<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 11:39:29"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E357033" ref_strand="+" ref_description="SGN-E357033 [cTOS-22-C24]">
      <seq>actgaatagatatcatcgcccaactcaaaatagaaatcaatatatatcaagnattatcataaaatcaactatgatactcaacatgtagcaacaacaagcactatatcattaacaattaccgtcacgttcacacatgaggactcaagcctcaataccatactcatttgggaatcatgttcattagatttagtatattaacatctttcaagattcattatctttatttctcttgtgacggaacatgacattccgctccctcatattcattaatcctcttgtgtgaacacatgacactccgatcccctaaatctacatgacagtttcatgaacgctatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="25898" stop="76183"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26198" g_stop="26480" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="283" r_length="283" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26481" i_stop="26552" i_length="72">
            <donor d_prob="0.858" d_score="0.88"/>
            <acceptor a_prob="0.000" a_score="0.74"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26553" g_stop="26606" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="337" r_length="54" r_score="0.759"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E357033" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>337</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357033" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26198" e_stop="26480"/>
          <exon e_start="26553" e_stop="26606"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTGAGTAGATATCATCGGCCAACTCAAAATAGAAAACAATATATACCAAGTAATATCATAAACTCAACTATGATACTCAACATGTAGCAACAACAAGCACTATATCATTAACAATTTCCGTCAAGTTCACACATGAGGACTCAAGCCTCAACACCATACTCATTTGGGAATCATGTTCATTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGTCGGTACGTGACACTCCGCTCCCTCATATTCATTAATCCTCTTGTGTCGGTACGTGACACTCCGATCCCCTACTACTATGTGTCGGTACGTGACACTCTGATCCCCTACTACTATGTGTCGGAACGTGACACTCCGATCCCCTAAATCTACGTGTCGGTTCGTGAAACCCGATCC</genome_strand>
        <mrna_strand>ACTGAATAGATATCATCGCCCAACTCAAAATAGAAATCAATATATATCAAGNATTATCATAAAATCAACTATGATACTCAACATGTAGCAACAACAAGCACTATATCATTAACAATTACCGTCACGTTCACACATGAGGACTCAAGCCTCAATACCATACTCATTTGGGAATCATGTTCATTAGATTTAGTATATTAACATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGACGGAACATGACATTCCGCTCCCTCATATTCATTAATCCTCTTGTGTGA........................................................................ACACATGACACTCCGATCCCCTAAATCTACATGACAGTTTCATGAACGCTATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E391780" ref_strand="+" ref_description="SGN-E391780 [TUS-24-O2]">
      <seq>tcacaaaccgacatatagatttaggggatcggagtgtcacgtaccgacacaagaggattaatgaatattgagggagcggagtgtcacgtaccgacacaagagaaataaagataatgaatcttgaaagatgttaatatactcaatctaatgaacatgattcccaaatgagtatggtattgaggcttgagtcctcatgtgtgaacttgacggtaattgttaatgatatagtatttgttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="-" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="34087" stop="25989"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26524" g_stop="26287" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="239" r_length="239" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="-" ref_id="SGN-E391780" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>238</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E391780" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26524" e_stop="26287"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACGTACCGACACATAGTAGTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATA-TGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTGTTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGAAATTGTTAATGATATAGTGCTTGTTGTT</genome_strand>
        <mrna_strand>TCACAAACCGACATATAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATTGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTATTTGTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E357559" ref_strand="+" ref_description="SGN-E357559 [cTOS-23-F2]">
      <seq>tagtcttcggtggaggtaggttattgtttctcttacgatattcgtagtaaactcttaatagagaatgatatgtattgataatattgtaaaccctgctatgtgcttaattgtatgcttgcatgaatgtaactatataattgttattatataagcatgatgaagttattgaatcccaaatcttgtaaaaacctaatctctttttaatgatgatgccttggtaagggagaaggcttgatgaactaaagtaatgagattgatgatgccttggtaagggagaaggcttgatgaattgatagaatgagattaggggatcgggtgtcacgaactgacacgtagaattaggggatcgggtgtcacaaaccgacacgtagattaagggatcaggtgtcacgaaccaacaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="-" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="69569" stop="26388"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27087" g_stop="26687" g_length="401"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="402" r_length="402" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="-" ref_id="SGN-E357559" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>401</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E357559" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27087" e_stop="26687"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTCTTCGGTGGAGGTAGGTTATGGTTT-TC--ATGCT-TTCATAGTAAACTCTTAATATAGAATGATATGTATTGATAATATTGTAAACCCTGCTATGTGCTTAATTGTATGCATGCATGAACGTGATTATATAATTGTGATTATATTAAGCATGATGAAGTCATTGAATCCCAAATCTTGATAAAAACCTAATCTCTTTTTAATGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAAGGAGAAGGCTTGATGAGTTGATAGAATGAGATTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCATGAAGCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACG</genome_strand>
        <mrna_strand>TAGTCTTCGGTGGAGGTAGGTTATTGTTTCTCTTACGATATTCGTAGTAAACTCTTAATAGAGAATGATATGTATTGATAATATTGTAAACCCTGCTATGTGCTTAATTGTATGCTTGCATGAATGTAACTATATAATTGTTATTATA-TAAGCATGATGAAGTTATTGAATCCCAAATCTTG-TAAAAACCTAATCTCTTTTTAATGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAATTGATAGAATGAGATTAGGGGATCGGGTGTCACGAACTGACACGTAGAATTAGGGGATCGGGTGTCACAAACCGACACGTAGA-TTAAGGGATCAGGTGTCACGAACCAACACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355232" ref_strand="+" ref_description="SGN-E355232 [cTOS-18-A6]">
      <seq>tcaatgcgaggaagaggatacttgttcttaatagttaccttgttcagttgtctgtagtctatgcacattctaaaacttccatccttcttcttcacaaataaaactggagcaccccaaggagatgcacttggtctaatgaagaccttgctcaacaactcttgaagttgagcctttaactctcttaattcggcgggagccattctataagggggtatagaaatggggcgtgtgcctggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcaggaaacacgtccaaaaactcgcggactaccgaaaccgactcaattgagggtacttgagtagtgtcatccttgagatgtgccaagaaagctgaacaccctttactaaccattttcttagcacgaagaaaggatatgatacgcaccagattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaacgtcaccgttttagcattacaatccaagatcgcaaaatttggagaaagccaagtcatacccagaattacatcaatgtcacccatttctaaaaaaccaaatctacataagtgttgctccccacgaaattcnacaaaacagaactatgtaccttttcaactaccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="30050" stop="31308"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30350" g_stop="31008" g_length="659"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E355232" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355232" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30350" e_stop="31008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATGCGGGAAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTCACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGCCTTTGTTTAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATCGAAATGGGGCGAGTACCCGGTTCAAGGTCAATACAGAAATCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCACCAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATATGCACCGGATTGGAAGTGTACTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTTACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCAC</genome_strand>
        <mrna_strand>TCAATGCGAGGAAGAGGATACTTGTTCTTAATAGTTACCTTGTTCAGTTGTCTGTAGTCTATGCACATTCTAAAACTTCCATCCTTCTTCTTCACAAATAAAACTGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACCTTGCTCAACAACTCTTGAAGTTGAGCCTTTAACTCTCTTAATTCGGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCTGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGAAACACGTCCAAAAACTCGCGGACTACCGAAACCGACTCAATTGAGGGTACTTGAGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTGAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGATATGATACGCACCAGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAATGTCACCCATTTCTAA-AAAACCAAATCTACATAAGTGTTGCTCCCCACGAAATTCNACAAAACAGAACTATGTACCTTTTCAACTACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E353359" ref_strand="-" ref_description="SGN-E353359 [cTOS-15-G18]">
      <seq>gcaaggtaggatgtaggtcaatgcatatgaggctaagtttcgtgcactatccagatatgccactcaactttgtttcagtccacaagagaggattcgtcgttttgtgaaagggttgaggtcagagttgcggatttcagcgttacaggtagcggctacggcaaaatccttgcaagaaatggttgacttcgatgtaattctgggtatgacttggctttctccaaattttgcaatcttggattgtaatgctaaaaccgtgacgttagccaagcctgggacagatctgttagtgtaggagggtgactacacttccaatccggtgcgtatcatctcctttcttcgtgctaagaaaatggttagtaaagggtgtttagctttcttggcacatctcaaggataacactacccaagtaccttcgattgactcagtttcagtagttcgtgagtttatggatgtgttccctgcagatcatcctggtatgccaccggatagggatattgacttctgtattgatctcgaaccgggcacacgccccatttttatacccccttatagaatggctcccgcagagttaagagagttaaaggcacaacttcaagagttattgaacaaaggcttcattagaccaagtgcatctccttggggtgctccggttttgttgtaaagatcggcagtttttgaatgtgcatagactaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="-" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="32145" stop="30138"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31845" g_stop="31673" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31672" i_stop="30930" i_length="743">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30929" g_stop="30402" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="694" r_length="521" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="-" ref_id="SGN-E353359" ref_strand="-">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>701</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353359" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="31845" e_stop="31673"/>
          <exon e_start="30929" e_stop="30402"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACCCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCGTTTTGTGAAGGGGTTGAGGTCAGAGTTGCGGATTTCAGCCTTACAGGTAGCGGCTACGGCAAAATCCTTCCAAGAAGTGGTAGATTTCGTGGTAGAGGTGGAAGGAGTGAAGCCAGATGAATTCACCATGGCATCGACATCAAAGAGGCTTCGAAAGGGAGGTGGGTTTAATGGTTCTTACTCTAGAGGACAGGGTTCCGGAGGTTACTCAGTTCGACCAATTCAGTCTTCGCTACAGACTGTAGTTGGGGGTCCACCTCAGACCGGTCAACACTTCTCTGAGAGGCCTATGCTTGACTCTAGAGAGTGTTATGGATGTGGGGAGACTGGACATATTAGGAGGAATTGTCCCAAACAGAGTTATAGACCCCCAATGGCTAGAGGTAGAGGTGGTCATAATAGAGGCCGTTATTCTGGAGGACGTGGTGGTCGAGGTAATGGTGGTCACCAAAATGGTCGAGGTGATGGGCAAATGGAGCCACTACATCACAACATGGTAGGGGCAATGGACAGACAAACGATAGAGCCCATTGTTACGCTTTCCCTGGGCGGTCTGAAGCGGAGGCATCTGATGTTGTCATCACAGGTAATCTTCTGGTTTGTGATTGCATGGCTTCTGTATTGTTTGATCCTGGATCCACATTTTCTTATGTATCTTCCTCATTTGCTAATGGTCTAAACTTACATTGTGAATTACTTGATATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGGTAGTTGAAAAGGTATATAGGTCTTGTTTGGTGAACTTTGTGGGGAGCAACACTTATGTAGATTTGGTTATCTTAGAAATGGATGATTTTGATGTAATTCTGGGTATGACTTGGCTTTCTCCGCAATTTGCGATCTTGGATTGTAATGCTAAAACGGTAACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGAGTACACTTCCAATCCGGTGCATATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTTGGTGGTCCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGATTTCTGTATTGACCTTGAACCGGGTACTCGCCCCATTTCGATACCCCCTTATAGAATGGCTCCCGCGGAGTTAAGAGAGTTAAAAGCCCAACTTCAAGAGTTGTTAAACAAAGGCTTTATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTGTTTGTGAAGAAGAAGGATGGGAGTTTTCGGATGTGCATAGACTACC</genome_strand>
        <mrna_strand>GCAAGGTAGGATGTAGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACTCAACTTTGTTTCAGTCCACAAGAGAGGATTCGTCGTTTTGTGAAAGGGTTGAGGTCAGAGTTGCGGATTTCAGCGTTACAGGTAGCGGCTACGGCAAAATCCTTGCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACCGTGACGTTAGCCAAGCCTGGGACAGATCTGTTAGTGTAGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATAACACTACCCAAGTACCTTCGATTGACTCAGTTTCAGTAGTTCGTGAGTTTATGGATGTGTTCCCTGCAGATCATCCTGGTATGCCACCGGATAGGGATATTGACTTCTGTATTGATCTCGAACCGGGCACACGCCCCATTTTTATACCCCCTTATAGAATGGCTCCCGCAGAGTTAAGAGAGTTAAAGGCACAACTTCAAGAGTTATTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTG-TTGT--A-AAG-A--TCGGCAGTTTTTGAATGTGCATAGACTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355244" ref_strand="+" ref_description="SGN-E355244 [cTOS-18-K20]">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttagcaaatgaggaagatacantagaaaacgtggatcccaggatcaacaatacagaagccatgcaatcacaatcgaaagattacctgtgatgacagcatctaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="30119" stop="31480"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30419" g_stop="31180" g_length="762"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="761" r_length="761" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E355244" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355244" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30419" e_stop="31180"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTCCCATCCTTCTTCTTCACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGCCTTTGTTTAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATCGAAATGGGGCGAGTACCCGGTTCAAGGTCAATACAGAAATCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCACCAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATATGCACCGGATTGGAAGTGTACTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTTACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAGTTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGAT-CCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAACATCAGAT</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAGCAAATGAGGAAGATACANTAGAAAACGTGGATCCCAGGATC-AACAATACAGAAGCCATGCAATCACAATCGA-AAGATTACCTGTGATGACAGCATCTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E351414" ref_strand="+" ref_description="SGN-E351414 [cTOS-12-D7]">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="30119" stop="31379"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30419" g_stop="31079" g_length="661"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="661" r_length="661" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E351414" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351414" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30419" e_stop="31079"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTCCCATCCTTCTTCTTCACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGCCTTTGTTTAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATCGAAATGGGGCGAGTACCCGGTTCAAGGTCAATACAGAAATCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCACCAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATATGCACCGGATTGGAAGTGTACTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTTACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAGTTTAGACCATTAG</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355026" ref_strand="+" ref_description="SGN-E355026 [cTOS-19-F16]">
      <seq>gaacacatccaaaaattctcaaactaccaaaactaattcaattgagggtacttggatagtgtcatccttgagatgtgccaagaaggatagacaacccttactaaccatcttctgagcacaaagaaaggagataatacgcaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaacgtcaccgttttagcattacaatccaagatcgcaaaattgggagaaagccaagtcatacccagaattacatcaaagtcacccatttctaaagtaaccaaatctagataagtgttgctccccacgaaattcaccaaacaagacctatgtaccttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagtaattcacaatgcaattttagaccattagcaaatgatgaagatacatatgaaaacgtggagccagggtcaaataatacagatgccatgcaatcacaaaccaagagattacctgtgataacagcatcagacgcctctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="30346" stop="31488"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30646" g_stop="31188" g_length="543"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="543" r_length="543" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E355026" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355026" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30646" e_stop="31188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACACATCCAGAAACTCACGGACCACCAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATATGCACCGGATTGGAAGTGTACTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTTACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAGTTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAACATCAGATGCCTCCGC</genome_strand>
        <mrna_strand>GAACACATCCAAAAATTCTCAAACTACCAAAACTAATTCAATTGAGGGTACTTGGATAGTGTCATCCTTGAGATGTGCCAAGAAGGATAGACAACCCTTACTAACCATCTTCTGAGCACAAAGAAAGGAGATAATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAAATTGGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAGTCACCCATTTCTAAAGTAACCAAATCTAGATAAGTGTTGCTCCCCACGAAATTCACCAAACAAGACCTATGTACCTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGTAATTCACAATGCAATTTTAGACCATTAGCAAATGATGAAGATACATATGAAAACGTGGAGCCAGGGTCAAATAATACAGATGCCATGCAATCACAAACCAAGAGATTACCTGTGATAACAGCATCAGACGCCTCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E244046" ref_strand="+" ref_description="SGN-E244046 [cLEE-1-H7]">
      <seq>aaacacgaataggcatatcaagtaattcacaatgtaaagttagaccattagcaaatgaggaagatacataagaaaatgtggatccaggatcaaacaatacagaagccatgcaatcacaaaccaaaagattacctgtgatgacaacatcagattcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcattcttatgtctgttgcccctaccatgttgtgatgtagtggctccagtttgcccatcacctcggccgttttggtgaccaccatttcctcgaccgccacgtcctccagaataacggactctgccatgaccacctctacctctaacctttggaggtctgtaactctgttttggacaatatctcttaatatgtccaatctccccacacccatagcactctctgggttcatgcataagtctctcagagaagtgttgaccggtcgaaggtggacccccaactacagtctgtagtgaagactgaattggtcggactgagtaacttcccgaaccctgtcctctagtgtaagcaccattaaactcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="30729" stop="31886"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31029" g_stop="31586" g_length="558"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="559" r_length="559" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E244046" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E244046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31029" e_stop="31586"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACACGAATAGGCATATCAAGTAATTCACAATGTAAGTTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAACATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCTCTATCGTTTGTCTGTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCCA-TTTGCCCATCACCTCGACCATTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTATTATGACCACCTCTACCTCTAGCCATTGGGGGTCTATAACTCTGTTTGGGACAATTCCTCCTAATATGTCCAGTCTCCCCACATCCATAACACTCTCTAGAGTCAAGCATAGGCCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGCGAAGACTGAATTGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACCCACC</genome_strand>
        <mrna_strand>AAACACGAATAGGCATATCAAGTAATTCACAATGTAAAGTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTGATGACAACATCAGATTCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCATTCTTATGTCTGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGGCCGTTTTGGTGACCACCATTTCCTCGACCGCCACGTCCTCCAGAATAACGGACTCTGCCATGACCACCTCTACCTCTAACCTTTGGAGGTCTGTAACTCTGTTTTGGACAATATCTCTTAATATGTCCAATCTCCCCACACCCATAGCACTCTCTGGGTTCATGCATAAGTCTCTCAGAGAAGTGTTGACCGGTCGAAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGCACCATTAAACTCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E214046" ref_strand="+" ref_description="SGN-E214046 [cLEC-80-E17]">
      <seq>acgaataggcatatcaagaaattcacaatgtaaatttagaccattagcaaatgaggaagatacataagaaaacgtggatccaggatcaaacaatacggaagccatgcaatcacaaacaagaagattacctgtgatgacagcatcagatgcctccgctttagaccgcccagggaaagcgtaacaatgggccctatagtttgtttgtccattgcccctaccatgtcgtgatgtagtggccccagtttgtccattacctctgccgttttggtgaccaccattgcctcgaccaccacgtcctccaaaataacggcctctaccatgacaacctctacctctaactattgggggtctataacttggtccgggaaaatttctcctaatatgtccaatctccccacatccataacattctctagagtcactcataggcccctcggagaagtgttgaccggtctgaggtggacccccaactacagtttgtagtgaagactgaatgggtcgaactgagtaacctccagaaccttgtcctctagagtaagaacccttaaactcatctcccctttgaaacctcatcgatgtcgatgtcgtggtgaagtcgtctggtttcactccttccacttctatcaaaaagtctaccacttcttggaaggattttgccgttgccgctacctgtaagggcgaaatccgcaattctgacctcaaccccttcacaaccggcgaatccgctcttgagggactgaacagagttgagtggcatatctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="30733" stop="32044"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31033" g_stop="31795" g_length="763"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="763" r_length="763" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E214046" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E214046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31033" e_stop="31795"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAATAGGCATATCAAGTAATTCACAATGTAAGTTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAACATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCTCTATCGTTTGTCTGTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCCA-TTTGCCCATCACCTCGACCATTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTATTATGACCACCTCTACCTCTAGCCATTGGGGGTCTATAACTCTGTTTGGGACAATTCCTCCTAATATGTCCAGTCTCCCCACATCCATAACACTCTCTAGAGTCAAGCATAGGCCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGCGAAGACTGAATTGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACCCACCTCCCTTTCGAAGCCTCTTTGATGTCGATGCCATGGTGAATTCATCTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACCACTTCTTGGAAGGATTTTGCCGTAGCCGCTACCTGTAAGGCTGAAATCCGCAACTCTGACCTCAACCCCTTCACAAAACGACGAATCCGCTCTTG-TGGACTGAAACAAAGTTGGGTGGCATATCTGG</genome_strand>
        <mrna_strand>ACGAATAGGCATATCAAGAAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACGGAAGCCATGCAATCACAAACAAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTTAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATAGTTTGTTTGTCCATTGCCCCTACCATGTCGTGATGTAGTGGCCCCAGTTTGTCCATTACCTCTGCCGTTTTGGTGACCACCATTGCCTCGACCACCACGTCCTCCAAAATAACGGCCTCTACCATGACAACCTCTACCTCTAACTATTGGGGGTCTATAACTTGGTCCGGGAAAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTAGAGTCACTCATAGGCCCCTCGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTTTGTAGTGAAGACTGAATGGGTCGAACTGAGTAACCTCCAGAACCTTGTCCTCTAGAGTAAGAACCCTTAAACTCATCTCCCCTTTGAAACCTCATCGATGTCGATGTCGTGGTGAAGTCGTCTGGTTTCACTCCTTCCACTTCTATCAAAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTACCTGTAAGGGCGAAATCCGCAATTCTGACCTCAACCCCTTCAC-AACCGGCGAATCCGCTCTTGAGGGACTG-AACAGAGTTGAGTGGCATATCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E356912" ref_strand="+" ref_description="SGN-E356912 [cTOS-22-F17]">
      <seq>caggatcaaacaatacggaagccatgcaatcacaaactagaagattacctgtgatgacagcatcagatgcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcgtttgtctgcccattgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccgttttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataacttggtccaggacaatttatcctaatatgtccaatctccccacatccataacattctctggagtcactcataggccccttggagaagtgttgaccggtctgaggtggacccccaactacagtctgtagtgaagactgaatgggtcgagccgagtaacctccggaaccttgtcctctagagtaagaacccttaaactcacctccctttcgaaacctctttgatgttgatgtcgtggtgaagtcgtctggcttcactccttccacttctatcacaaagtctaccacttcttggaaggattttgccgttgccgctacctgtaaggccgaaatccgcaattctgacctcaaccccttcacaaaccggagaatccgctcttgaggactgaaacagagttgagtggcatatccggatagtgcacggaacttagcctcataagcattaaccgacatcctaccttgctctaggctcaggaactcatctcttttcctatccctcaaagtccgggggatatactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="30813" stop="32201"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31113" g_stop="31901" g_length="789"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="790" r_length="790" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E356912" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>789</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356912" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31113" e_stop="31901"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAACATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCTCTATCGTTTGTCTGTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCCA-TTTGCCCATCACCTCGACCATTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTATTATGACCACCTCTACCTCTAGCCATTGGGGGTCTATAACTCTGTTTGGGACAATTCCTCCTAATATGTCCAGTCTCCCCACATCCATAACACTCTCTAGAGTCAAGCATAGGCCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGCGAAGACTGAATTGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACCCACCTCCCTTTCGAAGCCTCTTTGATGTCGATGCCATGGTGAATTCATCTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACCACTTCTTGGAAGGATTTTGCCGTAGCCGCTACCTGTAAGGCTGAAATCCGCAACTCTGACCTCAACCCCTTCACAAAACGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGGGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAATGTCCGAGGGATATACTT</genome_strand>
        <mrna_strand>CAGGATCAAACAATACGGAAGCCATGCAATCACAAACTAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGCCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTGGTCCAGGACAATTTATCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCACTCATAGGCCCCTTGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAGCCGAGTAACCTCCGGAACCTTGTCCTCTAGAGTAAGAACCCTTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTTGATGTCGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTACCTGTAAGGCCGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGAGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCCGGATAGTGCACGGAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGCTCAGGAACTCATCTCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E353805" ref_strand="+" ref_description="SGN-E353805 [cTOS-10-C24]">
      <seq>ggatcaacaatacggaagccatgcaatcacaaactagaagattacctgtgatgacagcatcagatgcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcgtttgtctgcccattgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccgttttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataacttggtccaggacaatttatcctaatatgtccaatctccccacatccataacattctctggagtcactcataggccccttggagaagtgttgaccggtctgaggtggacccccaactacagtctgtagtgaagactgaatgggtcgagccgagtaacctccggaaccttgtcctctaaagtaagaacccttaaactcacctccctttcgaaacctctttgatgttgatgtcgtggtgaagtcgtctggcttcactccttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="30815" stop="31947"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31115" g_stop="31647" g_length="533"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="533" r_length="533" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E353805" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>533</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E353805" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31115" e_stop="31647"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAACATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCTCTATCGTTTGTCTGTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCCA-TTTGCCCATCACCTCGACCATTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTATTATGACCACCTCTACCTCTAGCCATTGGGGGTCTATAACTCTGTTTGGGACAATTCCTCCTAATATGTCCAGTCTCCCCACATCCATAACACTCTCTAGAGTCAAGCATAGGCCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGCGAAGACTGAATTGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACCCACCTCCCTTTCGAAGCCTCTTTGATGTCGATGCCATGGTGAATTCATCTGGCTTCACTCCTTCC</genome_strand>
