTGTGTTCTTTTTCTTTGTTTTAAACAACATTATTTGCTGATGCTTATTTAATTTAGCAAGCTGTTGCATTCAGATTGGATGCTTTGTTTACCTTCATTTTCTTTTCTGTTTGACCAGGCAAAATGGTATTTTTACATCCTCCTTGGAATAGTTGATGTGGAGGCCAACTTTCTAGGTAATTGCCTTACTTACCTTCTCTTGTGGATGGAATGCAACTGAACTGTTCTCCCTCATCTTTCTCCATCTCTTTCAATCTTCCAGAAATGAACATGTTCTACTTGATGAGTATTCACTGATCAAACCTTGATGACTTGCTTTTTACTAAACGATATACATGCAATGTTACTTCTATTTAAAAAGTCAATTCCGTCCATGTCAGCTAAACTATGTGATTAAAAGGCAATTCCGTGCATATCAGTTGAACTATGTGATTATTATGCATCATGGGAACATCACTATGTTGGACAACAGAACCAAAAAAACTAGTACGATAGTTCTTCCTCAACGTTCTAGTGTTTGTTCTTCGATTGTTTCTTGCTAGGATTGACCACAAAACCATATGAGTGTTTTATGAAGATTTTTCTTTAGCATTGCATCGTCTCTCAAAATACGTAGTTTCCTCTGTACTTCTACAGACGATAATCTCCTCATCTGGATTGAGATTATGAGGATTGGCAATGCATGTTTGCACAAAATAGGAATTCCACATTTTGATATTAAGTAAACTCTCAGTTCATTTTCTGTTGCCTTTGCTTTGCAGTTGTGAAGGCTTACCAGTACACATCCTTAACAAGCGTGATGTTGCTGGATTGCTGGGCAATTCCGTGTGTTCTGCTTTTTACGTGGTTTTTCTTGAAGACAAAATACAGACCCAGAAAATTAGTTGGTGTTGCCATCTGTATTGCTGGTATTGTCCTGGTGATATTTTCAGATGTACATGCCGAAGATCGATCAAGTAATACTGTTACAACCAGTAGTCATCCTACTTGTTCCCTTTGATGTTCATTATTCATGTGGCTTCACTGCATGCCCTTTTCCATTGCTTAAGTTGGTTTATATGTATGATCGTATATCATCTGCTACTTTTTGGAAAGGGGGTAATCATATGATTCTTTGTGAATCTAATCCAGCTGCTTCTCATTTTAGTGATTTTGCGCTTTAGTAATTTGCCGGCTCCATTTAACTCAAATTCAGCATGTCTATTAGCAGAAAAATAATACTTTAATTTCTCACTGCTGTAGGTGGTAGCAATCCTATCAAAGGGGATATACTTGTAATTGCTGGAGCCACATTATATGCCGTTAGTAATGTCAGTGAGGTAAGCAAATGATATCTGTGAATATTCAGTTATTCACTAGCTCCTTTGAACCAAAAATGATATCTATGTATAGTTAGAGAACTTCTTTCTTCCCTGTGTGGATGCCTCAGCGAGGAGGTTGGAAATGGTAGGTAGGAGGAGATGTAAATGTAGGCTGAAGAAGTATTGGGGAGAGGTGATTAAACATGACATATCTGTAGTTTATCAAGAACATGACCCTTGAGGATATGAAGGTCGATGATTAGGGTAGAAGACTATAGGTTCCTTCTCAGTATTATTACTATTACTCTCCTATTATCTTGTCCTTCGAGTGCTATTTTATCCGTTATCCTGTGCTTCAGTTGTATTATTTATTGTTTTTACTGTTCTTTGCTATATTGTTTATTTTTGCACTGTTGTATTTTCTTCTCAAACCTGCTTTAAAATGCTTTACTTGAGGGTTTATTGGAAACAACCTCTCTACCTTCACAAGGTAGGGGTGCGTAGCCCCACTTCTGGGATTACACAACATATGTTGTTAGCAATTCACCTTATGATAAAGGATAAAAGTCATTCCACAAACTGTGAAGGCAATAATAGACGGGGAGTTCCATTCTTGTATATATTATATTTTTCTCAGGTAGCATTGATTCCTTGTACAGTACATTACTCTTTTTACTATGAACTATTTCTTTCTTGGTCTTGATACTCAAGTTGGTTAGCCTGTTTCACATTGTTAATGCTTTAATTTCATGTTCTATGCAGGAGTTTTTTGTCAAAAGTGCTGATATGGTTGAACTCATGGCATTTCTGGGCCTTTTTGGTGCCATTGTTAGTGGTTGCCAAATGTATCCTAATTCTCTTTAATGTTCAAAACACAATTCACACATTTGGATGATACTTGATTCAGTCATTATAAGAGCTTATAGGGTTTAAACTTCTTTCTTGATAAATCCATATTCTTTCACATGCTGATGATTTTCTGTACGCAATTTCTTTAACCATGCTACAGAGGCATACTTGAGCGCAATGAGTTGAAGTCCATTCACTGGTCAGCTGGAGCAGTAAGTCTCTTATCTTTGATCTACTTCCTCGCAAATGAACATGGATACAGAAAATGAAGAAAGACATAAATGCTGCCTTCAGAAGAGCAAACTGGTGTAGCATTATTATCTTTAATTTCTGAGCAAGTTCACTGATGTTGGATTTATGACTTAATTGAACACTTCTTTTTCCCACAAGTATCAATGGAACCCAAACATGAAGCTGTAATTTTAAAAGGTGAACTTAACAATACACAACCTGCATTATTTTTAATTCTAAGAAGAATGGGGTCCACATTTTCCTGATGTTCCTATACAGTCATCTGCCCTCCCAATAATGAAAAGGAAAACACTGCTGAAAAAGGAATGAAATCTGATGTGATTGAGAAAGCAACATCGTACTTCTTACACCATTATAAAGTATAAAACAGTATCCAAGCTTTCAGATCCTCTCACTCCACTTTCAAAAACATTATAACTCTTTTATGTTCAACCACTTCTGCTAACAAATTGTACACGCTACAAAGAGTAAGTTTTCCCATCTTAATTCTAATTCTAAATCTGGAAAGGAAAGAAATAGAGGGCTGTTATTTTAGGAAATTGGGATAAAGGTGGTGGGCTATGGTGCGAGGGCTCAGAGTAGGGGCATTCAGGCTAAGTCACTGAATTCTGTTAACTGAAACAATATAGAAATATGAGATATGTCGGGGTCTTTTATTTCAAGGAGCCTAACTTGCCAGTCCAAAAGTAAGTCTAATAATGTGAGTTGTGAGGTTATTTAAGAGGGGAACTGACTCATCATTCCTTCTCATTTTGTGTTCATGTAATTTGTTTCATTGTCCTTTTGCTGGCAGTCTTTTAGTTTATCCTCACATTAAGTTGTTTAAACATTTATTACCATGTGGAATTTCAGGCACTTCCCTTTGTTGGATTTGCATTGGCGATGTTTCTTTTCTACTCATTTGTTCCCATTTTGCTGAAGGTATTGCCCCCTCTCTCAATCTCTCCGTCAATATATAAAATAAGCGATTGGCAGTCAACTATGTTCCAATCTAAATATAGTTGTGTTGCAATCTACACTATGTTGACCTGTTAAAGAAAATGATGTGGTGTTGTAGATATCATCTCATTCTTGGTTCTTGATAGTTATTTTCTGTTGATGCTCATTAGTTTTGGAGCTAGTTTTTTTTTTTTTCCATTCTAAGATGCCACCTTTTGGATGCAGAGGAGTGGTGCTACAATGCTAAATCTAGCCTTGCTTACCTCTGATATGTGGGCTGTTGTAATTCGTATCTTTGTATACCATCAGAAGGTTTGCAGAACAATCGGCTTCTTTTCATTTTGAGCACTAAAATCTATTTAAACGTGGAACTAATACATTTTCTGTGATTTATTAGTGTTGTTCTGAAATCAGTATCATGTTCTTCAGGTTGACTGGATATATTTTGTAGCTTTTGCTGCTGTTGCTGTGGGTCTTCTTATTTATTCTGGGTAAGTAACAATTTGGTTCCTGAATGGGGTTTATCTTCATTTTTTGTATAATAGCGCTTAGATTATTTTTTTGTCCATGTTTTCATAGAACTAAGAGGATAATCTAACTGTCGGTTAAGCTTTTATTTATATGATGGGAAATCCACCATATGCAGCTGATACTAAAAAGCTGAAGAAAGTTATTTACCTAAATCGGGCAATAAGGGAACTCTGCTTTCTCTCCTTAATATCTTATTACAACAGATTTCACTGTAGATGTGCTCTCTGCCCTTCATATCTCCATTTATCCTTTTCCATTAATGATAACTGCTAATATAAGACTCCAAGTGAACTGTTAATTTCTCCAGTCTGCCAATTTTTGAAATTTCTCCAATAGCTCAGGTTTCAAAAAGATTGTTCCTTTCTGTTCTTCGCAAAGCTGGGTCGTCACTGCTCTCTGCTGGTTGCATATGTTGAAAGACAGTGGCCTTGGAATGCTTCACCATGTGGGATTACCCTTTTGCTTCCAGAAGCTGATTATGGTGCCATCACTCTCTCTAAATGTTTTAACATCTTGGTAGAACTCCTTCCACAATACTCCTCCATAAAGCTACCCTTGAGAGATTTTCTGTCATCCACCCAAAACCTGTACTTCGTACTTATCCGTGATAACTCTCCTCCAACATGCCTGTTCTGCACTTAATCCTAACTTGGATTTGGATGGTTTCTGTTGATTATCAATTTAGTCTAGTTATCACAATGTAGAACATTAAAGAGTTTGTTCTTGTTCACTGATGAGACCCTTAACAGTCGAGTTGCAAATAGCAGAATATTTTTACATATTTGACTCCGTTTCAGGCGGGATAAGGTGGATAAGAACGTAGCTGATGAAGGCATTGTAAGAAGCAAGCGATTTGACGAGGAAACTGGCCTAGATAATCCTGCACGAAAAGATGCCATTGAGAGCTCAAGAACTGAAGAAAGTTTTGACGCCGAAACAGTGCCTGGAATATACGGAAGATAAATTTATTGTAGTTTTGAGACTTTC-TTTTTTTTTTTTTATTTCTTCCTCTATCCCCTGTAGGAAAGGTCTTATTCCATTTGCGTTAATGTGATGTAGCTGCCAAACAGTCTCTGTCATTTTACTTAAATAAAACTTCAGTATCATTTTATCACTACACCTCA</genome_strand>
        <mrna_strand>GAATCAATTTTATCATCATAAAAACTTTATTATATAATCCTCGCAAAAAAATATTAATTTTTATTTTGAAGAACAAAGAGAGTGTGCAGTTTTCTGCATTCTCTCTGAAAATTGTTCGCGGTGATTAATTGGGGTTTTTCCCAGTATTTGAAGCTATATAAGTGTATTGAGTAATTTGCTAAATTATGATGAACATGAAGGGAATTTGGACCAAACAGACATTGATTAATCTCCTGTTAGGGCAATTTCTCTCCCTTTTGATTACTTCTACTGGGTTTTTATCATCCGAACTCGCTAGAAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCAATGCACCGACGTCCCAGTCTTTTCTTAATTACGTGCTCTTGGCATTATTTTATGGAGTTTTTATGATTTACAGGCAAGAAGGGATCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAATGGTATTTTTACATCCTCCTTGGAATAGTTGATGTGGAGGCCAACTTTCTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGAAGGCTTACCAGTACACATCCTTAACAAGCGTGATGTTGCTGGATTGCTGGGCAATTCCGTGTGTTCTGCTTTTTACGTGGTTTTTCTTGAAGACAAAATACAGACCCAGAAAATTAGTTGGTGTTGCCATCTGTATTGCTGGTATTGTCCTGGTGATATTTTCAGATGTACATGCCGAAGATCGATCAA..............................................................................................................................................................................................................................................................................................GTGGTAGCAATCCTATCAAAGGGGATATACTTGTAATTGCTGGAGCCACATTATATGCCGTTAGTAATGTCAGTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTTTTTGTCAAAAGTGCTGATATGGTTGAACTCATGGCATTTCTGGGCCTTTTTGGTGCCATTGTTAGTGGTTGCCAAAT....................................................................................................................................................................AGGCATACTTGAGCGCAATGAGTTGAAGTCCATTCACTGGTCAGCTGGAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTCCCTTTGTTGGATTTGCATTGGCGATGTTTCTTTTCTACTCATTTGTTCCCATTTTGCTGAAG...................................................................................................................................................................................................................................................AGGAGTGGTGCTACAATGCTAAATCTAGCCTTGCTTACCTCTGATATGTGGGCTGTTGTAATTCGTATCTTTGTATACCATCAGAAG.....................................................................................................................GTTGACTGGATATATTTTGTAGCTTTTGCTGCTGTTGCTGTGGGTCTTCTTATTTATTCTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGATAAGGTGGATAAGAACGTAGCTGATGAAGGCATTGTAAGAAGCAAGCGATTTGACGAGGAAACTGGCCTAGATAATCCTGCACGAAAAGATGCCATTGAGAGCTCAAGAACTGAAGAAAGTTTTGACGCCGAAACAGTGCCTGGAATATACGGAAGATAAATTTATTGTAGTTTTGAGACTTTCTTTTTTTTTTTTTTATTTCTTCCTCTATCCCCTGTAGGAAAGGTCTTATTCCATTTGCGTTAATGTGATGTAGCTGCCAAACAGTCTCTGTCATTTTACTTAAATAAAACTTCAGTATCATTTTATCACTAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U331023" ref_strand="+" ref_description="SGN-U331023        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | origin recognition complex subunit 2 (ORC2), identical to origin recognition complex subunit 2 (ORC2) SP:Q38899 from (Arabidopsis thaliana) | chr2:15765726-15768287 FORWARD | Aliases: None(evalue: 2e-30, score=129) genbank/nr: gi|42571101|ref|NP_973624.1| origin recognition complex subunit 2 (ORC2) [Arabidopsis thaliana] (evalue: 1e-28, score=129)">
      <seq>tttaaagttcttgctgagcatcaattggcccatcctgatgaagaaggtatgccaataaacaacctgtacagtacgtgccgagaacggttcttggtgagcagtcaagttactttgaattcacatttgacagaatttaaagaccatgagttgatcaaaaccaaaagaaattctgatggtcaagattgcctttgtattcctctcacaaatgaagcccttcagaaacttatagcagatatcgtttgatagagcttccaatacaagaagagaaatcactcagcagcaaatttgaagcagcagaggcatgtttaatttaatgtatgacaaacttcatgtataaaaaagtgcacatcttttcacttgtgcataggagttggcctgatcctcagctggcttttactcaacatgctaggatatctattaaatatggttaacttatcaagcatctcacagagagagcaatatgaccggaatgtattcagtttgtggctttgttagatcctcatgtaatctgcttggaatgtgttggtgtttcttaatgtattttaagaagattacacaatttaactaattagtgattattatatttcaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="21337" stop="20038"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21037" g_stop="20992" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20991" i_stop="20880" i_length="112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.879" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20879" g_stop="20333" g_length="547"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="593" r_length="547" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-U331023" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>593</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U331023" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21037" e_stop="20992"/>
          <exon e_start="20879" e_stop="20333"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAAAGTTCTTGCTGAGCATCAATTGGCCCATCCTGATGAAGAAGGTAAGTGCTTTCATACTTTGCTTTCCCATTTCTATCTCCATTTCCATGCATGTTGATGCAATTAGGTCTATGCCTTTAGTCATACCTTAAAGCTGGACATGCTTCTTATTAGGTATGCCAATAAACAACCTGTACAGTACGTGCCGAGAACGGTTCTTGGTGAGCAGTCAAGTTACTTTGAATTCACATTTGACAGAATTTAAAGACCATGAGTTGATCAAAACCAAAAGAAATTCTGATGGTCAAGATTGCCTTTGTATTCCTCTCACAAATGAAGCCCTTCAGAAACTTATAGCAGATATCGTTTGATAGAGCTTCCAATACAAGAAGAGAAATCACTCAGCAGCAAATTTGAAGCAGCAGAGGCATGTTTAATTTAATGTATGACAAACTTCATGTATAAAAAAGTGCACATCTTTTCACTTGTGCATAGGAGTTGGCCTGATCCTCAGCTGGCTTTTACTCAACATGCTAGGATATCTATTAAATATGGTTAACTTATCAAGCATCTCACAGAGAGAGCAATATGACCGGAATGTATTCAGTTTGTGGCTTTGTTAGATCCTCATGTAATCTGCTTGGAATGTGTTGGTGTTTCTTAATGTATTTTAAGAAGATTACACAATTTAACTAATTAGTGATTATTATATTTCAGCTGT</genome_strand>
        <mrna_strand>TTTAAAGTTCTTGCTGAGCATCAATTGGCCCATCCTGATGAAGAAG................................................................................................................GTATGCCAATAAACAACCTGTACAGTACGTGCCGAGAACGGTTCTTGGTGAGCAGTCAAGTTACTTTGAATTCACATTTGACAGAATTTAAAGACCATGAGTTGATCAAAACCAAAAGAAATTCTGATGGTCAAGATTGCCTTTGTATTCCTCTCACAAATGAAGCCCTTCAGAAACTTATAGCAGATATCGTTTGATAGAGCTTCCAATACAAGAAGAGAAATCACTCAGCAGCAAATTTGAAGCAGCAGAGGCATGTTTAATTTAATGTATGACAAACTTCATGTATAAAAAAGTGCACATCTTTTCACTTGTGCATAGGAGTTGGCCTGATCCTCAGCTGGCTTTTACTCAACATGCTAGGATATCTATTAAATATGGTTAACTTATCAAGCATCTCACAGAGAGAGCAATATGACCGGAATGTATTCAGTTTGTGGCTTTGTTAGATCCTCATGTAATCTGCTTGGAATGTGTTGGTGTTTCTTAATGTATTTTAAGAAGATTACACAATTTAACTAATTAGTGATTATTATATTTCAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U323502" ref_strand="+" ref_description="SGN-U323502        Tomato 200607 #1 [6 ESTs aligned] arabidopsis/peptide: | Symbol: None | origin recognition complex subunit 2 (ORC2), identical to origin recognition complex subunit 2 (ORC2) SP:Q38899 from (Arabidopsis thaliana) | chr2:15765726-15768287 FORWARD | Aliases: F13M22.6, F13M22_6(evalue: 1e-76, score=205) genbank/nr: gi|15224316|ref|NP_181292.1| origin recognition complex protein [Arabidopsis thaliana] gi|2498706|sp|Q38899|ORC2_ARATH Origin recognition complex subunit 2 gi|7487984|pir||T02522 origin recognition complex chain orc2 homolog F13M22.6 - Arabidopsis thaliana gi|1113103|gb|AAC49131.1| atOrc2p gi|3236239|gb|AAC23627.1| origin recognition complex protein [Arabidopsis thaliana] gi|17979313|gb|AAL49882.1| putative origin recognition complex protein [Arabidopsis thaliana] gi|20465531|gb|AAM20248.1| putative origin recognition complex [Arabidopsis thaliana] gi|21593764|gb|AAM65731.1| origin recognition complex protein [Arabidopsis thaliana](evalue: 1e-74, score=205)">
      <seq>gcagccctaagtttcttcctaagtctccggcagagtcgccgggaaatagaccggagagagcagggggacgatgagagtatacaattttggagtctagaacttgtgtcaacttgtgcttgttaatttacagagtcttaatatttcatatttttactgaaatggatgtagacgagattgaggaagaggagtttggattctcgagaaactatttccttgctaaagaattgggctcttcttcaaggaaaaaatctgctcggaagctttcagaaatcgatctcgttgacgaagaggaattaagagaggtggcagctagtattgagcccaaacatgagaaagaagttaatgagttgatcagtagctaccaaagtttatattcaaaatggctttttgtgctaaggagcggctttgcacttttgatgtatggatttggatcaaagaaagctttgattgaagattttgcctcaaaatctttgactgagtactctgtcatagtcgtcaacgggtatctccaatctataaatcttaaacaggtggtgataacactggctgagctcctctgggatcaagtaaaattgcgacaaaagactacctcaggaagtctgtgtaaaagccaacaaccatttaacactagatccatgtctgaccttcttacttttctagacagtccagacctagaagtcgaggactgttacggttgcatccttgtcacaacattgatggtcctggattacgtgattctgacagccaacaatgtgttgcaagcattgctgcttgttctcatgttcgtatggctgcttccattgaccatgtcaacgctcctcttttgtgggacaagacgatggttcatacacaatttgactggtactggtgccatgttcctac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="24373" stop="20862"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24073" g_stop="23784" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="290" r_length="290" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23783" i_stop="22944" i_length="840">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22943" g_stop="22837" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="397" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22836" i_stop="22699" i_length="138">
            <donor d_prob="0.654" d_score="1.00"/>
            <acceptor a_prob="0.861" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22698" g_stop="22566" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="530" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="22565" i_stop="21842" i_length="724">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21841" g_stop="21547" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="531" r_stop="824" r_length="294" r_score="0.980"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="21546" i_stop="21220" i_length="327">
            <donor d_prob="0.717" d_score="0.98"/>
            <acceptor a_prob="0.797" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21219" g_stop="21162" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="825" r_stop="882" r_length="58" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-U323502" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>883</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U323502" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24073" e_stop="23784"/>
          <exon e_start="22943" e_stop="22837"/>
          <exon e_start="22698" e_stop="22566"/>
          <exon e_start="21841" e_stop="21547"/>
          <exon e_start="21219" e_stop="21162"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGCCCTAAGTTTCTTCCTAAGTCTCCGGCAGAGTCGCCGGGAAATAGACCGGAGAGAGCAGGGGGACGATGAGAGTATACAATTTTGGAGTCTAGAACTTGTGTCAACTTGTGCTTGTTAATTTACAGAGTCTTAATATTTCATATTTTTACTGAAATGGATGTAGACGAGATTGAGGAAGAGGAGTTTGGATTCTCGAGAAACTATTTCCTTGCTAAAGAATTGGGCTCTTCTTCAAGGAAAAAATCTGCTCGGAAGCTTTCAGAAATCGATCTCGTTGACGAAGAGGTTTGTGTTTTGACTCTTATTATTGTTCAACTGTATGTACAGCTTGAGCTGATTGCGCCAACTGTTCGAACACTACATTCGTGTGCTGTAGTCTTTGGCATTAGTGGCCTGAGCATATGTATTGGTTATTGTGCTATGGTTTTTTTTGATAGACTGTCTTTTGATTGTTTGTTCTGTGATCGACTGTATAACCAAAAATTTTGACATCGAGCTATCTAATGTTTGCCAATTCTTTATGTTACAAAGACTCTTCTTTTATAGTATATAGCATAGTCACTTCCTGCAAAAAACTAGGAGAAAAAGAGTATCCCTTAAGAGAATACCTTTGCTAACCCAAATAGATTGGATGATTCATTCAAGTAATTGTTAACACTTGATGAAATATTTGAGAACATGCCCCGCTTATCCTATACACTATGTTTCAATCAATTCTACTACCGTGTGTAGACGTACAGTAGTGACATTTTCTTCTTTTTTGTCATCATGACACATAATATTTCAGATAAGCGTTAGGGCAGATTTGTGATTTTTGTTAACCGCCATTTCATGTTTATCAGTGTCCTAAGATGTTAGACAAAATTTGTGATTTTTGTGATTAAGGAGAAAAGAAGGGCTGATTACTCATTGGATTTCCAATAAGTGCTTGAAGGTACATTTACCAAAGAGATGGACTACCTCATAATGTGGTCTGTGATCATTCAAATGATAAATCAATGGAAAAAGGCCATTGTACTATACCCTCAAAGATGAGGGTTTATGCACCATCTCCAAATCATACTATTTGTCCATGTTGTGCTCAAACATAAGAAAGAAGTCCATAAAAATTATTGTTGCATGCAGGAATTAAGAGAGGTGGCAGCTAGTATTGAGCCCAAACATGAGAAAGAAGTTAATGAGTTGATCAGTAGCTACCAAAGTTTATATTCAAAATGGCTTTTTGTGCTAAGGTCAGAGTCCTGATGTATCGGTTTACTCTATGCTATCCTTTTTTAATAAGTTTTTTTTATTTGCCTTTTTTCCATTATCTATCAAATTTAAACCAGGAAGGTTTTCCTTACTAATTTTCTTTTAATTTAATCTGATAGGAGCGGCTTTGCACTTTTGATGTATGGATTTGGATCAAAGAAAGCTTTGATTGAAGATTTTGCCTCAAAATCTTTGACTGAGTACTCTGTCATAGTCGTCAACGGGTATCTCCAATCTATAAATCTTAAACAGGTATTCGTCTACTGTTTTCTTCCTTGTTTAATTATTGTGCTTTCTTGGTACCTATATTTTAAAAATATTGTGTAGAAAGTCTCAAAATCCTCTGTGCAAATTTTGTGAAAAATGATGTTATAGGCATGTATATCAGGTCTAGATAGCTTACTACATGAGCTGTGTTTGGTTTGGTTGCAAGCTTCCTACTTTAGTGCGTTACAGGCTCTCTGGCATGGATTTTTAATTTAGCGCTGACAATATTTTGAAGATTATTGTTATATGTTATAACAGTGCTAATGGCTTTAATAAGGGGCCTATGACTGAAGATTTCACATTGGCTTGCCCAATAAGATGGTTATGCCCAGACTTCACAATCCTAGAACAATTGAAATAGAATTCAAGTGGTTGAAAATAATTCCGAACGCTCCTTTTCTCTTGGTCTGATGGAGGCTATCAATGCTTGAAACATCAATAACTGTATACACAATTCATGTGATTCTTGGTGCATAGTCACTGGGACTTAATATGGCAATAGTAATTCCTTTTTCTTAAGTTCCTATGCTTGTTCATAATATCACTTGTTCATAATATCAACAATTACTGCAGCTCTGACCACTCCCTTATTGTGATATCATATGCCAAAGATCTCCATGGGAAGCACATTTGACATTACGCATGTTGCTGGTGCACAATCTTTCTGAGTAATACTAAGAGATCTGCTATTGTTGATTTATAATTTCAGGTGGTGATAACACTGGCTGAGCTCCTCTGGGATCAAGTAAAATTGCGACAAAAGACTACCTCAGGAAGTCTGTGTAAAAGCCAACAACCATTTAACACTAGATCCATGTCTGACCTTCTTACTTTTCTAGACAGTCCAGACCTAGAAGTCGAGGACTGTTTTGTTTGCATTCTTGTTCACAACATTGATGGTCCTGGATTACGTGATTCTGACAGCCAACAATGTGTTGCAAGCATTGCTGCTTGTTCTCATGTTCGTATGGTTGCTTCCATTGACCATGTCAACGCTCCTCTTTGTAAGAGCTCTCTGAACACCTGTGTGAGCGTTTATATAATTGGATACAGGAGTATTTGTGGAGATCTTTTCTCCGTGTGTTGCATGTACTAGTGCATTTTACTAATTTTACGTGTTTTAAGAGTTTTTAGGTGTAGTTACTTTTGCAAATTGCTGCTTGAATGTAAATATATATCACTTTAACTATACCATCTGATGCTGAAGTGTCAAATTCTAGTCATTTCCCTTAATAATGTAACTTGGGCTGGTGTTTGAACTCTTGTTTATTATTTGCATGTCACATTCAAAAAGGTCTTATATTTGCTTTATTGGCTGTCGTATATGCCAGTGTGGGACAAGAAGATGGTTCATACACAATTTGACTGGTACTGGTGCCATGTTCCTAC</genome_strand>
        <mrna_strand>GCAGCCCTAAGTTTCTTCCTAAGTCTCCGGCAGAGTCGCCGGGAAATAGACCGGAGAGAGCAGGGGGACGATGAGAGTATACAATTTTGGAGTCTAGAACTTGTGTCAACTTGTGCTTGTTAATTTACAGAGTCTTAATATTTCATATTTTTACTGAAATGGATGTAGACGAGATTGAGGAAGAGGAGTTTGGATTCTCGAGAAACTATTTCCTTGCTAAAGAATTGGGCTCTTCTTCAAGGAAAAAATCTGCTCGGAAGCTTTCAGAAATCGATCTCGTTGACGAAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTAAGAGAGGTGGCAGCTAGTATTGAGCCCAAACATGAGAAAGAAGTTAATGAGTTGATCAGTAGCTACCAAAGTTTATATTCAAAATGGCTTTTTGTGCTAAG..........................................................................................................................................GAGCGGCTTTGCACTTTTGATGTATGGATTTGGATCAAAGAAAGCTTTGATTGAAGATTTTGCCTCAAAATCTTTGACTGAGTACTCTGTCATAGTCGTCAACGGGTATCTCCAATCTATAAATCTTAAACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGATAACACTGGCTGAGCTCCTCTGGGATCAAGTAAAATTGCGACAAAAGACTACCTCAGGAAGTCTGTGTAAAAGCCAACAACCATTTAACACTAGATCCATGTCTGACCTTCTTACTTTTCTAGACAGTCCAGACCTAGAAGTCGAGGACTGTTACGGTTGCATCCTTG-TCACAACATTGATGGTCCTGGATTACGTGATTCTGACAGCCAACAATGTGTTGCAAGCATTGCTGCTTGTTCTCATGTTCGTATGGCTGCTTCCATTGACCATGTCAACGCTCCTCTTT.......................................................................................................................................................................................................................................................................................................................................TGTGGGACAAGACGATGGTTCATACACAATTTGACTGGTACTGGTGCCATGTTCCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U329864" ref_strand="+" ref_description="SGN-U329864        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, hypothetical protein T2J13.20 - Arabidopsis thaliana, PIR:T46116 | chr3:21929432-21933683 FORWARD | Aliases: F25L23.160(evalue: 2e-71, score=266) genbank/nr: gi|18411137|ref|NP_567080.1| expressed protein [Arabidopsis thaliana] gi|15292859|gb|AAK92800.1| unknown protein [Arabidopsis thaliana] gi|20258901|gb|AAM14144.1| unknown protein [Arabidopsis thaliana](evalue: 1e-69, score=266)">
      <seq>ttgacgattacttcgagggcgaaagttctgagatgtacgactatcaagttgattgggggatgccagatagttctagcccgctgcacccagtttattttgctaagtgcttgactaaggctgttcacatgaaacatgctaagatgatggatcatccatcaaatggcatttcaatttggggacgcctcaagcctgcctttctggaagaagaatattacgtgcgaaggctcttcagtggcgatgaagttagtgacggctccaccttggattggaaagatggagaaattttgagctttagttcaagatatgacaagagccgcactttgtcttctatctacagattggaaatcatgagagtcgacctattttctgtgtatggtgctcagttagcagtaaatttgtatgacttccatgatgctgagcctgacagtcttgtatactcagctccagcaattttagagtggtttcggcagcaaggaataaggtgcaaatatgcacttaaagctctttgcagaaagaaaggacttcatgttgagagagcaaatttgattggagttgacagtcttggcatggatgtcagagttctctctggaacagaagtgtggacacatcgtttccccttcaaagttagggcacattcagagattgctgctgagaaacagatccgtcagcttctttttcccaggtctcgtcgtaagaagtttaggactgctgaaagaagtggagatttggactcactttaagtttaatcttactgtttagaagcagatgttatgaataaacatatattatctatatatgttaccaaataattgtatgcagttagttctcagttttgattttctttaatgtcgtgatggatttgaattatatatagtgatcagttgaacccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaatccgggggggggggggggggccccatttccccttagggggggggtaaaaaaatttgggggggggttttttaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="30269" stop="24214"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29969" g_stop="29953" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="17" r_length="17" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29952" i_stop="29856" i_length="97">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29855" g_stop="29757" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="116" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29756" i_stop="27766" i_length="1991">
            <donor d_prob="0.813" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27765" g_stop="27609" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="273" r_length="157" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27608" i_stop="26456" i_length="1153">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26455" g_stop="26346" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="383" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26345" i_stop="25852" i_length="494">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.636" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25851" g_stop="25702" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="533" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="25701" i_stop="25291" i_length="411">
            <donor d_prob="0.176" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="25290" g_stop="25195" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="534" r_stop="629" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="25194" i_stop="24774" i_length="421">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.810" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="24773" g_stop="24479" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="630" r_stop="924" r_length="295" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-U329864" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>924</cumulative_length_of_scored_exons>
        <coverage percentage="0.901" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U329864" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29969" e_stop="29953"/>
          <exon e_start="29855" e_stop="29757"/>
          <exon e_start="27765" e_stop="27609"/>
          <exon e_start="26455" e_stop="26346"/>
          <exon e_start="25851" e_stop="25702"/>
          <exon e_start="25290" e_stop="25195"/>
          <exon e_start="24773" e_stop="24479"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGACGATTACTTCGAGGTGAGTAAACAACCACTGCAATTTCACTATATAATTCAGCCGATTAGTCTTAGCTTATTCTTATGTTTATATGTGTCATTGTATTTGTTTTTTGCAGGGCGAAAGTTCTGAGATGTACGACTATCAAGTTGATTGGGGGATGCCAGATAGTTCTAGCCCGCTGCACCCAGTTTATTTTGCTAAGTGCTTGACTAAGGTGGTTTCTTTTAGCAACTCTCCTCCTAGCTATTTTTTGTTAATGAACTGTTTCTCGCTCCTAGCTCTATTCTGTAACTGTCACTTATATGTCTATGTTTTCATTTCCCAAATCTTATTCTTTTCACAATAACCAAAAAGAAATAATCAAAGGCATATACATAGGAAAAAGCCAGATGGCATCACTGCAACGTCGTGTTTCATTTACTGAGTACATGTCAATCCAAACTAGTTTCGGTCAATTTATTCAAGTACAATAAACACTTTTTTTATTCTCTAAAGCAGAATATGTAAAGTCTCGGCTTTTGATGCCCCAACCTTTTTCTGTATTAATGAGTTTGGGTTTCATGCATTTTTCTGGGAAAATATTGAAGAAATAAACTCAAATTCTAAAACAGGAGGCAGTAGCTGTTTCTAAAATAATATATAAGAAAACATTCACACATAAAACCGGAGGAACTTTTCGTATGAGCAACCAAATCACATCTTTACAGAATTGATGATGTTTTTAAAAATAATTCACAAAGTAGTCATTTTATTGATGAGATCACGATTGTTGCTTATTTTAGTTGACCGTATTATGGAAGCTTGAAACACAGTAGAAATATATTGAATTTTTCTTCTTTTTTTGCCTTCTTTTTTTAAGTTGAAAGTTGGAATAAGAAGTACCTAGGAGGAGGAGACATACAATGGTTGTTTTAAGGATCTATCTCAAAGTGAAGCTCTCAGTGACACTGTATAATGGATATAAATATTAAGATAACCTTCACAAGTGGACGAACTAATTTACTGGTTTCTTGGGGCCTCACTCTAACCTGAACAAGGTCGGTTTTGTAGGCTCATAACAGTGTAACCTTGATTTCTAAGGATACAAGAACCAAGTCTGGTAGAGGAAATATGGCCATTAGACCAGCGCATGATTAACAACACCATAACCTTTGAGTCATGGAGCTGTAGAGATTCACTCTCAGCTCCAATCTTGGTGTGCTAGTATGGTCTATTGTTTTTTTCTTTTGTTGATAAACCTGGTTTCGGGCCAGCGCGTATACCTCAACTAATTCCACAGGATACTTGCCACCTCACACCAACAACAGGTGCTAGGTAACTTTTCCACTAAGACTAGAACATATGGGAAGAAATCACCCAGTGTGTTTTTGTCTCTGTTAGGATTTGAACCTGAGACCTCATGGTGCCAGGGTTATTTGGTATATGTTGCTTGTTAGTAGGTATTCTATAGAATAAGTGGAGGTGCGTGAAAGCTTGGCCCGAACACCACAATTATAAGGAAAAAAAAGACATTGAGGTGCAAAAGTGCCAATCAAGTTCTGTCTCAAAAAAAAAGTGCCAATCAAGTAACATGCAACAAAAAGTACAATAAAAACTCTTCTAGCATACTGCAGTAAAGTTCTTGGTACGCCTTCCTATATATTATATTATTACCTCTCTCTGGATAATGACCTCGCATTATTGCGTTTGTCCACAATAGTTATGGGATGGGATTTGGTCTCATGCTATTAGGAAGTTCTCACATCAGGAACTAGCTTTTGGGACCCATCTAAATTCTTGGTCTACCCAATATTGGGCTTTCATATTATGTTGTCCAAGCTCTAGTTAATAGGCCTAGCTAGGTATGCAGCGGGGGAGTGTTGAATTTTTGCTCATTGGTTGTGGGATGGGTATTTGGTCTCCTTGTATGGTTTTGGTAATCCTCATCTCATGAGCTAACTTTTCGTGTTGAGTTAAGTTCAGGCTAGTTTTTGATCTCCCATCATACATGAGATGCTATGTGACGTATGGTTTTCAGAAATGACATTTGCCCAACTTTTGGAGCATACATTTAAACCTTAGCTTCTTTAATGAGTTGTGCATTAAATGGAATATGCTCTAACAATATGCTACATTTTCATTGTATCTGTTCTAAATTTGATTTTTCTGAATAGACATTGTCCAACTTGGTTCCTCTCAAGCCACAACCTATTGTGTATTTCGTAGGCTGTTCACATGAAACATGCTAAGATGATGGATCATCCATCAAATGGCATTTCAATTTGGGGACGCCTCAAGCCTGCCTTTCTGGAAGAAGAATATTACGTGCGAAGGCTCTTCAGTGGCGATGAAGTTAGTGACGGCTCCACCTTGGATTGGAAAGGTAAAGTTGAGCAATCAATAATTCGTTTCACACCCTGAGGGAAGCAGGGAATTTTCAAAATTCAAGGCTAGAAAATGTTATCTACGTTGTTTTGGTATCATAGTTTGTTGTCTTGGGTATTTAAATGGAGAAGGGTAGAAGGGCTGATGCGCAAACCGTGAGTGACGCAATGGGGATTTCTCATTTATAAAAAAAAGAATGTTTTCCTGATAAGTGATAAGTTAAAAATGTTTCTTCTGTTGATACCTTCATCTCAGGGATGATTGCTCATAAGCATTATGTATGTCTATACCTTTAAATCAATATTTGGCCTTAAGATTGCAATACAAAATGATGAATTTGCAGTAGGGATTAAGGTATAGACGATATAATGGAGTCACCTAAAATGAACTTATAGAATAGTCTAACTTAGATGAAGCTGAAAGGGGATGTTCTGGTAACAAATTATGAAATTTAGTAACTTCTTGAGGGCTGTTTAGACTACAGATTTTGTTATTTTTTCAGGTTTAGTTTCAGGTTTTAGGAGACCCCAAAAAAAAAAGAGATTGGAGTAGAAAAAGAGCAGGAATTATTTGAAGGAAAAGAAAGGAGATTGAGGAAGGATCAGTAGATATTTCTCAAATATTTCTTTGTGCAAGCTGTCCCCGTCTCCTGAAACTCGGAATTATGCTATGTGCTTCTTTAGGAGATATTGGCGGAAAATAACAAAAGCTATACGTGAGTCTTGAACTTGAGGCCAAGAAAAGACATGAAACTTGAAGCAAGTCTTGAACTTGTGGCCAAGCAAAGACATGAAACTTGAAGCGTCATAGCTTTACTTTCTTTGATCCCCTTCCTCCTGTTAAGTCTTTTAAGTTAAAATTCCTTTCACTTAAACCCACCTTTGGGAGAGTTCCTCTACAATATTCATTCCTTTAACAAAAGTATGCCTTATCCCTTTCAACTCATTTATTTAACCTGCAAAAACTGTATTGGTCTGCGCTGTTAGCTGTATGATCACTGATCTTAGTTTAGAATGATCTCTTACTCTAGATCTCAGATCAGTGTATGTGACAGTGTGAGATCTGGTCACCAAGAATCTTGTTCCTTTTCGAGTTTTTATTGTATTATTTGATTATTTATCTGTTGATTTGCTCCTTTTTTTTTGTAACAGATGGAGAAATTTTGAGCTTTAGTTCAAGATATGACAAGAGCCGCACTTTGTCTTCTATCTACAGATTGGAAATCATGAGAGTCGACCTATTTTCTGTGTATGGTGCTCAGGTATGTACTTAACTCATTTCGTGCTTGTGACGGGATTCCAGCCAACAAAAATCAGATTAGTGGGGTGGGGTGAAATGTGTTGATTCAAGTATTCTCTGTGTTTTTACTTCTAAAGATTATGATGCACATGTTTGGTGTGTGTTACGCACAATCCATTTTAAGTAGTCATACACAAAAGGAGGAGGTACTAGGCTCGTCGTTGGAAAGATGGTGTGATAAGTCACCTAAGTATGTCCAGGTGCGAAGGGGGAAATCTTGACGAGTGAGGGATTAAAGTATGTATTGAGTCTCTCTTTGTTACATCTTAATCTTGCTTATTGAGTAGTATTGCATGTATGGATTATCTAGTTTTAGTATTTCCTATCCGAAAAGAACTGAAATATGGTAGAAGAATACGATGCGTGCAGAAATGAAAATATTTTTTTTTGAAGTATTCTAGGACTCCGATAGGCAATAATGTAATGCTCAACGTTCATGCCTCTTTTTTGACGCAGTTAGCAGTAAATTTGTATGACTTCCATGATGCTGAGCCTGACAGTCTTGTATACTCAGCTCCAGCAATTTTAGAGTGGTTTCGGCAGCAAGGAATAAGGTGCAAATATGCACTTAAAGCTCTTTGCAGAAAGAAAGGACTTCATGTTGAGGTACTCGTCAATTGATGCTGATGCTTAAACTTTGATATGCATAGAAGTTGCAAAGAATTAGGTTGATCTAGTGCTGTTTCTACTCTTCAAATGATGGTTCTTTTGTAACACTAGTTTGGACTATTAAATTTACTCTTATTCGCGAAACCCCATTTAGAAGTTGAAATCTAGTATTCTGATGTAAATGTTGGCAGTTATTTCGATATCATTTTTTCCCGCTTTAACTTTTTCATTTCAATAAATGTTTGATTGATCATGTCATTATCTTACATTAGAAAAGTTCAGTGAGAAGTGAAATCATAGGTAAAATCGAACATTCTGCTCACGCAATAGCCCATTTGGAATTTTTCATATTTTATGTATCTATCAGTCTTTGGCATACATCTAATATAACATCCACCCTTTTTGCAGAGAGCAAATTTGATTGGAGTTGACAGTCTTGGCATGGATGTCAGAGTTCTCTCTGGAACAGAAGTGTGGACACATCGTTTCCCCTTCAAAGTTAGGGTAAGTAATAGAAAATACTCGACTATATACACTATCCGATGTTGTTTGTAAATGTTGCTTCGTGTTCTGGAAGTGAGCAAAGTAGAACTTGCATATCTATAACAGGATGAGAGACTACTTGCTATTGTGAAGTGTGTTACTTTTAATACACGCCTCATGTCACATGGTAGAACGCTTTTTAGTTAAAACATCTCAAAACAATAGACATTATCCGAGTCATGGGATTTGACTAACTTGAGAAGGCGTTTATCCCTCCCTCGTCTATCCATCAAAGATGAATGAACGGTGACCTTTTTACTGCTTTGGAGACGTTCTAGGCCAAAAACGTTCTTTTCTGTTACATTTCTCTCTGTACGACTAAGTTTATGCGAAGCTTAAAGTAACTGAGATTTTGATTCTTTTTACTATGGCTTCTCTGCAGGCACATTCAGAGATTGCTGCTGAGAAACAGATCCGTCAGCTTCTTTTTCCCAGGTCTCGTCGTAAGAAGTTTAGGACTGCTGAAAGAAGTGGAGATTTGGACTCACTTTAAGTTTAATCTTACTGTTTAGAAGCAGATGTTATGAATAAACATATATTATCTATATATGTTACCAAATAATTGTATGCAGTTAGTTCTCAGTTTTGATTTTCTTTAATGTCGTGATGGATTTGAATTATATATAGTGATCAGTTGAACCCCTTTTGATTAGATATACAAAGATAAAAAGAGAATA</genome_strand>
        <mrna_strand>TTGACGATTACTTCGAG.................................................................................................GGCGAAAGTTCTGAGATGTACGACTATCAAGTTGATTGGGGGATGCCAGATAGTTCTAGCCCGCTGCACCCAGTTTATTTTGCTAAGTGCTTGACTAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTCACATGAAACATGCTAAGATGATGGATCATCCATCAAATGGCATTTCAATTTGGGGACGCCTCAAGCCTGCCTTTCTGGAAGAAGAATATTACGTGCGAAGGCTCTTCAGTGGCGATGAAGTTAGTGACGGCTCCACCTTGGATTGGAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGAAATTTTGAGCTTTAGTTCAAGATATGACAAGAGCCGCACTTTGTCTTCTATCTACAGATTGGAAATCATGAGAGTCGACCTATTTTCTGTGTATGGTGCTCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCAGTAAATTTGTATGACTTCCATGATGCTGAGCCTGACAGTCTTGTATACTCAGCTCCAGCAATTTTAGAGTGGTTTCGGCAGCAAGGAATAAGGTGCAAATATGCACTTAAAGCTCTTTGCAGAAAGAAAGGACTTCATGTTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCAAATTTGATTGGAGTTGACAGTCTTGGCATGGATGTCAGAGTTCTCTCTGGAACAGAAGTGTGGACACATCGTTTCCCCTTCAAAGTTAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................GCACATTCAGAGATTGCTGCTGAGAAACAGATCCGTCAGCTTCTTTTTCCCAGGTCTCGTCGTAAGAAGTTTAGGACTGCTGAAAGAAGTGGAGATTTGGACTCACTTTAAGTTTAATCTTACTGTTTAGAAGCAGATGTTATGAATAAACATATATTATCTATATATGTTACCAAATAATTGTATGCAGTTAGTTCTCAGTTTTGATTTTCTTTAATGTCGTGATGGATTTGAATTATATATAGTGATCAGTTGAACCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U325089" ref_strand="+" ref_description="SGN-U325089        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, hypothetical protein T2J13.20 - Arabidopsis thaliana, PIR:T46116 | chr3:21929432-21933683 FORWARD | Aliases: F25L23.160(evalue: 7e-45, score=177) genbank/nr: gi|18411137|ref|NP_567080.1| expressed protein [Arabidopsis thaliana] gi|15292859|gb|AAK92800.1| unknown protein [Arabidopsis thaliana] gi|20258901|gb|AAM14144.1| unknown protein [Arabidopsis thaliana](evalue: 5e-43, score=177)">
      <seq>cgacaaaaagatcttcgattcaattaacgttttcctcagtttcatatcattaatactctgtttcttgatgttcatctccgcgccttcatcatcaatctccatcggtccctcgcaatgtttcatatgtcatgctgatggaggtagttgctcagcatcattaggagctgcaagcagttggatcaagccatcatacgaggttcagatattctctgaccattcaggtataagtttcaggactgagaaccctttctttggagctgcacaatcgcattggcttgctgtaggacacgagagtagcctttcaagaatttcagttgcagcagattacccagattctgttcctgattcccctaactatgtccgcaacagtggctatcaccctcttgaaggaatgcgagaccagagacgagttcgtgatactgaactcacagctgctgaaatagcaaggacaactgttgaggctaataacaatgcattgttgatattccctggcacggttcattgtgaacctcacgaacaagtgtcatgggcagaatttcagtacgtgattgatgaatatggagacatattctttgaaatttatgatgacaagaatatcttgcggaatcgggatgcaagtaattccgtgaatgcattgattggaatggaattctcccaatacgagaaagggaggntagaatcacctgatgacatcaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="34212" stop="29702"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33912" g_stop="33809" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33808" i_stop="32650" i_length="1159">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32649" g_stop="32526" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="228" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32525" i_stop="31575" i_length="951">
            <donor d_prob="0.741" d_score="1.00"/>
            <acceptor a_prob="0.799" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31574" g_stop="31343" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="460" r_length="232" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31342" i_stop="31210" i_length="133">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31209" g_stop="31107" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="563" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31106" i_stop="31011" i_length="96">
            <donor d_prob="0.829" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="31010" g_stop="30946" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="564" r_stop="628" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="30945" i_stop="30073" i_length="873">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="30072" g_stop="30002" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="629" r_stop="699" r_length="71" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-U325089" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>699</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U325089" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33912" e_stop="33809"/>
          <exon e_start="32649" e_stop="32526"/>
          <exon e_start="31574" e_stop="31343"/>
          <exon e_start="31209" e_stop="31107"/>
          <exon e_start="31010" e_stop="30946"/>
          <exon e_start="30072" e_stop="30002"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGACAAAAAGATCTTCGATTCAATTAACGTTTTCCTCAGTTTCATATCATTAATACTCTGTTTCTTGATGTTCATCTCCGCGCCTTCATCATCAATCTCCATCGGTAATCACTGAAATCATCTTTACTTTTTGATACAAAAGACAGAGGACTCAAAAAGTTTTCTTTTTTTTTTTCGTTCAAGAACCCTTTTTTATGTGCCTGTTAAAAGGGTTATTGATTTTATTCATGTTTTTTCACTTCAATTTTTTGTGGGGTTGACTTTTTATTTGAATAATTAGCACCCATTAGCAATAAATTTGATTTTTTTTGGGTGGTGGGGTGGTGGGGGTGGAGTTTTTTTCTTTCTGGTATACTGCTGTTGTATGTCATAGTTTCTTGTGTTGTCAAGGTGGTAGTATTTTTGAATGTCTGTGGACAAGGAGGTTGTTAGACTTGTCTTAAAATAAGTGTCACTTTAGCTCATTTCACACTCGTCATCAAGAAAAATATTAAATAGAAGAATTGAGCATTATTAACAAGAAGTAGTCTTCCAACATACTAAGTTTTGTATTGAAAGGTGACAATTTTGTTTGCTAAAGTGACAATTATTTTGGGACGGAGGGAGTAAATTCTATTGTAGTGGTTGTTGTTTGTCTTCACTATATTGCCTTAGAGGTTCTGTAATTCCACCAAATCACAAGTTTTGCTTCCTATATCTATAGGGTTAAGAAGAATTTGTGAGAACCACAAACTCTGCCTTTCTTCCTTCTACATTTCTCTGCAAATGAATATTTATGTATATCGTTTGTTGTTTTTCATTGCTTGAAACCCAGATAAGAGAAGGACAACTCTTTGTTAATAGTTTTTTAAAGTGTCATGGGTAACTGAATACCAAATATCTCGTAAACCTTCAACTCAATGAGATGTAGCTACGATTGTGCTATAGGTTTGTTCTCTTTATTTGGTGTTTAATGATGCATATAGAGAGTCTTAACATTCTTGTTTGGAAAGGGTAGGTCTGGGAGGTGGTATTGTGTCTCTTCTGGACCTTTTGAAATAAAAAAACGGAAGAGTTTGGAAGAGGTCTTACTTTTAGGCACAATTGATTAAATTGTTGTCTGATAACCAAAATAAAATTTACATGAAAGCAAGCTTACTTGTTCACATGATCTTAATGAGGGGATGCGTCTTCATTAGGTGTTATCATTTCTTTTTACTTTTTAAGTTTTCTGTGGTCCTTAGTTTGCCTTTTATTTTTAAAAAATATTGGCGACTGTTCCAGGTCCCTCGCAATGTTTCATATGTCATGCTGATGGAGGTAGTTGCTCAGCATCATTAGGAGCTGCAAGCAGTTGGATCAAGCCATCATACGAGGTTCAGATATTCTCTGACCATTCAGGTATAAGGTACATAGCTTGAGAATCCTTTTCCAATAATGACAAAGAAGCTTGACTTGACTGATATTTCTGATCCTCTGGGTTTCTGCTGCTTGTTGACCTAATTACCTTCCATAGTTAACTATTGGTGTTTGTAGTGTAAAATTCTCTTTTTTCTTTGGGAACTCTTAAGTCCGAAGCCAGTTCGTTGGAACCAATATGGCTCTGCTCTTGGAGACTGGTAAGAAGTAAGAACAAGATCAGAAATCATCTTAATCTTCTTGGTCTAGTTAGGAATGATCTCGATTTATTCTATTCCATTCCTCAATGTAATTTTGTTTGGTAAATTATGAGTTAATCTAGATTTTACAAACTCCTAGTTCAGCAAGTCTACTCCTATTCCATATTTGGAACTTACATGGCTATAAGATATTCAACATTTTACTTGTCAAATGGATGTATGGAAGACTGTACAGATGGAAGAAATTTAAATGACTAGTTAGAGAGAGTAGCTTCCTGACCTCCGTTGAGTCGGTCTTTTCCAATCCAAGTCAGCAACTCAGCACCATTTTCTACCTTCAGGCTATCACCAACCATTACTTCCCATATTTCCAGAACGCCTAGATGCTTGAGACTTCGCCAGAAAAACCCATCACCCAAAGAGGCAGGTGTAATAACTTTACCACTACTAGAGATGATTGTTTAGTCAAGTACTCTTTGAAAGATATTAGTTTTCTGCATATGGAGACTCTAGTTGTGTGCACTTTGTATTGATATTTACTTCCCAAATGCATTTGTGAACTTTGTATTGCTGTCGTGTTCTCTTTATTATTTTACCATAGTTCTCAAAAAAAAAAAAACACTCTAACCTTTTCACCTTTTTTACTGAAGGAAAAAAGTTTACTATTCTGGTTCTACTGTAGTTTGGCTTTTTCCAGATGAAACTATGTGTTCTTACACATGTGCTCCTCTCCTGTATAGTTTCAGGACTGAGAACCCTTTCTTTGGAGCTGCACAATCGCATTGGCTTGCTGTAGGACACGAGAGTAGCCTTTCAAGAATTTCAGTTGCAGCAGATTACCCAGATTCTGTTCCTGATTCCCCTAACTATGTCCGCAACAGTGGCTATCACCCTCTTGAAGGAATGCGAGACCAGAGACGAGTTCGTGATACTGAACTCACAGCTGCTGAAATAGCAAGGACAACTGTTGAGGTTTGCGCTAATATATGCTATATAAATTAGATATTGTTCATTCTACATGCAAGTGAAAAAAGTTTGCATGGTATAAGTACGATTATATTTCTTTTGGATGGCTCAGATGGGGTATTTTTATTTCTAATTGTAGGCTAATAACAATGCATTGTTGATATTCCCTGGCACGGTTCATTGTGAACCTCACGAACAAGTGTCATGGGCAGAATTTCAGTACGTGATTGATGAATATGGAGGTTTGTCTGTTTCTGTTGCAGTGTGTCTCACAGTGTTGTAATTTGATCATTTCCCTTATTATGTTCATATTTGATGGTTTGCTTTCATGTGCTCAGACATATTCTTTGAAATTTATGATGACAAGAATATCTTGCGGAATCGGGATGCAAGTAATTCCGTGGTACATATTTCTACTTTTATTTATATTTTGTCTTTCACAGTTAATATCAGATCATGGTTGAGCTTTATCTCGTTAGACATTGTGATTAGTATTTTCATATACCTATTAAAAATTGTGACTAGTATCTTCACAACTCATAAGCATGTCCTCTGAATTCACCAAGTTCTTATTTATGCGGTGCAGTTATAATCCCTTGGCGTCTTATTTGGCTGCGTGTTGTCATATCTCTATTAGTTATTGTCTTAAGGATCATACATGAACTGATGAGATCGCTAACAACTAACACCTATACCTTGGGTTGTTTTAATTAATTGTCACTTCATCATTTCTAAGGCTACTCGTAACAAAAAGTGTTGGGGTATCATGACTTTTAACACCTTTAACCATTATAGTGTTGAACCTGAAAATTGTTGCATTTGGAAGTCCGTGTAAGAAATGACTAAACTATCTCGATGATCTCTCACTTTATCCTCTTTGTACTTTTTCTTTCCATAGGGATGTGATTGGATCAAATAGCTTTACGCTAGTTGTCAACCTACCGCAACTCCATTTTATCCAGACTAGGGATTGACATAAGAATACAAAGCTCACACAGTCGGACTTAATGGCTTTAATATGTTTTTCTTCCCTTTAATTTTATTTCCTCCTATCAATATATTAATGGAAGTTCTTCCTTGGGCTTTATGTGAGCTGGCTAGTGTCTCGTTTTTGACATTGAGATGTTGAATTAGACTTGTCTTGAGGTTGATAAGCGACTGTTGAAGAATGTGTTATGTGGAATTTGAGTCGTAAGAGTGTAGATCTGTAGTGAAATATATGTCTGTAGGTCAGTGCTGAAATCTCTACCATCCCTATTTTACTGGATTATTTCAGAATGCATTGATTGGAATGGAATTCTCCCAATACGAGAAGAGGAGGGTAGAATCACCTGATGACATCAATTT</genome_strand>
        <mrna_strand>CGACAAAAAGATCTTCGATTCAATTAACGTTTTCCTCAGTTTCATATCATTAATACTCTGTTTCTTGATGTTCATCTCCGCGCCTTCATCATCAATCTCCATCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCTCGCAATGTTTCATATGTCATGCTGATGGAGGTAGTTGCTCAGCATCATTAGGAGCTGCAAGCAGTTGGATCAAGCCATCATACGAGGTTCAGATATTCTCTGACCATTCAGGTATAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGGACTGAGAACCCTTTCTTTGGAGCTGCACAATCGCATTGGCTTGCTGTAGGACACGAGAGTAGCCTTTCAAGAATTTCAGTTGCAGCAGATTACCCAGATTCTGTTCCTGATTCCCCTAACTATGTCCGCAACAGTGGCTATCACCCTCTTGAAGGAATGCGAGACCAGAGACGAGTTCGTGATACTGAACTCACAGCTGCTGAAATAGCAAGGACAACTGTTGAG.....................................................................................................................................GCTAATAACAATGCATTGTTGATATTCCCTGGCACGGTTCATTGTGAACCTCACGAACAAGTGTCATGGGCAGAATTTCAGTACGTGATTGATGAATATGGAG................................................................................................ACATATTCTTTGAAATTTATGATGACAAGAATATCTTGCGGAATCGGGATGCAAGTAATTCCGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCATTGATTGGAATGGAATTCTCCCAATACGAGAAAGGGAGGNTAGAATCACCTGATGACATCAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U338145" ref_strand="+" ref_description="SGN-U338145        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 8e-06, score=52)">
      <seq>aaaagatcttcgattcaattaacgttttcctcagtttcaggtcattaatactctgtttcttgatgttcatctccgcgccttcatcatcaatctccatcggtccctcgcaatgtttcatatgtcatgctgatggaggtagttgctcagcatcattaggagctgcaagcagttggatcaagccatcatacgaggttcagatattctctgaccattcagtttcaggactgagaaccctttctttggagctgcacaatcgcattggcttgctgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="34207" stop="31221"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33907" g_stop="33809" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33808" i_stop="32650" i_length="1159">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32649" g_stop="32533" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="216" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32532" i_stop="31575" i_length="958">
            <donor d_prob="0.887" d_score="1.00"/>
            <acceptor a_prob="0.799" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31574" g_stop="31521" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="270" r_length="54" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-U338145" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>270</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U338145" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33907" e_stop="33809"/>
          <exon e_start="32649" e_stop="32533"/>
          <exon e_start="31574" e_stop="31521"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGATCTTCGATTCAATTAACGTTTTCCTCAGTTTCATATCATTAATACTCTGTTTCTTGATGTTCATCTCCGCGCCTTCATCATCAATCTCCATCGGTAATCACTGAAATCATCTTTACTTTTTGATACAAAAGACAGAGGACTCAAAAAGTTTTCTTTTTTTTTTTCGTTCAAGAACCCTTTTTTATGTGCCTGTTAAAAGGGTTATTGATTTTATTCATGTTTTTTCACTTCAATTTTTTGTGGGGTTGACTTTTTATTTGAATAATTAGCACCCATTAGCAATAAATTTGATTTTTTTTGGGTGGTGGGGTGGTGGGGGTGGAGTTTTTTTCTTTCTGGTATACTGCTGTTGTATGTCATAGTTTCTTGTGTTGTCAAGGTGGTAGTATTTTTGAATGTCTGTGGACAAGGAGGTTGTTAGACTTGTCTTAAAATAAGTGTCACTTTAGCTCATTTCACACTCGTCATCAAGAAAAATATTAAATAGAAGAATTGAGCATTATTAACAAGAAGTAGTCTTCCAACATACTAAGTTTTGTATTGAAAGGTGACAATTTTGTTTGCTAAAGTGACAATTATTTTGGGACGGAGGGAGTAAATTCTATTGTAGTGGTTGTTGTTTGTCTTCACTATATTGCCTTAGAGGTTCTGTAATTCCACCAAATCACAAGTTTTGCTTCCTATATCTATAGGGTTAAGAAGAATTTGTGAGAACCACAAACTCTGCCTTTCTTCCTTCTACATTTCTCTGCAAATGAATATTTATGTATATCGTTTGTTGTTTTTCATTGCTTGAAACCCAGATAAGAGAAGGACAACTCTTTGTTAATAGTTTTTTAAAGTGTCATGGGTAACTGAATACCAAATATCTCGTAAACCTTCAACTCAATGAGATGTAGCTACGATTGTGCTATAGGTTTGTTCTCTTTATTTGGTGTTTAATGATGCATATAGAGAGTCTTAACATTCTTGTTTGGAAAGGGTAGGTCTGGGAGGTGGTATTGTGTCTCTTCTGGACCTTTTGAAATAAAAAAACGGAAGAGTTTGGAAGAGGTCTTACTTTTAGGCACAATTGATTAAATTGTTGTCTGATAACCAAAATAAAATTTACATGAAAGCAAGCTTACTTGTTCACATGATCTTAATGAGGGGATGCGTCTTCATTAGGTGTTATCATTTCTTTTTACTTTTTAAGTTTTCTGTGGTCCTTAGTTTGCCTTTTATTTTTAAAAAATATTGGCGACTGTTCCAGGTCCCTCGCAATGTTTCATATGTCATGCTGATGGAGGTAGTTGCTCAGCATCATTAGGAGCTGCAAGCAGTTGGATCAAGCCATCATACGAGGTTCAGATATTCTCTGACCATTCAGGTATAAGGTACATAGCTTGAGAATCCTTTTCCAATAATGACAAAGAAGCTTGACTTGACTGATATTTCTGATCCTCTGGGTTTCTGCTGCTTGTTGACCTAATTACCTTCCATAGTTAACTATTGGTGTTTGTAGTGTAAAATTCTCTTTTTTCTTTGGGAACTCTTAAGTCCGAAGCCAGTTCGTTGGAACCAATATGGCTCTGCTCTTGGAGACTGGTAAGAAGTAAGAACAAGATCAGAAATCATCTTAATCTTCTTGGTCTAGTTAGGAATGATCTCGATTTATTCTATTCCATTCCTCAATGTAATTTTGTTTGGTAAATTATGAGTTAATCTAGATTTTACAAACTCCTAGTTCAGCAAGTCTACTCCTATTCCATATTTGGAACTTACATGGCTATAAGATATTCAACATTTTACTTGTCAAATGGATGTATGGAAGACTGTACAGATGGAAGAAATTTAAATGACTAGTTAGAGAGAGTAGCTTCCTGACCTCCGTTGAGTCGGTCTTTTCCAATCCAAGTCAGCAACTCAGCACCATTTTCTACCTTCAGGCTATCACCAACCATTACTTCCCATATTTCCAGAACGCCTAGATGCTTGAGACTTCGCCAGAAAAACCCATCACCCAAAGAGGCAGGTGTAATAACTTTACCACTACTAGAGATGATTGTTTAGTCAAGTACTCTTTGAAAGATATTAGTTTTCTGCATATGGAGACTCTAGTTGTGTGCACTTTGTATTGATATTTACTTCCCAAATGCATTTGTGAACTTTGTATTGCTGTCGTGTTCTCTTTATTATTTTACCATAGTTCTCAAAAAAAAAAAAACACTCTAACCTTTTCACCTTTTTTACTGAAGGAAAAAAGTTTACTATTCTGGTTCTACTGTAGTTTGGCTTTTTCCAGATGAAACTATGTGTTCTTACACATGTGCTCCTCTCCTGTATAGTTTCAGGACTGAGAACCCTTTCTTTGGAGCTGCACAATCGCATTGGCTTGCTGT</genome_strand>
