<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 11:46:00"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U319013" ref_strand="+" ref_description="SGN-U319013        Tomato 200607 #1 [15 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr5:18501734-18503505 REVERSE | Aliases: K2N11.6, K2N11_6(evalue: 7e-36, score=148) genbank/nr: gi|18422571|ref|NP_568647.1| expressed protein [Arabidopsis thaliana] gi|21593524|gb|AAM65491.1| unknown [Arabidopsis thaliana] gi|26450411|dbj|BAC42320.1| unknown protein [Arabidopsis thaliana] gi|28827502|gb|AAO50595.1| unknown protein [Arabidopsis thaliana](evalue: 5e-34, score=148)">
      <seq>ggcgattggcggcaaatcggccgaattgaatgatggtgtgtcgtctctcctgttggctcttacaatcgaaagcaaaaaaacctaagtcccaaatagagagcaaagatgcagagatggtgctctaagctccggtccctcgccgctctccgttcaactccaaatgcccatcactaccctcttactcctcatcgtcttctccacactgctaccaatcccattattaacaaacccttcacacagtcaatactctctcccacctttaaacccctttgccatggtggccctgtttcgttccccactcactcgtctctcctccctctttctttcatgcaagtgcggtacatcactgcaaaacagaggaaaaggaagttgaaaagcaggaagcccatgactccaatcacatcaaaagtcaagaaaatcaaaatgaaattttattcgtcttacaaggacagatttcgtgtgatgaaggatggccagattaggcgctggaaggaggggaagagacataatgcacatttaaagtctaagaaatcaaaacgtcggctcaggcaacctgctacggtccctttggcttatgcaaaagtgatgaagaagctcagtttctgttgaagcatttttagtttgatgctcttactgccactctcacttgagtggcgtttcttctggtcttgttggttatcctctcgaatcagtgcagtgtagaagatttttttcaaggcaaacatataacatgttctgttcaggtcttttgtgacaaagctgctgttagtctatttctttggcaaatgggtatggagtttgatagttcttgtaagaacaaataaaaatacaagagatgatctaaggagaaaggtgcaaggacaaaaaaatttgtatcaggtatccaagtgaagaaacagtcaagttctttcttatgaattaacttatctttatcaagtcatatgatcttaatttgaaccaatcattttacttctttttagtgatttgtcaggaaatgagatgaataaactagtttgattatgtgattctttttctttcatatttttaagtatttgatggctcattgaaatgcgattctaagaaacatatgggcacaaaatanaaaagaatttgatggctcattgaaatgccattctaaaaaaacatatgggcacaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0042L06.1" temp_strand="+" temp_description="C06HBa0042L06.1  AC232856.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0042L06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="32261" stop="39257"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32564" g_stop="32859" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="324" r_length="296" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32860" i_stop="33249" i_length="390">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33250" g_stop="33362" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="437" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="33363" i_stop="33441" i_length="79">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33442" g_stop="33526" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="522" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="33527" i_stop="38382" i_length="4856">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="38383" g_stop="38957" g_length="575"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="1097" r_length="575" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1153" polyA_stop="1168"/>
      <MATCH_line gen_id="C06HBa0042L06.1" gen_strand="+" ref_id="SGN-U319013" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1069</cumulative_length_of_scored_exons>
        <coverage percentage="0.915" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0042L06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U319013" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32564" e_stop="32859"/>
          <exon e_start="33250" e_stop="33362"/>
          <exon e_start="33442" e_stop="33526"/>
          <exon e_start="38383" e_stop="38957"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGATGGTGTGTCGTCTCTCCTGTTGGCTCTTACAATCGAAAGCAAAAAAACCTAAGTCCCAAATAGAGAGCAAAGATGCAGAGATGGTGCTCTAAGCTCCGGTCCCTCGCCGCTCTCCGTTCAACTCCAAATGCCCATCACTACCCTCTTACTCCTCATCGTCTTCTCCACACTGCTACCAATCCCATTATTAACAAACCCTTCACACAGTCAATACTCTCTCCCACCTTTAAACCCCTTTGCCATGGTGGCCCTGTTTCGTTCCCCACTCACTCGTCTCTCCTCCCTCTTTCTGTAAGTTGCCTTCTTTATTCATTTTCATCTTATTGGAGTGTGTATTTATATTAAGTTCATAGGAGTAGTGGGTGCAATGGACCTCCAAACCCCAATTACTTGAAATCTTGGATTTGCCTATGCATATAATGCTTAAAATAGTATAATGTTCTAGTCTGATTGTTATTAATTACGGTCTAAGTGCTGGAAATGGAAGGAAAGACAAAGGGGTTAACCAAAATGTGACCTTGATTTCATATGATTGGTCTTGGGTAGTGTTGAAAATATTGTAGCTTCTCATGTATGTTTAGTGTATCTTTCTGTTATTTACTTGTTCAGTAATGATTTCTATTCTGTGTTTATTGGGATTTTCTTCTATTTACTTGTTTAGTGTTGATTGTTGATTTCTAGTTCATGCAAGTGCGGTACATCACTGCAAAACAGAGGAAAAGGAAGTTGAAAAGCAGGAAGCCCATGACTCCAATCACATCAAAAGTCAAGAAAATCAAAATGAAATTTTATTCGTATGTATATGACTTAATTTGATTTGTCTTTAAGTTCGTGTTAGATATTGAAGATAATTAGTACTTGCTACTGGATTAGGTCTTACAAGGACAGATTTCGTGTGATGAAGGATGGCCAGATTAGGCGCTGGAAGGAGGGGAAGAGACATAATGCACATTTAAAGGTTAGCTTTTCTCTTGTTCTTTTGGCAGCTTTGATTAATTAAGCGAAATACGGTATACATGGACACTCAATTGTTGTTAATATTACCTTAATGCTTGTGAGGTGGTATTTTAGGGTATAATTTCAATCACTTATGTGTTTGACTTGGTACTTGTCTTATTGTTGTTACCAGAAAACTGCTTGACTAAACTGCTTGACAGTTCGACTAATAAGGATCAATAACTGATCCCCCTTGTAACTGTTTACCAGAACTCTTCCAGGGTTTTAGGGGAGGGGTGTTGTGAAAAGAAGAATGTTTCTCTGTGAAAGCACTCATCTTTCTTCCCACCATGTAGTTAATGTTTAGCAAGGAGTTGGAATGTTCCTAGCTGTTATTGTTATTGTTACAGTCAAATTCTGTACTGTATGCTTTGCTTAACAACTCCCAAAATGCATTTCTGTTAAAGTCCAGCTATGTAGGAGTTTAAAGTTTGTAAGTTTATTGATTGTTCTAGTGGGAGGTAGTAGGTACCCTGTTGAATTGGTCGAGGTGTGCACAAGCTGGCCTAAAAACAATGGTTTATAAAAGAAATGCTTGTAAACTTCTTGAAATTGTAGGGTTAATTTTGCTCAATTCAGTGAAATGATTTAGATCCAGGACTTATTTAGGGTCCAAAGATGTGATGAACTTAAAGCTTACTGCAAATTTTGCAAGGTTTATGTCTTTAGTTGATAATTTGTGATTCCTATGTAGGAGAAAGAAATTAGGGAGTACAGAAGTTTGGTGAGATCTTCAGTTTGGGGCTTCCAAATGTTGGAGCCTAAACAGATTAGGAAATGTTGTAAGGAGAATTCTGGGAAGTGAATCTAGATATGAATCAAGAATGAGAAAGGTTGAGGTGGAACAAAAAGGCAACTCGAGGTGCTTGAGAAGGACAAAAAAGATGTTGTCAATTGTCATTGAGAAGCTACTACCTAATTGTGGTTGACTAACAAACCATTTGAAAGGAAGTGAAAACAACTAGGAACCAAATAATAAAATGTAGCCTAGAATAAGTAAAAATAAAATCTGAACTAAGAATCCAAGCCTTACAGAAGAGTGCTATAGGACCACAACTATAATGCTGCCACAGTGGTGAATAATGATTCTGCCGCACTTCTTGTCTTCCCATCTATTCTTCCATCAGCATTCAGCTCTTCTTAGGTTGGAAAAAAGAAGCTGGTGCTCAAGTCTTCACTTTCCATGCTGAGTAGGAATTAGGGCTTGTCCTTGTAATCTGTCCATCCTTTCTTCCTTTTACTTTAGTTGGCTAGCTGAAACAACTTTATATTAGTCTTTCCAAAGTTGCATCTGATACAGTTCCTATGGTAATCATAACTTTTAAGAACATTTTCTCCCCTTCCTCTGGTAAATGATAATATGATTTGATAATATGATTAAAAGTTATCATGCGTGCAAGGTCCTTCATGTCTTCACCTTTATTTGATTATTCCAGCCGAATATGACTTGATGTCCATAAAGCATCCCCAATTAAAATTGTATTTGCGTGCTTCATTGATGACATATTTTTCTTCTTAAAGATTAACTCCGACCGCATAATTGAACCTTAGACAAACTCATACTCATTATTGAGAAGCAGTTTTTTTTCCTGCCACAACTCGTATATTTTAGTAAAAAGGGGCCGGACCACAAGTATTTCCATTGTATTCTCCAGACCTGTATATTATTTGTCTGTTTGACTTGTAGAACTTTTATAAGAGTTTGAGAGCACTGGTAGTGTCTGAAAAGTTTAGTACAATCTTTTAAGAATAGGAAGTAGATCATCTTTATGGGGGATAAATATATTTAACTGGAGGATTATTCTGATATCCTGATCTAATCCTGATGTATCAGAATCAAATTCTTGAAATAGCTCATTTGATCTTCATCACAACTTCGTAGTGCTTGAAATTATTAAGATAACTATCTTTATTTTCACCATTAATTTCTTCCTCCATTATATGTGTTCATTAGGATGCTTGGTTTGTCCATCAAGTTTTGTATTGATTTCTTCAACTCCTGTTTTCCGACATGTTTGTGTAGGCCGTCTTTAGTTATGATTCCAAGTAATACATACGGGATTGTGGAAGTAGGAGTTTTACTTTGATTTATGTGAAAGCCCTCATTTCCTAAAGGCAAATAAGGGGAAATGCTTAAAAGGGTTGTTTTTAGCAAAGAATTCAACTGATTAGGAATAGAGGCTTAGTTGATTGAATAAAAAAAGTTCTGGGATACATCATCAGGACCAGAGGCAAAATATCACAGATTTTTTTCTTGATGAGTGAAATTTTATTGATTGCCCCATAAAGTGCTTCTGCATGTACATTAAAAGACTTTTCATCCCCTTAATAAAGAAGGGTTTCAAGAATCTGTCTGTTACCTTGTCAAAAAGAAAAGGGGTTCAAGAAAATTGATAAAATATCACAGATAATAAGTTGAGCAATTACAAAGCTATAATAGCTCCTTCTTTTCTTTTCTTTTTTAAATTTTAAAAGACAGCCTTTTTCCTGAAAAAAAAACTGTATTTCCAAATTCTCAAGCTTATTTAGACGAAAGATTGAGGAAGATAGGAAGTAGGAAACAGATAGTAAAAGTTACTTAAATAATCGAACCGAATTACTTACCAAAAATAAATTCAGCCCAATTAATAAACTGTCCTCTGATCTTAAAGGCACTGTCGTTGTAAAAAGTTATCTGATCTATCAACCCAAAGAAAAAAAAACCTCTGATAGATGCTGCAAAACATACGCCATGTGCTGCTATATACCAACTTAAAAAGTGCCTGGTAAATATGATTCTGTTGCAGTACTAGTTTTGATGCATCTGTCTGTGCATCATTTATCCTCTATATTCTTCACTAGAACACTTCTGTATCCCTTTATTTTTTAGGAGACTTGAACGAATAGGCATTTTAGAAATTATTAAAAATCTTCTTCATCGTGTTTTCTTCCTTTTTTTGGTTCTTTAAGATCTGTTTTCACTTCTTACTGTTTCATTTTCTTCTTTGTCGAGCCCTAAGCAAATCTTTAACATCACTATTCCTGTAGCCCTTTCAGCTACATTGCACCCATTCATCATTAGCTCCATGTGTTCAAATTGTGCACCAAAATACAAATTTTTAAGTTTTGGATATACTTGAATAGAACAGAACGGCGAAATAAAATACATATATCTGATTCAACTAATTTGAGTTTGAGGCCTGATTGATTTATTGGTTGTCATTTGTTTCTTACCTATCATCTGTCATCACTTTTTCCCTATAAGATATTGGATTGCATATAAATATGCAAAGACCAATTTCTTGTGAGGAAAGGGATTCTCTGTATACAAGCATTATACGAAAAAGTAGGGAATCTACTTCATAGTTAATTGATAGGTGAGTTTCACAAAGTATATCCGTCCCAAGCCCTGGATAAAGGATAAGAAATGTGGAGGTTGATTGTTGATGTTGACCACCAGTGTAAAGCTGTCTACCTATGATATATTCTCTGATATTAGCATTTGTAATAAACTGAATCTGAATAGAGAGGGCATGGATAAATAAGATTTAAAAAGCATAGAATAGTTAATTTTGGATTGAGAGACAGTTCATTGGTTGTTTTCTAATGGACTCATGTAGCTTGATATGGTGTACACATGTAGTTTTATATGGTAGAAGTCTGCTAGCCTTTATGTGTTATGAAGTTGTGCATTTTGCCTTCAGCGAGTAAGGGCAACATTTGAAACCATTTTTTGGGGTGGGTTGGAGAAAGGTAGGGGGGCAGAATCTTCCTGACGTGGAAAGTGGAAACTTGTGTATTTGGCAAAACATCTCTTTTTTTTGTCGTTGATAATCTTTATGTCCGGGCCAACTTGCATTCACCTAGATTAATTCCACGTGATACCTGATACCTATCACCAACATCGATATCAGGAAACCTTGTCCACCAATGCTTGGACCTACGGAAAAATTTCCCAGTGCTTTTGTGTTTTTGCCTCCACAAGAACCGGAGACCTCATGATTCTCAGTCCTCTTCATTGAGCACTAGACTGTTATGCTACTCTCTTGGGTACGGCAAAACACCATTTTTTTAAAAAAAAGTGCAGTAACGTAATTCCTGCCTGCCCTCCAGGCTAGTTATTTATTTGATAAAATTGCTTGGACCATAGTAAAATAGTTAGTAACAATATTGTGCATCACAGCTAAATGCAACTCTGTGTGCAGTAATAACAACATTTGATACTAGAAACTTAATCTTGCGATTTCTTAGGCTGAACTAGTCTAACTGCGATTTTCTTATGTTTAACTATGTGGTAATTCTGCTTGTTCAGAGGAATAGGAAGTTCAAAATTTCCTTAGCAAGGTGAAGTCTGTTGTGAGATCGCAACTTCTAAATCACTTTCTTTTATGCCTTCATTGAGTGGATTTGGAAGCTATAGCTTTTGAGATCACTTGATTTTTGAAGGCAAATCTTTGATTTTCCGGGACTTTTGGCCTTCTAAAATTAGTTCCAGCCTAACAACTTTTTGAAGGTGGCCAGCATAGCCCTTAATGCTGAGGAATACAAAATGTTTCCAGTCTTAAGTTAAAAAAAGAGTTCCAGGACTCATGGACTTGATAAGTTTGATCATCTGGTAGATTCTTGGTTGTAGAAATATAGAAAGGTCAAAATTTTCTGGAGTAAACTGCCATGTTTTCTGTTCATATAAATAAAATGACACACTTACCATTAAAATAGATTCTTGAGCATCTTCAGTTGAATTATCTGCATGTTGTTGTGTTTGTACACTTGCACTAGTTATGAACTTGAGTCATGACTTCTTCAATGGTGCTAAATGAGTTTTATTGTTTGGTGCAGTCTAAGAAATCAAAACGTCGGCTCAGGCAACCTGCTACGGTCCCTTTGGCTTATGCAAAAGTGATGAAGAAGCTCAGTTTCTGTTGAAGCATTTTTAGTTTGATGCTCTTACTGCCACTCTCACTTGAGTGGCGTTTCTTCTGGTCTTGTTGGTTATCCTCTCGAATCAGTGCAGTGTAGAAGATTTTTTTCAAGGCAAACATATAACATGTTCTGTTCAGGTCTTTTGTGACAAAGCTGCTGTTAGTCTATTTCTTTGGCAAATGGGTATGGAGTTTGATAGTTCTTGTAAGAACAAATAAAAATACAAGAGATGATCTAAGGAGAAAGGTGCAAGGACAAAAAAATTTGTATCAGGTATCCAAGTGAAGAAACAGTCAAGTTCTTTCTTATGAATTAACTTATCTTTATCAAGTCATATGATCTTAATTTGAACCAATCATTTTACTTCTTTTTAGTGATTTGTCAGGAAATGAGATGAATAAACTAGTTTGATTATGTGATTTTTTTTCTTTCATATTTTTAAGTATTTGATGGCTCATTGAAATGCGATTCTAAGAAACATATGGGCACAA</genome_strand>
        <mrna_strand>AATGATGGTGTGTCGTCTCTCCTGTTGGCTCTTACAATCGAAAGCAAAAAAACCTAAGTCCCAAATAGAGAGCAAAGATGCAGAGATGGTGCTCTAAGCTCCGGTCCCTCGCCGCTCTCCGTTCAACTCCAAATGCCCATCACTACCCTCTTACTCCTCATCGTCTTCTCCACACTGCTACCAATCCCATTATTAACAAACCCTTCACACAGTCAATACTCTCTCCCACCTTTAAACCCCTTTGCCATGGTGGCCCTGTTTCGTTCCCCACTCACTCGTCTCTCCTCCCTCTTTCT......................................................................................................................................................................................................................................................................................................................................................................................................TTCATGCAAGTGCGGTACATCACTGCAAAACAGAGGAAAAGGAAGTTGAAAAGCAGGAAGCCCATGACTCCAATCACATCAAAAGTCAAGAAAATCAAAATGAAATTTTATTC...............................................................................GTCTTACAAGGACAGATTTCGTGTGATGAAGGATGGCCAGATTAGGCGCTGGAAGGAGGGGAAGAGACATAATGCACATTTAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAAGAAATCAAAACGTCGGCTCAGGCAACCTGCTACGGTCCCTTTGGCTTATGCAAAAGTGATGAAGAAGCTCAGTTTCTGTTGAAGCATTTTTAGTTTGATGCTCTTACTGCCACTCTCACTTGAGTGGCGTTTCTTCTGGTCTTGTTGGTTATCCTCTCGAATCAGTGCAGTGTAGAAGATTTTTTTCAAGGCAAACATATAACATGTTCTGTTCAGGTCTTTTGTGACAAAGCTGCTGTTAGTCTATTTCTTTGGCAAATGGGTATGGAGTTTGATAGTTCTTGTAAGAACAAATAAAAATACAAGAGATGATCTAAGGAGAAAGGTGCAAGGACAAAAAAATTTGTATCAGGTATCCAAGTGAAGAAACAGTCAAGTTCTTTCTTATGAATTAACTTATCTTTATCAAGTCATATGATCTTAATTTGAACCAATCATTTTACTTCTTTTTAGTGATTTGTCAGGAAATGAGATGAATAAACTAGTTTGATTATGTGATTCTTTTTCTTTCATATTTTTAAGTATTTGATGGCTCATTGAAATGCGATTCTAAGAAACATATGGGCACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U329897" ref_strand="+" ref_description="SGN-U329897        Tomato 200607 #1 [2 ESTs aligned]">
      <seq>aacggtgaatcaggttcttggatgtgactacagacgacttgtacaattatgagggattgcgacaaagaagaaaaaatgcaaaaataaagaaggaaaaaaaatatggaaattaaagaaataaagaaggaaagaaataaagaagttaaattcaagtcaaataaggaaagaaaaaaaaggttacaattcaagtcaaataaggaaagaaataaatatagacaatttcaagaaggaaaatgatttgtaattcctttagttccttgtagaagttgatgaaggccaatcaaactctataaaaggtttaagaagttgaagaaaaaaatgtctttgcaataacataaatcgagagaatttttccagtaaaacaagaacgatagctattgcaattcacgaaatatatcttcgtgaaagcaatagttactggagaaaagttgcagagcttcgtcacagcttggtcacaacaacgtaaggaccaagatcacgagttatgttccactctgaactattgaatattgaagtctgatcaattaaattatagggttattagtctctgttgatttgttctagatttattattgagttgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0042L06.1" temp_strand="+" temp_description="C06HBa0042L06.1  AC232856.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0042L06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="62425" stop="63604"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62726" g_stop="63304" g_length="579"/>
          <reference_exon_boundary r_type="cDNA" r_start="5" r_stop="583" r_length="579" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0042L06.1" gen_strand="+" ref_id="SGN-U329897" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0042L06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U329897" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62726" e_stop="63304"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAATCAGGTTCTTGGATGTGACTACAGACGACTTGTACAATTATGAGGGATTGCGACAAAGAAGAAAAAATGCAAAAATAAAGAAGGAAAAAAAATATGGAAATTAAAGAAATAAAGAAGGAAAGAAATAAAGAAGTTAAATTCAAGTCAAATAAGGAAAGAAAAAAAAGGTTACAATTCAAGTCAAATAAGGAAAGAAATAAATATAGACAATTTCAAGAAGGAAAATGATTTGTAATTCCTTTAGTTCCTTGTAGAAGTTGATGAAGGCCAATCAAACTCTATAAAAGGTTTAAGAAGTTGAAGAAAAAAATGTCTTTGCAATAACATAAATCGAGAGAATTTTTCCAGTAAAACAAGAACGATAGCTATTGCAATTCACGAAATATATCTTCGTGAAAGCAATAGTTACTGGAGAAAAGTTGCAGAGCTTCGTCACAGCTTGGTCACAACAACGTAAGGACCAAGATCACGAGTTATGTTCCACTCTGAACTATTGAATATTGAAGTCTGATCAATTAAATTATAGGGTTATTAGTCTCTGTTGATTTGTTCTAGATTTATTATTGAGTTGAAA</genome_strand>