        <mrna_strand>GGATC-AACAATACGGAAGCCATGCAATCACAAACTAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGCCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTGGTCCAGGACAATTTATCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCACTCATAGGCCCCTTGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAGCCGAGTAACCTCCGGAACCTTGTCCTCTAAAGTAAGAACCCTTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTTGATGTCGTGGTGAAGTCGTCTGGCTTCACTCCTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E356209" ref_strand="+" ref_description="SGN-E356209 [cTOS-20-H15]">
      <seq>ttcagaccgcccagggaaagcgtaacaatgggccctatcgttcgtctgtccgttgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccattttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataactttgtctgggacaatttttcctaatatgtccaatctccccacatccataacattctctggagtcaagcataggcccctcggagaagtgttaaccggtctgaggtggtctcccaactacagtctgtagtgaagactgaattggtcggactgagtaacttcccgaaccctgtcctctagtgtaagaaccattaaactcacctcccttccgaaacctttttgatgtcgatgttgtggtgaagtcgtctggcttcactccttccacttctatcacaaagtctaccacttcttggaaggattttgccgttgccgctatctgtaaggacgaaatccgcaattctgacctcaaccccttcacaaaccggcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaaccgacatcctaccttgctctaggctcaagaactcatcccttttcctatccctcaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="30889" stop="32185"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31189" g_stop="31885" g_length="697"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="698" r_length="698" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E356209" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356209" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31189" e_stop="31885"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAGACCGCCCAGGGAAAGCGTAACAATGGGCTCTATCGTTTGTCTGTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCCA-TTTGCCCATCACCTCGACCATTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTATTATGACCACCTCTACCTCTAGCCATTGGGGGTCTATAACTCTGTTTGGGACAATTCCTCCTAATATGTCCAGTCTCCCCACATCCATAACACTCTCTAGAGTCAAGCATAGGCCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGCGAAGACTGAATTGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACCCACCTCCCTTTCGAAGCCTCTTTGATGTCGATGCCATGGTGAATTCATCTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACCACTTCTTGGAAGGATTTTGCCGTAGCCGCTACCTGTAAGGCTGAAATCCGCAACTCTGACCTCAACCCCTTCACAAAACGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGGGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAATG</genome_strand>
        <mrna_strand>TTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTCGTCTGTCCGTTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCATTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTTGTCTGGGACAATTTTTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCAAGCATAGGCCCCTCGGAGAAGTGTTAACCGGTCTGAGGTGGTCTCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGAACCATTAAACTCACCTCCCTTCCGAAACCTTTTTGATGTCGATGTTGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTATCTGTAAGGACGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E356614" ref_strand="+" ref_description="SGN-E356614 [cTOS-21-N3]">
      <seq>gcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgntcagtttccccatccctccctttctctattacttcctcagtcagtggaagagtcactgccctagtatcagatgggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="31450" stop="32768"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31749" g_stop="32468" g_length="720"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="720" r_length="720" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E356614" ref_strand="+">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356614" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31749" e_stop="32468"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAATCCGCTCTTGTGGACTGAAACAAAGTTGGGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAATGTCCGAGGGATATACTTCTCCATAAACAAGCTAGAGAATGACGCCCAAGTCATAGGTGGTGCTTCTGTTGGTTGACACTCAACATGTGACCGCCACCATATTTTGGCATTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCATTCTACAATACCCATCTTGTGTAGTAGCTCATGACAGTCAACCAGAAAATCGTAAGCATCCTCAGATTCAGTACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAGATGTGGAAATGTGCCTATATCTAATGAGGCATCCATACGAGGAGCCATAGTGGCTGCATGTTGTACCTCTGAAACCGGAGGTGTTGGTGCAGAAAACACTGGAGGTGCCTGACCTTGATCAGACAACCCACTGAGATAGGCGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCAATCCCTCATTCTGCACTTGTTCATTTTCCCCAT-ACTCCCCTTCTCTTATTACTTCCTCAGTCGGTGGAGGAGTCACTGCCGTAGTATCAGATGGGCT</genome_strand>
        <mrna_strand>GCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGNTCAGTTTCCCCATCCCTCCCTTTCTC-TATTACTTCCTCAGTCAGTGGAAGAGTCACTGCCCTAGTATCAGATGGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E352401" ref_strand="+" ref_description="SGN-E352401 [cTOS-9-N1]">
      <seq>aatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtgccatttccctcatttgcacttgttcagtttccccatcctccccttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="31452" stop="32715"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31752" g_stop="32415" g_length="664"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="664" r_length="664" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E352401" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>664</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352401" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31752" e_stop="32415"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCCGCTCTTGTGGACTGAAACAAAGTTGGGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAATGTCCGAGGGATATACTTCTCCATAAACAAGCTAGAGAATGACGCCCAAGTCATAGGTGGTGCTTCTGTTGGTTGACACTCAACATGTGACCGCCACCATATTTTGGCATTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCATTCTACAATACCCATCTTGTGTAGTAGCTCATGACAGTCAACCAGAAAATCGTAAGCATCCTCAGATTCAGTACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAGATGTGGAAATGTGCCTATATCTAATGAGGCATCCATACGAGGAGCCATAGTGGCTGCATGTTGTACCTCTGAAACCGGAGGTGTTGGTGCAGAAAACACTGGAGGTGCCTGACCTTGATCAGACAACCCACTGAGATAGGCGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCA-ATCCCTCATTCTGCACTTGTTCATTTTCCCCATACTCCCCTTCT</genome_strand>
        <mrna_strand>AATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGCCATTTCCCTCATT-TGCACTTGTTCAGTTTCCCCATCCTCCCCTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E352180" ref_strand="+" ref_description="SGN-E352180 [cTOS-13-I20]">
      <seq>cccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattataggcccagtagtcaaacgtggaaatgtacctatgtgcaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataaaccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgttcagtttccccatcctccccttctcttattacttcctcagtcggtggaggagtcaccgccctagtaccagatgggctcggttctcgttctcttcctctagatgacgtcctcccacgacctctaccacggccccttgccgctgttctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="31807" stop="32840"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32107" g_stop="32539" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="433" r_length="433" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E352180" ref_strand="+">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352180" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32107" e_stop="32539"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAGATGTGGAAATGTGCCTATATCTAATGAGGCATCCATACGAGGAGCCATAGTGGCTGCATGTTGTACCTCTGAAACCGGAGGTGTTGGTGCAGAAAACACTGGAGGTGCCTGACCTTGATCAGACAACCCACTGAGATAGGCGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCAATCCCTCATTCTGCACTTGTTCATTTTCCCCATACTCCCCTTCTCTTATTACTTCCTCAGTCGGTGGAGGAGTCACTGCCGTAGTATCAGATGGGCTAGGTGCTCGTCCTCTTCCCCTAGAGGACGTCCACCCACGACCTCTACCACGGCCTCTTGCCGCTGCTCTTC</genome_strand>
        <mrna_strand>CCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAAACGTGGAAATGTACCTATGTGCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAAACCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCTCTTATTACTTCCTCAGTCGGTGGAGGAGTCACCGCCCTAGTACCAGATGGGCTCGGTTCTCGTTCTCTTCCTCTAGATGACGTCCTCCCACGACCTCTACCACGGCCCCTTGCCGCTGTTCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E392027" ref_strand="+" ref_description="SGN-E392027 [TUS-24-O2](-)">
      <seq>cagcaaacgtgccatcgtgttcaactcaacagtaattcaagccagtcttactacatcggaaattcagggtgagctaatgcttctagcttggactggatcttcttcttcaagtcttgatgccttgaacttccggcatggactagcttcttatgtatttttagcttttagactactcttagtttagtcatttgatcgtagatgttcttgtggtgatgacttccagattttggggaataatagatgttgaattttagaagttaatgaattggtctgtatttaatgagtttaagtcttccacattactttctgttgatattatattgaaatgttaaggttagattggttggttcgctcacataggagggtaagtgtgggtgccagtcgcaacccggttttggtcgtgacaaacttggtatcagagcattaggttcgttggtctcatcacacaagaacgagtctagtagagtcttaaggaacggtagggggatgcctttacttttccttgagaggctataagacttttggaaaattccattctttcttctttcgtgctattacttgggtccaattggtatctaggtgatacaaattggtatctgaccatcttcactctatttcgcagatggttagaactagagcaacgactacgccagcatcaacaccagcaccggcgggacagggtgcgactgagccagccactggggctgtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="-" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="33560" stop="32246"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33260" g_stop="32546" g_length="715"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="710" r_length="710" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="-" ref_id="SGN-E392027" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392027" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33260" e_stop="32546"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCAAACGTGCCATCGTCTTCAACTCAACAGTAATTCAAGCCAGTCTTACTACATCGGAAATTCAGGGTGAGCTAATGCTTCTAGCTTGGACTGGATCTTCTTCTTCAAGTCTTGATGCCTTGAACTTCCGGCATGGACTAGTTTCTTATGTATTTTTAGCTTTTAGAATACTCTTAGTTTAGTCATTTGATCGTAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGGGAATAATAGATGTTGAATTTTAGAAGTTAATGAATTGGTCTTTATTTAATGAGTTTAAGTCTTCCGCATTACTTTCTGTTGATATTATATTGAAATGTTAAGGTTAGATTGGTTGGTTCGCTCACATAGGAGGGAAAGTGTGGGTGCCAGTCGCAACCCGGTTTGGGTCGTCACAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACGAGTCTAGTAGAGTCTTAAGGAACGGTAGAGGGACGCCTTTACTTTTCCTTGAGAGGCTATAAGCCTTTAGGAAAATTCCATTCTTTCTTTCTTCTTTCGTGCTATTACTTGGGTCCAATTGGTATCTAGGTGATACAAATTGGTATCTGACCATCTTTACTCTATTTCGCAGATGGTTAGAACTAGAGCAACGACTACGCCAGCATCAACACCAGCACCGGCGGGACAGGGTGCGACTGAGGCAGCCACTGGGGCTGTAG</genome_strand>
        <mrna_strand>CAGCAAACGTGCCATCGTGTTCAACTCAACAGTAATTCAAGCCAGTCTTACTACATCGGAAATTCAGGGTGAGCTAATGCTTCTAGCTTGGACTGGATCTTCTTCTTCAAGTCTTGATGCCTTGAACTTCCGGCATGGACTAGCTTCTTATGTATTTTTAGCTTTTAGACTACTCTTAGTTTAGTCATTTGATCGTAGATGTTCTTGTGGTGATGACTTCCAGATTTT-GGGGAATAATAGATGTTGAATTTTAGAAGTTAATGAATTGGTCTGTATTTAATGAGTTTAAGTCTTCCACATTACTTTCTGTTGATATTATATTGAAATGTTAAGGTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTCGCAACCCGGTTTTGGTCGTGACAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACGAGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGATGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTTGGAAAATTCCA----TTCTTTCTTCTTTCGTGCTATTACTTGGGTCCAATTGGTATCTAGGTGATACAAATTGGTATCTGACCATCTTCACTCTATTTCGCAGATGGTTAGAACTAGAGCAACGACTACGCCAGCATCAACACCAGCACCGGCGGGACAGGGTGCGACTGAGCCAGCCACTGGGGCTGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E246710" ref_strand="+" ref_description="SGN-E246710 [cLEF-45-O22]">
      <seq>cacaaaccgacatatagatttaggggatcggagtgtcacgtaccgacacaagaggattaatgaatattgagggagcggagtgtcacgtaccgacacaagagaaataaagataatgaatcttgaaagatgttaatatactcaatctaatgaacatgattcccaaatgagtatggtattgaggcttgagtcctcatgtgtgaacttgacggtaattgttaatgatatagtatttgttgttgctacatgttgagtatcatagttgattttatgatattacttggtatatatattgatttctattttgagttggccgatgatatctactcagtacccgtgttttgtactgacccctacttttatgttctcttcttgtttatttgtggagtgcagcaaacgtgccatcgtgttcaactcaacagtaattcaagccagtcttactacatcggaaattcagggtgagctaatgcttctagcttggact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="-" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="34086" stop="32867"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33644" g_stop="33167" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="481" r_length="481" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="-" ref_id="SGN-E246710" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33644" e_stop="33167"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACGTACCGACACATAGTAGTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATA-TGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTGTTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGAAATTGTTAATGATATAGTGCTTGTTGTTGCTACATGTTGAGTATCATAGTTGAGTTTATGATATTACTTGG--TATATATTGTTTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTATTTTGTACTGACCCCTACTTTTATGTTTTCTTTTTGTTTATTTGTGGAGTGCAGCAAACGTGCCATCGTCTTCAACTCAACAGTAATTCAAGCCAGTCTTACTACATCGGAAATTCAGGGTGAGCTAATGCTTCTAGCTTGGACT</genome_strand>
        <mrna_strand>CACAAACCGACATATAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATTGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTATTTGTTGTTGCTACATGTTGAGTATCATAGTTGATTTTATGATATTACTTGGTATATATATTGATTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTCTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGCCATCGTGTTCAACTCAACAGTAATTCAAGCCAGTCTTACTACATCGGAAATTCAGGGTGAGCTAATGCTTCTAGCTTGGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E444688" ref_strand="+" ref_description="SGN-E444688 [cSTA-43-H10]">
      <seq>aaactgtatatcatgtattacttaatcactccaattcttgtttctctcgtttttgtaatcactttgagatatttcaattcatcaaaaacaaaattacctcttcctccaggtccattttcatggccatttattggaaatcttttccaagttggtagaaaacgtcctcatgcttctctagcaaagttagctcaatctcatggtcctgatttaatgtccataaggttcggcacacgtctcgtggtcgtagcctcatcccctgcagctgctgcagaggtacttaaaacacatgatcgtatgctttctggtcgtttcgtttctcatcccatccgagttgagggatcgaaacttcacaatgtgtcaactgctttttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57346" stop="58318"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57646" g_stop="58018" g_length="373"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="372" r_length="372" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E444688" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>373</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E444688" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57646" e_stop="58018"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCTGGTGTATGATGTATTACTTAATAACTCCAATTCTTCTTTCTCTCGTTTTTGTAATCACTTTGAGATATTTCTATCGATCAAAAACAAAATTACCGCTTCCTCCAGGTCCATTTTCATGGCCCTTTATTGGAAATCTTTTCCATGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGCTAGCTCAATCTCATGCTCCTGATTTAATGTCCTTAAGGTTCGGTACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCTGCGGTTCTTAAAACACATGATCGTTTGCTTTCTGGTCGTTTCGTTTCTCATCCCATACGAGTTGAGGGATCGAAACTTCATAATGTGTCAACTGCTTTTTTA</genome_strand>
        <mrna_strand>AAACT-GTATATCATGTATTACTTAATCACTCCAATTCTTGTTTCTCTCGTTTTTGTAATCACTTTGAGATATTTCAATTCATCAAAAACAAAATTACCTCTTCCTCCAGGTCCATTTTCATGGCCATTTATTGGAAATCTTTTCCAAGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGTTAGCTCAATCTCATGGTCCTGATTTAATGTCCATAAGGTTCGGCACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCAGAGGTACTTAAAACACATGATCGTATGCTTTCTGGTCGTTTCGTTTCTCATCCCATCCGAGTTGAGGGATCGAAACTTCACAATGTGTCAACTGCTTTTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E444447" ref_strand="+" ref_description="SGN-E444447 [cSTA-42-P2]">
      <seq>acctgtatatcatgtattacttaatcactccaattcttgtttctctcgtttttgtaatcactttgagatatttcaattcatcaaaaacaaaattacctcttcctccaggtccattttcatggccatttattggaaatcttttccaagttggtagaaaacgtcctcatgcttctctagcaaagttagctcaatctcatggtcctgatttaatgtccataaggttcggcacacgtctcgtggtcgtagcctcatcccctgcagctgctgcagaggtacttaaaacacatgatcgtatgctttctggtcgtttcgtttctcatcccatccgagttgagggatcgaaacttcacaatgtgtcaactgcttttttagaagagtgtgatgagaattggaaaaacgttcgaactatatacaggggagccctgttttctaacaaagcattggaatcgcaagtaagtttaagggagatgaaaatcagggaaatgatgcaatatttagatactaaaaagggacaagtgattaaaataaagtttgtggtttttgtgaccgcgttaaatgtgttgggtaatttacttctttcagtagatttaattgattat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57347" stop="58546"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57647" g_stop="58246" g_length="600"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="599" r_length="599" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E444447" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>600</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E444447" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57647" e_stop="58246"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTGGTGTATGATGTATTACTTAATAACTCCAATTCTTCTTTCTCTCGTTTTTGTAATCACTTTGAGATATTTCTATCGATCAAAAACAAAATTACCGCTTCCTCCAGGTCCATTTTCATGGCCCTTTATTGGAAATCTTTTCCATGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGCTAGCTCAATCTCATGCTCCTGATTTAATGTCCTTAAGGTTCGGTACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCTGCGGTTCTTAAAACACATGATCGTTTGCTTTCTGGTCGTTTCGTTTCTCATCCCATACGAGTTGAGGGATCGAAACTTCATAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACAGGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCACAAGTGAGTTTAAGGGAGAACAAAATCAGGGAAATGATGCAATATTTAGATACTAAAATGGGACAAGTGATTAAAATAAAGTTTGTGGTTTTTGTGACCGCGTTAAATGTGTTGGCTAATTTACTTCTTTCGGTAGATTTAATTGATTTT</genome_strand>
        <mrna_strand>ACCTG-TATATCATGTATTACTTAATCACTCCAATTCTTGTTTCTCTCGTTTTTGTAATCACTTTGAGATATTTCAATTCATCAAAAACAAAATTACCTCTTCCTCCAGGTCCATTTTCATGGCCATTTATTGGAAATCTTTTCCAAGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGTTAGCTCAATCTCATGGTCCTGATTTAATGTCCATAAGGTTCGGCACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCAGAGGTACTTAAAACACATGATCGTATGCTTTCTGGTCGTTTCGTTTCTCATCCCATCCGAGTTGAGGGATCGAAACTTCACAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACAGGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCGCAAGTAAGTTTAAGGGAGATGAAAATCAGGGAAATGATGCAATATTTAGATACTAAAAAGGGACAAGTGATTAAAATAAAGTTTGTGGTTTTTGTGACCGCGTTAAATGTGTTGGGTAATTTACTTCTTTCAGTAGATTTAATTGATTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E448747" ref_strand="+" ref_description="SGN-E448747 [cSTS-4-I2]">
      <seq>tgtatatcatgtattacttaatcactccaattcttgtttctctcgtttttgtaatcactttgagatatttcaattcatcaaaaacaaaattacctcttcctccaggtccattttcatggccatttattggaaatcttttccaagttggtagaaaacgtcctcatgcttctctagcaaagttagctcaatctcatggtcctgatttaatgtccataaggttcggcacacgtctcgtggtcgtagcctcatcccctgcagctgctgcagaggtacttaaaacacatgatcgtatgctttctggtcgtttcgtttctcatcccatccgagttgagggatcgaaacttcacaatgtgtcaactgcttttttagaagagtgtgatgagaattggaaaaacgttcgaactatatacaggggagccctgttttctaacaaagcattggaatcgcaagtaagtttaagggagatgaaaatcagggaaatgatgcaatatttagatactaaaaagggacaagtgattaaaataaagtttgtggtttttgtgaccgcgttaaatgtgttgggtaatttacttctttcagtagatttaattgattatgaaggaaagggaattggtgncagactaagtgagtacttacgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57352" stop="58589"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57651" g_stop="58289" g_length="639"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="639" r_length="639" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E448747" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E448747" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57651" e_stop="58289"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGTATGATGTATTACTTAATAACTCCAATTCTTCTTTCTCTCGTTTTTGTAATCACTTTGAGATATTTCTATCGATCAAAAACAAAATTACCGCTTCCTCCAGGTCCATTTTCATGGCCCTTTATTGGAAATCTTTTCCATGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGCTAGCTCAATCTCATGCTCCTGATTTAATGTCCTTAAGGTTCGGTACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCTGCGGTTCTTAAAACACATGATCGTTTGCTTTCTGGTCGTTTCGTTTCTCATCCCATACGAGTTGAGGGATCGAAACTTCATAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACAGGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCACAAGTGAGTTTAAGGGAGAACAAAATCAGGGAAATGATGCAATATTTAGATACTAAAATGGGACAAGTGATTAAAATAAAGTTTGTGGTTTTTGTGACCGCGTTAAATGTGTTGGCTAATTTACTTCTTTCGGTAGATTTAATTGATTTTGAAGGAAAGGGAATTGGTGCAGGATTAACAGAGTACTTGCGTA</genome_strand>
        <mrna_strand>TGTATATCATGTATTACTTAATCACTCCAATTCTTGTTTCTCTCGTTTTTGTAATCACTTTGAGATATTTCAATTCATCAAAAACAAAATTACCTCTTCCTCCAGGTCCATTTTCATGGCCATTTATTGGAAATCTTTTCCAAGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGTTAGCTCAATCTCATGGTCCTGATTTAATGTCCATAAGGTTCGGCACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCAGAGGTACTTAAAACACATGATCGTATGCTTTCTGGTCGTTTCGTTTCTCATCCCATCCGAGTTGAGGGATCGAAACTTCACAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACAGGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCGCAAGTAAGTTTAAGGGAGATGAAAATCAGGGAAATGATGCAATATTTAGATACTAAAAAGGGACAAGTGATTAAAATAAAGTTTGTGGTTTTTGTGACCGCGTTAAATGTGTTGGGTAATTTACTTCTTTCAGTAGATTTAATTGATTATGAAGGAAAGGGAATTGGTGNCAGACTAAGTGAGTACTTACGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E463703" ref_strand="+" ref_description="SGN-E463703 [cPRO-15-D4]">
      <seq>atcatgtattacttaatcactccaattcttgtttctctcgtttttgtaatcactttgagatatttcaattcatcaaaaacaaaattacctcttcctccaggtccattttcatggccatttattggaaatcttttccaagttggtagaaaacgtcctcatgcttctctagcaaagttagctcaatctcatggtcctgatttaatgtccataaggttcggcacacgtctcgtggtcgtagcctcatcccctgcagctgctgcagaggtacttaaaacacatgatcgtatgctttctggtcgtttcgtttctcatcccatccgagttgagggatcgaaacttcacaatgtgtcaactgcttttttagaagagtgtgatgagaattggaaaaacgttcgaactatatacagggggagccctgttttctaacaaagcattggaatcgcaagtaagttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57356" stop="58408"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57656" g_stop="58108" g_length="453"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="454" r_length="454" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E463703" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>453</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E463703" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57656" e_stop="58108"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGATGTATTACTTAATAACTCCAATTCTTCTTTCTCTCGTTTTTGTAATCACTTTGAGATATTTCTATCGATCAAAAACAAAATTACCGCTTCCTCCAGGTCCATTTTCATGGCCCTTTATTGGAAATCTTTTCCATGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGCTAGCTCAATCTCATGCTCCTGATTTAATGTCCTTAAGGTTCGGTACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCTGCGGTTCTTAAAACACATGATCGTTTGCTTTCTGGTCGTTTCGTTTCTCATCCCATACGAGTTGAGGGATCGAAACTTCATAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACA-GGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCACAAGTGAGTTTA</genome_strand>
        <mrna_strand>ATCATGTATTACTTAATCACTCCAATTCTTGTTTCTCTCGTTTTTGTAATCACTTTGAGATATTTCAATTCATCAAAAACAAAATTACCTCTTCCTCCAGGTCCATTTTCATGGCCATTTATTGGAAATCTTTTCCAAGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGTTAGCTCAATCTCATGGTCCTGATTTAATGTCCATAAGGTTCGGCACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCAGAGGTACTTAAAACACATGATCGTATGCTTTCTGGTCGTTTCGTTTCTCATCCCATCCGAGTTGAGGGATCGAAACTTCACAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACAGGGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCGCAAGTAAGTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E437424" ref_strand="+" ref_description="SGN-E437424 [cSTA-3-P17]">
      <seq>atgtattacttaatcactccaattcttgtttctctcgtttttgtaatcactttgagatatttcaattcatcaaaaacaaaattacctcttcctccaggtccattttcatggccatttattggaaatcttttccaagttggtagaaaacgtcctcatgcttctctagcaaagttagctcaatctcatggtcctgatttaatgtccataaggttcggcacacgtctcgtggtcgtagcctcatcccctgcagctgctgcagaggtacttaaaacacatgatcgtatgctttctggtcgtttcgtttctcatcccatccgagttgagggatcgaaacttcacaatgtgtcaactgcttttttagaagagtgtgatgagaattggaaaaacgttcgaactatatacaggggagccctgttttctaacaaagcattggaatcgcaagtaagtttaaaggagatgaaaatcaaggaaatgatgcaatatttagatactaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57359" stop="58454"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57659" g_stop="58154" g_length="496"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="496" r_length="496" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E437424" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E437424" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57659" e_stop="58154"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGTATTACTTAATAACTCCAATTCTTCTTTCTCTCGTTTTTGTAATCACTTTGAGATATTTCTATCGATCAAAAACAAAATTACCGCTTCCTCCAGGTCCATTTTCATGGCCCTTTATTGGAAATCTTTTCCATGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGCTAGCTCAATCTCATGCTCCTGATTTAATGTCCTTAAGGTTCGGTACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCTGCGGTTCTTAAAACACATGATCGTTTGCTTTCTGGTCGTTTCGTTTCTCATCCCATACGAGTTGAGGGATCGAAACTTCATAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACAGGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCACAAGTGAGTTTAAGGGAGAACAAAATCAGGGAAATGATGCAATATTTAGATACTAAAA</genome_strand>
        <mrna_strand>ATGTATTACTTAATCACTCCAATTCTTGTTTCTCTCGTTTTTGTAATCACTTTGAGATATTTCAATTCATCAAAAACAAAATTACCTCTTCCTCCAGGTCCATTTTCATGGCCATTTATTGGAAATCTTTTCCAAGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGTTAGCTCAATCTCATGGTCCTGATTTAATGTCCATAAGGTTCGGCACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCAGAGGTACTTAAAACACATGATCGTATGCTTTCTGGTCGTTTCGTTTCTCATCCCATCCGAGTTGAGGGATCGAAACTTCACAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACAGGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCGCAAGTAAGTTTAAAGGAGATGAAAATCAAGGAAATGATGCAATATTTAGATACTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E465835" ref_strand="+" ref_description="SGN-E465835 [cPRO-22-K14]">
      <seq>gtattacttaatcactccaattcttgtttctctcgcttttgtaatcactttgagatatttcaattcatcaaaaacaaaattacctcttcctccaggtccattttcatggccatttattggaaatcttttccaagttggtagaaaacgtcctcatgcttctctagcaaagttagctcaatctcatggtcctgatttaatgtccataaggttcggcacacgtctcgtggtcgtagcctcatcccctgcagctgctgcagaggtacttaaaacacatgatcgtatgctttctggtcgtttcgtatctcatcccatccgagttgagggatcgaaacttcacaatgtgtcaactgcttttttagaagagtgtgatgagaattggaaaaacgttcgaactatatacaggggagccctgttttctaacaaagcattggaatcgcgagtaagtttaagggagatgaaaatcagggaaatgatgcaatatttacatactaaaaagggacaagtgattaaaataaagtttgtggtttttgtgaccgcgttaaatgtgttggggaatttacttctttcagtagatttaattgattatgaatgaaagggaattggtgcaagactaagtgagtacttacgtaaatttacagaagcgggtggtatactggaattatcagatttgtatcctgttgtgagtattttctgtacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57361" stop="58657"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57661" g_stop="58357" g_length="697"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="697" r_length="697" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E465835" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E465835" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57661" e_stop="58357"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATTACTTAATAACTCCAATTCTTCTTTCTCTCGTTTTTGTAATCACTTTGAGATATTTCTATCGATCAAAAACAAAATTACCGCTTCCTCCAGGTCCATTTTCATGGCCCTTTATTGGAAATCTTTTCCATGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGCTAGCTCAATCTCATGCTCCTGATTTAATGTCCTTAAGGTTCGGTACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCTGCGGTTCTTAAAACACATGATCGTTTGCTTTCTGGTCGTTTCGTTTCTCATCCCATACGAGTTGAGGGATCGAAACTTCATAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACAGGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCACAAGTGAGTTTAAGGGAGAACAAAATCAGGGAAATGATGCAATATTTAGATACTAAAATGGGACAAGTGATTAAAATAAAGTTTGTGGTTTTTGTGACCGCGTTAAATGTGTTGGCTAATTTACTTCTTTCGGTAGATTTAATTGATTTTGAAGGAAAGGGAATTGGTGCAGGATTAACAGAGTACTTGCGTAAATTCACTGAGGCTGGTGGTATACTGGAGTTATCAGATTTGTATCCTGTTTTGGGTATTTTATGTACG</genome_strand>