        <mrna_strand>AAAAGATCTTCGATTCAATTAACGTTTTCCTCAGTTTCAGGTCATTAATACTCTGTTTCTTGATGTTCATCTCCGCGCCTTCATCATCAATCTCCATCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCTCGCAATGTTTCATATGTCATGCTGATGGAGGTAGTTGCTCAGCATCATTAGGAGCTGCAAGCAGTTGGATCAAGCCATCATACGAGGTTCAGATATTCTCTGACCATTCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGGACTGAGAACCCTTTCTTTGGAGCTGCACAATCGCATTGGCTTGCTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U343479" ref_strand="+" ref_description="SGN-U343479        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, and genefinder | chr2:17984305-17986685 FORWARD | Aliases: F14B2.19(evalue: 2e-50, score=196) genbank/nr: gi|15224253|ref|NP_181854.1| expressed protein [Arabidopsis thaliana] gi|25408850|pir||H84863 hypothetical protein At2g43250 [imported] - Arabidopsis thaliana gi|3763934|gb|AAC64314.1| hypothetical protein [Arabidopsis thaliana](evalue: 1e-48, score=196)">
      <seq>cccattatgagcagtattaagtccattagagtttagttttcttgatgttaattgtgggtttaatcgattcttgatgcattagctgttaatggtcatgcggggttttagctatttgcaaaatctgtggcctttttctgtattaaaccccactgatttgagaatttcagatgggtttgtgaggaaattaggaatacccgaaactaccaaacagttcgtttatgcaattcaagaacctgaatccaaggctgttatatacgtattgtgtgtgcagaatttatctgagcgatctgctctagatgcggagtgtttgattagggaagttaagcctgaggctgtagttgtccaagtgggtaattctggagatggtcatgaaaatgagggaattgggttgagtgatggtggtgatttagaggaggaggaggagtcggtaccaacttcgtcgattgaggttttgaagaggtgttttgtgcataaaactagtaaggagaagtatgagaatatggcggggcgagttgttttgagagagatatttggggttgggtttgatgggcatttccctgctgccaagaaagcagctgaagaggttggttcggctttcttgttgcttgagtcaccgtttgttcaatgcagtttgtctggtgagccttctgatgtgggggatgaggggttcgagaataagtttggagtgtttggtttggaggacgggtatgagaataggtttggagtgtttggcttagaggctagtaatagtttggttcctctaaggacagggtta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="36176" stop="37549"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36475" g_stop="37249" g_length="775"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="775" r_length="775" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-U343479" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>775</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U343479" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36475" e_stop="37249"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCATAATCATCAGTATTAAGTCCATTAGAGTTTAGTTTTCTTGATGTTAATTGTGGGTTTAATCGATTCTTGATGCATTAGCTGTTAATGGTCATGCGGGGTTTTAGCTATTTGCAAAATCTGTGGCCTTTTTCTGTATTAAACCCCACTGATTTGAGAATTTCAGATGGGTTTGTGAGGAAATTAGGAATACCCGAAACTACCAAACAGTTCGTTTATGCAATTCAAGAACCTGAATCCAAGGCTGTTATATACGTATTGTGTGTGCAGAATTTATCTGAGCGATCTGCTCTAGATGCGGAGTGTTTGATTAGGGAAGTTAAGCCTGAGGCTGTAGTTGTCCAAGTGGGTAATTCTGGAGATGGTCATGAAAATGAGGGAATTGGGTTGAGTGATGGTGGTGATTTAGAGGAGGAGGAGGAGTCGGTACCAACTTCGTCGATTGAGGTTTTGAAGAGGTGTTTTGTGCATAAAACTAGTAAGGAGAAGTATGAGAATATGGCGGGGCGAGTTGTTTTGAGAGAGATATTTGGGGTTGGGTTTGATGGGCATTTCCCTGCTGCCAAGAAAGCAGCTGAAGAGGTTGGTTCGGCTTTCTTGTTGCTTGAGTCACCGTTTGTTCAATGCAGTTTGTCTGGTGAGCCTTCTGATGTGGGGGATGAGGGGTTCGAGAATAAGTTTGGAGTGTTTGGTTTGGAGGACGGGTATGAGAATAGGTTTGGAGTGTTTGGCTTAGAGGCTAGTAATAGTTTGGTTCCTCTAAGGACAGGGTTA</genome_strand>
        <mrna_strand>CCCATTATGAGCAGTATTAAGTCCATTAGAGTTTAGTTTTCTTGATGTTAATTGTGGGTTTAATCGATTCTTGATGCATTAGCTGTTAATGGTCATGCGGGGTTTTAGCTATTTGCAAAATCTGTGGCCTTTTTCTGTATTAAACCCCACTGATTTGAGAATTTCAGATGGGTTTGTGAGGAAATTAGGAATACCCGAAACTACCAAACAGTTCGTTTATGCAATTCAAGAACCTGAATCCAAGGCTGTTATATACGTATTGTGTGTGCAGAATTTATCTGAGCGATCTGCTCTAGATGCGGAGTGTTTGATTAGGGAAGTTAAGCCTGAGGCTGTAGTTGTCCAAGTGGGTAATTCTGGAGATGGTCATGAAAATGAGGGAATTGGGTTGAGTGATGGTGGTGATTTAGAGGAGGAGGAGGAGTCGGTACCAACTTCGTCGATTGAGGTTTTGAAGAGGTGTTTTGTGCATAAAACTAGTAAGGAGAAGTATGAGAATATGGCGGGGCGAGTTGTTTTGAGAGAGATATTTGGGGTTGGGTTTGATGGGCATTTCCCTGCTGCCAAGAAAGCAGCTGAAGAGGTTGGTTCGGCTTTCTTGTTGCTTGAGTCACCGTTTGTTCAATGCAGTTTGTCTGGTGAGCCTTCTGATGTGGGGGATGAGGGGTTCGAGAATAAGTTTGGAGTGTTTGGTTTGGAGGACGGGTATGAGAATAGGTTTGGAGTGTTTGGCTTAGAGGCTAGTAATAGTTTGGTTCCTCTAAGGACAGGGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U329080" ref_strand="+" ref_description="SGN-U329080        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, and genefinder | chr2:17984305-17986685 FORWARD | Aliases: F14B2.19(evalue: 1e-83, score=306) genbank/nr: conserved(evalue: 2e-84, score=315)">
      <seq>atagctttgaacaatgctggtcggctcccacttagcaaaatggggagtcatacaactgaattttctgagctttgtattgaggacaagtcccacgcccttcttgcacaggccctccgaagccagaccgagaagttcaaatcaatagttgcagtagtagatgccagtggcttagctggactaaggaagcactggagtgttaatgtacctgaggaagttaaggaaattgttgatcagctggtcactgactctgaaaacgatggggacaattcaagccaaagtgacaaaaaagggttactagctgttaagccagtggtagctgttggggctggtgcaactgcagttctgggagcttcttcattttctaaagttgttcctgcatctacaatattgaaggttgtcaccttcaaagtccccgcttctctaaaaatcatgattactcaaacccaaaaggcccttgctcttgcatttggaaagtcaaacgtagcaggccctgcaatggcaagttctggtgtcaaatcatctgtccttaaggcaactgcttctgcagagaaaatccgtgccatggcgcatggcgttatagcctctgcagagaaaactagcatctcagccatgagaacggcattctacgaaatcatgaggaaacaccgagtacgacccgttggctttctgccatgggccacctttggatgcagtgtagttacttgtgcgagcttgcttgtgtatggagatggaatagaatgtgctgctgaatctcttccagcagctccttcaatcgccagtttgggtcgtggaatccaaagtttgcatcaagcttccctggcagtgaaacaaacagaaaattccaggatacaaaagtcaatagagtctcttgtgtacagatttaagaagataagtatctcataaagtgttcagttcctttctcaagtacatgagtcaatagttgagctctaactttttcattcaaatagattttagcaaagaggttgtgcaatttctgatacctgggatttgtctgtagcatggcaagaagttccaataaaatgtgattggagtttggatgatttttcaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="37286" stop="38956"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37586" g_stop="38655" g_length="1070"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1070" r_length="1070" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-U329080" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1070</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U329080" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37586" e_stop="38655"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAGCTTTGAACAATGCTGGTCGGCTCCCACTTAGCAAAATGGGGAGTCATACAACTGAATTTTCTGAGCTTTGTATTGAGGACAAGTCCCACGCCCTTCTTGCACAGGCCCTCCGAAGCCAGACCGAGAAGTTCAAATCAATAGTTGCAGTAGTAGATGCCAGTGGCTTAGCTGGACTAAGGAAGCACTGGAGTGTTAATGTACCTGAGGAAGTTAAGGAAATTGTTGATCAGCTGGTCACTGACTCTGAAAACGATGGGGACAATTCAAGCCAAAGTGACAAAAAAGGGTTACTAGCTGTTAAGCCAGTGGTAGCTGTTGGGGCTGGTGCAACTGCAGTTCTGGGAGCTTCTTCATTTTCTAAAGTTGTTCCTGCATCTACAATATTGAAGGTTGTCACCTTCAAAGTCCCCGCTTCTCTAAAAATCATGATTACTCAAACCCAAAAGGCCCTTGCTCTTGCATTTGGAAAGTCAAACGTAGCAGGCCCTGCAATGGCAAGTTCTGGTGTCAAATCATCTGTCCTTAAGGCAACTGCTTCTGCAGAGAAAATCCGTGCCATGGCGCATGGCGTTATAGCCTCTGCAGAGAAAACTAGCATCTCAGCCATGAGAACGGCATTCTACGAAATCATGAGGAAACACCGAGTACGACCCGTTGGCTTTCTGCCATGGGCCACCTTTGGATGCAGTGTAGTTACTTGTGCGAGCTTGCTTGTGTATGGAGATGGAATAGAATGTGCTGCTGAATCTCTTCCAGCAGCTCCTTCAATCGCCAGTTTGGGTCGTGGAATCCAAAGTTTGCATCAAGCTTCCCTGGCAGTGAAACAAACAGAAAATTCCAGGATACAAAAGTCAATAGAGTCTCTTGTGTACAGATTTAAGAAGATAAGTATCTCATAAAGTGTTCAGTTCCTTTCTCAAGTACATGAGTCAATAGTTGAGCTCTAACTTTTTCATTCAAATAGATTTTAGCAAAGAGGTTGTGCAATTTCTGATACCTGGGATTTGTCTGTAGCATGGCAAGAAGTTCCAATAAAATGTGATTGGAGTTTGGATGATTTTTCAAC</genome_strand>
        <mrna_strand>ATAGCTTTGAACAATGCTGGTCGGCTCCCACTTAGCAAAATGGGGAGTCATACAACTGAATTTTCTGAGCTTTGTATTGAGGACAAGTCCCACGCCCTTCTTGCACAGGCCCTCCGAAGCCAGACCGAGAAGTTCAAATCAATAGTTGCAGTAGTAGATGCCAGTGGCTTAGCTGGACTAAGGAAGCACTGGAGTGTTAATGTACCTGAGGAAGTTAAGGAAATTGTTGATCAGCTGGTCACTGACTCTGAAAACGATGGGGACAATTCAAGCCAAAGTGACAAAAAAGGGTTACTAGCTGTTAAGCCAGTGGTAGCTGTTGGGGCTGGTGCAACTGCAGTTCTGGGAGCTTCTTCATTTTCTAAAGTTGTTCCTGCATCTACAATATTGAAGGTTGTCACCTTCAAAGTCCCCGCTTCTCTAAAAATCATGATTACTCAAACCCAAAAGGCCCTTGCTCTTGCATTTGGAAAGTCAAACGTAGCAGGCCCTGCAATGGCAAGTTCTGGTGTCAAATCATCTGTCCTTAAGGCAACTGCTTCTGCAGAGAAAATCCGTGCCATGGCGCATGGCGTTATAGCCTCTGCAGAGAAAACTAGCATCTCAGCCATGAGAACGGCATTCTACGAAATCATGAGGAAACACCGAGTACGACCCGTTGGCTTTCTGCCATGGGCCACCTTTGGATGCAGTGTAGTTACTTGTGCGAGCTTGCTTGTGTATGGAGATGGAATAGAATGTGCTGCTGAATCTCTTCCAGCAGCTCCTTCAATCGCCAGTTTGGGTCGTGGAATCCAAAGTTTGCATCAAGCTTCCCTGGCAGTGAAACAAACAGAAAATTCCAGGATACAAAAGTCAATAGAGTCTCTTGTGTACAGATTTAAGAAGATAAGTATCTCATAAAGTGTTCAGTTCCTTTCTCAAGTACATGAGTCAATAGTTGAGCTCTAACTTTTTCATTCAAATAGATTTTAGCAAAGAGGTTGTGCAATTTCTGATACCTGGGATTTGTCTGTAGCATGGCAAGAAGTTCCAATAAAATGTGATTGGAGTTTGGATGATTTTTCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U319629" ref_strand="+" ref_description="SGN-U319629        Tomato 200607 #1 [13 ESTs aligned] arabidopsis/peptide: | Symbol: None | biotin synthase (BioB) (BIO2), identical to SP:P54967 Pfam profile PF04055: radical SAM domain protein | chr2:18017828-18020315 REVERSE | Aliases: T1O24.10(evalue: 1e-163, score=572) genbank/nr: gi|15224273|ref|NP_181864.1| biotin synthase (BioB) (BIO2) [Arabidopsis thaliana] gi|1705463|sp|P54967|BIOB_ARATH Biotin synthase (Biotin synthetase) gi|2129547|pir||S71201 biotin synthase (EC 2.8.1.6) bioB [similarity] - Arabidopsis thaliana gi|1045316|gb|AAA80226.1| biotin sythase gi|1403662|gb|AAC49445.1| BIO2 protein gi|1769457|gb|AAB39953.1| biotin synthase [Arabidopsis thaliana] gi|2288983|gb|AAB64312.1| biotin synthase (Bio B) [Arabidopsis thaliana] gi|1589016|prf||2209438A biotin synthase(evalue: 1e-161, score=572)">
      <seq>tgagaaaaaaggcaagcaaatagcaattgaaagctgctctgttttgcttcacctatctgcttctgcaaatccggccatttctgtgtatatatatagatagaaggtgaaaaggatgatgtgggttcgatcgattcggcggccattatcgtcgttggttctacttcagtcgcgtgccccgaattattcctcattgtcagcttcagcagctgcagtagaagcggaacgatgtataaaggaaggacccagaaataactggactagagatgaaatcaagtctatttacgattcaccactcctcgatctcctctttcatggcgctcaagtacatagacattctcataactttagagaagtacagcagtgcactttgctgtctattaagacagggggatgcagtgaagattgttcgtattgtcctcaatcgtctaggtacaacacaggactgaaagcacagaaacttatgaataaggatgcagtcttggaagcagcaagaaaggcaaaagagggaggtagcactcgtttttgtatgggtgctgcatggagggatacaataggaaggaaaaccaatatgaaccagatcgtcgagtatgtgaaggaaataagggacatgggaatggaggtttgctgcaccttgggaatgcttgagaagcagcaagctttagagctcaagaaagctggtctaacagcatacaatcacaatcttgacacctcaagagaatactatcctaatattataaccactagaacttatgatgagcggctggaaactcttaagcatgtacgcgaagcaggaattaatgtgtgttcaggtggaataatagggctcggtgaggctgaagaggatagaattggtttgttgcataccctgtcaactcttccaactcaccctgagagtgtgccgattaatgcacttattgcagtaaaaggtacaccattggaagaccagaagccagtggacatatgggatatgattaggatgatttcgacagcaagaataacaatgccaggtgcaatggttaggctttctgcaggaagagttcgtttttctgtccccgagcaggctctttgtttccttgctggtgccaattccatctttacaggtgagaagttgttgactacaccaaataatgactatgatgctgatcagaatatgttcaaattacttggacttgttcctaaagctccaaatttctctgaggatgaaaaagattctgaagacgaaaagatggaagcatctgtttagactttagtttagttcattctgtaatgatcaaccagagatctatctttttacttaaatgtatgactctcctcttgaaattttaccatgattctaagctttttaatgtacctaccatgttttcattaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaanaaanannncctcgggggggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="47690" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47990" g_stop="48305" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="316" r_length="316" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48306" i_stop="49413" i_length="1108">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49414" g_stop="49593" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="496" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49594" i_stop="49967" i_length="374">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49968" g_stop="50074" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="497" r_stop="603" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50075" i_stop="51305" i_length="1231">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51306" g_stop="51511" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="604" r_stop="809" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51512" i_stop="52105" i_length="594">
            <donor d_prob="0.739" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="52106" g_stop="52245" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="810" r_stop="949" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="52246" i_stop="52875" i_length="630">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="52876" g_stop="53293" g_length="418"/>
          <reference_exon_boundary r_type="cDNA" r_start="950" r_stop="1367" r_length="418" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="53294" i_stop="54756" i_length="1463">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.62"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="54757" g_stop="54818" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1368" r_stop="1429" r_length="62" r_score="0.548"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-U319629" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>1429</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U319629" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47990" e_stop="48305"/>
          <exon e_start="49414" e_stop="49593"/>
          <exon e_start="49968" e_stop="50074"/>
          <exon e_start="51306" e_stop="51511"/>
          <exon e_start="52106" e_stop="52245"/>
          <exon e_start="52876" e_stop="53293"/>
          <exon e_start="54757" e_stop="54818"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGAAAAAAGGCAAGCAAATAGCAATTGAAAGCTGCTCTGTTTTGCTTCACCTATCTGCTTCTGCAAATCCGGCCATTTCTGTGTATATATATAGATAGAAGGTGAAAAGGATGATGTGGGTTCGATCGATTCGGCGGCCATTATCGTCGTTGGTTCTACTTCAGTCGCGTGCCCCGAATTATTCCTCATTGTCAGCTTCAGCAGCTGCAGTAGAAGCGGAACGATGTATAAAGGAAGGACCCAGAAATAACTGGACTAGAGATGAAATCAAGTCTATTTACGATTCACCACTCCTCGATCTCCTCTTTCATGGCGTCCGTATTCTCTTCTCTCTCCTTTTGTTTTTAATTTAATTATGTTTGATTTTGAATCATTTGGGTCACTGCATTGGTTCTATTTTGTGAAGCTTTGTCTATAGTTAATTGGCTTTACTATACATCAATCACAAAAATAGTATTTTTTTAAATCTATGGGGGGTTTTGTTCTGAGGTTTAGCAAGGGTGTTTTTGGTTTGATTTTCTGTTACTGTGCTTATGTGCAGTTGATTTTTTGTATGGCAGAAATATTGATGGAACAAACATTTTGGATTACCTTGAGTACTGAAAGAAAGAAATGTCTTTCATCATTTTTCTTTACAAACATCTTAGATGGAAATATTTTTGTGGATCATTTTCAGTGTTTGGTGGGATGTAGAAGTAGGTGACAACATGATAATTGTACAAAGTGTAGGATAGGTTTGTTGTTGTTGTTAGGTACTCTTCTCTGTCCAATTGTTGTGCACTTTTGACTTGGCACAGGGATTAAAAAGTAGTAGCTATTAAATTTAAGTCATGTAAACACTGATAAATGAATGCTATTTAAAAGCAAGGTTAAAATAGACACGAAATGGTAAATTATTCGTTGATTTTATAATTGTTGGACATCCCAAAACAGTATAGTGGACAAGTAAAGATGGACGGAGGGAGTATTAAACGGTTTTAACAATGCCTAGGTGTTGATTGAGACAAATGAAATTAGATCAGTTGAGAAATTTGTTAAGAGAGTGTTTTTCACCCATAAGAGTGAGGAAATATTTTCCTAATTGTGGTGGAAGACATCTTCCTTGAAAAAATGTTTTTGAGGGTAACATTCTCCCATTGTATCAGATATAATTGATTTACAAATATCTCAATTCTTACAACATATGAATACTTCAATCAACACATTATCAACCTTTAACTCAAAATGCTAAATGCTATCCCACTGACCTGAAATTTTTATGATTCATGCCAAAAAAACAACTGAAGAATGTGTTTCTTTTAATTTCTGTTTCTAATTACTTTGGAGCTTGCACCTTAATTGTTTTCTGTTAGTTTAGTGAGGCTCTCTAATTTCTGGTTATGATACTTTTTCATTTTCATGAAAAAAAATATTATTTTACAGGCTCAAGTACATAGACATTCTCATAACTTTAGAGAAGTACAGCAGTGCACTTTGCTGTCTATTAAGACAGGGGGATGCAGTGAAGATTGTTCGTATTGTCCTCAATCGTCTAGGTACAACACAGGACTGAAAGCACAGAAACTTATGAATAAGGATGCAGTCTTGGAAGCAGCAAGAAAGGTGCTCTCTTTCTGTTTCTCTTGTCTGATTTTGTGAAATATTTCACCTAAGCAAAGTAGATATTCTTTAACCCTTGACTGAAACTAGGGTGACATGAGTTCTTCCCAATAGGTTCCGTTTAATCAAATGCTACACATCCCAAGTGAGTTATGTGTTCTCAAGACCTTAGAGTTACCTGGATTCTTCCCCTTTTACCATGGTGGCCAAGGATGTAATGTGATCTAGGCCAACCTGTAGATGTATAAACATGACAGATAAATGCTGTAACGGTGAATTATCCCAGTTAATTAGATTTCATTTGACTATTATACATAACATACAATGAGGTTCAATCTTGTTTGTAATGCACTTTTAGCTACTTTATGCATTGACAGGCAAAAGAGGGAGGTAGCACTCGTTTTTGTATGGGTGCTGCATGGAGGGATACAATAGGAAGGAAAACCAATATGAACCAGATCGTCGAGTATGTGAAGGAAATAAGGTAATGAGCTATAGTTATATTTTTCATTCCAGTGCCTTGGATGATCTCTTCTGATCTTTTTGTTTTCTTTTTCTGATTATGTTTATTTTATTGGTTATGGGAACCTCATGTATACAAGCAGTATAGAATTTTTAAAGCCAATCGATTGCTGTATATGGTGTTATGAACCACTAGAATGTGTTGGGCAAAGGAAAATGCCTGTTTCTGCCTTTTATTGTGGGGGTTGGGTAAAGATTACCATGGTTCATCTTAAAATGTCTAAGCTGTGGGAGGCAATATCTAACAGATTTACGTTTAGGACAGAAGGATATGGTGCTAAATTTTCTTGTAAAAGACACCTGTTTCATGAACTTCAATATCTACTGATACCAACCATTCGCAGATACCATCCTTATTTTCAAACTGTGAGATGTTTCTGGCATTCTGAAATCTCCTTCAGTTTCTGTTTGACAAATAAGCGGAGCTAGTACCTTGCCACAATTTGATTTACCTAGTAATGGTCAAAAGACTTAATGACTAAGCATTAGGAGTCAAAAGTTATATAGGAAAAGAAACAACTCTCTCTATTTACCTTCAATCATGAGGTGAACACTAATTTGAGAAACATATGAGTTAACTCATAAAAGAGACAAGAATCTAGAAACAATAGGCCTCTTGATATTTTGTTAGTTTAAACTAATTCGAATATATCAAGTATCAGACAACTGTAGGCTGGTTAGATGCTGAGGACAGTATTGCAGGGCCTTGTTGTCTATTTTGTTATTTCCTTGTAGCTTTGAAGTTTAAAGAGTGAGGAAACTGGAGTTACGATGATCTCTGAAATTGAGAAGCATTTCTTCTGCTTCGTAGAATGACTACAGAAGCAAGCAGGATTAGGTTTACTAATTAATTGGTTAAACATTAGACCATCTGTTACCCATTCTAAAAGCTTTCTTCCTCGCAAGAAACTTTCATGAGTAGTTCTGTGATTGTGCAACTTCTAATCAAAAACACCACATTTTCTTCTTAGTCCTTGTTTGTGGGTTGTGGCAATAACGCATACCCAAATATTGTTTATTGAAGTTAAACAAAAAATAACAGAAAAACTATAGACTATCAATTGCCATCATGTTTACATGTAATGCACAAACAAGTTGAAAATGTTTCACTATGACATGACAACAACTGAGGCATCCATTGATTTTGTTCTGCCCAATTATTTAATGTTGTGCAAATTATTCTCAATATGAAGGGACATGGGAATGGAGGTTTGCTGCACCTTGGGAATGCTTGAGAAGCAGCAAGCTTTAGAGCTCAAGAAAGCTGGTCTAACAGCATACAATCACAATCTTGACACCTCAAGAGAATACTATCCTAATATTATAACCACTAGAACTTATGATGAGCGGCTGGAAACTCTTAAGCATGTACGCGAAGCAGGAATTAATGTGTGTTCAGGTATTCGTTGAAGTATAAAATAATGTTGTGTTTATATATTGACACTTGTGACTCATTGGAATAACAAATTAACAATATGTAGAACCATCAATCTAGACTCTATATTTGATGCATGCATGTTCATGTATATGCAAATACTGAAGTATCACATTATTGGGTGTATACCACCACATATAGTGAGTTGAAACGATTTGATTATAAGTGCAATGTCATTGGCAGCTAAGATCTTTTGAGCAGCCTTAAAGCCTCTTGATGAGAACATAAAACTGATTTTCTTTAGGACATGAAAGTGAACCCTACTTCAAGTATTTTGACATGAGTTCTAATTTCTAAATTGTTAGTAAAAGGTCTTTCAGACCTTTCAATTTGAACTTCTTACTGTTTTTCTTCTTTATGACTTCCTGTTCATAGATAGACGAATCATTAATAATTGTTGGTAGGGTATTCTTAATTGTTATTTTATTATTGGAAGTTAAGGGAATGATTGAAAAATAGTCAGTTGTGTTTGTTTTGACATAGGTTGTGTAGTAAAAAATCTTCATGATGTGCCAATCCTCATCAAAATCTTGCTAACCTCTTATTTTCTTCGATCAGGTGGAATAATAGGGCTCGGTGAGGCTGAAGAGGATAGAATTGGTTTGTTGCATACCCTGTCAACTCTTCCAACTCACCCTGAGAGTGTGCCGATTAATGCACTTATTGCAGTAAAAGGTACACCATTGGAAGACCAGAAGGTAATCCTCATATATTAAGGAATAAAACTTTAAATATTGTTGCAGTGCTTTTCATTAACTTCTGATTCTATAATGATTTGTGCTTTGTACACCTCAGTTCCGCAAAACAGTAATAAAAAAATGTCCATCAGCTTAGCCTAACCATACTGTACTACCAACATAATACGTTGAGTCATCGTAGAAAAGCCCTTGGTAGAGTGTCAACAGTTACCACATTAAGGAACTTTATCTTATTTAGTTATAGTTTTGTTTGAACTTTGATGCTTCACCTTTCAGCATTGGTAGTTTCATAAAACATTGCTTTTCTCTGTTAAGTAGCACGCATGGCTGGGGGCAGATGTCTCCCACCTCAGATCATGACTGGAAACACAATGTCTAGTTCATCACAACTTAAAGCTTAAAACAACTCCACAAAACTGTGATATTCATAGACCACAAAATAATTGACACCCATCCCATCCTCTGACGAAATTCAATGCATTTCTGAAAATTAATTGAACGGATAAGATCTTAAATTTCCTTGATTCAATGGATACAGCTCTCTGAAATGAGTTCTAGGGAAAAGTGGATTAATAACCTTAACTTATTCTGATCTCATTGCTAATCTCAAACTCATTTTTCATCTTCCAGCCAGTGGACATATGGGATATGATTAGGATGATTTCGACAGCAAGAATAACAATGCCAGGTGCAATGGTTAGGCTTTCTGCAGGAAGAGTTCGTTTTTCTGTCCCCGAGCAGGCTCTTTGTTTCCTTGCTGGTGCCAATTCCATCTTTACAGGTGAGAAGTTGTTGACTACACCAAATAATGACTATGATGCTGATCAGAATATGTTCAAATTACTTGGACTTGTTCCTAAAGCTCCAAATTTCTCTGAGGATGAAAAAGATTCTGAAGACGAAAAGATGGAAGCATCTGTTTAGACTTTAGTTTAGTTCATTCTGTAATGATCAACCAGAGATCTATCTTTTTACTTAAATGTATGACTCTCCTCTTGAAATTTTACCATGATTCTAAGCTTTTTAATGTACCTACCATGTTTTCATTTATTTTGTCTATGATTGTTCTTTTAAATTTTTTTTTATCTTAGCTAATTTTGTTGTCTGTACATATACTTTATCACTACCTCATTAGACATTCGAAAAATGAAACAAATATATAATCTTCATATTCAAATAACACATTTGTAACTACTTTATCAATATACATAAGTAGAGAGGTGTGAAAAAATTGTTGCTTAATTAGTGGCACGTGATTGGGAATTTAATAGTCACCCACCTACTATTGAAAGGAAAACAGAGATTCTAGAAAGGTATTTCTGGATCCAACTTAATTTCAAATTATTTTTTATTCTTAAATTTATCGTCAAATGAATATTAAGATTTAATTTAAATCATAATTTTTTTAAGAAAAATATTTTGATTTTTTTATATCAAATTAAACGAGGTCATTGAGAGTATCTTTCTTAAAAGACTTTTTACTTAATTAATTCCTCTAATATTGGATTCATTTGACAAATAATCTTTGCATAAATGTTTGTTTTTACAATATGAATTTACATCGAAAAATTCTGTATAGAAGTAAACTCAATTCGAAATCTAGTCAATTTTTTTGTTTTTATCTTTAGTACGATGCTTATTAATATCCCTAATTTATAATATTACTAATTTACTACCCATAACTTGACCTATCCAAACATTTATTTAAATGATCCGACCCACCTCAATTAGTGTGCACTATCCATAGACTCAGGGGCGGATCCACGTGGTATCCAGGGATTCATTTGAACTCCTTGGTAAAAATTACACGGTATCTATAAGGTAAATTTTTTGTATTTCTGTAGGTATATATATTTTGAATCCCTTCAACAACAAAGAGAAACAGATGGTGCAATTGCAAGTACCCCCAAATTATGTTGTACGTCACTGGTTCGAATTCCAATGAAAGCATTGAAGTTTTGATTTTTAAACCAAGAAGGATTCAAGATTTTCATTTCCAAAGACTTATTTACACGTTTATACTTTTATTTTTTCAAACCTCCTAAACAAAAATCCGTCAATTAGGTGCTTCTCGTGATAAATAAAACGTGCACGTGTCTCGAATTTCAATGAGAGCACTAAAATTTTGACTTTTAAACCCAAAAGAATTCAAGTCTCCTAAACAAAGATCCGTCAGTTAGGTGGTCTTCGTGATAAATAAAATGTGCATGTGTCTCAAATTCCAGTGAAAGCATTAAAAATTTGATTTCTAAATCCTAAGAATTGGAAGTTTCCATTTCTAAAGACTTATTTACACATTTTTACTTTTATTTTTCAAACCTTTTAAACAAAAATTCTTCGATTAGGTATTCCTCGTGATAAATAAAAACCAATACGTGTCCATTTAAGGGAGAGATTCATGTATGGCCATAATATCATTTTTACTAATAAATTAGTTATGGGACTCCTATTTTACTTTAAATGATAAAAATATAAATGAATCATGTGTATGAAGAGATTAAGTATATAGAGAAAAAAATATTATAAAAGAAAAAAGAACTACATAATAAATAATAAAGATTTATAAAGTGAAT</genome_strand>
        <mrna_strand>TGAGAAAAAAGGCAAGCAAATAGCAATTGAAAGCTGCTCTGTTTTGCTTCACCTATCTGCTTCTGCAAATCCGGCCATTTCTGTGTATATATATAGATAGAAGGTGAAAAGGATGATGTGGGTTCGATCGATTCGGCGGCCATTATCGTCGTTGGTTCTACTTCAGTCGCGTGCCCCGAATTATTCCTCATTGTCAGCTTCAGCAGCTGCAGTAGAAGCGGAACGATGTATAAAGGAAGGACCCAGAAATAACTGGACTAGAGATGAAATCAAGTCTATTTACGATTCACCACTCCTCGATCTCCTCTTTCATGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGTACATAGACATTCTCATAACTTTAGAGAAGTACAGCAGTGCACTTTGCTGTCTATTAAGACAGGGGGATGCAGTGAAGATTGTTCGTATTGTCCTCAATCGTCTAGGTACAACACAGGACTGAAAGCACAGAAACTTATGAATAAGGATGCAGTCTTGGAAGCAGCAAGAAAG......................................................................................................................................................................................................................................................................................................................................................................................GCAAAAGAGGGAGGTAGCACTCGTTTTTGTATGGGTGCTGCATGGAGGGATACAATAGGAAGGAAAACCAATATGAACCAGATCGTCGAGTATGTGAAGGAAATAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACATGGGAATGGAGGTTTGCTGCACCTTGGGAATGCTTGAGAAGCAGCAAGCTTTAGAGCTCAAGAAAGCTGGTCTAACAGCATACAATCACAATCTTGACACCTCAAGAGAATACTATCCTAATATTATAACCACTAGAACTTATGATGAGCGGCTGGAAACTCTTAAGCATGTACGCGAAGCAGGAATTAATGTGTGTTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATAATAGGGCTCGGTGAGGCTGAAGAGGATAGAATTGGTTTGTTGCATACCCTGTCAACTCTTCCAACTCACCCTGAGAGTGTGCCGATTAATGCACTTATTGCAGTAAAAGGTACACCATTGGAAGACCAGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTGGACATATGGGATATGATTAGGATGATTTCGACAGCAAGAATAACAATGCCAGGTGCAATGGTTAGGCTTTCTGCAGGAAGAGTTCGTTTTTCTGTCCCCGAGCAGGCTCTTTGTTTCCTTGCTGGTGCCAATTCCATCTTTACAGGTGAGAAGTTGTTGACTACACCAAATAATGACTATGATGCTGATCAGAATATGTTCAAATTACTTGGACTTGTTCCTAAAGCTCCAAATTTCTCTGAGGATGAAAAAGATTCTGAAGACGAAAAGATGGAAGCATCTGTTTAGACTTTAGTTTAGTTCATTCTGTAATGATCAACCAGAGATCTATCTTTTTACTTAAATGTATGACTCTCCTCTTGAAATTTTACCATGATTCTAAGCTTTTTAATGTACCTACCATGTTTTCATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAANANNNCCTCGGGGGGGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U316341" ref_strand="+" ref_description="SGN-U316341        Tomato 200607 #1 [24 ESTs aligned] arabidopsis/peptide: | Symbol: None | glutathione peroxidase, putative | chr2:13445082-13446955 REVERSE | Aliases: T9H9.9, T9H9_9(evalue: 3e-74, score=275) genbank/nr: gi|31872080|gb|AAP59427.1| phospholipid hydroperoxide glutathione peroxidase [Lycopersicon esculentum](evalue: 4e-93, score=344)">
      <seq>atcggccgaattgggaagaacaacaactaccaaaattaagagcacattttcctaattaaagtaataaatttcgctttcattgccaaatatcttgtttgattttgattaccccatttaattaattttttttttgacttatatatgcataggttagatagaataaaaaaatgctgagtttcaccaatttagctgctcttttctttcttgttcttgctttgttcttgttctatagatacccatctttttctcttatggctgaaggatcaccaaaatctatttatgatttcactgtgaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttctccttattgtcaatgttgcatcaaaatgtggtttaacagattcaaactacaaggagctgaatattttgtatgagaagtacaaagatcaaggttttgaaattttagcatttccttgtaaccagttcctgtggcaagaacccggaacaaatgaggagattcagcaaactgtatgcaccaggttcaaagctgaattccctgtatttgaaaagattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcagaaaaaggcggtttccttggaagtgctgtcaagtggaacttcaccaaattccttgtggacaaagaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagtttgagaaagacataaaaaatctgttgggtgtggcttgagcactacaggtgtgaaagttcagcatatgtattgaccttcagttggaagtgctttcatggttctatctttttccttcttccctgcctacgaaacaagcgagcttgtaccccacccccttagtttttccttgttgatgtactttggttgtgtaaactcgttcattgccatgaatttgtaataaaagttgcatagtagttgttttaatgactcgggactgtagttgctcgatatacaagtatgttatcgccttaataataagaaataagttgtgtgcaggatgtcttgcgtaggtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55118" stop="59773"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55418" g_stop="55700" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="296" r_length="283" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="373" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="435" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57835" g_stop="57953" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="436" r_stop="554" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="555" r_stop="722" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59145" g_stop="59480" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="723" r_stop="1058" r_length="336" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-U316341" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>1045</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U316341" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55418" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59480"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGAACAACAACTACCAAAATTAAGAGCACATTTTCCTAATTAAAGTAATAAATTTCGCTTTCATTGCCAAATATCTTGTTTGATTTTGATTACCCCATTTAATTAATTTTTTTTTTGACTTATATATGCATAGGTTAGATAGAATAAGAAGATGCTGAGTTTCACCAATTTAGCTGCTCTTTTCTTTCTTGTTCTTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAGGATGTCTTGCGTAGGTAAACTGATTA</genome_strand>
        <mrna_strand>GGAAGAACAACAACTACCAAAATTAAGAGCACATTTTCCTAATTAAAGTAATAAATTTCGCTTTCATTGCCAAATATCTTGTTTGATTTTGATTACCCCATTTAATTAATTTTTTTTTTGACTTATATATGCATAGGTTAGATAGAATAAAAAAATGCTGAGTTTCACCAATTTAGCTGCTCTTTTCTTTCTTGTTCTTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG..................................................................................................GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG...............................................................................................................................................................................................................................................AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAGGATGTCTTGCGTAGGTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335615" ref_strand="+" ref_description="SGN-U335615        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | glutathione peroxidase, putative | chr2:13445082-13446955 REVERSE | Aliases: T9H9.9, T9H9_9(evalue: 2e-42, score=97.4) genbank/nr: gi|31872080|gb|AAP59427.1| phospholipid hydroperoxide glutathione peroxidase [Lycopersicon esculentum](evalue: 7e-52, score=117)">
      <seq>ttgctttgaggttgttctatagatacccatctttttctcttatggctgaaggatcaccaaaatctatttatgatttcactgtgaaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttctccttattgtcaatgttgcatcacaatgtggtttaacagattgaaactacagggagctgaatattttgtatgagaagtctcaaaaaacaaggttgtgaaattttagcatttccttgtaacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55326" stop="58165"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55615" g_stop="55700" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="163" r_length="77" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="226" r_length="63" r_score="0.887"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98">
            <donor d_prob="0.764" d_score="0.86"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57835" g_stop="57865" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="257" r_length="31" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-U335615" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>256</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335615" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55615" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57835" e_stop="57865"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGT-ACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAACCA</genome_strand>
        <mrna_strand>TTGCTTTGAGGTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCACAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAACAGATTGAAACTACAGGGAGCTGAATATTTTGTATGAGAAGTCTCAAAAAACAAG..................................................................................................GTTGTGAAATTTTAGCATTTCCTTGTAACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335614" ref_strand="+" ref_description="SGN-U335614        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | glutathione peroxidase, putative | chr2:13445082-13446955 REVERSE | Aliases: T9H9.9, T9H9_9(evalue: 2e-38, score=156) genbank/nr: gi|31872080|gb|AAP59427.1| phospholipid hydroperoxide glutathione peroxidase [Lycopersicon esculentum](evalue: 1e-50, score=203)">
      <seq>acccctctttttctctgatggctgaatgatcaccaaaatctatttatgatttcactgcgcaacgatatacagggcaaatgcatcgtacctttgaccaattatacgggaaagggtctccttattgtcaatgtcgcatcaaaatgtgctttaacagattcaaactaaaaggagctgaatatttatgtatgagaactacaaagatccaggactttgaaattttaccatttccttgaaacgcagatcctgtggcaagaacccgaaacacatgacgacattcagccaactgaatgcaccaggatctaagctgaattccctgtatttcaaaacattgatgtgaacggggataatgctgcaccactttacaagttcttgaaatcataaaaaagccgcttccttgtaagtgctgtcaagagtaacttcaccaaattccttgtggacaaacaaggaaaggttgtggaacgatatgcacccaagacaccacctcttcagattgagaaagacataaaaaatctgttgggtgtggcttgagctctacaggtgtgaaagttcagcatatgtattgaccttcagttggaagtgctttcatggttctatctttttcctacttccctgcctacgaaacaagcgagcttgtaccccacccccttagtttttccttgttgatgtactttggttgtgtaaactcgttcattgccatgaatttgtaataaaagttgcatagtagttgttttaatgactcgggactgtagttgctcgatatacaagtatgttatcgccttaataataagaaataagttgtgtgcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="55339" stop="59753"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55639" g_stop="55700" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="0.887"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124">
            <donor d_prob="0.987" d_score="0.88"/>
            <acceptor a_prob="0.942" a_score="0.79"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56825" g_stop="56901" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="143" r_length="80" r_score="0.857"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773">
            <donor d_prob="0.996" d_score="0.92"/>
            <acceptor a_prob="0.991" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57675" g_stop="57736" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="206" r_length="63" r_score="0.903"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57737" i_stop="57833" i_length="97">
            <donor d_prob="0.764" d_score="0.90"/>
            <acceptor a_prob="0.000" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="57834" g_stop="57953" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="327" r_length="121" r_score="0.858"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784">
            <donor d_prob="0.978" d_score="0.88"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58738" g_stop="58905" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="495" r_length="168" r_score="0.946"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59145" g_stop="59455" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="806" r_length="311" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-U335614" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>800</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335614" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55639" e_stop="55700"/>
          <exon e_start="56825" e_stop="56901"/>
          <exon e_start="57675" e_stop="57736"/>
          <exon e_start="57834" e_stop="57953"/>
          <exon e_start="58738" e_stop="58905"/>
          <exon e_start="59145" e_stop="59455"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTG-AAGGTATACACTTTTTGGGGTTTCCCTTGTTCTTGAGTTTTCAAGTTTTGGTTTTGGTTTCTTGATAGTTGTAGAAAGATTCAATTTTATTGCTTATTGCTTTTGAGCTTTGGATTTTGGTGTTATTTGGTTTCGTATCTGTGATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTTGTGGTATTTGGTTTCATATCTGTAATACCCACTTGTTGTTTTGGTTTCTTTTGCTGAAAGTTGAAGAAAGATTCAATTTTTATTGAATATTGCTTTTGAAGTTTGGATTTTGGTGTCATTTTGTTTCATCTTTCTAGTACCCACTTGTTATATTCTATCTCTTTCTTGAAATTATGTAGATGGTAACTCTTTCTTTGTGTGTGTGTGCTTGGTGTGTGGAAAGATAGTGTTGATAGTGGGGAGGAGAGACCCTAAGACAGTTTGTGCATGCTTGCAGAACCATAGTTTGGTTGTGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTTTGATCCACTTATCTAGTAGAGTCTAATTTAATGGGTTCACTTTGAAATATTGTTTGCATTTCTCAATTTTATGATCCACTTATCTAGAGTCTAATTTAATCTGTTACTTGAGCTGAGCTTCTTTCGGAAACACCCTCTCTATCTCCATGAGGTAGGGGTATGGTTCATGTATACTCTATCCTTCCTGGACCAACTTGTGAGAATACACCGGTATGCTGTTGTTGTAGACTTTAATTTGGATTTAGTGAAGTTCAGTTTTTCTGGACAGGTAATTCAAGTTCCGGTTATTTGCCGCTTTATATAACTTGGATCTTTAGTCACTTATTTGGAGTTCGGTACTTATGTTAAACTAGTTCAGAGCATAATCTGAGTTATAATTCTATCATTAGGCATAATTGATTGTATTACTTATATTATGAACTTTCAGAAATTTAACTAACTATTGGAATTCAAAAGGTTTGAATAGTTGAGGATTAACAAATTATGAGAGAACTAAGCAACTCTGTCTAAAAGTTGTTTTCTTTTTTTATATTAGAACATGGTATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGG-AAATG-A-GGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAATGTCTATAACCACATGCTCAAGAAAAGCTTAAATTAACGAGAACCACCTGTGCACCTTATACTGTTGAATAAGCGAATAATAGTATTTGTATGGTTCCCACTCTGAAATTGGTAAGTGCCTCTATTTCTTAGGTCAATGGTATTGTTGTTTGGTTGAAGTTTAAAAGTAGCTATTATTTATACTTTAAATAGGGAATGAATCACAAAAATTTATTGAAGACAATCTTTCCAGTCTTCACCTATATTGTGGTATCCTTTTTCCCTTGCAGTGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTT-TGTATGAGAAGTACAAAGATCAAGGTTGACAATTCGTCTATTTCTGCAGTTCCAATCTATGATGAATTTCTATTAAACCATATCGTGTGGTCATAAACATAACCAGTAAAGTGCTATTTCAGGTTTTGAAATTTTAGCATTTCCTTGTAAC-CAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAGGTAACAGCTACTGTATGACAGCCCAAAACCGTATAATTTTGAATCATTTTCCAGATGACTGGTAGCTCTCATCTTTGAATGCTTTTAAAAAAAAAAACTTGATCGCAGCATATTATGCGGTACTGCACATAAGAATTTCTTCACCCCAACAATATTAGCGTCTCAAGAATCAACAATTTATTTTTACCTTCTGATCAATTTCTGGTGATATACTGTTGAACTATACTATTGAAACTGCATAAAACTTTGGGTATTCTAGTGTGGATACATGTTCTCTGCAGAGTCTCTATTGTTCTTTTAAAGGTTGTCTTGCAACCTCTGAACATCTATAAAAAGATTTATGAAGTTATTATCAGAGAACGTAATATAAGTTGCAAACTACTTTTAAGTTGCTCTGTGAACAGTCCAAACTTTGGAAGCTTTGTGCAAAAGTTAGTTGTATCATTCTGTTCAGCCCTGATATGCATTTTCTGAGCATGTATCTCTATCAACCCACTATATTCCTGTCCTCTCTTTTTTGTTTTTACTCGAACAAGTAAATAGGTATTTGTTTCATAATTGGAGAACTGCACCAAGATTGTGCCTTGTCTCTCTATTTCTTATCTCCTCTTTCTTCTAATAAAACTTGCTACCGAATAAGCCATAGAACAGAATATGAAACTCAGAAACCATCCAAAGATGAAACTCATCACTATCTCCCTTTGTATTCTCAGTTGCTACGTCACGTGTGTATATATATTGTCATAAACTCCATGTCATTTAAGGAAGTTATTTGATTCCACAGATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAGGTAAAACTTCAACTGTTTTTCGTTTGTTCATTCATATTCTACCTTTCTCGAATTTCCATCATTATTATAATGATATACTGCAGAAGTAACATAATGAAGATTACCAGTCTACGAATATTATGTTTCATTAGATAGAGAAATATTAGTAAAATCCAAGAACCAGATTGAGATAAACATTTATGAAACCTTCTTTTCTCTGTATATGTTACTAATTTTTCCTCTTTCTTGTCCTTTTACAGAAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAGG</genome_strand>
        <mrna_strand>ACCCCTCTTTTTCTCTGATGGCTGAATGATCACCAAAATCTATTTATGATTTCACTGCGCAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATACAGGGCAAATGCATCGTACCTTTGACCAATTATACGGGAAAGGGTCTCCTTATTGTCAATGTCGCATCAAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTTTAACAGATTCAAACTAAAAGGAGCTGAATATTTATGTATGAGAACTACAAAGATCCAG.................................................................................................GACTTTGAAATTTTACCATTTCCTTGAAACGCAGATCCTGTGGCAAGAACCCGAAACACATGACGACATTCAGCCAACTGAATGCACCAGGATCTAAGCTGAATTCCCTGTATTTCAAAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCATAAAAAAGCCGCTTCCTTGTAAGTGCTGTCAAGAGTAACTTCACCAAATTCCTTGTGGACAAACAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGATTGAG...............................................................................................................................................................................................................................................AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCTCTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTACTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U316340" ref_strand="+" ref_description="SGN-U316340        Tomato 200607 #1 [2 ESTs aligned] genbank/nr: gi|31872080|gb|AAP59427.1| phospholipid hydroperoxide glutathione peroxidase [Lycopersicon esculentum](evalue: 1e-05, score=52.8)">
      <seq>atttaagcttgctaacgagattgaaaatgcaggatatacagggaaatgaggtacctttgagcaattataggggaaaggttctccttattgtcaatgttgcatcaaaatggtaagtgaagtaatctagtttctgtcttggctttttccttggttttcatttagaagtgtctccactgcttcactaattagacttatgagttatataagtgtgactaaggtctagttacttctggagagtgtatactatgtcaaatattgtgctactgggtgcatttaagttttattgtacaatgatgatgtcaattgccacaaactagatgtactcgtttagggatgaatttctgttattctgattagtatgtctttgcatgtttttggtagatggaaaattccttaaaaggtttctttttattttaatttacgacacgttgatcctcctgcattattttctgggattccctgactaaagaagttgctagcaggttctttgaacttacttaacttataattatttatttttgcaaagaatgcaataacgaaaatttgagattagtgttcacatagttttgaactgtcttagatgttgatgttgattgatgatgatatattatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="56493" stop="57704"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56793" g_stop="57405" g_length="613"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="613" r_length="613" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-U316340" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U316340" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56793" e_stop="57405"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAA</genome_strand>
        <mrna_strand>ATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U319943" ref_strand="+" ref_description="SGN-U319943        Tomato 200607 #1 [12 ESTs aligned] arabidopsis/peptide: AT2G31560.1 | Symbol: None | expressed protein | chr2:13443634-13445088 FORWARD | Aliases: T9H9.8, T9H9_8 (evalue: 5e-48, score=188) genbank/nr: gi|50897252|gb|AAT85765.1| At2g31560 [Arabidopsis thaliana] >gi|17528942|gb|AAL38681.1| unknown protein [Arabidopsis thaliana] >gi|42571003|ref|NP_973575.1| expressed protein [Arabidopsis thaliana] >gi|30684991|ref|NP_850169.1| expressed protein [Arabidopsis thaliana] (evalue: 4e-46, score=188)">
      <seq>gcacgagaaaaacactcaaaaaagtttggaagaaaaaaaaatggaaactttttctcatctatcatcaagatccaggtcttgtgagagcttttttaatgatggtgttgagcaaataccaggggaagtagtgggagaggaagaagaagaagaagaacaaatggaggagattaccaacacaccacaaagtggatggtttaggaatgttgaggagccatggttgaatagtagatctcaaaagaagaagaaaaatcaagtgtttcttgaagggtatgtagaaaattcagatgaagatgaattagggaggacaaagagtttgactgatgatgatttagaggagcttaaagggtgtttagatcttggttttggtttcagttatgatgaaattcctgagctttgtaatactttaccagctcttgaactttgctattctatgagccaaaagtaccttgatgaacagcaaaagtgttctgatgctatgtctgatactggttcttctggatctggtcatgttgctaattggaagatctctagtcctggtgatgatcctgaagatgtgaaagcaaggctgaaatactgggctcaagctgtggcatgcactgttaaattatgtaactaaaaagggaaaaatggaagccaagaaaagcttaatgcaagatgagaggggaaatgaaatgatcttttcttcatatgaaagagtacttgtgctgtggtctctttgcctggatcctgaaaaaaaaaaggctatggccacaaggccaagaagaaggtacctcatgctttacctgaagatagattcaaaaagaatcatgtccatgatgggtaggcaaagtttaatcaaaatcccaaagtagatgaagaggaaggaagagatgtttcagggctaaaagattaaccaacacatggactaaaatcgatataactttgtgtatcagttttagtcccaagattgcaattcttcttcatgttttaattttgttttcttatgtaatgctgatcaaaatactgttcttggttattaataaatcaagtttcttccttgttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61748" stop="59775"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61450" g_stop="60915" g_length="536"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="536" r_length="536" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60914" i_stop="60583" i_length="332">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60582" g_stop="60078" g_length="505"/>
          <reference_exon_boundary r_type="cDNA" r_start="537" r_stop="1041" r_length="505" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1042" polyA_stop="1058"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-U319943" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1041</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U319943" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61450" e_stop="60915"/>
          <exon e_start="60582" e_stop="60078"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGAGAAAAACACTCAAAAAAGTTTGGAAGAAAAAAAAATGGAAACTTTTTCTCATCTATCATCAAGATCCAGGTCTTGTGAGAGCTTTTTTAATGATGGTGTTGAGCAAATACCAGGGGAAGTAGTGGGAGAGGAAGAAGAAGAAGAAGAACAAATGGAGGAGATTACCAACACACCACAAAGTGGATGGTTTAGGAATGTTGAGGAGCCATGGTTGAATAGTAGATCTCAAAAGAAGAAGAAAAATCAAGTGTTTCTTGAAGGGTATGTAGAAAATTCAGATGAAGATGAATTAGGGAGGACAAAGAGTTTGACTGATGATGATTTAGAGGAGCTTAAAGGGTGTTTAGATCTTGGTTTTGGTTTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGTCATGTTGCTAATTGGAAGATCTCTAGTCCTGGTGAGTCTTTTTTTCCCCCCTCTCTCTAGGGTTTTGTATCTGTAACAAGGGTTTGTGAAAAATCTTGTTTTTCTAGTTAGATTCTTGTTAAAAAGCTTTCATTTTTATGTAGTAAAGGTGGAGTCTTTGGAGTTATAAACTCTTTGTTCCTTAACTTTTATGCTTTTGTGTTACAAAAGACTATACCCCAAAAGGAGAAAATGAAAAAAAAAAAAGGGATCTTTTTGTTATGTGTTTCTTGTTTTTTGTTGGTTGGGAAGGTGAAGATGATGAAAAATCTTCAATTTGTTGCTCAATTGTCACTAATGTTGATACATTTTGTAATACCTCAGGTGATGATCCTGAAGATGTGAAAGCAAGGCTGAAATACTGGGCTCAAGCTGTGGCATGCACTGTTAAATTATGTAACTAAAAAGGGAAAAATGGAAGCCAAGAAAAGCTTAATGCAAGATGAGAGGGGAAATGAAATGATCTTTTCTTCATATGAAAGAGTACTTGTGCTGTGGTCTCTTTGCCTGGATCCTGAAAAAAAAAAGGCTATGGCCACAAGGCCAAGAAGAAGGTACCTCATGCTTTACCTGAAGATAGATTCAAAAAGAATCATGTCCATGATGGGTAGGCAAAGTTTAATCAAAATCCCAAAGTAGATGAAGAGGAAGGAAGAGATGTTTCAGGGCTAAAAGATTAACCAACACATGGACTAAAATCGATATAACTTTGTGTATCAGTTTTAGTCCCAAGATTGCAATTCTTCTTCATGTTTTAATTTTGTTTTCTTATGTAATGCTGATCAAAATACTGTTCTTGGTTATTAATAAATCAAGTTTCTTCCTTGTT</genome_strand>