        <mrna_strand>GTGAATCAGGTTCTTGGATGTGACTACAGACGACTTGTACAATTATGAGGGATTGCGACAAAGAAGAAAAAATGCAAAAATAAAGAAGGAAAAAAAATATGGAAATTAAAGAAATAAAGAAGGAAAGAAATAAAGAAGTTAAATTCAAGTCAAATAAGGAAAGAAAAAAAAGGTTACAATTCAAGTCAAATAAGGAAAGAAATAAATATAGACAATTTCAAGAAGGAAAATGATTTGTAATTCCTTTAGTTCCTTGTAGAAGTTGATGAAGGCCAATCAAACTCTATAAAAGGTTTAAGAAGTTGAAGAAAAAAATGTCTTTGCAATAACATAAATCGAGAGAATTTTTCCAGTAAAACAAGAACGATAGCTATTGCAATTCACGAAATATATCTTCGTGAAAGCAATAGTTACTGGAGAAAAGTTGCAGAGCTTCGTCACAGCTTGGTCACAACAACGTAAGGACCAAGATCACGAGTTATGTTCCACTCTGAACTATTGAATATTGAAGTCTGATCAATTAAATTATAGGGTTATTAGTCTCTGTTGATTTGTTCTAGATTTATTATTGAGTTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U340182" ref_strand="+" ref_description="SGN-U340182        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT3G48290.1 | Symbol: None | cytochrome P450, putative, very strong similarity to Cytochrome P450 71A24 (SP:Q9STK9)(Arabidopsis thaliana); | chr3:17893541-17895253 FORWARD | Aliases: None (evalue: 9e-37, score=150) genbank/nr: gi|6739506|gb|AAF27282.1| cytochrome P450 [Capsicum annuum](evalue: 8e-53, score=197)">
      <seq>tttccttcattcttgctgctcatcaaattaaatcaatggagatgaatttagtttcaggtctcctcttattctcattcctttttattctttttcgaaaatggagaagaagccaacaacacaatttgcctccaggtccatggagactcccactcattgggagtttgcatcacttaattagtggacataatccacatcgtatttttagagatctagctcgaaaatacggccctgtaatgtacttggaactcggggaagttcctaccgtgatcatatcatcaccttctacgtccaaacaagttttaaaaactcatgatctcgcctttgctagtaggccacaatttacatccactgatattgtcatgtacaataataaagatattgcatttgcagaatatggtgactactggaaacaaatgcgcaaaatttgtataatggaacttctaagtgccaagatggtcaagtcatttagctcaattcgaaaggatgaactctcgagtgttctctcatcaattgattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0042L06.1" temp_strand="-" temp_description="C06HBa0042L06.1  AC232856.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0042L06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="73532" stop="72415"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73232" g_stop="72715" g_length="518"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="518" r_length="518" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0042L06.1" gen_strand="-" ref_id="SGN-U340182" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>518</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0042L06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U340182" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73232" e_stop="72715"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCATCATTCTTGTAGCTCATCAAATTAAATCAATGGATATGAATTTAGTTTCATTTATCCTCTTGTTCTCATTCCTTTTTATTATTTTTCGAAAATTGAGAAGAAGCCAAAAACAAAACTTGCCTCCAGGTCCATGGAGACTCCCACTCATTGGGAGTTTGCATCATTTAATTAGTGGACATAATCCACATCGTATTTTTAGAGACCTAGCTCGAAAATACGGCCCCGTAATGTACTTAGAACTCGGAGAAGTTCCTACCGTCATCATATCATCTCCTTCTACGTCCAAACAAGTTTTAAAAACTCATGATCTCGCCTTTGCTAGTAGGCCACAATTTACATCCACTGATATTGTCATGTACAATAATAAAGATATTGCGTTTGCAGAATATGGTGACTACTGGAAACAAATGCGTAAGATTTGCATAATGGAACTTTTAAGTGCCAAGATGGTCAAGTCATTTAGCTCAATTCGTAAGGATGAGCTCTCTAGTGTTCTCTCGTCAATTGATTCT</genome_strand>
        <mrna_strand>TTTCCTTCATTCTTGCTGCTCATCAAATTAAATCAATGGAGATGAATTTAGTTTCAGGTCTCCTCTTATTCTCATTCCTTTTTATTCTTTTTCGAAAATGGAGAAGAAGCCAACAACACAATTTGCCTCCAGGTCCATGGAGACTCCCACTCATTGGGAGTTTGCATCACTTAATTAGTGGACATAATCCACATCGTATTTTTAGAGATCTAGCTCGAAAATACGGCCCTGTAATGTACTTGGAACTCGGGGAAGTTCCTACCGTGATCATATCATCACCTTCTACGTCCAAACAAGTTTTAAAAACTCATGATCTCGCCTTTGCTAGTAGGCCACAATTTACATCCACTGATATTGTCATGTACAATAATAAAGATATTGCATTTGCAGAATATGGTGACTACTGGAAACAAATGCGCAAAATTTGTATAATGGAACTTCTAAGTGCCAAGATGGTCAAGTCATTTAGCTCAATTCGAAAGGATGAACTCTCGAGTGTTCTCTCATCAATTGATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U331909" ref_strand="+" ref_description="SGN-U331909        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: AT3G26200.1 | Symbol: None | cytochrome P450 71B22, putative (CYP71B22), Identical to cytochrome P450 71B22 (SP:Q9LTM1)(Arabidopsis thaliana);contains Pfam profile: PF00067 cytochrome P450 | chr3:9590519-9592416 FORWARD | Aliases: MTC11.11 (evalue: 4e-36, score=147) genbank/nr: putative(evalue: 8e-50, score=199)">