        <mrna_strand>GTATTACTTAATCACTCCAATTCTTGTTTCTCTCGCTTTTGTAATCACTTTGAGATATTTCAATTCATCAAAAACAAAATTACCTCTTCCTCCAGGTCCATTTTCATGGCCATTTATTGGAAATCTTTTCCAAGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGTTAGCTCAATCTCATGGTCCTGATTTAATGTCCATAAGGTTCGGCACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCAGAGGTACTTAAAACACATGATCGTATGCTTTCTGGTCGTTTCGTATCTCATCCCATCCGAGTTGAGGGATCGAAACTTCACAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACAGGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCGCGAGTAAGTTTAAGGGAGATGAAAATCAGGGAAATGATGCAATATTTACATACTAAAAAGGGACAAGTGATTAAAATAAAGTTTGTGGTTTTTGTGACCGCGTTAAATGTGTTGGGGAATTTACTTCTTTCAGTAGATTTAATTGATTATGAATGAAAGGGAATTGGTGCAAGACTAAGTGAGTACTTACGTAAATTTACAGAAGCGGGTGGTATACTGGAATTATCAGATTTGTATCCTGTTGTGAGTATTTTCTGTACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E462044" ref_strand="+" ref_description="SGN-E462044 [cPRO-10-M10]">
      <seq>gtattacttaatcactccaattcttgtttctctcgtttttgtaatcactttgagatatttcaattcatcaaaaacaaaattacctcttcctccaggtccattttcatggccatttattggaaatcttttccaagttggtagaaaacgtcctcatgcttctctagcaaagttagctcaatctcatggtcctgatttaatgtccataaggttcggcacacgtctcgtggtcgtagcctcatcccctgcagctgctgcagaggtacttaaaacacatgatcgtatgctttctggtcgtttcgtttctcatcccatccgagttgagggatcgaaacttcacaatgtgtcaactgcttttttagaagagtgtgatgagaattggaaaaacgttcgaactatatacaggggagccctgttttctaacaaagcattggaatcgcaagtaagtttaagggagatgaaaatcagggaaatgatgcaatatttagatactaaaaagggacaagtgattaaaataaagtttgtggtttttgtgaccgcgttaaatgtgttgggtaatttacttctttcagtagatttaattgattatgaaggaaagggaattggtgcaagactaagtgagtacttacgtaaatttacagaggcgggtggtatactgggattatcagatttgtatcctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57361" stop="58637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57661" g_stop="58337" g_length="677"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="677" r_length="677" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E462044" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>677</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E462044" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57661" e_stop="58337"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATTACTTAATAACTCCAATTCTTCTTTCTCTCGTTTTTGTAATCACTTTGAGATATTTCTATCGATCAAAAACAAAATTACCGCTTCCTCCAGGTCCATTTTCATGGCCCTTTATTGGAAATCTTTTCCATGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGCTAGCTCAATCTCATGCTCCTGATTTAATGTCCTTAAGGTTCGGTACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCTGCGGTTCTTAAAACACATGATCGTTTGCTTTCTGGTCGTTTCGTTTCTCATCCCATACGAGTTGAGGGATCGAAACTTCATAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACAGGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCACAAGTGAGTTTAAGGGAGAACAAAATCAGGGAAATGATGCAATATTTAGATACTAAAATGGGACAAGTGATTAAAATAAAGTTTGTGGTTTTTGTGACCGCGTTAAATGTGTTGGCTAATTTACTTCTTTCGGTAGATTTAATTGATTTTGAAGGAAAGGGAATTGGTGCAGGATTAACAGAGTACTTGCGTAAATTCACTGAGGCTGGTGGTATACTGGAGTTATCAGATTTGTATCCTG</genome_strand>
        <mrna_strand>GTATTACTTAATCACTCCAATTCTTGTTTCTCTCGTTTTTGTAATCACTTTGAGATATTTCAATTCATCAAAAACAAAATTACCTCTTCCTCCAGGTCCATTTTCATGGCCATTTATTGGAAATCTTTTCCAAGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGTTAGCTCAATCTCATGGTCCTGATTTAATGTCCATAAGGTTCGGCACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCAGAGGTACTTAAAACACATGATCGTATGCTTTCTGGTCGTTTCGTTTCTCATCCCATCCGAGTTGAGGGATCGAAACTTCACAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACAGGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCGCAAGTAAGTTTAAGGGAGATGAAAATCAGGGAAATGATGCAATATTTAGATACTAAAAAGGGACAAGTGATTAAAATAAAGTTTGTGGTTTTTGTGACCGCGTTAAATGTGTTGGGTAATTTACTTCTTTCAGTAGATTTAATTGATTATGAAGGAAAGGGAATTGGTGCAAGACTAAGTGAGTACTTACGTAAATTTACAGAGGCGGGTGGTATACTGGGATTATCAGATTTGTATCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E544671" ref_strand="+" ref_description="SGN-E544671 [TUS-67-B24]">
      <seq>attacttaataactccaattcttctttctctcgtttttgtaatcactttgagatatttctatcgatcaaaaacaaaattaccgcttcctccaggtccattttcatggccctttattggaaatcttttccatgttggtagaaaacgtcctcatgcttctctagcaaagctagctcaatctcatgctcctgatttaatgtccttaaggttcggtacacgtctcgtggtcgtagcctcatcccctgcagctgctgctgcggttcttaaaacacatgatcgtttgctttctggtcgtttcgtttctcatcccatacgagttgagggatcgaaacttcataatgtgtcaactgcttttttagaagagtgtgatgagaattggaaaaacgttcgaactatatacaggggagccctgttttctaacaaagcattggaatcacaagtgagtttaagggagaacaaaatcagggaaatgatgcaatatttagatactaaaatgggacaagtgattaaaataaagtttgtggtttttgtgaccgcgttaaatgtgttggctaatttacttctttcggtagatttaattgattttgaaggaaagggaattggtgcaggattaacagagtacttgcgtaaattcactgaggctggtggtatactggagttatcagatttgtatcctgttttgggtattttatgtacggatttgcaggggacgtataagaaacttatcggtatgtttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57363" stop="58697"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57663" g_stop="58397" g_length="735"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="735" r_length="735" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E544671" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E544671" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57663" e_stop="58397"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTACTTAATAACTCCAATTCTTCTTTCTCTCGTTTTTGTAATCACTTTGAGATATTTCTATCGATCAAAAACAAAATTACCGCTTCCTCCAGGTCCATTTTCATGGCCCTTTATTGGAAATCTTTTCCATGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGCTAGCTCAATCTCATGCTCCTGATTTAATGTCCTTAAGGTTCGGTACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCTGCGGTTCTTAAAACACATGATCGTTTGCTTTCTGGTCGTTTCGTTTCTCATCCCATACGAGTTGAGGGATCGAAACTTCATAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACAGGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCACAAGTGAGTTTAAGGGAGAACAAAATCAGGGAAATGATGCAATATTTAGATACTAAAATGGGACAAGTGATTAAAATAAAGTTTGTGGTTTTTGTGACCGCGTTAAATGTGTTGGCTAATTTACTTCTTTCGGTAGATTTAATTGATTTTGAAGGAAAGGGAATTGGTGCAGGATTAACAGAGTACTTGCGTAAATTCACTGAGGCTGGTGGTATACTGGAGTTATCAGATTTGTATCCTGTTTTGGGTATTTTATGTACGGATTTGCAGGGGACGTATAAGAAACTTATCGGTATGTTTG</genome_strand>
        <mrna_strand>ATTACTTAATAACTCCAATTCTTCTTTCTCTCGTTTTTGTAATCACTTTGAGATATTTCTATCGATCAAAAACAAAATTACCGCTTCCTCCAGGTCCATTTTCATGGCCCTTTATTGGAAATCTTTTCCATGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGCTAGCTCAATCTCATGCTCCTGATTTAATGTCCTTAAGGTTCGGTACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCTGCGGTTCTTAAAACACATGATCGTTTGCTTTCTGGTCGTTTCGTTTCTCATCCCATACGAGTTGAGGGATCGAAACTTCATAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACAGGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCACAAGTGAGTTTAAGGGAGAACAAAATCAGGGAAATGATGCAATATTTAGATACTAAAATGGGACAAGTGATTAAAATAAAGTTTGTGGTTTTTGTGACCGCGTTAAATGTGTTGGCTAATTTACTTCTTTCGGTAGATTTAATTGATTTTGAAGGAAAGGGAATTGGTGCAGGATTAACAGAGTACTTGCGTAAATTCACTGAGGCTGGTGGTATACTGGAGTTATCAGATTTGTATCCTGTTTTGGGTATTTTATGTACGGATTTGCAGGGGACGTATAAGAAACTTATCGGTATGTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E562052" ref_strand="+" ref_description="SGN-E562052 [492]">
      <seq>attacttaatcactccaattcttctttctctcgtttttgttatcacttttcgatatttctatccatcaaaaacaaaattaccacttcccccaggtccattttcatggccatttattggaaatcttttccaagttggtagaaaacgtcctcatgcttctctagcaaagctagctcaatctcacggtcctgatttaatgtccataaggttcggcacacgtctcgtggtcgtagcctcatcccctgcagctgctgcagaggtacttaaaacacatgatcgtatgctttctggtcgtttcgtttctcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57363" stop="58267"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57663" g_stop="57967" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="305" r_length="305" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E562052" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>305</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E562052" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57663" e_stop="57967"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTACTTAATAACTCCAATTCTTCTTTCTCTCGTTTTTGTAATCACTTTGAGATATTTCTATCGATCAAAAACAAAATTACCGCTTCCTCCAGGTCCATTTTCATGGCCCTTTATTGGAAATCTTTTCCATGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGCTAGCTCAATCTCATGCTCCTGATTTAATGTCCTTAAGGTTCGGTACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCTGCGGTTCTTAAAACACATGATCGTTTGCTTTCTGGTCGTTTCGTTTCTCAT</genome_strand>
        <mrna_strand>ATTACTTAATCACTCCAATTCTTCTTTCTCTCGTTTTTGTTATCACTTTTCGATATTTCTATCCATCAAAAACAAAATTACCACTTCCCCCAGGTCCATTTTCATGGCCATTTATTGGAAATCTTTTCCAAGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGCTAGCTCAATCTCACGGTCCTGATTTAATGTCCATAAGGTTCGGCACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCAGAGGTACTTAAAACACATGATCGTATGCTTTCTGGTCGTTTCGTTTCTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E305998" ref_strand="+" ref_description="SGN-E305998 [cLEY-17-P1]">
      <seq>ttacttaataactccaattcttctttctctcgtttttgtggtcactttgagatatttctatcgatcaaaaacaaaattaccgcttcctccaggtccattttcatggccctttattggaaatcttttccatgttggtagaaaacgtcctcatgcttctctagcaaagctagctcaatctcatgctcctgatttaatgtccttaaggttcggtacacgtctcgtggtcgtagcctcatcccctgcagctgctgctgcggttcttaaaacacatgatcgtttgctttctggtcgtttcgtttctcatcccatacgagttgagggatcgaaacttcataatgtgtcaactgcttttttagaagagtgtgatgagaattggaaaaacgttcgaactatatacaggggagccctgttttctaacaaagcattggaatcacaagtgagtttaagggagaacaaaatcagggaaatgatgcaatatttagatactaaaatgggacaagtgattaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57364" stop="58473"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57664" g_stop="58173" g_length="510"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="510" r_length="510" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E305998" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>510</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E305998" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57664" e_stop="58173"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACTTAATAACTCCAATTCTTCTTTCTCTCGTTTTTGTAATCACTTTGAGATATTTCTATCGATCAAAAACAAAATTACCGCTTCCTCCAGGTCCATTTTCATGGCCCTTTATTGGAAATCTTTTCCATGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGCTAGCTCAATCTCATGCTCCTGATTTAATGTCCTTAAGGTTCGGTACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCTGCGGTTCTTAAAACACATGATCGTTTGCTTTCTGGTCGTTTCGTTTCTCATCCCATACGAGTTGAGGGATCGAAACTTCATAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACAGGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCACAAGTGAGTTTAAGGGAGAACAAAATCAGGGAAATGATGCAATATTTAGATACTAAAATGGGACAAGTGATTAAAAT</genome_strand>
        <mrna_strand>TTACTTAATAACTCCAATTCTTCTTTCTCTCGTTTTTGTGGTCACTTTGAGATATTTCTATCGATCAAAAACAAAATTACCGCTTCCTCCAGGTCCATTTTCATGGCCCTTTATTGGAAATCTTTTCCATGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGCTAGCTCAATCTCATGCTCCTGATTTAATGTCCTTAAGGTTCGGTACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCTGCGGTTCTTAAAACACATGATCGTTTGCTTTCTGGTCGTTTCGTTTCTCATCCCATACGAGTTGAGGGATCGAAACTTCATAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACAGGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCACAAGTGAGTTTAAGGGAGAACAAAATCAGGGAAATGATGCAATATTTAGATACTAAAATGGGACAAGTGATTAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E455686" ref_strand="+" ref_description="SGN-E455686 [cSTS-27-C9]">
      <seq>actccaattcttgtttctctcgtttttgtaatcacctttgagatatttcaattcatcaaaaacaaaattacctcttcctccaggtccattttcatggccatttattggaaatcttttccaagttggtagaaaacgtcctcatgcttctctagcaaagttagctcaatctcatggtcctgatttaatgtccataaggttcggcacacgtctcgtggtcgtagcctcatcccctgcagctgctgcagaggtacttaaaacacatgatcgtatgctttctggtcgtttcgtttctcatcccatccgagttgagggatcgaaacttcacaatgtgtcaactgcttttttagaagagtgtgatgagaattggaaaaacgttcgaactatatacaggggagccctgttttctaacaaagcattggaatcgcaagtaagtttaagggagatgaaaatcagggaaatgatgcaatatttagatactaaaaagggacaagtgattaaaataaagtttgtggtttttgtgaccgcgttaaatgtgttgggtaatttacttctttcagtagatttaattgattatgaaggaaagggaattggtgcaagactaagtgagtacttacgtaaatttacagagggcgggtggtatactggaattatcagatttgtatcctgttgtgggtattttctgtacggatttccaggggacttataagaaacttatgggtatttttgatactatttgcgctgtttggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57374" stop="58718"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57674" g_stop="58418" g_length="745"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="747" r_length="747" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E455686" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>745</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E455686" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57674" e_stop="58418"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTCCAATTCTTCTTTCTCTCGTTTTTGTAATCA-CTTTGAGATATTTCTATCGATCAAAAACAAAATTACCGCTTCCTCCAGGTCCATTTTCATGGCCCTTTATTGGAAATCTTTTCCATGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGCTAGCTCAATCTCATGCTCCTGATTTAATGTCCTTAAGGTTCGGTACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCTGCGGTTCTTAAAACACATGATCGTTTGCTTTCTGGTCGTTTCGTTTCTCATCCCATACGAGTTGAGGGATCGAAACTTCATAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACAGGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCACAAGTGAGTTTAAGGGAGAACAAAATCAGGGAAATGATGCAATATTTAGATACTAAAATGGGACAAGTGATTAAAATAAAGTTTGTGGTTTTTGTGACCGCGTTAAATGTGTTGGCTAATTTACTTCTTTCGGTAGATTTAATTGATTTTGAAGGAAAGGGAATTGGTGCAGGATTAACAGAGTACTTGCGTAAATTCACTGA-GGCTGGTGGTATACTGGAGTTATCAGATTTGTATCCTGTTTTGGGTATTTTATGTACGGATTTGCAGGGGACGTATAAGAAACTTATCGGTATGTTTGATACTATTTGTGCTGTTTGGG</genome_strand>
        <mrna_strand>ACTCCAATTCTTGTTTCTCTCGTTTTTGTAATCACCTTTGAGATATTTCAATTCATCAAAAACAAAATTACCTCTTCCTCCAGGTCCATTTTCATGGCCATTTATTGGAAATCTTTTCCAAGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGTTAGCTCAATCTCATGGTCCTGATTTAATGTCCATAAGGTTCGGCACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCAGAGGTACTTAAAACACATGATCGTATGCTTTCTGGTCGTTTCGTTTCTCATCCCATCCGAGTTGAGGGATCGAAACTTCACAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACAGGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCGCAAGTAAGTTTAAGGGAGATGAAAATCAGGGAAATGATGCAATATTTAGATACTAAAAAGGGACAAGTGATTAAAATAAAGTTTGTGGTTTTTGTGACCGCGTTAAATGTGTTGGGTAATTTACTTCTTTCAGTAGATTTAATTGATTATGAAGGAAAGGGAATTGGTGCAAGACTAAGTGAGTACTTACGTAAATTTACAGAGGGCGGGTGGTATACTGGAATTATCAGATTTGTATCCTGTTGTGGGTATTTTCTGTACGGATTTCCAGGGGACTTATAAGAAACTTATGGGTATTTTTGATACTATTTGCGCTGTTTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E465160" ref_strand="+" ref_description="SGN-E465160 [cPRO-20-C20]">
      <seq>ccaattcttctttctctcgtttttgtaatcactttgagatatttcaattcatcaaaaacaaaattaccacttcctccaggtccattttcattgccatttattggaaatattttccaagttggtagaaaacgtcctcatgcttctctagcaaagctagctcaatctcacggtcctgatttaatgtccataaggttcggcacacgtctcgtggttgtagcctcatcccctgcagctgctgcagaggtacttaaaacacatgatcgtatgctttctggtcgtttcgtttctcatcccatccgagttgagggatcgaaacttcacaatgtgtcaactgcttttttagaagagtgtgatgagaattggaaaaacgttcgaactatatacaggggagccctgttttctaacaaagcattggaatcacaagtaagtttaagggagatgaaaatcagggaaatgatgcaatatttagatactaaaaagggacaagtgattaaaataaagtttgtggtctttgtgaccgcgttaaatgtgttgggtaatttacttctttcagtagatttaattgattatgaaggaaagggaattggtgcaagactaagtgagtacttacgtaaatttacagaagcgggtggtatactggaattatcagatttgtatcctgttttgggtattttctatacggatttccaggggactttatagaaacttatggggatgtttgatactatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57377" stop="58707"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57677" g_stop="58407" g_length="731"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="731" r_length="731" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E465160" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>731</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E465160" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57677" e_stop="58407"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAATTCTTCTTTCTCTCGTTTTTGTAATCACTTTGAGATATTTCTATCGATCAAAAACAAAATTACCGCTTCCTCCAGGTCCATTTTCATGGCCCTTTATTGGAAATCTTTTCCATGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGCTAGCTCAATCTCATGCTCCTGATTTAATGTCCTTAAGGTTCGGTACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCTGCGGTTCTTAAAACACATGATCGTTTGCTTTCTGGTCGTTTCGTTTCTCATCCCATACGAGTTGAGGGATCGAAACTTCATAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACAGGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCACAAGTGAGTTTAAGGGAGAACAAAATCAGGGAAATGATGCAATATTTAGATACTAAAATGGGACAAGTGATTAAAATAAAGTTTGTGGTTTTTGTGACCGCGTTAAATGTGTTGGCTAATTTACTTCTTTCGGTAGATTTAATTGATTTTGAAGGAAAGGGAATTGGTGCAGGATTAACAGAGTACTTGCGTAAATTCACTGAGGCTGGTGGTATACTGGAGTTATCAGATTTGTATCCTGTTTTGGGTATTTTATGTACGGATTTGCAGGGGACGTATAAGAAACTTATCGGTATGTTTGATACTATTTG</genome_strand>
        <mrna_strand>CCAATTCTTCTTTCTCTCGTTTTTGTAATCACTTTGAGATATTTCAATTCATCAAAAACAAAATTACCACTTCCTCCAGGTCCATTTTCATTGCCATTTATTGGAAATATTTTCCAAGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGCTAGCTCAATCTCACGGTCCTGATTTAATGTCCATAAGGTTCGGCACACGTCTCGTGGTTGTAGCCTCATCCCCTGCAGCTGCTGCAGAGGTACTTAAAACACATGATCGTATGCTTTCTGGTCGTTTCGTTTCTCATCCCATCCGAGTTGAGGGATCGAAACTTCACAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACAGGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCACAAGTAAGTTTAAGGGAGATGAAAATCAGGGAAATGATGCAATATTTAGATACTAAAAAGGGACAAGTGATTAAAATAAAGTTTGTGGTCTTTGTGACCGCGTTAAATGTGTTGGGTAATTTACTTCTTTCAGTAGATTTAATTGATTATGAAGGAAAGGGAATTGGTGCAAGACTAAGTGAGTACTTACGTAAATTTACAGAAGCGGGTGGTATACTGGAATTATCAGATTTGTATCCTGTTTTGGGTATTTTCTATACGGATTTCCAGGGGACTTTATAGAAACTTATGGGGATGTTTGATACTATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E589911" ref_strand="+" ref_description="SGN-E589911 [43495]">
      <seq>ccgagttgagggatcgaaacttcacaatgtgtcaactgcttttttagaagagtgtgatgagaattggaaaaacgttcgaactatatacaggggagccctgttttctaacaaagcattggaatcacaagtaagtttaagggagatgaaaatcagggaaatgatgcaatatttagatactaaaaagggacaagtgattaaaataaagtttgtggtttttgtgaccgcgttaaatgtgttgggtaatttacttctttcagtagatttaattgattatgaaggaaagggaattggtgcaagactaagtgagtacttgcgtaaatttacagaggcgggtaatatactggaattatcagatttgtttcctgttttgggtattttctgtacggatttccaggggacttataagaaaattatgggtatgtttgatattatgtgcgctgtttggggagacattgttcaggacaaaataaaaagagatagtttggatgctgtagattttgtagatgctttggttaaaaatggcttcactgataaacatgtcaatgcattgcttgtggaaatatttggagctggaacagaatctacgactgctacgagtgaatggatgcttgtagaactccttagaaatccacaagccttacaaaaactccgtgatgaaatatcacaagtagtaggaggaggtaagggcattataaaggaatccgatttgccaatgcttaccatacttggacgcttgttttaaagagacactaaggttgcatcctcctgggaccgttgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="57674" stop="59151"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57973" g_stop="58537" g_length="565"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="556" r_length="556" r_score="0.924"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58538" i_stop="58630" i_length="93">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58631" g_stop="58851" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="557" r_stop="779" r_length="223" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E589911" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>786</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E589911" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57973" e_stop="58537"/>
          <exon e_start="58631" e_stop="58851"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAGTTGAGGGATCGAAACTTCATAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACAGGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCACAAGTGAGTTTAAGGGAGAACAAAATCAGGGAAATGATGCAATATTTAGATACTAAAATGGGACAAGTGATTAAAATAAAGTTTGTGGTTTTTGTGACCGCGTTAAATGTGTTGGCTAATTTACTTCTTTCGGTAGATTTAATTGATTTTGAAGGAAAGGGAATTGGTGCAGGATTAACAGAGTACTTGCGTAAATTCACTGAGGCTGGTGGTATACTGGAGTTATCAGATTTGTATCCTGTTTTGGGTATTTTATGTACGGATTTGCAGGGGACGTATAAGAAACTTATCGGTATGTTTGATACTATTTGTGCTGTTTGGGGAGACATTGTTCAGGACAAAAGAAAAAGAGACAGTCAACCTTCATTGGATTCTGTAGATTTCGTAGATGCTTTGGTTAAAAATGGTTTCACTGATAAACATGTCAATGCATTGCTTTTGGTACGTCACTCAACTAATAATTATTATTTTTCAATTAAGGAAAATGATTTTATGATAATTTAGTAATTGTTCTCTATGTCTTTGATCTTTTAGGAAATATTTGCAGCTGGGACAGAATCTACGACTGCTACGAGTGAATGGATGCTAGTAGAACTCCTAAGAAAACCACAAGCCTTACAAAAACTCCGCGATGAAATATCACAAGTAGTAGGAGGAAGTAAGGGCATTATAAAGGAATCCGACTTGCCAA-GCTTACCATACTTGGACGCTTGTTTTAAAGAGACACTAAGGTTGCATCCTCCT-GGACCGTTGTT</genome_strand>
        <mrna_strand>CCGAGTTGAGGGATCGAAACTTCACAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACAGGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCACAAGTAAGTTTAAGGGAGATGAAAATCAGGGAAATGATGCAATATTTAGATACTAAAAAGGGACAAGTGATTAAAATAAAGTTTGTGGTTTTTGTGACCGCGTTAAATGTGTTGGGTAATTTACTTCTTTCAGTAGATTTAATTGATTATGAAGGAAAGGGAATTGGTGCAAGACTAAGTGAGTACTTGCGTAAATTTACAGAGGCGGGTAATATACTGGAATTATCAGATTTGTTTCCTGTTTTGGGTATTTTCTGTACGGATTTCCAGGGGACTTATAAGAAAATTATGGGTATGTTTGATATTATGTGCGCTGTTTGGGGAGACATTGTTCAGGACAAAATAAAAAGAG--A-T--A--GT--TTGGATGCTGTAGATTTTGTAGATGCTTTGGTTAAAAATGGCTTCACTGATAAACATGTCAATGCATTGCTTGTG.............................................................................................GAAATATTTGGAGCTGGAACAGAATCTACGACTGCTACGAGTGAATGGATGCTTGTAGAACTCCTTAGAAATCCACAAGCCTTACAAAAACTCCGTGATGAAATATCACAAGTAGTAGGAGGAGGTAAGGGCATTATAAAGGAATCCGATTTGCCAATGCTTACCATACTTGGACGCTTGTTTTAAAGAGACACTAAGGTTGCATCCTCCTGGGACCGTTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E544670" ref_strand="+" ref_description="SGN-E544670 [TUS-67-B24](-)">
      <seq>tggatgctagtagaactcctaagaaaaccacaagctttacaaaaactccgcgatgaaatatcacaagtagtaggaggaagtaagggcattataaaggaatccgacttgccaagcttaccatacttggacgcttgttttaaagagacactaaggttgcatcctcctggaccgttgttgctccctcatcgtgcagtgcaaacatgtgaagtgatggggtacagaattcccagaaacactcaagtgttggttaatatgtgggcaattgcaagggattctaagatttgggacgatccttcgagctttaaacctgaaagatttatcaattcaaaattcgacaacaaagggcaaaagtttgagtatattccttttggttcggggagaagaatatgtgctggagaacccttggcttcgaggtttattccgttagctgttgcttcattgatccataagttcgattggattctgccaaatgaaatagatccagctaagattaacatggatgaggtattggatgtcaccatgtttaagaaagattcacttcttgttattcctaaattgcggaatgtgtgagggatcgatgatcactatgttgtaaaatatccattatcattatgttgatgttcatgttgtgtgtctatgaattatatattgtgtcaaatttaagtccttaattgtctctgaataacttccaagatataaaacttcttgtggtacagtgaagatgttatttctcttgttttaaaactctttcctccaacaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="58376" stop="59746"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58676" g_stop="59436" g_length="761"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="761" r_length="761" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="762" polyA_stop="778"/>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E544670" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>761</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E544670" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58676" e_stop="59436"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGATGCTAGTAGAACTCCTAAGAAAACCACAAGCCTTACAAAAACTCCGCGATGAAATATCACAAGTAGTAGGAGGAAGTAAGGGCATTATAAAGGAATCCGACTTGCCAAGCTTACCATACTTGGACGCTTGTTTTAAAGAGACACTAAGGTTGCATCCTCCTGGACCGTTGTTGCTCCCTCATCGTGCAGTGCAAACATGTGAAGTGATGGGGTACAGAATTCCCAGAAACACTCAAGTGTTGGTTAATATGTGGGCAATTGCAAGGGATTCTAAGATTTGGGACGATCCTTCGAGCTTTAAACCTGAAAGATTTATCAATTCAAAATTCGACAACAAAGGGCAAAAGTTTGAGTATATTCCTTTTGGTTCGGGGAGAAGAATATGTGCTGGAGAACCCTTGGCTTCGAGGTTTATTCCGTTAGCTGTTGCTTCATTGATCCATAAGTTCGATTGGATTCTGCCAAATGAAATAGATCCAGCTAAGATTAACATGGATGAGGTATTGGATGTCACCATGTTTAAGAAAGATTCACTTCTTGTTATTCCTAAATTGCGGAATGTGTGAGGGATCGATGATCACTATGTTGTAAAATATCCATTATCATTATGTTGATGTTCATGTTGTGTGTCTATGAATTATATATTGTGTCAAATTTAAGTCCTTAATTGTCTCTGAATAACTTCCAAGATATAAAACTTCTTGTGGTACAGTGAAGATGTTATTTCTCTTGTTTTAAAACTCTTTCCTACAACAAA</genome_strand>
        <mrna_strand>TGGATGCTAGTAGAACTCCTAAGAAAACCACAAGCTTTACAAAAACTCCGCGATGAAATATCACAAGTAGTAGGAGGAAGTAAGGGCATTATAAAGGAATCCGACTTGCCAAGCTTACCATACTTGGACGCTTGTTTTAAAGAGACACTAAGGTTGCATCCTCCTGGACCGTTGTTGCTCCCTCATCGTGCAGTGCAAACATGTGAAGTGATGGGGTACAGAATTCCCAGAAACACTCAAGTGTTGGTTAATATGTGGGCAATTGCAAGGGATTCTAAGATTTGGGACGATCCTTCGAGCTTTAAACCTGAAAGATTTATCAATTCAAAATTCGACAACAAAGGGCAAAAGTTTGAGTATATTCCTTTTGGTTCGGGGAGAAGAATATGTGCTGGAGAACCCTTGGCTTCGAGGTTTATTCCGTTAGCTGTTGCTTCATTGATCCATAAGTTCGATTGGATTCTGCCAAATGAAATAGATCCAGCTAAGATTAACATGGATGAGGTATTGGATGTCACCATGTTTAAGAAAGATTCACTTCTTGTTATTCCTAAATTGCGGAATGTGTGAGGGATCGATGATCACTATGTTGTAAAATATCCATTATCATTATGTTGATGTTCATGTTGTGTGTCTATGAATTATATATTGTGTCAAATTTAAGTCCTTAATTGTCTCTGAATAACTTCCAAGATATAAAACTTCTTGTGGTACAGTGAAGATGTTATTTCTCTTGTTTTAAAACTCTTTCCTCCAACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E266086" ref_strand="-" ref_description="SGN-E266086 [cLEI-6-I22]">
      <seq>attcccagaaacactcaagtgttggttaatatgtgggcaattgcaagggattctaagatttgggacgatccttcgagctttaaacctgaaagatttatcaattcaaaattcgacaacaaagggcaaaagtttgagtatattccttttggttcggggagaagaatatgtgctggagaacccttggcttcgaggtttattccgttagctgttgcttcattgatccataagttcgattggattttgccaaatcaaatagatccagctaagattaacatggatgaggtattggatgtcaccatgtttaagaaagattcacttcttgttattcctaaattgcggaatgtgtgagggatcgatgatcactatgttgtaaaatatccattatcattatgttgatgttcatgttgtgtgtctatgaattatatattgtgtcaaatttaagtccttaattgtctctgaataacttccaagatataaaacttcttgtggtacagtgaaaaaaaaaaaaaaaaaactcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="58598" stop="59697"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58898" g_stop="59396" g_length="499"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="499" r_length="499" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="500" polyA_stop="515"/>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E266086" ref_strand="-">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>499</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E266086" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="58898" e_stop="59396"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCCCAGAAACACTCAAGTGTTGGTTAATATGTGGGCAATTGCAAGGGATTCTAAGATTTGGGACGATCCTTCGAGCTTTAAACCTGAAAGATTTATCAATTCAAAATTCGACAACAAAGGGCAAAAGTTTGAGTATATTCCTTTTGGTTCGGGGAGAAGAATATGTGCTGGAGAACCCTTGGCTTCGAGGTTTATTCCGTTAGCTGTTGCTTCATTGATCCATAAGTTCGATTGGATTCTGCCAAATGAAATAGATCCAGCTAAGATTAACATGGATGAGGTATTGGATGTCACCATGTTTAAGAAAGATTCACTTCTTGTTATTCCTAAATTGCGGAATGTGTGAGGGATCGATGATCACTATGTTGTAAAATATCCATTATCATTATGTTGATGTTCATGTTGTGTGTCTATGAATTATATATTGTGTCAAATTTAAGTCCTTAATTGTCTCTGAATAACTTCCAAGATATAAAACTTCTTGTGGTACAGTGAAG</genome_strand>
        <mrna_strand>ATTCCCAGAAACACTCAAGTGTTGGTTAATATGTGGGCAATTGCAAGGGATTCTAAGATTTGGGACGATCCTTCGAGCTTTAAACCTGAAAGATTTATCAATTCAAAATTCGACAACAAAGGGCAAAAGTTTGAGTATATTCCTTTTGGTTCGGGGAGAAGAATATGTGCTGGAGAACCCTTGGCTTCGAGGTTTATTCCGTTAGCTGTTGCTTCATTGATCCATAAGTTCGATTGGATTTTGCCAAATCAAATAGATCCAGCTAAGATTAACATGGATGAGGTATTGGATGTCACCATGTTTAAGAAAGATTCACTTCTTGTTATTCCTAAATTGCGGAATGTGTGAGGGATCGATGATCACTATGTTGTAAAATATCCATTATCATTATGTTGATGTTCATGTTGTGTGTCTATGAATTATATATTGTGTCAAATTTAAGTCCTTAATTGTCTCTGAATAACTTCCAAGATATAAAACTTCTTGTGGTACAGTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E577888" ref_strand="+" ref_description="SGN-E577888 [LE08BA01]">
      <seq>ctacatctcctaccatacaatgcttcaaatggagccatatcaatgcttgattgatagctattattgtatgaaaactccgctaagggtaggaagctatcccaatgaccaccaaactctatcacacacgcacgaagcatattctccaacacttgaatcgttcgctcagactgaccatcgggagaactagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70235" stop="71012"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70535" g_stop="70711" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E577888" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>177</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E577888" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70535" e_stop="70711"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACATATCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGAGTGATAGCTATTATTGTATGAAAACTCCGTTAAGGGTAAGAAGTTATCCCAATGGCCACCAAATTCTATCACACATGCACGAAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</genome_strand>