        <mrna_strand>GCACGAGAAAAACACTCAAAAAAGTTTGGAAGAAAAAAAAATGGAAACTTTTTCTCATCTATCATCAAGATCCAGGTCTTGTGAGAGCTTTTTTAATGATGGTGTTGAGCAAATACCAGGGGAAGTAGTGGGAGAGGAAGAAGAAGAAGAAGAACAAATGGAGGAGATTACCAACACACCACAAAGTGGATGGTTTAGGAATGTTGAGGAGCCATGGTTGAATAGTAGATCTCAAAAGAAGAAGAAAAATCAAGTGTTTCTTGAAGGGTATGTAGAAAATTCAGATGAAGATGAATTAGGGAGGACAAAGAGTTTGACTGATGATGATTTAGAGGAGCTTAAAGGGTGTTTAGATCTTGGTTTTGGTTTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGTCATGTTGCTAATTGGAAGATCTCTAGTCCTG............................................................................................................................................................................................................................................................................................................................................GTGATGATCCTGAAGATGTGAAAGCAAGGCTGAAATACTGGGCTCAAGCTGTGGCATGCACTGTTAAATTATGTAACTAAAAAGGGAAAAATGGAAGCCAAGAAAAGCTTAATGCAAGATGAGAGGGGAAATGAAATGATCTTTTCTTCATATGAAAGAGTACTTGTGCTGTGGTCTCTTTGCCTGGATCCTGAAAAAAAAAAGGCTATGGCCACAAGGCCAAGAAGAAGGTACCTCATGCTTTACCTGAAGATAGATTCAAAAAGAATCATGTCCATGATGGGTAGGCAAAGTTTAATCAAAATCCCAAAGTAGATGAAGAGGAAGGAAGAGATGTTTCAGGGCTAAAAGATTAACCAACACATGGACTAAAATCGATATAACTTTGTGTATCAGTTTTAGTCCCAAGATTGCAATTCTTCTTCATGTTTTAATTTTGTTTTCTTATGTAATGCTGATCAAAATACTGTTCTTGGTTATTAATAAATCAAGTTTCTTCCTTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326694" ref_strand="+" ref_description="SGN-U326694        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | similar to cysteine protease inhibitor, putative / cystatin, putative [Arabidopsis thaliana] (TAIR:At5g05110.1); similar to cysteine protease inhibitor CPI-1 [Brassica oleracea] (GB:AAL59842.1); contains InterPro domain Cystatin C/M (InterPro:IPR003243); contains InterPro domain Cysteine protease inhibitor (InterPro:IPR000010) | chr3:3959870-3961921 REVERSE | Aliases: None(evalue: 1e-13, score=73.2) genbank/nr: gi|585033|sp|P37842|CYTM_SOLTU Multicystatin precursor (MC) gi|629725|pir||S40305 multicystatin - potato gi|415591|gb|AAA16120.1| multicystatin(evalue: 8e-71, score=269)">
      <seq>gtcctatacaatttattttttcagaatgcccatttggagtttgtagaagttttgaatgtgaaagaacaagttgtttctggaatgatgtactatataacacttgtggcaactgatgatggaaataaaaaagattatgaagccaagatttgggtgaaggaatgggaggacttcaagaaagttataagcttcaagcttgttggtaaggatagtgcaataattgggggctttaccgatgttccattcccaaacaaacgcgagttccaagatcttacacgttttgctattcaggattataataagaaagaggttatttacaatgacttactcatcttctattttttcctgttaatttcatattcaaatttataatattttaattttgaacccattgcatgagatatctaataattatttcatttgaatgaacgtcatatacaatttatttttcagaatgcccatttggagtttgtagaaaatctgaatgtgaaaaaacaagttgttgctggaatgttgtactatataacatttgcagcaactgatgctggaaagaaaaacatatatgaaacaaagatttgggtgaaggaatgggaagacttcaaaaaagttgtagagttcaagcttgttggtgatgatggtgcaaagctgggggggattatcaatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="67022" stop="68283"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67322" g_stop="67983" g_length="662"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="662" r_length="662" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-U326694" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U326694" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67322" e_stop="67983"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCTATACAATTTATTTTTTCAGAATGCCCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAAGAACAAGTTGTTTCTGGAATGATGTACTATATAACACTTGTGGCAACTGATGATGGAAATAAAAAAGATTATGAAGCCAAGATTTGGGTGAAGGAATGGGAGGACTTCAAGAAAGTTATAAGCTTCAAGCTTGTTGGTAAGGATAGTGCAATAATTGGGGGCTTTACCGATGTTCCATTCCCAAACAAACGCGAGTTCCAAGATCTTACACGTTTTGCTATTCAGGATTATAATAAGAAAGAGGTTATTTACAATGACTTACTCATCTTCTATTTTTTCCTGTTAATTTCATATTCAAATTTATAATATTTTAATTTTGAACCCATTGCATGAGATATCTAATAATTATTTCATTTGAATGAACGTCATATACAATTTATTTTTCAGAATGCCCATTTGGAGTTTGTAGAAAATCTGAATGTGAAAAAACAAGTTGTTGCTGGAATGTTGTACTATATAACATTTGCAGCAACTGATGCTGGAAAGAAAAACATATATGAAACAAAGATTTGGGTGAAGGAATGGGAAGACTTCAAAAAAGTTGTAGAGTTCAAGCTTGTTGGTGATGATGGTGCAAAGCTTGGGGGGATTATCAATGT</genome_strand>
        <mrna_strand>GTCCTATACAATTTATTTTTTCAGAATGCCCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAAGAACAAGTTGTTTCTGGAATGATGTACTATATAACACTTGTGGCAACTGATGATGGAAATAAAAAAGATTATGAAGCCAAGATTTGGGTGAAGGAATGGGAGGACTTCAAGAAAGTTATAAGCTTCAAGCTTGTTGGTAAGGATAGTGCAATAATTGGGGGCTTTACCGATGTTCCATTCCCAAACAAACGCGAGTTCCAAGATCTTACACGTTTTGCTATTCAGGATTATAATAAGAAAGAGGTTATTTACAATGACTTACTCATCTTCTATTTTTTCCTGTTAATTTCATATTCAAATTTATAATATTTTAATTTTGAACCCATTGCATGAGATATCTAATAATTATTTCATTTGAATGAACGTCATATACAATTTATTTTTCAGAATGCCCATTTGGAGTTTGTAGAAAATCTGAATGTGAAAAAACAAGTTGTTGCTGGAATGTTGTACTATATAACATTTGCAGCAACTGATGCTGGAAAGAAAAACATATATGAAACAAAGATTTGGGTGAAGGAATGGGAAGACTTCAAAAAAGTTGTAGAGTTCAAGCTTGTTGGTGATGATGGTGCAAAGCTGGGGGGGATTATCAATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U314427" ref_strand="+" ref_description="SGN-U314427        Tomato 200607 #1 [8 ESTs aligned] arabidopsis/peptide: | Symbol: None | cysteine protease inhibitor, putative / cystatin, putative, similar to PRLI-interacting factor M (Arabidopsis thaliana) GI:11139270, cysteine proteinase inhibitor (Brassica rapa) GI:762785; contains Pfam profile PF00031: Cystatin domain | chr3:3959870-3961918 REVERSE | Aliases: T2E22.19(evalue: 2e-20, score=97.1) genbank/nr: cysteine(evalue: 4e-133, score=477)">
      <seq>ggcacgagagaaggctcatttggagtttgtagaagttttgaatgtgaaggaacaagttgttgctggaatgatgtactatataacacttgcggtaactgatgctggaaagaagaaaatatatgaagctaacatttgggtgaaagaatgggagcacttcataaaagttgtggaatttaagcctgttagtgatgatagtgtaaaaactggagacattgtcgatgttccagatccaaacatccccccacttcaagatcttgctcgttttgctgtgcaggattataataaggcacagaatgctcatttagagtatgtagaaaacttgaatgtgaaagaacaacttgttgctggaacgttatactacataacacttgtggcaactgatgctggaaagaagaaaatatacgaaactaagatttgggtgaaggaatgggaggacttcaaaaaagttgtagaattcaagcttgttggtgatgatagtccaaatcctgggggcattaccaatgttccattcccaaacctcccccagttcaaagatcttgctcgttttgctgttcaagattataataagaaagagaatgctcatttggagtttgtagaaaatttgaatgtgaaggaacaagttgttgctggaataatatactatataacgcttgtggcaactgatgctggaaagaagaaaatatatgagaccaagattttggtgaagggatgggagaatttcaaggaagttcaagaattcaagcttgttggtgatgccactaagtgaaatgaaactaattttatctctgtgtgaaataaagccacttgcttggcaggaagttattgttatgtttgtgacaaataaagtcacttctttggcataaaattactattatgtttatgagaaataaaaccagatctatgtatagtatctggaagtatttgattgtcttgttgtaaattgtatttgaataatttaaagtctgtaagattgataaatgcatgtttatgggatgataaatgttgtttgaatttaatactttattgctaatacgtatctaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="68096" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68398" g_stop="68679" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="292" r_length="282" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68680" i_stop="68781" i_length="102">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68782" g_stop="69063" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="574" r_length="282" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69064" i_stop="69144" i_length="81">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="69145" g_stop="69615" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="575" r_stop="1045" r_length="471" r_score="0.960"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="69616" i_stop="69941" i_length="326">
            <donor d_prob="0.000" d_score="0.90"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="69942" g_stop="69960" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="1046" r_stop="1064" r_length="19" r_score="0.737"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-U314427" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>1054</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U314427" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68398" e_stop="68679"/>
          <exon e_start="68782" e_stop="69063"/>
          <exon e_start="69145" e_stop="69615"/>
          <exon e_start="69942" e_stop="69960"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGCTCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAGGAACAAGTTGTTGCTGGAATGATGTACTATATAACACTTGCGGTAACTGATGCTGGAAAGAAGAAAATATATGAAGCTAACATTTGGGTGAAAGAATGGGAGCACTTCATAAAAGTTGTGGAATTTAAGCCTGTTAGTGATGATAGTGTAAAAACTGGAGACATTGTCGATGTTCCAGATCCAAACATCCCCCCACTTCAAGATCTTGCTCGTTTTGCTGTGCAGGATTATAATAAGGCACAGGTTAATTATAATAACTTATCCTTCTTCTATTTTTCACATTTAAATTCTGAATCTACTGTAGTATCTAATAATTCTTTCATGTATATACCATCTATTTTTCAGAATGCTCATTTAGAGTATGTAGAAAACTTGAATGTGAAAGAACAACTTGTTGCTGGAACGTTATACTACATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATACGAAACTAAGATTTGGGTGAAGGAATGGGAGGACTTCAAAAAAGTTGTAGAATTCAAGCTTGTTGGTGATGATAGTCCAAATCCTGGGGGCATTACCAATGTTCCATTCCCAAACCTCCCCGAGTTCAAAGATCTTGCTCGTTTTGCTGTTCAAGATTATAATAAGAAAGAGGTTAATCTCTTAATTTTGAATTTATTTTTTGTATCTAATAACTCTTTTATTTGAACGAACGACGTATGTTTTATTTTTCAGAATGCTCATTTGGAGTTTGTAGAAAATTTGAATGTGAAGGAACAAGTTGTTGCTGGAATAATATACTATATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATATGAGACCAAGATTTTGGTGAAGGGATGGGAGAATTTCAAGGAAGTTCAAGATTTCAAGCTTGTTGGTGATGCCACTAAGTGAAATGAAACTACTTTTATCTTTGCGTGAAATAAAGCCACTTGTTTGGCATGAAGTTATTGTTATGTTTGTGACAAATAAAGCCACTTCTTTGGCATAAAATTACTATTATGTTTATGAGAAATAAAATCAGATCTATGTATAGTATCTGAAAGTATTCGATTGTCTTGTTGTCAATTGTATTTGAATAATTTTAAGTTTGTAAGATTGATAAATGCATGTTTATGGGATGATAAATATTGTTTGAATTTAATATTTTATTGCTAATACGTATCTATATATATTTTTCTCTAAAATTTTTACTTAATTCAAATAAAATGTTTAGATGAAGCTAAATATATATATATATAAAAAGTTATAAACGAGAGTATATACATATCATTTATCATAGTTTAAAATAAAATTATTATATTTTCTTCTCCTTTTATATATTGATAGATATAATAAAATATTATATTTTTCAGTTGAAAGTTCTCTACACAAAATGTCATATTGCACTAACTATATATGCAAATAATTAATTGAACAAGTTGTAAGTAATATAATTGATAATTAATTGAACAAGTCGTAAGTAAATAATTAATTAGACAAATACGAAGTGTTATTTTAAACACTAATAAAAAACAA</genome_strand>
        <mrna_strand>AAGGCTCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAGGAACAAGTTGTTGCTGGAATGATGTACTATATAACACTTGCGGTAACTGATGCTGGAAAGAAGAAAATATATGAAGCTAACATTTGGGTGAAAGAATGGGAGCACTTCATAAAAGTTGTGGAATTTAAGCCTGTTAGTGATGATAGTGTAAAAACTGGAGACATTGTCGATGTTCCAGATCCAAACATCCCCCCACTTCAAGATCTTGCTCGTTTTGCTGTGCAGGATTATAATAAGGCACAG......................................................................................................AATGCTCATTTAGAGTATGTAGAAAACTTGAATGTGAAAGAACAACTTGTTGCTGGAACGTTATACTACATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATACGAAACTAAGATTTGGGTGAAGGAATGGGAGGACTTCAAAAAAGTTGTAGAATTCAAGCTTGTTGGTGATGATAGTCCAAATCCTGGGGGCATTACCAATGTTCCATTCCCAAACCTCCCCCAGTTCAAAGATCTTGCTCGTTTTGCTGTTCAAGATTATAATAAGAAAGAG.................................................................................AATGCTCATTTGGAGTTTGTAGAAAATTTGAATGTGAAGGAACAAGTTGTTGCTGGAATAATATACTATATAACGCTTGTGGCAACTGATGCTGGAAAGAAGAAAATATATGAGACCAAGATTTTGGTGAAGGGATGGGAGAATTTCAAGGAAGTTCAAGAATTCAAGCTTGTTGGTGATGCCACTAAGTGAAATGAAACTAATTTTATCTCTGTGTGAAATAAAGCCACTTGCTTGGCAGGAAGTTATTGTTATGTTTGTGACAAATAAAGTCACTTCTTTGGCATAAAATTACTATTATGTTTATGAGAAATAAAACCAGATCTATGTATAGTATCTGGAAGTATTTGATTGTCTTGTTGTAAATTGTATTTGAATAATTTAAAGTCTGTAAGATTGATAAATGCATGTTTATGGGATGATAAATGTTGTTTGAATTTAATACTTTATTGCTAATACGTATCTAAAAAA......................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U317623" ref_strand="+" ref_description="SGN-U317623        Tomato 200607 #1 [20 ESTs aligned] arabidopsis/peptide: AT5G24530.1 | Symbol: None | oxidoreductase, 2OG-Fe(II) oxygenase family protein, similar to flavanone 3-hydroxylase (Persea americana)(GI:727410); contains PF03171 2OG-Fe(II) oxygenase superfamily domain | chr5:8378836-8383404 FORWARD | Aliases: K18P6.6, K18P6_6 (evalue: 2e-49, score=193) genbank/nr: gi|48209915|gb|AAT40509.1| putative hyoscyamine 6 beta-hydroxylase [Solanum demissum] (evalue: 7e-116, score=420)">
      <seq>aattttctacatcatctttactttaagaaaactaaaagaaatggcatctctgatctctagctgggcttcacaagtgaacactgtgcctgaaaggtatgtggtgcctactgagaaaagattgaatgtaaatgtcccaattggtaaagacattccagttattgatttgtcacatcctaattctgccctcatagctgaacaaatcatcaaagcttctcaagactatggagtttttcaggtgattaaccatggagtgtcacaagagttgattggtgatgtccttgaagtttgtgatgaatttttcaagttgccaattgaggacttggaaaagtatactgaagaagaagagttgagtgaatttgagccaaatcttgaccagaaaccaaagctttatattgaaaaggaatataagcctaagaagaatggtaagaatgataaagaagtcattttttggaaagacacttttgctcattgtactcatcctaccaaagaagatagaattaattcttggcctgaaaagccagcaaaatatagggaagtgattggaaaatatagtgagggagtgaggaaggcaaatttgagaattttggagctaatgtgtgaaggattgggacttgaaaaggattactttgcaaatgagctgagccatattcagtatatggctataaacctttacccaaaatgccccgacccgactgtaacagctggagccgtggaacataatgacggcggagtcatcaacttgcttttacaagaattgggcggcttacatgtgcgccgtcagaaagatggacagtggcttgctgttgagcccattcctggtgcattggtttgcatcaatggcatgattttgaaggtgattagcaatgggaagttagaaagtggaatacatagagtggctacaaattcagtgagagatagaatatctcttggatgtttaactagtccttcttgtgatggaaaatgcataattgagcctgctaaaccacttttaagtgaaactaatccacctaaatacaagtcattttcctacactgagtatttgaagattttcttcagtgacacctctgaatttgaagctgcactcaatccatacaaaatttaattaattaatttatcactatgggataaattgatgtgtttctttattttggaggtaccaaaaataatcattgatgaataaattttgtgtgtgtgtgtgtgtttattaatgttatgttttggattttcaataatttcatgctactatgtattgtactacttccttttgtaatagtgatttgagtttgtgatataaataaaacaatttcaataaataaaggtgtgtttgaagaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77255" stop="73845"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76955" g_stop="76721" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="235" r_length="235" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76720" i_stop="76266" i_length="455">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76265" g_stop="75970" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="531" r_length="296" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75969" i_stop="75651" i_length="319">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75650" g_stop="75329" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="532" r_stop="853" r_length="322" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75328" i_stop="74624" i_length="705">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74623" g_stop="74146" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="854" r_stop="1331" r_length="478" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1332" polyA_stop="1351"/>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-U317623" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1331</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U317623" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76955" e_stop="76721"/>
          <exon e_start="76265" e_stop="75970"/>
          <exon e_start="75650" e_stop="75329"/>
          <exon e_start="74623" e_stop="74146"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTCTACATCATCTTTACTTTAAGAAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAGGTAATATAATTATAGAGTTTTAAGTTTTATGTACTGATAGTGAAAAAAATATTTATACAATCAGGTCATTTAAAATGTAATTGCATGATACTTATTATATTTATGTTGGTGGAGGTAGTGACTTCCATGTAATTAGTCGAGAAGTGTATGCAAACTGATACAGACATCACGATGTAATTGCGAGTAGCTTTATTTAAACATTCATTGATAATTAACCTACGATAAGAAAATGTTGTTATAGAGAATGTAGTATGACATGAAAGATTGGGTCCACTGAAAAAAATTTGATTGTTATAGTGAAATATTGTTAAAGAGAGGTTTTTTTGACTGTACAAGCAAGTAACTTGTTATTACAGGTTAGGTTTAACTGATAATAGTGTGTACTAGTTACATGCACTGTCAACGTATATAAATTAAATCGATAATTATATTGTTGTTTATGATGTCATTATTAGGTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAGGTAAGTATTAAATATAATATCTTCTCTATTTCATTTCGTTTTGACCTGCACGTGAAAATTCTTTTTAATTTTGGGTGACGGTGTGATTCAATCTCAGGACGTCTGTCTGCTCTGCTATCATGTAATAATAATACCTGAGTCTAACTCAACCCCAAAAGCTAGCTCATGAAAGAGACCAAATTCTCATCGATAGTGAAACTTTTTAACAATATTAACTAGACATTAATAATTTTTTTAAAAGAATTTTTTATTTTATATATATTTAATATCTAATTCGCAATGAAATGTCTCACGATTATTACTATATTTTATTTACTAGGGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGAGCCATATTCAGTATATGGCTATAAACCTTTACCCAAAATGCCCCGACCCGACTGTAACAGCTGGAGCCGTGGAACATAATGACGGCGGAGTCATCAACTTGCTTTTACAAGAATTGGGCGGCTTACATGTGCGCCGTCAGAAAGATGGACAGTGGCTTGCTGTTGAGCCCATTCCTGGTGCATTGGTTTGCATCAATGGCATGATTTTGAAGGTATTTCCCAAGTTTTTGACGTGACACAAAAATTTTCGTATAATTTAAAATATATCATTATATATTTGCGTTATTATGAATAGAATATTTATTTTTATTAAATTTAAAAATATATCGCTTTTTTAAATCTGTATAAAAAGAAAAACGAGTCATATAATTAAAATTGATGCAGGTGAGTAAGACATAAGCATTTTTGTTGGAATGTAAAGCTGATTTAATATCCGATAATAGATATTAGTAGGGGAGTTAGAATTTTTATTAAGAAGGTTAAAAATATGAAATAGTTAAGGGGATTCAACATTTGTTATTTACGCATAAAATACTCCATCTGTCTTATTTTATGTAAGATAGTTGGACTCAAGACACGGAATTTAAAAAAGAAAAAAAGACTTTTAAAACTTATGGTCTAAAATGGATGATAAAAATTTGTATTGCTATAAATCATTTCATTCATTAGGGTAAAATAAATATTATAAAATTAAATTGATTCTTAATATAAAAATGTGTCATTTTTTTTGAATTAATTAAAAATAAAATAAATCATATAAATTGTGACAGAAAAATTAATTTAATATAATTTTTTATCGAAGGTAATTCAGATGAACCTCTGGACCCTTACTTGTAAGATCCTTTTGTCAATTGTTTTATTTTTTTTATAGGTCAATGTAAAATATGACTAAATTGTCAATTAATTTTTTAACTCAGGTGATTAGCAATGGGAAGTTAGAAAGTGGAATACATAGAGTGGCTACAAATTCAGTGAGAGATAGAATATCTCTTGGATGTTTAACTAGTCCTTCTTGTGATGGAAAATGCATAATTGAGCCTGCTAAACCACTTTTAAGTGAAACTAATCCACCTAAATACAAGTCATTTTCCTACACTGAGTATTTGAAGATTTTCTTCAGTGACACCTCTGAATTTGAAGCTGCACTCAATCCATACAAAATTTAATTAATTAATTTATCACTATGGGATAAATTGATGTGTTTCTTTATTTTGGAGGTACCAAAAATAATCATTGATGAATAAATTTTGTGTGTGTGTGTGTGTTTATTAATGTTATGTTTTGGATTTTCAATAATTTCATGCTACTATGTATTGTACTACTTCCTTTTGTAATAGTGATTTGAGTTTGTGATATAAATAAAACAATTTCAATAAATAAAGGTGTGTTTGAAGA</genome_strand>
        <mrna_strand>AATTTTCTACATCATCTTTACTTTAAGAAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAG...............................................................................................................................................................................................................................................................................................................................GGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGAGCCATATTCAGTATATGGCTATAAACCTTTACCCAAAATGCCCCGACCCGACTGTAACAGCTGGAGCCGTGGAACATAATGACGGCGGAGTCATCAACTTGCTTTTACAAGAATTGGGCGGCTTACATGTGCGCCGTCAGAAAGATGGACAGTGGCTTGCTGTTGAGCCCATTCCTGGTGCATTGGTTTGCATCAATGGCATGATTTTGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTAGCAATGGGAAGTTAGAAAGTGGAATACATAGAGTGGCTACAAATTCAGTGAGAGATAGAATATCTCTTGGATGTTTAACTAGTCCTTCTTGTGATGGAAAATGCATAATTGAGCCTGCTAAACCACTTTTAAGTGAAACTAATCCACCTAAATACAAGTCATTTTCCTACACTGAGTATTTGAAGATTTTCTTCAGTGACACCTCTGAATTTGAAGCTGCACTCAATCCATACAAAATTTAATTAATTAATTTATCACTATGGGATAAATTGATGTGTTTCTTTATTTTGGAGGTACCAAAAATAATCATTGATGAATAAATTTTGTGTGTGTGTGTGTGTTTATTAATGTTATGTTTTGGATTTTCAATAATTTCATGCTACTATGTATTGTACTACTTCCTTTTGTAATAGTGATTTGAGTTTGTGATATAAATAAAACAATTTCAATAAATAAAGGTGTGTTTGAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U327029" ref_strand="+" ref_description="SGN-U327029        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | La domain-containing protein / proline-rich family protein, contains proline-rich extensin domains, INTERPRO:IPR002965, PF05383: La domain | chr5:7198744-7204093 REVERSE | Aliases: T10F18.190, T10F18_190(evalue: 3e-128, score=456) genbank/nr: gi|18420415|ref|NP_568409.1| proline-rich protein family [Arabidopsis thaliana] gi|15450527|gb|AAK96556.1| AT5g21160/T10F18_190 [Arabidopsis thaliana] gi|22655032|gb|AAM98107.1| At5g21160/T10F18_190 [Arabidopsis thaliana] gi|29294066|gb|AAO73903.1| proline-rich protein family [Arabidopsis thaliana](evalue: 2e-126, score=456)">
      <seq>ataaagaaggatcgaggtcaatgaaaataaagaggatggatttcaagtcagattttcccaagaaaatcgtgtaggtgagcttgcatcattagagaaacatgctaaaaaagtgtcagtgtttagtaaagcagaaaccagtaggaagaaatctggattccgtggtccaactcacagagttgacaaaggaagtggtgatgcaagaatggttatggcatcaaatgttgtagaagagaatgtagacgacttatctaatgatttctcgagcacatttatgcttgatgaagagatggagcttgaaaataaaaaggaccagtcctctttgagtggaagagttgaggaagaagatgacgagatgtacgttaatgacgaggctattgagaaacttgtcattgtaactcggaacactcgggcatctcaggtatctggaactgttggaaaagaatcaaaaccaatatctactgagcttgcttctgcaataaatgatggtctctacttctatgagcaggagcttaaagctacacgatccagtcatagatctaacaactccaataatgatcctagagatgacattagtaggtcttttggtactggtgctgctttatccaaatcaaagtatgccgatcattcttctggaggaaaaaacactgaaggtcctggaagttccaactcccggagaaagcaaaacaaaggatttgctaagccacatccaatacataagcagcggctgttttctggaaattaccggaatcatggggtttctcggaacagtgtaggagcaatatctgaaagtccacctagcgattcagttgggtttttctttggttctacacctcctgacagtcatgtgtctaggccttcaaagttgagtgcctctccgcacagcaatcttgctagtaatagtccgccagttggttccatgcctaaaccatttccacccttccagcatccaagtcacaagctgctacaagaaaatggttttacacagcagctgtacaagaagtatcataagcgctgtctgactgatcgcaagaaacttggaattggttgcagtgaggaaatgaatacactgtacaggttttggtcgtattttctgcggaacatgttcatacgttctatgtacaatgagttccaaaagatggctcaagaagatgcagctgctaattataactatgggatggagtgcctatttagattttatagttacggtttggaaaaggaatttagagaggacctttatgacgactttgagagattgacgcttgacacctacaataggggaaacctttacggccttgagaagtactgggcctttcaccatttccgtcagcaacgaggtcagagagcacctttgaagaagcttccagaactggatagactactcagagaagagttccgaaatttggatgactttaaacatgccagaggaggtgccagtgcaagcacaaaggaggacggtcactaaccaacagtgtgattctcagcttcattgaaccgtctgtcagcgaattttgatgccttacagtccatacaatgagctcaagttgccgaattagctttctgagatgatcaaggcaaaaattttgtatatagagcttctgtgaggttggttaatttttacctccgaggttgagctaaaattttaccatgaggggatgcaaccttgtgcctttttgtactttcatcttaggattataaggtgtacatataggaggaagttgaaaacaaaataaaaatgaaaaaaaaaaataaaaaaatgtaaaactaccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="98523" stop="89703"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98223" g_stop="97895" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="330" r_length="330" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97894" i_stop="97074" i_length="821">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97073" g_stop="97004" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="400" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="97003" i_stop="94007" i_length="2997">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="94006" g_stop="93902" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="505" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="93901" i_stop="93825" i_length="77">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="93824" g_stop="93484" g_length="341"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="846" r_length="341" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="93483" i_stop="93304" i_length="180">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="93303" g_stop="93160" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="847" r_stop="990" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="93159" i_stop="92997" i_length="163">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="92996" g_stop="92933" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="991" r_stop="1054" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="92932" i_stop="92114" i_length="819">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="92113" g_stop="91968" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="1055" r_stop="1200" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="91967" i_stop="91773" i_length="195">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="91772" g_stop="91668" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1201" r_stop="1305" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="91667" i_stop="90474" i_length="1194">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.906" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="90473" g_stop="90003" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="1306" r_stop="1776" r_length="471" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-U327029" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1775</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U327029" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98223" e_stop="97895"/>
          <exon e_start="97073" e_stop="97004"/>
          <exon e_start="94006" e_stop="93902"/>
          <exon e_start="93824" e_stop="93484"/>
          <exon e_start="93303" e_stop="93160"/>
          <exon e_start="92996" e_stop="92933"/>
          <exon e_start="92113" e_stop="91968"/>
          <exon e_start="91772" e_stop="91668"/>
          <exon e_start="90473" e_stop="90003"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAAAGAAGGAT-GAGGTCAATGAAAATAAAGAGGATGGATTTCAAGTCAGATTTTCCCAAGAAAATCGTGTAGGTGAGCTTGCATCATTAGAGAAACATGCTAAAAAAGTGTCAGTGTTTAGTAAAGCAGAAACCAGTAGGAAGAAATCTGGATTCCGTGGTCCAACTCACAGAGTTGACAAAGGAAGTGGTGATGCAAGAATGGTTATGGCATCAAATGTTGTAGAAGAGAATGTAGACGACTTATCTAATGATTTCTCGAGCACATTTATGCTTGATGAAGAGATGGAGCTTGAAAATAAAAAGGACCAGTCCTCTTTGAGTGGAAGGTATAGACGATTTCAGTAACTTTGTTTTGCTTATTTTCTTATCTGAATTTGTTAGAATTTCTCTTGGTTTTTCTTCATAGCTGGCTTGTTTCTACACAAAGATATGCTGAAGACTGGCACTGCTGTTTACATATGTTGCTATTCAGCTTATCTAATGCAATTTGGTCATATGATGCTTCATTTACTTGTACACTGCAAATTTGAACATCTCTTTCCTCCCAGAATCTAACCAATTTGGTTAATATTATAGGTGTCTTGTGTTTGCTAGTAAGGTCAAGGTAAAAAACCTGTTTTATATGCATGTTTAACATTTGCCCCCTCAAAAAATCATATAGCGATACTTATATACTTGATTTGCTTCCATAAATTGAGATTTGGTATGTATTTGAAGGAGACTGGTTATGCCTGTGGGCATATTCAAAAAATATATAGCTTTTGGACCTTGATCTTCTTACTATAGCTGGTAGGAAGTCATCTGCTTGCCCGAAATAGGTTAAAAATTCTTTTCTTTTGTGGTCCCTGTTACAATTCATAGAATCTTTTGTGTAGATAACCAGGTTAGACTCTTCTTTTTTGTTTCTTCTTTTGGATGTAACTACTGTTCTTTCTTAGTGCTAGATTTGATATCAATAATACTTGCCTTCTCTCAAAAAAGAAAAGAATTTATGGTAATTGCTATCAGTGTTACTTGATTCATCTGTTAACTCCACATGGAACAACCAAATCATACTGTGAGGACAGACTTTGTATGATCAAATATCTCTTATTGGTTCAATATTGCTGACTATATTGTTAAATCTTGGTGGTGTTGCTTCATGAAGAGTTGAGGAAGAAGATGACGAGATGTACGTTAATGACGAGGCTATTGAGAAACTTGTCATTGTAACTCGGGTAAGAAAATAGCTTTCCATGTCTTCTATTTGGGTGAATTCAGTTTCCGAAGATATTTTTTTCTTTGAATTTGTTGTCACGTGTTTAGACTTCACTTGTCTTATGTCAAACTTACTCCTTAGGGGTCGTTTGGTTGGGAAAAAGTTATCGTAGGATAGCTATCTTGTGATAACTTATCCATCACTATGATATAAATGGTCAATGGTGGGATAAGTTATTACGAACATGGTAACCAAACAAGATACAAAAATTTTATCCAATCACTATTTTCTTATCCCATCACTATTTATCTGTATCCCTCACACCAAACGATCCCTAAGAGTTTTACTACATGCATTAACAACTGAAGGATAGACTCCTATTTTATGTTACAGGTACAATCAGGTCTTGTATGATCCTGGTGATATTAGTTTCTGGATGCGAAAATATGGGAGATTTAATATTTGATTCTTTTAACCGATGAATTGACATAGAATTTACATTGTATTACTTTCACGACATGCCACAAATCGTATTATATTTTTTCCTTGGTTTATAGTTCTAGTAACAAGTATTTCAATTTTGGGGAAGAATTTACAGACATGTGGGCATTCTTACTGGCAGTCTTTCCCTTTGGGTCCAGCTGATATTCTGATTATGCAATTACAAGAGGATCCTATTCAATACTTTGTGCCAATCTAGTTGTGAAAGAATTTATGGGATTTGAACTATATAGTTCAACCCTTATTTCATTTCCTAATTAATGCCTATGCCTTGTTTTGTACTTTGAAAATGTGGGGCCTCCTGCCTCAGGTGCTTTCCTAATTAATGTGCATGCCTCATTTTGTACATTGACAATCCAGGTCCTCAGGTACTTGACCACATCAGTGGTGTGTTACCACTCCTTAGTTATCCAATAGTTATGCAGTAATTTCTCTTTAGTAACAGTTATTTTCCTGTAATAATGCAGTTATTTTCCTGTAATAGTGCAGTCTTGTAATAGTGCAGTCCTTAATTCCAGTTAAGTTAGTAAGTCATGCCCTAGTTTCTAGGGGTAGTTATTTTACAAGTATTGTATTTAAACTATCTGGTGACTGTGAAAATATAAGCAGAAAAATTATTCAAGTTTTTGAGTACTTCAAACTCAAGAGGTTGTAGGTTCTCTCTCTCTTAACGAACCAGCACCATAGGTCGTACAAAGAAAACATTAGATTTCACACTACAACGCCCCATAACCAGATCCATATCCGGGGACCATAACATAGTGGACATGCATTAACTGCTGTTGAGTGATTATAACTTACTAATTATTAATTAGATAATGTATTTGTCAGTAAGATGCCTGAGATACCTACTTATTCATATTATAAGAAAAATTAATTTTTGTATTGAAAAACAAAAATAAGAGGACTAGGGGTGCCTTGAGCTAAACTGGAAATTCAATTGAAAAAAATAAAATAAATAGGAATTCCTGGTCTCGCTGAAGATCTGCCAGTGGATCGATACCTAGGAAGAGGCTTGCAGCATTACCCCACAAAGTAACAGGAAACTTGCTCAAGCAGACTTGATGTAGCAATAAATTGGTTTTAGGTTGTAGTCCCTTGCACTTTGAGTGCACAGACTATGTAGAATCAATATGAAAAGAAATGTCTTGTTCCCCTTCCGACACACAATCTGATGATTAAGCTCAAGAATGAGAAGGTATTTTCAAGTTATATAGCAATTGATGTTATGTCAATATCGGACCAACATCCTATAAATGCTTTGCTTTTAATGGAATATTTGCATTCCAAATAAATCAGTTAGGAGGAAGTTTTCAAAAGGATGTGAATGGACAGCCACAGGTTCCCGCCTATGCAGAAGTTTGTTTCTATATATGAACCACAAATAACTATTAGAAAAATACACCAAACTTGAAAATAGCTTTTTGTCGTCATTGTTAGTTATTACATAGTGTAAGCTCCAAGGGGGTGGCCAAGCGGTCAAAGATTTGGGTAACAACCTTGGGAGCCAATGTACAATTGCAATTGAGGCTATGCTATATGGGTTCTTAGGTGTTGGTGTGGGTAAAGTTAACCAATACTTGTGCAGGTGGGAGCTAGAATGTACTCGGTAGATTAATCGAGGTGGGCCAAGCTACTTAACCGACACCATTATAAAAATAAAAAGAAGTTACTAAATTGTGTTAGTAATCACAAGCAGTGTTGTCTCGATGCTGCGTCTATAAGCAGACTGTTTTTTTCCCGTTCTTTCTTCTTCGTTGCGTATATTGCTGCGTAGTGCGTATAAATCCCCGTTTTTGTCTTCTCTTATTTCTTCTTCTTCAGCTTTTATTTCTTTGTGTTTTTTTTAGTTTATTAATTTAATAATTGAATTTGCCATGTCACTTTACTTGTTCAATTAAAATTGCCATTAATTTATTTCCTTATTTTAGTCACTAGGCATTAGCTAATTAGGTATTCTATTTTCTCAGTAGGTGATTAGTTAATTTCTCTAAGGCACCAAGCAGTAGCTAATTATCTATGAGCCCTTCTTTTTTGAGTGTACATTTGGAATGGTGTTTAGGATTCCTATGCTTCCGAAGCTGGACTCCTGTAGTCAATATGGGATTTTATTGGGATTTCACTAGATGCATCACTTCATATTTTTGTTTTTAGAAAGGTAATTGTAATTTGCAGCCTTGTTATTGACAGCTGGGGTTGGTTGTGTTCCTTACAAGTCTTTCATCTGCCAGCCTTTAACTTGCATGACTAGGATAGTTTGTCCCATCAATCAATAAGTTCCAAAATCAGTTGCCCTATAGACAAAAGTTTTGGCCAAATTCATGGAAAAGCTAAGATATTGCAGCTGATGCAGCTTTGAAGAAGCATGTGGAAAAATGAGCTGTTGTGCTTAAACAGCCTTTTTTTTTCATATCCAAAAATAACCACGACTTCTATTGCCTCTATTATTTCTGCTACACTATGGGCTTTGATTGTTAATTAGGCTAATTACCTCATCTGTGTGGATTTTCTACAGAACACTCGGGCATCTCAGGTATCTGGAACTGTTGGAAAAGAATCAAAACCAATATCTACTGAGCTTGCTTCTGCAATAAATGATGGTCTCTACTTCTATGAGCAGGTTGGTGGTTGCTTTAATAAGGTCATTCTTTCCCTATTCAACTTAATACAGTATTATATTGATCTCTCATCTTCCAGGAGCTTAAAGCTACACGATCCAGTCATAGATCTAACAACTCCAATAATGATCCTAGAGATGACATTAGTAGGTCTTTTGGTACTGGTGCTGCTTTATCCAAATCAAAGTATGCCGATCATTCTTCTGGAGGAAAAAACACTGAAGGTCCTGGAAGTTCCAACTCCCGGAGAAAGCAAAACAAAGGATTTGCTAAGCCACATCCAATACATAAGCAGCGGCTGTTTTCTGGAAATTACCGGAATCATGGGGTTTCTCGGAACAGTGTAGGAGCAATATCTGAAAGTCCACCTAGCGATTCAGTTGGGTTTTTCTTTGGTTCTACACCTCCTGACAGTCATGTGTATGTTCTGGATCCCTGGTGTTGTTCTAATGTAGTTGTGTATTGTAATATGTTTGAGATTATTTAATTATTTTGTCAAAGAGCAAATGCAAGTCTATGAATATATGATTATTAGGGACATTGTGAAAACAGTTCTGGGTTGTTACACAATAACTTAGTTACCTGAACTTCTGTTTACAGGTCTAGGCCTTCAAAGTTGAGTGCCTCTCCGCACAGCAATCTTGCTAGTAATAGTCCGCCAGTTGGTTCCATGCCTAAACCATTTCCACCCTTCCAGCATCCAAGTCACAAGCTGCTACAAGAAAATGGTTTTACACAGCAGCTGTGAGTAGATTTACTTTCAATAGGAGTTGGTGTTCTATGCATTTTGTATTCAAGTGCATGCATCTGTTCATGCGCGGGTCTGCATGTGCACTGACTTATACATATATTCCTTGTGCATCTCTTTTCGCTCCTGAACGTTGGTTTTGGATTTTCCATCTTTTAGGTACAAGAAGTATCATAAGCGCTGTCTGACTGATCGCAAGAAACTTGGAATTGGTTGCAGTGAGGTGCCTACTTAATTTTTGTTCTGCATTGGCTTGTGTTTGATGTACTAGTTCCATAATAGCATCACCGTCTCCTTGAGGATTACAGAAAGGAAACAAAGAGGAAATATATTAAATTTAATAACAGTGAATTGCTTCTTGTATAAGGGCATAAAATGTGAGGAATTTATCACTCTTATTCTGCAAGTTCATTTCAGGGGTGGGATATGAAAATAAAGATGACTAATCTCTTTATGTATAATGTGAAATTTGTTTCATGATTTCATTGACTTCCTTGAGGTTTTTGTTTTGACCAGTCAAAGCTCATCTTATTATTGCTGCACCAAGATAGTAACAAAATATTACTAGAATGTTCTAACATTAGGTCTCTGAGAAATTTATCCAAGTATTGACACAGAGAAAATTTCCAGTGCCCTCATGAAGAAAAACAAATTTTCCAGTACCTAGAAGGTACTCTTTGTTTAAAACCCACTTATGAAGCAAATCTTCACAAGTAGTACTATTCTTTACCTAAAAGGTACTGTTTGTTGGTAGATCCAATTTTAAAATAGATCTGTACAAAAAGAACAGTTCTCTTGAATTTGCAAACCTTGTATTGCTTGAAAGGAATCATATGAATGCTTACAAACTTTATAAATGAACAATATTCTTACTAACCAATTGGCTGAACTCATAATGAGAGGTTTCTAACTCATCTCTGTCTATGCATACACACATGTATGATGCATCTATTTGTCCATATACTGCTTATTTGGCTGTTTACTTCTGTGCTAAATTGCATAAATTAATTTTCTCTAAAGGTTCTTATCTTTTGACATGCAGGAAATGAATACACTGTACAGGTTTTGGTCGTATTTTCTGCGGAACATGTTCATACGTTCTATGTACAATGAGTTCCAAAAGATGGCTCAAGAAGATGCAGCTGCTAATTATAACTATGGGATGGAGTGCCTATTTAGATTTTATAGGTAGTGTTTACATGCTATTGTGACTTGCATGGAAAGAAGGGGAGAAATATGACATGTTTTGTTTTCCCTTTTACTTTTAAACCCTTCAGCTGTTCTTTTCTAGATCCACCTCCATGTGATGCAACTTCAACAGTTACTTTCTTTTCCTTCTGACATACTTATTTGACTGCTCATTATACTGTGTTTGTGTTTCAGTTACGGTTTGGAAAAGGAATTTAGAGAGGACCTTTATGACGACTTTGAGAGATTGACGCTTGACACCTACAATAGGGGAAACCTTTACGGCCTTGAGAAGTACTGGTAATATACCTTACCTTGTTTGAAAGTTCTCGTTTCCGTGTCCTTTCCTCCTTTTTTTTTTTTTGTGAAAACTATGAGACTCCGACTGATATTGAAGGATCAAAACACTGGGAATTAAGGTATCATGTGGATAGGATGCTCTTTTATAGTAATTGTTTAAGCCCCAAATTAGAACCTATGTTTTCTGAATCATTTTAAGCCTCTGATTACTTGCCTTTCCAATTTTAGATTCACTTCATTCAGTGATCCATGTTCTGTGTTTTTTTAATCTCTTAATTTTAGAGAGGCAATGCTCCCTTAAAAAATGGTTTCTGAATACAGCATTATTCATAGCCAACTGTAACACGAATGGAAGAGTTTACTTTGAATCGTTTCTTCCAGGCTTGATTTTGTTTGCTTTTCTTTTTTCCCTTCCAAGTTCCTGTAGTTTCTTCTTGTGCATTTTGATCTTCTTTTTCTTCTCTCGTTCTCCTCCCCTGGGACCCCCACAGCTTCGGTATTAAGCATCATGGTGACATGCCATGATCAATTTTTGCTGCCTTCTTTAGAGGAACTCCTGGTTGTGAAGCTCTTGTTGATCTATCACACAGGAAATTACACCAATGACCTTGGAAATTGATGATCTCGAACTTTTGACCTCTTCTTTTGCGCCATGGGCAAAACTTCAAGGGATCTCCCTCTATCACAGCAGTAAGGGACTTTGAAAGAATCCCTTAATAGTGGACTGTAGTTTTGAGTGACTATTGCTTGCTTGCTTAAGCGTCCGCGCAACTTAGGTTACTGCTGCAAATGAAGTGTGTTACTGAAACCAACATATACCTGTAACCTAAGTTGCAAATGAAGAAGCTAGCGATCATAACCTTCAATAATGAACTTGAGACCAATTGAACCATGAGCACTTCTGACTCAAGTAAAACAAAACATATACCTTATAGTGGACTTTAGTTCTGAGTGACTATTGAATAAAAAGTGGGGAGGATTCCCCATGTACACGAATGGGGCATATAGTGCATCCGACCACCTTTTCCCTTTGTTAAAAGGAAAAACTCGGGTATGTCGGGGAAGGTGTTGCGGACAGGCTGATTTAGAGATGATATTGTACACATCAACTTTGCTTTTGTTGATACCTAGATTTTTTATTGGAAGTATTTTTATGCTCTTACTAACATGATCTTACTGCAATCATTCTGGAAGGGCCTTTCACCATTTCCGTCAGCAACGAGGTCAGAGAGCACCTTTGAAGAAGCTTCCAGAACTGGATAGACTACTCAGAGAAGAGTTCCGAAATTTGGATGACTTTAAACATGCCAGAGGAGGTGCCAGTGCAAGCACAAAGGAGGACGGTCACTAACCAACAGTGTGATTCTCAGCTTCATTGAACCGTCTGTCAGCGAATTTTGATGCCTTACAGTCCATACAATGAGCTCAAGTTGCCGAATTAGCTTTCTGAGATGATCAAGGCAAAAATTTTGTATATAGAGCTTCTGTGAGGTTGGTTAATTTTTACCTCCGAGGTTGAGCTAAAATTTTACCATGAGGGGATGCAACCTTGTGCCTTTTTGTACTTTCATCTTAGGATTATAAGGTGTACATATAGGAGGAAGTTGAAAACAAAATAAAAATGAAAAAAAAAAATAAAAAAATGTAAAACTACCAAAAAAAAAA</genome_strand>
        <mrna_strand>ATAAAGAAGGATCGAGGTCAATGAAAATAAAGAGGATGGATTTCAAGTCAGATTTTCCCAAGAAAATCGTGTAGGTGAGCTTGCATCATTAGAGAAACATGCTAAAAAAGTGTCAGTGTTTAGTAAAGCAGAAACCAGTAGGAAGAAATCTGGATTCCGTGGTCCAACTCACAGAGTTGACAAAGGAAGTGGTGATGCAAGAATGGTTATGGCATCAAATGTTGTAGAAGAGAATGTAGACGACTTATCTAATGATTTCTCGAGCACATTTATGCTTGATGAAGAGATGGAGCTTGAAAATAAAAAGGACCAGTCCTCTTTGAGTGGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGAGGAAGAAGATGACGAGATGTACGTTAATGACGAGGCTATTGAGAAACTTGTCATTGTAACTCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACTCGGGCATCTCAGGTATCTGGAACTGTTGGAAAAGAATCAAAACCAATATCTACTGAGCTTGCTTCTGCAATAAATGATGGTCTCTACTTCTATGAGCAG.............................................................................GAGCTTAAAGCTACACGATCCAGTCATAGATCTAACAACTCCAATAATGATCCTAGAGATGACATTAGTAGGTCTTTTGGTACTGGTGCTGCTTTATCCAAATCAAAGTATGCCGATCATTCTTCTGGAGGAAAAAACACTGAAGGTCCTGGAAGTTCCAACTCCCGGAGAAAGCAAAACAAAGGATTTGCTAAGCCACATCCAATACATAAGCAGCGGCTGTTTTCTGGAAATTACCGGAATCATGGGGTTTCTCGGAACAGTGTAGGAGCAATATCTGAAAGTCCACCTAGCGATTCAGTTGGGTTTTTCTTTGGTTCTACACCTCCTGACAGTCATGT....................................................................................................................................................................................GTCTAGGCCTTCAAAGTTGAGTGCCTCTCCGCACAGCAATCTTGCTAGTAATAGTCCGCCAGTTGGTTCCATGCCTAAACCATTTCCACCCTTCCAGCATCCAAGTCACAAGCTGCTACAAGAAAATGGTTTTACACAGCAGCT...................................................................................................................................................................GTACAAGAAGTATCATAAGCGCTGTCTGACTGATCGCAAGAAACTTGGAATTGGTTGCAGTGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATGAATACACTGTACAGGTTTTGGTCGTATTTTCTGCGGAACATGTTCATACGTTCTATGTACAATGAGTTCCAAAAGATGGCTCAAGAAGATGCAGCTGCTAATTATAACTATGGGATGGAGTGCCTATTTAGATTTTATAG...................................................................................................................................................................................................TTACGGTTTGGAAAAGGAATTTAGAGAGGACCTTTATGACGACTTTGAGAGATTGACGCTTGACACCTACAATAGGGGAAACCTTTACGGCCTTGAGAAGTACTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTTTCACCATTTCCGTCAGCAACGAGGTCAGAGAGCACCTTTGAAGAAGCTTCCAGAACTGGATAGACTACTCAGAGAAGAGTTCCGAAATTTGGATGACTTTAAACATGCCAGAGGAGGTGCCAGTGCAAGCACAAAGGAGGACGGTCACTAACCAACAGTGTGATTCTCAGCTTCATTGAACCGTCTGTCAGCGAATTTTGATGCCTTACAGTCCATACAATGAGCTCAAGTTGCCGAATTAGCTTTCTGAGATGATCAAGGCAAAAATTTTGTATATAGAGCTTCTGTGAGGTTGGTTAATTTTTACCTCCGAGGTTGAGCTAAAATTTTACCATGAGGGGATGCAACCTTGTGCCTTTTTGTACTTTCATCTTAGGATTATAAGGTGTACATATAGGAGGAAGTTGAAAACAAAATAAAAATGAAAAAAAAAAATAAAAAAATGTAAAACTACCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U325302" ref_strand="+" ref_description="SGN-U325302        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: | Symbol: None | La domain-containing protein / proline-rich family protein, contains proline-rich extensin domains, INTERPRO:IPR002965, PF05383: La domain | chr5:7198744-7204093 REVERSE | Aliases: T10F18.190, T10F18_190(evalue: 1e-06, score=50.8) genbank/nr: gi|56783776|dbj|BAD81188.1| la related protein -like [Oryza sativa (japonica cultivar-group)] (evalue: 3e-05, score=52.4)">
      <seq>attcaatattttgtctctttgtctgaaacactcatcaaccctactagtatctctctctcagccaccacacaccactgtaaacctccgccgttttcgccttttcttcatcggagtatcactaatttgaatttatatatttatatatagaagttgctgactatggcggaaaatgagagtactggagatgatcagaaggaggtgattgagcctccaaagtcgccgtggaagactccggcgccggcgccggtgccggcggataagggttctgcgtcgtcaggggatgatgattctgattcctggccggcacttgctgatgctcagcagatgattaagtctggtgattctagttccgccgctaagttgccgtcacttccgccgcagcaggagattggcagccgcaatgttgcttctgacaaggtccgaggtgagcagctaaagttccatgggtcttctagtgccaaatcttcaaataagtcatcatccgcagttcaacaaagaccagtgcataggcacaaccaaaatggtgtgccatcatttcctgtgcccttggcttaccaccaatcaggattccctcctttttatcaaagtatggtacctatgccacatattcctcttccagggtatgcataccagccccctcgagggtctttctcaggagctgaaggtcacgtggctaggtctgatggtgatgctgcatctcaagcttttgtaccccctataaatggtgggtttcgccccccatcacgaggggatccaaatgaccatgatgccaaattctacagaggaagacctaatacacaagagcgaggtagccagttagttcaagcttgtctaatcagcgatctgtgggttctaaagatgacattcagctgcaacaaagtatggggctaaggcctttccta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="102568" stop="99910"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102268" g_stop="101852" g_length="417"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="417" r_length="417" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101851" i_stop="100696" i_length="1156">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100695" g_stop="100210" g_length="486"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="902" r_length="485" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-U325302" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>903</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U325302" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102268" e_stop="101852"/>
          <exon e_start="100695" e_stop="100210"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCAATATTTTGTCTCTTTGTCTGAAACACTCATCAACCCTAGTAGTATCTCTCTCTCAGCCACCACACACCACTGTAAACCTCCGCCGTTTTCGCCTTTTCTTCATCGGAGTATCACTAATTTGAATTTATATATTTATATATAGAAGTTGCTGACTATGGCGGAAAATGAGAGTACTGGAGATGATCAGAAGGAGGTGATTGAGCCTCCAAAGTCGCCGTGGAAGACTCCGGCGCCGGCGCCGGTGCCGGCGGATAAGGGTTCTGCGTCGTCAGGGGATGATGATTCTGATTCCTGGCCGGCACTTGCTGATGCTCAGCAGATGATTAAGTCTGGTGATTCTAGTTCCGCCGCTAAGTTGCCGTCACTTCCGCCGCAGCAGGAGATTGGCAGCCGCAATGTTGCTTCTGACAAGGTTAGTTTGATTTTTTTTTTAATTACATTAGATTTAAAGTACTCTTTTTTTTTTATTCGTTGTTTGTATTGATTTGCGATTGTTGTGTAAAGGGGAAAAATATTTGTGGGTATATGTGATGAGTTGTTTACCTAGTTGGTTTTTGAACTATAAAGACGCCATTTTTAAGTGTATCTTTGATTGTATATATACATGGAGAAAGAAGGGAAGATATGGAATGAAGATAATCTGACTATGTCATTGTTTTGCACAGAACTAGTATTTAATATTTTACACACTAAAATTGTTTGATATAATAACAAAATGTTTCAATTTACTGAGAAAGGGAATAATAAAATTTAATATTTCATAAGGAATTAGGTTTGCATCATTTTGATGTTAGTAACATTGTTCTATACAAGAGAATGTCTGGAAGTGAATGAGTTCTGAAAGATACGACATTCTGAATGATTCTCTTGACATTTTGAGTTCACCTTCCAAGTTCAGGGCGGCAAGCATTTTAAATGTTTATTTGGGAAGTTGAAAAGTAACTGGCTGAATTATCTGAAGAGGCAGTGTTGCTGGAGCATCTACTATAAGAGGTGGCATTGTTGTTCATGAAAATTTTGCTGCAAAAAATGGCAGAATGCTGGTCGGAATAGTACTGGTGCTATCGAAACGATTATTGGAAAGACGCTCGTTGCCGCTGGAATTGTCACTAGAAAGCTGAGAGATGTCACCAAGTTGGTTACCAAAAAAAGGTGTAGTATTGCCGAACAATTGCTAGAGAAGAAGTGTACTGCTGCAGAAACAGTCACCCGAATAGATATTGTGGTCTTGTGTAGCTGATCCATGTAGCGTGGGTTTAAGATGTAGTTCTTTTGGTTGTCATAATTTTTGAGATTTTTGATGTTTTTGTAGTGTGCTTTTCTTCCATCTGTTTCAGCTTAAATGTCAAAACTGATTAGTCATTGTTCTATGTCTGTTGATTGTCTGTTGAAGTAATACTTTGTCTTTATAACTTTGCAAGATACTGCATCATATCTGGCACATTCAAATAGGTTCTTAATATGGCAACTTTGTCCGTCATTACACCTCTGCGGATGGATTTATTCCCTACTACCATTAACTAGGATGTATTACCATGAAATATATTTGATGATATGTTGTATTGTAGGTCCGAGGTGAGCAGCTAAAGTTCCATGGGTCTTCTAGTGCCAAATCTTCAAATAAGTCATCATCCGCAGTTCAACAAAGACCAGTGCATAGGCACAACCAAAATGGTGTGCCATCATTTCCTGTGCCCTTGGCTTACCACCAATCAGGATTCCCTCCTTTTTATCAAAGTATGGTACCTATGCCACATATTCCTCTTCCAGGGTATGCATACCAGCCCCCTCGAGGGTCTTTCTCAGGAGCTGAAGGTCACGTGGCTAGGTCTGATGGTGATGCTGCATCTCAAGCTTTTGTACCCCCTATAAATGGTGGGTTTCGCCCCCCATCACGAGGGGATCCAAATGACCATGATGCCAAATTCTACAGAGGAAGACCTAATACACAAGAGCGAGGTAGCCAGTTTAGTTCAAGCTTGTCTAATCAGCGATCTGTGGGTTCTAAAGATGACATTCAGCTGCAACAAAGTATGGGGCTAAGGCCTTTCCTA</genome_strand>
        <mrna_strand>ATTCAATATTTTGTCTCTTTGTCTGAAACACTCATCAACCCTACTAGTATCTCTCTCTCAGCCACCACACACCACTGTAAACCTCCGCCGTTTTCGCCTTTTCTTCATCGGAGTATCACTAATTTGAATTTATATATTTATATATAGAAGTTGCTGACTATGGCGGAAAATGAGAGTACTGGAGATGATCAGAAGGAGGTGATTGAGCCTCCAAAGTCGCCGTGGAAGACTCCGGCGCCGGCGCCGGTGCCGGCGGATAAGGGTTCTGCGTCGTCAGGGGATGATGATTCTGATTCCTGGCCGGCACTTGCTGATGCTCAGCAGATGATTAAGTCTGGTGATTCTAGTTCCGCCGCTAAGTTGCCGTCACTTCCGCCGCAGCAGGAGATTGGCAGCCGCAATGTTGCTTCTGACAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGAGGTGAGCAGCTAAAGTTCCATGGGTCTTCTAGTGCCAAATCTTCAAATAAGTCATCATCCGCAGTTCAACAAAGACCAGTGCATAGGCACAACCAAAATGGTGTGCCATCATTTCCTGTGCCCTTGGCTTACCACCAATCAGGATTCCCTCCTTTTTATCAAAGTATGGTACCTATGCCACATATTCCTCTTCCAGGGTATGCATACCAGCCCCCTCGAGGGTCTTTCTCAGGAGCTGAAGGTCACGTGGCTAGGTCTGATGGTGATGCTGCATCTCAAGCTTTTGTACCCCCTATAAATGGTGGGTTTCGCCCCCCATCACGAGGGGATCCAAATGACCATGATGCCAAATTCTACAGAGGAAGACCTAATACACAAGAGCGAGGTAGCCAG-TTAGTTCAAGCTTGTCTAATCAGCGATCTGTGGGTTCTAAAGATGACATTCAGCTGCAACAAAGTATGGGGCTAAGGCCTTTCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313966" ref_strand="+" ref_description="SGN-U313966        Tomato 200607 #1 [25 ESTs aligned] arabidopsis/peptide: | Symbol: None | PAZ domain-containing protein / piwi domain-containing protein, similar to SP:Q9QZ81 Eukaryotic translation initiation factor 2C 2 {Rattus norvegicus}; contains Pfam profiles PF02171: Piwi domain, PF02170: PAZ domain | chr2:11543612-11549431 REVERSE | Aliases: T20P8.9, T20P8_9(evalue: 0, score=923) genbank/nr: AGO4-1(evalue: 0, score=1126)">
      <seq>gcgaaaaaccttgtcgtgagcagatgtttactctaaagcagaagagcaaagatgaggatggtgaagtgcaaacttcagaagtgactgtttatgattactttgttaatcatcgtaacatagacttgcgatattctgccgatttgccgtgcctcaatgttggaaagcctaaacgtcctacctatttccccattgagctctgcactttggtctcattgcaaaggtacacaaaagccttgtccacctttcagagggcttccttggtggagaagtccaggcaaaagcctcaggagagaatgcaaattttgagcaatgctctcaaaatcaacaattatgatgctgagcctctgcttcgttcttctggtgtctcaatcagtagcaacttcacccaggttgacgggcgcgtactgcctgctcctaagttgaaggctggaaatggagatgaccttttcacccggaatggaaggtggaactttaataataagagattctttgagccagcaaaggtagagcgttgggctgttgtgaacttttctgcacgctgtgatgtccgtggtctagtcagagatttgacaagacttggagagacgaagggaattagtgtggaagctccatttgaagtgtttgaagagtctccacagcttagaagggctccacctgttgtcagagttgacaaaatgtttgaagagatccagtcaaaacttcctggtgcccccaagtttcttctctgtcttcttcctgagaggaaaaattgtgacatatatggtccatggaagcgaaaaaatctggctgatcatggtatagtaactcaatgcttggctcctggaagagttaatgatcagtatctcacaaaccttctccttaagatcaatgctaagcttggtggtttaaattctatgttagctgcggagatttctccttccatccccatggtatctaaggtccccaccatgattcttggaatggacgtatcacatggctctcccggccagtctgatgttccatcaattgctgcagttgtgagttcaaggcagtggccgtcaatatctcgttatagagcttcagtgcgcactcaatctcctaaagtggagatgattgataacatatttaaaaaagtttcagacactgatgatgatgggattatgagggaacttttgctagatttttatgtgagttccgggaaaaggaagcctgagcacattatagtattcagggatggtgtcagtgaatctcaatttaatcaagttctaaacatagaactggaccagctcattgaggcctgcaattttctagatgagaagtggtcgcccaagtttgttatcattgttgctcagaaaaatcatcatacaaagtttttccagtctggatctcctgataatgttccaccagggacaattatagataacaaagtttgtcatccaaggaacaatgacttctatctgtgcgcccatgctggaatgattggtacgactcgacctacacattaccatgtgttgttggatgaagttggtttctcacctgatgaacttcaagaacttgttcataatctgtcctatgtgtaccaaagaagcactactgctatatccattgtggctccgataagttatgcccatttggccgccacacaggtgggtcaatggatgaaattcgaggatgcatcagagacatcgtcaagccatggtggtctgactaatgctggtccagttactgttcctcaattgccccgtcttcaggagaacgttgctagctccatgttcttctgttgaggcctgtgcaccacctcctgttttactctacgcggttaatgtatgctctagacaaatggtttctgtaaatagctctagtttgacagcacttggagtacgaaccttgtcctagtgacctcccaaaaacaacttagttatgcggtacaatactaggtctgttgccatattcaggtctcatgcatatttttcgcgcttctgttctcctgaacaattttgctatgtatctgtaaaatgcatagagattaacctggtggtgtgactatgcatcaattatgcttttttatatgtaaatggtaatatataacttgtttttttcccgcttttttaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="107907" stop="71435"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107607" g_stop="107583" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107582" i_stop="107458" i_length="125">