      <seq>gtcactgagtttgtatatcgaagaattagttctgttaagttgacaagacgagtaccattagtggatcggattgatgagaggagtctcataatctcatctttccgaattgaactaaatgacttgaccgttttggtacttaataactccgtgacacaaatattacgcatttgtctccatttatcaccgtatggtgcaaatgcaatgtccttataattataagtagtgatgtctatggatgtaagttgtggcttagtggcaaaggcgagttcatgagtttttagtatttctttcaccatattaggggatgatacgatcacagcaggaatttctccgagttgtaagtacataatcggaccatattttgttgctaaattctgtagggtacgatgtggaaataatagagcacctctcaagtgatgaagactaccaataatgggaagtctccatggacctggaggcaatttttcttttgccgttgatgattttctaagtaatttgacaaatagagtaaacaaaaagggaaagaatataagtagtagtgcaacaaagctgtaagtagaggaataaatgacctccatattttttactaaaataagaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0042L06.1" temp_strand="+" temp_description="C06HBa0042L06.1  AC232856.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0042L06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="91116" stop="92306"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91416" g_stop="92006" g_length="591"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="600" r_length="600" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0042L06.1" gen_strand="+" ref_id="SGN-U331909" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0042L06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U331909" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91416" e_stop="92006"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCACTGAGTTTGTATATCGAAGAATTAGTTCTGTTAAGTTGACAAGACGAGTACCATTAGTGGATCGGATTGATGAGAGGAGTCTCGTAATCTCATCTTTCCGAATTGAACTAAATGACTTGACCGTTTTGGTACCTAATAACTCCGTGACACAAATATTACGCATTTGTCTCCATTTATCACCGTATGGTGCAAATGCAATGTCCTTGTAATTATAAGTAGTGATGTCTATGGATGTAAGTTGTGGCTTAGTGGCAAAGGCGAGTTCATGAGTTTTTAGTATTTCTTTCACCATAATAGGGGATGATACGATCACAGCAGGAATTTCTCCGAGTTGTAAATACATAATCGGACCATATTTTGTTGCTAAATTTTTTAGGGTACGATGTGGAAATGATAGTGCACCTCTCAAGTGATGAAGACTACCAATAATGGGAAGTCTCCATGGACCTGGAGGCAATTTTTCTTTTGCCGTTGATGATTTTCTAAGTAA--T------T-GAGTAAACAAAAAGGGAAAGAATATAAGTAGTAGTGCAACAAGGTTGTAAGAAGAGGAATAAATGACCTCCATATTTTTTACTAAAATAAGAAAG</genome_strand>
        <mrna_strand>GTCACTGAGTTTGTATATCGAAGAATTAGTTCTGTTAAGTTGACAAGACGAGTACCATTAGTGGATCGGATTGATGAGAGGAGTCTCATAATCTCATCTTTCCGAATTGAACTAAATGACTTGACCGTTTTGGTACTTAATAACTCCGTGACACAAATATTACGCATTTGTCTCCATTTATCACCGTATGGTGCAAATGCAATGTCCTTATAATTATAAGTAGTGATGTCTATGGATGTAAGTTGTGGCTTAGTGGCAAAGGCGAGTTCATGAGTTTTTAGTATTTCTTTCACCATATTAGGGGATGATACGATCACAGCAGGAATTTCTCCGAGTTGTAAGTACATAATCGGACCATATTTTGTTGCTAAATTCTGTAGGGTACGATGTGGAAATAATAGAGCACCTCTCAAGTGATGAAGACTACCAATAATGGGAAGTCTCCATGGACCTGGAGGCAATTTTTCTTTTGCCGTTGATGATTTTCTAAGTAATTTGACAAATAGAGTAAACAAAAAGGGAAAGAATATAAGTAGTAGTGCAACAAAGCTGTAAGTAGAGGAATAAATGACCTCCATATTTTTTACTAAAATAAGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326761" ref_strand="+" ref_description="SGN-U326761        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: AT3G61040.2 | Symbol: None | cytochrome P450 family protein, similar to cytochrome P450 monooxygenase - Arabidopsis thaliana, EMBL:D78600 | chr3:22605384-22607100 REVERSE | Aliases: None (evalue: 3e-33, score=138) genbank/nr: gi|7406712|emb|CAB85635.1| putative ripening-related P-450 enzyme [Vitis vinifera](evalue: 1e-44, score=182)">
      <seq>caaaaatatggaactcccaatccttgttattatcttcatctcatttatcttgttcattatcaagccatatatcaattctaaacccaataaactaccaccaggtcctactggtctcccaataatcggctcactcttaaaactaggtacaaaacctaaccaatcactagccgagctagccaaaaaacatggccctctcatgactctacagctcggctcactcacaaccatagtagtctcctcagccaaagtagccaaagagattctccacaaacacgacgaaactttctcagcacgtattgtccctgtagccgtagctgctcagccgaaccctgaagccacgttagcatgggttaacggcgatcacatgtggaaaaaaaagagaaggtttctaagtacgcaaatgtttaataatcaacggcttgatttgcttcaagaactacgtcaccaaaaagcggaacaactagtgagccatataaggagccagtgtgagagtggctccgctgttgatattggacgggtcgcgttcgcgaccacgttgaatttaatatcgaacacgatattttcgatcgatatggtggaaacggaatttaaaacggctcatgagtttaaggaattggtttggacagttattgaagatgccggggtaccaaatctatctgatttttttccggttttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0042L06.1" temp_strand="+" temp_description="C06HBa0042L06.1  AC232856.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0042L06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="103486" stop="104762"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103786" g_stop="104462" g_length="677"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="677" r_length="677" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0042L06.1" gen_strand="+" ref_id="SGN-U326761" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>677</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0042L06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U326761" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103786" e_stop="104462"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAATATGGAACTCCCAATCCTTGTTATTATCTTCATCTCATTTATCTTGTTCATTATCAAGCCATATATCAATTCTAAACCCAATAAACTACCACCAGGTCCTACTGGTCTCCCAATAATCGGCTCACTCTTAAAACTAGGTACAAAACCTAACCAATCACTAGCCGAGCTAGCCAAAAAACATGGCCCTCTCATGACTCTACAGCTCGGCTCACTCACAACCATAGTAGTCTCCTCAGCCAAAGTAGCCAAAGAGATTCTCCACAAACACGACGAAACTTTCTCAGCACGTATTGTCCCTGTAGCCGTAGCTGCTCAGCCGAACCCTGAAGCCACGTTAGCATGGGTTAACGGCGATCACATGTGGAAAAAAAAGAGAAGGTTTCTAAGTACGCAAATGTTTAATAATCAACGGCTTGATTTGCTTCAAGAACTACGTCACCAAAAAGCGGAACAACTAGTGAGCCATATAAGGAGCCAGTGTGAGAGTGGCTCCGCTGTTGATATTGGACGGGTCGCGTTCGCGACCACGTTGAATTTAATATCGAACACGATATTTTCGATCGATATGGTGGATACGGAATTTAAAACGGCTCATGAGTTTAAGGAATTGGTTTGGACAGTTATGGAAGATGCCGGGGTACCAAATCTATCTGATTTTTTTCCGGTTTTAA</genome_strand>