        <mrna_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGATTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATTCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E379315" ref_strand="+" ref_description="SGN-E379315 [TUS-1-J2]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttncactgccggtagcctatgcacatccgaaaactccaatccttcttctttacaaacaaaaccggagcaccccaaggagatgcagttggtctaatgaagcctttgctcacaactctttgaagtggtcttttaactctcttaactctgcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71719" stop="73031"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72019" g_stop="72731" g_length="713"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="712" r_length="712" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E379315" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E379315" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72019" e_stop="72731"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGAGAAATCGGCCGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGAATCCACCATCACTCCATCCTTAGAAACCACGTGTCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATTACAAAGAGATCCAGATATGGCTTAAAAATCCCGTTCATCAAGCTCATAAATGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAGTCGGATCTCAAGTCAATCTTAGAGAAAACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGTGGATACTTGTTCTTAATAGTTACCTTTTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTTCCATCCTTCTTCTTCACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTTATGAAGCCTTTGCTCAACAACT-TTTGAAGTTGGGTCTTTAACTCTCTTAACTCCGCGG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTNCACTGCCGGTAGCCTATGCACATCCGAAAACTCCAATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCAGTTGGTCTAATGAAGCCTTTGCTC-ACAACTCTTTGAAG-TGGTCTTTTAACTCTCTTAACTCTGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E375319" ref_strand="+" ref_description="SGN-E375319 [TUS-15-F18]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttcaactgccggtagcctatgcacatccgaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71719" stop="72914"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72019" g_stop="72614" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E375319" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E375319" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72019" e_stop="72614"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGAGAAATCGGCCGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGAATCCACCATCACTCCATCCTTAGAAACCACGTGTCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATTACAAAGAGATCCAGATATGGCTTAAAAATCCCGTTCATCAAGCTCATAAATGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAGTCGGATCTCAAGTCAATCTTAGAGAAAACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGTGGATACTTGTTCTTAATAGTTACCTTTTTCAACTGCCGGTAGTCTATGCACATCCGAAAAC</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGCCTATGCACATCCGAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E204434" ref_strand="+" ref_description="SGN-E204434 [cLEC-13-J16]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71719" stop="72844"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72019" g_stop="72544" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E204434" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E204434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72019" e_stop="72544"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGAGAAATCGGCCGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGAATCCACCATCACTCCATCCTTAGAAACCACGTGTCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATTACAAAGAGATCCAGATATGGCTTAAAAATCCCGTTCATCAAGCTCATAAATGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAGTCGGATCTCAAGTCAATCTTAGAGAAAACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E368762" ref_strand="+" ref_description="SGN-E368762 [TUS-22-P2]">
      <seq>gtctcacccaattcttcactgtctcaatcttacaaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagagtatatcagtatatcatcaataaacatgatgacaaagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagagaagacacaagcaccttgtaactgatcgaacaagtcatcaatgcgaggaagtggatacttgttcttaatagttaccttgttcaactgccggtagtctatgcacatccgaaaactcccatccttcttcttcacaaaccaaaccggagcaccccaaggagatgcacttggtctaatgaagactttgctcaaaaactcttgaagttgggcctttaactctcttaactccgcgggagccattctataagggggtatagaaatggggcgagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71790" stop="73069"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72090" g_stop="72769" g_length="680"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="679" r_length="679" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E368762" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E368762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72090" e_stop="72769"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGAATCCACCATCACTCCATCCTTAGAAACCACGTGTCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATTACAAAGAGATCCAGATATGGCTTAAAAATCCCGTTCATCAAGCTCATAAATGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAGTCGGATCTCAAGTCAATCTTAGAGAAAACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGTGGATACTTGTTCTTAATAGTTACCTTTTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTTCCATCCTTCTTCTTCACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTTATGAAGCCTTTGCTCAACAACTTTTGAAGTTGGGTCTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTG</genome_strand>
        <mrna_strand>GTCTCACCCAATTCTTCACTGTCTCAATCTTACAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTATCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGTATATCAGTATATCATCAATAAACATGATGACAAAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGTGGATACTTGTTCTTAATAGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTCACAAACCAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACTTTGCTCAAAAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E240817" ref_strand="+" ref_description="SGN-E240817 [cLED-24-J5]">
      <seq>gtctcacccatttcttcactgtctcaatcttaccaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagaggatatcagtatatcatcaatgaacatgatgacgcagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71790" stop="72748"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72090" g_stop="72448" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="358" r_length="358" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E240817" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>359</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E240817" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72090" e_stop="72448"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGAATCCACCATCACTCCATCCTTAGAAACCACGTGTCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATTACAAAGAGATCCAGATATGGCTTAAAAATCCCGTTCATCAAGCTCATAAATGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCGAAAAGCAGTCTTTGGCACA</genome_strand>
        <mrna_strand>GTCTCACCCATTTCTTCACTGTCTCAATCTTACCAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTATCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGGATATCAGTATATCATCAATGAACATGATGACGCAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E352716" ref_strand="+" ref_description="SGN-E352716 [cTOS-11-H19]">
      <seq>gatctgtcccaggcttggctaacgtcacagttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaagtctacataagtattgctccccacaaaagtcaccagaccagacctatatactttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagcaattcataatttaatttaagaccagtagcaaatgaggaagatacatatgaaaatgtggatccagggtcaaataatacaaaagccatgcaatcacaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72711" stop="73641"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73011" g_stop="73341" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E352716" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352716" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73011" e_stop="73341"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTGTCCCAGATTTTGCTAATGTCACAGTCTTAGTATTACAATCCAAGATCGCAAAATTCGGAGAAAGCCAAGTCATACCCAAAATTACATCAAAGTCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTACTCCCCACAAAAGTCACCAAACAAGACCTATACACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGTAATTCACAATGTAAATTAAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAA</genome_strand>
        <mrna_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCATAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCACAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355114" ref_strand="+" ref_description="SGN-E355114 [cTOS-18-B12]">
      <seq>ttaggttcgttggtctcatcacacaagaacaggtctagtagagtctttaggaacggtagggggacgcctttacttttctttgagaggctataagactttaggaaaatttcaccctttcattctttctttcgtgctactacttgagtccaattggtatctaggcgatacaaattggtatctgaccatcttcactctcttttgcagatggttagaactagagcaacgaccacgtcaacaccaacaccggccagacaagaaacaactgagccagccactggggctgtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="-" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="75294" stop="74409"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74994" g_stop="74709" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="-" ref_id="SGN-E355114" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>286</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355114" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74994" e_stop="74709"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACGAGTCTTGTAGAGTCTTAAGGAACGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGACTTTAGGAAAATTTCATTCTTTCTTTCTTTCTTTCGTGCTACTACTTGAATTTAATTGGTATCTAGGTGATACAAATTGGTATCTGACCATCTTCACTCTATTTCGCAGATGGTTAGAACTAGAGCAACGACTGCGCCAACACCAACACCGGCAAGACAAGAAACGTCTGAGCCAGCCACTGGGGTTGTGG</genome_strand>
        <mrna_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTTAGGAACGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGACTTTAGGAAAATTTCACCCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACAAATTGGTATCTGACCATCTTCACTCTCTTTTGCAGATGGTTAGAACTAGAGCAACGACCACGTCAACACCAACACCGGCCAGACAAGAAACAACTGAGCCAGCCACTGGGGCTGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E349726" ref_strand="+" ref_description="SGN-E349726 [cTOS-3-C5]">
      <seq>tagtcttcggtggaggtaggttattgtttctcttacgatattcgtagtaaactcttaatagagaatgatatgtattgataatattgtaaaccctgctatgtgcttaattgtatgcttgcatgaatgtaactatataattgttattatataagcatgatgaagttattgaatcccaaatcttgtaaaaacctaatctctttttaatgatgatgccttggtaagggagaaggcttgatgaactaaagtaatgagattgatgatgccttggtaagggagaaggcttgatgaattgatagaatgagattaggggatcgggtgtcacgaactgacacgtagaattaggggatcgggtgtcacaaaccgacacgtagattaagggatcaggtgtcacgaaccaacacatagattaggggatcgggtgtcacgaaccgacacgtagatttaggggatcgggtgtcacgaaccgacacgtagatttaggggatcgggtgtcacgaaccgacacgtagatttaggggatcaggtgtcacgaaccgacacgtagatttaggggatcggagtgtcacgttccgacacgtagatttaggggatcagagtatcacgtaccgacacaagaagattaatgaatatganggagcggaatgtcacgtaccgacacaagagaaataaagacaatgaatcttgaaagatgttatatactcaatctaatgaacataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="-" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="96687" stop="75346"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86093" g_stop="85724" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="371" r_length="371" r_score="0.900"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85723" i_stop="75996" i_length="9728">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75995" g_stop="75646" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="717" r_length="346" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="-" ref_id="SGN-E349726" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349726" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86093" e_stop="85724"/>
          <exon e_start="75995" e_stop="75646"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATCTTCGGTGGAGGTAGGTTA-TGATT-T-TTATGTTATTCGTAGTAAACTCTTAATAGTGAATGATATGTATTGGTAGTATTGTAAACCCTGCTATATGCTTAATTATATGCTTGCATGAATGTGATTATATGATTGTGATCAAATAAGCATGATGAAGCTATTGAATCCCAAATCTTGATAAAAACCTAATCTCTTTGTTAATGATGATGCCTTGGTATAAAAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAGAAAGAAGGCTTGATGAATTAATAGAATGAGATTAGTGGGGCGGGTGTCACGAACTGACACATAGAATTAGGGGATCGGGTGTCACGAACCGATACGTAGATTTAGGGGATCGTGTGTCACAAACCGACACGTAGATTTAGTGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGAGTGTCACGTTCTGACACATAGTAGTAGGGGATTGGAGTGTCACGTACCGACACAAGAGGAATAAAGATAATGAATCTCGAAAGATATTAATATACTCAATCTAATGAATCTAATTCCCAAATGAGTATGGTACTGAGGCTTGAGTCCTCATGTGTGAACTTGGTGGTACTTGGTAATGATTATAGTACTTGTTGTTGCTACATGTTGAGTATTGTAGTCGATTTATGATATTACTTGATATATACTGTTTTCTATTTTGAGTTGGCCGATGATACCTACTCAGTACTTGTGTTTGTACTGACCCCTACTTTTATGTTTTCTTCTTTGTTAATTGTGGAGTGCAGCAAACGGACCGTCGTCTTCAACTCAACCGTAACTCTAGTCAGTCTTCATTACTCCGGATATCAGGGTGAGCTAATGCTTCTAGCTTGGACTGGATCTTCCTCTTCATGTCTTGATGCCTTGAAGTTCCGGCATGGACTAGCTTTTTATGTATTTTAGTTTCTTAGATATTCTTAGTTTAGTAATTTGATGATAGATGTTCTTGTGGTGATGACTTTCAGATTTTGGGGAATAATAGATGTTGAATTTTAGAAGTTATTGAATTGGTTTTTATTAATGAGTTTAAGTATTCCGCATTACTTTATGTTGATATTATATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCTAGTCGCGGCTCCGATTTGGGTCGTGACATTAGATCTTGCATGCTTCAATATATTATTAATTTACTATCCTCCCTCTTTAGTCACTTGTTCAATGAAGAGTACTAATGAAATCGTTAATGTATTATCTATTGCACTAATGATTGTTCTGTTTTTAGTTATTATGCCTAAAGAGTATCTTTTGTGTGTTTTAATATTGTCTTGTCGATAAATTATATGCACAAGCCGACAACGTTGGTTCACAAGAATGTGCACATTGAAGTAGTTTATGTTGACCTCTTGGCCTTTGGAAAAACATCGGATGAATAGTGCATGTGCACACACTTACCAAAATTCAAGCACCATCTAGAAAACGTGGCGATTAGGCCAATATACGTATCTTTTATTCAATTGGTTTCATTTATTTCACACTCTCTTTTCAGCTCCGAAAGCAAGGAGTAATGCATCGACACCAGTACGCACTATCAGATCAGCCCCTTCCTTTCTCTCACAACCAAAGCGAGAGTTGGGAAGGTTGTCAATGAACTCTCTGGATTTTTTATTTTTCTATCTTGTGTGCAAAGATATAGGGTATGACCTGCAACTGGATATTATAAGAAAATTTCATCCTTTAATAATCAAATTGTAAAAATATTAGTGTACTTTAGACATCAGTGACTCTATTTGTTATCATCTTGCACAATGAATGAGCTATCACAACTTAAAAGTTTCAGGTTTGATCTAATGGAGTGTCATTTATTAATATATTTTGGAATGTTCTTTTCCAAATGGATTAGTTCTAAATTATCCATAAAACAACTATCATTACTGCTAATGTGGTCACTCTTCTACGTGGATGTGCACCTCTTGTTTGTAAATTTGCATATCCATCTATGTATATATATCTATGTGTGGTATTAGACACGCAAGCACGGGCCATCCCTGCCTAGTACATATATACATGTATATATGTATGTATGTATGTATATACATATGTGTGTGTATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGGTATGTATGTATGTATATACATATGTAAATAGAGAGGGAACGATGAGAGAGACAGAGAGAGAGAGGAACGATGAGAAAGAGAGAGGGAAGAAAGAGTTAGATAAATTTGGCTAGGGTTTTCTTTTGTTTAAGAGACCTCATGAGGTCTCTCATTTTGTAAGTCTTTAATTAAATTAAATTATTATTTTTAATTTAACAAGTACAGACCTCGTGAGGTCTCTAATTTTATGAGAATTAGATTAAAAATTTAAAAAATATTAATTCAAATAGCGACCCCATGAGGTCTCTTATTATAGACCTATTTTTGAGGTCTCCTTTTCTAGGTCTCTTTTTGGCCTTTTTTTTAGTAGTGATAGTATAAGTGTGTCTTTGAGATTTCGGGCATAGGTTGAGGGAGTACTTGTACATTATCCTTAAAAATAATAATTTTATGCTTTTGCTTTTTATTAAAAAAATAGAATTTCTTAACTTATTCACAACATCAAAAAGTTGCTTAAATAATAATTTTATGCTTCTACTTTTTATAAACAATAGAAATTTTTAACTTCACGACAACAGAAATAATTTTTCTGCTTCAATTTAAAAGTAGTTTTAAGGAGTTGTCAAATACTTAAATTTTTAAAGGTCTAATACATATGACCATTAACTTAGCATCAACTCACAACAATGACCTTTAATTATGGGTGTGCAATAATAGATACTTAAACTTATATAAAAGGGAAAAGGGTGAAAAATACCCTTGGACTATTAGAAAAGGTTTATAAATACCCCTTTTTCACCTATTGGGTTAATACCCCTTCATCCACCTTTTTGGTCCATAATTACCCTTAAAACTAACAACCTTTTATTATTTAATTATTATTATTATCAATTATTATGTGACATCTTCATATTTGATAAATTTAAATTTCAATCCACAAAAAATTTTCTACCCATTTGACCCATATTCACATTTTTTGACCCAAATCAAATTAAAAATTCATCAAAATTAAAAGATTTGAACATCTCTTCGCTACCATTCCAACAATAACTTATTCTCTTTCTCATCACCATATACAACCTCAATCAATGATAATTAGTGAATTTAATACCAATTAGAACTAAAAGCCTCTTCTTGATTGTGTTAGAATTTGGTCAATGCTACCATTAAAATACAATCAAATAGAGCTTTTTAGTGCAACTCCACTATGAAAAATTGAATCTTTGAATAGAGTGTGAACCAAAAGGAAGAAATAAGAAGACCCAATTCAGGTTTTCTCAATGTCACCATGAAAACACAATCAAGAACAATTCTTTTAGTGCAACTCAACCATGAAAATTGAATATTTTGAAAGGGTGTGAACCAAAATGGGAAGAAAGAAACAAAACCCAAGTTAAATTATATCAATTCCACTATTAAAGCACGATTAAGAAGAACTATCTAGTGCAACTTCCCCTTAAAAAAATAATTTTTTCACATGGTGTGAACCAAAAGGAAGAAACAAGAAAGATCAAATTCAAACTCAATCAAGAAGAGCTTTTTAGTTATATTTGATATAACCAAATTCAAATATCATTATGTTAATTTCAAATTCAAATACTAATTGATTCAATCATTAATTTTATTTTGAAATTGTTGAATAAGAAATGAGGAAAAAAGAAAAAAGGTTATTAGGTTCAATGGAAAGAGAAGAGTTAGATGAAATTTATTATTTTTGATAACTTTTTTAATTGGTTTTGGGTCAAAGAATGTGGATATGGGTTAAATGGGTAGAAAAAATTTGGTGGGTTGGAATTTAAATTTATTCAATAAAAAGATGTCACATAATAATTAATAATAATATTAATTAAAAAAATAAAAAAATGTTAGTTTAAGAGTAATTGTGGACCAAAAAGGTGGATGGAAGGGTATTTTTAACCCAATAGGTGAATGTGAGGGGTATTTTTAAACCTTTTCGAATAGTTCAATGGGTATTTTTGGTCCTTTTTCGTATATAAAATTGAATATTAGACACATATGTCCTATATAACACCCTACGTGGGGTCTTACGTGCGTTATGTTATGTAGGACATGTGTGTCTACTTGTTCAATTTTATATAAATTTTAGTATCCACTTGTGCACATTCAAAGTTAGAGGGCATAATTATATGTTGAGACCAAATCAATAGTCATGTTTATGTATTATGATTTTTTTTTAAGAAAGTGTTTATTTTTAAAAAGAAAAAGTTACTTCTGGCCTCCAACCATCCATGCCATACACGTTCTTAAGCCTATTACAAAAACATATTCAAGATAGAAGTGTCATCATTTACTACAAATATATCCAGATTCAATCTCTAGATATTAATGTGAAATAAATATTTATGATCATGTTTTCCATAAGATTTTCCAAATATTGCCGTGTGTTGTGCTATATTGTTCAAATATATCATCACATTTCAATGTGATTACGACGATCAGATACACAAGTGAGGTTCATGTGTTTGACTCACTCACTAATTTTTTTCGTAGACACTATATTTGAATTAAGAAAATATAAAAATTTATGTATATTAACTTGTGAACCCCCAAACAATTTGGTGTAGAATCCCAAACTCCTAATCTTAGCTTCGCCTCTGTGATCAAAGATAGTAGAATTTAAGTACTGAATTACTATAAATTTTTATGTAGCTTAACTGGATCGATAGGGTTCTAGTTAATCTTTTATTATCAAAGTTGAACGAGAAACTCCATCATGTAGATACAATGATACATCATATAAATATAATGTGTAAGGTTTTCATTACTATATGCAGAGCTCGACCCTTCACCTAATGAACAATATGAATTAGGATACATAAAAATCTCTGACAAATATAAAATAACATAACATTGAAAAGCTATTGAAAAAAAAATGCTCCAAAAGTTCGTTACTGCATCTGAAATGACACGAATATATGTCCACTAACACTAGTACGAATTGTCTCCTCTTCTAATCATTCTTCATGACTCTTTCTTTGAATTAAAGTTTTTGTATGGTAAATCTATGTCAAGTTGGAATTCGTGTAAAGAGACTATGGATGGTAATGGGGCGGGGGCGGGGGCGGGGGCGGGGTGGATGTGGAGCGAGGTGGGTTTTGTGGGACGGGGCAGGGCGGGTTTTAGACTTAACAGGTGTGGGGATGCGGGGCAAGGTTGAAATATTCTTTTCCTAAATTAGTGAGGGTGGTGTTATATTGTAGGTGTTTTGATGATCCTCACAAATACGGGGACCTGGTTCTTGGCAGAGTGCTCTCGTCCAGATATAAATGGGGTACAGTCATAAAAGCCGTCATGTCAGGTGGTAGGTGAAAAGTGCAGTATCCTACACCAATAAGAAGAGCGGACGAGATTGTATGTTTCAGTATCTCACAATTGCAGGGACCTGGTACCAGGTAGAGTTTCCTCCATCAGATACATAATTGGTTACAGCTGTAAAGCTGTCATGTCAGAGGTTGGTAAGGCGTCAGTGTACTACACCAATCAGAATGGAGGAGGGTGTTTGTCCAACGGATAATAACTCTTTATGTTTATTATATATTCATTCATCCAAAGAAGGAAGTCAGACAGTAAGCCTTTTCAAGAACTCATATAGAAGTTTGCAACGGACTGGTTCCCGCAAGCAAGGGACTCGGTACCCGCAAGACTGCGACGTGAAAAGGACGAAAAGACAACTGTCAGAAAAGTTGTCATCTCTGATGTGGTAGGTGCACAACTTTTCCAACAGCAGGCCCTCAGCCAATGGGATGACTTCAACGAATTTGTGAGAATTTATATTATCTCTTTCCAACAATCACAAATTTAAGACTTGGCAAATTAAATTTGGATTTTCTCTGAAAATTCACAAGCTTGAACAAAAGGTCATCTTCAAGGAAGAACATTGCTCAACTCAACAGAAGGATCTGATAGAGTAAAGAAGAATCTTTGTTGTATTTAGAGCTTTGTATTTATGTACTTACATTATAAATCTGTTACTAATCTATAAAGGATTCAGATATTTGTTTTGGGTTTGTAAAAGTCTAAATCAGTTAAGGTTAACTGATTTAGTGGGCAACATTGTTTTGTTGCTTAGTCAAATTCTAAGTCATCTAGAGTTAGGTGGTTTAGTGGGCGGTGTGGCATCCGCTTAGGCTCTTCAAGTAATAGGTAGATTACTTGATCGTGAGATTAATAACTTTTTCTCACATTGATTGTAATCGGGTTTCACTTTTGCTTGAGAAGATTAGTAAAGACGGTTGTAAATCCTGTGCAACAGGTCGTGGTTTTACTCCCTTGAGCAAGGAGGTTTCCACGTAAACTTCTTGTGTTGTGTTCTTCATATTGTTTAATCTTCTGCACTGTTTTTGCTGTGTCAAGGGACCTGGTCCATTGACTGGTTGTGGATGCACATATTTCAACAGGTGGGGTGGGTTGACAGACGATCAAGTCTTTTCTTTTTTATTCAATGCCCGAAGTTTGCATTTAAGTCTCAACTAAATTCAAATTTTCCCTTCTCAACCCCATTCTTATCCCTTAAAAAGACAAAATCATTATGGCTTATGGGTTAACTTACGAAAACACTCTTAAAAAATTGTTTGATAGATTTTATAATAATAATGCTAAATAAAGTGTATAATTAGTAATATTTGCGTTAATAATGCTTGTATTAATTATGCTTATATTAATTATACATAGATTATTTCTTATGTATTTTTTGATTTGGTGTATTAAAAATAGTATGCATTGAGTATTTATTTACAAAGTTATCTTCCACAATTATGATGGAAAATGTGTAAGAAAGATTTTGAGGGATAATTGAGTCTTTAATCATGCTAATGCATGCATTAAATCTTTTACATTACCAATCCGGCAATATCTAGAAATCCACGGCAGCAACAATACACACTTTAATACATGAGTGTGTAATGTAGGTAACATAAAATGTACTAAACAAGATATTATTGATACACAAAAAAAAGGGTGTATATGACCGGGTTGGTTCGAGTTTTTAATACCAAATTATTGTGTCGAATTTTAAATTTACAAACCATATCAATAAAATTTGGATTTTTGGATTTAATGATATTTTTCCGGTAAAGTATTCATACAAATATATAATATACTTGTACAGTTGTACTTCAAATATTTCTTTAGCCCTACCAAAATACAACTAGCTAAAGTGTTTCTTCAAAAAATAACACAAAATATGTATAACAACTCTCTATTTGAAAGAGCTAAAAATAGAAAGAATTAAATTCGACAATAGCAAATCTGAAAAAATTTGACAATATATGTTAAATATGAGTTTTGGGTCAACTTCAACTGACTATATTTATTAGTAAAAAATGAGTTAGGTGGGGTAAAAAGTATCAATAAGTTCTTGGAAACCTCTTTCCAACGCCACCAAGCTTGCTAATTTTCAAACTCATATGAGGGATATATGCTCGTTTGAAGTCAGATTGTCCAGATAAGGAAAGTCACCCGGATTTAAGAAAGCTATTTTGGTGTTTTCATTACCCAATTAAGTTAATTCATTTTTAGTAATTAATTAGGGGTGTAAACTGAATTGGTTCATCTTACAAATTTCAAATTAACTACAGAGCTTTGAGAGAGGAGAAAAGAGGAAAATAGCCAAGGTTCGTCATGTTCTTGAGATTTCTCTTGCGGGTTTCGTCAAGGGTTAATCCCTAAGAGGTATGTGAGTTCACATTGTATTGGGTTCGTCTTAGTAGGGAAAAGATTTTGCTGCATTGGGTTCGTTTTAGTAGGAAAAATATTTTGCCCCCGATTTCACCCACGCGCCAATTAACATTGATATGGGGACGAACTCATAATAACTCAAGTCTCCATAAACCATGTAACCAACATGGGTAGAAAGGGTCATACTTTTTAGATGAATCCATAATGCTTTTTAGCATAGACTAGTGAATCCACTTAGTTGAGACGTTCTATATCCCAGCAAGTTATAGGACAATTCTGACAGCATGTGCGAGATACTATATCATCACATAACACATAGTGATGTTTGTTGGTTATAAAATCTCCTAAACAAAGTTTATCTTTGTATTTTTATATACAACTGAGATAATTATTGTATTTCTCAATACTTTGAGATGTTATTTATTGTTTTAAATGTTTTATATAAACTGCGTCTTATTTGTTGTTTATTTCTGTACTGAGTTGAGTAAGATTGAGGTAAGTGTTTCTTTCATATTTTAGTTCAAGCTTATGTCATGTTTAATTTTCCCCTTGCATAATCGTATATTTAATAAACTGATCTCATTTAGCCTGCATCTTTTATGTTGCAAAGACATGTAAGCGGTATCAGCATCCAATGCTTCGTGATCCAGTTGAGTATTTTAGAGTCATTTGGAGAGCGTCATTGCTTTTCGGAGCATCCTTTTTCATTGTTTTTTTTTATTTCAGTTCTTAAGATGATCTGGGGTCTTTTTCTGACATCCCTCTAAAGTGTTAGAGGCTTCATAGACTGTTAGACATTAGTAGTTCATTACTCTTATTCATTTCGGTTGTTTTGATTATCAGACTTGAGTTGCCTATATGGCCAGTTGAATGTTTTTTCTTTATATGTTCTGAGTTTTATTTATGAACTTATCTCTTGAGTAGTCTTAAATGTTGAGTAAAGTGTTTCGCTAAGTAGTAAGTTAGGCCAAGGGTTTGCTTGGGGCCAACAATGGTTCTCGAGCATCAGTCCCACTCAAGGTATAGGCTCGGGGCGTGATAATATAATATGATTATTGATTAAGGATGGACATGAATATCAAAAAATTGAAATATCGAACCAAATCGAAGAATTTCGATATTTCAATTTTGCTGTTTTGGTTTTCGATTTGATAATTAGTATGAATTTTGTGTTTTATGGTATTTCCTTTTGACTTTTGATATGTAATATTTGTGTTATTTGGTATTTTGATTTATCAAATTGTAACGACCTGTTTAGTCGTTTTGAGCAGCAGATTTTATTTCTGGAAAACTGGCTGAGGCGACGGATCCCACGACGGACCGTCATGGGCACGACAGACCGTCGCAGGGTCTCGTTTTAAAACACTTAAAAATTCTAAAATTGGGTACTGAAATCGACTCTCTGAACTTCGCGACGAAGTGGCAGGACGGACCGTCACAGGCGTGACGGGCCGTCACAGACCCTTCAAAGAAATTGAGTCTCTGAACTCTGTGACGGAGTAGCAGGACAGACCGTCGCAGGCACGACGGCCTGTCACAGACTGCGTAATCCCAGTCTGAGTCGGATTTCCTTAATTGTTTTGAGGGACGTTTTTGACTATTCCTGCTTTAATTAAAAAGTTAGTGGGTTAATGTTAATAAGTCTAATTACTTGGGGGTTAAAAGAGGTAACCTTAAGTTAATTAGTGGGTTATTATTGCCATCTTTTATTCTTAATCATATGCTAATTAGGTTAAAATAAAGAGGGTTTAAATAAATAAAATAGAAAGAACAAAGAGAAAGAGAGAGAGAGAGTCGAACGAGGAAAAAGAAAAACAAAGCTTTGGGAAATTGCTTGCTTGATCACTAATCTTCGGTGGAGGTAGGTTATGGTTTTTACGATATTCGTAGTAAACTCTTAATAGAGAATGATATGTATTGATAGTATTATAAACCCTGCTATATGCTTAATTGTATGCTTGCATGAATGTGATTATATAATTGTGATTAAATAAGCATGATGAAGCTATTGAATCCCAAATCTTGATAAAAACTCTAATCTCTTGTTAATGATGATGCCTTGGTATAAAAGAAGGCTTGATGAACTAAAGTAATGAGAATGAATATGCCTTGGTATAAGAGGAGGCTTGATGAACGAACTTAATGAGATTAGTGGATCGGAGTGTCACGTTCCGACACATAGAATTAAGGGATCGGGTGTCACGAACCGACACGTAGTATTATGAGGACCGGGTGTCATGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACTGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGAGTGTCACGTTCCGACACATAGTAGTAGGGGATCGGAGTTTCACGTACCGACACAAGAGGATTAACGAATATGAGGGAGCGGAGTGTCACGTACCGACACAATAGAAATAAAGATAATGAATCTTGAAAAGATGTTAATATACTCAATCTAATGAATCTAA</genome_strand>
        <mrna_strand>TAGTCTTCGGTGGAGGTAGGTTATTGTTTCTCTTACGATATTCGTAGTAAACTCTTAATAGAGAATGATATGTATTGATAATATTGTAAACCCTGCTATGTGCTTAATTGTATGCTTGCATGAATGTAACTATATAATTGTTATTATATAAGCATGATGAAGTTATTGAATCCCAAATCTTG-TAAAAACCTAATCTCTTT-TTAATGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAATTGATAGAATGAGATTAGGGGATCGGGTGTCACGAACTGACACGTAGAATTAGGGGATCGGGTGTCACAAACCGACACGTAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAGGGATCAGGTGTCACGAACCAACACATAG-ATTA-GGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCAGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGAGTGTCACGTTCCGACACGTAGATTTAGGGGATCAGAGTATCACGTACCGACACAAGAAGATTAATGAATATGANGGAGCGGAATGTCACGTACCGACACAAGAGAAATAAAGACAATGAATCTTG-AAAGATGTT-ATATACTCAATCTAATGAACATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E357033" ref_strand="+" ref_description="SGN-E357033 [cTOS-22-C24]">
      <seq>actgaatagatatcatcgcccaactcaaaatagaaatcaatatatatcaagnattatcataaaatcaactatgatactcaacatgtagcaacaacaagcactatatcattaacaattaccgtcacgttcacacatgaggactcaagcctcaataccatactcatttgggaatcatgttcattagatttagtatattaacatctttcaagattcattatctttatttctcttgtgacggaacatgacattccgctccctcatattcattaatcctcttgtgtgaacacatgacactccgatcccctaaatctacatgacagtttcatgaacgctatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="25898" stop="96170"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95534" g_stop="95870" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="337" r_length="337" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E357033" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>337</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357033" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95534" e_stop="95870"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTGAGTAGATATCATCGGCCAACTCAAAATAGAAATCAATATATACCAAGTAATATCATAAAATCAACTATGATACTCAACATGTAGCAACAGCAAGTACTATATCATTAACAATTACCGTCAAGTTCACACATGAGGACTCAAGCCTCAATACCGTACTCATTTGGGAATTATGTTCATTAGATTAAGTATATTAACATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGTCGGTACGTGACACTCCGCTCCCTCATATTCATTAATCCTCTTGTGTCGGTACGTGACACTCCGATCCCCTAATTCTACGTGTC-GGTTCGTGACACCCGATCC</genome_strand>
        <mrna_strand>ACTGAATAGATATCATCGCCCAACTCAAAATAGAAATCAATATATATCAAGNATTATCATAAAATCAACTATGATACTCAACATGTAGCAACAACAAGCACTATATCATTAACAATTACCGTCACGTTCACACATGAGGACTCAAGCCTCAATACCATACTCATTTGGGAATCATGTTCATTAGATTTAGTATATTAACATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGACGGAACATGACATTCCGCTCCCTCATATTCATTAATCCTCTTGTGTGAACACATGACACTCCGATCCCCTAAATCTACATGACAGTTTCATGA-ACGCTATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E329287" ref_strand="+" ref_description="SGN-E329287 [cTOD-2-K13]">
      <seq>acctagcccatctggtactaaggcggtgacacctccaccaactgaggaagtggtaagagagggtgaggatggggagaatgaacaagtgcagaatgaggaattgccaccccaacctacccaagagatgatcaatcaggttcttgcttaccttagcgggttatctgatcaaggccaagcacctccagtgttttctgcactagcacctcaggctccggaggtacaacatgcgcctactgtgactccccgcatcgatacctcattggaaataggaacgtttccccgtctgactacagggcctataatgacaaatgatcagcatgaactttttagtaagttcttgaaattgaaacctcaagtctacaagggtgttgaatctgaggatgcctacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggtttggtgttgagtttgtgacttatcagtttcaagggaacgccaaaatgtggtggcggtcacatgttgagtgtcaaccaacagaggcaccacgtatgacttgggcatcattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="100575" stop="101726"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100874" g_stop="101426" g_length="553"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E329287" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E329287" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100874" e_stop="101426"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTAGCCCATCTGGTACTAGGGCGGTGACTCCTCTACCGACTGAGGAAATAGTAAGAGAAGGGGAGGATGGAGAGAATGAACAAGTGCAGAATGAGGAAATGCCACCCCAACCTACCCCAGAGATGATCAATCA-GATCTGGCTTATCTTAGCGGGTTATCTGATCAGGCCCAGACACCTCCAGTATTTTCTGCACCAGCACCTCAGGGTCTGGAGGTTCAACATGCGGCTACTATGGCTCCCCGCATGGATGCCTCATTGGAAATAGGCACGTTTCCTCGTCTGACTACAGGGCCTATAATGATAAATGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCTGAATCTGAGGATGCCTACGATTTTCTGGTTGACTATCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTAGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCATCATTCT</genome_strand>
        <mrna_strand>ACCTAGCCCATCTGGTACTAAGGCGGTGACACCTCCACCAACTGAGGAAGTGGTAAGAGAGGGTGAGGATGGGGAGAATGAACAAGTGCAGAATGAGGAATTGCCACCCCAACCTACCCAAGAGATGATCAATCAGGTTCTTGCTTACCTTAGCGGGTTATCTGATCAAGGCCAAGCACCTCCAGTGTTTTCTGCACTAGCACCTCAGGCTCCGGAGGTACAACATGCGCCTACTGTGACTCCCCGCATCGATACCTCATTGGAAATAGGAACGTTTCCCCGTCTGACTACAGGGCCTATAATGACAAATGATCAGCATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCAAGTCTACAAGGGTGTTGAATCTGAGGATGCCTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACGTATGACTTGGGCATCATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E352401" ref_strand="+" ref_description="SGN-E352401 [cTOS-9-N1]">