            <donor d_prob="0.746" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107457" g_stop="107289" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="194" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107288" i_stop="107205" i_length="84">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107204" g_stop="107088" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="311" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107087" i_stop="107011" i_length="77">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107010" g_stop="106903" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="419" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="106902" i_stop="106818" i_length="85">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106817" g_stop="106755" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="482" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="106754" i_stop="106578" i_length="177">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="106577" g_stop="106464" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="596" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="106463" i_stop="106388" i_length="76">
            <donor d_prob="0.537" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="106387" g_stop="106222" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="597" r_stop="762" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="106221" i_stop="106136" i_length="86">
            <donor d_prob="0.742" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="106135" g_stop="106023" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="763" r_stop="875" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="106022" i_stop="105920" i_length="103">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="105919" g_stop="105782" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="876" r_stop="1013" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="105781" i_stop="105704" i_length="78">
            <donor d_prob="0.865" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="105703" g_stop="105573" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="1014" r_stop="1144" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="105039" g_stop="104974" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1145" r_stop="1210" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="104973" i_stop="104598" i_length="376">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.845" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="104597" g_stop="104534" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1211" r_stop="1274" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="104445" g_stop="104334" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="1275" r_stop="1386" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="104333" i_stop="104258" i_length="76">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="104257" g_stop="104184" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1387" r_stop="1460" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="104091" g_stop="103997" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1461" r_stop="1555" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103">
            <donor d_prob="0.827" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="103893" g_stop="103862" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1556" r_stop="1587" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="16">
          <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="17">
          <gDNA_exon_boundary g_start="103779" g_stop="103280" g_length="500"/>
          <reference_exon_boundary r_type="cDNA" r_start="1588" r_stop="2087" r_length="500" r_score="1.000"/>
        </exon>
        <intron i_serial="17">
          <gDNA_intron_boundary i_start="103279" i_stop="102862" i_length="418">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="18">
          <gDNA_exon_boundary g_start="102861" g_stop="102831" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="2088" r_stop="2118" r_length="31" r_score="0.742"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-U313966" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2118</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U313966" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107607" e_stop="107583"/>
          <exon e_start="107457" e_stop="107289"/>
          <exon e_start="107204" e_stop="107088"/>
          <exon e_start="107010" e_stop="106903"/>
          <exon e_start="106817" e_stop="106755"/>
          <exon e_start="106577" e_stop="106464"/>
          <exon e_start="106387" e_stop="106222"/>
          <exon e_start="106135" e_stop="106023"/>
          <exon e_start="105919" e_stop="105782"/>
          <exon e_start="105703" e_stop="105573"/>
          <exon e_start="105039" e_stop="104974"/>
          <exon e_start="104597" e_stop="104534"/>
          <exon e_start="104445" e_stop="104334"/>
          <exon e_start="104257" e_stop="104184"/>
          <exon e_start="104091" e_stop="103997"/>
          <exon e_start="103893" e_stop="103862"/>
          <exon e_start="103779" e_stop="103280"/>
          <exon e_start="102861" e_stop="102831"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGAAAAACCTTGTCGTGAGCAGATGTATGTTAGTAATGATCTATTTATTTCTACCTTGGCTCAACTAATACACACATGTGCAGGATGGTCAACATTGATTTGTTATAATGTAATGGGGCAAGCTCATTTTATTCTCTTGACATTTTTAGGTTTACTCTAAAGCAGAAGAGCAAAGATGAGGATGGTGAAGTGCAAACTTCAGAAGTGACTGTTTATGATTACTTTGTTAATCATCGTAACATAGACTTGCGATATTCTGCCGATTTGCCGTGCCTCAATGTTGGAAAGCCTAAACGTCCTACCTATTTCCCCATTGAGGTAAACATATTGAGTTAAAGTTAACCGTTTTTATGTACTGTCTTTTGTTCATGCAGTTTTGAATTCTTTTTTTGAATGTTACAGCTCTGCACTTTGGTCTCATTGCAAAGGTACACAAAAGCCTTGTCCACCTTTCAGAGGGCTTCCTTGGTGGAGAAGTCCAGGCAAAAGCCTCAGGAGAGAATGCAAATTTTGAGCAATGTAGGTCTCTTCTATCCTAACATAATCTTTTGCTTGCTCTAGTTATACTTAACTAATTTCCTACTGGATTGTGGAAGGCTCTCAAAATCAACAATTATGATGCTGAGCCTCTGCTTCGTTCTTCTGGTGTCTCAATCAGTAGCAACTTCACCCAGGTTGACGGGCGCGTACTGCCTGCTCCTAAGGTATGCTATCTATTATAACTTCTTTTAGCTATATTTTTGAGTCTTTATGTAGTGAGTTTGAGGTAATATATTCTTTATGTGGCAGTTGAAGGCTGGAAATGGAGATGACCTTTTCACCCGGAATGGAAGGTGGAACTTTAATAATAAGGTATAGTTGAACTCTTCTTCACATATGATTTTTCCGCAGGATCTATGGGGTTCATCTCATAATCTCATTTAAGATGATATTGGCTTTGAAATCGTATGATGACATGCTAGCTTGGTATTGCAGTGTAGTGGTTGTTAAGATGTGCTTTGAGTTTTTTTCATTTCATCTATTCTGCAGAGATTCTTTGAGCCAGCAAAGGTAGAGCGTTGGGCTGTTGTGAACTTTTCTGCACGCTGTGATGTCCGTGGTCTAGTCAGAGATTTGACAAGACTTGGAGAGACGAAGGGAATTGTATGTTTTATCAACTTCTGATACTTAAAAACTGAGAAGGAAGGACGATTTCATTATTCCTGTTTTAACGTTACAGAGTGTGGAAGCTCCATTTGAAGTGTTTGAAGAGTCTCCACAGCTTAGAAGGGCTCCACCTGTTGTCAGAGTTGACAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGGTGCCCCCAAGTTTCTTCTCTGTCTTCTTCCTGAGAGGAAAAATTGTGACATATATGGTTAGTCCGATTTGCTTGTTCTGTTGACCACTAAGCTTATCTCATAAGTACTAATTACTAAAACAATTGACTGATGAAACTTGAAGGTCCATGGAAGCGAAAAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAGGTGAGAGTTCTCTGTGCATCTGGTTCAGTGCTATCATCCTGGCACCTTACTTTCTTCCATCATTTCCTGGATCAGTCTTAAACATCACAGTTTCTGTTGGCAGCTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCAGTAGGTTCTTTCATTGACGTTGCTTACCTTTATACCCAATTTTTCAAAGAATTTCATTTTATACGATTGCTTTGTCAGGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAGGTGAGTTTGGTTTTTGTAGGTTTAACTTTATCTTGGATTGTTTTCTATTGGGTCAGGGTGAATTAACATTGGCCGTTCAGAACTTAATCTTATATGATAGAGTATGCTATGCTTTCTAACATATACATTTTGATCTTTGAGTCGCTTTAGCTGCACTGGAGATGAATTTATTTTTGTGGTGATATTTACATTTTGCATTTCGACTCTTGAGGGAGTTGCTTCACCAGAATTGTGATGCCTTAATACTTTGTTAGTATGGATTGAGTTTCTTCATGCCGAATGAGCTCCTCACTCAAATACCACTGGTTCCGTGATTTTCTGTATAATCCATACCCAGCTGTATTGCACATCTTTCTAATCAGTATATTATGCATTTTAAAGTTCGTTTTCTCTTTCCAATGGTTTGCTGCTATTTCTTATGGTTTAAAACTAATAGCCTAATGGTTTGCGGGTTACTTTTACAATTCTGTTGGTGGTATCCTTTTGGTTTCCCAGAATTAACTTGCTGATAATACTTAACCTTTATAATGCAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAGGTTCTGCACTCCGATAAATGCTGTCTTAATATATAATTTGGATAATACTAGAGATTCTCGTGCTAACACATCTGTTCTATCCATGTAGGCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAGGTAATAATAGAAGTCGCAGCGAATTATAGTTGTAACGAAAGCACTGGATCAATTCGTTTACACAGATTTTTTGCAGGGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATTGTGAGTTATTTGTTCTGTTTTGTGCCAATTCATTGAAGTTTGGTGTTATGTTTATATCATCATATGATGTTTACTTGGATATTGCTGTGTAGGGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGTGTAAGTATTGCATAAATTGGATTCTTCGAAGCTGGCCCGAGTTTTGAACTTTTAAATCATAGCAGTTGCAGTCAATTCTAATTATTATACACACTTCTTGCAGGTACCAAAGAAGCACTACTGCTATATCCATTGGTAAATATAAGCATATTTGTACAAGTGCTGTTATATTTTCCTTCAGCTTGTGCCCTCACTTCCTTTTCCACATTATATGCAGTGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAACAACTTAGTTATGCGGTACAATACTAGGTCTGTTGCCATATTCAGGTCTCATGCATATTTTTCGCGCTTCTGTTCTCCTGAACAATTTTGCTATGTATCTGTAAAATGCATAGAGATTAACCTGGTGGTGTGACTATGCATCAATTATGCTTTTTTATATGTAAATGGTAATATATAACTTGTTTTTTTCCCGCTTTTATTAGGGAAGTTATTTTCCTCGTTTTTAAGGAACTTGTTTTTTGCAAAAAAAATATTTTTTTCAACTAACTAAACCAAAAAAAACAAAAAGTATTTTCTTTGATACTGATTAGACACACTCTTAACCCCACCTTTGTTAGAAAATGTTTGTTGTAAGTTACAAAAAATGGTATTTTGAAAAATAATTTTTATGCAAAATTTAAGCGACTTTTTCATTATTTCAAAAAAATAAATAAATTTGGAGATAAGCAAATAAAAATTGGATAACAGTCCGTAAAATTTTCCAGAATAATAGTGAGAATATCTATAAATTTTTTATAGTCTGAATTAGTCCAATTTTCTCTCTTTTGTAGCTAAAATCAGGAATACCTATATTTTTTCAATCAAAATAAATCCATTCTACCTCAGTTCACATCTATTAAAAAAAAATTAATATAAAATAAAATCTA</genome_strand>
        <mrna_strand>GCGAAAAACCTTGTCGTGAGCAGAT.............................................................................................................................GTTTACTCTAAAGCAGAAGAGCAAAGATGAGGATGGTGAAGTGCAAACTTCAGAAGTGACTGTTTATGATTACTTTGTTAATCATCGTAACATAGACTTGCGATATTCTGCCGATTTGCCGTGCCTCAATGTTGGAAAGCCTAAACGTCCTACCTATTTCCCCATTGAG....................................................................................CTCTGCACTTTGGTCTCATTGCAAAGGTACACAAAAGCCTTGTCCACCTTTCAGAGGGCTTCCTTGGTGGAGAAGTCCAGGCAAAAGCCTCAGGAGAGAATGCAAATTTTGAGCAAT.............................................................................GCTCTCAAAATCAACAATTATGATGCTGAGCCTCTGCTTCGTTCTTCTGGTGTCTCAATCAGTAGCAACTTCACCCAGGTTGACGGGCGCGTACTGCCTGCTCCTAAG.....................................................................................TTGAAGGCTGGAAATGGAGATGACCTTTTCACCCGGAATGGAAGGTGGAACTTTAATAATAAG.................................................................................................................................................................................AGATTCTTTGAGCCAGCAAAGGTAGAGCGTTGGGCTGTTGTGAACTTTTCTGCACGCTGTGATGTCCGTGGTCTAGTCAGAGATTTGACAAGACTTGGAGAGACGAAGGGAATT............................................................................AGTGTGGAAGCTCCATTTGAAGTGTTTGAAGAGTCTCCACAGCTTAGAAGGGCTCCACCTGTTGTCAGAGTTGACAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGGTGCCCCCAAGTTTCTTCTCTGTCTTCTTCCTGAGAGGAAAAATTGTGACATATATG......................................................................................GTCCATGGAAGCGAAAAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAG.......................................................................................................CTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCA..............................................................................GTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAG........................................................................................................................................................................................................................................................................................................................................................................................GGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAG........................................................................................GCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAG............................................................................GGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATT............................................................................................GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT.......................................................................................................GTACCAAAGAAGCACTACTGCTATATCCATTG..................................................................................TGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAACAACTTAGTTATGCGGTACAATACTAGGTCTGTTGCCATATTCAGGTCTCATGCATATTTTTCGCGCTTCTGTTCTCCTGAACAATTTTGCTATGTATCTGTAAAATGCATAGAGATTAACCTGGTGGTGTGACTATGCATCAATTATGCTTTTTTATATGTAAATGGTAATATATAACTTGTTTTTTTCCCGCTTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313965" ref_strand="+" ref_description="SGN-U313965        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | PAZ domain-containing protein / piwi domain-containing protein, similar to SP:O04379 Argonaute protein (AGO1) {Arabidopsis thaliana}, SP:Q9XGW1 PINHEAD protein (ZWILLE protein) {Arabidopsis thaliana}; contains Pfam profiles PF02171: Piwi domain, PF02170: PAZ domain | chr5:7139894-7144274 REVERSE | Aliases: T10F18.3(evalue: 5e-23, score=104) genbank/nr: AGO4-1(evalue: 1e-28, score=129)">
      <seq>tttatacccaatttttcaagaatttcattttatacgattgctttgtcacgttgtgagttcaaggcagtggccgtcaatatctcgttatagagcttcagtgcgcactcaatctcctaaagtggagatgattgataacatatttaaaaaagtttcagacactgatgatgatgggattatgagggaacttttgctagatttttatgtgagttccgggaaaaggaagcctgagcacattatagtattcaggtgatctaacccagcctgttcaccattttgctttcagcaaattatatacattctaagtgctattgctcttttattgacactacacttgtgatgaatgtctaaatcttcagaaatttttattgagcatgacattggtgagtttttatggttctacctcattttctgccatttttatcccgtttatctattgttttagaggattcatgtagctgacctaactcttgggcatgaggagtagctcttgatatttctcttgttccatcgtttgttgttattaccactaccgtgtgttccacctgcctaacattgtcacgtagcagtgaactttgtacacttctttgacggttttgctattggccccttttgaaaatgtcagggatggtgtcagtgaatctcaatttaatcgagttctaaacatagaactggaccagctcattgaggcctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="106053" stop="104233"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105753" g_stop="105573" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="180" r_length="180" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="105039" g_stop="104534" g_length="506"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="686" r_length="506" r_score="0.998"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88">
            <donor d_prob="0.946" d_score="0.98"/>
            <acceptor a_prob="0.929" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104445" g_stop="104440" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="687" r_stop="692" r_length="6" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-U313965" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U313965" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105753" e_stop="105573"/>
          <exon e_start="105039" e_stop="104534"/>
          <exon e_start="104445" e_stop="104440"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTATACCCAATTTTTCAAAGAATTTCATTTTATACGATTGCTTTGTCAGGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAGGTGAGTTTGGTTTTTGTAGGTTTAACTTTATCTTGGATTGTTTTCTATTGGGTCAGGGTGAATTAACATTGGCCGTTCAGAACTTAATCTTATATGATAGAGTATGCTATGCTTTCTAACATATACATTTTGATCTTTGAGTCGCTTTAGCTGCACTGGAGATGAATTTATTTTTGTGGTGATATTTACATTTTGCATTTCGACTCTTGAGGGAGTTGCTTCACCAGAATTGTGATGCCTTAATACTTTGTTAGTATGGATTGAGTTTCTTCATGCCGAATGAGCTCCTCACTCAAATACCACTGGTTCCGTGATTTTCTGTATAATCCATACCCAGCTGTATTGCACATCTTTCTAATCAGTATATTATGCATTTTAAAGTTCGTTTTCTCTTTCCAATGGTTTGCTGCTATTTCTTATGGTTTAAAACTAATAGCCTAATGGTTTGCGGGTTACTTTTACAATTCTGTTGGTGGTATCCTTTTGGTTTCCCAGAATTAACTTGCTGATAATACTTAACCTTTATAATGCAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAGGTTCTGCACTCCGATAAATGCTGTCTTAATATATAATTTGGATAATACTAGAGATTCTCGTGCTAACACATCTGTTCTATCCATGTAGGCCTGC</genome_strand>
        <mrna_strand>TTTATACCCAATTTTTC-AAGAATTTCATTTTATACGATTGCTTTGTCACGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCGAGTTCTAAACATAGAACTGGACCAGCTCATTGAG........................................................................................GCCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U322065" ref_strand="+" ref_description="SGN-U322065        Tomato 200607 #1 [8 ESTs aligned] arabidopsis/peptide: | Symbol: None | PAZ domain-containing protein / piwi domain-containing protein, similar to SP:Q9QZ81 Eukaryotic translation initiation factor 2C 2 {Rattus norvegicus}; contains Pfam profiles PF02171: Piwi domain, PF02170: PAZ domain | chr2:11543612-11549431 REVERSE | Aliases: T20P8.9, T20P8_9(evalue: 3e-100, score=361) genbank/nr: AGO4-1(evalue: 4e-132, score=473)">
      <seq>cttttattttctcttttgtcgtacattagggtttcacctcttcactctgtttcttcatccgccatttttgagctttagaagattgtggtaatggctgaagaagagaatggtggatccacagaggctctgcctcctcctccccctgttccacttaatttctctcctgcacaagctgaaccagagccagtgaagaagaaggttttacgtgttcccatggcaaggcgtggccttggaagcaagggacaaaagattccgatccttaccaatcactttaaagtgaacgtgtctaatgttgatggacacttctttcattacagtgttgccttattttatgaggatggtcgacctgtcgagggaaaaggcattggcagaaaagttctggatagagtgcatgaaacatatgatacagaattggctgggaaggattttgcatatgatggggagaagagtttgttcaccatcggttcactacctagaaataaactagagttcacagttgtactagatgacataacatctaatcggaacaacggtaccaatggcaactctagccctggcagacatggaagccctcctaatgaaactgataggaaaagattaaggcggccataccaatctaaaacttataaggtggagattagctttgctgccaagattccaatgcaggcgattgcaaatgctttgcgaggtcaagagtctgagaactctcaagaagccttgcgagttttggatataattttaaggcagcatgctgcaaaacagggttgtttacttgttcgtcaatcctttttccataatgatcctaagaactttgctgatgttggcggtggtgttctgggctgccgagggttccattcaagttttcgtaccacccagtcgggattgtcattgaacattgacgtgtctaccactatgataatccaacctgggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="109406" stop="107523"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109104" g_stop="108865" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="318" r_length="240" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108864" i_stop="108767" i_length="98">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108766" g_stop="108561" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="524" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108560" i_stop="108480" i_length="81">
            <donor d_prob="0.113" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108479" g_stop="108243" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="761" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108242" i_stop="108069" i_length="174">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.441" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="108068" g_stop="107932" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="762" r_stop="898" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107931" i_stop="107856" i_length="76">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="107855" g_stop="107823" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="899" r_stop="931" r_length="33" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-U322065" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>853</cumulative_length_of_scored_exons>
        <coverage percentage="0.916" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U322065" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109104" e_stop="108865"/>
          <exon e_start="108766" e_stop="108561"/>
          <exon e_start="108479" e_stop="108243"/>
          <exon e_start="108068" e_stop="107932"/>
          <exon e_start="107855" e_stop="107823"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGTGTATGTTTTCACATACCTCTCCTTGATATGCTCCTATCTTTTCTCTTCTCAATACAATCATGCAACTCCATGCCATTTTTAACAATATCTGATAACAGGTTGCCTTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCGGTTGGTTCTCAGAGGCTTAGTTTAATGTGTTCCCTAGTTCTTATTTTGGTTGTTTGACACTTTTTATCATCTTATATACAGGAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCATACCAATCTAAAACTTATAAGGTGGAGATTAGCTTTGCTGCCAAGATTCCAATGCAGGCGATTGCAAATGCTTTGCGAGGTCAAGAGTCTGAGAACTCTCAAGAAGCCTTGCGAGTTTTGGATATAATTTTAAGGCAGCATGCTGCAAAACAGTAAGTTATGTGTCTATTACTACAGAAGTATTTTTGTGCGCCTCTTGATTGTTACATAATGACTTTTCTTATATTGGGGGTTGTTTACTTGTTCGTCAATAGTTATGTGTCTATGACTACAGAAGTATTTTTGTGCCTCTCTTGATTGTTACATAATGACTATTCTTATATTAGGGGTTGTTTACTTGTTCGTCAATCCTTTTTCCATAATGATCCTAAGAACTTTGCTGATGTTGGCGGTGGTGTTCTGGGCTGCCGAGGGTTCCATTCAAGTTTTCGTACCACCCAGTCGGGATTGTCATTGAACATTGGTAAATATCTATCTTTCATGTTTCATACTTATCTCAAATGAAATGAGGTTCATATTTTGTGTTTCCTTGATCACAGACGTGTCTACCACTATGATAATCCAACCTGGGC</genome_strand>
        <mrna_strand>AAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGT..................................................................................................GTTGCCTTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCG.................................................................................GAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCATACCAATCTAAAACTTATAAGGTGGAGATTAGCTTTGCTGCCAAGATTCCAATGCAGGCGATTGCAAATGCTTTGCGAGGTCAAGAGTCTGAGAACTCTCAAGAAGCCTTGCGAGTTTTGGATATAATTTTAAGGCAGCATGCTGCAAAACA..............................................................................................................................................................................GGGTTGTTTACTTGTTCGTCAATCCTTTTTCCATAATGATCCTAAGAACTTTGCTGATGTTGGCGGTGGTGTTCTGGGCTGCCGAGGGTTCCATTCAAGTTTTCGTACCACCCAGTCGGGATTGTCATTGAACATTG............................................................................ACGTGTCTACCACTATGATAATCCAACCTGGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U341960" ref_strand="+" ref_description="SGN-U341960        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | endonuclease-related, similar to endonuclease III (Homo sapiens) GI:1753174; contains Pfam profile PF00633: Helix-hairpin-helix motif | chr2:13408209-13411254 REVERSE | Aliases: T28P16.6, T28P16_6(evalue: 4e-05, score=37.7)">
      <seq>gcacgagtttgttttaaccaaaaatgtctgtctctcttctgagaaacactgcgtgacttgcctcaatctcacttggaattcaccccatttcctcagccaaaatgcgaagaacacgaagttccctcaaccaagaaaccccttctcagaaaaacccaggttgtgatggcacaggtggaagctccgttcctgaactccgtgttttcatccgaagaaagagagttaaaaagactgtggaagtcatagccaaagaggtcaaggaagaatcttctggcaaaaaagttatgcttgttagactgcctgatatagaggatttttcctattcgaaggacattacacatccccagtcaacaccttccaaaactgtgcgtttgacaggagaaaaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="-" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="110686" stop="109227"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110388" g_stop="110233" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="156" r_length="156" r_score="0.936"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110232" i_stop="110109" i_length="124">
            <donor d_prob="0.854" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110108" g_stop="109981" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="284" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="109980" i_stop="109591" i_length="390">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="109590" g_stop="109527" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="348" r_length="64" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="-" ref_id="SGN-U341960" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>348</cumulative_length_of_scored_exons>
        <coverage percentage="0.902" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U341960" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110388" e_stop="110233"/>
          <exon e_start="110108" e_stop="109981"/>
          <exon e_start="109590" e_stop="109527"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATGGTTTTGTTTTAACCAAAAATGTCTGTCTCTCTTCTGAGAAACACTGCGTTTCTTCCCTCAATCTCACTTGGAATTCAAACCATTTCCTCAGCCAAAATGCGAAGAACACGAAGTTCCCTCAACCAAGAAACCCCTTCTCAGAAAAACCCAGGTCAGCCAAACAATAAAGAATCCATTTTTGAGTTTAAAGGAGGCAACTTTTTTGAGGGGATGGGGGTGAGATTTCAGCTATTGTTGGAAAAATTTCTGTAATATTGAAGTTTTTCTGTGTTCAGGTTGTGATGGCACAGGTGGAAGCTCCGTTCCTGAACTCCGTGTTTTCATCCGAAGAAAGAGAGTTAAAAAGACTGTGGAAGTCATAGCCAAAGAGGTCAAGGAAGAATCTTCTGGCAAAAAAGTTATGGTATTCCTAAATCTATATTACTTTTGGATTGAAATGGTTGTAACTTATATTTAAAAGAATTAACCTAAATAAACGTCCAGAATCCATGCATAAAATGTGTATAGTTGTGTATAAGTCTGTAAGATATGTATACCGTCTAGAAAAAATGAAATGCGCGGCTCTTTGTGTGAAGATACTTTGTATTTAAGTGTATTTACAGAGGGAATAGACTTGCAGAACTTTTAGCATCCAAATTCAGAGTCTGGTAGTGCATCTAACTGATTAAAATTTTAACCATCTCGAGATACTTTTTGCTTTGATCGTTTGAGTTGTTTAAGGTTAATTTGATCATTTGGCTTTCAGTGACGCAAAAGGAAAGAGAACTCTCTGATCTTTTTTTGGCTTTTGCAGCTTGTTAGACTGCCTGATATAGAGGATTTTTCCTATTCGAAGGACATTACACATCCCCAGTCAA</genome_strand>
        <mrna_strand>GCACGAGTTTGTTTTAACCAAAAATGTCTGTCTCTCTTCTGAGAAACACTGCGTGACTTGCCTCAATCTCACTTGGAATTCACCCCATTTCCTCAGCCAAAATGCGAAGAACACGAAGTTCCCTCAACCAAGAAACCCCTTCTCAGAAAAACCCAG............................................................................................................................GTTGTGATGGCACAGGTGGAAGCTCCGTTCCTGAACTCCGTGTTTTCATCCGAAGAAAGAGAGTTAAAAAGACTGTGGAAGTCATAGCCAAAGAGGTCAAGGAAGAATCTTCTGGCAAAAAAGTTATG......................................................................................................................................................................................................................................................................................................................................................................................................CTTGTTAGACTGCCTGATATAGAGGATTTTTCCTATTCGAAGGACATTACACATCCCCAGTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U325350" ref_strand="+" ref_description="SGN-U325350        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, identical to cDNA endonuclease III homologue (nth1 gene) GI:11181951 | chr2:13406386-13408048 REVERSE | Aliases: T28P16.7, T28P16_7(evalue: 2e-59, score=225) genbank/nr: gi|21594204|gb|AAM65980.1| unknown [Arabidopsis thaliana](evalue: 2e-57, score=225)">
      <seq>aggatttattggatgcgtttgctgacagagtctctaaacctcgcctctttatgacagacaagatgcaaattgctcttgctgggggtttgggacatggtgtggctcatgctgtgtttttctgccttggccttttgacacctgcatttggaccagcgacatactatgtagagaaatgctcaaagatacccttttttcttgtttctgctattatagcccttgcctttgctaccatccacactttctccatggttattgcattcagtggatatgaagaaggaaacaaagtggaccagtgttttgctcctgttgttcacttaattgctggcatgttgacactgacgaatcttgcatttggaggctgcatgattggcattccactcctctattgtgtagcaatcgtgaccttggtacattgcggaaagatggcatggaggagattgatagaaagccgaaacagggaggggaacttcagcaatagccaataagcaaggataataaccttttttgtattactgagaagtgtaagattagtaattgccagatatatctaatgcttggagcatttgccaagggtgactcaaagaagagactagtaaatcttttgttttaggcctccaaaaatatttcatagtcaactttatattggccaaataaatattcgggccactcaaactttacatgaattttcgttgtaacacctaacatttgccttgtacctattgaacacctaatattacaagaatttatgtctattcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="113338" stop="117588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113638" g_stop="113715" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113716" i_stop="115314" i_length="1599">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="115315" g_stop="115440" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="204" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="115441" i_stop="116210" i_length="770">
            <donor d_prob="0.838" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="116211" g_stop="116338" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="332" r_length="128" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="116339" i_stop="116860" i_length="522">
            <donor d_prob="0.930" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="116861" g_stop="117294" g_length="434"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="766" r_length="434" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-U325350" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>766</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U325350" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113638" e_stop="113715"/>
          <exon e_start="115315" e_stop="115440"/>
          <exon e_start="116211" e_stop="116338"/>
          <exon e_start="116861" e_stop="117294"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGATTTATTGGATGCGTTTGCTGACAGAGTCTCTAAACCTCGCCTCTTTATGACAGACAAGATGCAAATTGCTCTTGGTAGAATACTGAACATTTTCGCTACATGTCTTGTAAATTCTAGTATTTAGTTTTGATACTTTTTCTATCTCCCCTAGAATTTTTTTTTTTTTTATAATTTTCTTTTTTTCACTAAGGTACCTAAATGGGGAGGCTAGGGAAAATGAGTGTGGAAGACTTGTCACAATGATCTGAAAACCCCTAGGGCCTAACCTTAACCCAACCCAATAAGCGGGAAAATAAAAAGGTGGAAGCAGCTCGCCTACCCATTGAGGGTGTACCTTTTTGTTGCAAAACATGTTACATTTTAGTTTCAGAGCATGCAACAGTGCAGCAAGCTCGTACTATATATATATATATATATTGGTCCAACAAGACAGCAATTCTTAGATCGAAAACAATAAAAGAGAAGAGATGAGATTGTAGAGAGAACATAGATACTTCCAGGGGTAGGTACAACCATTGGAGCTGCAGCTGCTATTGCGTATTAGTCGTTGGGTGCTTCTAAGATTTCACTGTTGGCGACATATTTTAGCATTAAAAATGAAATTGTTGATATCATATAACTGAAGATCCCATAGCACCATGCAACTTCTAAACCTTCTTTTCAGCTCTGCACTTAACCAATTGATCTTCTCCAGTGGAAACAGAATTGAACAAGAAAAACCTCAGCATATTTAACGGAAGCTAAAAAGGAACTTGCTAATAACTGATGCATCACTTATGCAACTTTTAGGTCTAATTGATTGACAAGTTAAGAACAATTTCCTAATAACAAAATCATCTTGATGGTTTCTGATGTTGTACAGATAAAAGGATTCTAATAATATCATGAAAACACGTCCGACCATAGGAAACTTGAAGATGCTATTAGTTGCACTCTCTCTATTGGACTGATGCAATTGAAGTTCTGTTTAGATATAGGCAGGCAAAGTGGGACTTAGTAGCTGAGATTGATGTGCTGGTTTCATTTAACCGAGTGTTAAATGGACCGAGAGACTGTCAGTTGGAAAGGAGTTGAAAGTTGAAGGAGGACAGTAAGGGATTAGGTTATTGATTGAGGAAAGGCATGTTCAATGAGATTGGGATGGAAAACGCTAGCTTTTAGAGTTTAGATGACTGAGGTTTAAGTTTTAACTGCTCTTTCTTTTTTCTGAAGGTTTAGATGTTGCTAATCTGATACTTCTATAAGCTACTTCTACTAGATGGTATCAAGTATTGGAGTGTGAAAATAAAAAGATAAAGGAGTTATCTTAAAAACTATTCTGCAGTTTTCTCTATTTATACAACCCTCTTTGCCGTTTAAATTGGCAATAGATGTTCTATTAATTAGAATAAGCATTTTTAAGGGCCATTATTGTTCAATATGATTCTGAATCCGCTGAGATGTCGAAAATCATGCTGCACCCCGTGATGTTAATTGCTTGTGGCCGCTTTATCTGGGATACTATTACTGTTTGTACCCCTTTCCAGCTCCAAGTTGTTTCAACTTTCGAATATTCTTTTGATCTTTCCATTTATGGTGAAGGCAAACTACCTTACTGCTATTAGATATCTAGTGTAGTTTCTGATATTCTATTTGTTATCTGACACTAACATCTGATATGAGTTGACATGCAGCTGGGGGTTTGGGACATGGTGTGGCTCATGCTGTGTTTTTCTGCCTTGGCCTTTTGACACCTGCATTTGGACCAGCGACATACTATGTAGAGAAATGCTCAAAGATACCCTTTTTTCTTGTTTCTGGTAAGGGAATTCTGCTATTTCTGAGTTCCTCTTTTATTCTTTTGGAATTAGCTTCTGAGTACCTTGTATTATTGATCTTCAGCAAACTCTATATTTGAAAGATCTTCAGAACCAAAGTTTAAAGCAGTGAATGGAGTAACTTAGGACCATTATAAACTTCTTTGGATATCCTTACACAACTAATGAGGGACAATTGTTATCTTTAACCCTCCCGTCCCCCCGTCCCCCCCCCCCCCTTCCCAAACACACACACACACACACTCACACTCGTGTAACCCGGTTCTAGAGCATACACGTGGACTTTAACATTTTTTTTAATTCCATGTTCTTTTTTAAATAGATTAAATAGTGGGTTTATAGTAGAGAAAGACTAGTCTCAACAAGTTGAAGAGTGTCCCGGAGCATAGAGATAAAGAGAGAGTAGGCTCAACAGGCTAAAGAGTGGAAATGGAGTAGGGAGATAGTGAGAGAATAGGCTGAAGATTCAATCAAGAGAAGTGAGTGACTCAACACACTATATTGGGATAGAGAAGCCTAGAGGTGCTTGATGGCCTAAGTTGAGATATAAAACCCTACAGAGATAAAAACAAGTAGGGATGAAGTATGTGTGATGGCGAGCTTACCTAAAATTTTGGGTTCCCTTTTCTTGGGGCTGCAACTATGGTTTTAACTTAGAAAAATAGTGTAAAGTATAGTGCATGTTGCCATAGTATTGCTTACTACCTCCATATTTATGCAGTCTTAACACTATTTGGCATTTTAAATTGCAGCTATTATAGCCCTTGCCTTTGCTACCATCCACACTTTCTCCATGGTTATTGCATTCAGTGGATATGAAGAAGGAAACAAAGTGGACCAGTGTTTCGCTCCTGTTGTTCACTTAATTGCTGGCATGTTGGTAAGTATCCACATAATTGTGTATGCATACTTGAAGAGTGCAAACTAAACCTGTCGAGCAAACCAACTACTAAACTGAATGATACTACAGATCTTGTAACCGAAACTTTCCTAAATAGATCTGCTAGTTTTTTGGAGGGCTCTAGCATGAAATCAATATAGAAGCAGATAGTTTTAGCATTTGGTGTGGCTTCTGAATTATTTTGGATTAAAATGTACAAAGTCAATCATAACAGGTTACTTACATTCTTGGTTACCGAGAGTTATAGCTTCTACGTTTTTGATGCGCGAATATCTATAGTACAGGATCTCCAAAGAGGTCCATTTCTTCTTATTTCCTTGAAATCAGTGACTTGACCCATACTATTCAATGTCACTTGCTGATTTCATCTAATGTAGCACAGTTGATCGAGTTTATCAATCGTGCTTCCCTCTGTAGATTTACTATTTCGATGAAAAACTCGAGCAATGTGAGTGCATTTTTTGATTAAATGACGATTGATGATCTCTGGTTTGTTTTCAGACACTGACGAATCTTGCATTTGGAGGCTGCATGATTGGCATTCCACTCCTCTATTGTGTAGCAATCGTGACCTTGGTACATTGCGGAAAGATGGCATGGAGGAGATTGATAGAAAGCCGAAACAGGGAGGGGAACTTCAGCAATAGCCAATAAGCAAGGATAATAACCTTTTTTGTATTACTGAGAAGTGTAAGATTAGTAATTGCCAGATATATCTAATGCTTGGAGCATTTGCCAAGGGTGACTCAAAGAAGAGACTAGTAAATCTTTTGTTTTAGGCCTCCAAAAATATTTCATAGTCAACTTTATATTGGCCAAATAAATATTCGGGCCACTCAAACTTTACATGAATTTTCGTTGTAACACCTAACATTTGCCTTGTACCTATTGAACACCTAATATTACAAGAATTTATGTCTATTCAATAATCGTAC</genome_strand>
        <mrna_strand>AGGATTTATTGGATGCGTTTGCTGACAGAGTCTCTAAACCTCGCCTCTTTATGACAGACAAGATGCAAATTGCTCTTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGGGTTTGGGACATGGTGTGGCTCATGCTGTGTTTTTCTGCCTTGGCCTTTTGACACCTGCATTTGGACCAGCGACATACTATGTAGAGAAATGCTCAAAGATACCCTTTTTTCTTGTTTCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTATAGCCCTTGCCTTTGCTACCATCCACACTTTCTCCATGGTTATTGCATTCAGTGGATATGAAGAAGGAAACAAAGTGGACCAGTGTTTTGCTCCTGTTGTTCACTTAATTGCTGGCATGTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTGACGAATCTTGCATTTGGAGGCTGCATGATTGGCATTCCACTCCTCTATTGTGTAGCAATCGTGACCTTGGTACATTGCGGAAAGATGGCATGGAGGAGATTGATAGAAAGCCGAAACAGGGAGGGGAACTTCAGCAATAGCCAATAAGCAAGGATAATAACCTTTTTTGTATTACTGAGAAGTGTAAGATTAGTAATTGCCAGATATATCTAATGCTTGGAGCATTTGCCAAGGGTGACTCAAAGAAGAGACTAGTAAATCTTTTGTTTTAGGCCTCCAAAAATATTTCATAGTCAACTTTATATTGGCCAAATAAATATTCGGGCCACTCAAACTTTACATGAATTTTCGTTGTAACACCTAACATTTGCCTTGTACCTATTGAACACCTAATATTACAAGAATTTATGTCTATTCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U334290" ref_strand="+" ref_description="SGN-U334290        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|3402817|emb|CAA07704.1| lacZ' [Cloning vector pGreen](evalue: 1e-26, score=123)">
      <seq>acttcttgaatcaagaagctagtctaaaagaatcttatggcatcttcattgtcaggtggtgtgtggtacaccgacatcaatactcagtgaaaattaacaagtatattatgtgtacgcacctttacctctacctttgttgtaccaccttgtatattatggatcaatgcaatgtaatgtggttgaggggaattttgcaactgcgtttattaaagctttggttgcaagttccccaatcgatgtgataggtcctctagtagtactagtctttcttcttttttttttgtatcaaagctggtgaaggtctaggaaaacattgaacgactttgctctagactttttgagcttaattgtattattatctaattaattaaaaaaattgtttggacgcaattatattttatatacagagtattttaatatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="124240" stop="125260"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="124540" g_stop="124960" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="421" r_length="421" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-U334290" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U334290" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="124540" e_stop="124960"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTCTTGAATCAAGAAGCTAGTCTAAAAGAATCTTATGGCATCTTCATTGTCAGGTGGTGTGTGGTACACCGACATCAATACTCAGTGAAAATTAACAAGTATATTATGTGTACGCACCTTTACCTCTACCTTTGTTGTACCACCTTGTATATTATGGATCAATGCAATGTAATGTGGTTGAGGGGAATTTTGCAACTGCGTTTATTAAAGCTTTGGTTGCAAGTTCCCCAATCGATGTGATAGGTCCTCTAGTAGTACTAGTCTTTCTTCTTTTTTTTTTGTATCAAAGCTGGTGAAGGTCTAGGAAAACATTGAACGACTTTGCTCTAGACTTTTTGAGCTTAATTGTATTATTATCTAATTAATTAAAAAAATTGTTTGGACGCAATTATATTTTATATACAGAGTATTTTAATATT</genome_strand>
        <mrna_strand>ACTTCTTGAATCAAGAAGCTAGTCTAAAAGAATCTTATGGCATCTTCATTGTCAGGTGGTGTGTGGTACACCGACATCAATACTCAGTGAAAATTAACAAGTATATTATGTGTACGCACCTTTACCTCTACCTTTGTTGTACCACCTTGTATATTATGGATCAATGCAATGTAATGTGGTTGAGGGGAATTTTGCAACTGCGTTTATTAAAGCTTTGGTTGCAAGTTCCCCAATCGATGTGATAGGTCCTCTAGTAGTACTAGTCTTTCTTCTTTTTTTTTTGTATCAAAGCTGGTGAAGGTCTAGGAAAACATTGAACGACTTTGCTCTAGACTTTTTGAGCTTAATTGTATTATTATCTAATTAATTAAAAAAATTGTTTGGACGCAATTATATTTTATATACAGAGTATTTTAATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313208" ref_strand="+" ref_description="SGN-U313208        Tomato 200607 #1 [13 ESTs aligned] arabidopsis/peptide: | Symbol: None | 40S ribosomal protein S29 (RPS29C) | chr4:16233214-16234201 REVERSE | Aliases: None(evalue: 8e-27, score=116) genbank/nr: gi|34915198|ref|NP_919056.1| putative ribosomal protein S29 [Oryza sativa (japonica cultivar-group)] gi|31745220|gb|AAP68880.1| putative ribosomal protein S29 [Oryza sativa (japonica cultivar-group)](evalue: 3e-27, score=123)">
      <seq>gtgagttctgcaaaagtagggttttcttgcaaacacatcgcgcagcctcgcttttctgtgaagatgggtcactctaacatctggaacgctcacccaaagaactacggccctggctctcgcacatgccgtgtgtgtggtaatcctcatgcaattattagaaagtatggactcatgtgttgcagacagtgcttccgcagcaatgccaaggaaattggcttcatcaagtaccgttaaaaatcttgaatacgagtttctacgaggacctctacatttggtgctggtagaagacatatggcattagagctttttgatttgcatctcccttcagttaaatgatgtaatgggataattttgatttatgttttaacttttggaagtaactgctatgtgaacctaagaaagactagcttttaagattttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacccgggggggggggccggaccccctttccccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0038F03-o4gBF/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0038F03.1" temp_strand="+" temp_description="C06HBa0038F03.1  AC219206.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0038F03 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125212" stop="153939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125512" g_stop="125636" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126648" g_stop="126747" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="225" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126927" g_stop="127121" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="420" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127122" i_stop="128297" i_length="1176">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128298" g_stop="128309" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="432" r_length="12" r_score="0.750"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128310" i_stop="137305" i_length="8996">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="137306" g_stop="137374" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="433" r_stop="501" r_length="69" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0038F03.1" gen_strand="+" ref_id="SGN-U313208" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0038F03.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U313208" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125512" e_stop="125636"/>
          <exon e_start="126648" e_stop="126747"/>
          <exon e_start="126927" e_stop="127121"/>
          <exon e_start="128298" e_stop="128309"/>