        <mrna_strand>CAAAAATATGGAACTCCCAATCCTTGTTATTATCTTCATCTCATTTATCTTGTTCATTATCAAGCCATATATCAATTCTAAACCCAATAAACTACCACCAGGTCCTACTGGTCTCCCAATAATCGGCTCACTCTTAAAACTAGGTACAAAACCTAACCAATCACTAGCCGAGCTAGCCAAAAAACATGGCCCTCTCATGACTCTACAGCTCGGCTCACTCACAACCATAGTAGTCTCCTCAGCCAAAGTAGCCAAAGAGATTCTCCACAAACACGACGAAACTTTCTCAGCACGTATTGTCCCTGTAGCCGTAGCTGCTCAGCCGAACCCTGAAGCCACGTTAGCATGGGTTAACGGCGATCACATGTGGAAAAAAAAGAGAAGGTTTCTAAGTACGCAAATGTTTAATAATCAACGGCTTGATTTGCTTCAAGAACTACGTCACCAAAAAGCGGAACAACTAGTGAGCCATATAAGGAGCCAGTGTGAGAGTGGCTCCGCTGTTGATATTGGACGGGTCGCGTTCGCGACCACGTTGAATTTAATATCGAACACGATATTTTCGATCGATATGGTGGAAACGGAATTTAAAACGGCTCATGAGTTTAAGGAATTGGTTTGGACAGTTATTGAAGATGCCGGGGTACCAAATCTATCTGATTTTTTTCCGGTTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U344642" ref_strand="-" ref_description="SGN-U344642        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT2G45570.1 | Symbol: None | cytochrome P450 76C2, putative (CYP76C2) (YLS6), identical to SP:O64637 Cytochrome P450 76C2 (EC 1.14.-.-) {Arabidopsis thaliana}, cDNA YLS6 mRNA for cytochrome P450 (CYP76C2), partial cds GI:13122289 | chr2:18786867-18789032 REVERSE | Aliases: F17K2.10 (evalue: 3e-67, score=251) genbank/nr: gi|7406712|emb|CAB85635.1| putative ripening-related P-450 enzyme [Vitis vinifera](evalue: 5e-70, score=267)">
      <seq>aaaccctgaagaactcaacaaagttcgacaagaaataatggaccaaataggtctagaaagagcagttaaagaatcagacttggccaaactcccatatcttcaagcagttgtaaaagaaacgattagacttcaccccgcagttccattactattaccgcacaaagcacaaaatgacatacaagtgttgggcttcaacgtgcctatatacagtcaagttttcgtgaatgcatgggcaatcggaagagatcccaagtcgtgggaaagggcactagagtttttgcctcaaagattcatcgaatctaacgtggattataaaggtagggattttgagtttattccatttggcgcggggaggaggatttgtcctggaataccgctggctataagaatggtgaatttaatgttggcttctgttattcaaccatttaaatggaagttacctgatggaatggctccggaggaattgaacatggaggaacaatttggagtaagtttgaggaaggctgttcctcttgttgcagttcctagtatggaagaaaaataatcttcttttaatttattcctgatttaattttaatttgcaatgattcttctttaccttgttaatgtgattgtgcgaagtgtatttatgttaaaaaaaaaaaaaaaaaaaagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0042L06.1" temp_strand="+" temp_description="C06HBa0042L06.1  AC232856.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0042L06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="105421" stop="107970"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105720" g_stop="106349" g_length="630"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="630" r_length="630" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106350" i_stop="107651" i_length="1302">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107652" g_stop="107678" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="631" r_stop="657" r_length="27" r_score="0.889"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0042L06.1" gen_strand="+" ref_id="SGN-U344642" ref_strand="-">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>657</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0042L06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U344642" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="105720" e_stop="106349"/>
          <exon e_start="107652" e_stop="107678"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACCTGAAGAACTCAACAAAGTACGACAAGAAATAATGGAACAAATAGGTCTAGAAAGAGCAGTTAAAGAATCAGACATGGACAAACTCCCATATCTTCAAGCAGTTGTAAAAGAAACGATGAGACTTCACCCCGCAGTTCCATTACTATTACCGCACAAAGCACAAAATGACATACAAGTGTTGGGCTTCAACGTGCCTAAATACAGTCAAGTTTTCGTGAATGCATGGGCAATCGGAAGAGATCCCAAGTCGTGGGAAAGGGCACTAGAGTTTTTGCCTCAAAGATTCATCGAATCTAACGTGGATTATAAAGGTAGGGATTTTGAGTTTATTCCATTTGGCGCGGGGAGGAGGATTTGTCCTGGAATACCGCTGGCTATAAGAATGGTGAATTTAATGTTGGCTTCTGTTATTCAACCATTTAAATGGAAGTTACCTGATGGAATGGCTCCGGAGGAATTGAACATGGAGGAACAATTTGGAGTAAGTTTGAGGAAGGCTGTTCCTCTTGTTGCAGTTCCTAGTATGGAAGAAAAATAATCTTCTTTTAATTTATTCCTGATTTAATTTTAATTTGCAATTGTTCTTCTTTACCTTGTTAATGTGATTGTGCGAAGTGTATTTATGTAATGTTTGGCTTAATAATTTGTTTTTAAAAACTTTTGGAAACAAGAAACTTGAAATTAATGAGCAACTTTTGGACGTTGCCCTTGTCTACTTAATTGTTCTATCCAAAGAGAAAATTGATTTTTGCATCGGTAAACTTTGATTTTATGTTTAATTTTGAAGCCGCATTAAATAGTGGCGGACTCAGGATTTTCAATAAATGGGTTCAAAGTTCGTAGAAATAGACATACGGAGTAGCTGAAGAAGATTCCACATATACTATATATACATAAAATATTATTTTATAAATAATATAATTTTTCATCGAAAAAGGGTTCGGATGAAACCCCTTGTACCAAGGTGGCTCCGCCCCTGACAATAAATATGCATATTAACAAAAAGTGATATACTAACATTAATTAGTTAATTGTTATTGAATCCTCGCTAAAGTCAAAAGTGATATACTAGTATTAATTAATTAATTGCTTTCGGATCCTCGCTAAAGACTTTAGAAATATTTAAAGAAGTGTGTTTCTAAAGACTTCAGGAATATTAAAAAAAGTGTTATTGCCATTAAAAGAATTTACATATTAAATTACACTTAAATTATTATCGTTAATTAATTATCAATTATTTTATTATAGTGTGAACACACATGGTTTAATATTCGTATTATTATAAAGTTTTTAGAAAACAGAAATATACATAATAAAATAAGTAAGTAGAAAAGAGTTTACAAGACGACTAAGATGAGAATACCCCACTGGCCACTGTGAATACTATTCAAGGGACACTGAATGAGAATACAGGGACAGGGACTGGGACAGTGGCGAGAAATTTCATTTATTCATCATTTTAATAATTTAATTTATTTTAAAAATTCATAAAACAACATAATAAGGAAAAAAAGTCAAATTTTTTTAAAAATAATCACTAAAATGGGGCAAAAATAAAAAAAAACCGCTAAATATGACATGACAAAGTATGTTCAATTTAGCGCATGGGGAGGGGGGAAGGGGTGTTGCTCCATTTTTCCATTTACTTTTTATATGTTCAACCTCCTCCATAAAAATTCTAGCCCCTCACTGAATATAGGACACAATTTTTTTCAAATGTCAAACATAGTAATACTCGTTTTCAAAATTTTCTGGCTTGAAAACGATTTATACCTAATTACCTATAATTTTTAAATTTCAATTTTCTATATGAGATATTTAAGATCATAAGATTAAAAAATATTTTAATATTTTGCATATCCTTATTTAATTAAGACAATAAATTCATAAACCTTCTTTATTTACTTAAATTTCATTTCAAGTCAAATTAAAAAAAAAAAAGAAAAAAATAAA</genome_strand>
        <mrna_strand>AAACCCTGAAGAACTCAACAAAGTTCGACAAGAAATAATGGACCAAATAGGTCTAGAAAGAGCAGTTAAAGAATCAGACTTGGCCAAACTCCCATATCTTCAAGCAGTTGTAAAAGAAACGATTAGACTTCACCCCGCAGTTCCATTACTATTACCGCACAAAGCACAAAATGACATACAAGTGTTGGGCTTCAACGTGCCTATATACAGTCAAGTTTTCGTGAATGCATGGGCAATCGGAAGAGATCCCAAGTCGTGGGAAAGGGCACTAGAGTTTTTGCCTCAAAGATTCATCGAATCTAACGTGGATTATAAAGGTAGGGATTTTGAGTTTATTCCATTTGGCGCGGGGAGGAGGATTTGTCCTGGAATACCGCTGGCTATAAGAATGGTGAATTTAATGTTGGCTTCTGTTATTCAACCATTTAAATGGAAGTTACCTGATGGAATGGCTCCGGAGGAATTGAACATGGAGGAACAATTTGGAGTAAGTTTGAGGAAGGCTGTTCCTCTTGTTGCAGTTCCTAGTATGGAAGAAAAATAATCTTCTTTTAATTTATTCCTGATTTAATTTTAATTTGCAATGATTCTTCTTTACCTTGTTAATGTGATTGTGCGAAGTGTATTTAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAAAAAAAAAAAAAAAAAAGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U329088" ref_strand="-" ref_description="SGN-U329088        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: AT2G45570.1 | Symbol: None | cytochrome P450 76C2, putative (CYP76C2) (YLS6), identical to SP:O64637 Cytochrome P450 76C2 (EC 1.14.-.-) {Arabidopsis thaliana}, cDNA YLS6 mRNA for cytochrome P450 (CYP76C2), partial cds GI:13122289 | chr2:18786867-18789032 REVERSE | Aliases: F17K2.10 (evalue: 2e-71, score=265) genbank/nr: gi|7406712|emb|CAB85635.1| putative ripening-related P-450 enzyme [Vitis vinifera](evalue: 5e-74, score=280)">
      <seq>aaggccagcgtatttaaggttgcatgaaatatttgaagaaaatattgagaaaagagtaaaagggatgacgatgaagagagacggagattttttggatgtactacttgatcactgtaaagatgaaaatgatcgcaaaactataaagccgataatccttgatttattcattgctggaagtgacacatcggccctaacaatagaatgggcaatggcagaacttcttcgaaaacctgaagaactcaacaaagtaagacaagaaataatggaacaaatagggctagaaagggcagttaaagaatcagacatggacaaactcccataccttcaagcagttgtaaaagaaacgatgagacttcatccagcatctccattactcttacctcacaaagcccaacacgacgtacaagtgttgggatttaccgtgcccaaagacagtcaagttttagtgaatgcttgggccattggaagagatcccaagtattgggaaaggccgctagagtttctgcctggaagattcatggaatctagtgtggattataaaggtagagattttgagtttataccatttagcgcgggcaggagaatatgtccaggtatgccgctggctataagaatggtgaatttgatattggcttctattatacaaccatttagttggaagttacctgatggaatgacaccagaaaaattggacatggaggaacagtttggagttactttaaagaaggctattcctcttattgcaatacctagtatcactacatcaaaccattgattaatgacaataacttaatatcgctaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0042L06.1" temp_strand="-" temp_description="C06HBa0042L06.1  AC232856.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0042L06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="116654" stop="115174"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116354" g_stop="116198" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="157" r_length="157" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116197" i_stop="116131" i_length="67">
            <donor d_prob="0.915" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116130" g_stop="115473" g_length="658"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="814" r_length="657" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0042L06.1" gen_strand="-" ref_id="SGN-U329088" ref_strand="-">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>815</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0042L06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U329088" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="116354" e_stop="116198"/>
          <exon e_start="116130" e_stop="115473"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGCCAGCGTATTTAAGGTTGCATGAAATATTTGAAGAAAACATTGAGAAAAGAGTAAAAGGGATGACGATGAAGAGAGACGGAGATTTTTTGGATGTACTACTTGATCACTGTAAAGATGAAAATGATCGCAAAACTATAAAGCCGATAATCCTTGTAAGCGTTTTTCTTAGTTTAAATTTGAGTTATTCGGGTACGACTTATATTTGTAATCCGTTGACAGGATTTATTCATTGCTGGAAGTGACACATCGGCCATAACAATAGAATGGGCAATGGCAGAACTTCTTCGAAAACCTGAAGAACTCAACAAAGTAGGACAAGAAATAATGGAACAAATAGGGCTAGAAAGGGCAGTTAAAGAATCAGACATGGACAAACTCCCATACCTTCAAGCAGTTGTAAAAGAAACGATGAGACTTCATCCAGCAACTCCATTACTCTTACCTCACAAAGCCCAACACGACGTACAAGTGTTGGGATTTACCGTGCCCAAAGACAGTCAAGTTTTAGTGAATGCTTGGGCCATTGGAAGAGATCCCAAGTCATGGGAAAGGCCGCTAGAGTTTCTGCCTGGAAGATTCATGGAATCTAGTGTGGATTATAAAGGTAGAGATTTTGAGTTTATACCATTTGGCGCGGGCAGGAGAATATGTCCAGGTATGCCGCTGGCTATAAGAATGGTGAATTTGATATTGGCTTCTATTATACAACCATTTAATTGGAAGTTACCAGATGGAATGACACCAGAAAAATTGGACATGGAGGAACAGTTTGGAGTTACTTTAAAGAAGGCTATTCCTCTTATTGCAATACCTAGTATCACTACATCAAACCATTGAGTAATGACAACAACTTAATTATCGCTATATATATATATAT</genome_strand>