      <seq>aatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtgccatttccctcatttgcacttgttcagtttccccatcctccccttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="-" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="101893" stop="100631"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101593" g_stop="100931" g_length="663"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="664" r_length="664" r_score="0.900"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="-" ref_id="SGN-E352401" ref_strand="+">
        <total_alignment_score>0.900</total_alignment_score>
        <cumulative_length_of_scored_exons>663</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352401" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101593" e_stop="100931"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCCGCTCTTGTGGACTGAAACAAAGCTGAGTGGCATATCTGGAAAGTGCATGAAACTTAGCCTCATATGCAGTAACCGACATCCTACCTTGCTCTAGGCTCAAGAATTCATCTCTTTTCCTATCCCTCAAGGTCCGGGGAATATACTTCTCCATAAACAAGCTAGAGAATGATGCCCAAGTCATAGGTGGTGCCTCTGTTGGTTGACACTCAACATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAAGTCACAAACTCAACACCTAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCATGATAGTCAACCAGAAAATCGTAGGCATCCTCAGATTCAGCACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTATCATTATAGGCCCTGTAGTCAGACGAGGAAACGTGCCTATTTCCAATGAGGCATCCATGCGGGGAGCCATAGTAGCCGCATGTTGAACCTCCAGACCCTGAGGTGCTGGTGCAGAAAATACTGGAGGTGTCTGGGCCTGATCAGATAACCCGCTAAGATAAGCCAG-ATCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTT-CCTCATTCTGCACTTGTTCATTCTCTCCATCCTCCCCTTCT</genome_strand>
        <mrna_strand>AATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGCCATTTCCCTCATT-TGCACTTGTTCAGTTTCCCCATCCTCCCCTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E356912" ref_strand="+" ref_description="SGN-E356912 [cTOS-22-F17]">
      <seq>caggatcaaacaatacggaagccatgcaatcacaaactagaagattacctgtgatgacagcatcagatgcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcgtttgtctgcccattgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccgttttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataacttggtccaggacaatttatcctaatatgtccaatctccccacatccataacattctctggagtcactcataggccccttggagaagtgttgaccggtctgaggtggacccccaactacagtctgtagtgaagactgaatgggtcgagccgagtaacctccggaaccttgtcctctagagtaagaacccttaaactcacctccctttcgaaacctctttgatgttgatgtcgtggtgaagtcgtctggcttcactccttccacttctatcacaaagtctaccacttcttggaaggattttgccgttgccgctacctgtaaggccgaaatccgcaattctgacctcaaccccttcacaaaccggagaatccgctcttgaggactgaaacagagttgagtggcatatccggatagtgcacggaacttagcctcataagcattaaccgacatcctaccttgctctaggctcaggaactcatctcttttcctatccctcaaagtccgggggatatactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="-" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="102533" stop="101144"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102233" g_stop="101444" g_length="790"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="790" r_length="790" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="-" ref_id="SGN-E356912" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>790</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E356912" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102233" e_stop="101444"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGGATCGAACAATACAGAAGTCATGCAATCACAAACAAAAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCAGTCCATTGCCCCTACCATGTTGTGATATAGTGGCTCCAGTTTGCCCATCACCCCAGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCCATTGGGGGTCTATAACTCTATTTTGGACAATTCCTCCTAATATGTCCAGTCTCCCCACATCTATAACACTCTCTGGAGTCAGGCATAGGTCTCTTAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTATAGTCTGTAGTGAAGACTGAATTGGTCGAACTGAGTAACCTCCTGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACCTCCCTTTCAAAACCCTTTTGATGTAGTTGCCATGGTGAAGTCATCTGGCTTTACTCCCTCTACCTCTATCACGAAGTCTACCACTTCTTGGAAAGATTTCGCTATAGCGGCTACCTGCAAGGCTGAAATCTGCAACTCTAACCTCAACCCCTTCACAAAACAGCGAATCCGCTCTTGTGGACTGAAACAAAGCTGAGTGGCATATCTGGAAAGTGCATGAAACTTAGCCTCATATGCAGTAACCGACATCCTACCTTGCTCTAGGCTCAAGAATTCATCTCTTTTCCTATCCCTCAAGGTCCGGGGAATATACTT</genome_strand>
        <mrna_strand>CAGGATCAAACAATACGGAAGCCATGCAATCACAAACTAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGCCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTGGTCCAGGACAATTTATCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCACTCATAGGCCCCTTGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAGCCGAGTAACCTCCGGAACCTTGTCCTCTAGAGTAAGAACCCTTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTTGATGTCGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTACCTGTAAGGCCGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGAGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCCGGATAGTGCACGGAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGCTCAGGAACTCATCTCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E353805" ref_strand="+" ref_description="SGN-E353805 [cTOS-10-C24]">
      <seq>ggatcaacaatacggaagccatgcaatcacaaactagaagattacctgtgatgacagcatcagatgcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcgtttgtctgcccattgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccgttttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataacttggtccaggacaatttatcctaatatgtccaatctccccacatccataacattctctggagtcactcataggccccttggagaagtgttgaccggtctgaggtggacccccaactacagtctgtagtgaagactgaatgggtcgagccgagtaacctccggaaccttgtcctctaaagtaagaacccttaaactcacctccctttcgaaacctctttgatgttgatgtcgtggtgaagtcgtctggcttcactccttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="-" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="102531" stop="101399"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102231" g_stop="101698" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="533" r_length="533" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="-" ref_id="SGN-E353805" ref_strand="+">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353805" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102231" e_stop="101698"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATCGAACAATACAGAAGTCATGCAATCACAAACAAAAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCAGTCCATTGCCCCTACCATGTTGTGATATAGTGGCTCCAGTTTGCCCATCACCCCAGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCCATTGGGGGTCTATAACTCTATTTTGGACAATTCCTCCTAATATGTCCAGTCTCCCCACATCTATAACACTCTCTGGAGTCAGGCATAGGTCTCTTAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTATAGTCTGTAGTGAAGACTGAATTGGTCGAACTGAGTAACCTCCTGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACCTCCCTTTCAAAACCCTTTTGATGTAGTTGCCATGGTGAAGTCATCTGGCTTTACTCCCTCT</genome_strand>
        <mrna_strand>GGATC-AACAATACGGAAGCCATGCAATCACAAACTAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGCCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTGGTCCAGGACAATTTATCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCACTCATAGGCCCCTTGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAGCCGAGTAACCTCCGGAACCTTGTCCTCTAAAGTAAGAACCCTTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTTGATGTCGTGGTGAAGTCGTCTGGCTTCACTCCTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E244046" ref_strand="+" ref_description="SGN-E244046 [cLEE-1-H7]">
      <seq>aaacacgaataggcatatcaagtaattcacaatgtaaagttagaccattagcaaatgaggaagatacataagaaaatgtggatccaggatcaaacaatacagaagccatgcaatcacaaaccaaaagattacctgtgatgacaacatcagattcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcattcttatgtctgttgcccctaccatgttgtgatgtagtggctccagtttgcccatcacctcggccgttttggtgaccaccatttcctcgaccgccacgtcctccagaataacggactctgccatgaccacctctacctctaacctttggaggtctgtaactctgttttggacaatatctcttaatatgtccaatctccccacacccatagcactctctgggttcatgcataagtctctcagagaagtgttgaccggtcgaaggtggacccccaactacagtctgtagtgaagactgaattggtcggactgagtaacttcccgaaccctgtcctctagtgtaagcaccattaaactcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="-" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="102617" stop="101459"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102317" g_stop="101759" g_length="559"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="559" r_length="559" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="-" ref_id="SGN-E244046" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102317" e_stop="101759"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACACGAATAGGCATGTCAAGTAATTCACAATGTAAATTAAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCGGGATCGAACAATACAGAAGTCATGCAATCACAAACAAAAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCAGTCCATTGCCCCTACCATGTTGTGATATAGTGGCTCCAGTTTGCCCATCACCCCAGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCCATTGGGGGTCTATAACTCTATTTTGGACAATTCCTCCTAATATGTCCAGTCTCCCCACATCTATAACACTCTCTGGAGTCAGGCATAGGTCTCTTAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTATAGTCTGTAGTGAAGACTGAATTGGTCGAACTGAGTAACCTCCTGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACC</genome_strand>
        <mrna_strand>AAACACGAATAGGCATATCAAGTAATTCACAATGTAAAGTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTGATGACAACATCAGATTCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCATTCTTATGTCTGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGGCCGTTTTGGTGACCACCATTTCCTCGACCGCCACGTCCTCCAGAATAACGGACTCTGCCATGACCACCTCTACCTCTAACCTTTGGAGGTCTGTAACTCTGTTTTGGACAATATCTCTTAATATGTCCAATCTCCCCACACCCATAGCACTCTCTGGGTTCATGCATAAGTCTCTCAGAGAAGTGTTGACCGGTCGAAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGCACCATTAAACTCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355244" ref_strand="+" ref_description="SGN-E355244 [cTOS-18-K20]">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttagcaaatgaggaagatacantagaaaacgtggatcccaggatcaacaatacagaagccatgcaatcacaatcgaaagattacctgtgatgacagcatctaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="-" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="103227" stop="101866"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102927" g_stop="102166" g_length="762"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="761" r_length="761" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="-" ref_id="SGN-E355244" ref_strand="+">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355244" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102927" e_stop="102166"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTTCCATCCTTCTTCTTCACAAACAAAACTGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAGCAACTCTTGAAGTTGGGCCTTTAACTATCTTAACTCCGCGGGAGCCATTCTATAAGGGGATATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACCGAAGTCAATATCCCTATCCGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACGGACTACCGAAACCGACTCAATCGAAGGAACTTGGGTAGTATCATCCCGGAGGTGCGCCAAGAAAGTTAGACAACCCTTACTAACCATCTTCTTAGCACGAAAAAAGGAGACGATACGAACCAGATTGGAAGTGTAGTCGCCCTCCCATACTAACGGATCTATCACAGGCTTGGCTAACGTCACTTTTTTAGCATTACAATCCAAAATCGCAAAATTCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAATTCAACCATTTCTAAGATAACCAAATCTACATGAGTGTTACTCCCTATAAAAGTCACCAAACAAGACCTATACACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGTAATTCACAATGTAAATTAAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGAT-CCGGGATCGAACAATACAGAAGTCATGCAATCACAAACAAAAAGATTACCTGTGATGACAGCATCAGAT</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAGCAAATGAGGAAGATACANTAGAAAACGTGGATCCCAGGATC-AACAATACAGAAGCCATGCAATCACAATC-GAAAGATTACCTGTGATGACAGCATCTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E352716" ref_strand="+" ref_description="SGN-E352716 [cTOS-11-H19]">
      <seq>gatctgtcccaggcttggctaacgtcacagttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaagtctacataagtattgctccccacaaaagtcaccagaccagacctatatactttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagcaattcataatttaatttaagaccagtagcaaatgaggaagatacatatgaaaatgtggatccagggtcaaataatacaaaagccatgcaatcacaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="-" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="102824" stop="101893"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102524" g_stop="102194" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="-" ref_id="SGN-E352716" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352716" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102524" e_stop="102194"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTATCACAGGCTTGGCTAACGTCACTTTTTTAGCATTACAATCCAAAATCGCAAAATTCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAATTCAACCATTTCTAAGATAACCAAATCTACATGAGTGTTACTCCCTATAAAAGTCACCAAACAAGACCTATACACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGTAATTCACAATGTAAATTAAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCGGGATCGAACAATACAGAAGTCATGCAATCACAAACAAA</genome_strand>
        <mrna_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCATAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCACAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E351414" ref_strand="+" ref_description="SGN-E351414 [cTOS-12-D7]">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="-" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="103227" stop="101967"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102927" g_stop="102267" g_length="661"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="661" r_length="661" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="-" ref_id="SGN-E351414" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E351414" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102927" e_stop="102267"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTTCCATCCTTCTTCTTCACAAACAAAACTGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAGCAACTCTTGAAGTTGGGCCTTTAACTATCTTAACTCCGCGGGAGCCATTCTATAAGGGGATATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACCGAAGTCAATATCCCTATCCGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACGGACTACCGAAACCGACTCAATCGAAGGAACTTGGGTAGTATCATCCCGGAGGTGCGCCAAGAAAGTTAGACAACCCTTACTAACCATCTTCTTAGCACGAAAAAAGGAGACGATACGAACCAGATTGGAAGTGTAGTCGCCCTCCCATACTAACGGATCTATCACAGGCTTGGCTAACGTCACTTTTTTAGCATTACAATCCAAAATCGCAAAATTCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAATTCAACCATTTCTAAGATAACCAAATCTACATGAGTGTTACTCCCTATAAAAGTCACCAAACAAGACCTATACACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGTAATTCACAATGTAAATTAAGACCATTAG</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E368762" ref_strand="+" ref_description="SGN-E368762 [TUS-22-P2]">
      <seq>gtctcacccaattcttcactgtctcaatcttacaaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagagtatatcagtatatcatcaataaacatgatgacaaagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagagaagacacaagcaccttgtaactgatcgaacaagtcatcaatgcgaggaagtggatacttgttcttaatagttaccttgttcaactgccggtagtctatgcacatccgaaaactcccatccttcttcttcacaaaccaaaccggagcaccccaaggagatgcacttggtctaatgaagactttgctcaaaaactcttgaagttgggcctttaactctcttaactccgcgggagccattctataagggggtatagaaatggggcgagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="-" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="103746" stop="102467"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103446" g_stop="102766" g_length="681"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="679" r_length="679" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="-" ref_id="SGN-E368762" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E368762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103446" e_stop="102766"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTGCCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACCCCTTCCTTAGAAACTACATGCCCCAAGAAGGACACTACATCTAGCCAAAACTCACATTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATAAAATCTTCAAATGCTCCTCATGTTCCTTCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTTGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTTGTTCGAAAAGCAGTCTTTGGCATATCCGTTGCCTCGTATTTTCAATTGATGATAACCGAATCTCAAGTCAATCTTAGAGAAGACACAAGCCCCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTAATAGTTACCTTGTTCAACTGCCGATAGTCTATGCACATCCGAAAACTTCCATCCTTCTTCTTCACAAACAAAACTGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAGCAACTCTTGAAGTTGGGCCTTTAACTATCTTAACTCCGCGGGAGCCATTCTATAAGGGGATATAGAAATGGGGCGAGTA</genome_strand>
        <mrna_strand>GTCTCACCCAATTCTTCACTGTCTCAATCTTACAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTATCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGTATATCAGTATATCATCAATAAACATGATGACAAAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCC-CGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGTGGATACTTGTTCTTAATAGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTCACAAACCAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACTTTGCTCAAAAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E379315" ref_strand="+" ref_description="SGN-E379315 [TUS-1-J2]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttncactgccggtagcctatgcacatccgaaaactccaatccttcttctttacaaacaaaaccggagcaccccaaggagatgcagttggtctaatgaagcctttgctcacaactctttgaagtggtcttttaactctcttaactctgcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="-" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="103817" stop="102504"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103517" g_stop="102804" g_length="714"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="712" r_length="712" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="-" ref_id="SGN-E379315" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E379315" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103517" e_stop="102804"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGACGGTAATAGCTAGCTAAACCAACAAAGCTCCTTATTTCTGACACACTAGTAGGTCTTGCCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACCCCTTCCTTAGAAACTACATGCCCCAAGAAGGACACTACATCTAGCCAAAACTCACATTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATAAAATCTTCAAATGCTCCTCATGTTCCTTCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTTGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTTGTTCGAAAAGCAGTCTTTGGCATATCCGTTGCCTCGTATTTTCAATTGATGATAACCGAATCTCAAGTCAATCTTAGAGAAGACACAAGCCCCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTAATAGTTACCTTGTTCAACTGCCGATAGTCTATGCACATCCGAAAACTTCCATCCTTCTTCTTCACAAACAAAACTGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAGCAACTCTTGAAGTTGGGCCTTTAACTATCTTAACTCCGCGG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCC-CGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTNCACTGCCGGTAGCCTATGCACATCCGAAAACTCCAATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCAGTTGGTCTAATGAAGCCTTTGCTCA-CAACTCTTTGAAGTGGTCTTTTAACTCTCTTAACTCTGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E375319" ref_strand="+" ref_description="SGN-E375319 [TUS-15-F18]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttcaactgccggtagcctatgcacatccgaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="-" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="103817" stop="102621"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103517" g_stop="102921" g_length="597"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="-" ref_id="SGN-E375319" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375319" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103517" e_stop="102921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGACGGTAATAGCTAGCTAAACCAACAAAGCTCCTTATTTCTGACACACTAGTAGGTCTTGCCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACCCCTTCCTTAGAAACTACATGCCCCAAGAAGGACACTACATCTAGCCAAAACTCACATTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATAAAATCTTCAAATGCTCCTCATGTTCCTTCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTTGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTTGTTCGAAAAGCAGTCTTTGGCATATCCGTTGCCTCGTATTTTCAATTGATGATAACCGAATCTCAAGTCAATCTTAGAGAAGACACAAGCCCCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTAATAGTTACCTTGTTCAACTGCCGATAGTCTATGCACATCCGAAAAC</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCC-CGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGCCTATGCACATCCGAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E204434" ref_strand="+" ref_description="SGN-E204434 [cLEC-13-J16]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="-" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="103817" stop="102691"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103517" g_stop="102992" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="525" r_length="525" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="-" ref_id="SGN-E204434" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103517" e_stop="102992"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGACGGTAATAGCTAGCTAAACCAACAAAGCTCCTTATTTCTGACACACTAGTAGGTCTTGCCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACCCCTTCCTTAGAAACTACATGCCCCAAGAAGGACACTACATCTAGCCAAAACTCACATTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATAAAATCTTCAAATGCTCCTCATGTTCCTTCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTTGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTTGTTCGAAAAGCAGTCTTTGGCATATCCGTTGCCTCGTATTTTCAATTGATGATAACCGAATCTCAAGTCAATCTTAGAGAAGACACAAGCCCCTTGTAACTGATCGAACAAGTCATCAAT</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCC-CGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E240817" ref_strand="+" ref_description="SGN-E240817 [cLED-24-J5]">
      <seq>gtctcacccatttcttcactgtctcaatcttaccaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagaggatatcagtatatcatcaatgaacatgatgacgcagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="-" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="103746" stop="102788"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103446" g_stop="103091" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="355" r_length="355" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="-" ref_id="SGN-E240817" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>356</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E240817" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103446" e_stop="103091"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTGCCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACCCCTTCCTTAGAAACTACATGCCCCAAGAAGGACACTACATCTAGCCAAAACTCACATTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATAAAATCTTCAAATGCTCCTCATGTTCCTTCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTTGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTTGTTCGAAAAGCAGTCTTTGGC</genome_strand>
        <mrna_strand>GTCTCACCCATTTCTTCACTGTCTCAATCTTACCAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTATCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGGATATCAGTATATCATCAATGAACATGATGACGCAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E577888" ref_strand="+" ref_description="SGN-E577888 [LE08BA01]">
      <seq>ctacatctcctaccatacaatgcttcaaatggagccatatcaatgcttgattgatagctattattgtatgaaaactccgctaagggtaggaagctatcccaatgaccaccaaactctatcacacacgcacgaagcatattctccaacacttgaatcgttcgctcagactgaccatcgggagaactagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="-" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="105298" stop="104521"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104998" g_stop="104822" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="-" ref_id="SGN-E577888" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>177</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E577888" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104998" e_stop="104822"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACATCTCCTCCCATACAATGCTTCGAAAGGAGCCATATCAATACTTGAGTGATAGCTATTGTTGTAGGAGAACTCTGCTAAGGGTAAGAAGTTATCTCAATGACCACCAAATTCTATCACACATGCACGAAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</genome_strand>
        <mrna_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGATTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATTCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E298638" ref_strand="+" ref_description="SGN-E298638 [cLET-44-A20]">
      <seq>tcattacatcggatttcagggtgagctaacgcttctagcttggactggatcttcttcttcatgtcttgatgccttgaagttccggcatggactagctgtttatgtattttagcttcttagatactcttagatttagtaatttgaagtacatgttcttgtgatgatgactgccagattttggggataataatagttgttgagtttttagaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="106906" stop="107716"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107206" g_stop="107425" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="219" r_length="219" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E298638" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>220</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E298638" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107206" e_stop="107425"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTACTCCGGATATCAGGGTGAGCTAACGCTTCTAGCTTGGACTGGATCTTCTTCTTCATGTCTTGATGCCTTGAAGTTCCGGCATGGACTAGCTTTTTATGTATTTTAGCTTCTTAGATACTCTTAGATTTAGTAATTTGAAGTAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGAATAATAATAACTGTTTGAGTTTTTAGAAGTTATTGAA</genome_strand>
        <mrna_strand>TCATTACATCGGATTTCAGGGTGAGCTAACGCTTCTAGCTTGGACTGGATCTTCTTCTTCATGTCTTGATGCCTTGAAGTTCCGGCATGGACTAGCTGTTTATGTATTTTAGCTTCTTAGATACTCTTAGATTTAGTAATTTGAAGTACATGTTCTTGTGATGATGACTGCCAGATTTTGGGGATAATAATAGTTG-TTGAGTTTTTAGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E202664" ref_strand="+" ref_description="SGN-E202664 [cLEC-19-J5]">
      <seq>taccctaggcataaaagggtcactgtaacgattcaaaaaaaaagaatgatataaataagaataaataggtatttaagggcataattgtcctttcacgttttaaatgaataaataaataaataagtaaataaataaaatagatttgtatttatttattttaaatgttatttgactaattcttgaattagtctcctaatccaaatagtcctctctctctcacgcttcttaactccctctctcacgtcctccatcttcctcacattatttctgacaaaacatcaacagttttcatgcttgaagaactaacaaaaattttttaagcaaaagaaaaagtaatcaaaacgtcaaggctaagagaggtttgtcgagagaggtgtacgttgaagtgaattgggagtgctttggaggagttttccgggtaacaacattaaagtttgaacatcgattaaggtatgagttttcttctctctcggtccctttccca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0040F08-ee87Y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C06HBa0040F08.1" temp_strand="+" temp_description="C06HBa0040F08.1  AC219207.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0040F08 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="6702" stop="117681"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116905" g_stop="117393" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="484" r_length="484" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0040F08.1" gen_strand="+" ref_id="SGN-E202664" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0040F08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E202664" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116905" e_stop="117393"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCATATG-TCACACAATTAACTGTAACGATTCAAAAAAAAAGAAGAGAATTATATAAATAAGAATAAATAGGTATTTAAGGGCGTAATTGTCCTTTCACGTTTTAAATGAATAAATAAATAAATAAGTAAATAAATAAAACAGATTTGTATTTATTTATTTTAAATGTTATTTGACTAATTCTTGAATTAGTCTCCTAATCCAAATAGTCCTCTCTCTCTCACGCTTCTTAACTCCCTCTCTCACGTTCTCCATCTTCCTCACATTATTTCTGCCAAAGCATCAACAGTTTTCATGCTTGAAGAACTAACAAAAAAAATTTTAAGCAAAAGAAAAAGTAATCAAAACGTCAAGGCTAAGAGAGTTTTGTCGAGAGAGGTGTACGTTGAAGTGAATTGGGAGTGATTTGGAGGAGTTTTCCGGGCAGCAACATTAAAGTTTGAACATCGATTAAGGTATGAGTTTTCTTCTCTCTTGAATCCTTTCCCA</genome_strand>