          <exon e_start="137306" e_stop="137374"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATGGTATCCTCATTCTTAAATCTCCTTTGTTGATTAAATTGCTGTCTAAATCAAGCTTTTGTTTCGTTACTGCTTGATTTTGTTGAATCACATACGCGAAAACTATATACTGTTTTTTTTTTTTGCTTCAACTCTGAGCCGTTTGTAATTTTTAGATAGAAATTAGATAAGATCTGAAAAGATTGTGTTATTCGATTGTTTCTATAATATCTAGAATCGAAACACACCTAACGGAGGCTAAGAAAACTGTGAGTAGTGTAATTGTGTAAATAAAGTGATCCTCTTGCTCATGTTAAGGGAATGGTATCCGAATGAAGTTATAGATTTGTGTCTAGGTTATGAGTGATGATTCAATACTCTAAATGTTTTACTGTTATGTTTTGATATCTTGATTTCCATGAAGAATAGGCTATTGTCATGTTTTGGAGTCTATGTCTGTGGCTAGGTTTTGTTAATTGAGTATTGTTGAACATGATTCCTTTAATTTGCTGTCAATGTGAGGTTTCTATATGTCACTTTAGAAGTAATGGAGTTGTTTGGTGCAAATAGAAATACATACAGAGGGATTTATACGAGTGATTAGAACTAGTGTAGTATTATTAGCATATACTTGATTGTTCTGATGATTGAAAAAAATTTTCAATCTCCTAAAACAGTTTCAAATTCTGTCTCTTTTAGTTCACAGGGAATGGTGAGTGGTGAGAATTTAGGATATTAGTGGTCTTTGATGTTAAAATTCATACTAGAATCTATCCTTTGCTCATACCTTCACATTCCCAATTGAAATGTTTTAGGTTTTGGATTTGCTAGCTCTAGAAAATCTCTATAATTGATTGCAACTGTTCAGTGTCAATAAATAAGATTTTCTTTGGTGATCATGTTTCGGTTTTTTCAAGTTTCTCTCTATGTATTATTCTATTTAGTTTTATGTACACTGTGCAACTAAAATGGTGGAAGTGAATTTGTTTACTGCCATTTCAGTAGTTGATCTTGAATTCCTTGTGCGTATTGCAGCCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATACACAGCATTCTGTATTGGAAATTCTACCAGAGTTGAAGTCTTTTTTTATGTAGCTATTTGAATCGGACACAAAATTATGTTTTGCCTGTATTTTCTTTGGTCTTAGTGCTATTAAGCTTTGATATGTTGATTCCTTCGTTTTGGCTAATCAAATTTTCTCTAATTTTGTTGCAGTACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTTATATTTTGTTCTATACATTCCTAATTTTTAGATTTTCAAGTTCAACTTACATTGATATTTCTCTGTATGTCTGAATATCTATCAGTCCCTGCCAATACATGAGATTTCATAATTAGGTACCCATAAAAAAAGTCGGTTAGTTAGGCAGTCCGTATGTTGGGGTGTTATAGGCACTGTATTATGTGAAACTAACGACAAGTCTTTAAAACTTATCTGAAAATATGCAAAAAATCATATCCAAAACTTAATTTGAAGAAGACTAATATAAACACTTGCCGTGTGTATGTCCAGGTGCTTAGCTTGTACAAATTATAATTCCAAGTGACTAAATGAAATTTAGTGAAAAGTTCAAAGAATAACTATCAATATATAGCATGTAGGACAATTGAGAACCAAAGGATAAAATTGATGATTGTGTTCACAATTTGTTACCAAATACCAATCACATGTTTCATACGGTGTATTATTATTATTTTTCTTTTGTTTTTAAACTCAAAATACACAATACTATCATATGCATCTACGATGATCATTATCTAAAAGGTTACTTTATTATAATGATTATGTGGTTTTTTTGTGAAATTTAATTTTCATACGTTATATGTTTGTTTGTGATAATTTTTTGTTATAGCAATAAAAATTATTGAAATATTTGATATTATTATAGAAATGTTTGATTATATATTTGATTTCTCCAATTGTGAATCTTTACGAATTTAACAAATTATCAAGTGATAAAATATACCGTGGTCATTATGTTATGTTAAGTTTGTATTGTTACTTCAAATAAGATAATATCAATTTCAAAAACAGTCTAATATCATCACTTGTAGAAAGAGAAAAAAAAAGCATATCTTAATTAATTAAACCCTAAGTATGCATAACCCCAAATTACAAGAATTAAAATAAAAAATTAAGAATAATTAAGGGATCAAAGAATAAAAGAATGGTTTTCATATCAATTTTTTTTTTTTTAAAAAAAAAGTTTAATGTACTATATGACATCATTTAACCATATAAGATGTAAGAGAAATGATATGGTTACTAAATTATACTTTTTGTGATATACATATAGTGAAGTAATAGCCTAATGTTTGAAATTCAAGATATAAGAGATAGTGTATCTCTATGATGTTAATTAATAAGTTTGATTGATTGATTTCTTTGTGTTCCTAGAGGAAAAAAATAATCTCCTTCAACAATATCGATCTTTTCTAGTTTAATTAAAATTGAGACTACGAGAGAGGTTCTAATTGACCTTTTATAACCAATTTATTCATCAGCACCGGAAAAGAGTCAAGTCCGAAAGTCACGAGTCTCTTTTCTCATTGGTTGCCAACAACAAATGTCAGTCAGATCTTTAAGTACTAGTCTTTTCTTCTCACCGTAGAAAGAAACTTTCATTTTAAAAACCATAACTGAGAAGTTCCCTTCCATTTTCTAAAATGTCTAATGGTCTGTTCTTTGACTATACAAATAAGTATATATTTGACTTTCTTGTCAATTGAAAAATCATCTTAGTTTTTCATCATAATTTCACCTCTAAGAGCCAAAATATATTTAATCAATTTTCTTATTGTCAAATAATTAATCGAAGGTTCTCGAAACCAAAATTTTCAACCATATATTCTTTATTTTTAATTAAACATGTCAAAATTTCCCATAGAATAGTCAATTTTCCATGTTTTAATAATTTGATACTACATTTAGGTGAGTGATCTTACAGCTGTCTTTAGAAAATATCTAGTAGTTTTGGAACAAATAACATCACAACAAAGGATCTAGTAGTTTCAATTCAGATTTTGTATATCAAATAAAATAATATATTATAAATTCAATAAATTAATTTAACAAAATTTCAAATCTAAATTCATAAAATTTAAATCATAAATCTCCGTTAATGATCCAAATTAGGCCAAAACTATTAAGTAAAGATAGGTTGACATCACATAGTTATATTATATATGAGATATTTTTTTATCAAACACCATACAACAAATAAGAATACTATAAGAATATTCTCAATTAATCATATTAGTTAGTGTAGTATTAATTAATCACAGCATGATGTATAATTTTTTCATAATTAATTATTGCATAACAAATAACATATACCAAATGAAATTTCAAAAGTGATAATGTATACGCAAGACTTAACCCTCGTAACATAAAAATAATTGAAACGATTTTTTAACTATATTTAACAGTCCAATGCATAGAATTTCATCTAACTCTCTTTAATCTAGTTAGTATAGTCATGACGTTCACTTTATCAAAATGTCAATGTTACGTTGGATCAAGTATATATTGAATAGTCTGAATATCAAAGAGATATTTTTATGTAAAAAAGTATAACAAAGGATAAATTATCCTTTTTTTCCATAGAAAAAATGTAAATTTGACTATTTTTACGATTAAATAATTGATATCACAGCGTTAATTTTTAGAAATATCCGTATTAAAAAAAAGTGAAATGAAATAATTAGAATTGGTCCAAATTAGGCTAACTAGTGATAGGCTGGCATCACACAAATTGTAGTATGATAATATTGATCACCTACCTGACCTATCACCTTCTATTTCTCCTCTTAAAAAATATTCTAGCAACATTCAATTTCGTAACGATTTATACGACTTATTTTAAATTATATATTTTCAGAAAGACATAATATATATATATGTAAATATATTTTTTAATTTGATTTCACGTGAAATTTATCTCTTTCAACTTTTAGAAGGTACTATTAGATTAATATAAAATGAAACAAATAAATACATGTATTTTATATATATTTTAAATGATAGTTAATGTTATTGCGTTAAATGTATTATACAACATAAAATATTTTTATTTAAATATATACTTGTGTACACCTAAAATTAGAATTGCACGCAGATTTTATTTGAAGCAAAGTTAAAAAGAAACATTATTCATTGTTCAAACAACCTCTAACCCTATGTATTACTCCAATTTATTGATTTATTTGTGTGTTTAATTATTTCTTCAATTTGGTAATCATTACTTATAATAGGTTTTCGTGCCTTATTTTTCTTTTTGTTTTCCCTATATTTCTCCCTCATCCATTGAATTTGGATAAGAATTTGGGGGGTATTTGTTTTCTTTATAGAATGGTCAATTTTGGAGGATAAAAACCAATTCATGAGGTATATCTATTTGTATAAAAAAAAACAAAAAAATATGTTGATATCATTTTCTCAACTTTTATATTCGATTAGGAAAAGTAATTGAGAATTTAATCGATTATTTATTCGTGTATATACTATGTTGAGATCATTTTCTCAACTTGTATTTGAATAATGTAATGCAGTATTATGTATGTGTTAGTAAATTTAACGAATCGATCGAAATTATCATTAACTTCTAAACTAAATAAAATGAATGAAATGATTTTAGCCATTATATTATTAAACGATGAAAAACAAGTTGGTGCCAAAATTTAAAATAAAAATGAAAAAATCAAATATTATAACTTGTGGTCCAAGATGTTTCGAAGGTGATTGATATATTTATGTGAAATAGTACAACATCATGTCAATGTACTAATCAATATGTCAATTGATTTAATCATAATTTACAAAATAAATGACATTTTTTTGTATTCAATTATCAATTTAACTTTAGCTTCTCATTTTATTCATTAAATAAATTATAACCACATAAATTTTTCTTATAACTTTTCTTTCTTTAATTATTAAGATTTTTTCAAGTAGATCTCTTTAAATTACAAGTTTCAATATTTTTATTTAAAATTTTTATATTTAATTAAAAAACCTTCGGATAAATTGAGACGAAATGAGTAACAAAATATTTTTCTTAGACAAAATTATGACAAGTAGGACAATTGAGAACCATAGGATAAAATTGATGATTGTGTTCACAATTTATTACCAAATACCAATCACATGTCTCATGTGTGACTTGACATGTTTCATACGGCGTATTTTTATTATTTTTTCTTTTGTTTTCAAACTTAAAATACACAATTTTATCAGATATATCTATTATGATCATTATCTAAAAGGTTAATTTATTATCTTTTCATAATAATTTATTATCTCAATGTTATAGTAACGAAAAACATTGAGATAGTCGATATCGTTACAGTCACTCTACATATTTTAACTAATTAAACGTTAGAGTATAATATGAAATTACAAGAATTTAATTTAAAAAAATTGAGAAATCGAAGAATATAAGAATAATTTACATATCATTTTAAAAGCATGTTTTGTTGGTTGAATTATAATTGACAAATAAAAATGATATTCTTTTAAGGGAAAATTGTGTATAATAGCAAACTAATAACCTAAATTAAATGGAATAGCTAGGGTTTGATTTAATTTAATTGTGCTCCATAGCAAACATAAGCTAAAATTTGCCAGCGTCTCTCTCCCAAAAATCTCGCTCGCCACTCTCCATTCTCGCTCGCCTCTCTCGCTTTATACACAGAAGTGTATAATTCTGTTTTTGTTTTGTATAGAGCGAGAGAAAATTGTATATACAATTGCGAATTATACAATTGCAGTGAAATACAATTTTCTCTAGCTTTATACAACAGAAGTGTATACATTGTGTTCCTGTTTTTGTATAAAGCGAGAGAAACATATATCTTCTTGCTATACACTTATAATTAGGCAACATACATACATTTTAATTCAATTCAACTGTATGCAAAACAAATTATACAATTGCAGCGAAATAGGCCAGTGAATTATACAATTATATATGTATAGCAGATTATACAGTTTTATGTGTGCTATGGAGCGCAATTATGTAAAGTTTGTTATACCATACAAATATAAATTTTTCATTTGCTATATGTAAAAGTTGCACTTCTTTTAAAGACGGACTAGTAAGGTAATTTAATTTTTTTTTGTCTCTTATTTTGCAAAGAAAACAGGTCCTTTAATGGGCCAGGGACCGTTGGACTTGTGGATTTGAAGGAGTTTGCTGAGTGGGCTGATTAAGACTAGCCACGTGGGTTGTTGGAATACCTCTTGTCTTCTAGTGAACCCCATATGCCAAATTATTGTTGTCAACGTGGCCATCAATATGGGACCCACACATTTTATGCTACCATACCCCACCCCCCACCCCCACCACCCTACCCCATGTAGAAAAGCTACTATCATGCATCATCATCATGATACATAATGATGTTGGATGTGATATATGGGTATTTTCACGACGTAATATATAAACGTGTTCTTTCATTTCATCTCAGCTGGTATCTATGTCTTTTAACTTTGTGTGTAGACAAGTAAACATGCTTTTAAAGTAATAAGAAAAATTATTCTTATGTGGCAAAATACAAATCAGTTTGAGTGTATATCATCTTCGTGATACATGATGATGAAGATTGTGATACGTGGGTATTTTCACGATATTATATATAAACGTGTTTTTTAATTTCATCTCAACTGGTATCTATGTCTTTCAGCTTTGGATAGGTAAAATTAAATACTCAAACTTATGTTATATAATCTATGTAGCATAATTTCGAAATAATATAATGTATATCACGTAATGTATATAACTTTATATAAATTTTTAAATATTATTTTATACATAACTAAAATAAAAGAATATAGATATCAGTTAAAGTCGATGTATGATATAATTTCTTTTTATTTTTATTTTTTTGTATGGATTTAGAAGACTTGGAGATTGACCCACATTATCTTCTTTAAATTAGCTTTATTTTGTGGTTCAATCAAACTTGGTTGCTATATTGGTTGTCCCTTTTTGTATTTTTGTTCTTTTGTTCCATAGGAGTTGGATCTAACTAATACAAATCAATTTTTAACATAAATTATGCAATTATTTAAGGCTCAAATAAAATATTACCACTAAACTTTCTCTTTCGTAAAAGTCATTTCACCAAAAAGTTCTATATAATATTACCTTTTTTAACCCAAAAAAGGCAATTAGTGACCTTAAAAATTAAGTTTAATTCGGATTAGGAAATTGTCATCATCTTTTGGTAATTTATTATATAAAAATAATGGCTTAATGGTCAAAATTCATAACTTAAATGACACGTATCATAAAATATTTTTAGGCTTATATTATTATAATAATAATAATATTATGTTTCTTTCTCTTTCGTAGTAGTCATTTTACAAAAAAAGCTATATATTATATTTTTCTTTTTACCAAAAAGAGCAGTTAATAATAATTAATTTAGAAAAATGAAGACTTGTTTGCCAAACGATAAAAGTTCTTTTTAATCTTATTTGGATTATAAATCGTCACCTCCTAATTATTTTATTCTATAATACTTTTAGGATATGATTCAATATATTAAAAACCCATCACTTGAATAACACGTATCATCAATTATTTCAGGCACAAATGATAATAATATCTTTTTTTCTTTTTAGTGAAAGTCATTTTTACCTTAAAAAAAACAGTTATTAATCAAGAAAAAATATTAAAATTATTGCTTCCTTTTAAAACAATAAAATTGTTATAAATACACCGTATTGAATATATCAGTATTTACTAAATCAGCTTATAATTAAGTACGTAGTAAAATTACACAACTGAGTTCTAAAGAGGATAAATATTAAATAAATTTTATCATTGCTTTATGGAGATAGATAGACTACTTCGAAAGATTCTCTACTTACGTCCAACACCAACATACAAATTCTAAAAAGTGACTTTTGCAATCAAATAAGTAGCTTAAACAAACCGCATCTNNTCATTTTCGATAAATTTTGAGCTGTTATTAATAATATAACGTTCCTTATTTTATATTTAACAAAAAGTAAAATGAAAAAAAAATATATAAAAGTTGTAATATATAATGGACCAATCATAATACAACAGGTATATAATCAATTAAAAGAACATTTATGGGGTTCTCTTTTCTATAGTGCTCCATACTAAAAATTCCAATGTAACATATACATTATAACTATAAAGGTGATGTTGCAACTAATAAGAAAACATATCTAACAGAGGCAAATTCAGTATTTAAAGATTAATGAGACAGTTATTATTTTAATATATGTCTAAGCAAAACTTCTAATAATGATTAAGAAGTAATATCGTGTGATATGTGTTAAATATAAGTGCTATAATACGATTGAATTATGCATCACAGAAAATATCTTCAAACTATATACACAATATTTTTTGAAACAAATATACGTGCGCCCTCGCTTATATATATATGTTGGGAAATTTATTTTATTTTTTATTGAAAAAATTATTTTAAAAAAGAGAGTTTTATTCTTTTTGTTGAAGAAAATTAGTTGTAATTAACACACAGCAAAACTGAGCTGGAAGGTCAAAATTGCTTAGAAATAAATTAAGACAGGGTGGAAAAAAGAATATTTACCTAAAAAGAATGATTGAAGTGGTTTACATTACTCGATAAAGAATCTGATTATGTTCGAATCATATAATATAATAATAATAACAGGTGTAATATTTTTATTTATTTAATTATAATGTATAAGATTTGTATTATATACTCAATCATTGACAAGTTGAAAGTATTTAATTTTTCTTCTTCTCCACATAATAACACCAAACATATCATGAGGACTCCTGAAGATCCCCATAATATGCGGATCAAACATTTATATAATAAAATGAGATAAGACGCATAAAAAATTAAATAAAAATATAAGTTACTGTCATCAAAATATATTGTTACGATTACGATTATCACTATCAATTATCATTACAATAATCAACTGCACAATTAATATATCACTGAATCACTATAATTATTCACCATTAACATATTTATGTATCTATCACTATGAATAACCATTGTTAGTGACTAATATCAACCAACATTACCATTAATTACTATCGAACAGTTAACGTCAATCAATACTATTCTCAATCGACGTCTACGAATCATCAATATATTGTCATAGTTTTTTTAAAAAAATATGTATTTATACAAACATATAGTATCAAACTAATTTAGTATTTTATTTAAATATTATATTTATTATTATTATTAAATATATATTCAAACATGAAAAATAAATAATTCCAATTATTTAAATATAAATCTTAATAATCAGAGAATTTAAACATCTAAATCTCTATATGTATTTTAATTAAGTTAGAAGCTTAATCTTTAACAAACAAAACTAGGTCTTAAATAATCTTGAAGTTAAAGTATCATAATGGCCTCTATACGAAGCTTATTTATGTTAATTGCTAGTCACCTATATATAACGCAAAAAATAAGTCACCCTGCTATTTTTTTGGTTTTTAAGAAAATGATATACAATTTCTTTTAGTCAGTTTCGAAAAAAAAGATCTTTTTTTTTATAGCGATATTTTAATTTCAACTTTCATATGACATATATCTAAGATCACAATATTAAAAAATATTTTGATATATTTGACATAACTATAATTTAGAATCATTGAATCAAATTTTTTTTATTTTTTTTAAAAAATTTCATATCAAAACTCAATAATTCTATTTTAAACAAATGAAGTAAGCTTGCTAATTTTTTTAATACCAATTTGTCTAGCAGTTCATTGGCTTACATTTGCGTGACTGTATTGCCAATGGTTCTTTTTTTTTTTTTAAAGAAAAATAAAATACATAAGTAATCAGTATGAGTTTATGGGTTTTATTTATTTTATATTCTTGGTAGAGTATGTATGAGTTTATGATTCTTATCTATATATAAAAATATAATAATTTCCCATGGATTCTGCTTGATATTCGGAAAATAACTGATTAAACTATGAGATTTTTTCTATTTATATACTATATATATATATATATATATATATATATATATATGGAGTTAACATTTATAGGCATATGACAATTATTATAATTAAAGCCTTTAAATGTCTAGTGTTTCTATTAGGGCTGTGTATCGGTTGGTTCAGTTTGGTTTTAAAGTTTAACGGGTTGGCTTATTGATTATCGGTTTGTAGAGATGCTAAACCGTTATAGAACCATTAAGATATTGGCTTATCGGTTATTGATTTTTCGGTTTTTGATCTTTATCGGTTCGGTTATCGATTTAACCATTAAGATTTGACACAAAAGAAAAAACATTGAAAATCACTTAGAAACAAGGTGACAAACCAAATAAACCACGCACTTGAGTTCACAAGTTACATCTTGCTCAAAAGCAAACACTTTTACATTGTAGAATAATCAAGTGTTTGAGATAATAAAAAATAAAAGTAGGAAATTAAACTCCTAGTCGAGGACTTTATATGCAAAATGATATAAATATAATTATTTTAATTTACTATCGGGTTGTCAGTTAACCCATTAAGAAAAAACTTTAAACCGTTAAGAACCAATAACCCGATAACAAAAAAAATCAAAATTGTTATCAAAACCACTAATCCAATAACCCAATACTACAAATCAATAACTTTTTTATCGGTTCGGCTTATCGGTTTCGGTTCGATTTTGAACGGCCCTAGTTTAAACCGTTAAGAACCAATAACCCGATAACAAAAAAAATCAAAACTGTTATCAAAACCACTAATCCAATAACCCAATACTAGAAATCAATAACTTTTTTATCGGTTCGACTTATCGATTTCGGTTCGATTTTGAACGGCCCTAGTTTACATTGGTAGAGCTAAATTTTGTTTGAGGTAAGTTAAATTAATATCGATCAAAAAATTATACTATATATTATTTTTCAAAATATATATCAAAATTTCTTGATTTTTTCCTTGCGTTTTATTTTTTAAAGAAATGGAGGGAGACTAGTGCAAAGACATGCAAAATATTGTCCTAGAGAAAATGGATATAATCTCATGAAATATGAAGCTATGTGGATTAAAATGCTGAATAATCTTTATATATGAATAAAAAGAGAAATTATTAATTATTCTGTTTTCTTAATAAACAAATCCAAGTCTTATCTTAAACTAGACAGGATACAGTCACCATTAATTAAGTTGCTTACAATAGGGGCATCAGAAAAAAAAAGGGCAAAATTGTATATAATCACTCATTTTGATTAAATATATGTGGTTGAAATTTTTCATTCTCGTATACATTAATATATTCAGCGAAATTTTACAAATAAAGTCTGAAAGGTAAAATATATGTATCCCTTATTCATACAACGTAGAAATAAAAGAGACTATTTCTTAAAGATTCTTCGCGCAAATACAAAAATTAAACATTCTAATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</genome_strand>
        <mrna_strand>GTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG...................................................................................................................................................................................TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCGGGGGGGGGGGCCGGACCCCCTTTCCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>26</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="13128" PGL_stop="20216"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13128" e_stop="13430"/>
            <exon e_start="14368" e_stop="14462"/>
            <exon e_start="15339" e_stop="15396"/>
            <exon e_start="15982" e_stop="16176"/>
            <exon e_start="16463" e_stop="16539"/>
            <exon e_start="17284" e_stop="17366"/>
            <exon e_start="17531" e_stop="17582"/>
            <exon e_start="18475" e_stop="18543"/>
            <exon e_start="18787" e_stop="18873"/>
            <exon e_start="18991" e_stop="19052"/>
            <exon e_start="19890" e_stop="20216"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.997" e_score="0.997"/>
          <exon-intron don_prob="0.936" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.702" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="0.943" acc_prob="0.874" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="13128" e_stop="13430" e_length="303"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="13431" i_stop="14367" i_length="937"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="14368" e_stop="14462" e_length="95"/>
          </exon>
          <intron i_serial="2" don_prob="0.936" acc_prob="0.979">
            <gDNA_intron_boundary i_start="14463" i_stop="15338" i_length="876"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="15339" e_stop="15396" e_length="58"/>
          </exon>
          <intron i_serial="3" don_prob="0.980" acc_prob="0.999">
            <gDNA_intron_boundary i_start="15397" i_stop="15981" i_length="585"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="15982" e_stop="16176" e_length="195"/>
          </exon>
          <intron i_serial="4" don_prob="0.702" acc_prob="0.998">
            <gDNA_intron_boundary i_start="16177" i_stop="16462" i_length="286"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="16463" e_stop="16539" e_length="77"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.997">
            <gDNA_intron_boundary i_start="16540" i_stop="17283" i_length="744"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="17284" e_stop="17366" e_length="83"/>
          </exon>
          <intron i_serial="6" don_prob="0.900" acc_prob="0.992">
            <gDNA_intron_boundary i_start="17367" i_stop="17530" i_length="164"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="17531" e_stop="17582" e_length="52"/>
          </exon>
          <intron i_serial="7" don_prob="0.983" acc_prob="0.954">
            <gDNA_intron_boundary i_start="17583" i_stop="18474" i_length="892"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="18475" e_stop="18543" e_length="69"/>
          </exon>
          <intron i_serial="8" don_prob="0.943" acc_prob="0.874">
            <gDNA_intron_boundary i_start="18544" i_stop="18786" i_length="243"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="18787" e_stop="18873" e_length="87"/>
          </exon>
          <intron i_serial="9" don_prob="0.956" acc_prob="0.985">
            <gDNA_intron_boundary i_start="18874" i_stop="18990" i_length="117"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="18991" e_stop="19052" e_length="62"/>
          </exon>
          <intron i_serial="10" don_prob="0.981" acc_prob="0.992">
            <gDNA_intron_boundary i_start="19053" i_stop="19889" i_length="837"/>
          </intron>
          <exon e_serial="11" e_score="0.979">
            <gDNA_exon_boundary e_start="19890" e_stop="20216" e_length="327"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13128" stop="13430"/>
              <exon start="14368" stop="14462"/>
              <exon start="15339" stop="15396"/>
              <exon start="15982" stop="16176"/>
              <exon start="16463" stop="16539"/>
              <exon start="17284" stop="17366"/>
              <exon start="17531" stop="17582"/>
              <exon start="18475" stop="18543"/>
              <exon start="18787" stop="18873"/>
              <exon start="18991" stop="19052"/>
              <exon start="19890" stop="20216"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U325721" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAATCAATTTTATCATCATAAAAACTTTATTATATAATCCTCGCAAAAAAATATTAATTTTTATTTTGAAGAACAAAGAGAGTGTGCAGTTTTCTGCATTCTCTCTGAAAATTGTTCGCGGTGATTAATTGGGGTTTTTCCCAGTATTTGAAGCTATATAAGTGTATTGAGTAATTTGCTAAATTATGATGAACATGAAGGGAATTTGGACCAAACAGACATTGATTAATCTCCTGTTAGGGCAATTTCTCTCCCTTTTGATTACTTCTACTGGGTTTTTATCATCCGAACTCGCTAGAAAAG : GAATCAATGCACCGACGTCCCAGTCTTTTCTTAATTACGTGCTCTTGGCATTATTTTATGGAGTTTTTATGATTTACAGGCAAGAAGGGATCAAG : GCAAAATGGTATTTTTACATCCTCCTTGGAATAGTTGATGTGGAGGCCAACTTTCTAG : TTGTGAAGGCTTACCAGTACACATCCTTAACAAGCGTGATGTTGCTGGATTGCTGGGCAATTCCGTGTGTTCTGCTTTTTACGTGGTTTTTCTTGAAGACAAAATACAGACCCAGAAAATTAGTTGGTGTTGCCATCTGTATTGCTGGTATTGTCCTGGTGATATTTTCAGATGTACATGCCGAAGATCGATCAA : GTGGTAGCAATCCTATCAAAGGGGATATACTTGTAATTGCTGGAGCCACATTATATGCCGTTAGTAATGTCAGTGAG : GAGTTTTTTGTCAAAAGTGCTGATATGGTTGAACTCATGGCATTTCTGGGCCTTTTTGGTGCCATTGTTAGTGGTTGCCAAAT : AGGCATACTTGAGCGCAATGAGTTGAAGTCCATTCACTGGTCAGCTGGAGCA : GCACTTCCCTTTGTTGGATTTGCATTGGCGATGTTTCTTTTCTACTCATTTGTTCCCATTTTGCTGAAG : AGGAGTGGTGCTACAATGCTAAATCTAGCCTTGCTTACCTCTGATATGTGGGCTGTTGTAATTCGTATCTTTGTATACCATCAGAAG : GTTGACTGGATATATTTTGTAGCTTTTGCTGCTGTTGCTGTGGGTCTTCTTATTTATTCTGG : GCGGGATAAGGTGGATAAGAACGTAGCTGATGAAGGCATTGTAAGAAGCAAGCGATTTGACGAGGAAACTGGCCTAGATAATCCTGCACGAAAAGATGCCATTGAGAGCTCAAGAACTGAAGAAAGTTTTGACGCCGAAACAGTGCCTGGAATATACGGAAGATAAATTTATTGTAGTTTTGAGACTTTCTTTTTTTTTTTTTATTTCTTCCTCTATCCCCTGTAGGAAAGGTCTTATTCCATTTGCGTTAATGTGATGTAGCTGCCAAACAGTCTCTGTCATTTTACTTAAATAAAACTTCAGTATCATTTTATCACTACACCTCA</gDNA_template>
            <first_frame> *  S  I  L  S  S  *  K  L  Y  Y  I  I  L  A  K  K  Y  *  F  L  F  *  R  T  K  R  V  C  S  F  L  H  S  L  *  K  L  F  A  V  I  N  W  G  F  S  Q  Y  L  K  L  Y  K  C  I  E  *  F  A  K  L  *  *  T  *  R  E  F  G  P  N  R  H  *  L  I  S  C  *  G  N  F  S  P  F  *  L  L  L  L  G  F  Y  H  P  N  S  L  E  K  :  E  S  M  H  R  R  P  S  L  F  L  I  T  C  S  W  H  Y  F  M  E  F  L  *  F  T  G  K  K  G  S  R :   Q  N  G  I  F  T  S  S  L  E  *  L  M  W  R  P  T  F  *  :  L  *  R  L  T  S  T  H  P  *  Q  A  *  C  C  W  I  A  G  Q  F  R  V  F  C  F  L  R  G  F  S  *  R  Q  N  T  D  P  E  N  *  L  V  L  P  S  V  L  L  V  L  S  W  *  Y  F  Q  M  Y  M  P  K  I  D  Q  :  V  V  A  I  L  S  K  G  I  Y  L  *  L  L  E  P  H  Y  M  P  L  V  M  S  V  R :   S  F  L  S  K  V  L  I  W  L  N  S  W  H  F  W  A  F  L  V  P  L  L  V  V  A  K   : *  A  Y  L  S  A  M  S  *  S  P  F  T  G  Q  L  E  Q :   H  F  P  L  L  D  L  H  W  R  C  F  F  S  T  H  L  F  P  F  C  *  R :   G  V  V  L  Q  C  *  I  *  P  C  L  P  L  I  C  G  L  L  *  F  V  S  L  Y  T  I  R  R :   L  T  G  Y  I  L  *  L  L  L  L  L  L  W  V  F  L  F  I  L   : G  G  I  R  W  I  R  T  *  L  M  K  A  L  *  E  A  S  D  L  T  R  K  L  A  *  I  I  L  H  E  K  M  P  L  R  A  Q  E  L  K  K  V  L  T  P  K  Q  C  L  E  Y  T  E  D  K  F  I  V  V  L  R  L  S  F  F  F  F  I  S  S  S  I  P  C  R  K  G  L  I  P  F  A  L  M  *  C  S  C  Q  T  V  S  V  I  L  L  K  *  N  F  S  I  I  L  S  L  H  L  </first_frame>
            <second_frame>  N  Q  F  Y  H  H  K  N  F  I  I  *  S  S  Q  K  N  I  N  F  Y  F  E  E  Q  R  E  C  A  V  F  C  I  L  S  E  N  C  S  R  *  L  I  G  V  F  P  S  I  *  S  Y  I  S  V  L  S  N  L  L  N  Y  D  E  H  E  G  N  L  D  Q  T  D  I  D  *  S  P  V  R  A  I  S  L  P  F  D  Y  F  Y  W  V  F  I  I  R  T  R  *  K  R :   N  Q  C  T  D  V  P  V  F  S  *  L  R  A  L  G  I  I  L  W  S  F  Y  D  L  Q  A  R  R  D  Q   : G  K  M  V  F  L  H  P  P  W  N  S  *  C  G  G  Q  L  S  S :   C  E  G  L  P  V  H  I  L  N  K  R  D  V  A  G  L  L  G  N  S  V  C  S  A  F  Y  V  V  F  L  E  D  K  I  Q  T  Q  K  I  S  W  C  C  H  L  Y  C  W  Y  C  P  G  D  I  F  R  C  T  C  R  R  S  I  K :   W  *  Q  S  Y  Q  R  G  Y  T  C  N  C  W  S  H  I  I  C  R  *  *  C  Q  *   : G  V  F  C  Q  K  C  *  Y  G  *  T  H  G  I  S  G  P  F  W  C  H  C  *  W  L  P  N  :  R  H  T  *  A  Q  *  V  E  V  H  S  L  V  S  W  S   : S  T  S  L  C  W  I  C  I  G  D  V  S  F  L  L  I  C  S  H  F  A  E   : E  E  W  C  Y  N  A  K  S  S  L  A  Y  L  *  Y  V  G  C  C  N  S  Y  L  C  I  P  S  E   : G  *  L  D  I  F  C  S  F  C  C  C  C  C  G  S  S  Y  L  F  W  :  A  G  *  G  G  *  E  R  S  *  *  R  H  C  K  K  Q  A  I  *  R  G  N  W  P  R  *  S  C  T  K  R  C  H  *  E  L  K  N  *  R  K  F  *  R  R  N  S  A  W  N  I  R  K  I  N  L  L  *  F  *  D  F  L  F  F  F  L  F  L  P  L  S  P  V  G  K  V  L  F  H  L  R  *  C  D  V  A  A  K  Q  S  L  S  F  Y  L  N  K  T  S  V  S  F  Y  H  Y  T  S </second_frame>
            <third_frame>   I  N  F  I  I  I  K  T  L  L  Y  N  P  R  K  K  I  L  I  F  I  L  K  N  K  E  S  V  Q  F  S  A  F  S  L  K  I  V  R  G  D  *  L  G  F  F  P  V  F  E  A  I  *  V  Y  *  V  I  C  *  I  M  M  N  M  K  G  I  W  T  K  Q  T  L  I  N  L  L  L  G  Q  F  L  S  L  L  I  T  S  T  G  F  L  S  S  E  L  A  R  K   : G  I  N  A  P  T  S  Q  S  F  L  N  Y  V  L  L  A  L  F  Y  G  V  F  M  I  Y  R  Q  E  G  I  K  :  A  K  W  Y  F  Y  I  L  L  G  I  V  D  V  E  A  N  F  L   : V  V  K  A  Y  Q  Y  T  S  L  T  S  V  M  L  L  D  C  W  A  I  P  C  V  L  L  F  T  W  F  F  L  K  T  K  Y  R  P  R  K  L  V  G  V  A  I  C  I  A  G  I  V  L  V  I  F  S  D  V  H  A  E  D  R  S   : S  G  S  N  P  I  K  G  D  I  L  V  I  A  G  A  T  L  Y  A  V  S  N  V  S  E  :  E  F  F  V  K  S  A  D  M  V  E  L  M  A  F  L  G  L  F  G  A  I  V  S  G  C  Q  I :   G  I  L  E  R  N  E  L  K  S  I  H  W  S  A  G  A  :  A  L  P  F  V  G  F  A  L  A  M  F  L  F  Y  S  F  V  P  I  L  L  K  :  R  S  G  A  T  M  L  N  L  A  L  L  T  S  D  M  W  A  V  V  I  R  I  F  V  Y  H  Q  K  :  V  D  W  I  Y  F  V  A  F  A  A  V  A  V  G  L  L  I  Y  S  G :   R  D  K  V  D  K  N  V  A  D  E  G  I  V  R  S  K  R  F  D  E  E  T  G  L  D  N  P  A  R  K  D  A  I  E  S  S  R  T  E  E  S  F  D  A  E  T  V  P  G  I  Y  G  R  *  I  Y  C  S  F  E  T  F  F  F  F  F  Y  F  F  L  Y  P  L  *  E  R  S  Y  S  I  C  V  N  V  M  *  L  P  N  S  L  C  H  F  T  *  I  K  L  Q  Y  H  F  I  T  T  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13310" stop="13430"/>
                    <exon start="14368" stop="14462"/>
                    <exon start="15339" stop="15396"/>
                    <exon start="15982" stop="16176"/>
                    <exon start="16463" stop="16539"/>
                    <exon start="17284" stop="17366"/>
                    <exon start="17531" stop="17582"/>
                    <exon start="18475" stop="18543"/>
                    <exon start="18787" stop="18873"/>
                    <exon start="18991" stop="19052"/>
                    <exon start="19890" stop="20055"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1062</number_coding_nucleotides>
                  <number_encoded_amino_acids>354</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IMMNMKGIWTKQTLINLLLGQFLSLLITSTGFLSSELARKGINAPTSQSFLNYVLLALFYGVFMIYRQEGIKAKWYFYILLGIVDVEANFLVVKAYQYTSLTSVMLLDCWAIPCVLLFTWFFLKTKYRPRKLVGVAICIAGIVLVIFSDVHAEDRSSGSNPIKGDILVIAGATLYAVSNVSEEFFVKSADMVELMAFLGLFGAIVSGCQIGILERNELKSIHWSAGAALPFVGFALAMFLFYSFVPILLKRSGATMLNLALLTSDMWAVVIRIFVYHQKVDWIYFVAFAAVAVGLLIYSGRDKVDKNVADEGIVRSKRFDEETGLDNPARKDAIESSRTEESFDAETVPGIYGR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="21037" PGL_stop="20333"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="21037" e_stop="20992"/>
            <exon e_start="20879" e_stop="20333"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.879" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="21037" e_stop="20992" e_length="46"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.879">
            <gDNA_intron_boundary i_start="20991" i_stop="20880" i_length="112"/>
          </intron>
          <exon e_serial="2" e_score="0.991">
            <gDNA_exon_boundary e_start="20879" e_stop="20333" e_length="547"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21037" stop="20992"/>
              <exon start="20879" stop="20333"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U331023" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTAAAGTTCTTGCTGAGCATCAATTGGCCCATCCTGATGAAGAAG : GTATGCCAATAAACAACCTGTACAGTACGTGCCGAGAACGGTTCTTGGTGAGCAGTCAAGTTACTTTGAATTCACATTTGACAGAATTTAAAGACCATGAGTTGATCAAAACCAAAAGAAATTCTGATGGTCAAGATTGCCTTTGTATTCCTCTCACAAATGAAGCCCTTCAGAAACTTATAGCAGATATCGTTTGATAGAGCTTCCAATACAAGAAGAGAAATCACTCAGCAGCAAATTTGAAGCAGCAGAGGCATGTTTAATTTAATGTATGACAAACTTCATGTATAAAAAAGTGCACATCTTTTCACTTGTGCATAGGAGTTGGCCTGATCCTCAGCTGGCTTTTACTCAACATGCTAGGATATCTATTAAATATGGTTAACTTATCAAGCATCTCACAGAGAGAGCAATATGACCGGAATGTATTCAGTTTGTGGCTTTGTTAGATCCTCATGTAATCTGCTTGGAATGTGTTGGTGTTTCTTAATGTATTTTAAGAAGATTACACAATTTAACTAATTAGTGATTATTATATTTCAGCTGT</gDNA_template>
            <first_frame> F  K  V  L  A  E  H  Q  L  A  H  P  D  E  E   : G  M  P  I  N  N  L  Y  S  T  C  R  E  R  F  L  V  S  S  Q  V  T  L  N  S  H  L  T  E  F  K  D  H  E  L  I  K  T  K  R  N  S  D  G  Q  D  C  L  C  I  P  L  T  N  E  A  L  Q  K  L  I  A  D  I  V  *  *  S  F  Q  Y  K  K  R  N  H  S  A  A  N  L  K  Q  Q  R  H  V  *  F  N  V  *  Q  T  S  C  I  K  K  C  T  S  F  H  L  C  I  G  V  G  L  I  L  S  W  L  L  L  N  M  L  G  Y  L  L  N  M  V  N  L  S  S  I  S  Q  R  E  Q  Y  D  R  N  V  F  S  L  W  L  C  *  I  L  M  *  S  A  W  N  V  L  V  F  L  N  V  F  *  E  D  Y  T  I  *  L  I  S  D  Y  Y  I  S  A   </first_frame>
            <second_frame>  L  K  F  L  L  S  I  N  W  P  I  L  M  K  K  :  V  C  Q  *  T  T  C  T  V  R  A  E  N  G  S  W  *  A  V  K  L  L  *  I  H  I  *  Q  N  L  K  T  M  S  *  S  K  P  K  E  I  L  M  V  K  I  A  F  V  F  L  S  Q  M  K  P  F  R  N  L  *  Q  I  S  F  D  R  A  S  N  T  R  R  E  I  T  Q  Q  Q  I  *  S  S  R  G  M  F  N  L  M  Y  D  K  L  H  V  *  K  S  A  H  L  F  T  C  A  *  E  L  A  *  S  S  A  G  F  Y  S  T  C  *  D  I  Y  *  I  W  L  T  Y  Q  A  S  H  R  E  S  N  M  T  G  M  Y  S  V  C  G  F  V  R  S  S  C  N  L  L  G  M  C  W  C  F  L  M  Y  F  K  K  I  T  Q  F  N  *  L  V  I  I  I  F  Q  L  </second_frame>
            <third_frame>   *  S  S  C  *  A  S  I  G  P  S  *  *  R  R :   Y  A  N  K  Q  P  V  Q  Y  V  P  R  T  V  L  G  E  Q  S  S  Y  F  E  F  T  F  D  R  I  *  R  P  *  V  D  Q  N  Q  K  K  F  *  W  S  R  L  P  L  Y  S  S  H  K  *  S  P  S  E  T  Y  S  R  Y  R  L  I  E  L  P  I  Q  E  E  K  S  L  S  S  K  F  E  A  A  E  A  C  L  I  *  C  M  T  N  F  M  Y  K  K  V  H  I  F  S  L  V  H  R  S  W  P  D  P  Q  L  A  F  T  Q  H  A  R  I  S  I  K  Y  G  *  L  I  K  H  L  T  E  R  A  I  *  P  E  C  I  Q  F  V  A  L  L  D  P  H  V  I  C  L  E  C  V  G  V  S  *  C  I  L  R  R  L  H  N  L  T  N  *  *  L  L  Y  F  S  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21037" stop="20992"/>
                    <exon start="20879" stop="20683"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FKVLAEHQLAHPDEEGMPINNLYSTCRERFLVSSQVTLNSHLTEFKDHELIKTKRNSDGQDCLCIPLTNEALQKLIADIV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="24073" PGL_stop="21162"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24073" e_stop="23784"/>
            <exon e_start="22943" e_stop="22837"/>
            <exon e_start="22698" e_stop="22566"/>
            <exon e_start="21841" e_stop="21547"/>
            <exon e_start="21219" e_stop="21162"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.654" acc_prob="0.861" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.717" acc_prob="0.797" e_score="0.980"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="24073" e_stop="23784" e_length="290"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="23783" i_stop="22944" i_length="840"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="22943" e_stop="22837" e_length="107"/>
          </exon>
          <intron i_serial="2" don_prob="0.654" acc_prob="0.861">
            <gDNA_intron_boundary i_start="22836" i_stop="22699" i_length="138"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="22698" e_stop="22566" e_length="133"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="22565" i_stop="21842" i_length="724"/>
          </intron>
          <exon e_serial="4" e_score="0.980">
            <gDNA_exon_boundary e_start="21841" e_stop="21547" e_length="295"/>
          </exon>
          <intron i_serial="4" don_prob="0.717" acc_prob="0.797">
            <gDNA_intron_boundary i_start="21546" i_stop="21220" i_length="327"/>
          </intron>
          <exon e_serial="5" e_score="0.983">
            <gDNA_exon_boundary e_start="21219" e_stop="21162" e_length="58"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24073" stop="23784"/>
              <exon start="22943" stop="22837"/>
              <exon start="22698" stop="22566"/>
              <exon start="21841" stop="21547"/>
              <exon start="21219" stop="21162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U323502" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAGCCCTAAGTTTCTTCCTAAGTCTCCGGCAGAGTCGCCGGGAAATAGACCGGAGAGAGCAGGGGGACGATGAGAGTATACAATTTTGGAGTCTAGAACTTGTGTCAACTTGTGCTTGTTAATTTACAGAGTCTTAATATTTCATATTTTTACTGAAATGGATGTAGACGAGATTGAGGAAGAGGAGTTTGGATTCTCGAGAAACTATTTCCTTGCTAAAGAATTGGGCTCTTCTTCAAGGAAAAAATCTGCTCGGAAGCTTTCAGAAATCGATCTCGTTGACGAAGAG : GAATTAAGAGAGGTGGCAGCTAGTATTGAGCCCAAACATGAGAAAGAAGTTAATGAGTTGATCAGTAGCTACCAAAGTTTATATTCAAAATGGCTTTTTGTGCTAAG : GAGCGGCTTTGCACTTTTGATGTATGGATTTGGATCAAAGAAAGCTTTGATTGAAGATTTTGCCTCAAAATCTTTGACTGAGTACTCTGTCATAGTCGTCAACGGGTATCTCCAATCTATAAATCTTAAACAG : GTGGTGATAACACTGGCTGAGCTCCTCTGGGATCAAGTAAAATTGCGACAAAAGACTACCTCAGGAAGTCTGTGTAAAAGCCAACAACCATTTAACACTAGATCCATGTCTGACCTTCTTACTTTTCTAGACAGTCCAGACCTAGAAGTCGAGGACTGTTTTGTTTGCATTCTTGTTCACAACATTGATGGTCCTGGATTACGTGATTCTGACAGCCAACAATGTGTTGCAAGCATTGCTGCTTGTTCTCATGTTCGTATGGTTGCTTCCATTGACCATGTCAACGCTCCTCTTT : TGTGGGACAAGAAGATGGTTCATACACAATTTGACTGGTACTGGTGCCATGTTCCTAC</gDNA_template>
            <first_frame> A  A  L  S  F  F  L  S  L  R  Q  S  R  R  E  I  D  R  R  E  Q  G  D  D  E  S  I  Q  F  W  S  L  E  L  V  S  T  C  A  C  *  F  T  E  S  *  Y  F  I  F  L  L  K  W  M  *  T  R  L  R  K  R  S  L  D  S  R  E  T  I  S  L  L  K  N  W  A  L  L  Q  G  K  N  L  L  G  S  F  Q  K  S  I  S  L  T  K  R :   N  *  E  R  W  Q  L  V  L  S  P  N  M  R  K  K  L  M  S  *  S  V  A  T  K  V  Y  I  Q  N  G  F  L  C  *   : G  A  A  L  H  F  *  C  M  D  L  D  Q  R  K  L  *  L  K  I  L  P  Q  N  L  *  L  S  T  L  S  *  S  S  T  G  I  S  N  L  *  I  L  N  R :   W  *  *  H  W  L  S  S  S  G  I  K  *  N  C  D  K  R  L  P  Q  E  V  C  V  K  A  N  N  H  L  T  L  D  P  C  L  T  F  L  L  F  *  T  V  Q  T  *  K  S  R  T  V  L  F  A  F  L  F  T  T  L  M  V  L  D  Y  V  I  L  T  A  N  N  V  L  Q  A  L  L  L  V  L  M  F  V  W  L  L  P  L  T  M  S  T  L  L  F  :  C  G  T  R  R  W  F  I  H  N  L  T  G  T  G  A  M  F  L  </first_frame>
            <second_frame>  Q  P  *  V  S  S  *  V  S  G  R  V  A  G  K  *  T  G  E  S  R  G  T  M  R  V  Y  N  F  G  V  *  N  L  C  Q  L  V  L  V  N  L  Q  S  L  N  I  S  Y  F  Y  *  N  G  C  R  R  D  *  G  R  G  V  W  I  L  E  K  L  F  P  C  *  R  I  G  L  F  F  K  E  K  I  C  S  E  A  F  R  N  R  S  R  *  R  R   : G  I  K  R  G  G  S  *  Y  *  A  Q  T  *  E  R  S  *  *  V  D  Q  *  L  P  K  F  I  F  K  M  A  F  C  A  K  :  E  R  L  C  T  F  D  V  W  I  W  I  K  E  S  F  D  *  R  F  C  L  K  I  F  D  *  V  L  C  H  S  R  Q  R  V  S  P  I  Y  K  S  *  T   : G  G  D  N  T  G  *  A  P  L  G  S  S  K  I  A  T  K  D  Y  L  R  K  S  V  *  K  P  T  T  I  *  H  *  I  H  V  *  P  S  Y  F  S  R  Q  S  R  P  R  S  R  G  L  F  C  L  H  S  C  S  Q  H  *  W  S  W  I  T  *  F  *  Q  P  T  M  C  C  K  H  C  C  L  F  S  C  S  Y  G  C  F  H  *  P  C  Q  R  S  S  F :   V  G  Q  E  D  G  S  Y  T  I  *  L  V  L  V  P  C  S  Y </second_frame>
            <third_frame>   S  P  K  F  L  P  K  S  P  A  E  S  P  G  N  R  P  E  R  A  G  G  R  *  E  Y  T  I  L  E  S  R  T  C  V  N  L  C  L  L  I  Y  R  V  L  I  F  H  I  F  T  E  M  D  V  D  E  I  E  E  E  E  F  G  F  S  R  N  Y  F  L  A  K  E  L  G  S  S  S  R  K  K  S  A  R  K  L  S  E  I  D  L  V  D  E  E  :  E  L  R  E  V  A  A  S  I  E  P  K  H  E  K  E  V  N  E  L  I  S  S  Y  Q  S  L  Y  S  K  W  L  F  V  L  R :   S  G  F  A  L  L  M  Y  G  F  G  S  K  K  A  L  I  E  D  F  A  S  K  S  L  T  E  Y  S  V  I  V  V  N  G  Y  L  Q  S  I  N  L  K  Q  :  V  V  I  T  L  A  E  L  L  W  D  Q  V  K  L  R  Q  K  T  T  S  G  S  L  C  K  S  Q  Q  P  F  N  T  R  S  M  S  D  L  L  T  F  L  D  S  P  D  L  E  V  E  D  C  F  V  C  I  L  V  H  N  I  D  G  P  G  L  R  D  S  D  S  Q  Q  C  V  A  S  I  A  A  C  S  H  V  R  M  V  A  S  I  D  H  V  N  A  P  L   : L  W  D  K  K  M  V  H  T  Q  F  D  W  Y  W  C  H  V  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23999" stop="23784"/>
                    <exon start="22943" stop="22837"/>
                    <exon start="22698" stop="22566"/>
                    <exon start="21841" stop="21547"/>
                    <exon start="21219" stop="21164"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>807</number_coding_nucleotides>
                  <number_encoded_amino_acids>269</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EYTILESRTCVNLCLLIYRVLIFHIFTEMDVDEIEEEEFGFSRNYFLAKELGSSSRKKSARKLSEIDLVDEEELREVAASIEPKHEKEVNELISSYQSLYSKWLFVLRSGFALLMYGFGSKKALIEDFASKSLTEYSVIVVNGYLQSINLKQVVITLAELLWDQVKLRQKTTSGSLCKSQQPFNTRSMSDLLTFLDSPDLEVEDCFVCILVHNIDGPGLRDSDSQQCVASIAACSHVRMVASIDHVNAPLLWDKKMVHTQFDWYWCHVP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="29969" PGL_stop="24479"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29969" e_stop="29953"/>
            <exon e_start="29855" e_stop="29757"/>
            <exon e_start="27765" e_stop="27609"/>
            <exon e_start="26455" e_stop="26346"/>
            <exon e_start="25851" e_stop="25702"/>
            <exon e_start="25290" e_stop="25195"/>
            <exon e_start="24773" e_stop="24479"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.813" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.636" e_score="1.000"/>
          <exon-intron don_prob="0.176" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.810" e_score="1.000"/>
          <exon-only e_score="0.942"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="29969" e_stop="29953" e_length="17"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="29952" i_stop="29856" i_length="97"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="29855" e_stop="29757" e_length="99"/>
          </exon>
          <intron i_serial="2" don_prob="0.813" acc_prob="0.992">
            <gDNA_intron_boundary i_start="29756" i_stop="27766" i_length="1991"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="27765" e_stop="27609" e_length="157"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="27608" i_stop="26456" i_length="1153"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="26455" e_stop="26346" e_length="110"/>
          </exon>
          <intron i_serial="4" don_prob="0.984" acc_prob="0.636">
            <gDNA_intron_boundary i_start="26345" i_stop="25852" i_length="494"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="25851" e_stop="25702" e_length="150"/>
          </exon>
          <intron i_serial="5" don_prob="0.176" acc_prob="0.993">
            <gDNA_intron_boundary i_start="25701" i_stop="25291" i_length="411"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="25290" e_stop="25195" e_length="96"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.810">
            <gDNA_intron_boundary i_start="25194" i_stop="24774" i_length="421"/>
          </intron>
          <exon e_serial="7" e_score="0.942">
            <gDNA_exon_boundary e_start="24773" e_stop="24479" e_length="295"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29969" stop="29953"/>
              <exon start="29855" stop="29757"/>
              <exon start="27765" stop="27609"/>
              <exon start="26455" stop="26346"/>
              <exon start="25851" stop="25702"/>
              <exon start="25290" stop="25195"/>
              <exon start="24773" stop="24479"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U329864" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGACGATTACTTCGAG : GGCGAAAGTTCTGAGATGTACGACTATCAAGTTGATTGGGGGATGCCAGATAGTTCTAGCCCGCTGCACCCAGTTTATTTTGCTAAGTGCTTGACTAAG : GCTGTTCACATGAAACATGCTAAGATGATGGATCATCCATCAAATGGCATTTCAATTTGGGGACGCCTCAAGCCTGCCTTTCTGGAAGAAGAATATTACGTGCGAAGGCTCTTCAGTGGCGATGAAGTTAGTGACGGCTCCACCTTGGATTGGAAAG : ATGGAGAAATTTTGAGCTTTAGTTCAAGATATGACAAGAGCCGCACTTTGTCTTCTATCTACAGATTGGAAATCATGAGAGTCGACCTATTTTCTGTGTATGGTGCTCAG : TTAGCAGTAAATTTGTATGACTTCCATGATGCTGAGCCTGACAGTCTTGTATACTCAGCTCCAGCAATTTTAGAGTGGTTTCGGCAGCAAGGAATAAGGTGCAAATATGCACTTAAAGCTCTTTGCAGAAAGAAAGGACTTCATGTTGAG : AGAGCAAATTTGATTGGAGTTGACAGTCTTGGCATGGATGTCAGAGTTCTCTCTGGAACAGAAGTGTGGACACATCGTTTCCCCTTCAAAGTTAGG : GCACATTCAGAGATTGCTGCTGAGAAACAGATCCGTCAGCTTCTTTTTCCCAGGTCTCGTCGTAAGAAGTTTAGGACTGCTGAAAGAAGTGGAGATTTGGACTCACTTTAAGTTTAATCTTACTGTTTAGAAGCAGATGTTATGAATAAACATATATTATCTATATATGTTACCAAATAATTGTATGCAGTTAGTTCTCAGTTTTGATTTTCTTTAATGTCGTGATGGATTTGAATTATATATAGTGATCAGTTGAACCCCTTTTGATTAGATATACAAAGATAAAAAGAGAATA</gDNA_template>
            <first_frame> L  T  I  T  S  R :   A  K  V  L  R  C  T  T  I  K  L  I  G  G  C  Q  I  V  L  A  R  C  T  Q  F  I  L  L  S  A  *  L  R :   L  F  T  *  N  M  L  R  *  W  I  I  H  Q  M  A  F  Q  F  G  D  A  S  S  L  P  F  W  K  K  N  I  T  C  E  G  S  S  V  A  M  K  L  V  T  A  P  P  W  I  G  K  :  M  E  K  F  *  A  L  V  Q  D  M  T  R  A  A  L  C  L  L  S  T  D  W  K  S  *  E  S  T  Y  F  L  C  M  V  L  S :   *  Q  *  I  C  M  T  S  M  M  L  S  L  T  V  L  Y  T  Q  L  Q  Q  F  *  S  G  F  G  S  K  E  *  G  A  N  M  H  L  K  L  F  A  E  R  K  D  F  M  L  R :   E  Q  I  *  L  E  L  T  V  L  A  W  M  S  E  F  S  L  E  Q  K  C  G  H  I  V  S  P  S  K  L  G :   H  I  Q  R  L  L  L  R  N  R  S  V  S  F  F  F  P  G  L  V  V  R  S  L  G  L  L  K  E  V  E  I  W  T  H  F  K  F  N  L  T  V  *  K  Q  M  L  *  I  N  I  Y  Y  L  Y  M  L  P  N  N  C  M  Q  L  V  L  S  F  D  F  L  *  C  R  D  G  F  E  L  Y  I  V  I  S  *  T  P  F  D  *  I  Y  K  D  K  K  R  I </first_frame>
            <second_frame>  *  R  L  L  R   : G  R  K  F  *  D  V  R  L  S  S  *  L  G  D  A  R  *  F  *  P  A  A  P  S  L  F  C  *  V  L  D  *   : G  C  S  H  E  T  C  *  D  D  G  S  S  I  K  W  H  F  N  L  G  T  P  Q  A  C  L  S  G  R  R  I  L  R  A  K  A  L  Q  W  R  *  S  *  *  R  L  H  L  G  L  E  R :   W  R  N  F  E  L  *  F  K  I  *  Q  E  P  H  F  V  F  Y  L  Q  I  G  N  H  E  S  R  P  I  F  C  V  W  C  S   : V  S  S  K  F  V  *  L  P  *  C  *  A  *  Q  S  C  I  L  S  S  S  N  F  R  V  V  S  A  A  R  N  K  V  Q  I  C  T  *  S  S  L  Q  K  E  R  T  S  C  *   : E  S  K  F  D  W  S  *  Q  S  W  H  G  C  Q  S  S  L  W  N  R  S  V  D  T  S  F  P  L  Q  S  *   : G  T  F  R  D  C  C  *  E  T  D  P  S  A  S  F  S  Q  V  S  S  *  E  V  *  D  C  *  K  K  W  R  F  G  L  T  L  S  L  I  L  L  F  R  S  R  C  Y  E  *  T  Y  I  I  Y  I  C  Y  Q  I  I  V  C  S  *  F  S  V  L  I  F  F  N  V  V  M  D  L  N  Y  I  *  *  S  V  E  P  L  L  I  R  Y  T  K  I  K  R  E   </second_frame>
            <third_frame>   D  D  Y  F  E  :  G  E  S  S  E  M  Y  D  Y  Q  V  D  W  G  M  P  D  S  S  S  P  L  H  P  V  Y  F  A  K  C  L  T  K  :  A  V  H  M  K  H  A  K  M  M  D  H  P  S  N  G  I  S  I  W  G  R  L  K  P  A  F  L  E  E  E  Y  Y  V  R  R  L  F  S  G  D  E  V  S  D  G  S  T  L  D  W  K   : D  G  E  I  L  S  F  S  S  R  Y  D  K  S  R  T  L  S  S  I  Y  R  L  E  I  M  R  V  D  L  F  S  V  Y  G  A  Q  :  L  A  V  N  L  Y  D  F  H  D  A  E  P  D  S  L  V  Y  S  A  P  A  I  L  E  W  F  R  Q  Q  G  I  R  C  K  Y  A  L  K  A  L  C  R  K  K  G  L  H  V  E  :  R  A  N  L  I  G  V  D  S  L  G  M  D  V  R  V  L  S  G  T  E  V  W  T  H  R  F  P  F  K  V  R  :  A  H  S  E  I  A  A  E  K  Q  I  R  Q  L  L  F  P  R  S  R  R  K  K  F  R  T  A  E  R  S  G  D  L  D  S  L  *  V  *  S  Y  C  L  E  A  D  V  M  N  K  H  I  L  S  I  Y  V  T  K  *  L  Y  A  V  S  S  Q  F  *  F  S  L  M  S  *  W  I  *  I  I  Y  S  D  Q  L  N  P  F  *  L  D  I  Q  R  *  K  E  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29967" stop="29953"/>
                    <exon start="29855" stop="29757"/>
                    <exon start="27765" stop="27609"/>
                    <exon start="26455" stop="26346"/>
                    <exon start="25851" stop="25702"/>
                    <exon start="25290" stop="25195"/>
                    <exon start="24773" stop="24663"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>735</number_coding_nucleotides>
                  <number_encoded_amino_acids>245</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DDYFEGESSEMYDYQVDWGMPDSSSPLHPVYFAKCLTKAVHMKHAKMMDHPSNGISIWGRLKPAFLEEEYYVRRLFSGDEVSDGSTLDWKDGEILSFSSRYDKSRTLSSIYRLEIMRVDLFSVYGAQLAVNLYDFHDAEPDSLVYSAPAILEWFRQQGIRCKYALKALCRKKGLHVERANLIGVDSLGMDVRVLSGTEVWTHRFPFKVRAHSEIAAEKQIRQLLFPRSRRKKFRTAERSGDLDSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="33912" PGL_stop="30002"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33912" e_stop="33809"/>
            <exon e_start="32649" e_stop="32526"/>
            <exon e_start="31574" e_stop="31343"/>
            <exon e_start="31209" e_stop="31107"/>
            <exon e_start="31010" e_stop="30946"/>
            <exon e_start="30072" e_stop="30002"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.741" acc_prob="0.799" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.829" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.983" e_score="1.000"/>
          <exon-only e_score="0.958"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="33912" e_stop="33809" e_length="104"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.994">
            <gDNA_intron_boundary i_start="33808" i_stop="32650" i_length="1159"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="32649" e_stop="32526" e_length="124"/>
          </exon>
          <intron i_serial="2" don_prob="0.741" acc_prob="0.799">
            <gDNA_intron_boundary i_start="32525" i_stop="31575" i_length="951"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="31574" e_stop="31343" e_length="232"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.990">
            <gDNA_intron_boundary i_start="31342" i_stop="31210" i_length="133"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="31209" e_stop="31107" e_length="103"/>
          </exon>
          <intron i_serial="4" don_prob="0.829" acc_prob="0.986">
            <gDNA_intron_boundary i_start="31106" i_stop="31011" i_length="96"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="31010" e_stop="30946" e_length="65"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.983">
            <gDNA_intron_boundary i_start="30945" i_stop="30073" i_length="873"/>
          </intron>
          <exon e_serial="6" e_score="0.958">
            <gDNA_exon_boundary e_start="30072" e_stop="30002" e_length="71"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33912" stop="33809"/>
              <exon start="32649" stop="32526"/>
              <exon start="31574" stop="31343"/>
              <exon start="31209" stop="31107"/>
              <exon start="31010" stop="30946"/>
              <exon start="30072" stop="30002"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U325089" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGACAAAAAGATCTTCGATTCAATTAACGTTTTCCTCAGTTTCATATCATTAATACTCTGTTTCTTGATGTTCATCTCCGCGCCTTCATCATCAATCTCCATCG : GTCCCTCGCAATGTTTCATATGTCATGCTGATGGAGGTAGTTGCTCAGCATCATTAGGAGCTGCAAGCAGTTGGATCAAGCCATCATACGAGGTTCAGATATTCTCTGACCATTCAGGTATAAG : TTTCAGGACTGAGAACCCTTTCTTTGGAGCTGCACAATCGCATTGGCTTGCTGTAGGACACGAGAGTAGCCTTTCAAGAATTTCAGTTGCAGCAGATTACCCAGATTCTGTTCCTGATTCCCCTAACTATGTCCGCAACAGTGGCTATCACCCTCTTGAAGGAATGCGAGACCAGAGACGAGTTCGTGATACTGAACTCACAGCTGCTGAAATAGCAAGGACAACTGTTGAG : GCTAATAACAATGCATTGTTGATATTCCCTGGCACGGTTCATTGTGAACCTCACGAACAAGTGTCATGGGCAGAATTTCAGTACGTGATTGATGAATATGGAG : ACATATTCTTTGAAATTTATGATGACAAGAATATCTTGCGGAATCGGGATGCAAGTAATTCCGTG : AATGCATTGATTGGAATGGAATTCTCCCAATACGAGAAGAGGAGGGTAGAATCACCTGATGACATCAATTT</gDNA_template>
            <first_frame> R  Q  K  D  L  R  F  N  *  R  F  P  Q  F  H  I  I  N  T  L  F  L  D  V  H  L  R  A  F  I  I  N  L  H  R :   S  L  A  M  F  H  M  S  C  *  W  R  *  L  L  S  I  I  R  S  C  K  Q  L  D  Q  A  I  I  R  G  S  D  I  L  *  P  F  R  Y  K  :  F  Q  D  *  E  P  F  L  W  S  C  T  I  A  L  A  C  C  R  T  R  E  *  P  F  K  N  F  S  C  S  R  L  P  R  F  C  S  *  F  P  *  L  C  P  Q  Q  W  L  S  P  S  *  R  N  A  R  P  E  T  S  S  *  Y  *  T  H  S  C  *  N  S  K  D  N  C  *   : G  *  *  Q  C  I  V  D  I  P  W  H  G  S  L  *  T  S  R  T  S  V  M  G  R  I  S  V  R  D  *  *  I  W  R :   H  I  L  *  N  L  *  *  Q  E  Y  L  A  E  S  G  C  K  *  F  R   : E  C  I  D  W  N  G  I  L  P  I  R  E  E  E  G  R  I  T  *  *  H  Q  F </first_frame>
            <second_frame>  D  K  K  I  F  D  S  I  N  V  F  L  S  F  I  S  L  I  L  C  F  L  M  F  I  S  A  P  S  S  S  I  S  I   : G  P  S  Q  C  F  I  C  H  A  D  G  G  S  C  S  A  S  L  G  A  A  S  S  W  I  K  P  S  Y  E  V  Q  I  F  S  D  H  S  G  I  S :   F  R  T  E  N  P  F  F  G  A  A  Q  S  H  W  L  A  V  G  H  E  S  S  L  S  R  I  S  V  A  A  D  Y  P  D  S  V  P  D  S  P  N  Y  V  R  N  S  G  Y  H  P  L  E  G  M  R  D  Q  R  R  V  R  D  T  E  L  T  A  A  E  I  A  R  T  T  V  E  :  A  N  N  N  A  L  L  I  F  P  G  T  V  H  C  E  P  H  E  Q  V  S  W  A  E  F  Q  Y  V  I  D  E  Y  G   : D  I  F  F  E  I  Y  D  D  K  N  I  L  R  N  R  D  A  S  N  S  V  :  N  A  L  I  G  M  E  F  S  Q  Y  E  K  R  R  V  E  S  P  D  D  I  N   </second_frame>
            <third_frame>   T  K  R  S  S  I  Q  L  T  F  S  S  V  S  Y  H  *  Y  S  V  S  *  C  S  S  P  R  L  H  H  Q  S  P  S  :  V  P  R  N  V  S  Y  V  M  L  M  E  V  V  A  Q  H  H  *  E  L  Q  A  V  G  S  S  H  H  T  R  F  R  Y  S  L  T  I  Q  V  *   : V  S  G  L  R  T  L  S  L  E  L  H  N  R  I  G  L  L  *  D  T  R  V  A  F  Q  E  F  Q  L  Q  Q  I  T  Q  I  L  F  L  I  P  L  T  M  S  A  T  V  A  I  T  L  L  K  E  C  E  T  R  D  E  F  V  I  L  N  S  Q  L  L  K  *  Q  G  Q  L  L  R :   L  I  T  M  H  C  *  Y  S  L  A  R  F  I  V  N  L  T  N  K  C  H  G  Q  N  F  S  T  *  L  M  N  M  E  :  T  Y  S  L  K  F  M  M  T  R  I  S  C  G  I  G  M  Q  V  I  P  * :   M  H  *  L  E  W  N  S  P  N  T  R  R  G  G  *  N  H  L  M  T  S  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33911" stop="33809"/>
                    <exon start="32649" stop="32526"/>
                    <exon start="31574" stop="31343"/>
                    <exon start="31209" stop="31107"/>
                    <exon start="31010" stop="30946"/>
                    <exon start="30072" stop="30004"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>696</number_coding_nucleotides>
                  <number_encoded_amino_acids>232</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DKKIFDSINVFLSFISLILCFLMFISAPSSSISIGPSQCFICHADGGSCSASLGAASSWIKPSYEVQIFSDHSGISFRTENPFFGAAQSHWLAVGHESSLSRISVAADYPDSVPDSPNYVRNSGYHPLEGMRDQRRVRDTELTAAEIARTTVEANNNALLIFPGTVHCEPHEQVSWAEFQYVIDEYGDIFFEIYDDKNILRNRDASNSVNALIGMEFSQYEKRRVESPDDIN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="33907" e_stop="33809"/>
            <exon e_start="32649" e_stop="32533"/>
            <exon e_start="31574" e_stop="31521"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.994" e_score="0.980"/>
          <exon-intron don_prob="0.887" acc_prob="0.799" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="33907" e_stop="33809" e_length="99"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.994">
            <gDNA_intron_boundary i_start="33808" i_stop="32650" i_length="1159"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="32649" e_stop="32533" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.887" acc_prob="0.799">
            <gDNA_intron_boundary i_start="32532" i_stop="31575" i_length="958"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="31574" e_stop="31521" e_length="54"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33907" stop="33809"/>
              <exon start="32649" stop="32533"/>
              <exon start="31574" stop="31521"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U338145" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAGATCTTCGATTCAATTAACGTTTTCCTCAGTTTCATATCATTAATACTCTGTTTCTTGATGTTCATCTCCGCGCCTTCATCATCAATCTCCATCG : GTCCCTCGCAATGTTTCATATGTCATGCTGATGGAGGTAGTTGCTCAGCATCATTAGGAGCTGCAAGCAGTTGGATCAAGCCATCATACGAGGTTCAGATATTCTCTGACCATTCAG : TTTCAGGACTGAGAACCCTTTCTTTGGAGCTGCACAATCGCATTGGCTTGCTGT</gDNA_template>
            <first_frame> K  R  S  S  I  Q  L  T  F  S  S  V  S  Y  H  *  Y  S  V  S  *  C  S  S  P  R  L  H  H  Q  S  P  S  :  V  P  R  N  V  S  Y  V  M  L  M  E  V  V  A  Q  H  H  *  E  L  Q  A  V  G  S  S  H  H  T  R  F  R  Y  S  L  T  I  Q  :  F  Q  D  *  E  P  F  L  W  S  C  T  I  A  L  A  C  C </first_frame>
            <second_frame>  K  D  L  R  F  N  *  R  F  P  Q  F  H  I  I  N  T  L  F  L  D  V  H  L  R  A  F  I  I  N  L  H  R :   S  L  A  M  F  H  M  S  C  *  W  R  *  L  L  S  I  I  R  S  C  K  Q  L  D  Q  A  I  I  R  G  S  D  I  L  *  P  F  S :   F  R  T  E  N  P  F  F  G  A  A  Q  S  H  W  L  A   </second_frame>
            <third_frame>   K  I  F  D  S  I  N  V  F  L  S  F  I  S  L  I  L  C  F  L  M  F  I  S  A  P  S  S  S  I  S  I   : G  P  S  Q  C  F  I  C  H  A  D  G  G  S  C  S  A  S  L  G  A  A  S  S  W  I  K  P  S  Y  E  V  Q  I  F  S  D  H  S   : V  S  G  L  R  T  L  S  L  E  L  H  N  R  I  G  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33905" stop="33809"/>
                    <exon start="32649" stop="32533"/>
                    <exon start="31574" stop="31522"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>267</number_coding_nucleotides>
                  <number_encoded_amino_acids>89</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KIFDSINVFLSFISLILCFLMFISAPSSSISIGPSQCFICHADGGSCSASLGAASSWIKPSYEVQIFSDHSVSGLRTLSLELHNRIGLL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="36475" PGL_stop="37249"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36475" e_stop="37249"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="36475" e_stop="37249" e_length="775"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36475" stop="37249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U343479" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCATAATCATCAGTATTAAGTCCATTAGAGTTTAGTTTTCTTGATGTTAATTGTGGGTTTAATCGATTCTTGATGCATTAGCTGTTAATGGTCATGCGGGGTTTTAGCTATTTGCAAAATCTGTGGCCTTTTTCTGTATTAAACCCCACTGATTTGAGAATTTCAGATGGGTTTGTGAGGAAATTAGGAATACCCGAAACTACCAAACAGTTCGTTTATGCAATTCAAGAACCTGAATCCAAGGCTGTTATATACGTATTGTGTGTGCAGAATTTATCTGAGCGATCTGCTCTAGATGCGGAGTGTTTGATTAGGGAAGTTAAGCCTGAGGCTGTAGTTGTCCAAGTGGGTAATTCTGGAGATGGTCATGAAAATGAGGGAATTGGGTTGAGTGATGGTGGTGATTTAGAGGAGGAGGAGGAGTCGGTACCAACTTCGTCGATTGAGGTTTTGAAGAGGTGTTTTGTGCATAAAACTAGTAAGGAGAAGTATGAGAATATGGCGGGGCGAGTTGTTTTGAGAGAGATATTTGGGGTTGGGTTTGATGGGCATTTCCCTGCTGCCAAGAAAGCAGCTGAAGAGGTTGGTTCGGCTTTCTTGTTGCTTGAGTCACCGTTTGTTCAATGCAGTTTGTCTGGTGAGCCTTCTGATGTGGGGGATGAGGGGTTCGAGAATAAGTTTGGAGTGTTTGGTTTGGAGGACGGGTATGAGAATAGGTTTGGAGTGTTTGGCTTAGAGGCTAGTAATAGTTTGGTTCCTCTAAGGACAGGGTTA</gDNA_template>
            <first_frame> S  I  I  I  S  I  K  S  I  R  V  *  F  S  *  C  *  L  W  V  *  S  I  L  D  A  L  A  V  N  G  H  A  G  F  *  L  F  A  K  S  V  A  F  F  C  I  K  P  H  *  F  E  N  F  R  W  V  C  E  E  I  R  N  T  R  N  Y  Q  T  V  R  L  C  N  S  R  T  *  I  Q  G  C  Y  I  R  I  V  C  A  E  F  I  *  A  I  C  S  R  C  G  V  F  D  *  G  S  *  A  *  G  C  S  C  P  S  G  *  F  W  R  W  S  *  K  *  G  N  W  V  E  *  W  W  *  F  R  G  G  G  G  V  G  T  N  F  V  D  *  G  F  E  E  V  F  C  A  *  N  *  *  G  E  V  *  E  Y  G  G  A  S  C  F  E  R  D  I  W  G  W  V  *  W  A  F  P  C  C  Q  E  S  S  *  R  G  W  F  G  F  L  V  A  *  V  T  V  C  S  M  Q  F  V  W  *  A  F  *  C  G  G  *  G  V  R  E  *  V  W  S  V  W  F  G  G  R  V  *  E  *  V  W  S  V  W  L  R  G  *  *  *  F  G  S  S  K  D  R  V  </first_frame>
            <second_frame>  P  *  S  S  V  L  S  P  L  E  F  S  F  L  D  V  N  C  G  F  N  R  F  L  M  H  *  L  L  M  V  M  R  G  F  S  Y  L  Q  N  L  W  P  F  S  V  L  N  P  T  D  L  R  I  S  D  G  F  V  R  K  L  G  I  P  E  T  T  K  Q  F  V  Y  A  I  Q  E  P  E  S  K  A  V  I  Y  V  L  C  V  Q  N  L  S  E  R  S  A  L  D  A  E  C  L  I  R  E  V  K  P  E  A  V  V  V  Q  V  G  N  S  G  D  G  H  E  N  E  G  I  G  L  S  D  G  G  D  L  E  E  E  E  E  S  V  P  T  S  S  I  E  V  L  K  R  C  F  V  H  K  T  S  K  E  K  Y  E  N  M  A  G  R  V  V  L  R  E  I  F  G  V  G  F  D  G  H  F  P  A  A  K  K  A  A  E  E  V  G  S  A  F  L  L  L  E  S  P  F  V  Q  C  S  L  S  G  E  P  S  D  V  G  D  E  G  F  E  N  K  F  G  V  F  G  L  E  D  G  Y  E  N  R  F  G  V  F  G  L  E  A  S  N  S  L  V  P  L  R  T  G  L </second_frame>
            <third_frame>   H  N  H  Q  Y  *  V  H  *  S  L  V  F  L  M  L  I  V  G  L  I  D  S  *  C  I  S  C  *  W  S  C  G  V  L  A  I  C  K  I  C  G  L  F  L  Y  *  T  P  L  I  *  E  F  Q  M  G  L  *  G  N  *  E  Y  P  K  L  P  N  S  S  F  M  Q  F  K  N  L  N  P  R  L  L  Y  T  Y  C  V  C  R  I  Y  L  S  D  L  L  *  M  R  S  V  *  L  G  K  L  S  L  R  L  *  L  S  K  W  V  I  L  E  M  V  M  K  M  R  E  L  G  *  V  M  V  V  I  *  R  R  R  R  S  R  Y  Q  L  R  R  L  R  F  *  R  G  V  L  C  I  K  L  V  R  R  S  M  R  I  W  R  G  E  L  F  *  E  R  Y  L  G  L  G  L  M  G  I  S  L  L  P  R  K  Q  L  K  R  L  V  R  L  S  C  C  L  S  H  R  L  F  N  A  V  C  L  V  S  L  L  M  W  G  M  R  G  S  R  I  S  L  E  C  L  V  W  R  T  G  M  R  I  G  L  E  C  L  A  *  R  L  V  I  V  W  F  L  *  G  Q  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36557" stop="37249"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>693</number_coding_nucleotides>
                  <number_encoded_amino_acids>231</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLMVMRGFSYLQNLWPFSVLNPTDLRISDGFVRKLGIPETTKQFVYAIQEPESKAVIYVLCVQNLSERSALDAECLIREVKPEAVVVQVGNSGDGHENEGIGLSDGGDLEEEEESVPTSSIEVLKRCFVHKTSKEKYENMAGRVVLREIFGVGFDGHFPAAKKAAEEVGSAFLLLESPFVQCSLSGEPSDVGDEGFENKFGVFGLEDGYENRFGVFGLEASNSLVPLRTGL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="37586" PGL_stop="38655"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="37586" e_stop="38655"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="37586" e_stop="38655" e_length="1070"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37586" stop="38655"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U329080" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATAGCTTTGAACAATGCTGGTCGGCTCCCACTTAGCAAAATGGGGAGTCATACAACTGAATTTTCTGAGCTTTGTATTGAGGACAAGTCCCACGCCCTTCTTGCACAGGCCCTCCGAAGCCAGACCGAGAAGTTCAAATCAATAGTTGCAGTAGTAGATGCCAGTGGCTTAGCTGGACTAAGGAAGCACTGGAGTGTTAATGTACCTGAGGAAGTTAAGGAAATTGTTGATCAGCTGGTCACTGACTCTGAAAACGATGGGGACAATTCAAGCCAAAGTGACAAAAAAGGGTTACTAGCTGTTAAGCCAGTGGTAGCTGTTGGGGCTGGTGCAACTGCAGTTCTGGGAGCTTCTTCATTTTCTAAAGTTGTTCCTGCATCTACAATATTGAAGGTTGTCACCTTCAAAGTCCCCGCTTCTCTAAAAATCATGATTACTCAAACCCAAAAGGCCCTTGCTCTTGCATTTGGAAAGTCAAACGTAGCAGGCCCTGCAATGGCAAGTTCTGGTGTCAAATCATCTGTCCTTAAGGCAACTGCTTCTGCAGAGAAAATCCGTGCCATGGCGCATGGCGTTATAGCCTCTGCAGAGAAAACTAGCATCTCAGCCATGAGAACGGCATTCTACGAAATCATGAGGAAACACCGAGTACGACCCGTTGGCTTTCTGCCATGGGCCACCTTTGGATGCAGTGTAGTTACTTGTGCGAGCTTGCTTGTGTATGGAGATGGAATAGAATGTGCTGCTGAATCTCTTCCAGCAGCTCCTTCAATCGCCAGTTTGGGTCGTGGAATCCAAAGTTTGCATCAAGCTTCCCTGGCAGTGAAACAAACAGAAAATTCCAGGATACAAAAGTCAATAGAGTCTCTTGTGTACAGATTTAAGAAGATAAGTATCTCATAAAGTGTTCAGTTCCTTTCTCAAGTACATGAGTCAATAGTTGAGCTCTAACTTTTTCATTCAAATAGATTTTAGCAAAGAGGTTGTGCAATTTCTGATACCTGGGATTTGTCTGTAGCATGGCAAGAAGTTCCAATAAAATGTGATTGGAGTTTGGATGATTTTTCAAC</gDNA_template>
            <first_frame> I  A  L  N  N  A  G  R  L  P  L  S  K  M  G  S  H  T  T  E  F  S  E  L  C  I  E  D  K  S  H  A  L  L  A  Q  A  L  R  S  Q  T  E  K  F  K  S  I  V  A  V  V  D  A  S  G  L  A  G  L  R  K  H  W  S  V  N  V  P  E  E  V  K  E  I  V  D  Q  L  V  T  D  S  E  N  D  G  D  N  S  S  Q  S  D  K  K  G  L  L  A  V  K  P  V  V  A  V  G  A  G  A  T  A  V  L  G  A  S  S  F  S  K  V  V  P  A  S  T  I  L  K  V  V  T  F  K  V  P  A  S  L  K  I  M  I  T  Q  T  Q  K  A  L  A  L  A  F  G  K  S  N  V  A  G  P  A  M  A  S  S  G  V  K  S  S  V  L  K  A  T  A  S  A  E  K  I  R  A  M  A  H  G  V  I  A  S  A  E  K  T  S  I  S  A  M  R  T  A  F  Y  E  I  M  R  K  H  R  V  R  P  V  G  F  L  P  W  A  T  F  G  C  S  V  V  T  C  A  S  L  L  V  Y  G  D  G  I  E  C  A  A  E  S  L  P  A  A  P  S  I  A  S  L  G  R  G  I  Q  S  L  H  Q  A  S  L  A  V  K  Q  T  E  N  S  R  I  Q  K  S  I  E  S  L  V  Y  R  F  K  K  I  S  I  S  *  S  V  Q  F  L  S  Q  V  H  E  S  I  V  E  L  *  L  F  H  S  N  R  F  *  Q  R  G  C  A  I  S  D  T  W  D  L  S  V  A  W  Q  E  V  P  I  K  C  D  W  S  L  D  D  F  S   </first_frame>
            <second_frame>  *  L  *  T  M  L  V  G  S  H  L  A  K  W  G  V  I  Q  L  N  F  L  S  F  V  L  R  T  S  P  T  P  F  L  H  R  P  S  E  A  R  P  R  S  S  N  Q  *  L  Q  *  *  M  P  V  A  *  L  D  *  G  S  T  G  V  L  M  Y  L  R  K  L  R  K  L  L  I  S  W  S  L  T  L  K  T  M  G  T  I  Q  A  K  V  T  K  K  G  Y  *  L  L  S  Q  W  *  L  L  G  L  V  Q  L  Q  F  W  E  L  L  H  F  L  K  L  F  L  H  L  Q  Y  *  R  L  S  P  S  K  S  P  L  L  *  K  S  *  L  L  K  P  K  R  P  L  L  L  H  L  E  S  Q  T  *  Q  A  L  Q  W  Q  V  L  V  S  N  H  L  S  L  R  Q  L  L  L  Q  R  K  S  V  P  W  R  M  A  L  *  P  L  Q  R  K  L  A  S  Q  P  *  E  R  H  S  T  K  S  *  G  N  T  E  Y  D  P  L  A  F  C  H  G  P  P  L  D  A  V  *  L  L  V  R  A  C  L  C  M  E  M  E  *  N  V  L  L  N  L  F  Q  Q  L  L  Q  S  P  V  W  V  V  E  S  K  V  C  I  K  L  P  W  Q  *  N  K  Q  K  I  P  G  Y  K  S  Q  *  S  L  L  C  T  D  L  R  R  *  V  S  H  K  V  F  S  S  F  L  K  Y  M  S  Q  *  L  S  S  N  F  F  I  Q  I  D  F  S  K  E  V  V  Q  F  L  I  P  G  I  C  L  *  H  G  K  K  F  Q  *  N  V  I  G  V  W  M  I  F  Q  </second_frame>
            <third_frame>   S  F  E  Q  C  W  S  A  P  T  *  Q  N  G  E  S  Y  N  *  I  F  *  A  L  Y  *  G  Q  V  P  R  P  S  C  T  G  P  P  K  P  D  R  E  V  Q  I  N  S  C  S  S  R  C  Q  W  L  S  W  T  K  E  A  L  E  C  *  C  T  *  G  S  *  G  N  C  *  S  A  G  H  *  L  *  K  R  W  G  Q  F  K  P  K  *  Q  K  R  V  T  S  C  *  A  S  G  S  C  W  G  W  C  N  C  S  S  G  S  F  F  I  F  *  S  C  S  C  I  Y  N  I  E  G  C  H  L  Q  S  P  R  F  S  K  N  H  D  Y  S  N  P  K  G  P  C  S  C  I  W  K  V  K  R  S  R  P  C  N  G  K  F  W  C  Q  I  I  C  P  *  G  N  C  F  C  R  E  N  P  C  H  G  A  W  R  Y  S  L  C  R  E  N  *  H  L  S  H  E  N  G  I  L  R  N  H  E  E  T  P  S  T  T  R  W  L  S  A  M  G  H  L  W  M  Q  C  S  Y  L  C  E  L  A  C  V  W  R  W  N  R  M  C  C  *  I  S  S  S  S  S  F  N  R  Q  F  G  S  W  N  P  K  F  A  S  S  F  P  G  S  E  T  N  R  K  F  Q  D  T  K  V  N  R  V  S  C  V  Q  I  *  E  D  K  Y  L  I  K  C  S  V  P  F  S  S  T  *  V  N  S  *  A  L  T  F  S  F  K  *  I  L  A  K  R  L  C  N  F  *  Y  L  G  F  V  C  S  M  A  R  S  S  N  K  M  *  L  E  F  G  *  F  F  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37586" stop="38488"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>900</number_coding_nucleotides>
                  <number_encoded_amino_acids>300</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IALNNAGRLPLSKMGSHTTEFSELCIEDKSHALLAQALRSQTEKFKSIVAVVDASGLAGLRKHWSVNVPEEVKEIVDQLVTDSENDGDNSSQSDKKGLLAVKPVVAVGAGATAVLGASSFSKVVPASTILKVVTFKVPASLKIMITQTQKALALAFGKSNVAGPAMASSGVKSSVLKATASAEKIRAMAHGVIASAEKTSISAMRTAFYEIMRKHRVRPVGFLPWATFGCSVVTCASLLVYGDGIECAAESLPAAPSIASLGRGIQSLHQASLAVKQTENSRIQKSIESLVYRFKKISIS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="47990" PGL_stop="54818"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47990" e_stop="48305"/>
            <exon e_start="49414" e_stop="49593"/>
            <exon e_start="49968" e_stop="50074"/>
            <exon e_start="51306" e_stop="51511"/>
            <exon e_start="52106" e_stop="52245"/>
            <exon e_start="52876" e_stop="53293"/>
            <exon e_start="54757" e_stop="54818"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.739" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.945" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.548"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="47990" e_stop="48305" e_length="316"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="48306" i_stop="49413" i_length="1108"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="49414" e_stop="49593" e_length="180"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.994">
            <gDNA_intron_boundary i_start="49594" i_stop="49967" i_length="374"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="49968" e_stop="50074" e_length="107"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.997">
            <gDNA_intron_boundary i_start="50075" i_stop="51305" i_length="1231"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="51306" e_stop="51511" e_length="206"/>
          </exon>
          <intron i_serial="4" don_prob="0.739" acc_prob="0.976">
            <gDNA_intron_boundary i_start="51512" i_stop="52105" i_length="594"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="52106" e_stop="52245" e_length="140"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.945">
            <gDNA_intron_boundary i_start="52246" i_stop="52875" i_length="630"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="52876" e_stop="53293" e_length="418"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="53294" i_stop="54756" i_length="1463"/>
          </intron>
          <exon e_serial="7" e_score="0.548">
            <gDNA_exon_boundary e_start="54757" e_stop="54818" e_length="62"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47990" stop="48305"/>
              <exon start="49414" stop="49593"/>
              <exon start="49968" stop="50074"/>
              <exon start="51306" stop="51511"/>
              <exon start="52106" stop="52245"/>
              <exon start="52876" stop="53293"/>
              <exon start="54757" stop="54818"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U319629" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAGAAAAAAGGCAAGCAAATAGCAATTGAAAGCTGCTCTGTTTTGCTTCACCTATCTGCTTCTGCAAATCCGGCCATTTCTGTGTATATATATAGATAGAAGGTGAAAAGGATGATGTGGGTTCGATCGATTCGGCGGCCATTATCGTCGTTGGTTCTACTTCAGTCGCGTGCCCCGAATTATTCCTCATTGTCAGCTTCAGCAGCTGCAGTAGAAGCGGAACGATGTATAAAGGAAGGACCCAGAAATAACTGGACTAGAGATGAAATCAAGTCTATTTACGATTCACCACTCCTCGATCTCCTCTTTCATGGC : GCTCAAGTACATAGACATTCTCATAACTTTAGAGAAGTACAGCAGTGCACTTTGCTGTCTATTAAGACAGGGGGATGCAGTGAAGATTGTTCGTATTGTCCTCAATCGTCTAGGTACAACACAGGACTGAAAGCACAGAAACTTATGAATAAGGATGCAGTCTTGGAAGCAGCAAGAAAG : GCAAAAGAGGGAGGTAGCACTCGTTTTTGTATGGGTGCTGCATGGAGGGATACAATAGGAAGGAAAACCAATATGAACCAGATCGTCGAGTATGTGAAGGAAATAAG : GGACATGGGAATGGAGGTTTGCTGCACCTTGGGAATGCTTGAGAAGCAGCAAGCTTTAGAGCTCAAGAAAGCTGGTCTAACAGCATACAATCACAATCTTGACACCTCAAGAGAATACTATCCTAATATTATAACCACTAGAACTTATGATGAGCGGCTGGAAACTCTTAAGCATGTACGCGAAGCAGGAATTAATGTGTGTTCAG : GTGGAATAATAGGGCTCGGTGAGGCTGAAGAGGATAGAATTGGTTTGTTGCATACCCTGTCAACTCTTCCAACTCACCCTGAGAGTGTGCCGATTAATGCACTTATTGCAGTAAAAGGTACACCATTGGAAGACCAGAAG : CCAGTGGACATATGGGATATGATTAGGATGATTTCGACAGCAAGAATAACAATGCCAGGTGCAATGGTTAGGCTTTCTGCAGGAAGAGTTCGTTTTTCTGTCCCCGAGCAGGCTCTTTGTTTCCTTGCTGGTGCCAATTCCATCTTTACAGGTGAGAAGTTGTTGACTACACCAAATAATGACTATGATGCTGATCAGAATATGTTCAAATTACTTGGACTTGTTCCTAAAGCTCCAAATTTCTCTGAGGATGAAAAAGATTCTGAAGACGAAAAGATGGAAGCATCTGTTTAGACTTTAGTTTAGTTCATTCTGTAATGATCAACCAGAGATCTATCTTTTTACTTAAATGTATGACTCTCCTCTTGAAATTTTACCATGATTCTAAGCTTTTTAATGTACCTACCATGTTTTCATT : AAAAAAATATTATAAAAGAAAAAAGAACTACATAATAAATAATAAAGATTTATAAAGTGAAT</gDNA_template>
            <first_frame> *  E  K  R  Q  A  N  S  N  *  K  L  L  C  F  A  S  P  I  C  F  C  K  S  G  H  F  C  V  Y  I  *  I  E  G  E  K  D  D  V  G  S  I  D  S  A  A  I  I  V  V  G  S  T  S  V  A  C  P  E  L  F  L  I  V  S  F  S  S  C  S  R  S  G  T  M  Y  K  G  R  T  Q  K  *  L  D  *  R  *  N  Q  V  Y  L  R  F  T  T  P  R  S  P  L  S  W   : R  S  S  T  *  T  F  S  *  L  *  R  S  T  A  V  H  F  A  V  Y  *  D  R  G  M  Q  *  R  L  F  V  L  S  S  I  V  *  V  Q  H  R  T  E  S  T  E  T  Y  E  *  G  C  S  L  G  S  S  K  K   : G  K  R  G  R  *  H  S  F  L  Y  G  C  C  M  E  G  Y  N  R  K  E  N  Q  Y  E  P  D  R  R  V  C  E  G  N  K  :  G  H  G  N  G  G  L  L  H  L  G  N  A  *  E  A  A  S  F  R  A  Q  E  S  W  S  N  S  I  Q  S  Q  S  *  H  L  K  R  I  L  S  *  Y  Y  N  H  *  N  L  *  *  A  A  G  N  S  *  A  C  T  R  S  R  N  *  C  V  F  R :   W  N  N  R  A  R  *  G  *  R  G  *  N  W  F  V  A  Y  P  V  N  S  S  N  S  P  *  E  C  A  D  *  C  T  Y  C  S  K  R  Y  T  I  G  R  P  E   : A  S  G  H  M  G  Y  D  *  D  D  F  D  S  K  N  N  N  A  R  C  N  G  *  A  F  C  R  K  S  S  F  F  C  P  R  A  G  S  L  F  P  C  W  C  Q  F  H  L  Y  R  *  E  V  V  D  Y  T  K  *  *  L  *  C  *  S  E  Y  V  Q  I  T  W  T  C  S  *  S  S  K  F  L  *  G  *  K  R  F  *  R  R  K  D  G  S  I  C  L  D  F  S  L  V  H  S  V  M  I  N  Q  R  S  I  F  L  L  K  C  M  T  L  L  L  K  F  Y  H  D  S  K  L  F  N  V  P  T  M  F  S  L :   K  K  Y  Y  K  R  K  K  N  Y  I  I  N  N  K  D  L  *  S  E  </first_frame>
            <second_frame>  E  K  K  G  K  Q  I  A  I  E  S  C  S  V  L  L  H  L  S  A  S  A  N  P  A  I  S  V  Y  I  Y  R  *  K  V  K  R  M  M  W  V  R  S  I  R  R  P  L  S  S  L  V  L  L  Q  S  R  A  P  N  Y  S  S  L  S  A  S  A  A  A  V  E  A  E  R  C  I  K  E  G  P  R  N  N  W  T  R  D  E  I  K  S  I  Y  D  S  P  L  L  D  L  L  F  H  G  :  A  Q  V  H  R  H  S  H  N  F  R  E  V  Q  Q  C  T  L  L  S  I  K  T  G  G  C  S  E  D  C  S  Y  C  P  Q  S  S  R  Y  N  T  G  L  K  A  Q  K  L  M  N  K  D  A  V  L  E  A  A  R  K  :  A  K  E  G  G  S  T  R  F  C  M  G  A  A  W  R  D  T  I  G  R  K  T  N  M  N  Q  I  V  E  Y  V  K  E  I  R :   D  M  G  M  E  V  C  C  T  L  G  M  L  E  K  Q  Q  A  L  E  L  K  K  A  G  L  T  A  Y  N  H  N  L  D  T  S  R  E  Y  Y  P  N  I  I  T  T  R  T  Y  D  E  R  L  E  T  L  K  H  V  R  E  A  G  I  N  V  C  S   : G  G  I  I  G  L  G  E  A  E  E  D  R  I  G  L  L  H  T  L  S  T  L  P  T  H  P  E  S  V  P  I  N  A  L  I  A  V  K  G  T  P  L  E  D  Q  K  :  P  V  D  I  W  D  M  I  R  M  I  S  T  A  R  I  T  M  P  G  A  M  V  R  L  S  A  G  R  V  R  F  S  V  P  E  Q  A  L  C  F  L  A  G  A  N  S  I  F  T  G  E  K  L  L  T  T  P  N  N  D  Y  D  A  D  Q  N  M  F  K  L  L  G  L  V  P  K  A  P  N  F  S  E  D  E  K  D  S  E  D  E  K  M  E  A  S  V  *  T  L  V  *  F  I  L  *  *  S  T  R  D  L  S  F  Y  L  N  V  *  L  S  S  *  N  F  T  M  I  L  S  F  L  M  Y  L  P  C  F  H   : *  K  N  I  I  K  E  K  R  T  T  *  *  I  I  K  I  Y  K  V  N </second_frame>
            <third_frame>   R  K  K  A  S  K  *  Q  L  K  A  A  L  F  C  F  T  Y  L  L  L  Q  I  R  P  F  L  C  I  Y  I  D  R  R  *  K  G  *  C  G  F  D  R  F  G  G  H  Y  R  R  W  F  Y  F  S  R  V  P  R  I  I  P  H  C  Q  L  Q  Q  L  Q  *  K  R  N  D  V  *  R  K  D  P  E  I  T  G  L  E  M  K  S  S  L  F  T  I  H  H  S  S  I  S  S  F  M  A :   L  K  Y  I  D  I  L  I  T  L  E  K  Y  S  S  A  L  C  C  L  L  R  Q  G  D  A  V  K  I  V  R  I  V  L  N  R  L  G  T  T  Q  D  *  K  H  R  N  L  *  I  R  M  Q  S  W  K  Q  Q  E  R :   Q  K  R  E  V  A  L  V  F  V  W  V  L  H  G  G  I  Q  *  E  G  K  P  I  *  T  R  S  S  S  M  *  R  K  *   : G  T  W  E  W  R  F  A  A  P  W  E  C  L  R  S  S  K  L  *  S  S  R  K  L  V  *  Q  H  T  I  T  I  L  T  P  Q  E  N  T  I  L  I  L  *  P  L  E  L  M  M  S  G  W  K  L  L  S  M  Y  A  K  Q  E  L  M  C  V  Q  :  V  E  *  *  G  S  V  R  L  K  R  I  E  L  V  C  C  I  P  C  Q  L  F  Q  L  T  L  R  V  C  R  L  M  H  L  L  Q  *  K  V  H  H  W  K  T  R  S :   Q  W  T  Y  G  I  *  L  G  *  F  R  Q  Q  E  *  Q  C  Q  V  Q  W  L  G  F  L  Q  E  E  F  V  F  L  S  P  S  R  L  F  V  S  L  L  V  P  I  P  S  L  Q  V  R  S  C  *  L  H  Q  I  M  T  M  M  L  I  R  I  C  S  N  Y  L  D  L  F  L  K  L  Q  I  S  L  R  M  K  K  I  L  K  T  K  R  W  K  H  L  F  R  L  *  F  S  S  F  C  N  D  Q  P  E  I  Y  L  F  T  *  M  Y  D  S  P  L  E  I  L  P  *  F  *  A  F  *  C  T  Y  H  V  F  I  :  K  K  I  L  *  K  K  K  E  L  H  N  K  *  *  R  F  I  K  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48090" stop="48305"/>
                    <exon start="49414" stop="49593"/>
                    <exon start="49968" stop="50074"/>
                    <exon start="51306" stop="51511"/>
                    <exon start="52106" stop="52245"/>
                    <exon start="52876" stop="53169"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1140</number_coding_nucleotides>
                  <number_encoded_amino_acids>380</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KVKRMMWVRSIRRPLSSLVLLQSRAPNYSSLSASAAAVEAERCIKEGPRNNWTRDEIKSIYDSPLLDLLFHGAQVHRHSHNFREVQQCTLLSIKTGGCSEDCSYCPQSSRYNTGLKAQKLMNKDAVLEAARKAKEGGSTRFCMGAAWRDTIGRKTNMNQIVEYVKEIRDMGMEVCCTLGMLEKQQALELKKAGLTAYNHNLDTSREYYPNIITTRTYDERLETLKHVREAGINVCSGGIIGLGEAEEDRIGLLHTLSTLPTHPESVPINALIAVKGTPLEDQKPVDIWDMIRMISTARITMPGAMVRLSAGRVRFSVPEQALCFLAGANSIFTGEKLLTTPNNDYDADQNMFKLLGLVPKAPNFSEDEKDSEDEKMEASV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53142" stop="53293"/>
                    <exon start="54757" stop="54811"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RRKDGSICLDFSLVHSVMINQRSIFLLKCMTLLLKFYHDSKLFNVPTMFSLKKYYKRKKNYIINNKDL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="55418" PGL_stop="59480"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="55418" e_stop="55700"/>
            <exon e_start="56825" e_stop="56901"/>
            <exon e_start="57675" e_stop="57736"/>
            <exon e_start="57835" e_stop="57953"/>
            <exon e_start="58738" e_stop="58905"/>
            <exon e_start="59145" e_stop="59480"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.942" e_score="0.993"/>
          <exon-intron don_prob="0.996" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.764" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="55418" e_stop="55700" e_length="283"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.942">
            <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="56825" e_stop="56901" e_length="77"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.991">
            <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="57675" e_stop="57736" e_length="62"/>
          </exon>
          <intron i_serial="3" don_prob="0.764" acc_prob="0.000">
            <gDNA_intron_boundary i_start="57737" i_stop="57834" i_length="98"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="57835" e_stop="57953" e_length="119"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.997">
            <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="58738" e_stop="58905" e_length="168"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239"/>
          </intron>
          <exon e_serial="6" e_score="0.985">
            <gDNA_exon_boundary e_start="59145" e_stop="59480" e_length="336"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55418" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59480"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U316341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55615" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57835" stop="57865"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335615" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGAAGAACAACAACTACCAAAATTAAGAGCACATTTTCCTAATTAAAGTAATAAATTTCGCTTTCATTGCCAAATATCTTGTTTGATTTTGATTACCCCATTTAATTAATTTTTTTTTTGACTTATATATGCATAGGTTAGATAGAATAAGAAGATGCTGAGTTTCACCAATTTAGCTGCTCTTTTCTTTCTTGTTCTTGCTTTGTTCTTGTTCTATAGATACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAG : GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATG : TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG : GTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG : ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG : AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAGGATGTCTTGCGTAGGTAAACTGATTA</gDNA_template>
            <first_frame> G  R  T  T  T  T  K  I  K  S  T  F  S  *  L  K  *  *  I  S  L  S  L  P  N  I  L  F  D  F  D  Y  P  I  *  L  I  F  F  L  T  Y  I  C  I  G  *  I  E  *  E  D  A  E  F  H  Q  F  S  C  S  F  L  S  C  S  C  F  V  L  V  L  *  I  P  I  F  F  S  Y  G  *  R  I  T  K  I  Y  L  *  F  H  C  E   : G  Y  T  G  K  *  G  T  F  E  Q  L  *  G  K  G  S  P  Y  C  Q  C  C  I  K  M  :  W  F  N  R  F  K  L  Q  G  A  E  Y  F  V  *  E  V  Q  R  S  R :   F  *  N  F  S  I  S  L  *  P  V  P  V  A  R  T  R  N  K  *  G  D  S  A  N  C  M  H  Q  V  Q  S  *  I  P  C  I  *  K   : D  *  C  E  R  G  *  C  C  T  T  L  Q  V  L  E  I  R  K  R  R  F  P  W  K  C  C  Q  V  E  L  H  Q  I  P  C  G  Q  R  R  K  G  C  G  T  I  C  T  Q  D  T  T  S  S  V  *   : E  R  H  K  K  S  V  G  C  G  L  S  T  T  G  V  K  V  Q  H  M  Y  *  P  S  V  G  S  A  F  M  V  L  S  F  S  F  F  P  A  Y  E  T  S  E  L  V  P  H  P  L  S  F  S  L  L  M  Y  F  G  C  V  N  S  F  I  A  M  N  L  *  *  K  L  H  S  S  C  F  N  D  S  G  L  *  L  L  D  I  Q  V  C  Y  R  L  N  N  K  K  *  V  V  C  R  M  S  C  V  G  K  L  I  </first_frame>
            <second_frame>  E  E  Q  Q  L  P  K  L  R  A  H  F  P  N  *  S  N  K  F  R  F  H  C  Q  I  S  C  L  I  L  I  T  P  F  N  *  F  F  F  *  L  I  Y  A  *  V  R  *  N  K  K  M  L  S  F  T  N  L  A  A  L  F  F  L  V  L  A  L  F  L  F  Y  R  Y  P  S  F  S  L  M  A  E  G  S  P  K  S  I  Y  D  F  T  V  K  :  D  I  Q  G  N  E  V  P  L  S  N  Y  R  G  K  V  L  L  I  V  N  V  A  S  K  C :   G  L  T  D  S  N  Y  K  E  L  N  I  L  Y  E  K  Y  K  D  Q   : G  F  E  I  L  A  F  P  C  N  Q  F  L  W  Q  E  P  G  T  N  E  E  I  Q  Q  T  V  C  T  R  F  K  A  E  F  P  V  F  E  K  :  I  D  V  N  G  D  N  A  A  P  L  Y  K  F  L  K  S  E  K  G  G  F  L  G  S  A  V  K  W  N  F  T  K  F  L  V  D  K  E  G  K  V  V  E  R  Y  A  P  K  T  P  P  L  Q  F  E  :  K  D  I  K  N  L  L  G  V  A  *  A  L  Q  V  *  K  F  S  I  C  I  D  L  Q  L  E  V  L  S  W  F  Y  L  F  P  S  S  L  P  T  K  Q  A  S  L  Y  P  T  P  L  V  F  P  C  *  C  T  L  V  V  *  T  R  S  L  P  *  I  C  N  K  S  C  I  V  V  V  L  M  T  R  D  C  S  C  S  I  Y  K  Y  V  I  A  L  I  I  R  N  K  L  C  A  G  C  L  A  *  V  N  *  L </second_frame>
            <third_frame>   K  N  N  N  Y  Q  N  *  E  H  I  F  L  I  K  V  I  N  F  A  F  I  A  K  Y  L  V  *  F  *  L  P  H  L  I  N  F  F  F  D  L  Y  M  H  R  L  D  R  I  R  R  C  *  V  S  P  I  *  L  L  F  S  F  L  F  L  L  C  S  C  S  I  D  T  H  L  F  L  L  W  L  K  D  H  Q  N  L  F  M  I  S  L  *  R :   I  Y  R  E  M  R  Y  L  *  A  I  I  G  E  R  F  S  L  L  S  M  L  H  Q  N   : V  V  *  Q  I  Q  T  T  R  S  *  I  F  C  M  R  S  T  K  I  K  :  V  L  K  F  *  H  F  L  V  T  S  S  C  G  K  N  P  E  Q  M  R  R  F  S  K  L  Y  A  P  G  S  K  L  N  S  L  Y  L  K  R :   L  M  *  T  G  I  M  L  H  H  F  T  S  S  *  N  Q  K  K  A  V  S  L  E  V  L  S  S  G  T  S  P  N  S  L  W  T  K  K  E  R  L  W  N  D  M  H  P  R  H  H  L  F  S  L  R :   K  T  *  K  I  C  W  V  W  L  E  H  Y  R  C  E  S  S  A  Y  V  L  T  F  S  W  K  C  F  H  G  S  I  F  F  L  L  P  C  L  R  N  K  R  A  C  T  P  P  P  *  F  F  L  V  D  V  L  W  L  C  K  L  V  H  C  H  E  F  V  I  K  V  A  *  *  L  F  *  *  L  G  T  V  V  A  R  Y  T  S  M  L  S  P  *  *  *  E  I  S  C  V  Q  D  V  L  R  R  *  T  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55563" stop="55700"/>
                    <exon start="56825" stop="56901"/>
                    <exon start="57675" stop="57736"/>
                    <exon start="57835" stop="57953"/>
                    <exon start="58738" stop="58905"/>
                    <exon start="59145" stop="59177"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>594</number_coding_nucleotides>
                  <number_encoded_amino_acids>198</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKKMLSFTNLAALFFLVLALFLFYRYPSFSLMAEGSPKSIYDFTVKDIQGNEVPLSNYRGKVLLIVNVASKCGLTDSNYKELNILYEKYKDQGFEILAFPCNQFLWQEPGTNEEIQQTVCTRFKAEFPVFEKIDVNGDNAAPLYKFLKSEKGGFLGSAVKWNFTKFLVDKEGKVVERYAPKTPPLQFEKDIKNLLGVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="56793" e_stop="57405"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="56793" e_stop="57405" e_length="613"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56793" stop="57405"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U316340" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTTAAGCTTGCTAACGAGATTGAAAATGCAGGATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATGGTAAGTGAAGTAATCTAGTTTCTGTCTTGGCTTTTTCCTTGGTTTTCATTTAGAAGTGTCTCCACTGCTTCACTAATTAGACTTATGAGTTATATAAGTGTGACTAAGGTCTAGTTACTTCTGGAGAGTGTATACTATGTCAAATATTGTGCTACTGGGTGCATTTAAGTTTTATTGTACAATGATGATGTCAATTGCCACAAACTAGATGTACTCGTTTAGGGATGAATTTCTGTTATTCTGATTAGTATGTCTTTGCATGTTTTTGGTAGATGGAAAATTCCTTAAAAGGTTTCTTTTTATTTTAATTTACGACACGTTGATCCTCCTGCATTATTTTCTGGGATTCCCTGACTAAAGAAGTTGCTAGCAGGTTCTTTGAACTTACTTAACTTATAATTATTTATTTTTGCAAAGAATGCAATAACGAAAATTTGAGATTAGTGTTCACATAGTTTTGAACTGTCTTAGATGTTGATGTTGATTGATGATGATATATTATAA</gDNA_template>
            <first_frame> I  *  A  C  *  R  D  *  K  C  R  I  Y  R  E  M  R  Y  L  *  A  I  I  G  E  R  F  S  L  L  S  M  L  H  Q  N  G  K  *  S  N  L  V  S  V  L  A  F  S  L  V  F  I  *  K  C  L  H  C  F  T  N  *  T  Y  E  L  Y  K  C  D  *  G  L  V  T  S  G  E  C  I  L  C  Q  I  L  C  Y  W  V  H  L  S  F  I  V  Q  *  *  C  Q  L  P  Q  T  R  C  T  R  L  G  M  N  F  C  Y  S  D  *  Y  V  F  A  C  F  W  *  M  E  N  S  L  K  G  F  F  L  F  *  F  T  T  R  *  S  S  C  I  I  F  W  D  S  L  T  K  E  V  A  S  R  F  F  E  L  T  *  L  I  I  I  Y  F  C  K  E  C  N  N  E  N  L  R  L  V  F  T  *  F  *  T  V  L  D  V  D  V  D  *  *  *  Y  I  I  </first_frame>
            <second_frame>  F  K  L  A  N  E  I  E  N  A  G  Y  T  G  K  *  G  T  F  E  Q  L  *  G  K  G  S  P  Y  C  Q  C  C  I  K  M  V  S  E  V  I  *  F  L  S  W  L  F  P  W  F  S  F  R  S  V  S  T  A  S  L  I  R  L  M  S  Y  I  S  V  T  K  V  *  L  L  L  E  S  V  Y  Y  V  K  Y  C  A  T  G  C  I  *  V  L  L  Y  N  D  D  V  N  C  H  K  L  D  V  L  V  *  G  *  I  S  V  I  L  I  S  M  S  L  H  V  F  G  R  W  K  I  P  *  K  V  S  F  Y  F  N  L  R  H  V  D  P  P  A  L  F  S  G  I  P  *  L  K  K  L  L  A  G  S  L  N  L  L  N  L  *  L  F  I  F  A  K  N  A  I  T  K  I  *  D  *  C  S  H  S  F  E  L  S  *  M  L  M  L  I  D  D  D  I  L  * </second_frame>
            <third_frame>   L  S  L  L  T  R  L  K  M  Q  D  I  Q  G  N  E  V  P  L  S  N  Y  R  G  K  V  L  L  I  V  N  V  A  S  K  W  *  V  K  *  S  S  F  C  L  G  F  F  L  G  F  H  L  E  V  S  P  L  L  H  *  L  D  L  *  V  I  *  V  *  L  R  S  S  Y  F  W  R  V  Y  T  M  S  N  I  V  L  L  G  A  F  K  F  Y  C  T  M  M  M  S  I  A  T  N  *  M  Y  S  F  R  D  E  F  L  L  F  *  L  V  C  L  C  M  F  L  V  D  G  K  F  L  K  R  F  L  F  I  L  I  Y  D  T  L  I  L  L  H  Y  F  L  G  F  P  D  *  R  S  C  *  Q  V  L  *  T  Y  L  T  Y  N  Y  L  F  L  Q  R  M  Q  *  R  K  F  E  I  S  V  H  I  V  L  N  C  L  R  C  *  C  *  L  M  M  I  Y  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0038F03.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="55639" e_stop="55700"/>
            <exon e_start="56825" e_stop="56901"/>
            <exon e_start="57675" e_stop="57736"/>
            <exon e_start="57834" e_stop="57953"/>
            <exon e_start="58738" e_stop="58905"/>
            <exon e_start="59145" e_stop="59455"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.942" e_score="0.887"/>
          <exon-intron don_prob="0.996" acc_prob="0.991" e_score="0.857"/>
          <exon-intron don_prob="0.764" acc_prob="0.000" e_score="0.903"/>
          <exon-intron don_prob="0.978" acc_prob="0.997" e_score="0.858"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="0.946"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.887">
            <gDNA_exon_boundary e_start="55639" e_stop="55700" e_length="62"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.942">
            <gDNA_intron_boundary i_start="55701" i_stop="56824" i_length="1124"/>
          </intron>
          <exon e_serial="2" e_score="0.857">
            <gDNA_exon_boundary e_start="56825" e_stop="56901" e_length="77"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.991">
            <gDNA_intron_boundary i_start="56902" i_stop="57674" i_length="773"/>
          </intron>
          <exon e_serial="3" e_score="0.903">
            <gDNA_exon_boundary e_start="57675" e_stop="57736" e_length="62"/>
          </exon>
          <intron i_serial="3" don_prob="0.764" acc_prob="0.000">
            <gDNA_intron_boundary i_start="57737" i_stop="57833" i_length="97"/>
          </intron>
          <exon e_serial="4" e_score="0.858">
            <gDNA_exon_boundary e_start="57834" e_stop="57953" e_length="120"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.997">
            <gDNA_intron_boundary i_start="57954" i_stop="58737" i_length="784"/>
          </intron>
          <exon e_serial="5" e_score="0.946">
            <gDNA_exon_boundary e_start="58738" e_stop="58905" e_length="168"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="58906" i_stop="59144" i_length="239"/>
          </intron>
          <exon e_serial="6" e_score="0.987">
            <gDNA_exon_boundary e_start="59145" e_stop="59455" e_length="311"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55639" stop="55700"/>
              <exon start="56825" stop="56901"/>
              <exon start="57675" stop="57736"/>
              <exon start="57834" stop="57953"/>
              <exon start="58738" stop="58905"/>
              <exon start="59145" stop="59455"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335614" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCCATCTTTTTCTCTTATGGCTGAAGGATCACCAAAATCTATTTATGATTTCACTGTGAAG : GATATACAGGGAAATGAGGTACCTTTGAGCAATTATAGGGGAAAGGTTCTCCTTATTGTCAATGTTGCATCAAAATG : TGGTTTAACAGATTCAAACTACAAGGAGCTGAATATTTTGTATGAGAAGTACAAAGATCAAG : GGTTTTGAAATTTTAGCATTTCCTTGTAACCAGTTCCTGTGGCAAGAACCCGGAACAAATGAGGAGATTCAGCAAACTGTATGCACCAGGTTCAAAGCTGAATTCCCTGTATTTGAAAAG : ATTGATGTGAACGGGGATAATGCTGCACCACTTTACAAGTTCTTGAAATCAGAAAAAGGCGGTTTCCTTGGAAGTGCTGTCAAGTGGAACTTCACCAAATTCCTTGTGGACAAAGAAGGAAAGGTTGTGGAACGATATGCACCCAAGACACCACCTCTTCAGTTTGAG : AAAGACATAAAAAATCTGTTGGGTGTGGCTTGAGCACTACAGGTGTGAAAGTTCAGCATATGTATTGACCTTCAGTTGGAAGTGCTTTCATGGTTCTATCTTTTTCCTTCTTCCCTGCCTACGAAACAAGCGAGCTTGTACCCCACCCCCTTAGTTTTTCCTTGTTGATGTACTTTGGTTGTGTAAACTCGTTCATTGCCATGAATTTGTAATAAAAGTTGCATAGTAGTTGTTTTAATGACTCGGGACTGTAGTTGCTCGATATACAAGTATGTTATCGCCTTAATAATAAGAAATAAGTTGTGTGCAGG</gDNA_template>
            <first_frame> T  H  L  F  L  L  W  L  K  D  H  Q  N  L  F  M  I  S  L  *  R :   I  Y  R  E  M  R  Y  L  *  A  I  I  G  E  R  F  S  L  L  S  M  L  H  Q  N   : V  V  *  Q  I  Q  T  T  R  S  *  I  F  C  M  R  S  T  K  I  K  :  G  F  E  I  L  A  F  P  C  N  Q  F  L  W  Q  E  P  G  T  N  E  E  I  Q  Q  T  V  C  T  R  F  K  A  E  F  P  V  F  E  K  :  I  D  V  N  G  D  N  A  A  P  L  Y  K  F  L  K  S  E  K  G  G  F  L  G  S  A  V  K  W  N  F  T  K  F  L  V  D  K  E  G  K  V  V  E  R  Y  A  P  K  T  P  P  L  Q  F  E  :  K  D  I  K  N  L  L  G  V  A  *  A  L  Q  V  *  K  F  S  I  C  I  D  L  Q  L  E  V  L  S  W  F  Y  L  F  P  S  S  L  P  T  K  Q  A  S  L  Y  P  T  P  L  V  F  P  C  *  C  T  L  V  V  *  T  R  S  L  P  *  I  C  N  K  S  C  I  V  V  V  L  M  T  R  D  C  S  C  S  I  Y  K  Y  V  I  A  L  I  I  R  N  K  L  C  A   </first_frame>
            <second_frame>  P  I  F  F  S  Y  G  *  R  I  T  K  I  Y  L  *  F  H  C  E   : G  Y  T  G  K  *  G  T  F  E  Q  L  *  G  K  G  S  P  Y  C  Q  C  C  I  K  M  :  W  F  N  R  F  K  L  Q  G  A  E  Y  F  V  *  E  V  Q  R  S  R :   V  L  K  F  *  H  F  L  V  T  S  S  C  G  K  N  P  E  Q  M  R  R  F  S  K  L  Y  A  P  G  S  K  L  N  S  L  Y  L  K  R :   L  M  *  T  G  I  M  L  H  H  F  T  S  S  *  N  Q  K  K  A  V  S  L  E  V  L  S  S  G  T  S  P  N  S  L  W  T  K  K  E  R  L  W  N  D  M  H  P  R  H  H  L  F  S  L  R :   K  T  *  K  I  C  W  V  W  L  E  H  Y  R  C  E  S  S  A  Y  V  L  T  F  S  W  K  C  F  H  G  S  I  F  F  L  L  P  C  L  R  N  K  R  A  C  T  P  P  P  *  F  F  L  V  D  V  L  W  L  C  K  L  V  H  C  H  E  F  V  I  K  V  A  *  *  L  F  *  *  L  G  T  V  V  A  R  Y  T  S  M  L  S  P  *  *  *  E  I  S  C  V  Q  </second_frame>
            <third_frame>   P  S  F  S  L  M  A  E  G  S  P  K  S  I  Y  D  F  T  V  K  :  D  I  Q  G  N  E  V  P  L  S  N  Y  R  G  K  V  L  L  I  V  N  V  A  S  K  C :   G  L  T  D  S  N  Y  K  E  L  N  I  L  Y  E  K  Y  K  D  Q   : G  F  *  N  F  S  I  S  L  *  P  V  P  V  A  R  T  R  N  K  *  G  D  S  A  N  C  M  H  Q  V  Q  S  *  I  P  C  I  *  K   : D  *  C  E  R  G  *  C  C  T  T  L  Q  V  L  E  I  R  K  R  R  F  P  W  K  C  C  Q  V  E  L  H  Q  I  P  C  G  Q  R  R  K  G  C  G  T  I  C  T  Q  D  T  T  S  S  V  *   : E  R  H  K  K  S  V  G  C  G  L  S  T  T  G  V  K  V  Q  H  M  Y  *  P  S  V  G  S  A  F  M  V  L  S  F  S  F  F  P  A  Y  E  T  S  E  L  V  P  H  P  L  S  F  S  L  L  M  Y  F  G  C  V  N  S  F  I  A  M  N  L  *  *  K  L  H  S  S  C  F  N  D  S  G  L  *  L  L  D  I  Q  V  C  Y  R  L  N  N  K  K  *  V  V  C  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57707" stop="57736"/>
                    <exon start="57834" stop="57953"/>
                    <exon start="58738" stop="58905"/>
                    <exon start="59145" stop="59177"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>348</number_coding_nucleotides>
                  <number_encoded_amino_acids>116</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFCMRSTKIKGFEILAFPCNQFLWQEPGTNEEIQQTVCTRFKAEFPVFEKIDVNGDNAAPLYKFLKSEKGGFLGSAVKWNFTKFLVDKEGKVVERYAPKTPPLQFEKDIKNLLGVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="61450" PGL_stop="60078"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61450" e_stop="60915"/>
            <exon e_start="60582" e_stop="60078"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.981" acc_prob="0.999" e_score="0.994"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="61450" e_stop="60915" e_length="536"/>
          </exon>
          <intron i_serial="1" don_prob="0.981" acc_prob="0.999">
            <gDNA_intron_boundary i_start="60914" i_stop="60583" i_length="332"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="60582" e_stop="60078" e_length="505"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61450" stop="60915"/>
              <exon start="60582" stop="60078"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U319943" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAAGAGAAAAACACTCAAAAAAGTTTGGAAGAAAAAAAAATGGAAACTTTTTCTCATCTATCATCAAGATCCAGGTCTTGTGAGAGCTTTTTTAATGATGGTGTTGAGCAAATACCAGGGGAAGTAGTGGGAGAGGAAGAAGAAGAAGAAGAACAAATGGAGGAGATTACCAACACACCACAAAGTGGATGGTTTAGGAATGTTGAGGAGCCATGGTTGAATAGTAGATCTCAAAAGAAGAAGAAAAATCAAGTGTTTCTTGAAGGGTATGTAGAAAATTCAGATGAAGATGAATTAGGGAGGACAAAGAGTTTGACTGATGATGATTTAGAGGAGCTTAAAGGGTGTTTAGATCTTGGTTTTGGTTTCAGTTATGATGAAATTCCTGAGCTTTGTAATACTTTACCAGCTCTTGAACTTTGCTATTCTATGAGCCAAAAGTACCTTGATGAACAGCAAAAGTGTTCTGATGCTATGTCTGATACTGGTTCTTCTGGATCTGGTCATGTTGCTAATTGGAAGATCTCTAGTCCTG : GTGATGATCCTGAAGATGTGAAAGCAAGGCTGAAATACTGGGCTCAAGCTGTGGCATGCACTGTTAAATTATGTAACTAAAAAGGGAAAAATGGAAGCCAAGAAAAGCTTAATGCAAGATGAGAGGGGAAATGAAATGATCTTTTCTTCATATGAAAGAGTACTTGTGCTGTGGTCTCTTTGCCTGGATCCTGAAAAAAAAAAGGCTATGGCCACAAGGCCAAGAAGAAGGTACCTCATGCTTTACCTGAAGATAGATTCAAAAAGAATCATGTCCATGATGGGTAGGCAAAGTTTAATCAAAATCCCAAAGTAGATGAAGAGGAAGGAAGAGATGTTTCAGGGCTAAAAGATTAACCAACACATGGACTAAAATCGATATAACTTTGTGTATCAGTTTTAGTCCCAAGATTGCAATTCTTCTTCATGTTTTAATTTTGTTTTCTTATGTAATGCTGATCAAAATACTGTTCTTGGTTATTAATAAATCAAGTTTCTTCCTTGTT</gDNA_template>
            <first_frame> R  R  E  K  H  S  K  K  F  G  R  K  K  N  G  N  F  F  S  S  I  I  K  I  Q  V  L  *  E  L  F  *  *  W  C  *  A  N  T  R  G  S  S  G  R  G  R  R  R  R  R  T  N  G  G  D  Y  Q  H  T  T  K  W  M  V  *  E  C  *  G  A  M  V  E  *  *  I  S  K  E  E  E  K  S  S  V  S  *  R  V  C  R  K  F  R  *  R  *  I  R  E  D  K  E  F  D  *  *  *  F  R  G  A  *  R  V  F  R  S  W  F  W  F  Q  L  *  *  N  S  *  A  L  *  Y  F  T  S  S  *  T  L  L  F  Y  E  P  K  V  P  *  *  T  A  K  V  F  *  C  Y  V  *  Y  W  F  F  W  I  W  S  C  C  *  L  E  D  L  *  S  W :   *  *  S  *  R  C  E  S  K  A  E  I  L  G  S  S  C  G  M  H  C  *  I  M  *  L  K  R  E  K  W  K  P  R  K  A  *  C  K  M  R  G  E  M  K  *  S  F  L  H  M  K  E  Y  L  C  C  G  L  F  A  W  I  L  K  K  K  R  L  W  P  Q  G  Q  E  E  G  T  S  C  F  T  *  R  *  I  Q  K  E  S  C  P  *  W  V  G  K  V  *  S  K  S  Q  S  R  *  R  G  R  K  R  C  F  R  A  K  R  L  T  N  T  W  T  K  I  D  I  T  L  C  I  S  F  S  P  K  I  A  I  L  L  H  V  L  I  L  F  S  Y  V  M  L  I  K  I  L  F  L  V  I  N  K  S  S  F  F  L  V </first_frame>