        <mrna_strand>TACCCTAGGCATAAAAGGGTCACTGTAACGATTCAAAAAAAAAGAA-TGA----TATAAATAAGAATAAATAGGTATTTAAGGGCATAATTGTCCTTTCACGTTTTAAATGAATAAATAAATAAATAAGTAAATAAATAAAATAGATTTGTATTTATTTATTTTAAATGTTATTTGACTAATTCTTGAATTAGTCTCCTAATCCAAATAGTCCTCTCTCTCTCACGCTTCTTAACTCCCTCTCTCACGTCCTCCATCTTCCTCACATTATTTCTGACAAAACATCAACAGTTTTCATGCTTGAAGAACTAAC-AAAAATTTTTTAAGCAAAAGAAAAAGTAATCAAAACGTCAAGGCTAAGAGAGGTTTGTCGAGAGAGGTGTACGTTGAAGTGAATTGGGAGTGCTTTGGAGGAGTTTTCCGGGTAACAACATTAAAGTTTGAACATCGATTAAGGTATGAGTTTTCTTCTCTCTCGGTCCCTTTCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>59</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="26198" PGL_stop="26606"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="26198" e_stop="26480"/>
            <exon e_start="26553" e_stop="26606"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.858" acc_prob="0.000" e_score="0.940"/>
          <exon-only e_score="0.759"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.940">
            <gDNA_exon_boundary e_start="26198" e_stop="26480" e_length="283"/>
          </exon>
          <intron i_serial="1" don_prob="0.858" acc_prob="0.000">
            <gDNA_intron_boundary i_start="26481" i_stop="26552" i_length="72"/>
          </intron>
          <exon e_serial="2" e_score="0.759">
            <gDNA_exon_boundary e_start="26553" e_stop="26606" e_length="54"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26198" stop="26480"/>
              <exon start="26553" stop="26606"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357033" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACTGAGTAGATATCATCGGCCAACTCAAAATAGAAAACAATATATACCAAGTAATATCATAAACTCAACTATGATACTCAACATGTAGCAACAACAAGCACTATATCATTAACAATTTCCGTCAAGTTCACACATGAGGACTCAAGCCTCAACACCATACTCATTTGGGAATCATGTTCATTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGTCGGTACGTGACACTCCGCTCCCTCATATTCATTAATCCTCTTGTGTCG : GAACGTGACACTCCGATCCCCTAAATCTACGTGTCGGTTCGTGAAACCCGATCC</gDNA_template>
            <first_frame> T  E  *  I  S  S  A  N  S  K  *  K  T  I  Y  T  K  *  Y  H  K  L  N  Y  D  T  Q  H  V  A  T  T  S  T  I  S  L  T  I  S  V  K  F  T  H  E  D  S  S  L  N  T  I  L  I  W  E  S  C  S  L  D  *  V  Y  *  H  L  S  R  F  I  I  F  I  S  L  V  S  V  R  D  T  P  L  P  H  I  H  *  S  S  C  V   : G  T  *  H  S  D  P  L  N  L  R  V  G  S  *  N  P  I  </first_frame>
            <second_frame>  L  S  R  Y  H  R  P  T  Q  N  R  K  Q  Y  I  P  S  N  I  I  N  S  T  M  I  L  N  M  *  Q  Q  Q  A  L  Y  H  *  Q  F  P  S  S  S  H  M  R  T  Q  A  S  T  P  Y  S  F  G  N  H  V  H  *  I  E  Y  I  N  I  F  Q  D  S  L  S  L  F  L  L  C  R  Y  V  T  L  R  S  L  I  F  I  N  P  L  V  S  :  E  R  D  T  P  I  P  *  I  Y  V  S  V  R  E  T  R  S </second_frame>
            <third_frame>   *  V  D  I  I  G  Q  L  K  I  E  N  N  I  Y  Q  V  I  S  *  T  Q  L  *  Y  S  T  C  S  N  N  K  H  Y  I  I  N  N  F  R  Q  V  H  T  *  G  L  K  P  Q  H  H  T  H  L  G  I  M  F  I  R  L  S  I  L  T  S  F  K  I  H  Y  L  Y  F  S  C  V  G  T  *  H  S  A  P  S  Y  S  L  I  L  L  C  R :   N  V  T  L  R  S  P  K  S  T  C  R  F  V  K  P  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0040F08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="26524" PGL_stop="26287"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="26524" e_stop="26287"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.945"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.945">
            <gDNA_exon_boundary e_start="26524" e_stop="26287" e_length="238"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26524" stop="26287"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391780" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCACGTACCGACACATAGTAGTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTGTTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGAAATTGTTAATGATATAGTGCTTGTTGTT</gDNA_template>
            <first_frame> S  R  T  D  T  *  *  *  G  I  G  V  S  R  T  D  T  R  G  L  M  N  M  R  E  R  S  V  T  Y  R  H  K  R  N  K  D  N  E  S  *  K  M  L  I  Y  S  I  *  *  T  *  F  P  N  E  Y  G  V  E  A  *  V  L  M  C  E  L  D  G  N  C  *  *  Y  S  A  C  C  </first_frame>
            <second_frame>  H  V  P  T  H  S  S  R  G  S  E  C  H  V  P  T  Q  E  D  *  *  I  *  G  S  G  V  S  R  T  D  T  R  E  I  K  I  M  N  L  E  R  C  *  Y  T  Q  S  N  E  H  D  S  Q  M  S  M  V  L  R  L  E  S  S  C  V  N  L  T  E  I  V  N  D  I  V  L  V  V </second_frame>
            <third_frame>   T  Y  R  H  I  V  V  G  D  R  S  V  T  Y  R  H  K  R  I  N  E  Y  E  G  A  E  C  H  V  P  T  Q  E  K  *  R  *  *  I  L  K  D  V  N  I  L  N  L  M  N  M  I  P  K  *  V  W  C  *  G  L  S  P  H  V  *  T  *  R  K  L  L  M  I  *  C  L  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0040F08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="27087" PGL_stop="26687"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="27087" e_stop="26687"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.913"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.913">
            <gDNA_exon_boundary e_start="27087" e_stop="26687" e_length="401"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27087" stop="26687"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357559" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATTCTTCGGTGGAGGTAGGTTATGGTTTTCATGCTTTCATAGTAAACTCTTAATATAGAATGATATGTATTGATAATATTGTAAACCCTGCTATGTGCTTAATTGTATGCATGCATGAACGTGATTATATAATTGTGATTATATTAAGCATGATGAAGTCATTGAATCCCAAATCTTGATAAAAACCTAATCTCTTTTTAATGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAAGGAGAAGGCTTGATGAGTTGATAGAATGAGATTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCATGAAGCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACG</gDNA_template>
            <first_frame> N  S  S  V  E  V  G  Y  G  F  H  A  F  I  V  N  S  *  Y  R  M  I  C  I  D  N  I  V  N  P  A  M  C  L  I  V  C  M  H  E  R  D  Y  I  I  V  I  I  L  S  M  M  K  S  L  N  P  K  S  *  *  K  P  N  L  F  L  M  M  M  P  W  *  G  R  R  L  D  E  L  K  *  *  D  *  *  C  L  G  K  G  E  G  L  M  S  *  *  N  E  I  R  G  S  G  V  T  N  R  H  V  D  L  G  D  R  V  S  *  S  D  T  *  I  *  G  I  G  C  H  E  P  T   </first_frame>
            <second_frame>  I  L  R  W  R  *  V  M  V  F  M  L  S  *  *  T  L  N  I  E  *  Y  V  L  I  I  L  *  T  L  L  C  A  *  L  Y  A  C  M  N  V  I  I  *  L  *  L  Y  *  A  *  *  S  H  *  I  P  N  L  D  K  N  L  I  S  F  *  *  *  C  L  G  K  G  E  G  L  M  N  *  S  N  E  I  D  D  A  L  V  K  E  K  A  *  *  V  D  R  M  R  L  G  D  R  V  S  R  T  D  T  *  I  *  G  I  G  C  H  E  A  T  R  R  F  R  G  S  G  V  T  N  R  H  </second_frame>
            <third_frame>   F  F  G  G  G  R  L  W  F  S  C  F  H  S  K  L  L  I  *  N  D  M  Y  *  *  Y  C  K  P  C  Y  V  L  N  C  M  H  A  *  T  *  L  Y  N  C  D  Y  I  K  H  D  E  V  I  E  S  Q  I  L  I  K  T  *  S  L  F  N  D  D  A  L  V  R  E  K  A  *  *  T  K  V  M  R  L  M  M  P  W  *  R  R  R  L  D  E  L  I  E  *  D  *  G  I  G  C  H  E  P  T  R  R  F  R  G  S  G  V  M  K  R  H  V  D  L  G  D  R  V  S  R  T  D  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0040F08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="30350" PGL_stop="32539"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30350" e_stop="32539"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.946"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.946">
            <gDNA_exon_boundary e_start="30350" e_stop="32539" e_length="2190"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30350" stop="31008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355232" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30419" stop="31180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355244" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30419" stop="31079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351414" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30646" stop="31188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355026" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31029" stop="31586"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31033" stop="31795"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31113" stop="31901"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356912" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31115" stop="31647"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353805" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31189" stop="31885"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356209" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31749" stop="32468"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31752" stop="32415"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352401" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32107" stop="32539"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352180" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAATGCGGGAAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTCACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGCCTTTGTTTAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATCGAAATGGGGCGAGTACCCGGTTCAAGGTCAATACAGAAATCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCACCAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATATGCACCGGATTGGAAGTGTACTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTTACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAGTTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAACATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCTCTATCGTTTGTCTGTCCATTGCCCCTACCATGTTGTGATGTAGTGGCTCCATTTGCCCATCACCTCGACCATTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTATTATGACCACCTCTACCTCTAGCCATTGGGGGTCTATAACTCTGTTTGGGACAATTCCTCCTAATATGTCCAGTCTCCCCACATCCATAACACTCTCTAGAGTCAAGCATAGGCCTCTCAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGCGAAGACTGAATTGGTCGAACTGAGTAACCTCCGGAACCCTGTCCTCTAGAGTAAGAACCATTAAACCCACCTCCCTTTCGAAGCCTCTTTGATGTCGATGCCATGGTGAATTCATCTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACCACTTCTTGGAAGGATTTTGCCGTAGCCGCTACCTGTAAGGCTGAAATCCGCAACTCTGACCTCAACCCCTTCACAAAACGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGGGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAATGTCCGAGGGATATACTTCTCCATAAACAAGCTAGAGAATGACGCCCAAGTCATAGGTGGTGCTTCTGTTGGTTGACACTCAACATGTGACCGCCACCATATTTTGGCATTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCATTCTACAATACCCATCTTGTGTAGTAGCTCATGACAGTCAACCAGAAAATCGTAAGCATCCTCAGATTCAGTACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAGATGTGGAAATGTGCCTATATCTAATGAGGCATCCATACGAGGAGCCATAGTGGCTGCATGTTGTACCTCTGAAACCGGAGGTGTTGGTGCAGAAAACACTGGAGGTGCCTGACCTTGATCAGACAACCCACTGAGATAGGCGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCAATCCCTCATTCTGCACTTGTTCATTTTCCCCATACTCCCCTTCTCTTATTACTTCCTCAGTCGGTGGAGGAGTCACTGCCGTAGTATCAGATGGGCTAGGTGCTCGTCCTCTTCCCCTAGAGGACGTCCACCCACGACCTCTACCACGGCCTCTTGCCGCTGCTCTTC</gDNA_template>
            <first_frame> S  M  R  E  R  G  Y  L  F  F  M  V  T  L  F  N  C  R  *  S  M  H  I  R  K  L  P  S  F  F  F  T  N  K  T  G  A  P  Q  G  D  A  L  G  L  I  K  P  L  F  N  N  S  *  S  W  A  F  N  S  L  N  S  A  G  A  I  L  *  G  G  I  E  M  G  R  V  P  G  S  R  S  I  Q  K  S  I  S  L  S  G  G  I  P  G  R  S  A  G  N  T  S  R  N  S  R  T  T  K  T  D  S  I  E  G  T  W  V  V  S  S  L  R  C  A  K  K  A  K  H  P  L  L  T  I  F  L  A  R  R  K  E  M  I  C  T  G  L  E  V  Y  S  P  S  H  T  N  G  S  V  P  G  L  A  N  V  T  V  L  A  L  Q  S  K  I  A  N  C  G  E  S  Q  V  I  P  R  I  T  S  K  S  S  I  S  K  I  T  K  S  T  *  V  L  L  P  T  K  F  T  K  Q  D  L  Y  T  F  S  T  T  T  D  S  P  T  G  V  E  T  R  I  G  I  S  S  N  S  Q  C  K  F  R  P  L  A  N  E  E  D  T  *  E  N  V  D  P  G  S  N  N  T  E  A  M  Q  S  Q  T  R  R  L  P  V  M  T  T  S  D  A  S  A  S  D  R  P  G  K  A  *  Q  W  A  L  S  F  V  C  P  L  P  L  P  C  C  D  V  V  A  P  F  A  H  H  L  D  H  F  G  D  H  H  Y  L  D  H  H  V  L  Q  N  N  G  L  Y  Y  D  H  L  Y  L  *  P  L  G  V  Y  N  S  V  W  D  N  S  S  *  Y  V  Q  S  P  H  I  H  N  T  L  *  S  Q  A  *  A  S  Q  R  S  V  D  R  S  E  V  D  P  Q  L  Q  S  V  A  K  T  E  L  V  E  L  S  N  L  R  N  P  V  L  *  S  K  N  H  *  T  H  L  P  F  E  A  S  L  M  S  M  P  W  *  I  H  L  A  S  L  L  P  P  L  P  R  N  L  P  L  L  G  R  I  L  P  *  P  L  P  V  R  L  K  S  A  T  L  T  S  T  P  S  Q  N  D  E  S  A  L  V  D  *  N  K  V  G  W  H  I  W  I  V  H  E  T  *  P  H  M  H  *  P  T  S  Y  L  A  L  G  S  R  T  H  P  F  S  Y  P  S  M  S  E  G  Y  T  S  P  *  T  S  *  R  M  T  P  K  S  *  V  V  L  L  L  V  D  T  Q  H  V  T  A  T  I  F  W  H  S  L  E  T  D  N  S  R  T  Q  H  Q  T  I  L  Q  Y  P  S  C  V  V  A  H  D  S  Q  P  E  N  R  K  H  P  Q  I  Q  Y  P  *  R  L  E  V  S  I  S  R  T  Y  *  K  V  H  A  D  H  L  S  L  *  A  Q  *  S  D  V  E  M  C  L  Y  L  M  R  H  P  Y  E  E  P  *  W  L  H  V  V  P  L  K  P  E  V  L  V  Q  K  T  L  E  V  P  D  L  D  Q  T  T  H  *  D  R  R  E  P  D  *  S  S  L  G  *  V  G  V  A  I  P  H  S  A  L  V  H  F  P  H  T  P  L  L  L  L  L  P  Q  S  V  E  E  S  L  P  *  Y  Q  M  G  *  V  L  V  L  F  P  *  R  T  S  T  H  D  L  Y  H  G  L  L  P  L  L  F </first_frame>
            <second_frame>  Q  C  G  K  E  D  T  C  S  L  W  L  P  C  S  T  A  G  S  L  C  T  S  E  N  S  H  P  S  S  S  Q  T  K  P  E  H  P  K  E  M  H  L  V  *  *  S  L  C  L  T  T  L  E  V  G  L  L  T  L  L  T  P  R  E  P  F  Y  K  G  V  S  K  W  G  E  Y  P  V  Q  G  Q  Y  R  N  Q  Y  P  Y  L  V  A  Y  Q  E  D  L  Q  G  T  H  P  E  T  H  G  P  P  K  P  T  Q  S  K  V  L  G  *  C  H  P  *  D  V  P  R  K  L  N  T  L  Y  *  P  F  S  *  H  E  E  R  R  *  Y  A  P  D  W  K  C  T  H  P  P  T  L  T  D  L  S  Q  A  W  L  T  L  P  F  *  H  Y  N  P  R  S  Q  I  A  E  K  A  K  S  Y  P  E  L  H  Q  N  H  P  F  L  R  *  P  N  L  H  K  C  C  S  P  Q  S  S  P  N  K  T  Y  I  P  F  Q  L  P  Q  T  H  P  P  E  *  K  H  E  *  A  Y  Q  V  I  H  N  V  S  L  D  H  *  Q  M  R  K  I  H  K  K  M  W  I  Q  D  Q  T  I  Q  K  P  C  N  H  K  P  E  D  Y  L  *  *  Q  H  Q  M  P  P  L  Q  T  A  Q  G  K  R  N  N  G  L  Y  R  L  S  V  H  C  P  Y  H  V  V  M  *  W  L  H  L  P  I  T  S  T  I  L  V  T  T  I  T  S  T  T  T  S  S  R  I  T  A  S  I  M  T  T  S  T  S  S  H  W  G  S  I  T  L  F  G  T  I  P  P  N  M  S  S  L  P  T  S  I  T  L  S  R  V  K  H  R  P  L  R  E  V  L  T  G  L  R  W  T  P  N  Y  S  L  *  R  R  L  N  W  S  N  *  V  T  S  G  T  L  S  S  R  V  R  T  I  K  P  T  S  L  S  K  P  L  *  C  R  C  H  G  E  F  I  W  L  H  S  F  H  L  Y  H  E  I  Y  H  F  L  E  G  F  C  R  S  R  Y  L  *  G  *  N  P  Q  L  *  P  Q  P  L  H  K  T  T  N  P  L  L  W  T  E  T  K  L  G  G  I  S  G  *  C  T  K  L  S  L  I  C  I  D  R  H  P  T  L  L  *  A  Q  E  L  I  P  F  P  I  P  Q  C  P  R  D  I  L  L  H  K  Q  A  R  E  *  R  P  S  H  R  W  C  F  C  W  L  T  L  N  M  *  P  P  P  Y  F  G  I  P  L  K  L  I  T  H  E  L  N  T  K  P  F  Y  N  T  H  L  V  *  *  L  M  T  V  N  Q  K  I  V  S  I  L  R  F  S  T  L  E  D  W  R  F  Q  F  Q  E  L  T  E  K  F  M  L  I  I  C  H  Y  R  P  S  S  Q  M  W  K  C  A  Y  I  *  *  G  I  H  T  R  S  H  S  G  C  M  L  Y  L  *  N  R  R  C  W  C  R  K  H  W  R  C  L  T  L  I  R  Q  P  T  E  I  G  E  N  L  I  D  H  L  W  G  R  L  G  W  Q  S  L  I  L  H  L  F  I  F  P  I  L  P  F  S  Y  Y  F  L  S  R  W  R  S  H  C  R  S  I  R  W  A  R  C  S  S  S  S  P  R  G  R  P  P  T  T  S  T  T  A  S  C  R  C  S   </second_frame>
            <third_frame>   N  A  G  K  R  I  L  V  L  Y  G  Y  L  V  Q  L  P  V  V  Y  A  H  P  K  T  P  I  L  L  L  H  K  Q  N  R  S  T  P  R  R  C  T  W  S  N  K  A  F  V  *  Q  L  L  K  L  G  F  *  L  S  *  L  R  G  S  H  S  I  R  G  Y  R  N  G  A  S  T  R  F  K  V  N  T  E  I  N  I  P  I  W  W  H  T  R  K  I  C  R  E  H  I  Q  K  L  T  D  H  Q  N  R  L  N  R  R  Y  L  G  S  V  I  L  E  M  C  Q  E  S  *  T  P  F  T  N  H  F  L  S  T  K  K  G  D  D  M  H  R  I  G  S  V  L  T  L  P  H  *  R  I  C  P  R  L  G  *  R  Y  R  F  S  I  T  I  Q  D  R  K  L  R  R  K  P  S  H  T  Q  N  Y  I  K  I  I  H  F  *  D  N  Q  I  Y  I  S  V  A  P  H  K  V  H  Q  T  R  P  I  Y  L  F  N  Y  H  R  L  T  H  R  S  R  N  T  N  R  H  I  K  *  F  T  M  *  V  *  T  I  S  K  *  G  R  Y  I  R  K  C  G  S  R  I  K  Q  Y  R  S  H  A  I  T  N  Q  K  I  T  C  D  D  N  I  R  C  L  R  F  R  P  P  R  E  S  V  T  M  G  S  I  V  C  L  S  I  A  P  T  M  L  *  C  S  G  S  I  C  P  S  P  R  P  F  W  *  P  P  L  P  R  P  P  R  P  P  E  *  R  P  L  L  *  P  P  L  P  L  A  I  G  G  L  *  L  C  L  G  Q  F  L  L  I  C  P  V  S  P  H  P  *  H  S  L  E  S  S  I  G  L  S  E  K  C  *  P  V  *  G  G  P  P  T  T  V  C  S  E  D  *  I  G  R  T  E  *  P  P  E  P  C  P  L  E  *  E  P  L  N  P  P  P  F  R  S  L  F  D  V  D  A  M  V  N  S  S  G  F  T  P  S  T  S  T  T  K  S  T  T  S  W  K  D  F  A  V  A  A  T  C  K  A  E  I  R  N  S  D  L  N  P  F  T  K  R  R  I  R  S  C  G  L  K  Q  S  W  V  A  Y  L  D  S  A  R  N  L  A  S  Y  A  L  T  D  I  L  P  C  S  R  L  K  N  S  S  L  F  L  S  L  N  V  R  G  I  Y  F  S  I  N  K  L  E  N  D  A  Q  V  I  G  G  A  S  V  G  *  H  S  T  C  D  R  H  H  I  L  A  F  P  *  N  *  *  L  T  N  S  T  P  N  H  S  T  I  P  I  L  C  S  S  S  *  Q  S  T  R  K  S  *  A  S  S  D  S  V  P  L  K  T  G  G  F  N  F  K  N  L  L  K  S  S  C  *  S  F  V  I  I  G  P  V  V  R  C  G  N  V  P  I  S  N  E  A  S  I  R  G  A  I  V  A  A  C  C  T  S  E  T  G  G  V  G  A  E  N  T  G  G  A  *  P  *  S  D  N  P  L  R  *  A  R  T  *  L  I  I  S  G  V  G  W  G  G  N  P  S  F  C  T  C  S  F  S  P  Y  S  P  S  L  I  T  S  S  V  G  G  G  V  T  A  V  V  S  D  G  L  G  A  R  P  L  P  L  E  D  V  H  P  R  P  L  P  R  P  L  A  A  A  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0040F08.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30557" stop="30952"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>393</number_coding_nucleotides>
                  <number_encoded_amino_acids>131</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GGIEMGRVPGSRSIQKSISLSGGIPGRSAGNTSRNSRTTKTDSIEGTWVVSSLRCAKKAKHPLLTIFLARRKEMICTGLEVYSPSHTNGSVPGLANVTVLALQSKIANCGESQVIPRITSKSSISKITKST*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0040F08.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31570" stop="31959"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>387</number_coding_nucleotides>
                  <number_encoded_amino_acids>129</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EPLNPPPFRSLFDVDAMVNSSGFTPSTSTTKSTTSWKDFAVAATCKAEIRNSDLNPFTKRRIRSCGLKQSWVAYLDSARNLASYALTDILPCSRLKNSSLFLSLNVRGIYFSINKLENDAQVIGGASVG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0040F08.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32262" stop="32537"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NRRCWCRKHWRCLTLIRQPTEIGENLIDHLWGRLGWQSLILHLFIFPILPFSYYFLSRWRSHCRSIRWARCSSSSPRGRPPTTSTTASCRCS</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0040F08.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31266" stop="31514"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WLHLPITSTILVTTITSTTTSSRITASIMTTSTSSHWGSITLFGTIPPNMSSLPTSITLSRVKHRPLREVLTGLRWTPNYSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="31845" PGL_stop="30402"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="31845" e_stop="31673"/>
            <exon e_start="30929" e_stop="30402"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.965"/>
          <exon-only e_score="0.907"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.965">
            <gDNA_exon_boundary e_start="31845" e_stop="31673" e_length="173"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="31672" i_stop="30930" i_length="743"/>
          </intron>
          <exon e_serial="2" e_score="0.907">
            <gDNA_exon_boundary e_start="30929" e_stop="30402" e_length="528"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31845" stop="31673"/>
              <exon start="30929" stop="30402"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353359" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACCCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCGTTTTGTGAAGGGGTTGAGGTCAGAGTTGCGGATTTCAGCCTTACAGGTAGCGGCTACGGCAAAATCCTTCCAAG : AAATGGATGATTTTGATGTAATTCTGGGTATGACTTGGCTTTCTCCGCAATTTGCGATCTTGGATTGTAATGCTAAAACGGTAACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGAGTACACTTCCAATCCGGTGCATATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTTGGTGGTCCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGATTTCTGTATTGACCTTGAACCGGGTACTCGCCCCATTTCGATACCCCCTTATAGAATGGCTCCCGCGGAGTTAAGAGAGTTAAAAGCCCAACTTCAAGAGTTGTTAAACAAAGGCTTTATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTGTTTGTGAAGAAGAAGGATGGGAGTTTTCGGATGTGCATAGACTACC</gDNA_template>
            <first_frame> A  R  *  D  V  G  Q  C  I  *  G  *  V  S  C  T  I  Q  I  C  H  P  T  L  F  Q  S  T  R  A  D  S  S  F  C  E  G  V  E  V  R  V  A  D  F  S  L  T  G  S  G  Y  G  K  I  L  P  R :   N  G  *  F  *  C  N  S  G  Y  D  L  A  F  S  A  I  C  D  L  G  L  *  C  *  N  G  N  V  S  Q  A  W  D  R  S  V  S  V  G  G  *  V  H  F  Q  S  G  A  Y  H  L  L  S  S  C  *  E  N  G  *  *  R  V  F  S  F  L  G  T  S  Q  G  *  H  Y  P  S  T  F  D  *  V  G  F  G  G  P  *  V  S  G  C  V  P  C  R  S  S  W  Y  A  T  R  *  G  Y  *  F  L  Y  *  P  *  T  G  Y  S  P  H  F  D  T  P  L  *  N  G  S  R  G  V  K  R  V  K  S  P  T  S  R  V  V  K  Q  R  L  Y  *  T  K  C  I  S  L  G  C  S  G  F  V  C  E  E  E  G  W  E  F  S  D  V  H  R  L   </first_frame>
            <second_frame>  Q  G  R  M  S  V  N  A  Y  E  A  K  F  R  A  L  S  R  Y  A  T  Q  L  C  F  S  P  Q  E  R  I  R  R  F  V  K  G  L  R  S  E  L  R  I  S  A  L  Q  V  A  A  T  A  K  S  F  Q   : E  M  D  D  F  D  V  I  L  G  M  T  W  L  S  P  Q  F  A  I  L  D  C  N  A  K  T  V  T  L  A  K  P  G  T  D  P  L  V  W  E  G  E  Y  T  S  N  P  V  H  I  I  S  F  L  R  A  K  K  M  V  S  K  G  C  L  A  F  L  A  H  L  K  D  D  T  T  Q  V  P  S  I  E  S  V  L  V  V  R  E  F  L  D  V  F  P  A  D  L  P  G  M  P  P  D  R  D  I  D  F  C  I  D  L  E  P  G  T  R  P  I  S  I  P  P  Y  R  M  A  P  A  E  L  R  E  L  K  A  Q  L  Q  E  L  L  N  K  G  F  I  R  P  S  A  S  P  W  G  A  P  V  L  F  V  K  K  K  D  G  S  F  R  M  C  I  D  Y  </second_frame>
            <third_frame>   K  V  G  C  R  S  M  H  M  R  L  S  F  V  H  Y  P  D  M  P  P  N  F  V  S  V  H  K  S  G  F  V  V  L  *  R  G  *  G  Q  S  C  G  F  Q  P  Y  R  *  R  L  R  Q  N  P  S  K  :  K  W  M  I  L  M  *  F  W  V  *  L  G  F  L  R  N  L  R  S  W  I  V  M  L  K  R  *  R  *  P  S  L  G  Q  I  R  *  C  G  R  V  S  T  L  P  I  R  C  I  S  S  P  F  F  V  L  R  K  W  L  V  K  G  V  *  L  S  W  H  I  S  R  M  T  L  P  K  Y  L  R  L  S  R  F  W  W  S  V  S  F  W  M  C  S  L  Q  I  F  L  V  C  H  Q  I  G  I  L  I  S  V  L  T  L  N  R  V  L  A  P  F  R  Y  P  L  I  E  W  L  P  R  S  *  E  S  *  K  P  N  F  K  S  C  *  T  K  A  L  L  D  Q  V  H  L  L  G  V  L  R  F  C  L  *  R  R  R  M  G  V  F  G  C  A  *  T  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0040F08.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31844" stop="31673"/>
                    <exon start="30929" stop="30403"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>699</number_coding_nucleotides>
                  <number_encoded_amino_acids>233</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QGRMSVNAYEAKFRALSRYATQLCFSPQERIRRFVKGLRSELRISALQVAATAKSFQEMDDFDVILGMTWLSPQFAILDCNAKTVTLAKPGTDPLVWEGEYTSNPVHIISFLRAKKMVSKGCLAFLAHLKDDTTQVPSIESVLVVREFLDVFPADLPGMPPDRDIDFCIDLEPGTRPISIPPYRMAPAELRELKAQLQELLNKGFIRPSASPWGAPVLFVKKKDGSFRMCIDY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="33644" PGL_stop="32546"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33644" e_stop="32546"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.971"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.971">
            <gDNA_exon_boundary e_start="33644" e_stop="32546" e_length="1099"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33644" stop="33167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246710" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33260" stop="32546"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392027" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACGTACCGACACATAGTAGTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTGTTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGAAATTGTTAATGATATAGTGCTTGTTGTTGCTACATGTTGAGTATCATAGTTGAGTTTATGATATTACTTGGTATATATTGTTTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTATTTTGTACTGACCCCTACTTTTATGTTTTCTTTTTGTTTATTTGTGGAGTGCAGCAAACGTGCCATCGTCTTCAACTCAACAGTAATTCAAGCCAGTCTTACTACATCGGAAATTCAGGGTGAGCTAATGCTTCTAGCTTGGACTGGATCTTCTTCTTCAAGTCTTGATGCCTTGAACTTCCGGCATGGACTAGTTTCTTATGTATTTTTAGCTTTTAGAATACTCTTAGTTTAGTCATTTGATCGTAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGGGAATAATAGATGTTGAATTTTAGAAGTTAATGAATTGGTCTTTATTTAATGAGTTTAAGTCTTCCGCATTACTTTCTGTTGATATTATATTGAAATGTTAAGGTTAGATTGGTTGGTTCGCTCACATAGGAGGGAAAGTGTGGGTGCCAGTCGCAACCCGGTTTGGGTCGTCACAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACGAGTCTAGTAGAGTCTTAAGGAACGGTAGAGGGACGCCTTTACTTTTCCTTGAGAGGCTATAAGCCTTTAGGAAAATTCCATTCTTTCTTTCTTCTTTCGTGCTATTACTTGGGTCCAATTGGTATCTAGGTGATACAAATTGGTATCTGACCATCTTTACTCTATTTCGCAGATGGTTAGAACTAGAGCAACGACTACGCCAGCATCAACACCAGCACCGGCGGGACAGGGTGCGACTGAGGCAGCCACTGGGGCTGTAG</gDNA_template>
            <first_frame> H  V  P  T  H  S  S  R  G  S  E  C  H  V  P  T  Q  E  D  *  *  I  *  G  S  G  V  S  R  T  D  T  R  E  I  K  I  M  N  L  E  R  C  *  Y  T  Q  S  N  E  H  D  S  Q  M  S  M  V  L  R  L  E  S  S  C  V  N  L  T  E  I  V  N  D  I  V  L  V  V  A  T  C  *  V  S  *  L  S  L  *  Y  Y  L  V  Y  I  V  F  Y  F  E  L  A  D  D  I  Y  S  V  P  V  F  C  T  D  P  Y  F  Y  V  F  F  L  F  I  C  G  V  Q  Q  T  C  H  R  L  Q  L  N  S  N  S  S  Q  S  Y  Y  I  G  N  S  G  *  A  N  A  S  S  L  D  W  I  F  F  F  K  S  *  C  L  E  L  P  A  W  T  S  F  L  C  I  F  S  F  *  N  T  L  S  L  V  I  *  S  *  M  F  L  *  *  *  L  P  D  F  G  G  I  I  D  V  E  F  *  K  L  M  N  W  S  L  F  N  E  F  K  S  S  A  L  L  S  V  D  I  I  L  K  C  *  G  *  I  G  W  F  A  H  I  G  G  K  V  W  V  P  V  A  T  R  F  G  S  S  Q  T  W  Y  Q  S  I  R  F  V  G  L  I  T  Q  E  R  V  *  *  S  L  K  E  R  *  R  D  A  F  T  F  P  *  E  A  I  S  L  *  E  N  S  I  L  S  F  F  F  R  A  I  T  W  V  Q  L  V  S  R  *  Y  K  L  V  S  D  H  L  Y  S  I  S  Q  M  V  R  T  R  A  T  T  T  P  A  S  T  P  A  P  A  G  Q  G  A  T  E  A  A  T  G  A  V  </first_frame>