            <second_frame>  E  E  K  N  T  Q  K  S  L  E  E  K  K  M  E  T  F  S  H  L  S  S  R  S  R  S  C  E  S  F  F  N  D  G  V  E  Q  I  P  G  E  V  V  G  E  E  E  E  E  E  E  Q  M  E  E  I  T  N  T  P  Q  S  G  W  F  R  N  V  E  E  P  W  L  N  S  R  S  Q  K  K  K  K  N  Q  V  F  L  E  G  Y  V  E  N  S  D  E  D  E  L  G  R  T  K  S  L  T  D  D  D  L  E  E  L  K  G  C  L  D  L  G  F  G  F  S  Y  D  E  I  P  E  L  C  N  T  L  P  A  L  E  L  C  Y  S  M  S  Q  K  Y  L  D  E  Q  Q  K  C  S  D  A  M  S  D  T  G  S  S  G  S  G  H  V  A  N  W  K  I  S  S  P   : G  D  D  P  E  D  V  K  A  R  L  K  Y  W  A  Q  A  V  A  C  T  V  K  L  C  N  *  K  G  K  N  G  S  Q  E  K  L  N  A  R  *  E  G  K  *  N  D  L  F  F  I  *  K  S  T  C  A  V  V  S  L  P  G  S  *  K  K  K  G  Y  G  H  K  A  K  K  K  V  P  H  A  L  P  E  D  R  F  K  K  N  H  V  H  D  G  *  A  K  F  N  Q  N  P  K  V  D  E  E  E  G  R  D  V  S  G  L  K  D  *  P  T  H  G  L  K  S  I  *  L  C  V  S  V  L  V  P  R  L  Q  F  F  F  M  F  *  F  C  F  L  M  *  C  *  S  K  Y  C  S  W  L  L  I  N  Q  V  S  S  L   </second_frame>
            <third_frame>   K  R  K  T  L  K  K  V  W  K  K  K  K  W  K  L  F  L  I  Y  H  Q  D  P  G  L  V  R  A  F  L  M  M  V  L  S  K  Y  Q  G  K  *  W  E  R  K  K  K  K  K  N  K  W  R  R  L  P  T  H  H  K  V  D  G  L  G  M  L  R  S  H  G  *  I  V  D  L  K  R  R  R  K  I  K  C  F  L  K  G  M  *  K  I  Q  M  K  M  N  *  G  G  Q  R  V  *  L  M  M  I  *  R  S  L  K  G  V  *  I  L  V  L  V  S  V  M  M  K  F  L  S  F  V  I  L  Y  Q  L  L  N  F  A  I  L  *  A  K  S  T  L  M  N  S  K  S  V  L  M  L  C  L  I  L  V  L  L  D  L  V  M  L  L  I  G  R  S  L  V  L  :  V  M  I  L  K  M  *  K  Q  G  *  N  T  G  L  K  L  W  H  A  L  L  N  Y  V  T  K  K  G  K  M  E  A  K  K  S  L  M  Q  D  E  R  G  N  E  M  I  F  S  S  Y  E  R  V  L  V  L  W  S  L  C  L  D  P  E  K  K  K  A  M  A  T  R  P  R  R  R  Y  L  M  L  Y  L  K  I  D  S  K  R  I  M  S  M  M  G  R  Q  S  L  I  K  I  P  K  *  M  K  R  K  E  E  M  F  Q  G  *  K  I  N  Q  H  M  D  *  N  R  Y  N  F  V  Y  Q  F  *  S  Q  D  C  N  S  S  S  C  F  N  F  V  F  L  C  N  A  D  Q  N  T  V  L  G  Y  *  *  I  K  F  L  P  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61449" stop="60915"/>
                    <exon start="60582" stop="60503"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>612</number_coding_nucleotides>
                  <number_encoded_amino_acids>204</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EEKNTQKSLEEKKMETFSHLSSRSRSCESFFNDGVEQIPGEVVGEEEEEEEQMEEITNTPQSGWFRNVEEPWLNSRSQKKKKNQVFLEGYVENSDEDELGRTKSLTDDDLEELKGCLDLGFGFSYDEIPELCNTLPALELCYSMSQKYLDEQQKCSDAMSDTGSSGSGHVANWKISSPGDDPEDVKARLKYWAQAVACTVKLCN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="67322" PGL_stop="67983"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67322" e_stop="67983"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="67322" e_stop="67983" e_length="662"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67322" stop="67983"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326694" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTCCTATACAATTTATTTTTTCAGAATGCCCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAAGAACAAGTTGTTTCTGGAATGATGTACTATATAACACTTGTGGCAACTGATGATGGAAATAAAAAAGATTATGAAGCCAAGATTTGGGTGAAGGAATGGGAGGACTTCAAGAAAGTTATAAGCTTCAAGCTTGTTGGTAAGGATAGTGCAATAATTGGGGGCTTTACCGATGTTCCATTCCCAAACAAACGCGAGTTCCAAGATCTTACACGTTTTGCTATTCAGGATTATAATAAGAAAGAGGTTATTTACAATGACTTACTCATCTTCTATTTTTTCCTGTTAATTTCATATTCAAATTTATAATATTTTAATTTTGAACCCATTGCATGAGATATCTAATAATTATTTCATTTGAATGAACGTCATATACAATTTATTTTTCAGAATGCCCATTTGGAGTTTGTAGAAAATCTGAATGTGAAAAAACAAGTTGTTGCTGGAATGTTGTACTATATAACATTTGCAGCAACTGATGCTGGAAAGAAAAACATATATGAAACAAAGATTTGGGTGAAGGAATGGGAAGACTTCAAAAAAGTTGTAGAGTTCAAGCTTGTTGGTGATGATGGTGCAAAGCTTGGGGGGATTATCAATGT</gDNA_template>
            <first_frame> V  L  Y  N  L  F  F  Q  N  A  H  L  E  F  V  E  V  L  N  V  K  E  Q  V  V  S  G  M  M  Y  Y  I  T  L  V  A  T  D  D  G  N  K  K  D  Y  E  A  K  I  W  V  K  E  W  E  D  F  K  K  V  I  S  F  K  L  V  G  K  D  S  A  I  I  G  G  F  T  D  V  P  F  P  N  K  R  E  F  Q  D  L  T  R  F  A  I  Q  D  Y  N  K  K  E  V  I  Y  N  D  L  L  I  F  Y  F  F  L  L  I  S  Y  S  N  L  *  Y  F  N  F  E  P  I  A  *  D  I  *  *  L  F  H  L  N  E  R  H  I  Q  F  I  F  Q  N  A  H  L  E  F  V  E  N  L  N  V  K  K  Q  V  V  A  G  M  L  Y  Y  I  T  F  A  A  T  D  A  G  K  K  N  I  Y  E  T  K  I  W  V  K  E  W  E  D  F  K  K  V  V  E  F  K  L  V  G  D  D  G  A  K  L  G  G  I  I  N   </first_frame>
            <second_frame>  S  Y  T  I  Y  F  F  R  M  P  I  W  S  L  *  K  F  *  M  *  K  N  K  L  F  L  E  *  C  T  I  *  H  L  W  Q  L  M  M  E  I  K  K  I  M  K  P  R  F  G  *  R  N  G  R  T  S  R  K  L  *  A  S  S  L  L  V  R  I  V  Q  *  L  G  A  L  P  M  F  H  S  Q  T  N  A  S  S  K  I  L  H  V  L  L  F  R  I  I  I  R  K  R  L  F  T  M  T  Y  S  S  S  I  F  S  C  *  F  H  I  Q  I  Y  N  I  L  I  L  N  P  L  H  E  I  S  N  N  Y  F  I  *  M  N  V  I  Y  N  L  F  F  R  M  P  I  W  S  L  *  K  I  *  M  *  K  N  K  L  L  L  E  C  C  T  I  *  H  L  Q  Q  L  M  L  E  R  K  T  Y  M  K  Q  R  F  G  *  R  N  G  K  T  S  K  K  L  *  S  S  S  L  L  V  M  M  V  Q  S  L  G  G  L  S  M  </second_frame>
            <third_frame>   P  I  Q  F  I  F  S  E  C  P  F  G  V  C  R  S  F  E  C  E  R  T  S  C  F  W  N  D  V  L  Y  N  T  C  G  N  *  *  W  K  *  K  R  L  *  S  Q  D  L  G  E  G  M  G  G  L  Q  E  S  Y  K  L  Q  A  C  W  *  G  *  C  N  N  W  G  L  Y  R  C  S  I  P  K  Q  T  R  V  P  R  S  Y  T  F  C  Y  S  G  L  *  *  E  R  G  Y  L  Q  *  L  T  H  L  L  F  F  P  V  N  F  I  F  K  F  I  I  F  *  F  *  T  H  C  M  R  Y  L  I  I  I  S  F  E  *  T  S  Y  T  I  Y  F  S  E  C  P  F  G  V  C  R  K  S  E  C  E  K  T  S  C  C  W  N  V  V  L  Y  N  I  C  S  N  *  C  W  K  E  K  H  I  *  N  K  D  L  G  E  G  M  G  R  L  Q  K  S  C  R  V  Q  A  C  W  *  *  W  C  K  A  W  G  D  Y  Q  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67322" stop="67690"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>366</number_coding_nucleotides>
                  <number_encoded_amino_acids>122</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLYNLFFQNAHLEFVEVLNVKEQVVSGMMYYITLVATDDGNKKDYEAKIWVKEWEDFKKVISFKLVGKDSAIIGGFTDVPFPNKREFQDLTRFAIQDYNKKEVIYNDLLIFYFFLLISYSNL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67730" stop="67981"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFHLNERHIQFIFQNAHLEFVENLNVKKQVVAGMLYYITFAATDAGKKNIYETKIWVKEWEDFKKVVEFKLVGDDGAKLGGIIN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="68398" PGL_stop="69960"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68398" e_stop="68679"/>
            <exon e_start="68782" e_stop="69063"/>
            <exon e_start="69145" e_stop="69615"/>
            <exon e_start="69942" e_stop="69960"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.945" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.994" e_score="0.996"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.960"/>
          <exon-only e_score="0.737"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="68398" e_stop="68679" e_length="282"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.945">
            <gDNA_intron_boundary i_start="68680" i_stop="68781" i_length="102"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="68782" e_stop="69063" e_length="282"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.994">
            <gDNA_intron_boundary i_start="69064" i_stop="69144" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="0.960">
            <gDNA_exon_boundary e_start="69145" e_stop="69615" e_length="471"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="69616" i_stop="69941" i_length="326"/>
          </intron>
          <exon e_serial="4" e_score="0.737">
            <gDNA_exon_boundary e_start="69942" e_stop="69960" e_length="19"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68398" stop="68679"/>
              <exon start="68782" stop="69063"/>
              <exon start="69145" stop="69615"/>
              <exon start="69942" stop="69960"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U314427" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGGCTCATTTGGAGTTTGTAGAAGTTTTGAATGTGAAGGAACAAGTTGTTGCTGGAATGATGTACTATATAACACTTGCGGTAACTGATGCTGGAAAGAAGAAAATATATGAAGCTAACATTTGGGTGAAAGAATGGGAGCACTTCATAAAAGTTGTGGAATTTAAGCCTGTTAGTGATGATAGTGTAAAAACTGGAGACATTGTCGATGTTCCAGATCCAAACATCCCCCCACTTCAAGATCTTGCTCGTTTTGCTGTGCAGGATTATAATAAGGCACAG : AATGCTCATTTAGAGTATGTAGAAAACTTGAATGTGAAAGAACAACTTGTTGCTGGAACGTTATACTACATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATACGAAACTAAGATTTGGGTGAAGGAATGGGAGGACTTCAAAAAAGTTGTAGAATTCAAGCTTGTTGGTGATGATAGTCCAAATCCTGGGGGCATTACCAATGTTCCATTCCCAAACCTCCCCGAGTTCAAAGATCTTGCTCGTTTTGCTGTTCAAGATTATAATAAGAAAGAG : AATGCTCATTTGGAGTTTGTAGAAAATTTGAATGTGAAGGAACAAGTTGTTGCTGGAATAATATACTATATAACACTTGTGGCAACTGATGCTGGAAAGAAGAAAATATATGAGACCAAGATTTTGGTGAAGGGATGGGAGAATTTCAAGGAAGTTCAAGATTTCAAGCTTGTTGGTGATGCCACTAAGTGAAATGAAACTACTTTTATCTTTGCGTGAAATAAAGCCACTTGTTTGGCATGAAGTTATTGTTATGTTTGTGACAAATAAAGCCACTTCTTTGGCATAAAATTACTATTATGTTTATGAGAAATAAAATCAGATCTATGTATAGTATCTGAAAGTATTCGATTGTCTTGTTGTCAATTGTATTTGAATAATTTTAAGTTTGTAAGATTGATAAATGCATGTTTATGGGATGATAAATATTGTTTGAATTTAATATTTTATTGCTAATACGTATCTATATAT : AAACACTAATAAAAAACAA</gDNA_template>
            <first_frame> K  A  H  L  E  F  V  E  V  L  N  V  K  E  Q  V  V  A  G  M  M  Y  Y  I  T  L  A  V  T  D  A  G  K  K  K  I  Y  E  A  N  I  W  V  K  E  W  E  H  F  I  K  V  V  E  F  K  P  V  S  D  D  S  V  K  T  G  D  I  V  D  V  P  D  P  N  I  P  P  L  Q  D  L  A  R  F  A  V  Q  D  Y  N  K  A  Q  :  N  A  H  L  E  Y  V  E  N  L  N  V  K  E  Q  L  V  A  G  T  L  Y  Y  I  T  L  V  A  T  D  A  G  K  K  K  I  Y  E  T  K  I  W  V  K  E  W  E  D  F  K  K  V  V  E  F  K  L  V  G  D  D  S  P  N  P  G  G  I  T  N  V  P  F  P  N  L  P  E  F  K  D  L  A  R  F  A  V  Q  D  Y  N  K  K  E  :  N  A  H  L  E  F  V  E  N  L  N  V  K  E  Q  V  V  A  G  I  I  Y  Y  I  T  L  V  A  T  D  A  G  K  K  K  I  Y  E  T  K  I  L  V  K  G  W  E  N  F  K  E  V  Q  D  F  K  L  V  G  D  A  T  K  *  N  E  T  T  F  I  F  A  *  N  K  A  T  C  L  A  *  S  Y  C  Y  V  C  D  K  *  S  H  F  F  G  I  K  L  L  L  C  L  *  E  I  K  S  D  L  C  I  V  S  E  S  I  R  L  S  C  C  Q  L  Y  L  N  N  F  K  F  V  R  L  I  N  A  C  L  W  D  D  K  Y  C  L  N  L  I  F  Y  C  *  Y  V  S  I  Y  :  K  H  *  *  K  T  </first_frame>
            <second_frame>  R  L  I  W  S  L  *  K  F  *  M  *  R  N  K  L  L  L  E  *  C  T  I  *  H  L  R  *  L  M  L  E  R  R  K  Y  M  K  L  T  F  G  *  K  N  G  S  T  S  *  K  L  W  N  L  S  L  L  V  M  I  V  *  K  L  E  T  L  S  M  F  Q  I  Q  T  S  P  H  F  K  I  L  L  V  L  L  C  R  I  I  I  R  H  R :   M  L  I  *  S  M  *  K  T  *  M  *  K  N  N  L  L  L  E  R  Y  T  T  *  H  L  W  Q  L  M  L  E  R  R  K  Y  T  K  L  R  F  G  *  R  N  G  R  T  S  K  K  L  *  N  S  S  L  L  V  M  I  V  Q  I  L  G  A  L  P  M  F  H  S  Q  T  S  P  S  S  K  I  L  L  V  L  L  F  K  I  I  I  R  K  R :   M  L  I  W  S  L  *  K  I  *  M  *  R  N  K  L  L  L  E  *  Y  T  I  *  H  L  W  Q  L  M  L  E  R  R  K  Y  M  R  P  R  F  W  *  R  D  G  R  I  S  R  K  F  K  I  S  S  L  L  V  M  P  L  S  E  M  K  L  L  L  S  L  R  E  I  K  P  L  V  W  H  E  V  I  V  M  F  V  T  N  K  A  T  S  L  A  *  N  Y  Y  Y  V  Y  E  K  *  N  Q  I  Y  V  *  Y  L  K  V  F  D  C  L  V  V  N  C  I  *  I  I  L  S  L  *  D  *  *  M  H  V  Y  G  M  I  N  I  V  *  I  *  Y  F  I  A  N  T  Y  L  Y  I :   N  T  N  K  K  Q </second_frame>
            <third_frame>   G  S  F  G  V  C  R  S  F  E  C  E  G  T  S  C  C  W  N  D  V  L  Y  N  T  C  G  N  *  C  W  K  E  E  N  I  *  S  *  H  L  G  E  R  M  G  A  L  H  K  S  C  G  I  *  A  C  *  *  *  *  C  K  N  W  R  H  C  R  C  S  R  S  K  H  P  P  T  S  R  S  C  S  F  C  C  A  G  L  *  *  G  T   : E  C  S  F  R  V  C  R  K  L  E  C  E  R  T  T  C  C  W  N  V  I  L  H  N  T  C  G  N  *  C  W  K  E  E  N  I  R  N  *  D  L  G  E  G  M  G  G  L  Q  K  S  C  R  I  Q  A  C  W  *  *  *  S  K  S  W  G  H  Y  Q  C  S  I  P  K  P  P  R  V  Q  R  S  C  S  F  C  C  S  R  L  *  *  E  R   : E  C  S  F  G  V  C  R  K  F  E  C  E  G  T  S  C  C  W  N  N  I  L  Y  N  T  C  G  N  *  C  W  K  E  E  N  I  *  D  Q  D  F  G  E  G  M  G  E  F  Q  G  S  S  R  F  Q  A  C  W  *  C  H  *  V  K  *  N  Y  F  Y  L  C  V  K  *  S  H  L  F  G  M  K  L  L  L  C  L  *  Q  I  K  P  L  L  W  H  K  I  T  I  M  F  M  R  N  K  I  R  S  M  Y  S  I  *  K  Y  S  I  V  L  L  S  I  V  F  E  *  F  *  V  C  K  I  D  K  C  M  F  M  G  *  *  I  L  F  E  F  N  I  L  L  L  I  R  I  Y  I   : *  T  L  I  K  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68398" stop="68679"/>
                    <exon start="68782" stop="69063"/>
                    <exon start="69145" stop="69336"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>753</number_coding_nucleotides>
                  <number_encoded_amino_acids>251</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KAHLEFVEVLNVKEQVVAGMMYYITLAVTDAGKKKIYEANIWVKEWEHFIKVVEFKPVSDDSVKTGDIVDVPDPNIPPLQDLARFAVQDYNKAQNAHLEYVENLNVKEQLVAGTLYYITLVATDAGKKKIYETKIWVKEWEDFKKVVEFKLVGDDSPNPGGITNVPFPNLPEFKDLARFAVQDYNKKENAHLEFVENLNVKEQVVAGIIYYITLVATDAGKKKIYETKILVKGWENFKEVQDFKLVGDATK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="76955" PGL_stop="74146"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="76955" e_stop="76721"/>
            <exon e_start="76265" e_stop="75970"/>
            <exon e_start="75650" e_stop="75329"/>
            <exon e_start="74623" e_stop="74146"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.968" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="76955" e_stop="76721" e_length="235"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="76720" i_stop="76266" i_length="455"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="76265" e_stop="75970" e_length="296"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.968">
            <gDNA_intron_boundary i_start="75969" i_stop="75651" i_length="319"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="75650" e_stop="75329" e_length="322"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="75328" i_stop="74624" i_length="705"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="74623" e_stop="74146" e_length="478"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76955" stop="76721"/>
              <exon start="76265" stop="75970"/>
              <exon start="75650" stop="75329"/>
              <exon start="74623" stop="74146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317623" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATTTTCTACATCATCTTTACTTTAAGAAAACTAAAAGAAATGGCATCTCTGATCTCTAGCTGGGCTTCACAAGTGAACACTGTGCCTGAAAGGTATGTGGTGCCTACTGAGAAAAGATTGAATGTAAATGTCCCAATTGGTAAAGACATTCCAGTTATTGATTTGTCACATCCTAATTCTGCCCTCATAGCTGAACAAATCATCAAAGCTTCTCAAGACTATGGAGTTTTTCAG : GTGATTAACCATGGAGTGTCACAAGAGTTGATTGGTGATGTCCTTGAAGTTTGTGATGAATTTTTCAAGTTGCCAATTGAGGACTTGGAAAAGTATACTGAAGAAGAAGAGTTGAGTGAATTTGAGCCAAATCTTGACCAGAAACCAAAGCTTTATATTGAAAAGGAATATAAGCCTAAGAAGAATGGTAAGAATGATAAAGAAGTCATTTTTTGGAAAGACACTTTTGCTCATTGTACTCATCCTACCAAAGAAGATAGAATTAATTCTTGGCCTGAAAAGCCAGCAAAATATAG : GGAAGTGATTGGAAAATATAGTGAGGGAGTGAGGAAGGCAAATTTGAGAATTTTGGAGCTAATGTGTGAAGGATTGGGACTTGAAAAGGATTACTTTGCAAATGAGCTGAGCCATATTCAGTATATGGCTATAAACCTTTACCCAAAATGCCCCGACCCGACTGTAACAGCTGGAGCCGTGGAACATAATGACGGCGGAGTCATCAACTTGCTTTTACAAGAATTGGGCGGCTTACATGTGCGCCGTCAGAAAGATGGACAGTGGCTTGCTGTTGAGCCCATTCCTGGTGCATTGGTTTGCATCAATGGCATGATTTTGAAG : GTGATTAGCAATGGGAAGTTAGAAAGTGGAATACATAGAGTGGCTACAAATTCAGTGAGAGATAGAATATCTCTTGGATGTTTAACTAGTCCTTCTTGTGATGGAAAATGCATAATTGAGCCTGCTAAACCACTTTTAAGTGAAACTAATCCACCTAAATACAAGTCATTTTCCTACACTGAGTATTTGAAGATTTTCTTCAGTGACACCTCTGAATTTGAAGCTGCACTCAATCCATACAAAATTTAATTAATTAATTTATCACTATGGGATAAATTGATGTGTTTCTTTATTTTGGAGGTACCAAAAATAATCATTGATGAATAAATTTTGTGTGTGTGTGTGTGTTTATTAATGTTATGTTTTGGATTTTCAATAATTTCATGCTACTATGTATTGTACTACTTCCTTTTGTAATAGTGATTTGAGTTTGTGATATAAATAAAACAATTTCAATAAATAAAGGTGTGTTTGAAGA</gDNA_template>
            <first_frame> N  F  L  H  H  L  Y  F  K  K  T  K  R  N  G  I  S  D  L  *  L  G  F  T  S  E  H  C  A  *  K  V  C  G  A  Y  *  E  K  I  E  C  K  C  P  N  W  *  R  H  S  S  Y  *  F  V  T  S  *  F  C  P  H  S  *  T  N  H  Q  S  F  S  R  L  W  S  F  S   : G  D  *  P  W  S  V  T  R  V  D  W  *  C  P  *  S  L  *  *  I  F  Q  V  A  N  *  G  L  G  K  V  Y  *  R  R  R  V  E  *  I  *  A  K  S  *  P  E  T  K  A  L  Y  *  K  G  I  *  A  *  E  E  W  *  E  *  *  R  S  H  F  L  E  R  H  F  C  S  L  Y  S  S  Y  Q  R  R  *  N  *  F  L  A  *  K  A  S  K  I  *  :  G  S  D  W  K  I  *  *  G  S  E  E  G  K  F  E  N  F  G  A  N  V  *  R  I  G  T  *  K  G  L  L  C  K  *  A  E  P  Y  S  V  Y  G  Y  K  P  L  P  K  M  P  R  P  D  C  N  S  W  S  R  G  T  *  *  R  R  S  H  Q  L  A  F  T  R  I  G  R  L  T  C  A  P  S  E  R  W  T  V  A  C  C  *  A  H  S  W  C  I  G  L  H  Q  W  H  D  F  E   : G  D  *  Q  W  E  V  R  K  W  N  T  *  S  G  Y  K  F  S  E  R  *  N  I  S  W  M  F  N  *  S  F  L  *  W  K  M  H  N  *  A  C  *  T  T  F  K  *  N  *  S  T  *  I  Q  V  I  F  L  H  *  V  F  E  D  F  L  Q  *  H  L  *  I  *  S  C  T  Q  S  I  Q  N  L  I  N  *  F  I  T  M  G  *  I  D  V  F  L  Y  F  G  G  T  K  N  N  H  *  *  I  N  F  V  C  V  C  V  F  I  N  V  M  F  W  I  F  N  N  F  M  L  L  C  I  V  L  L  P  F  V  I  V  I  *  V  C  D  I  N  K  T  I  S  I  N  K  G  V  F  E   </first_frame>
            <second_frame>  I  F  Y  I  I  F  T  L  R  K  L  K  E  M  A  S  L  I  S  S  W  A  S  Q  V  N  T  V  P  E  R  Y  V  V  P  T  E  K  R  L  N  V  N  V  P  I  G  K  D  I  P  V  I  D  L  S  H  P  N  S  A  L  I  A  E  Q  I  I  K  A  S  Q  D  Y  G  V  F  Q  :  V  I  N  H  G  V  S  Q  E  L  I  G  D  V  L  E  V  C  D  E  F  F  K  L  P  I  E  D  L  E  K  Y  T  E  E  E  E  L  S  E  F  E  P  N  L  D  Q  K  P  K  L  Y  I  E  K  E  Y  K  P  K  K  N  G  K  N  D  K  E  V  I  F  W  K  D  T  F  A  H  C  T  H  P  T  K  E  D  R  I  N  S  W  P  E  K  P  A  K  Y  R :   E  V  I  G  K  Y  S  E  G  V  R  K  A  N  L  R  I  L  E  L  M  C  E  G  L  G  L  E  K  D  Y  F  A  N  E  L  S  H  I  Q  Y  M  A  I  N  L  Y  P  K  C  P  D  P  T  V  T  A  G  A  V  E  H  N  D  G  G  V  I  N  L  L  L  Q  E  L  G  G  L  H  V  R  R  Q  K  D  G  Q  W  L  A  V  E  P  I  P  G  A  L  V  C  I  N  G  M  I  L  K  :  V  I  S  N  G  K  L  E  S  G  I  H  R  V  A  T  N  S  V  R  D  R  I  S  L  G  C  L  T  S  P  S  C  D  G  K  C  I  I  E  P  A  K  P  L  L  S  E  T  N  P  P  K  Y  K  S  F  S  Y  T  E  Y  L  K  I  F  F  S  D  T  S  E  F  E  A  A  L  N  P  Y  K  I  *  L  I  N  L  S  L  W  D  K  L  M  C  F  F  I  L  E  V  P  K  I  I  I  D  E  *  I  L  C  V  C  V  C  L  L  M  L  C  F  G  F  S  I  I  S  C  Y  Y  V  L  Y  Y  F  L  L  *  *  *  F  E  F  V  I  *  I  K  Q  F  Q  *  I  K  V  C  L  K  </second_frame>
            <third_frame>   F  S  T  S  S  L  L  *  E  N  *  K  K  W  H  L  *  S  L  A  G  L  H  K  *  T  L  C  L  K  G  M  W  C  L  L  R  K  D  *  M  *  M  S  Q  L  V  K  T  F  Q  L  L  I  C  H  I  L  I  L  P  S  *  L  N  K  S  S  K  L  L  K  T  M  E  F  F  R :   *  L  T  M  E  C  H  K  S  *  L  V  M  S  L  K  F  V  M  N  F  S  S  C  Q  L  R  T  W  K  S  I  L  K  K  K  S  *  V  N  L  S  Q  I  L  T  R  N  Q  S  F  I  L  K  R  N  I  S  L  R  R  M  V  R  M  I  K  K  S  F  F  G  K  T  L  L  L  I  V  L  I  L  P  K  K  I  E  L  I  L  G  L  K  S  Q  Q  N  I   : G  K  *  L  E  N  I  V  R  E  *  G  R  Q  I  *  E  F  W  S  *  C  V  K  D  W  D  L  K  R  I  T  L  Q  M  S  *  A  I  F  S  I  W  L  *  T  F  T  Q  N  A  P  T  R  L  *  Q  L  E  P  W  N  I  M  T  A  E  S  S  T  C  F  Y  K  N  W  A  A  Y  M  C  A  V  R  K  M  D  S  G  L  L  L  S  P  F  L  V  H  W  F  A  S  M  A  *  F  *  R :   *  L  A  M  G  S  *  K  V  E  Y  I  E  W  L  Q  I  Q  *  E  I  E  Y  L  L  D  V  *  L  V  L  L  V  M  E  N  A  *  L  S  L  L  N  H  F  *  V  K  L  I  H  L  N  T  S  H  F  P  T  L  S  I  *  R  F  S  S  V  T  P  L  N  L  K  L  H  S  I  H  T  K  F  N  *  L  I  Y  H  Y  G  I  N  *  C  V  S  L  F  W  R  Y  Q  K  *  S  L  M  N  K  F  C  V  C  V  C  V  Y  *  C  Y  V  L  D  F  Q  *  F  H  A  T  M  Y  C  T  T  S  F  C  N  S  D  L  S  L  *  Y  K  *  N  N  F  N  K  *  R  C  V  *  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76954" stop="76721"/>
                    <exon start="76265" stop="75970"/>
                    <exon start="75650" stop="75329"/>
                    <exon start="74623" stop="74375"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1098</number_coding_nucleotides>
                  <number_encoded_amino_acids>366</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFYIIFTLRKLKEMASLISSWASQVNTVPERYVVPTEKRLNVNVPIGKDIPVIDLSHPNSALIAEQIIKASQDYGVFQVINHGVSQELIGDVLEVCDEFFKLPIEDLEKYTEEEELSEFEPNLDQKPKLYIEKEYKPKKNGKNDKEVIFWKDTFAHCTHPTKEDRINSWPEKPAKYREVIGKYSEGVRKANLRILELMCEGLGLEKDYFANELSHIQYMAINLYPKCPDPTVTAGAVEHNDGGVINLLLQELGGLHVRRQKDGQWLAVEPIPGALVCINGMILKVISNGKLESGIHRVATNSVRDRISLGCLTSPSCDGKCIIEPAKPLLSETNPPKYKSFSYTEYLKIFFSDTSEFEAALNPYKI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="98223" PGL_stop="90003"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="98223" e_stop="97895"/>
            <exon e_start="97073" e_stop="97004"/>
            <exon e_start="94006" e_stop="93902"/>
            <exon e_start="93824" e_stop="93484"/>
            <exon e_start="93303" e_stop="93160"/>
            <exon e_start="92996" e_stop="92933"/>
            <exon e_start="92113" e_stop="91968"/>
            <exon e_start="91772" e_stop="91668"/>
            <exon e_start="90473" e_stop="90003"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.955" e_score="0.994"/>
          <exon-intron don_prob="0.992" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.966" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.922" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.965" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.906" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="98223" e_stop="97895" e_length="329"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.955">
            <gDNA_intron_boundary i_start="97894" i_stop="97074" i_length="821"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="97073" e_stop="97004" e_length="70"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="0.985">
            <gDNA_intron_boundary i_start="97003" i_stop="94007" i_length="2997"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="94006" e_stop="93902" e_length="105"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.982">
            <gDNA_intron_boundary i_start="93901" i_stop="93825" i_length="77"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="93824" e_stop="93484" e_length="341"/>
          </exon>
          <intron i_serial="4" don_prob="0.966" acc_prob="0.976">
            <gDNA_intron_boundary i_start="93483" i_stop="93304" i_length="180"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="93303" e_stop="93160" e_length="144"/>
          </exon>
          <intron i_serial="5" don_prob="0.922" acc_prob="0.983">
            <gDNA_intron_boundary i_start="93159" i_stop="92997" i_length="163"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="92996" e_stop="92933" e_length="64"/>
          </exon>
          <intron i_serial="6" don_prob="0.965" acc_prob="0.993">
            <gDNA_intron_boundary i_start="92932" i_stop="92114" i_length="819"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="92113" e_stop="91968" e_length="146"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="91967" i_stop="91773" i_length="195"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="91772" e_stop="91668" e_length="105"/>
          </exon>
          <intron i_serial="8" don_prob="0.983" acc_prob="0.906">
            <gDNA_intron_boundary i_start="91667" i_stop="90474" i_length="1194"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="90473" e_stop="90003" e_length="471"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98223" stop="97895"/>
              <exon start="97073" stop="97004"/>
              <exon start="94006" stop="93902"/>
              <exon start="93824" stop="93484"/>
              <exon start="93303" stop="93160"/>
              <exon start="92996" stop="92933"/>
              <exon start="92113" stop="91968"/>
              <exon start="91772" stop="91668"/>
              <exon start="90473" stop="90003"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U327029" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATAAAGAAGGATGAGGTCAATGAAAATAAAGAGGATGGATTTCAAGTCAGATTTTCCCAAGAAAATCGTGTAGGTGAGCTTGCATCATTAGAGAAACATGCTAAAAAAGTGTCAGTGTTTAGTAAAGCAGAAACCAGTAGGAAGAAATCTGGATTCCGTGGTCCAACTCACAGAGTTGACAAAGGAAGTGGTGATGCAAGAATGGTTATGGCATCAAATGTTGTAGAAGAGAATGTAGACGACTTATCTAATGATTTCTCGAGCACATTTATGCTTGATGAAGAGATGGAGCTTGAAAATAAAAAGGACCAGTCCTCTTTGAGTGGAAG : AGTTGAGGAAGAAGATGACGAGATGTACGTTAATGACGAGGCTATTGAGAAACTTGTCATTGTAACTCGG : AACACTCGGGCATCTCAGGTATCTGGAACTGTTGGAAAAGAATCAAAACCAATATCTACTGAGCTTGCTTCTGCAATAAATGATGGTCTCTACTTCTATGAGCAG : GAGCTTAAAGCTACACGATCCAGTCATAGATCTAACAACTCCAATAATGATCCTAGAGATGACATTAGTAGGTCTTTTGGTACTGGTGCTGCTTTATCCAAATCAAAGTATGCCGATCATTCTTCTGGAGGAAAAAACACTGAAGGTCCTGGAAGTTCCAACTCCCGGAGAAAGCAAAACAAAGGATTTGCTAAGCCACATCCAATACATAAGCAGCGGCTGTTTTCTGGAAATTACCGGAATCATGGGGTTTCTCGGAACAGTGTAGGAGCAATATCTGAAAGTCCACCTAGCGATTCAGTTGGGTTTTTCTTTGGTTCTACACCTCCTGACAGTCATGT : GTCTAGGCCTTCAAAGTTGAGTGCCTCTCCGCACAGCAATCTTGCTAGTAATAGTCCGCCAGTTGGTTCCATGCCTAAACCATTTCCACCCTTCCAGCATCCAAGTCACAAGCTGCTACAAGAAAATGGTTTTACACAGCAGCT : GTACAAGAAGTATCATAAGCGCTGTCTGACTGATCGCAAGAAACTTGGAATTGGTTGCAGTGAG : GAAATGAATACACTGTACAGGTTTTGGTCGTATTTTCTGCGGAACATGTTCATACGTTCTATGTACAATGAGTTCCAAAAGATGGCTCAAGAAGATGCAGCTGCTAATTATAACTATGGGATGGAGTGCCTATTTAGATTTTATAG : TTACGGTTTGGAAAAGGAATTTAGAGAGGACCTTTATGACGACTTTGAGAGATTGACGCTTGACACCTACAATAGGGGAAACCTTTACGGCCTTGAGAAGTACTG : GGCCTTTCACCATTTCCGTCAGCAACGAGGTCAGAGAGCACCTTTGAAGAAGCTTCCAGAACTGGATAGACTACTCAGAGAAGAGTTCCGAAATTTGGATGACTTTAAACATGCCAGAGGAGGTGCCAGTGCAAGCACAAAGGAGGACGGTCACTAACCAACAGTGTGATTCTCAGCTTCATTGAACCGTCTGTCAGCGAATTTTGATGCCTTACAGTCCATACAATGAGCTCAAGTTGCCGAATTAGCTTTCTGAGATGATCAAGGCAAAAATTTTGTATATAGAGCTTCTGTGAGGTTGGTTAATTTTTACCTCCGAGGTTGAGCTAAAATTTTACCATGAGGGGATGCAACCTTGTGCCTTTTTGTACTTTCATCTTAGGATTATAAGGTGTACATATAGGAGGAAGTTGAAAACAAAATAAAAATGAAAAAAAAAAATAAAAAAATGTAAAACTACCAAAAAAAAAA</gDNA_template>
            <first_frame> I  K  K  D  E  V  N  E  N  K  E  D  G  F  Q  V  R  F  S  Q  E  N  R  V  G  E  L  A  S  L  E  K  H  A  K  K  V  S  V  F  S  K  A  E  T  S  R  K  K  S  G  F  R  G  P  T  H  R  V  D  K  G  S  G  D  A  R  M  V  M  A  S  N  V  V  E  E  N  V  D  D  L  S  N  D  F  S  S  T  F  M  L  D  E  E  M  E  L  E  N  K  K  D  Q  S  S  L  S  G  R :   V  E  E  E  D  D  E  M  Y  V  N  D  E  A  I  E  K  L  V  I  V  T  R  :  N  T  R  A  S  Q  V  S  G  T  V  G  K  E  S  K  P  I  S  T  E  L  A  S  A  I  N  D  G  L  Y  F  Y  E  Q  :  E  L  K  A  T  R  S  S  H  R  S  N  N  S  N  N  D  P  R  D  D  I  S  R  S  F  G  T  G  A  A  L  S  K  S  K  Y  A  D  H  S  S  G  G  K  N  T  E  G  P  G  S  S  N  S  R  R  K  Q  N  K  G  F  A  K  P  H  P  I  H  K  Q  R  L  F  S  G  N  Y  R  N  H  G  V  S  R  N  S  V  G  A  I  S  E  S  P  P  S  D  S  V  G  F  F  F  G  S  T  P  P  D  S  H  V :   S  R  P  S  K  L  S  A  S  P  H  S  N  L  A  S  N  S  P  P  V  G  S  M  P  K  P  F  P  P  F  Q  H  P  S  H  K  L  L  Q  E  N  G  F  T  Q  Q  L :   Y  K  K  Y  H  K  R  C  L  T  D  R  K  K  L  G  I  G  C  S  E  :  E  M  N  T  L  Y  R  F  W  S  Y  F  L  R  N  M  F  I  R  S  M  Y  N  E  F  Q  K  M  A  Q  E  D  A  A  A  N  Y  N  Y  G  M  E  C  L  F  R  F  Y  S :   Y  G  L  E  K  E  F  R  E  D  L  Y  D  D  F  E  R  L  T  L  D  T  Y  N  R  G  N  L  Y  G  L  E  K  Y  W :   A  F  H  H  F  R  Q  Q  R  G  Q  R  A  P  L  K  K  L  P  E  L  D  R  L  L  R  E  E  F  R  N  L  D  D  F  K  H  A  R  G  G  A  S  A  S  T  K  E  D  G  H  *  P  T  V  *  F  S  A  S  L  N  R  L  S  A  N  F  D  A  L  Q  S  I  Q  *  A  Q  V  A  E  L  A  F  *  D  D  Q  G  K  N  F  V  Y  R  A  S  V  R  L  V  N  F  Y  L  R  G  *  A  K  I  L  P  *  G  D  A  T  L  C  L  F  V  L  S  S  *  D  Y  K  V  Y  I  *  E  E  V  E  N  K  I  K  M  K  K  K  N  K  K  M  *  N  Y  Q  K  K   </first_frame>
            <second_frame>  *  R  R  M  R  S  M  K  I  K  R  M  D  F  K  S  D  F  P  K  K  I  V  *  V  S  L  H  H  *  R  N  M  L  K  K  C  Q  C  L  V  K  Q  K  P  V  G  R  N  L  D  S  V  V  Q  L  T  E  L  T  K  E  V  V  M  Q  E  W  L  W  H  Q  M  L  *  K  R  M  *  T  T  Y  L  M  I  S  R  A  H  L  C  L  M  K  R  W  S  L  K  I  K  R  T  S  P  L  *  V  E   : E  L  R  K  K  M  T  R  C  T  L  M  T  R  L  L  R  N  L  S  L  *  L  G :   T  L  G  H  L  R  Y  L  E  L  L  E  K  N  Q  N  Q  Y  L  L  S  L  L  L  Q  *  M  M  V  S  T  S  M  S  R :   S  L  K  L  H  D  P  V  I  D  L  T  T  P  I  M  I  L  E  M  T  L  V  G  L  L  V  L  V  L  L  Y  P  N  Q  S  M  P  I  I  L  L  E  E  K  T  L  K  V  L  E  V  P  T  P  G  E  S  K  T  K  D  L  L  S  H  I  Q  Y  I  S  S  G  C  F  L  E  I  T  G  I  M  G  F  L  G  T  V  *  E  Q  Y  L  K  V  H  L  A  I  Q  L  G  F  S  L  V  L  H  L  L  T  V  M   : C  L  G  L  Q  S  *  V  P  L  R  T  A  I  L  L  V  I  V  R  Q  L  V  P  C  L  N  H  F  H  P  S  S  I  Q  V  T  S  C  Y  K  K  M  V  L  H  S  S   : C  T  R  S  I  I  S  A  V  *  L  I  A  R  N  L  E  L  V  A  V  R :   K  *  I  H  C  T  G  F  G  R  I  F  C  G  T  C  S  Y  V  L  C  T  M  S  S  K  R  W  L  K  K  M  Q  L  L  I  I  T  M  G  W  S  A  Y  L  D  F  I   : V  T  V  W  K  R  N  L  E  R  T  F  M  T  T  L  R  D  *  R  L  T  P  T  I  G  E  T  F  T  A  L  R  S  T   : G  P  F  T  I  S  V  S  N  E  V  R  E  H  L  *  R  S  F  Q  N  W  I  D  Y  S  E  K  S  S  E  I  W  M  T  L  N  M  P  E  E  V  P  V  Q  A  Q  R  R  T  V  T  N  Q  Q  C  D  S  Q  L  H  *  T  V  C  Q  R  I  L  M  P  Y  S  P  Y  N  E  L  K  L  P  N  *  L  S  E  M  I  K  A  K  I  L  Y  I  E  L  L  *  G  W  L  I  F  T  S  E  V  E  L  K  F  Y  H  E  G  M  Q  P  C  A  F  L  Y  F  H  L  R  I  I  R  C  T  Y  R  R  K  L  K  T  K  *  K  *  K  K  K  I  K  K  C  K  T  T  K  K  K  </second_frame>
            <third_frame>   K  E  G  *  G  Q  *  K  *  R  G  W  I  S  S  Q  I  F  P  R  K  S  C  R  *  A  C  I  I  R  E  T  C  *  K  S  V  S  V  *  *  S  R  N  Q  *  E  E  I  W  I  P  W  S  N  S  Q  S  *  Q  R  K  W  *  C  K  N  G  Y  G  I  K  C  C  R  R  E  C  R  R  L  I  *  *  F  L  E  H  I  Y  A  *  *  R  D  G  A  *  K  *  K  G  P  V  L  F  E  W  K  :  S  *  G  R  R  *  R  D  V  R  *  *  R  G  Y  *  E  T  C  H  C  N  S   : E  H  S  G  I  S  G  I  W  N  C  W  K  R  I  K  T  N  I  Y  *  A  C  F  C  N  K  *  W  S  L  L  L  *  A   : G  A  *  S  Y  T  I  Q  S  *  I  *  Q  L  Q  *  *  S  *  R  *  H  *  *  V  F  W  Y  W  C  C  F  I  Q  I  K  V  C  R  S  F  F  W  R  K  K  H  *  R  S  W  K  F  Q  L  P  E  K  A  K  Q  R  I  C  *  A  T  S  N  T  *  A  A  A  V  F  W  K  L  P  E  S  W  G  F  S  E  Q  C  R  S  N  I  *  K  S  T  *  R  F  S  W  V  F  L  W  F  Y  T  S  *  Q  S  C  :  V  *  A  F  K  V  E  C  L  S  A  Q  Q  S  C  *  *  *  S  A  S  W  F  H  A  *  T  I  S  T  L  P  A  S  K  S  Q  A  A  T  R  K  W  F  Y  T  A  A  :  V  Q  E  V  S  *  A  L  S  D  *  S  Q  E  T  W  N  W  L  Q  *   : G  N  E  Y  T  V  Q  V  L  V  V  F  S  A  E  H  V  H  T  F  Y  V  Q  *  V  P  K  D  G  S  R  R  C  S  C  *  L  *  L  W  D  G  V  P  I  *  I  L  *  :  L  R  F  G  K  G  I  *  R  G  P  L  *  R  L  *  E  I  D  A  *  H  L  Q  *  G  K  P  L  R  P  *  E  V  L  :  G  L  S  P  F  P  S  A  T  R  S  E  S  T  F  E  E  A  S  R  T  G  *  T  T  Q  R  R  V  P  K  F  G  *  L  *  T  C  Q  R  R  C  Q  C  K  H  K  G  G  R  S  L  T  N  S  V  I  L  S  F  I  E  P  S  V  S  E  F  *  C  L  T  V  H  T  M  S  S  S  C  R  I  S  F  L  R  *  S  R  Q  K  F  C  I  *  S  F  C  E  V  G  *  F  L  P  P  R  L  S  *  N  F  T  M  R  G  C  N  L  V  P  F  C  T  F  I  L  G  L  *  G  V  H  I  G  G  S  *  K  Q  N  K  N  E  K  K  K  *  K  N  V  K  L  P  K  K  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="98223" stop="97895"/>
                    <exon start="97073" stop="97004"/>
                    <exon start="94006" stop="93902"/>
                    <exon start="93824" stop="93484"/>
                    <exon start="93303" stop="93160"/>
                    <exon start="92996" stop="92933"/>
                    <exon start="92113" stop="91968"/>
                    <exon start="91772" stop="91668"/>
                    <exon start="90473" stop="90317"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1458</number_coding_nucleotides>
                  <number_encoded_amino_acids>486</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKKDEVNENKEDGFQVRFSQENRVGELASLEKHAKKVSVFSKAETSRKKSGFRGPTHRVDKGSGDARMVMASNVVEENVDDLSNDFSSTFMLDEEMELENKKDQSSLSGRVEEEDDEMYVNDEAIEKLVIVTRNTRASQVSGTVGKESKPISTELASAINDGLYFYEQELKATRSSHRSNNSNNDPRDDISRSFGTGAALSKSKYADHSSGGKNTEGPGSSNSRRKQNKGFAKPHPIHKQRLFSGNYRNHGVSRNSVGAISESPPSDSVGFFFGSTPPDSHVSRPSKLSASPHSNLASNSPPVGSMPKPFPPFQHPSHKLLQENGFTQQLYKKYHKRCLTDRKKLGIGCSEEMNTLYRFWSYFLRNMFIRSMYNEFQKMAQEDAAANYNYGMECLFRFYSYGLEKEFREDLYDDFERLTLDTYNRGNLYGLEKYWAFHHFRQQRGQRAPLKKLPELDRLLREEFRNLDDFKHARGGASASTKEDGH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="102268" PGL_stop="100210"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="102268" e_stop="101852"/>
            <exon e_start="100695" e_stop="100210"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="0.998"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="102268" e_stop="101852" e_length="417"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="101851" i_stop="100696" i_length="1156"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="100695" e_stop="100210" e_length="486"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102268" stop="101852"/>
              <exon start="100695" stop="100210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U325302" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTCAATATTTTGTCTCTTTGTCTGAAACACTCATCAACCCTAGTAGTATCTCTCTCTCAGCCACCACACACCACTGTAAACCTCCGCCGTTTTCGCCTTTTCTTCATCGGAGTATCACTAATTTGAATTTATATATTTATATATAGAAGTTGCTGACTATGGCGGAAAATGAGAGTACTGGAGATGATCAGAAGGAGGTGATTGAGCCTCCAAAGTCGCCGTGGAAGACTCCGGCGCCGGCGCCGGTGCCGGCGGATAAGGGTTCTGCGTCGTCAGGGGATGATGATTCTGATTCCTGGCCGGCACTTGCTGATGCTCAGCAGATGATTAAGTCTGGTGATTCTAGTTCCGCCGCTAAGTTGCCGTCACTTCCGCCGCAGCAGGAGATTGGCAGCCGCAATGTTGCTTCTGACAAG : GTCCGAGGTGAGCAGCTAAAGTTCCATGGGTCTTCTAGTGCCAAATCTTCAAATAAGTCATCATCCGCAGTTCAACAAAGACCAGTGCATAGGCACAACCAAAATGGTGTGCCATCATTTCCTGTGCCCTTGGCTTACCACCAATCAGGATTCCCTCCTTTTTATCAAAGTATGGTACCTATGCCACATATTCCTCTTCCAGGGTATGCATACCAGCCCCCTCGAGGGTCTTTCTCAGGAGCTGAAGGTCACGTGGCTAGGTCTGATGGTGATGCTGCATCTCAAGCTTTTGTACCCCCTATAAATGGTGGGTTTCGCCCCCCATCACGAGGGGATCCAAATGACCATGATGCCAAATTCTACAGAGGAAGACCTAATACACAAGAGCGAGGTAGCCAGTTTAGTTCAAGCTTGTCTAATCAGCGATCTGTGGGTTCTAAAGATGACATTCAGCTGCAACAAAGTATGGGGCTAAGGCCTTTCCTA</gDNA_template>
            <first_frame> I  Q  Y  F  V  S  L  S  E  T  L  I  N  P  S  S  I  S  L  S  A  T  T  H  H  C  K  P  P  P  F  S  P  F  L  H  R  S  I  T  N  L  N  L  Y  I  Y  I  *  K  L  L  T  M  A  E  N  E  S  T  G  D  D  Q  K  E  V  I  E  P  P  K  S  P  W  K  T  P  A  P  A  P  V  P  A  D  K  G  S  A  S  S  G  D  D  D  S  D  S  W  P  A  L  A  D  A  Q  Q  M  I  K  S  G  D  S  S  S  A  A  K  L  P  S  L  P  P  Q  Q  E  I  G  S  R  N  V  A  S  D  K  :  V  R  G  E  Q  L  K  F  H  G  S  S  S  A  K  S  S  N  K  S  S  S  A  V  Q  Q  R  P  V  H  R  H  N  Q  N  G  V  P  S  F  P  V  P  L  A  Y  H  Q  S  G  F  P  P  F  Y  Q  S  M  V  P  M  P  H  I  P  L  P  G  Y  A  Y  Q  P  P  R  G  S  F  S  G  A  E  G  H  V  A  R  S  D  G  D  A  A  S  Q  A  F  V  P  P  I  N  G  G  F  R  P  P  S  R  G  D  P  N  D  H  D  A  K  F  Y  R  G  R  P  N  T  Q  E  R  G  S  Q  F  S  S  S  L  S  N  Q  R  S  V  G  S  K  D  D  I  Q  L  Q  Q  S  M  G  L  R  P  F  L </first_frame>
            <second_frame>  F  N  I  L  S  L  C  L  K  H  S  S  T  L  V  V  S  L  S  Q  P  P  H  T  T  V  N  L  R  R  F  R  L  F  F  I  G  V  S  L  I  *  I  Y  I  F  I  Y  R  S  C  *  L  W  R  K  M  R  V  L  E  M  I  R  R  R  *  L  S  L  Q  S  R  R  G  R  L  R  R  R  R  R  C  R  R  I  R  V  L  R  R  Q  G  M  M  I  L  I  P  G  R  H  L  L  M  L  S  R  *  L  S  L  V  I  L  V  P  P  L  S  C  R  H  F  R  R  S  R  R  L  A  A  A  M  L  L  L  T  R :   S  E  V  S  S  *  S  S  M  G  L  L  V  P  N  L  Q  I  S  H  H  P  Q  F  N  K  D  Q  C  I  G  T  T  K  M  V  C  H  H  F  L  C  P  W  L  T  T  N  Q  D  S  L  L  F  I  K  V  W  Y  L  C  H  I  F  L  F  Q  G  M  H  T  S  P  L  E  G  L  S  Q  E  L  K  V  T  W  L  G  L  M  V  M  L  H  L  K  L  L  Y  P  L  *  M  V  G  F  A  P  H  H  E  G  I  Q  M  T  M  M  P  N  S  T  E  E  D  L  I  H  K  S  E  V  A  S  L  V  Q  A  C  L  I  S  D  L  W  V  L  K  M  T  F  S  C  N  K  V  W  G  *  G  L  S   </second_frame>
            <third_frame>   S  I  F  C  L  F  V  *  N  T  H  Q  P  *  *  Y  L  S  L  S  H  H  T  P  L  *  T  S  A  V  F  A  F  S  S  S  E  Y  H  *  F  E  F  I  Y  L  Y  I  E  V  A  D  Y  G  G  K  *  E  Y  W  R  *  S  E  G  G  D  *  A  S  K  V  A  V  E  D  S  G  A  G  A  G  A  G  G  *  G  F  C  V  V  R  G  *  *  F  *  F  L  A  G  T  C  *  C  S  A  D  D  *  V  W  *  F  *  F  R  R  *  V  A  V  T  S  A  A  A  G  D  W  Q  P  Q  C  C  F  *  Q   : G  P  R  *  A  A  K  V  P  W  V  F  *  C  Q  I  F  K  *  V  I  I  R  S  S  T  K  T  S  A  *  A  Q  P  K  W  C  A  I  I  S  C  A  L  G  L  P  P  I  R  I  P  S  F  L  S  K  Y  G  T  Y  A  T  Y  S  S  S  R  V  C  I  P  A  P  S  R  V  F  L  R  S  *  R  S  R  G  *  V  *  W  *  C  C  I  S  S  F  C  T  P  Y  K  W  W  V  S  P  P  I  T  R  G  S  K  *  P  *  C  Q  I  L  Q  R  K  T  *  Y  T  R  A  R  *  P  V  *  F  K  L  V  *  S  A  I  C  G  F  *  R  *  H  S  A  A  T  K  Y  G  A  K  A  F  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102121" stop="101852"/>
                    <exon start="100695" stop="100210"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>756</number_coding_nucleotides>
                  <number_encoded_amino_acids>252</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLLTMAENESTGDDQKEVIEPPKSPWKTPAPAPVPADKGSASSGDDDSDSWPALADAQQMIKSGDSSSAAKLPSLPPQQEIGSRNVASDKVRGEQLKFHGSSSAKSSNKSSSAVQQRPVHRHNQNGVPSFPVPLAYHQSGFPPFYQSMVPMPHIPLPGYAYQPPRGSFSGAEGHVARSDGDAASQAFVPPINGGFRPPSRGDPNDHDAKFYRGRPNTQERGSQFSSSLSNQRSVGSKDDIQLQQSMGLRPFL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="107607" PGL_stop="102831"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="107607" e_stop="107583"/>
            <exon e_start="107457" e_stop="107289"/>
            <exon e_start="107204" e_stop="107088"/>
            <exon e_start="107010" e_stop="106903"/>
            <exon e_start="106817" e_stop="106755"/>
            <exon e_start="106577" e_stop="106464"/>
            <exon e_start="106387" e_stop="106222"/>
            <exon e_start="106135" e_stop="106023"/>
            <exon e_start="105919" e_stop="105782"/>
            <exon e_start="105703" e_stop="105573"/>
            <exon e_start="105039" e_stop="104974"/>
            <exon e_start="104597" e_stop="104534"/>
            <exon e_start="104445" e_stop="104334"/>
            <exon e_start="104257" e_stop="104184"/>
            <exon e_start="104091" e_stop="103997"/>
            <exon e_start="103893" e_stop="103862"/>
            <exon e_start="103779" e_stop="103280"/>
            <exon e_start="102861" e_stop="102831"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.746" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.956" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.537" acc_prob="0.849" e_score="1.000"/>
          <exon-intron don_prob="0.742" acc_prob="0.955" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.773" e_score="1.000"/>
          <exon-intron don_prob="0.865" acc_prob="0.942" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.845" e_score="1.000"/>
          <exon-intron don_prob="0.946" acc_prob="0.929" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.890" e_score="1.000"/>
          <exon-intron don_prob="0.970" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.827" acc_prob="0.932" e_score="1.000"/>
          <exon-intron don_prob="0.862" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.742"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="107607" e_stop="107583" e_length="25"/>
          </exon>
          <intron i_serial="1" don_prob="0.746" acc_prob="0.994">
            <gDNA_intron_boundary i_start="107582" i_stop="107458" i_length="125"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="107457" e_stop="107289" e_length="169"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="107288" i_stop="107205" i_length="84"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="107204" e_stop="107088" e_length="117"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.956">
            <gDNA_intron_boundary i_start="107087" i_stop="107011" i_length="77"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="107010" e_stop="106903" e_length="108"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="106902" i_stop="106818" i_length="85"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="106817" e_stop="106755" e_length="63"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="0.995">
            <gDNA_intron_boundary i_start="106754" i_stop="106578" i_length="177"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="106577" e_stop="106464" e_length="114"/>
          </exon>
          <intron i_serial="6" don_prob="0.537" acc_prob="0.849">
            <gDNA_intron_boundary i_start="106463" i_stop="106388" i_length="76"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="106387" e_stop="106222" e_length="166"/>
          </exon>
          <intron i_serial="7" don_prob="0.742" acc_prob="0.955">
            <gDNA_intron_boundary i_start="106221" i_stop="106136" i_length="86"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="106135" e_stop="106023" e_length="113"/>
          </exon>
          <intron i_serial="8" don_prob="0.974" acc_prob="0.773">
            <gDNA_intron_boundary i_start="106022" i_stop="105920" i_length="103"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="105919" e_stop="105782" e_length="138"/>
          </exon>
          <intron i_serial="9" don_prob="0.865" acc_prob="0.942">
            <gDNA_intron_boundary i_start="105781" i_stop="105704" i_length="78"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="105703" e_stop="105573" e_length="131"/>
          </exon>
          <intron i_serial="10" don_prob="0.996" acc_prob="0.994">
            <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="105039" e_stop="104974" e_length="66"/>
          </exon>
          <intron i_serial="11" don_prob="0.980" acc_prob="0.845">
            <gDNA_intron_boundary i_start="104973" i_stop="104598" i_length="376"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="104597" e_stop="104534" e_length="64"/>
          </exon>
          <intron i_serial="12" don_prob="0.946" acc_prob="0.929">
            <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="104445" e_stop="104334" e_length="112"/>
          </exon>
          <intron i_serial="13" don_prob="0.900" acc_prob="0.890">
            <gDNA_intron_boundary i_start="104333" i_stop="104258" i_length="76"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="104257" e_stop="104184" e_length="74"/>
          </exon>
          <intron i_serial="14" don_prob="0.970" acc_prob="0.988">
            <gDNA_intron_boundary i_start="104183" i_stop="104092" i_length="92"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="104091" e_stop="103997" e_length="95"/>
          </exon>
          <intron i_serial="15" don_prob="0.827" acc_prob="0.932">
            <gDNA_intron_boundary i_start="103996" i_stop="103894" i_length="103"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="103893" e_stop="103862" e_length="32"/>
          </exon>
          <intron i_serial="16" don_prob="0.862" acc_prob="0.997">
            <gDNA_intron_boundary i_start="103861" i_stop="103780" i_length="82"/>
          </intron>
          <exon e_serial="17" e_score="1.000">
            <gDNA_exon_boundary e_start="103779" e_stop="103280" e_length="500"/>
          </exon>
          <intron i_serial="17" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="103279" i_stop="102862" i_length="418"/>
          </intron>
          <exon e_serial="18" e_score="0.742">
            <gDNA_exon_boundary e_start="102861" e_stop="102831" e_length="31"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107607" stop="107583"/>
              <exon start="107457" stop="107289"/>
              <exon start="107204" stop="107088"/>
              <exon start="107010" stop="106903"/>
              <exon start="106817" stop="106755"/>
              <exon start="106577" stop="106464"/>
              <exon start="106387" stop="106222"/>
              <exon start="106135" stop="106023"/>
              <exon start="105919" stop="105782"/>
              <exon start="105703" stop="105573"/>
              <exon start="105039" stop="104974"/>
              <exon start="104597" stop="104534"/>
              <exon start="104445" stop="104334"/>
              <exon start="104257" stop="104184"/>
              <exon start="104091" stop="103997"/>
              <exon start="103893" stop="103862"/>
              <exon start="103779" stop="103280"/>
              <exon start="102861" stop="102831"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313966" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCGAAAAACCTTGTCGTGAGCAGAT : GTTTACTCTAAAGCAGAAGAGCAAAGATGAGGATGGTGAAGTGCAAACTTCAGAAGTGACTGTTTATGATTACTTTGTTAATCATCGTAACATAGACTTGCGATATTCTGCCGATTTGCCGTGCCTCAATGTTGGAAAGCCTAAACGTCCTACCTATTTCCCCATTGAG : CTCTGCACTTTGGTCTCATTGCAAAGGTACACAAAAGCCTTGTCCACCTTTCAGAGGGCTTCCTTGGTGGAGAAGTCCAGGCAAAAGCCTCAGGAGAGAATGCAAATTTTGAGCAAT : GCTCTCAAAATCAACAATTATGATGCTGAGCCTCTGCTTCGTTCTTCTGGTGTCTCAATCAGTAGCAACTTCACCCAGGTTGACGGGCGCGTACTGCCTGCTCCTAAG : TTGAAGGCTGGAAATGGAGATGACCTTTTCACCCGGAATGGAAGGTGGAACTTTAATAATAAG : AGATTCTTTGAGCCAGCAAAGGTAGAGCGTTGGGCTGTTGTGAACTTTTCTGCACGCTGTGATGTCCGTGGTCTAGTCAGAGATTTGACAAGACTTGGAGAGACGAAGGGAATT : AGTGTGGAAGCTCCATTTGAAGTGTTTGAAGAGTCTCCACAGCTTAGAAGGGCTCCACCTGTTGTCAGAGTTGACAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGGTGCCCCCAAGTTTCTTCTCTGTCTTCTTCCTGAGAGGAAAAATTGTGACATATATG : GTCCATGGAAGCGAAAAAATCTGGCTGATCATGGTATAGTAACTCAATGCTTGGCTCCTGGAAGAGTTAATGATCAGTATCTCACAAACCTTCTCCTTAAGATCAATGCTAAG : CTTGGTGGTTTAAATTCTATGTTAGCTGCGGAGATTTCTCCTTCCATCCCCATGGTATCTAAGGTCCCCACCATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCATCAATTGCTGCA : GTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAG : GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAG : GGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAG : GCCTGCAATTTTCTAGATGAGAAGTGGTCGCCCAAGTTTGTTATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGTCTGGATCTCCTGATAATGTTCCACCAG : GGACAATTATAGATAACAAAGTTTGTCATCCAAGGAACAATGACTTCTATCTGTGCGCCCATGCTGGAATGATT : GGTACGACTCGACCTACACATTACCATGTGTTGTTGGATGAAGTTGGTTTCTCACCTGATGAACTTCAAGAACTTGTTCATAATCTGTCCTATGT : GTACCAAAGAAGCACTACTGCTATATCCATTG : TGGCTCCGATAAGTTATGCCCATTTGGCCGCCACACAGGTGGGTCAATGGATGAAATTCGAGGATGCATCAGAGACATCGTCAAGCCATGGTGGTCTGACTAATGCTGGTCCAGTTACTGTTCCTCAATTGCCCCGTCTTCAGGAGAACGTTGCTAGCTCCATGTTCTTCTGTTGAGGCCTGTGCACCACCTCCTGTTTTACTCTACGCGGTTAATGTATGCTCTAGACAAATGGTTTCTGTAAATAGCTCTAGTTTGACAGCACTTGGAGTACGAACCTTGTCCTAGTGACCTCCCAAAAACAACTTAGTTATGCGGTACAATACTAGGTCTGTTGCCATATTCAGGTCTCATGCATATTTTTCGCGCTTCTGTTCTCCTGAACAATTTTGCTATGTATCTGTAAAATGCATAGAGATTAACCTGGTGGTGTGACTATGCATCAATTATGCTTTTTTATATGTAAATGGTAATATATAACTTGTTTTTTTCCCGCTTTT : TTAAAAAAAAATTAATATAAAATAAAATCTA</gDNA_template>
            <first_frame> A  K  N  L  V  V  S  R   : C  L  L  *  S  R  R  A  K  M  R  M  V  K  C  K  L  Q  K  *  L  F  M  I  T  L  L  I  I  V  T  *  T  C  D  I  L  P  I  C  R  A  S  M  L  E  S  L  N  V  L  P  I  S  P  L  S :   S  A  L  W  S  H  C  K  G  T  Q  K  P  C  P  P  F  R  G  L  P  W  W  R  S  P  G  K  S  L  R  R  E  C  K  F  *  A  M :   L  S  K  S  T  I  M  M  L  S  L  C  F  V  L  L  V  S  Q  S  V  A  T  S  P  R  L  T  G  A  Y  C  L  L  L  S :   *  R  L  E  M  E  M  T  F  S  P  G  M  E  G  G  T  L  I  I  R :   D  S  L  S  Q  Q  R  *  S  V  G  L  L  *  T  F  L  H  A  V  M  S  V  V  *  S  E  I  *  Q  D  L  E  R  R  R  E  L :   V  W  K  L  H  L  K  C  L  K  S  L  H  S  L  E  G  L  H  L  L  S  E  L  T  K  C  L  K  R  S  S  Q  N  F  L  V  P  P  S  F  F  S  V  F  F  L  R  G  K  I  V  T  Y  M  :  V  H  G  S  E  K  I  W  L  I  M  V  *  *  L  N  A  W  L  L  E  E  L  M  I  S  I  S  Q  T  F  S  L  R  S  M  L  S :   L  V  V  *  I  L  C  *  L  R  R  F  L  L  P  S  P  W  Y  L  R  S  P  P  *  F  L  E  W  T  Y  H  M  A  L  P  A  S  L  M  F  H  Q  L  L  Q :   L  *  V  Q  G  S  G  R  Q  Y  L  V  I  E  L  Q  C  A  L  N  L  L  K  W  R  *  L  I  T  Y  L  K  K  F  Q  T  L  M  M  M  G  L  *   : G  N  F  C  *  I  F  M  *  V  P  G  K  G  S  L  S  T  L  *  Y  S   : G  M  V  S  V  N  L  N  L  I  K  F  *  T  *  N  W  T  S  S  L  R :   P  A  I  F  *  M  R  S  G  R  P  S  L  L  S  L  L  L  R  K  I  I  I  Q  S  F  S  S  L  D  L  L  I  M  F  H  Q  :  G  Q  L  *  I  T  K  F  V  I  Q  G  T  M  T  S  I  C  A  P  M  L  E  *  L :   V  R  L  D  L  H  I  T  M  C  C  W  M  K  L  V  S  H  L  M  N  F  K  N  L  F  I  I  C  P  M   : C  T  K  E  A  L  L  L  Y  P  L  :  W  L  R  *  V  M  P  I  W  P  P  H  R  W  V  N  G  *  N  S  R  M  H  Q  R  H  R  Q  A  M  V  V  *  L  M  L  V  Q  L  L  F  L  N  C  P  V  F  R  R  T  L  L  A  P  C  S  S  V  E  A  C  A  P  P  P  V  L  L  Y  A  V  N  V  C  S  R  Q  M  V  S  V  N  S  S  S  L  T  A  L  G  V  R  T  L  S  *  *  P  P  K  N  N  L  V  M  R  Y  N  T  R  S  V  A  I  F  R  S  H  A  Y  F  S  R  F  C  S  P  E  Q  F  C  Y  V  S  V  K  C  I  E  I  N  L  V  V  *  L  C  I  N  Y  A  F  L  Y  V  N  G  N  I  *  L  V  F  F  P  L  F :   *  K  K  I  N  I  K  *  N  L </first_frame>
            <second_frame>  R  K  T  L  S  *  A  D  :  V  Y  S  K  A  E  E  Q  R  *  G  W  *  S  A  N  F  R  S  D  C  L  *  L  L  C  *  S  S  *  H  R  L  A  I  F  C  R  F  A  V  P  Q  C  W  K  A  *  T  S  Y  L  F  P  H  *   : A  L  H  F  G  L  I  A  K  V  H  K  S  L  V  H  L  S  E  G  F  L  G  G  E  V  Q  A  K  A  S  G  E  N  A  N  F  E  Q   : C  S  Q  N  Q  Q  L  *  C  *  A  S  A  S  F  F  W  C  L  N  Q  *  Q  L  H  P  G  *  R  A  R  T  A  C  S  *   : V  E  G  W  K  W  R  *  P  F  H  P  E  W  K  V  E  L  *  *  *   : E  I  L  *  A  S  K  G  R  A  L  G  C  C  E  L  F  C  T  L  *  C  P  W  S  S  Q  R  F  D  K  T  W  R  D  E  G  N   : *  C  G  S  S  I  *  S  V  *  R  V  S  T  A  *  K  G  S  T  C  C  Q  S  *  Q  N  V  *  R  D  P  V  K  T  S  W  C  P  Q  V  S  S  L  S  S  S  *  E  E  K  L  *  H  I  W :   S  M  E  A  K  K  S  G  *  S  W  Y  S  N  S  M  L  G  S  W  K  S  *  *  S  V  S  H  K  P  S  P  *  D  Q  C  *   : A  W  W  F  K  F  Y  V  S  C  G  D  F  S  F  H  P  H  G  I  *  G  P  H  H  D  S  W  N  G  R  I  T  W  L  S  R  P  V  *  C  S  I  N  C  C   : S  C  E  F  K  A  V  A  V  N  I  S  L  *  S  F  S  A  H  S  I  S  *  S  G  D  D  *  *  H  I  *  K  S  F  R  H  *  *  *  W  D  Y  E  :  G  T  F  A  R  F  L  C  E  F  R  E  K  E  A  *  A  H  Y  S  I  Q  :  G  W  C  Q  *  I  S  I  *  S  S  S  K  H  R  T  G  P  A  H  *   : G  L  Q  F  S  R  *  E  V  V  A  Q  V  C  Y  H  C  C  S  E  K  S  S  Y  K  V  F  P  V  W  I  S  *  *  C  S  T  R :   D  N  Y  R  *  Q  S  L  S  S  K  E  Q  *  L  L  S  V  R  P  C  W  N  D   : W  Y  D  S  T  Y  T  L  P  C  V  V  G  *  S  W  F  L  T  *  *  T  S  R  T  C  S  *  S  V  L  C  :  V  P  K  K  H  Y  C  Y  I  H  C :   G  S  D  K  L  C  P  F  G  R  H  T  G  G  S  M  D  E  I  R  G  C  I  R  D  I  V  K  P  W  W  S  D  *  C  W  S  S  Y  C  S  S  I  A  P  S  S  G  E  R  C  *  L  H  V  L  L  L  R  P  V  H  H  L  L  F  Y  S  T  R  L  M  Y  A  L  D  K  W  F  L  *  I  A  L  V  *  Q  H  L  E  Y  E  P  C  P  S  D  L  P  K  T  T  *  L  C  G  T  I  L  G  L  L  P  Y  S  G  L  M  H  I  F  R  A  S  V  L  L  N  N  F  A  M  Y  L  *  N  A  *  R  L  T  W  W  C  D  Y  A  S  I  M  L  F  Y  M  *  M  V  I  Y  N  L  F  F  S  R  F   : F  K  K  K  L  I  *  N  K  I   </second_frame>
            <third_frame>   E  K  P  C  R  E  Q  M :   F  T  L  K  Q  K  S  K  D  E  D  G  E  V  Q  T  S  E  V  T  V  Y  D  Y  F  V  N  H  R  N  I  D  L  R  Y  S  A  D  L  P  C  L  N  V  G  K  P  K  R  P  T  Y  F  P  I  E  :  L  C  T  L  V  S  L  Q  R  Y  T  K  A  L  S  T  F  Q  R  A  S  L  V  E  K  S  R  Q  K  P  Q  E  R  M  Q  I  L  S  N  :  A  L  K  I  N  N  Y  D  A  E  P  L  L  R  S  S  G  V  S  I  S  S  N  F  T  Q  V  D  G  R  V  L  P  A  P  K  :  L  K  A  G  N  G  D  D  L  F  T  R  N  G  R  W  N  F  N  N  K  :  R  F  F  E  P  A  K  V  E  R  W  A  V  V  N  F  S  A  R  C  D  V  R  G  L  V  R  D  L  T  R  L  G  E  T  K  G  I  :  S  V  E  A  P  F  E  V  F  E  E  S  P  Q  L  R  R  A  P  P  V  V  R  V  D  K  M  F  E  E  I  Q  S  K  L  P  G  A  P  K  F  L  L  C  L  L  P  E  R  K  N  C  D  I  Y   : G  P  W  K  R  K  N  L  A  D  H  G  I  V  T  Q  C  L  A  P  G  R  V  N  D  Q  Y  L  T  N  L  L  L  K  I  N  A  K  :  L  G  G  L  N  S  M  L  A  A  E  I  S  P  S  I  P  M  V  S  K  V  P  T  M  I  L  G  M  D  V  S  H  G  S  P  G  Q  S  D  V  P  S  I  A  A  :  V  V  S  S  R  Q  W  P  S  I  S  R  Y  R  A  S  V  R  T  Q  S  P  K  V  E  M  I  D  N  I  F  K  K  V  S  D  T  D  D  D  G  I  M  R :   E  L  L  L  D  F  Y  V  S  S  G  K  R  K  P  E  H  I  I  V  F  R :   D  G  V  S  E  S  Q  F  N  Q  V  L  N  I  E  L  D  Q  L  I  E  :  A  C  N  F  L  D  E  K  W  S  P  K  F  V  I  I  V  A  Q  K  N  H  H  T  K  F  F  Q  S  G  S  P  D  N  V  P  P   : G  T  I  I  D  N  K  V  C  H  P  R  N  N  D  F  Y  L  C  A  H  A  G  M  I  :  G  T  T  R  P  T  H  Y  H  V  L  L  D  E  V  G  F  S  P  D  E  L  Q  E  L  V  H  N  L  S  Y  V :   Y  Q  R  S  T  T  A  I  S  I   : V  A  P  I  S  Y  A  H  L  A  A  T  Q  V  G  Q  W  M  K  F  E  D  A  S  E  T  S  S  S  H  G  G  L  T  N  A  G  P  V  T  V  P  Q  L  P  R  L  Q  E  N  V  A  S  S  M  F  F  C  *  G  L  C  T  T  S  C  F  T  L  R  G  *  C  M  L  *  T  N  G  F  C  K  *  L  *  F  D  S  T  W  S  T  N  L  V  L  V  T  S  Q  K  Q  L  S  Y  A  V  Q  Y  *  V  C  C  H  I  Q  V  S  C  I  F  F  A  L  L  F  S  *  T  I  L  L  C  I  C  K  M  H  R  D  *  P  G  G  V  T  M  H  Q  L  C  F  F  I  C  K  W  *  Y  I  T  C  F  F  P  A  F  :  L  K  K  N  *  Y  K  I  K  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="107605" stop="107583"/>
                    <exon start="107457" stop="107289"/>
                    <exon start="107204" stop="107088"/>
                    <exon start="107010" stop="106903"/>
                    <exon start="106817" stop="106755"/>
                    <exon start="106577" stop="106464"/>
                    <exon start="106387" stop="106222"/>
                    <exon start="106135" stop="106023"/>
                    <exon start="105919" stop="105782"/>
                    <exon start="105703" stop="105573"/>
                    <exon start="105039" stop="104974"/>
                    <exon start="104597" stop="104534"/>
                    <exon start="104445" stop="104334"/>
                    <exon start="104257" stop="104184"/>
                    <exon start="104091" stop="103997"/>
                    <exon start="103893" stop="103862"/>
                    <exon start="103779" stop="103604"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1758</number_coding_nucleotides>
                  <number_encoded_amino_acids>586</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKPCREQMFTLKQKSKDEDGEVQTSEVTVYDYFVNHRNIDLRYSADLPCLNVGKPKRPTYFPIELCTLVSLQRYTKALSTFQRASLVEKSRQKPQERMQILSNALKINNYDAEPLLRSSGVSISSNFTQVDGRVLPAPKLKAGNGDDLFTRNGRWNFNNKRFFEPAKVERWAVVNFSARCDVRGLVRDLTRLGETKGISVEAPFEVFEESPQLRRAPPVVRVDKMFEEIQSKLPGAPKFLLCLLPERKNCDIYGPWKRKNLADHGIVTQCLAPGRVNDQYLTNLLLKINAKLGGLNSMLAAEISPSIPMVSKVPTMILGMDVSHGSPGQSDVPSIAAVVSSRQWPSISRYRASVRTQSPKVEMIDNIFKKVSDTDDDGIMRELLLDFYVSSGKRKPEHIIVFRDGVSESQFNQVLNIELDQLIEACNFLDEKWSPKFVIIVAQKNHHTKFFQSGSPDNVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVGFSPDELQELVHNLSYVYQRSTTAISIVAPISYAHLAATQVGQWMKFEDASETSSSHGGLTNAGPVTVPQLPRLQENVASSMFFC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="105753" e_stop="105573"/>
            <exon e_start="105039" e_stop="104534"/>
            <exon e_start="104445" e_stop="104440"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.994" e_score="0.989"/>
          <exon-intron don_prob="0.946" acc_prob="0.929" e_score="0.998"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="105753" e_stop="105573" e_length="181"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.994">
            <gDNA_intron_boundary i_start="105572" i_stop="105040" i_length="533"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="105039" e_stop="104534" e_length="506"/>
          </exon>
          <intron i_serial="2" don_prob="0.946" acc_prob="0.929">
            <gDNA_intron_boundary i_start="104533" i_stop="104446" i_length="88"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="104445" e_stop="104440" e_length="6"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105753" stop="105573"/>
              <exon start="105039" stop="104534"/>
              <exon start="104445" stop="104440"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313965" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTATACCCAATTTTTCAAAGAATTTCATTTTATACGATTGCTTTGTCAGGTTGTGAGTTCAAGGCAGTGGCCGTCAATATCTCGTTATAGAGCTTCAGTGCGCACTCAATCTCCTAAAGTGGAGATGATTGATAACATATTTAAAAAAGTTTCAGACACTGATGATGATGGGATTATGAG : GGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGGAAGCCTGAGCACATTATAGTATTCAGGTGATCTAACCCAGCCTGTTCACCATTTTGCTTTCAGCAAATTATATACATTCTAAGTGCTATTGCTCTTTTATTGACACTACACTTGTGATGAATGTCTAAATCTTCAGAAATTTTTATTGAGCATGACATTGGTGAGTTTTTATGGTTCTACCTCATTTTCTGCCATTTTTATCCCGTTTATCTATTGTTTTAGAGGATTCATGTAGCTGACCTAACTCTTGGGCATGAGGAGTAGCTCTTGATATTTCTCTTGTTCCATCGTTTGTTGTTATTACCACTACCGTGTGTTCCACCTGCCTAACATTGTCACGTAGCAGTGAACTTTGTACACTTCTTTGACGGTTTTGCTATTGGCCCCTTTTGAAAATGTCAGGGATGGTGTCAGTGAATCTCAATTTAATCAAGTTCTAAACATAGAACTGGACCAGCTCATTGAG : GCCTGC</gDNA_template>
            <first_frame> F  I  P  N  F  S  K  N  F  I  L  Y  D  C  F  V  R  L  *  V  Q  G  S  G  R  Q  Y  L  V  I  E  L  Q  C  A  L  N  L  L  K  W  R  *  L  I  T  Y  L  K  K  F  Q  T  L  M  M  M  G  L  *   : G  N  F  C  *  I  F  M  *  V  P  G  K  G  S  L  S  T  L  *  Y  S  G  D  L  T  Q  P  V  H  H  F  A  F  S  K  L  Y  T  F  *  V  L  L  L  F  Y  *  H  Y  T  C  D  E  C  L  N  L  Q  K  F  L  L  S  M  T  L  V  S  F  Y  G  S  T  S  F  S  A  I  F  I  P  F  I  Y  C  F  R  G  F  M  *  L  T  *  L  L  G  M  R  S  S  S  *  Y  F  S  C  S  I  V  C  C  Y  Y  H  Y  R  V  F  H  L  P  N  I  V  T  *  Q  *  T  L  Y  T  S  L  T  V  L  L  L  A  P  F  E  N  V  R  D  G  V  S  E  S  Q  F  N  Q  V  L  N  I  E  L  D  Q  L  I  E  :  A  C </first_frame>
            <second_frame>  L  Y  P  I  F  Q  R  I  S  F  Y  T  I  A  L  S  G  C  E  F  K  A  V  A  V  N  I  S  L  *  S  F  S  A  H  S  I  S  *  S  G  D  D  *  *  H  I  *  K  S  F  R  H  *  *  *  W  D  Y  E  :  G  T  F  A  R  F  L  C  E  F  R  E  K  E  A  *  A  H  Y  S  I  Q  V  I  *  P  S  L  F  T  I  L  L  S  A  N  Y  I  H  S  K  C  Y  C  S  F  I  D  T  T  L  V  M  N  V  *  I  F  R  N  F  Y  *  A  *  H  W  *  V  F  M  V  L  P  H  F  L  P  F  L  S  R  L  S  I  V  L  E  D  S  C  S  *  P  N  S  W  A  *  G  V  A  L  D  I  S  L  V  P  S  F  V  V  I  T  T  T  V  C  S  T  C  L  T  L  S  R  S  S  E  L  C  T  L  L  *  R  F  C  Y  W  P  L  L  K  M  S  G  M  V  S  V  N  L  N  L  I  K  F  *  T  *  N  W  T  S  S  L  R :   P   </second_frame>
            <third_frame>   Y  T  Q  F  F  K  E  F  H  F  I  R  L  L  C  Q  V  V  S  S  R  Q  W  P  S  I  S  R  Y  R  A  S  V  R  T  Q  S  P  K  V  E  M  I  D  N  I  F  K  K  V  S  D  T  D  D  D  G  I  M  R :   E  L  L  L  D  F  Y  V  S  S  G  K  R  K  P  E  H  I  I  V  F  R  *  S  N  P  A  C  S  P  F  C  F  Q  Q  I  I  Y  I  L  S  A  I  A  L  L  L  T  L  H  L  *  *  M  S  K  S  S  E  I  F  I  E  H  D  I  G  E  F  L  W  F  Y  L  I  F  C  H  F  Y  P  V  Y  L  L  F  *  R  I  H  V  A  D  L  T  L  G  H  E  E  *  L  L  I  F  L  L  F  H  R  L  L  L  L  P  L  P  C  V  P  P  A  *  H  C  H  V  A  V  N  F  V  H  F  F  D  G  F  A  I  G  P  F  *  K  C  Q  G  W  C  Q  *  I  S  I  *  S  S  S  K  H  R  T  G  P  A  H  *   : G  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="105751" stop="105573"/>
                    <exon start="105039" stop="104970"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YTQFFKEFHFIRLLCQVVSSRQWPSISRYRASVRTQSPKVEMIDNIFKKVSDTDDDGIMRELLLDFYVSSGKRKPEHIIVFR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="109104" PGL_stop="107823"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="109104" e_stop="108865"/>
            <exon e_start="108766" e_stop="108561"/>
            <exon e_start="108479" e_stop="108243"/>
            <exon e_start="108068" e_stop="107932"/>
            <exon e_start="107855" e_stop="107823"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.980" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.113" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.942" acc_prob="0.441" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.979" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="109104" e_stop="108865" e_length="240"/>
          </exon>
          <intron i_serial="1" don_prob="0.980" acc_prob="0.993">
            <gDNA_intron_boundary i_start="108864" i_stop="108767" i_length="98"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="108766" e_stop="108561" e_length="206"/>
          </exon>
          <intron i_serial="2" don_prob="0.113" acc_prob="1.000">
            <gDNA_intron_boundary i_start="108560" i_stop="108480" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="108479" e_stop="108243" e_length="237"/>
          </exon>
          <intron i_serial="3" don_prob="0.942" acc_prob="0.441">
            <gDNA_intron_boundary i_start="108242" i_stop="108069" i_length="174"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="108068" e_stop="107932" e_length="137"/>
          </exon>
          <intron i_serial="4" don_prob="0.990" acc_prob="0.979">
            <gDNA_intron_boundary i_start="107931" i_stop="107856" i_length="76"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="107855" e_stop="107823" e_length="33"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109104" stop="108865"/>
              <exon start="108766" stop="108561"/>
              <exon start="108479" stop="108243"/>
              <exon start="108068" stop="107932"/>
              <exon start="107855" stop="107823"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U322065" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGATTGTGGTAATGGCTGAAGAAGAGAATGGTGGATCCACAGAGGCTCTGCCTCCTCCTCCCCCTGTTCCACTTAATTTCTCTCCTGCACAAGCTGAACCAGAGCCAGTGAAGAAGAAGGTTTTACGTGTTCCCATGGCAAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCACTTTAAAGTGAACGTGTCTAATGTTGATGGACACTTCTTTCATTACAGT : GTTGCCTTATTTTATGAGGATGGTCGACCTGTCGAGGGAAAAGGCATTGGCAGAAAAGTTCTGGATAGAGTGCATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATATGATGGGGAGAAGAGTTTGTTCACCATCGGTTCACTACCTAGAAATAAACTAGAGTTCACAGTTGTACTAGATGACATAACATCTAATCG : GAACAACGGTACCAATGGCAACTCTAGCCCTGGCAGACATGGAAGCCCTCCTAATGAAACTGATAGGAAAAGATTAAGGCGGCCATACCAATCTAAAACTTATAAGGTGGAGATTAGCTTTGCTGCCAAGATTCCAATGCAGGCGATTGCAAATGCTTTGCGAGGTCAAGAGTCTGAGAACTCTCAAGAAGCCTTGCGAGTTTTGGATATAATTTTAAGGCAGCATGCTGCAAAACA : GGGTTGTTTACTTGTTCGTCAATCCTTTTTCCATAATGATCCTAAGAACTTTGCTGATGTTGGCGGTGGTGTTCTGGGCTGCCGAGGGTTCCATTCAAGTTTTCGTACCACCCAGTCGGGATTGTCATTGAACATTG : ACGTGTCTACCACTATGATAATCCAACCTGGGC</gDNA_template>
            <first_frame> K  I  V  V  M  A  E  E  E  N  G  G  S  T  E  A  L  P  P  P  P  P  V  P  L  N  F  S  P  A  Q  A  E  P  E  P  V  K  K  K  V  L  R  V  P  M  A  R  R  G  L  G  S  K  G  Q  K  I  P  I  L  T  N  H  F  K  V  N  V  S  N  V  D  G  H  F  F  H  Y  S  :  V  A  L  F  Y  E  D  G  R  P  V  E  G  K  G  I  G  R  K  V  L  D  R  V  H  E  T  Y  D  T  E  L  A  G  K  D  F  A  Y  D  G  E  K  S  L  F  T  I  G  S  L  P  R  N  K  L  E  F  T  V  V  L  D  D  I  T  S  N  R :   N  N  G  T  N  G  N  S  S  P  G  R  H  G  S  P  P  N  E  T  D  R  K  R  L  R  R  P  Y  Q  S  K  T  Y  K  V  E  I  S  F  A  A  K  I  P  M  Q  A  I  A  N  A  L  R  G  Q  E  S  E  N  S  Q  E  A  L  R  V  L  D  I  I  L  R  Q  H  A  A  K  Q :   G  C  L  L  V  R  Q  S  F  F  H  N  D  P  K  N  F  A  D  V  G  G  G  V  L  G  C  R  G  F  H  S  S  F  R  T  T  Q  S  G  L  S  L  N  I   : D  V  S  T  T  M  I  I  Q  P  G  </first_frame>
            <second_frame>  R  L  W  *  W  L  K  K  R  M  V  D  P  Q  R  L  C  L  L  L  P  L  F  H  L  I  S  L  L  H  K  L  N  Q  S  Q  *  R  R  R  F  Y  V  F  P  W  Q  G  V  A  L  E  A  R  D  K  R  F  R  S  L  P  I  T  L  K  *  T  C  L  M  L  M  D  T  S  F  I  T  V :   L  P  Y  F  M  R  M  V  D  L  S  R  E  K  A  L  A  E  K  F  W  I  E  C  M  K  H  M  I  Q  N  W  L  G  R  I  L  H  M  M  G  R  R  V  C  S  P  S  V  H  Y  L  E  I  N  *  S  S  Q  L  Y  *  M  T  *  H  L  I   : G  T  T  V  P  M  A  T  L  A  L  A  D  M  E  A  L  L  M  K  L  I  G  K  D  *  G  G  H  T  N  L  K  L  I  R  W  R  L  A  L  L  P  R  F  Q  C  R  R  L  Q  M  L  C  E  V  K  S  L  R  T  L  K  K  P  C  E  F  W  I  *  F  *  G  S  M  L  Q  N   : R  V  V  Y  L  F  V  N  P  F  S  I  M  I  L  R  T  L  L  M  L  A  V  V  F  W  A  A  E  G  S  I  Q  V  F  V  P  P  S  R  D  C  H  *  T  L  :  T  C  L  P  L  *  *  S  N  L  G </second_frame>
            <third_frame>   D  C  G  N  G  *  R  R  E  W  W  I  H  R  G  S  A  S  S  S  P  C  S  T  *  F  L  S  C  T  S  *  T  R  A  S  E  E  E  G  F  T  C  S  H  G  K  A  W  P  W  K  Q  G  T  K  D  S  D  P  Y  Q  S  L  *  S  E  R  V  *  C  *  W  T  L  L  S  L  Q   : C  C  L  I  L  *  G  W  S  T  C  R  G  K  R  H  W  Q  K  S  S  G  *  S  A  *  N  I  *  Y  R  I  G  W  E  G  F  C  I  *  W  G  E  E  F  V  H  H  R  F  T  T  *  K  *  T  R  V  H  S  C  T  R  *  H  N  I  *  S  :  E  Q  R  Y  Q  W  Q  L  *  P  W  Q  T  W  K  P  S  *  *  N  *  *  E  K  I  K  A  A  I  P  I  *  N  L  *  G  G  D  *  L  C  C  Q  D  S  N  A  G  D  C  K  C  F  A  R  S  R  V  *  E  L  S  R  S  L  A  S  F  G  Y  N  F  K  A  A  C  C  K  T  :  G  L  F  T  C  S  S  I  L  F  P  *  *  S  *  E  L  C  *  C  W  R  W  C  S  G  L  P  R  V  P  F  K  F  S  Y  H  P  V  G  I  V  I  E  H  * :   R  V  Y  H  Y  D  N  P  T  W   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="109104" stop="108865"/>
                    <exon start="108766" stop="108561"/>
                    <exon start="108479" stop="108243"/>
                    <exon start="108068" stop="107932"/>
                    <exon start="107855" stop="107824"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>852</number_coding_nucleotides>
                  <number_encoded_amino_acids>284</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KIVVMAEEENGGSTEALPPPPPVPLNFSPAQAEPEPVKKKVLRVPMARRGLGSKGQKIPILTNHFKVNVSNVDGHFFHYSVALFYEDGRPVEGKGIGRKVLDRVHETYDTELAGKDFAYDGEKSLFTIGSLPRNKLEFTVVLDDITSNRNNGTNGNSSPGRHGSPPNETDRKRLRRPYQSKTYKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="110388" PGL_stop="109527"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="110388" e_stop="110233"/>
            <exon e_start="110108" e_stop="109981"/>
            <exon e_start="109590" e_stop="109527"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.854" acc_prob="0.997" e_score="0.936"/>
          <exon-intron don_prob="0.986" acc_prob="0.944" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.936">
            <gDNA_exon_boundary e_start="110388" e_stop="110233" e_length="156"/>
          </exon>
          <intron i_serial="1" don_prob="0.854" acc_prob="0.997">
            <gDNA_intron_boundary i_start="110232" i_stop="110109" i_length="124"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="110108" e_stop="109981" e_length="128"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.944">
            <gDNA_intron_boundary i_start="109980" i_stop="109591" i_length="390"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="109590" e_stop="109527" e_length="64"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110388" stop="110233"/>
              <exon start="110108" stop="109981"/>
              <exon start="109590" stop="109527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U341960" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTATGGTTTTGTTTTAACCAAAAATGTCTGTCTCTCTTCTGAGAAACACTGCGTTTCTTCCCTCAATCTCACTTGGAATTCAAACCATTTCCTCAGCCAAAATGCGAAGAACACGAAGTTCCCTCAACCAAGAAACCCCTTCTCAGAAAAACCCAG : GTTGTGATGGCACAGGTGGAAGCTCCGTTCCTGAACTCCGTGTTTTCATCCGAAGAAAGAGAGTTAAAAAGACTGTGGAAGTCATAGCCAAAGAGGTCAAGGAAGAATCTTCTGGCAAAAAAGTTATG : CTTGTTAGACTGCCTGATATAGAGGATTTTTCCTATTCGAAGGACATTACACATCCCCAGTCAA</gDNA_template>
            <first_frame> L  W  F  C  F  N  Q  K  C  L  S  L  F  *  E  T  L  R  F  F  P  Q  S  H  L  E  F  K  P  F  P  Q  P  K  C  E  E  H  E  V  P  S  T  K  K  P  L  L  R  K  T  Q  :  V  V  M  A  Q  V  E  A  P  F  L  N  S  V  F  S  S  E  E  R  E  L  K  R  L  W  K  S  *  P  K  R  S  R  K  N  L  L  A  K  K  L  C :   L  L  D  C  L  I  *  R  I  F  P  I  R  R  T  L  H  I  P  S  Q </first_frame>
            <second_frame>  Y  G  F  V  L  T  K  N  V  C  L  S  S  E  K  H  C  V  S  S  L  N  L  T  W  N  S  N  H  F  L  S  Q  N  A  K  N  T  K  F  P  Q  P  R  N  P  F  S  E  K  P  R :   L  *  W  H  R  W  K  L  R  S  *  T  P  C  F  H  P  K  K  E  S  *  K  D  C  G  S  H  S  Q  R  G  Q  G  R  I  F  W  Q  K  S  Y   : A  C  *  T  A  *  Y  R  G  F  F  L  F  E  G  H  Y  T  S  P  V   </second_frame>
            <third_frame>   M  V  L  F  *  P  K  M  S  V  S  L  L  R  N  T  A  F  L  P  S  I  S  L  G  I  Q  T  I  S  S  A  K  M  R  R  T  R  S  S  L  N  Q  E  T  P  S  Q  K  N  P   : G  C  D  G  T  G  G  S  S  V  P  E  L  R  V  F  I  R  R  K  R  V  K  K  T  V  E  V  I  A  K  E  V  K  E  E  S  S  G  K  K  V  M  :  L  V  R  L  P  D  I  E  D  F  S  Y  S  K  D  I  T  H  P  Q  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="110371" stop="110233"/>
                    <exon start="110108" stop="109981"/>
                    <exon start="109590" stop="109528"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>330</number_coding_nucleotides>
                  <number_encoded_amino_acids>110</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PKMSVSLLRNTAFLPSISLGIQTISSAKMRRTRSSLNQETPSQKNPGCDGTGGSSVPELRVFIRRKRVKKTVEVIAKEVKEESSGKKVMLVRLPDIEDFSYSKDITHPQS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="113638" PGL_stop="117294"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="113638" e_stop="113715"/>
            <exon e_start="115315" e_stop="115440"/>
            <exon e_start="116211" e_stop="116338"/>
            <exon e_start="116861" e_stop="117294"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.968" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.838" acc_prob="0.849" e_score="1.000"/>
          <exon-intron don_prob="0.930" acc_prob="0.999" e_score="0.992"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="113638" e_stop="113715" e_length="78"/>
          </exon>
          <intron i_serial="1" don_prob="0.968" acc_prob="0.990">
            <gDNA_intron_boundary i_start="113716" i_stop="115314" i_length="1599"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="115315" e_stop="115440" e_length="126"/>
          </exon>
          <intron i_serial="2" don_prob="0.838" acc_prob="0.849">
            <gDNA_intron_boundary i_start="115441" i_stop="116210" i_length="770"/>
          </intron>
          <exon e_serial="3" e_score="0.992">
            <gDNA_exon_boundary e_start="116211" e_stop="116338" e_length="128"/>
          </exon>
          <intron i_serial="3" don_prob="0.930" acc_prob="0.999">
            <gDNA_intron_boundary i_start="116339" i_stop="116860" i_length="522"/>
          </intron>
          <exon e_serial="4" e_score="0.986">
            <gDNA_exon_boundary e_start="116861" e_stop="117294" e_length="434"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113638" stop="113715"/>
              <exon start="115315" stop="115440"/>
              <exon start="116211" stop="116338"/>
              <exon start="116861" stop="117294"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U325350" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGATTTATTGGATGCGTTTGCTGACAGAGTCTCTAAACCTCGCCTCTTTATGACAGACAAGATGCAAATTGCTCTTG : CTGGGGGTTTGGGACATGGTGTGGCTCATGCTGTGTTTTTCTGCCTTGGCCTTTTGACACCTGCATTTGGACCAGCGACATACTATGTAGAGAAATGCTCAAAGATACCCTTTTTTCTTGTTTCTG : CTATTATAGCCCTTGCCTTTGCTACCATCCACACTTTCTCCATGGTTATTGCATTCAGTGGATATGAAGAAGGAAACAAAGTGGACCAGTGTTTCGCTCCTGTTGTTCACTTAATTGCTGGCATGTTG : ACACTGACGAATCTTGCATTTGGAGGCTGCATGATTGGCATTCCACTCCTCTATTGTGTAGCAATCGTGACCTTGGTACATTGCGGAAAGATGGCATGGAGGAGATTGATAGAAAGCCGAAACAGGGAGGGGAACTTCAGCAATAGCCAATAAGCAAGGATAATAACCTTTTTTGTATTACTGAGAAGTGTAAGATTAGTAATTGCCAGATATATCTAATGCTTGGAGCATTTGCCAAGGGTGACTCAAAGAAGAGACTAGTAAATCTTTTGTTTTAGGCCTCCAAAAATATTTCATAGTCAACTTTATATTGGCCAAATAAATATTCGGGCCACTCAAACTTTACATGAATTTTCGTTGTAACACCTAACATTTGCCTTGTACCTATTGAACACCTAATATTACAAGAATTTATGTCTATTCAATAATCGTAC</gDNA_template>
            <first_frame> R  I  Y  W  M  R  L  L  T  E  S  L  N  L  A  S  L  *  Q  T  R  C  K  L  L  L  :  L  G  V  W  D  M  V  W  L  M  L  C  F  S  A  L  A  F  *  H  L  H  L  D  Q  R  H  T  M  *  R  N  A  Q  R  Y  P  F  F  L  F  L  :  L  L  *  P  L  P  L  L  P  S  T  L  S  P  W  L  L  H  S  V  D  M  K  K  E  T  K  W  T  S  V  S  L  L  L  F  T  *  L  L  A  C  * :   H  *  R  I  L  H  L  E  A  A  *  L  A  F  H  S  S  I  V  *  Q  S  *  P  W  Y  I  A  E  R  W  H  G  G  D  *  *  K  A  E  T  G  R  G  T  S  A  I  A  N  K  Q  G  *  *  P  F  L  Y  Y  *  E  V  *  D  *  *  L  P  D  I  S  N  A  W  S  I  C  Q  G  *  L  K  E  E  T  S  K  S  F  V  L  G  L  Q  K  Y  F  I  V  N  F  I  L  A  K  *  I  F  G  P  L  K  L  Y  M  N  F  R  C  N  T  *  H  L  P  C  T  Y  *  T  P  N  I  T  R  I  Y  V  Y  S  I  I  V  </first_frame>
            <second_frame>  G  F  I  G  C  V  C  *  Q  S  L  *  T  S  P  L  Y  D  R  Q  D  A  N  C  S  C :   W  G  F  G  T  W  C  G  S  C  C  V  F  L  P  W  P  F  D  T  C  I  W  T  S  D  I  L  C  R  E  M  L  K  D  T  L  F  S  C  F  C :   Y  Y  S  P  C  L  C  Y  H  P  H  F  L  H  G  Y  C  I  Q  W  I  *  R  R  K  Q  S  G  P  V  F  R  S  C  C  S  L  N  C  W  H  V   : D  T  D  E  S  C  I  W  R  L  H  D  W  H  S  T  P  L  L  C  S  N  R  D  L  G  T  L  R  K  D  G  M  E  E  I  D  R  K  P  K  Q  G  G  E  L  Q  Q  *  P  I  S  K  D  N  N  L  F  C  I  T  E  K  C  K  I  S  N  C  Q  I  Y  L  M  L  G  A  F  A  K  G  D  S  K  K  R  L  V  N  L  L  F  *  A  S  K  N  I  S  *  S  T  L  Y  W  P  N  K  Y  S  G  H  S  N  F  T  *  I  F  V  V  T  P  N  I  C  L  V  P  I  E  H  L  I  L  Q  E  F  M  S  I  Q  *  S  Y </second_frame>
            <third_frame>   D  L  L  D  A  F  A  D  R  V  S  K  P  R  L  F  M  T  D  K  M  Q  I  A  L   : A  G  G  L  G  H  G  V  A  H  A  V  F  F  C  L  G  L  L  T  P  A  F  G  P  A  T  Y  Y  V  E  K  C  S  K  I  P  F  F  L  V  S   : A  I  I  A  L  A  F  A  T  I  H  T  F  S  M  V  I  A  F  S  G  Y  E  E  G  N  K  V  D  Q  C  F  A  P  V  V  H  L  I  A  G  M  L  :  T  L  T  N  L  A  F  G  G  C  M  I  G  I  P  L  L  Y  C  V  A  I  V  T  L  V  H  C  G  K  M  A  W  R  R  L  I  E  S  R  N  R  E  G  N  F  S  N  S  Q  *  A  R  I  I  T  F  F  V  L  L  R  S  V  R  L  V  I  A  R  Y  I  *  C  L  E  H  L  P  R  V  T  Q  R  R  D  *  *  I  F  C  F  R  P  P  K  I  F  H  S  Q  L  Y  I  G  Q  I  N  I  R  A  T  Q  T  L  H  E  F  S  L  *  H  L  T  F  A  L  Y  L  L  N  T  *  Y  Y  K  N  L  C  L  F  N  N  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="113640" stop="113715"/>
                    <exon start="115315" stop="115440"/>
                    <exon start="116211" stop="116338"/>
                    <exon start="116861" stop="117013"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>480</number_coding_nucleotides>
                  <number_encoded_amino_acids>160</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLLDAFADRVSKPRLFMTDKMQIALAGGLGHGVAHAVFFCLGLLTPAFGPATYYVEKCSKIPFFLVSAIIALAFATIHTFSMVIAFSGYEEGNKVDQCFAPVVHLIAGMLTLTNLAFGGCMIGIPLLYCVAIVTLVHCGKMAWRRLIESRNREGNFSNSQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="+" PGL_start="124540" PGL_stop="124960"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="124540" e_stop="124960"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="124540" e_stop="124960" e_length="421"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="124540" stop="124960"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334290" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACTTCTTGAATCAAGAAGCTAGTCTAAAAGAATCTTATGGCATCTTCATTGTCAGGTGGTGTGTGGTACACCGACATCAATACTCAGTGAAAATTAACAAGTATATTATGTGTACGCACCTTTACCTCTACCTTTGTTGTACCACCTTGTATATTATGGATCAATGCAATGTAATGTGGTTGAGGGGAATTTTGCAACTGCGTTTATTAAAGCTTTGGTTGCAAGTTCCCCAATCGATGTGATAGGTCCTCTAGTAGTACTAGTCTTTCTTCTTTTTTTTTTGTATCAAAGCTGGTGAAGGTCTAGGAAAACATTGAACGACTTTGCTCTAGACTTTTTGAGCTTAATTGTATTATTATCTAATTAATTAAAAAAATTGTTTGGACGCAATTATATTTTATATACAGAGTATTTTAATATT</gDNA_template>
            <first_frame> T  S  *  I  K  K  L  V  *  K  N  L  M  A  S  S  L  S  G  G  V  W  Y  T  D  I  N  T  Q  *  K  L  T  S  I  L  C  V  R  T  F  T  S  T  F  V  V  P  P  C  I  L  W  I  N  A  M  *  C  G  *  G  E  F  C  N  C  V  Y  *  S  F  G  C  K  F  P  N  R  C  D  R  S  S  S  S  T  S  L  S  S  F  F  F  V  S  K  L  V  K  V  *  E  N  I  E  R  L  C  S  R  L  F  E  L  N  C  I  I  I  *  L  I  K  K  I  V  W  T  Q  L  Y  F  I  Y  R  V  F  *  Y  </first_frame>
            <second_frame>  L  L  E  S  R  S  *  S  K  R  I  L  W  H  L  H  C  Q  V  V  C  G  T  P  T  S  I  L  S  E  N  *  Q  V  Y  Y  V  Y  A  P  L  P  L  P  L  L  Y  H  L  V  Y  Y  G  S  M  Q  C  N  V  V  E  G  N  F  A  T  A  F  I  K  A  L  V  A  S  S  P  I  D  V  I  G  P  L  V  V  L  V  F  L  L  F  F  L  Y  Q  S  W  *  R  S  R  K  T  L  N  D  F  A  L  D  F  L  S  L  I  V  L  L  S  N  *  L  K  K  L  F  G  R  N  Y  I  L  Y  T  E  Y  F  N  I </second_frame>
            <third_frame>   F  L  N  Q  E  A  S  L  K  E  S  Y  G  I  F  I  V  R  W  C  V  V  H  R  H  Q  Y  S  V  K  I  N  K  Y  I  M  C  T  H  L  Y  L  Y  L  C  C  T  T  L  Y  I  M  D  Q  C  N  V  M  W  L  R  G  I  L  Q  L  R  L  L  K  L  W  L  Q  V  P  Q  S  M  *  *  V  L  *  *  Y  *  S  F  F  F  F  F  C  I  K  A  G  E  G  L  G  K  H  *  T  T  L  L  *  T  F  *  A  *  L  Y  Y  Y  L  I  N  *  K  N  C  L  D  A  I  I  F  Y  I  Q  S  I  L  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="124542" stop="124781"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLNQEASLKESYGIFIVRWCVVHRHQYSVKINKYIMCTHLYLYLCCTTLYIMDQCNVMWLRGILQLRLLKLWLQVPQSM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="124637" stop="124837"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QVYYVYAPLPLPLLYHLVYYGSMQCNVVEGNFATAFIKALVASSPIDVIGPLVVLVFLLFFLYQSW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="+" PGL_start="125512" PGL_stop="137374"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="125512" e_stop="125636"/>
            <exon e_start="126648" e_stop="126747"/>
            <exon e_start="126927" e_stop="127121"/>
            <exon e_start="128298" e_stop="128309"/>
            <exon e_start="137306" e_stop="137374"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.750"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125512" e_stop="125636" e_length="125"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.989">
            <gDNA_intron_boundary i_start="125637" i_stop="126647" i_length="1011"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="126648" e_stop="126747" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.993">
            <gDNA_intron_boundary i_start="126748" i_stop="126926" i_length="179"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126927" e_stop="127121" e_length="195"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.304">
            <gDNA_intron_boundary i_start="127122" i_stop="128297" i_length="1176"/>
          </intron>
          <exon e_serial="4" e_score="0.750">
            <gDNA_exon_boundary e_start="128298" e_stop="128309" e_length="12"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="128310" i_stop="137305" i_length="8996"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="137306" e_stop="137374" e_length="69"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125512" stop="125636"/>
              <exon start="126648" stop="126747"/>
              <exon start="126927" stop="127121"/>
              <exon start="128298" stop="128309"/>
              <exon start="137306" stop="137374"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313208" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGAGTTCTGCAAAAGTAGGGTTTTCTTGCAAACACATCGCGCAGCCTCGCTTTTCTGTGAAGATGGGTCACTCTAACATCTGGAACGCTCACCCAAAGAACTACGGCCCTGGCTCTCGCACATG : CCGTGTGTGTGGTAATCCTCATGCAATTATTAGAAAGTATGGACTCATGTGTTGCAGACAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAG : TACCGTTAAAAATCTTGAATACGAGTTTCTACGAGGACCTCTACATTTGGTGCTGGTAGAAGACATATGGCATTAGAGCTTTTTGATTTGCATCTCCCTTCAGTTAAATGATGTAATGGGATAATTTTGATTTATGTTTTAACTTTTGGAAGTAACTGCTATGTGAACCTAAGAAAGACTAGCTTTTAAGATTTT : AGGAAAAAAATA : ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</gDNA_template>
            <first_frame> V  S  S  A  K  V  G  F  S  C  K  H  I  A  Q  P  R  F  S  V  K  M  G  H  S  N  I  W  N  A  H  P  K  N  Y  G  P  G  S  R  T  C :   R  V  C  G  N  P  H  A  I  I  R  K  Y  G  L  M  C  C  R  Q  C  F  R  S  N  A  K  E  I  G  F  I  K  :  Y  R  *  K  S  *  I  R  V  S  T  R  T  S  T  F  G  A  G  R  R  H  M  A  L  E  L  F  D  L  H  L  P  S  V  K  *  C  N  G  I  I  L  I  Y  V  L  T  F  G  S  N  C  Y  V  N  L  R  K  T  S  F  *  D  F  :  R  K  K  I  :  I  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F </first_frame>
            <second_frame>  *  V  L  Q  K  *  G  F  L  A  N  T  S  R  S  L  A  F  L  *  R  W  V  T  L  T  S  G  T  L  T  Q  R  T  T  A  L  A  L  A  H   : A  V  C  V  V  I  L  M  Q  L  L  E  S  M  D  S  C  V  A  D  S  A  S  A  A  M  P  R  K  L  A  S  S  S :   T  V  K  N  L  E  Y  E  F  L  R  G  P  L  H  L  V  L  V  E  D  I  W  H  *  S  F  L  I  C  I  S  L  Q  L  N  D  V  M  G  *  F  *  F  M  F  *  L  L  E  V  T  A  M  *  T  *  E  R  L  A  F  K  I  L :   G  K  K  * :   F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F   </second_frame>
            <third_frame>   E  F  C  K  S  R  V  F  L  Q  T  H  R  A  A  S  L  F  C  E  D  G  S  L  *  H  L  E  R  S  P  K  E  L  R  P  W  L  S  H  M  :  P  C  V  W  *  S  S  C  N  Y  *  K  V  W  T  H  V  L  Q  T  V  L  P  Q  Q  C  Q  G  N  W  L  H  Q   : V  P  L  K  I  L  N  T  S  F  Y  E  D  L  Y  I  W  C  W  *  K  T  Y  G  I  R  A  F  *  F  A  S  P  F  S  *  M  M  *  W  D  N  F  D  L  C  F  N  F  W  K  *  L  L  C  E  P  K  K  D  *  L  L  R  F   : *  E  K  N   : N  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125573" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="127002"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWVTLTSGTLTQRTTALALAHAVCVVILMQLLESMDSCVADSASAAMPRKLASSSTVKNLEYEFLRGPLHLVLVEDIWH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0038F03.1" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125512" stop="125636"/>
                    <exon start="126648" stop="126747"/>
                    <exon start="126927" stop="126935"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VSSAKVGFSCKHIAQPRFSVKMGHSNIWNAHPKNYGPGSRTCRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFIKYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 67 chains have been computed
$ 
$ memory statistics:
$ 515312 bytes spliced alignments in total
$ 26 spliced alignments have been stored
$ 19819 bytes was the average size of a spliced alignment
$ 32344 bytes predicted gene locations in total
$ 21 predicted gene locations have been stored
$ 1540 bytes was the average size of a predicted gene location
$ 8 megabytes was the average size of the backtrace matrix
$ 75 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 12:28:46
-->