            <second_frame>  T  Y  R  H  I  V  V  G  D  R  S  V  T  Y  R  H  K  R  I  N  E  Y  E  G  A  E  C  H  V  P  T  Q  E  K  *  R  *  *  I  L  K  D  V  N  I  L  N  L  M  N  M  I  P  K  *  V  W  C  *  G  L  S  P  H  V  *  T  *  R  K  L  L  M  I  *  C  L  L  L  L  H  V  E  Y  H  S  *  V  Y  D  I  T  W  Y  I  L  F  S  I  L  S  W  P  M  I  S  T  Q  Y  P  Y  F  V  L  T  P  T  F  M  F  S  F  C  L  F  V  E  C  S  K  R  A  I  V  F  N  S  T  V  I  Q  A  S  L  T  T  S  E  I  Q  G  E  L  M  L  L  A  W  T  G  S  S  S  S  S  L  D  A  L  N  F  R  H  G  L  V  S  Y  V  F  L  A  F  R  I  L  L  V  *  S  F  D  R  R  C  S  C  D  D  D  F  Q  I  L  G  E  *  *  M  L  N  F  R  S  *  *  I  G  L  Y  L  M  S  L  S  L  P  H  Y  F  L  L  I  L  Y  *  N  V  K  V  R  L  V  G  S  L  T  *  E  G  K  C  G  C  Q  S  Q  P  G  L  G  R  H  K  L  G  I  R  A  L  G  S  L  V  S  S  H  K  N  E  S  S  R  V  L  R  N  G  R  G  T  P  L  L  F  L  E  R  L  *  A  F  R  K  I  P  F  F  L  S  S  F  V  L  L  L  G  S  N  W  Y  L  G  D  T  N  W  Y  L  T  I  F  T  L  F  R  R  W  L  E  L  E  Q  R  L  R  Q  H  Q  H  Q  H  R  R  D  R  V  R  L  R  Q  P  L  G  L  * </second_frame>
            <third_frame>   R  T  D  T  *  *  *  G  I  G  V  S  R  T  D  T  R  G  L  M  N  M  R  E  R  S  V  T  Y  R  H  K  R  N  K  D  N  E  S  *  K  M  L  I  Y  S  I  *  *  T  *  F  P  N  E  Y  G  V  E  A  *  V  L  M  C  E  L  D  G  N  C  *  *  Y  S  A  C  C  C  Y  M  L  S  I  I  V  E  F  M  I  L  L  G  I  Y  C  F  L  F  *  V  G  R  *  Y  L  L  S  T  R  I  L  Y  *  P  L  L  L  C  F  L  F  V  Y  L  W  S  A  A  N  V  P  S  S  S  T  Q  Q  *  F  K  P  V  L  L  H  R  K  F  R  V  S  *  C  F  *  L  G  L  D  L  L  L  Q  V  L  M  P  *  T  S  G  M  D  *  F  L  M  Y  F  *  L  L  E  Y  S  *  F  S  H  L  I  V  D  V  L  V  M  M  T  S  R  F  W  G  N  N  R  C  *  I  L  E  V  N  E  L  V  F  I  *  *  V  *  V  F  R  I  T  F  C  *  Y  Y  I  E  M  L  R  L  D  W  L  V  R  S  H  R  R  E  S  V  G  A  S  R  N  P  V  W  V  V  T  N  L  V  S  E  H  *  V  R  W  S  H  H  T  R  T  S  L  V  E  S  *  G  T  V  E  G  R  L  Y  F  S  L  R  G  Y  K  P  L  G  K  F  H  S  F  F  L  L  S  C  Y  Y  L  G  P  I  G  I  *  V  I  Q  I  G  I  *  P  S  L  L  Y  F  A  D  G  *  N  *  S  N  D  Y  A  S  I  N  T  S  T  G  G  T  G  C  D  *  G  S  H  W  G  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0040F08.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33382" stop="33077"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>303</number_coding_nucleotides>
                  <number_encoded_amino_acids>101</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VYDITWYILFSILSWPMISTQYPYFVLTPTFMFSFCLFVECSKRAIVFNSTVIQASLTTSEIQGELMLLAWTGSSSSSLDALNFRHGLVSYVFLAFRILLV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0040F08.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32743" stop="32546"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AFRKIPFFLSSFVLLLGSNWYLGDTNWYLTIFTLFRRWLELEQRLRQHQHQHRRDRVRLRQPLGL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="57646" PGL_stop="59436"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57646" e_stop="58537"/>
            <exon e_start="58631" e_stop="59436"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="57646" e_stop="58537" e_length="892"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="1.000">
            <gDNA_intron_boundary i_start="58538" i_stop="58630" i_length="93"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="58631" e_stop="59436" e_length="806"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57646" stop="58018"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444688" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57647" stop="58246"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444447" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57651" stop="58289"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448747" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57656" stop="58108"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E463703" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57659" stop="58154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E437424" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57661" stop="58357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465835" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57661" stop="58337"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E462044" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57663" stop="58397"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544671" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57663" stop="57967"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562052" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57664" stop="58173"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305998" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57674" stop="58418"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455686" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57677" stop="58407"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465160" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57973" stop="58537"/>
              <exon start="58631" stop="58851"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589911" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58676" stop="59436"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544670" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58898" stop="59396"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266086" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACCTGGTGTATGATGTATTACTTAATAACTCCAATTCTTCTTTCTCTCGTTTTTGTAATCACTTTGAGATATTTCTATCGATCAAAAACAAAATTACCGCTTCCTCCAGGTCCATTTTCATGGCCCTTTATTGGAAATCTTTTCCATGTTGGTAGAAAACGTCCTCATGCTTCTCTAGCAAAGCTAGCTCAATCTCATGCTCCTGATTTAATGTCCTTAAGGTTCGGTACACGTCTCGTGGTCGTAGCCTCATCCCCTGCAGCTGCTGCTGCGGTTCTTAAAACACATGATCGTTTGCTTTCTGGTCGTTTCGTTTCTCATCCCATACGAGTTGAGGGATCGAAACTTCATAATGTGTCAACTGCTTTTTTAGAAGAGTGTGATGAGAATTGGAAAAACGTTCGAACTATATACAGGGGAGCCCTGTTTTCTAACAAAGCATTGGAATCACAAGTGAGTTTAAGGGAGAACAAAATCAGGGAAATGATGCAATATTTAGATACTAAAATGGGACAAGTGATTAAAATAAAGTTTGTGGTTTTTGTGACCGCGTTAAATGTGTTGGCTAATTTACTTCTTTCGGTAGATTTAATTGATTTTGAAGGAAAGGGAATTGGTGCAGGATTAACAGAGTACTTGCGTAAATTCACTGAGGCTGGTGGTATACTGGAGTTATCAGATTTGTATCCTGTTTTGGGTATTTTATGTACGGATTTGCAGGGGACGTATAAGAAACTTATCGGTATGTTTGATACTATTTGTGCTGTTTGGGGAGACATTGTTCAGGACAAAAGAAAAAGAGACAGTCAACCTTCATTGGATTCTGTAGATTTCGTAGATGCTTTGGTTAAAAATGGTTTCACTGATAAACATGTCAATGCATTGCTTTTG : GAAATATTTGCAGCTGGGACAGAATCTACGACTGCTACGAGTGAATGGATGCTAGTAGAACTCCTAAGAAAACCACAAGCCTTACAAAAACTCCGCGATGAAATATCACAAGTAGTAGGAGGAAGTAAGGGCATTATAAAGGAATCCGACTTGCCAAGCTTACCATACTTGGACGCTTGTTTTAAAGAGACACTAAGGTTGCATCCTCCTGGACCGTTGTTGCTCCCTCATCGTGCAGTGCAAACATGTGAAGTGATGGGGTACAGAATTCCCAGAAACACTCAAGTGTTGGTTAATATGTGGGCAATTGCAAGGGATTCTAAGATTTGGGACGATCCTTCGAGCTTTAAACCTGAAAGATTTATCAATTCAAAATTCGACAACAAAGGGCAAAAGTTTGAGTATATTCCTTTTGGTTCGGGGAGAAGAATATGTGCTGGAGAACCCTTGGCTTCGAGGTTTATTCCGTTAGCTGTTGCTTCATTGATCCATAAGTTCGATTGGATTCTGCCAAATGAAATAGATCCAGCTAAGATTAACATGGATGAGGTATTGGATGTCACCATGTTTAAGAAAGATTCACTTCTTGTTATTCCTAAATTGCGGAATGTGTGAGGGATCGATGATCACTATGTTGTAAAATATCCATTATCATTATGTTGATGTTCATGTTGTGTGTCTATGAATTATATATTGTGTCAAATTTAAGTCCTTAATTGTCTCTGAATAACTTCCAAGATATAAAACTTCTTGTGGTACAGTGAAGATGTTATTTCTCTTGTTTTAAAACTCTTTCCTACAACAAA</gDNA_template>
            <first_frame> N  L  V  Y  D  V  L  L  N  N  S  N  S  S  F  S  R  F  C  N  H  F  E  I  F  L  S  I  K  N  K  I  T  A  S  S  R  S  I  F  M  A  L  Y  W  K  S  F  P  C  W  *  K  T  S  S  C  F  S  S  K  A  S  S  I  S  C  S  *  F  N  V  L  K  V  R  Y  T  S  R  G  R  S  L  I  P  C  S  C  C  C  G  S  *  N  T  *  S  F  A  F  W  S  F  R  F  S  S  H  T  S  *  G  I  E  T  S  *  C  V  N  C  F  F  R  R  V  *  *  E  L  E  K  R  S  N  Y  I  Q  G  S  P  V  F  *  Q  S  I  G  I  T  S  E  F  K  G  E  Q  N  Q  G  N  D  A  I  F  R  Y  *  N  G  T  S  D  *  N  K  V  C  G  F  C  D  R  V  K  C  V  G  *  F  T  S  F  G  R  F  N  *  F  *  R  K  G  N  W  C  R  I  N  R  V  L  A  *  I  H  *  G  W  W  Y  T  G  V  I  R  F  V  S  C  F  G  Y  F  M  Y  G  F  A  G  D  V  *  E  T  Y  R  Y  V  *  Y  Y  L  C  C  L  G  R  H  C  S  G  Q  K  K  K  R  Q  S  T  F  I  G  F  C  R  F  R  R  C  F  G  *  K  W  F  H  *  *  T  C  Q  C  I  A  F   : G  N  I  C  S  W  D  R  I  Y  D  C  Y  E  *  M  D  A  S  R  T  P  K  K  T  T  S  L  T  K  T  P  R  *  N  I  T  S  S  R  R  K  *  G  H  Y  K  G  I  R  L  A  K  L  T  I  L  G  R  L  F  *  R  D  T  K  V  A  S  S  W  T  V  V  A  P  S  S  C  S  A  N  M  *  S  D  G  V  Q  N  S  Q  K  H  S  S  V  G  *  Y  V  G  N  C  K  G  F  *  D  L  G  R  S  F  E  L  *  T  *  K  I  Y  Q  F  K  I  R  Q  Q  R  A  K  V  *  V  Y  S  F  W  F  G  E  K  N  M  C  W  R  T  L  G  F  E  V  Y  S  V  S  C  C  F  I  D  P  *  V  R  L  D  S  A  K  *  N  R  S  S  *  D  *  H  G  *  G  I  G  C  H  H  V  *  E  R  F  T  S  C  Y  S  *  I  A  E  C  V  R  D  R  *  S  L  C  C  K  I  S  I  I  I  M  L  M  F  M  L  C  V  Y  E  L  Y  I  V  S  N  L  S  P  *  L  S  L  N  N  F  Q  D  I  K  L  L  V  V  Q  *  R  C  Y  F  S  C  F  K  T  L  S  Y  N  K </first_frame>
            <second_frame>  T  W  C  M  M  Y  Y  L  I  T  P  I  L  L  S  L  V  F  V  I  T  L  R  Y  F  Y  R  S  K  T  K  L  P  L  P  P  G  P  F  S  W  P  F  I  G  N  L  F  H  V  G  R  K  R  P  H  A  S  L  A  K  L  A  Q  S  H  A  P  D  L  M  S  L  R  F  G  T  R  L  V  V  V  A  S  S  P  A  A  A  A  A  V  L  K  T  H  D  R  L  L  S  G  R  F  V  S  H  P  I  R  V  E  G  S  K  L  H  N  V  S  T  A  F  L  E  E  C  D  E  N  W  K  N  V  R  T  I  Y  R  G  A  L  F  S  N  K  A  L  E  S  Q  V  S  L  R  E  N  K  I  R  E  M  M  Q  Y  L  D  T  K  M  G  Q  V  I  K  I  K  F  V  V  F  V  T  A  L  N  V  L  A  N  L  L  L  S  V  D  L  I  D  F  E  G  K  G  I  G  A  G  L  T  E  Y  L  R  K  F  T  E  A  G  G  I  L  E  L  S  D  L  Y  P  V  L  G  I  L  C  T  D  L  Q  G  T  Y  K  K  L  I  G  M  F  D  T  I  C  A  V  W  G  D  I  V  Q  D  K  R  K  R  D  S  Q  P  S  L  D  S  V  D  F  V  D  A  L  V  K  N  G  F  T  D  K  H  V  N  A  L  L  L  :  E  I  F  A  A  G  T  E  S  T  T  A  T  S  E  W  M  L  V  E  L  L  R  K  P  Q  A  L  Q  K  L  R  D  E  I  S  Q  V  V  G  G  S  K  G  I  I  K  E  S  D  L  P  S  L  P  Y  L  D  A  C  F  K  E  T  L  R  L  H  P  P  G  P  L  L  L  P  H  R  A  V  Q  T  C  E  V  M  G  Y  R  I  P  R  N  T  Q  V  L  V  N  M  W  A  I  A  R  D  S  K  I  W  D  D  P  S  S  F  K  P  E  R  F  I  N  S  K  F  D  N  K  G  Q  K  F  E  Y  I  P  F  G  S  G  R  R  I  C  A  G  E  P  L  A  S  R  F  I  P  L  A  V  A  S  L  I  H  K  F  D  W  I  L  P  N  E  I  D  P  A  K  I  N  M  D  E  V  L  D  V  T  M  F  K  K  D  S  L  L  V  I  P  K  L  R  N  V  *  G  I  D  D  H  Y  V  V  K  Y  P  L  S  L  C  *  C  S  C  C  V  S  M  N  Y  I  L  C  Q  I  *  V  L  N  C  L  *  I  T  S  K  I  *  N  F  L  W  Y  S  E  D  V  I  S  L  V  L  K  L  F  P  T  T   </second_frame>
            <third_frame>   P  G  V  *  C  I  T  *  *  L  Q  F  F  F  L  S  F  L  *  S  L  *  D  I  S  I  D  Q  K  Q  N  Y  R  F  L  Q  V  H  F  H  G  P  L  L  E  I  F  S  M  L  V  E  N  V  L  M  L  L  *  Q  S  *  L  N  L  M  L  L  I  *  C  P  *  G  S  V  H  V  S  W  S  *  P  H  P  L  Q  L  L  L  R  F  L  K  H  M  I  V  C  F  L  V  V  S  F  L  I  P  Y  E  L  R  D  R  N  F  I  M  C  Q  L  L  F  *  K  S  V  M  R  I  G  K  T  F  E  L  Y  T  G  E  P  C  F  L  T  K  H  W  N  H  K  *  V  *  G  R  T  K  S  G  K  *  C  N  I  *  I  L  K  W  D  K  *  L  K  *  S  L  W  F  L  *  P  R  *  M  C  W  L  I  Y  F  F  R  *  I  *  L  I  L  K  E  R  E  L  V  Q  D  *  Q  S  T  C  V  N  S  L  R  L  V  V  Y  W  S  Y  Q  I  C  I  L  F  W  V  F  Y  V  R  I  C  R  G  R  I  R  N  L  S  V  C  L  I  L  F  V  L  F  G  E  T  L  F  R  T  K  E  K  E  T  V  N  L  H  W  I  L  *  I  S  *  M  L  W  L  K  M  V  S  L  I  N  M  S  M  H  C  F  W :   K  Y  L  Q  L  G  Q  N  L  R  L  L  R  V  N  G  C  *  *  N  S  *  E  N  H  K  P  Y  K  N  S  A  M  K  Y  H  K  *  *  E  E  V  R  A  L  *  R  N  P  T  C  Q  A  Y  H  T  W  T  L  V  L  K  R  H  *  G  C  I  L  L  D  R  C  C  S  L  I  V  Q  C  K  H  V  K  *  W  G  T  E  F  P  E  T  L  K  C  W  L  I  C  G  Q  L  Q  G  I  L  R  F  G  T  I  L  R  A  L  N  L  K  D  L  S  I  Q  N  S  T  T  K  G  K  S  L  S  I  F  L  L  V  R  G  E  E  Y  V  L  E  N  P  W  L  R  G  L  F  R  *  L  L  L  H  *  S  I  S  S  I  G  F  C  Q  M  K  *  I  Q  L  R  L  T  W  M  R  Y  W  M  S  P  C  L  R  K  I  H  F  L  L  F  L  N  C  G  M  C  E  G  S  M  I  T  M  L  *  N  I  H  Y  H  Y  V  D  V  H  V  V  C  L  *  I  I  Y  C  V  K  F  K  S  L  I  V  S  E  *  L  P  R  Y  K  T  S  C  G  T  V  K  M  L  F  L  L  F  *  N  S  F  L  Q  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0040F08.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57647" stop="58537"/>
                    <exon start="58631" stop="59245"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1503</number_coding_nucleotides>
                  <number_encoded_amino_acids>501</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TWCMMYYLITPILLSLVFVITLRYFYRSKTKLPLPPGPFSWPFIGNLFHVGRKRPHASLAKLAQSHAPDLMSLRFGTRLVVVASSPAAAAAVLKTHDRLLSGRFVSHPIRVEGSKLHNVSTAFLEECDENWKNVRTIYRGALFSNKALESQVSLRENKIREMMQYLDTKMGQVIKIKFVVFVTALNVLANLLLSVDLIDFEGKGIGAGLTEYLRKFTEAGGILELSDLYPVLGILCTDLQGTYKKLIGMFDTICAVWGDIVQDKRKRDSQPSLDSVDFVDALVKNGFTDKHVNALLLEIFAAGTESTTATSEWMLVELLRKPQALQKLRDEISQVVGGSKGIIKESDLPSLPYLDACFKETLRLHPPGPLLLPHRAVQTCEVMGYRIPRNTQVLVNMWAIARDSKIWDDPSSFKPERFINSKFDNKGQKFEYIPFGSGRRICAGEPLASRFIPLAVASLIHKFDWILPNEIDPAKINMDEVLDVTMFKKDSLLVIPKLRNV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="70535" PGL_stop="70711"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70535" e_stop="70711"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.949"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.949">
            <gDNA_exon_boundary e_start="70535" e_stop="70711" e_length="177"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70535" stop="70711"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577888" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTACATATCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGAGTGATAGCTATTATTGTATGAAAACTCCGTTAAGGGTAAGAAGTTATCCCAATGGCCACCAAATTCTATCACACATGCACGAAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</gDNA_template>
            <first_frame> L  H  I  L  P  Y  N  A  S  N  G  A  I  S  M  L  E  *  *  L  L  L  Y  E  N  S  V  K  G  K  K  L  S  Q  W  P  P  N  S  I  T  H  A  R  S  I  S  S  N  T  *  I  V  R  S  D  *  P  S </first_frame>
            <second_frame>  Y  I  S  Y  H  T  M  L  Q  M  E  P  Y  Q  C  L  S  D  S  Y  Y  C  M  K  T  P  L  R  V  R  S  Y  P  N  G  H  Q  I  L  S  H  M  H  E  A  Y  P  P  T  L  E  S  F  A  Q  T  D  H   </second_frame>
            <third_frame>   T  Y  P  T  I  Q  C  F  K  W  S  H  I  N  A  *  V  I  A  I  I  V  *  K  L  R  *  G  *  E  V  I  P  M  A  T  K  F  Y  H  T  C  T  K  H  I  L  Q  H  L  N  R  S  L  R  L  T  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0040F08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="72019" PGL_stop="72769"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72019" e_stop="72769"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.937"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.937">
            <gDNA_exon_boundary e_start="72019" e_stop="72769" e_length="751"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72019" stop="72731"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72019" stop="72614"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72019" stop="72544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72090" stop="72769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72090" stop="72448"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240817" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAATCCCTTGAGAAATCGGCCGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGAATCCACCATCACTCCATCCTTAGAAACCACGTGTCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATTACAAAGAGATCCAGATATGGCTTAAAAATCCCGTTCATCAAGCTCATAAATGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAGTCGGATCTCAAGTCAATCTTAGAGAAAACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGTGGATACTTGTTCTTAATAGTTACCTTTTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTTCCATCCTTCTTCTTCACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTTATGAAGCCTTTGCTCAACAACTTTTGAAGTTGGGTCTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTG</gDNA_template>
            <first_frame> E  S  L  E  K  S  A  V  V  A  S  *  P  N  K  A  P  Y  F  *  H  I  S  R  S  Y  P  I  L  H  C  L  N  L  R  R  I  H  H  H  S  I  L  R  N  H  V  S  Q  E  G  H  C  I  *  P  K  L  T  L  R  E  L  G  I  K  L  F  L  P  Q  H  F  Q  Y  N  S  Q  M  L  L  M  F  L  L  T  F  R  V  Y  Q  Y  I  I  N  K  Y  D  Y  K  E  I  Q  I  W  L  K  N  P  V  H  Q  A  H  K  C  S  R  G  I  R  K  T  K  R  H  H  Y  K  F  V  M  P  I  P  G  S  K  S  S  L  W  H  I  R  C  P  Y  F  Q  L  M  I  V  G  S  Q  V  N  L  R  E  N  T  S  T  L  *  L  I  E  Q  V  I  N  A  R  K  W  I  L  V  L  N  S  Y  L  F  Q  L  P  V  V  Y  A  H  P  K  T  S  I  L  L  L  H  K  Q  N  R  S  T  P  R  R  C  T  W  S  Y  E  A  F  A  Q  Q  L  L  K  L  G  L  *  L  S  *  L  R  G  S  H  S  I  R  G  Y  R  N  G  A  S  </first_frame>
            <second_frame>  N  P  L  R  N  R  P  *  *  L  A  N  P  T  K  L  L  I  S  D  T  L  V  G  L  T  Q  F  F  T  V  S  I  L  E  E  S  T  I  T  P  S  L  E  T  T  C  P  K  K  D  T  A  S  S  Q  N  S  H  L  E  N  L  A  *  S  F  F  S  L  N  I  S  N  T  I  L  K  C  S  S  C  S  F  L  L  L  E  Y  I  S  I  S  S  I  N  T  I  T  K  R  S  R  Y  G  L  K  I  P  F  I  K  L  I  N  A  A  G  A  F  V  R  P  K  D  I  T  T  N  S  *  C  P  Y  L  V  R  K  A  V  F  G  T  S  V  A  R  I  F  N  *  *  *  S  D  L  K  S  I  L  E  K  T  Q  A  P  C  N  *  S  N  K  S  S  M  R  G  S  G  Y  L  F  L  I  V  T  F  F  N  C  R  *  S  M  H  I  R  K  L  P  S  F  F  F  T  N  K  T  G  A  P  Q  G  D  A  L  G  L  M  K  P  L  L  N  N  F  *  S  W  V  F  N  S  L  N  S  A  G  A  I  L  *  G  G  I  E  M  G  R  V </second_frame>
            <third_frame>   I  P  *  E  I  G  R  S  S  *  L  T  Q  Q  S  S  L  F  L  T  H  *  *  V  L  P  N  S  S  L  S  Q  S  *  K  N  P  P  S  L  H  P  *  K  P  R  V  P  R  R  T  L  H  L  A  K  T  H  T  *  R  T  W  H  K  A  F  S  P  S  T  F  P  I  Q  F  S  N  A  P  H  V  P  S  Y  F  *  S  I  S  V  Y  H  Q  *  I  R  L  Q  R  D  P  D  M  A  *  K  S  R  S  S  S  S  *  M  Q  Q  G  H  S  *  D  Q  K  T  S  L  Q  I  R  N  A  H  T  W  F  E  K  Q  S  L  A  H  P  L  P  V  F  S  I  D  D  S  R  I  S  S  Q  S  *  R  K  H  K  H  L  V  T  D  R  T  S  H  Q  C  E  E  V  D  T  C  S  *  *  L  P  F  S  T  A  G  S  L  C  T  S  E  N  F  H  P  S  S  S  Q  T  K  P  E  H  P  K  E  M  H  L  V  L  *  S  L  C  S  T  T  F  E  V  G  S  L  T  L  L  T  P  R  E  P  F  Y  K  G  V  *  K  W  G  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0040F08.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72184" stop="72522"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>336</number_coding_nucleotides>
                  <number_encoded_amino_acids>112</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PKLTLRELGIKLFLPQHFQYNSQMLLMFLLTFRVYQYIINKYDYKEIQIWLKNPVHQAHKCSRGIRKTKRHHYKFVMPIPGSKSSLWHIRCPYFQLMIVGSQVNLRENTSTL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="73011" PGL_stop="73341"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73011" e_stop="73341"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.918"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.918">
            <gDNA_exon_boundary e_start="73011" e_stop="73341" e_length="331"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73011" stop="73341"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352716" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GATCTGTCCCAGATTTTGCTAATGTCACAGTCTTAGTATTACAATCCAAGATCGCAAAATTCGGAGAAAGCCAAGTCATACCCAAAATTACATCAAAGTCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTACTCCCCACAAAAGTCACCAAACAAGACCTATACACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGTAATTCACAATGTAAATTAAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAA</gDNA_template>
            <first_frame> D  L  S  Q  I  L  L  M  S  Q  S  *  Y  Y  N  P  R  S  Q  N  S  E  K  A  K  S  Y  P  K  L  H  Q  S  Q  P  F  L  R  *  P  N  L  H  K  C  Y  S  P  Q  K  S  P  N  K  T  Y  T  L  F  Q  L  S  Q  T  H  P  P  E  *  K  H  E  *  A  C  Q  V  I  H  N  V  N  *  D  H  *  Q  M  R  K  I  H  K  K  M  W  I  Q  D  Q  T  I  Q  K  P  C  N  H  K  P  </first_frame>
            <second_frame>  I  C  P  R  F  C  *  C  H  S  L  S  I  T  I  Q  D  R  K  I  R  R  K  P  S  H  T  Q  N  Y  I  K  V  N  H  F  *  D  N  Q  I  Y  I  S  V  T  P  H  K  S  H  Q  T  R  P  I  H  F  F  N  Y  H  R  L  T  H  R  S  R  N  T  N  R  H  V  K  *  F  T  M  *  I  K  T  I  S  K  *  G  R  Y  I  R  K  C  G  S  R  I  K  Q  Y  R  S  H  A  I  T  N  Q </second_frame>
            <third_frame>   S  V  P  D  F  A  N  V  T  V  L  V  L  Q  S  K  I  A  K  F  G  E  S  Q  V  I  P  K  I  T  S  K  S  T  I  S  K  I  T  K  S  T  *  V  L  L  P  T  K  V  T  K  Q  D  L  Y  T  F  S  T  I  T  D  S  P  T  G  V  E  T  R  I  G  M  S  S  N  S  Q  C  K  L  R  P  L  A  N  E  E  D  T  *  E  N  V  D  P  G  S  N  N  T  E  A  M  Q  S  Q  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0040F08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="74994" PGL_stop="74709"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74994" e_stop="74709"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.930"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.930">
            <gDNA_exon_boundary e_start="74994" e_stop="74709" e_length="286"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74994" stop="74709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355114" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTAGGTTCGTTGGTCTCATCACACAAGAACGAGTCTTGTAGAGTCTTAAGGAACGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGACTTTAGGAAAATTTCATTCTTTCTTTCTTTCTTTCGTGCTACTACTTGAATTTAATTGGTATCTAGGTGATACAAATTGGTATCTGACCATCTTCACTCTATTTCGCAGATGGTTAGAACTAGAGCAACGACTGCGCCAACACCAACACCGGCAAGACAAGAAACGTCTGAGCCAGCCACTGGGGTTGTGG</gDNA_template>
            <first_frame> L  G  S  L  V  S  S  H  K  N  E  S  C  R  V  L  R  N  G  R  G  T  P  L  L  F  F  E  R  L  *  D  F  R  K  I  S  F  F  L  S  F  F  R  A  T  T  *  I  *  L  V  S  R  *  Y  K  L  V  S  D  H  L  H  S  I  S  Q  M  V  R  T  R  A  T  T  A  P  T  P  T  P  A  R  Q  E  T  S  E  P  A  T  G  V  V  </first_frame>
            <second_frame>  *  V  R  W  S  H  H  T  R  T  S  L  V  E  S  *  G  T  V  G  G  R  L  Y  F  S  L  R  G  Y  K  T  L  G  K  F  H  S  F  F  L  S  F  V  L  L  L  E  F  N  W  Y  L  G  D  T  N  W  Y  L  T  I  F  T  L  F  R  R  W  L  E  L  E  Q  R  L  R  Q  H  Q  H  R  Q  D  K  K  R  L  S  Q  P  L  G  L  W </second_frame>
            <third_frame>   R  F  V  G  L  I  T  Q  E  R  V  L  *  S  L  K  E  R  *  G  D  A  F  T  F  L  *  E  A  I  R  L  *  E  N  F  I  L  S  F  F  L  S  C  Y  Y  L  N  L  I  G  I  *  V  I  Q  I  G  I  *  P  S  S  L  Y  F  A  D  G  *  N  *  S  N  D  C  A  N  T  N  T  G  K  T  R  N  V  *  A  S  H  W  G  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0040F08.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74945" stop="74709"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GTVGGRLYFSLRGYKTLGKFHSFFLSFVLLLEFNWYLGDTNWYLTIFTLFRRWLELEQRLRQHQHRQDKKRLSQPLGLW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="86093" PGL_stop="75646"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="86093" e_stop="85724"/>
            <exon e_start="75995" e_stop="75646"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.900"/>
          <exon-only e_score="0.926"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.900">
            <gDNA_exon_boundary e_start="86093" e_stop="85724" e_length="370"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="85723" i_stop="75996" i_length="9728"/>
          </intron>
          <exon e_serial="2" e_score="0.926">
            <gDNA_exon_boundary e_start="75995" e_stop="75646" e_length="350"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86093" stop="85724"/>
              <exon start="75995" stop="75646"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349726" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAATCTTCGGTGGAGGTAGGTTATGATTTTTATGTTATTCGTAGTAAACTCTTAATAGTGAATGATATGTATTGGTAGTATTGTAAACCCTGCTATATGCTTAATTATATGCTTGCATGAATGTGATTATATGATTGTGATCAAATAAGCATGATGAAGCTATTGAATCCCAAATCTTGATAAAAACCTAATCTCTTTGTTAATGATGATGCCTTGGTATAAAAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAGAAAGAAGGCTTGATGAATTAATAGAATGAGATTAGTGGGGCGGGTGTCACGAACTGACACATAGAATTAGGGGATCGGGTGTCACGAACCGATACGTAG : ATTAAGGGATCGGGTGTCACGAACCGACACGTAGTATTATGAGGACCGGGTGTCATGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACTGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGAGTGTCACGTTCCGACACATAGTAGTAGGGGATCGGAGTTTCACGTACCGACACAAGAGGATTAACGAATATGAGGGAGCGGAGTGTCACGTACCGACACAATAGAAATAAAGATAATGAATCTTGAAAAGATGTTAATATACTCAATCTAATGAATCTAA</gDNA_template>
            <first_frame> *  S  S  V  E  V  G  Y  D  F  Y  V  I  R  S  K  L  L  I  V  N  D  M  Y  W  *  Y  C  K  P  C  Y  M  L  N  Y  M  L  A  *  M  *  L  Y  D  C  D  Q  I  S  M  M  K  L  L  N  P  K  S  *  *  K  P  N  L  F  V  N  D  D  A  L  V  *  K  K  A  *  *  T  K  V  M  R  L  M  M  P  W  *  E  R  R  L  D  E  L  I  E  *  D  *  W  G  G  C  H  E  L  T  H  R  I  R  G  S  G  V  T  N  R  Y  V   : D  *  G  I  G  C  H  E  P  T  R  S  I  M  R  T  G  C  H  E  P  T  R  R  F  R  G  S  G  V  T  N  R  H  V  D  L  G  D  R  V  S  R  T  D  T  *  I  *  G  I  G  C  H  E  P  T  R  R  F  R  G  S  E  C  H  V  P  T  H  S  S  R  G  S  E  F  H  V  P  T  Q  E  D  *  R  I  *  G  S  G  V  S  R  T  D  T  I  E  I  K  I  M  N  L  E  K  M  L  I  Y  S  I  *  *  I  * </first_frame>
            <second_frame>  N  L  R  W  R  *  V  M  I  F  M  L  F  V  V  N  S  *  *  *  M  I  C  I  G  S  I  V  N  P  A  I  C  L  I  I  C  L  H  E  C  D  Y  M  I  V  I  K  *  A  *  *  S  Y  *  I  P  N  L  D  K  N  L  I  S  L  L  M  M  M  P  W  Y  K  R  R  L  D  E  L  K  *  *  D  *  *  C  L  G  K  K  E  G  L  M  N  *  *  N  E  I  S  G  A  G  V  T  N  *  H  I  E  L  G  D  R  V  S  R  T  D  T  *  :  I  K  G  S  G  V  T  N  R  H  V  V  L  *  G  P  G  V  M  N  R  H  V  D  L  G  D  R  V  S  R  T  D  T  *  I  *  G  I  G  C  H  E  L  T  R  R  F  R  G  S  G  V  T  N  R  H  V  D  L  G  D  R  S  V  T  F  R  H  I  V  V  G  D  R  S  F  T  Y  R  H  K  R  I  N  E  Y  E  G  A  E  C  H  V  P  T  Q  *  K  *  R  *  *  I  L  K  R  C  *  Y  T  Q  S  N  E  S   </second_frame>
            <third_frame>   I  F  G  G  G  R  L  *  F  L  C  Y  S  *  *  T  L  N  S  E  *  Y  V  L  V  V  L  *  T  L  L  Y  A  *  L  Y  A  C  M  N  V  I  I  *  L  *  S  N  K  H  D  E  A  I  E  S  Q  I  L  I  K  T  *  S  L  C  *  *  *  C  L  G  I  K  E  G  L  M  N  *  S  N  E  I  D  D  A  L  V  R  K  K  A  *  *  I  N  R  M  R  L  V  G  R  V  S  R  T  D  T  *  N  *  G  I  G  C  H  E  P  I  R  R :   L  R  D  R  V  S  R  T  D  T  *  Y  Y  E  D  R  V  S  *  T  D  T  *  I  *  G  I  G  C  H  E  P  T  R  R  F  R  G  S  G  V  T  N  *  H  V  D  L  G  D  R  V  S  R  T  D  T  *  I  *  G  I  G  V  S  R  S  D  T  *  *  *  G  I  G  V  S  R  T  D  T  R  G  L  T  N  M  R  E  R  S  V  T  Y  R  H  N  R  N  K  D  N  E  S  *  K  D  V  N  I  L  N  L  M  N  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0040F08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="95534" PGL_stop="95870"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="95534" e_stop="95870"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.911"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.911">
            <gDNA_exon_boundary e_start="95534" e_stop="95870" e_length="337"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95534" stop="95870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357033" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACTGAGTAGATATCATCGGCCAACTCAAAATAGAAATCAATATATACCAAGTAATATCATAAAATCAACTATGATACTCAACATGTAGCAACAGCAAGTACTATATCATTAACAATTACCGTCAAGTTCACACATGAGGACTCAAGCCTCAATACCGTACTCATTTGGGAATTATGTTCATTAGATTAAGTATATTAACATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGTCGGTACGTGACACTCCGCTCCCTCATATTCATTAATCCTCTTGTGTCGGTACGTGACACTCCGATCCCCTAATTCTACGTGTCGGTTCGTGACACCCGATCC</gDNA_template>
            <first_frame> T  E  *  I  S  S  A  N  S  K  *  K  S  I  Y  T  K  *  Y  H  K  I  N  Y  D  T  Q  H  V  A  T  A  S  T  I  S  L  T  I  T  V  K  F  T  H  E  D  S  S  L  N  T  V  L  I  W  E  L  C  S  L  D  *  V  Y  *  H  L  S  R  F  I  I  F  I  S  L  V  S  V  R  D  T  P  L  P  H  I  H  *  S  S  C  V  G  T  *  H  S  D  P  L  I  L  R  V  G  S  *  H  P  I  </first_frame>
            <second_frame>  L  S  R  Y  H  R  P  T  Q  N  R  N  Q  Y  I  P  S  N  I  I  K  S  T  M  I  L  N  M  *  Q  Q  Q  V  L  Y  H  *  Q  L  P  S  S  S  H  M  R  T  Q  A  S  I  P  Y  S  F  G  N  Y  V  H  *  I  K  Y  I  N  I  F  Q  D  S  L  S  L  F  L  L  C  R  Y  V  T  L  R  S  L  I  F  I  N  P  L  V  S  V  R  D  T  P  I  P  *  F  Y  V  S  V  R  D  T  R  S </second_frame>
            <third_frame>   *  V  D  I  I  G  Q  L  K  I  E  I  N  I  Y  Q  V  I  S  *  N  Q  L  *  Y  S  T  C  S  N  S  K  Y  Y  I  I  N  N  Y  R  Q  V  H  T  *  G  L  K  P  Q  Y  R  T  H  L  G  I  M  F  I  R  L  S  I  L  T  S  F  K  I  H  Y  L  Y  F  S  C  V  G  T  *  H  S  A  P  S  Y  S  L  I  L  L  C  R  Y  V  T  L  R  S  P  N  S  T  C  R  F  V  T  P  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0040F08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="100874" PGL_stop="101426"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="100874" e_stop="101426"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.926"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.926">
            <gDNA_exon_boundary e_start="100874" e_stop="101426" e_length="553"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100874" stop="101426"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329287" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCCTAGCCCATCTGGTACTAGGGCGGTGACTCCTCTACCGACTGAGGAAATAGTAAGAGAAGGGGAGGATGGAGAGAATGAACAAGTGCAGAATGAGGAAATGCCACCCCAACCTACCCCAGAGATGATCAATCAGATCTGGCTTATCTTAGCGGGTTATCTGATCAGGCCCAGACACCTCCAGTATTTTCTGCACCAGCACCTCAGGGTCTGGAGGTTCAACATGCGGCTACTATGGCTCCCCGCATGGATGCCTCATTGGAAATAGGCACGTTTCCTCGTCTGACTACAGGGCCTATAATGATAAATGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCTGAATCTGAGGATGCCTACGATTTTCTGGTTGACTATCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTAGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCATCATTCT</gDNA_template>
            <first_frame> A  *  P  I  W  Y  *  G  G  D  S  S  T  D  *  G  N  S  K  R  R  G  G  W  R  E  *  T  S  A  E  *  G  N  A  T  P  T  Y  P  R  D  D  Q  S  D  L  A  Y  L  S  G  L  S  D  Q  A  Q  T  P  P  V  F  S  A  P  A  P  Q  G  L  E  V  Q  H  A  A  T  M  A  P  R  M  D  A  S  L  E  I  G  T  F  P  R  L  T  T  G  P  I  M  I  N  D  Q  H  E  L  F  S  K  F  L  K  L  K  P  P  V  F  K  G  A  E  S  E  D  A  Y  D  F  L  V  D  Y  H  E  L  L  H  K  M  G  I  V  E  R  L  G  V  E  F  V  T  Y  Q  F  Q  G  N  A  K  M  W  W  R  S  H  V  E  C  Q  P  T  E  A  P  P  M  T  W  A  S  F  </first_frame>
            <second_frame>  P  S  P  S  G  T  R  A  V  T  P  L  P  T  E  E  I  V  R  E  G  E  D  G  E  N  E  Q  V  Q  N  E  E  M  P  P  Q  P  T  P  E  M  I  N  Q  I  W  L  I  L  A  G  Y  L  I  R  P  R  H  L  Q  Y  F  L  H  Q  H  L  R  V  W  R  F  N  M  R  L  L  W  L  P  A  W  M  P  H  W  K  *  A  R  F  L  V  *  L  Q  G  L  *  *  *  M  I  S  M  N  F  S  V  S  S  *  N  *  N  L  Q  S  S  R  V  L  N  L  R  M  P  T  I  F  W  L  T  I  M  S  Y  Y  T  R  W  V  *  *  N  G  *  V  L  S  L  *  L  I  S  F  K  G  T  P  K  C  G  G  G  H  M  L  S  V  N  Q  Q  R  H  H  L  *  L  G  H  H  S </second_frame>
            <third_frame>   L  A  H  L  V  L  G  R  *  L  L  Y  R  L  R  K  *  *  E  K  G  R  M  E  R  M  N  K  C  R  M  R  K  C  H  P  N  L  P  Q  R  *  S  I  R  S  G  L  S  *  R  V  I  *  S  G  P  D  T  S  S  I  F  C  T  S  T  S  G  S  G  G  S  T  C  G  Y  Y  G  S  P  H  G  C  L  I  G  N  R  H  V  S  S  S  D  Y  R  A  Y  N  D  K  *  S  A  *  T  F  Q  *  V  L  E  I  E  T  S  S  L  Q  G  C  *  I  *  G  C  L  R  F  S  G  *  L  S  *  A  T  T  Q  D  G  Y  S  R  T  V  R  C  *  V  C  D  L  S  V  S  R  E  R  Q  N  V  V  A  V  T  C  *  V  S  T  N  R  G  T  T  Y  D  L  G  I  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0040F08.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100970" stop="101425"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>456</number_coding_nucleotides>
                  <number_encoded_amino_acids>152</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GNATPTYPRDDQSDLAYLSGLSDQAQTPPVFSAPAPQGLEVQHAATMAPRMDASLEIGTFPRLTTGPIMINDQHELFSKFLKLKPPVFKGAESEDAYDFLVDYHELLHKMGIVERLGVEFVTYQFQGNAKMWWRSHVECQPTEAPPMTWASF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="103517" PGL_stop="100931"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="103517" e_stop="100931"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.906"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.906">
            <gDNA_exon_boundary e_start="103517" e_stop="100931" e_length="2587"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103517" stop="102804"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103517" stop="102921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103517" stop="102992"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103446" stop="102766"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103446" stop="103091"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240817" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102927" stop="102166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355244" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102927" stop="102267"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351414" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102524" stop="102194"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352716" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102317" stop="101759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102233" stop="101444"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356912" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102231" stop="101698"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353805" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101593" stop="100931"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352401" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAATCCCTTGACAAATCGACGGTAATAGCTAGCTAAACCAACAAAGCTCCTTATTTCTGACACACTAGTAGGTCTTGCCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACCCCTTCCTTAGAAACTACATGCCCCAAGAAGGACACTACATCTAGCCAAAACTCACATTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATAAAATCTTCAAATGCTCCTCATGTTCCTTCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTTGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTTGTTCGAAAAGCAGTCTTTGGCATATCCGTTGCCTCGTATTTTCAATTGATGATAACCGAATCTCAAGTCAATCTTAGAGAAGACACAAGCCCCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTAATAGTTACCTTGTTCAACTGCCGATAGTCTATGCACATCCGAAAACTTCCATCCTTCTTCTTCACAAACAAAACTGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAGCAACTCTTGAAGTTGGGCCTTTAACTATCTTAACTCCGCGGGAGCCATTCTATAAGGGGATATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACCGAAGTCAATATCCCTATCCGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACGGACTACCGAAACCGACTCAATCGAAGGAACTTGGGTAGTATCATCCCGGAGGTGCGCCAAGAAAGTTAGACAACCCTTACTAACCATCTTCTTAGCACGAAAAAAGGAGACGATACGAACCAGATTGGAAGTGTAGTCGCCCTCCCATACTAACGGATCTATCACAGGCTTGGCTAACGTCACTTTTTTAGCATTACAATCCAAAATCGCAAAATTCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAATTCAACCATTTCTAAGATAACCAAATCTACATGAGTGTTACTCCCTATAAAAGTCACCAAACAAGACCTATACACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGTAATTCACAATGTAAATTAAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCGGGATCGAACAATACAGAAGTCATGCAATCACAAACAAAAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCAGTCCATTGCCCCTACCATGTTGTGATATAGTGGCTCCAGTTTGCCCATCACCCCAGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCCATTGGGGGTCTATAACTCTATTTTGGACAATTCCTCCTAATATGTCCAGTCTCCCCACATCTATAACACTCTCTGGAGTCAGGCATAGGTCTCTTAGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTATAGTCTGTAGTGAAGACTGAATTGGTCGAACTGAGTAACCTCCTGAACCCTGTCCTCTAGAGTAAGAACCATTAAACTCACCTCCCTTTCAAAACCCTTTTGATGTAGTTGCCATGGTGAAGTCATCTGGCTTTACTCCCTCTACCTCTATCACGAAGTCTACCACTTCTTGGAAAGATTTCGCTATAGCGGCTACCTGCAAGGCTGAAATCTGCAACTCTAACCTCAACCCCTTCACAAAACAGCGAATCCGCTCTTGTGGACTGAAACAAAGCTGAGTGGCATATCTGGAAAGTGCATGAAACTTAGCCTCATATGCAGTAACCGACATCCTACCTTGCTCTAGGCTCAAGAATTCATCTCTTTTCCTATCCCTCAAGGTCCGGGGAATATACTTCTCCATAAACAAGCTAGAGAATGATGCCCAAGTCATAGGTGGTGCCTCTGTTGGTTGACACTCAACATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAAGTCACAAACTCAACACCTAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCATGATAGTCAACCAGAAAATCGTAGGCATCCTCAGATTCAGCACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTATCATTATAGGCCCTGTAGTCAGACGAGGAAACGTGCCTATTTCCAATGAGGCATCCATGCGGGGAGCCATAGTAGCCGCATGTTGAACCTCCAGACCCTGAGGTGCTGGTGCAGAAAATACTGGAGGTGTCTGGGCCTGATCAGATAACCCGCTAAGATAAGCCAGATCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTCTGCACTTGTTCATTCTCTCCATCCTCCCCTTCT</gDNA_template>
            <first_frame> E  S  L  D  K  S  T  V  I  A  S  *  T  N  K  A  P  Y  F  *  H  T  S  R  S  C  P  I  L  H  C  L  N  L  R  R  I  H  H  H  P  F  L  R  N  Y  M  P  Q  E  G  H  Y  I  *  P  K  L  T  F  R  E  L  G  I  K  L  F  L  P  Q  H  F  *  *  N  L  Q  M  L  L  M  F  L  L  T  F  R  V  Y  Q  Y  I  I  N  K  Y  D  H  E  E  V  Q  I  W  L  K  N  P  V  H  Q  A  H  E  R  S  R  G  I  C  K  T  K  R  H  H  Y  K  F  V  M  P  I  P  C  S  K  S  S  L  W  H  I  R  C  L  V  F  S  I  D  D  N  R  I  S  S  Q  S  *  R  R  H  K  P  L  V  T  D  R  T  S  H  Q  C  E  E  E  D  T  C  S  *  *  L  P  C  S  T  A  D  S  L  C  T  S  E  N  F  H  P  S  S  S  Q  T  K  L  E  H  P  K  E  M  H  L  V  *  *  S  L  C  S  A  T  L  E  V  G  P  L  T  I  L  T  P  R  E  P  F  Y  K  G  I  *  K  W  G  E  Y  P  V  Q  D  Q  Y  R  S  Q  Y  P  Y  P  V  A  Y  Q  E  D  L  Q  G  T  H  P  K  T  H  G  L  P  K  P  T  Q  S  K  E  L  G  *  Y  H  P  G  G  A  P  R  K  L  D  N  P  Y  *  P  S  S  *  H  E  K  R  R  R  Y  E  P  D  W  K  C  S  R  P  P  I  L  T  D  L  S  Q  A  W  L  T  S  L  F  *  H  Y  N  P  K  S  Q  N  S  E  K  A  K  S  Y  P  E  L  H  Q  I  Q  P  F  L  R  *  P  N  L  H  E  C  Y  S  L  *  K  S  P  N  K  T  Y  T  L  F  Q  L  S  Q  T  H  P  P  E  *  K  H  E  *  A  C  Q  V  I  H  N  V  N  *  D  H  *  Q  M  R  K  I  H  K  K  M  W  I  R  D  R  T  I  Q  K  S  C  N  H  K  Q  K  D  Y  L  *  *  Q  H  Q  M  P  P  L  Q  T  A  Q  G  K  R  N  N  G  P  Y  R  L  S  V  H  C  P  Y  H  V  V  I  *  W  L  Q  F  A  H  H  P  S  R  F  G  D  H  H  Y  L  D  H  H  V  L  Q  N  N  G  L  Y  H  D  H  L  Y  L  *  P  L  G  V  Y  N  S  I  L  D  N  S  S  *  Y  V  Q  S  P  H  I  Y  N  T  L  W  S  Q  A  *  V  S  *  R  S  V  D  R  S  E  V  D  P  Q  L  *  S  V  V  K  T  E  L  V  E  L  S  N  L  L  N  P  V  L  *  S  K  N  H  *  T  H  L  P  F  K  T  L  L  M  *  L  P  W  *  S  H  L  A  L  L  P  L  P  L  S  R  S  L  P  L  L  G  K  I  S  L  *  R  L  P  A  R  L  K  S  A  T  L  T  S  T  P  S  Q  N  S  E  S  A  L  V  D  *  N  K  A  E  W  H  I  W  K  V  H  E  T  *  P  H  M  Q  *  P  T  S  Y  L  A  L  G  S  R  I  H  L  F  S  Y  P  S  R  S  G  E  Y  T  S  P  *  T  S  *  R  M  M  P  K  S  *  V  V  P  L  L  V  D  T  Q  H  V  T  A  T  T  F  W  R  S  L  E  T  D  K  S  Q  T  Q  H  L  T  V  L  L  Y  P  S  C  V  V  A  H  D  S  Q  P  E  N  R  R  H  P  Q  I  Q  H  P  *  R  L  E  V  S  I  S  R  T  Y  *  K  V  H  A  D  H  L  S  L  *  A  L  *  S  D  E  E  T  C  L  F  P  M  R  H  P  C  G  E  P  *  *  P  H  V  E  P  P  D  P  E  V  L  V  Q  K  I  L  E  V  S  G  P  D  Q  I  T  R  *  D  K  P  D  L  I  D  H  L  W  G  R  L  G  W  H  F  L  I  L  H  L  F  I  L  S  I  L  P  F  </first_frame>
            <second_frame>  N  P  L  T  N  R  R  *  *  L  A  K  P  T  K  L  L  I  S  D  T  L  V  G  L  A  Q  F  F  T  V  S  I  L  E  G  S  T  I  T  P  S  L  E  T  T  C  P  K  K  D  T  T  S  S  Q  N  S  H  L  E  N  L  A  *  S  F  F  S  L  N  I  S  N  K  I  F  K  C  S  S  C  S  F  L  L  L  E  Y  I  S  I  S  S  I  N  T  I  T  K  R  S  K  Y  G  L  K  I  P  F  I  K  L  M  N  A  A  G  A  F  V  R  P  K  D  I  T  T  N  S  *  C  P  Y  L  V  R  K  A  V  F  G  I  S  V  A  S  Y  F  Q  L  M  I  T  E  S  Q  V  N  L  R  E  D  T  S  P  L  *  L  I  E  Q  V  I  N  A  R  K  R  I  L  V  L  N  S  Y  L  V  Q  L  P  I  V  Y  A  H  P  K  T  S  I  L  L  L  H  K  Q  N  W  S  T  P  R  R  C  T  W  S  N  E  A  F  A  Q  Q  L  L  K  L  G  L  *  L  S  *  L  R  G  S  H  S  I  R  G  Y  R  N  G  A  S  T  R  F  K  I  N  T  E  V  N  I  P  I  R  W  H  T  R  K  I  C  R  E  H  I  Q  K  L  T  D  Y  R  N  R  L  N  R  R  N  L  G  S  I  I  P  E  V  R  Q  E  S  *  T  T  L  T  N  H  L  L  S  T  K  K  G  D  D  T  N  Q  I  G  S  V  V  A  L  P  Y  *  R  I  Y  H  R  L  G  *  R  H  F  F  S  I  T  I  Q  N  R  K  I  R  R  K  P  S  H  T  Q  N  Y  I  K  F  N  H  F  *  D  N  Q  I  Y  M  S  V  T  P  Y  K  S  H  Q  T  R  P  I  H  F  F  N  Y  H  R  L  T  H  R  S  R  N  T  N  R  H  V  K  *  F  T  M  *  I  K  T  I  S  K  *  G  R  Y  I  R  K  C  G  S  G  I  E  Q  Y  R  S  H  A  I  T  N  K  K  I  T  C  D  D  S  I  R  C  L  R  F  R  P  P  R  E  S  V  T  M  G  P  I  V  C  Q  S  I  A  P  T  M  L  *  Y  S  G  S  S  L  P  I  T  P  A  V  L  V  T  T  I  T  S  T  T  T  S  S  R  I  T  A  S  T  M  T  T  S  T  S  S  H  W  G  S  I  T  L  F  W  T  I  P  P  N  M  S  S  L  P  T  S  I  T  L  S  G  V  R  H  R  S  L  R  E  V  L  T  G  L  R  W  T  P  N  Y  S  L  *  *  R  L  N  W  S  N  *  V  T  S  *  T  L  S  S  R  V  R  T  I  K  L  T  S  L  S  K  P  F  *  C  S  C  H  G  E  V  I  W  L  Y  S  L  Y  L  Y  H  E  V  Y  H  F  L  E  R  F  R  Y  S  G  Y  L  Q  G  *  N  L  Q  L  *  P  Q  P  L  H  K  T  A  N  P  L  L  W  T  E  T  K  L  S  G  I  S  G  K  C  M  K  L  S  L  I  C  S  N  R  H  P  T  L  L  *  A  Q  E  F  I  S  F  P  I  P  Q  G  P  G  N  I  L  L  H  K  Q  A  R  E  *  C  P  S  H  R  W  C  L  C  W  L  T  L  N  M  *  P  P  P  H  F  G  V  P  L  K  L  I  S  H  K  L  N  T  *  P  F  Y  Y  T  H  L  V  *  *  L  M  I  V  N  Q  K  I  V  G  I  L  R  F  S  T  L  E  D  W  R  F  Q  F  Q  E  L  T  E  K  F  M  L  I  I  Y  H  Y  R  P  C  S  Q  T  R  K  R  A  Y  F  Q  *  G  I  H  A  G  S  H  S  S  R  M  L  N  L  Q  T  L  R  C  W  C  R  K  Y  W  R  C  L  G  L  I  R  *  P  A  K  I  S  Q  I  *  L  I  I  S  G  V  G  W  G  G  I  S  S  F  C  T  C  S  F  S  P  S  S  P  S </second_frame>
            <third_frame>   I  P  *  Q  I  D  G  N  S  *  L  N  Q  Q  S  S  L  F  L  T  H  *  *  V  L  P  N  S  S  L  S  Q  S  *  K  D  P  P  S  P  L  P  *  K  L  H  A  P  R  R  T  L  H  L  A  K  T  H  I  *  R  T  W  H  K  A  F  S  P  S  T  F  L  I  K  S  S  N  A  P  H  V  P  S  Y  F  *  S  I  S  V  Y  H  Q  *  I  R  S  R  R  G  P  N  M  A  *  K  S  R  S  S  S  S  *  T  Q  Q  G  H  L  *  D  Q  K  T  S  L  Q  I  R  N  A  H  T  L  F  E  K  Q  S  L  A  Y  P  L  P  R  I  F  N  *  *  *  P  N  L  K  S  I  L  E  K  T  Q  A  P  C  N  *  S  N  K  S  S  M  R  G  R  G  Y  L  F  L  I  V  T  L  F  N  C  R  *  S  M  H  I  R  K  L  P  S  F  F  F  T  N  K  T  G  A  P  Q  G  D  A  L  G  L  M  K  P  L  L  S  N  S  *  S  W  A  F  N  Y  L  N  S  A  G  A  I  L  *  G  D  I  E  M  G  R  V  P  G  S  R  S  I  P  K  S  I  S  L  S  G  G  I  P  G  R  S  A  G  N  T  S  K  N  S  R  T  T  E  T  D  S  I  E  G  T  W  V  V  S  S  R  R  C  A  K  K  V  R  Q  P  L  L  T  I  F  L  A  R  K  K  E  T  I  R  T  R  L  E  V  *  S  P  S  H  T  N  G  S  I  T  G  L  A  N  V  T  F  L  A  L  Q  S  K  I  A  K  F  G  E  S  Q  V  I  P  R  I  T  S  N  S  T  I  S  K  I  T  K  S  T  *  V  L  L  P  I  K  V  T  K  Q  D  L  Y  T  F  S  T  I  T  D  S  P  T  G  V  E  T  R  I  G  M  S  S  N  S  Q  C  K  L  R  P  L  A  N  E  E  D  T  *  E  N  V  D  P  G  S  N  N  T  E  V  M  Q  S  Q  T  K  R  L  P  V  M  T  A  S  D  A  S  A  S  D  R  P  G  K  A  *  Q  W  A  L  S  F  V  S  P  L  P  L  P  C  C  D  I  V  A  P  V  C  P  S  P  Q  P  F  W  *  P  P  L  P  R  P  P  R  P  P  E  *  R  P  L  P  *  P  P  L  P  L  A  I  G  G  L  *  L  Y  F  G  Q  F  L  L  I  C  P  V  S  P  H  L  *  H  S  L  E  S  G  I  G  L  L  E  K  C  *  P  V  *  G  G  P  P  T  I  V  C  S  E  D  *  I  G  R  T  E  *  P  P  E  P  C  P  L  E  *  E  P  L  N  S  P  P  F  Q  N  P  F  D  V  V  A  M  V  K  S  S  G  F  T  P  S  T  S  I  T  K  S  T  T  S  W  K  D  F  A  I  A  A  T  C  K  A  E  I  C  N  S  N  L  N  P  F  T  K  Q  R  I  R  S  C  G  L  K  Q  S  *  V  A  Y  L  E  S  A  *  N  L  A  S  Y  A  V  T  D  I  L  P  C  S  R  L  K  N  S  S  L  F  L  S  L  K  V  R  G  I  Y  F  S  I  N  K  L  E  N  D  A  Q  V  I  G  G  A  S  V  G  *  H  S  T  C  D  R  H  H  I  L  A  F  P  *  N  *  *  V  T  N  S  T  P  N  R  S  T  I  P  I  L  C  S  S  S  *  *  S  T  R  K  S  *  A  S  S  D  S  A  P  L  K  T  G  G  F  N  F  K  N  L  L  K  S  S  C  *  S  F  I  I  I  G  P  V  V  R  R  G  N  V  P  I  S  N  E  A  S  M  R  G  A  I  V  A  A  C  *  T  S  R  P  *  G  A  G  A  E  N  T  G  G  V  W  A  *  S  D  N  P  L  R  *  A  R  S  D  *  S  S  L  G  *  V  G  V  A  F  P  H  S  A  L  V  H  S  L  H  P  P  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0040F08.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="103292" stop="103035"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLQMLLMFLLTFRVYQYIINKYDHEEVQIWLKNPVHQAHERSRGICKTKRHHYKFVMPIPCSKSSLWHIRCLVFSIDDNRISSQS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0040F08.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102085" stop="101831"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YSGSSLPITPAVLVTTITSTTTSSRITASTMTTSTSSHWGSITLFWTIPPNMSSLPTSITLSGVRHRSLREVLTGLRWTPNYSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0040F08.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102789" stop="102544"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GDIEMGRVPGSRSIPKSISLSGGIPGRSAGNTSKNSRTTETDSIEGTWVVSSRRCAKKVRQPLLTIFLARKKETIRTRLEV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0040F08.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="101775" stop="101563"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EPLNSPPFQNPFDVVAMVKSSGFTPSTSITKSTTSWKDFAIAATCKAEICNSNLNPFTKQRIRSCGLKQS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0040F08.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="5"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102811" stop="102611"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LRGSHSIRGYRNGASTRFKINTEVNIPIRWHTRKICREHIQKLTDYRNRLNRRNLGSIIPEVRQES*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0040F08.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="6"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="103321" stop="103124"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFFSLNISNKIFKCSSCSFLLLEYISISSINTITKRSKYGLKIPFIKLMNAAGAFVRPKDITTNS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="104998" PGL_stop="104822"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="104998" e_stop="104822"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.915"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.915">
            <gDNA_exon_boundary e_start="104998" e_stop="104822" e_length="177"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104998" stop="104822"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577888" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTACATCTCCTCCCATACAATGCTTCGAAAGGAGCCATATCAATACTTGAGTGATAGCTATTGTTGTAGGAGAACTCTGCTAAGGGTAAGAAGTTATCTCAATGACCACCAAATTCTATCACACATGCACGAAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</gDNA_template>
            <first_frame> L  H  L  L  P  Y  N  A  S  K  G  A  I  S  I  L  E  *  *  L  L  L  *  E  N  S  A  K  G  K  K  L  S  Q  *  P  P  N  S  I  T  H  A  R  S  I  S  S  N  T  *  I  V  R  S  D  *  P  S </first_frame>
            <second_frame>  Y  I  S  S  H  T  M  L  R  K  E  P  Y  Q  Y  L  S  D  S  Y  C  C  R  R  T  L  L  R  V  R  S  Y  L  N  D  H  Q  I  L  S  H  M  H  E  A  Y  P  P  T  L  E  S  F  A  Q  T  D  H   </second_frame>
            <third_frame>   T  S  P  P  I  Q  C  F  E  R  S  H  I  N  T  *  V  I  A  I  V  V  G  E  L  C  *  G  *  E  V  I  S  M  T  T  K  F  Y  H  T  C  T  K  H  I  L  Q  H  L  N  R  S  L  R  L  T  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0040F08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="107206" PGL_stop="107425"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="107206" e_stop="107425"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.927"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.927">
            <gDNA_exon_boundary e_start="107206" e_stop="107425" e_length="220"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107206" stop="107425"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298638" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCATTACTCCGGATATCAGGGTGAGCTAACGCTTCTAGCTTGGACTGGATCTTCTTCTTCATGTCTTGATGCCTTGAAGTTCCGGCATGGACTAGCTTTTTATGTATTTTAGCTTCTTAGATACTCTTAGATTTAGTAATTTGAAGTAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGAATAATAATAACTGTTTGAGTTTTTAGAAGTTATTGAA</gDNA_template>
            <first_frame> S  L  L  R  I  S  G  *  A  N  A  S  S  L  D  W  I  F  F  F  M  S  *  C  L  E  V  P  A  W  T  S  F  L  C  I  L  A  S  *  I  L  L  D  L  V  I  *  S  R  C  S  C  D  D  D  F  Q  I  L  G  I  I  I  T  V  *  V  F  R  S  Y  *  </first_frame>
            <second_frame>  H  Y  S  G  Y  Q  G  E  L  T  L  L  A  W  T  G  S  S  S  S  C  L  D  A  L  K  F  R  H  G  L  A  F  Y  V  F  *  L  L  R  Y  S  *  I  *  *  F  E  V  D  V  L  V  M  M  T  S  R  F  W  E  *  *  *  L  F  E  F  L  E  V  I  E </second_frame>
            <third_frame>   I  T  P  D  I  R  V  S  *  R  F  *  L  G  L  D  L  L  L  H  V  L  M  P  *  S  S  G  M  D  *  L  F  M  Y  F  S  F  L  D  T  L  R  F  S  N  L  K  *  M  F  L  *  *  *  L  P  D  F  G  N  N  N  N  C  L  S  F  *  K  L  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0040F08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="116905" PGL_stop="117393"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="116905" e_stop="117393"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.928"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.928">
            <gDNA_exon_boundary e_start="116905" e_stop="117393" e_length="489"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116905" stop="117393"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202664" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACCATATGTCACACAATTAACTGTAACGATTCAAAAAAAAAGAAGAGAATTATATAAATAAGAATAAATAGGTATTTAAGGGCGTAATTGTCCTTTCACGTTTTAAATGAATAAATAAATAAATAAGTAAATAAATAAAACAGATTTGTATTTATTTATTTTAAATGTTATTTGACTAATTCTTGAATTAGTCTCCTAATCCAAATAGTCCTCTCTCTCTCACGCTTCTTAACTCCCTCTCTCACGTTCTCCATCTTCCTCACATTATTTCTGCCAAAGCATCAACAGTTTTCATGCTTGAAGAACTAACAAAAAAAATTTTAAGCAAAAGAAAAAGTAATCAAAACGTCAAGGCTAAGAGAGTTTTGTCGAGAGAGGTGTACGTTGAAGTGAATTGGGAGTGATTTGGAGGAGTTTTCCGGGCAGCAACATTAAAGTTTGAACATCGATTAAGGTATGAGTTTTCTTCTCTCTTGAATCCTTTCCCA</gDNA_template>
            <first_frame> N  H  M  S  H  N  *  L  *  R  F  K  K  K  E  E  N  Y  I  N  K  N  K  *  V  F  K  G  V  I  V  L  S  R  F  K  *  I  N  K  *  I  S  K  *  I  K  Q  I  C  I  Y  L  F  *  M  L  F  D  *  F  L  N  *  S  P  N  P  N  S  P  L  S  L  T  L  L  N  S  L  S  H  V  L  H  L  P  H  I  I  S  A  K  A  S  T  V  F  M  L  E  E  L  T  K  K  I  L  S  K  R  K  S  N  Q  N  V  K  A  K  R  V  L  S  R  E  V  Y  V  E  V  N  W  E  *  F  G  G  V  F  R  A  A  T  L  K  F  E  H  R  L  R  Y  E  F  S  S  L  L  N  P  F  P </first_frame>
            <second_frame>  T  I  C  H  T  I  N  C  N  D  S  K  K  K  K  R  I  I  *  I  R  I  N  R  Y  L  R  A  *  L  S  F  H  V  L  N  E  *  I  N  K  *  V  N  K  *  N  R  F  V  F  I  Y  F  K  C  Y  L  T  N  S  *  I  S  L  L  I  Q  I  V  L  S  L  S  R  F  L  T  P  S  L  T  F  S  I  F  L  T  L  F  L  P  K  H  Q  Q  F  S  C  L  K  N  *  Q  K  K  F  *  A  K  E  K  V  I  K  T  S  R  L  R  E  F  C  R  E  R  C  T  L  K  *  I  G  S  D  L  E  E  F  S  G  Q  Q  H  *  S  L  N  I  D  *  G  M  S  F  L  L  S  *  I  L  S   </second_frame>
            <third_frame>   P  Y  V  T  Q  L  T  V  T  I  Q  K  K  R  R  E  L  Y  K  *  E  *  I  G  I  *  G  R  N  C  P  F  T  F  *  M  N  K  *  I  N  K  *  I  N  K  T  D  L  Y  L  F  I  L  N  V  I  *  L  I  L  E  L  V  S  *  S  K  *  S  S  L  S  H  A  S  *  L  P  L  S  R  S  P  S  S  S  H  Y  F  C  Q  S  I  N  S  F  H  A  *  R  T  N  K  K  N  F  K  Q  K  K  K  *  S  K  R  Q  G  *  E  S  F  V  E  R  G  V  R  *  S  E  L  G  V  I  W  R  S  F  P  G  S  N  I  K  V  *  T  S  I  K  V  *  V  F  F  S  L  E  S  F  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0040F08.1" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="117097" stop="117309"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SPNPNSPLSLTLLNSLSHVLHLPHIISAKASTVFMLEELTKKILSKRKSNQNVKAKRVLSREVYVEVNWE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 313 chains have been computed
$ 
$ memory statistics:
$ 706536 bytes spliced alignments in total
$ 59 spliced alignments have been stored
$ 11975 bytes was the average size of a spliced alignment
$ 25840 bytes predicted gene locations in total
$ 18 predicted gene locations have been stored
$ 1435 bytes was the average size of a predicted gene location
$ 2 megabytes was the average size of the backtrace matrix
$ 388 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 11:46:50
-->