        <mrna_strand>AAGGCCAGCGTATTTAAGGTTGCATGAAATATTTGAAGAAAATATTGAGAAAAGAGTAAAAGGGATGACGATGAAGAGAGACGGAGATTTTTTGGATGTACTACTTGATCACTGTAAAGATGAAAATGATCGCAAAACTATAAAGCCGATAATCCTT...................................................................GATTTATTCATTGCTGGAAGTGACACATCGGCCCTAACAATAGAATGGGCAATGGCAGAACTTCTTCGAAAACCTGAAGAACTCAACAAAGTAAGACAAGAAATAATGGAACAAATAGGGCTAGAAAGGGCAGTTAAAGAATCAGACATGGACAAACTCCCATACCTTCAAGCAGTTGTAAAAGAAACGATGAGACTTCATCCAGCATCTCCATTACTCTTACCTCACAAAGCCCAACACGACGTACAAGTGTTGGGATTTACCGTGCCCAAAGACAGTCAAGTTTTAGTGAATGCTTGGGCCATTGGAAGAGATCCCAAGTATTGGGAAAGGCCGCTAGAGTTTCTGCCTGGAAGATTCATGGAATCTAGTGTGGATTATAAAGGTAGAGATTTTGAGTTTATACCATTTAGCGCGGGCAGGAGAATATGTCCAGGTATGCCGCTGGCTATAAGAATGGTGAATTTGATATTGGCTTCTATTATACAACCATTTAGTTGGAAGTTACCTGATGGAATGACACCAGAAAAATTGGACATGGAGGAACAGTTTGGAGTTACTTTAAAGAAGGCTATTCCTCTTATTGCAATACCTAGTATCACTACATCAAACCATTGATTAATGACAATAACTTAA-TATCGCTAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U324337" ref_strand="+" ref_description="SGN-U324337        Tomato 200607 #1 [6 ESTs aligned] arabidopsis/peptide: | Symbol: None | diphthamide synthesis DPH2 family protein, contains InterPro accession IPR002728: Diphthamide synthesis DPH2 protein | chr5:24935705-24938102 FORWARD | Aliases: MTG10.5, MTG10_5(evalue: 2e-33, score=139) genbank/nr: gi|15240408|ref|NP_201009.1| expressed protein [Arabidopsis thaliana] gi|20259528|gb|AAM13884.1| unknown protein [Arabidopsis thaliana] gi|21436215|gb|AAM51395.1| unknown protein [Arabidopsis thaliana](evalue: 2e-31, score=139)">
      <seq>cgaggattgcattgtttgaggatgcagtggatgcctggattcagattgcttgtccgaggttgtcaattgattggggagatgcatttaaaaagcctttgctaacaccatttgaggcggagattgcattgggtgatttgtctggatggtgggagaggacgacatcaaagaattcagatatatgtcgtgatgaagtaatgaagtgttcaaagaatgagtcttgtggtgcttgtgataagagtggtgaggaagtgaaggaagagacacaagtagattatccaatggattattatgctcaggatggtggggagtggaattcttgctactccaagaagcctgctagactttcacaaagaaatagccaatcttgtaatggtgccactgccatcaaatctaatagctgagctaacttgttccagctggacatattactgccatcgtaaatggagtttacacttctgcaggtggaatggaaaaagggtgatgctaaggctgtaaaagtatggagaaaccacctgctaccttttgatcacgggcgtaatttatttagcctagaaaaggattttcaaataaatctgggtattcaccgaggtgctattaaagggaaggctggaaagttcgcaaatgtaatgcatgtggtatcttgcttagattttcaaagttgatagctctttttgtcttagcgtcattgttaaaaacttttaaggtttgatgaaatatgattctgttaatttgtgtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0042L06.1" temp_strand="-" temp_description="C06HBa0042L06.1  AC232856.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0042L06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="122569" stop="120460"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="122269" g_stop="121810" g_length="460"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="460" r_length="460" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="121809" i_stop="121036" i_length="774">
            <donor d_prob="0.117" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121035" g_stop="120763" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="733" r_length="273" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="736" polyA_stop="745"/>
      <MATCH_line gen_id="C06HBa0042L06.1" gen_strand="-" ref_id="SGN-U324337" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>733</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0042L06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U324337" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="122269" e_stop="121810"/>
          <exon e_start="121035" e_stop="120763"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAGGATTGCATTGTTTGAGGATGCAGTGGATGCCTGGATTCAGATTGCTTGTCCGAGGTTGTCAATTGATTGGGGAGATGCATTTAAAAAGCCTTTGCTAACACCATTTGAGGCGGAGATTGCATTGGGTGATTTGTCTGGATGGTGGGAGAGGACGACATCAAAGAATTCAGATATATGTCGTGATGAAGTAATGAAGTGTTCAAAGAATGAGTCTTGTGGTGCTTGTGATAAGAGTGGTGAGGAAGTGAAGGAAGAGACACAAGTAGATTATCCAATGGATTATTATGCTCAGGATGGTGGGGAGTGGAATTCTTGCTACTCCAAGAAGCCTGCTAGACTTTCACAAAGAAATAGCCAATCTTGTAATGGTGCCACTGCCATCAAATCTAATAGCTGAGCTAACTTGTTCCAGCTGGACATATTACTGCCATCGTAAATGGAGTTTACACTTCTGCAGTGAGTACCTCCCTCGTATTTTCTGTTGAGGCCTTTTAGCTCAAGTCTCCATGCCCGTAAAATTTTTTATAAATATATTTATTTGTTTTACAGGACTTGTTTGGAATATTATCTTTAACACTTTAGTGGTGTTATTTTCCTATCCTTATGTGAGTTATATCTATGTATCTTGGTGTCAAAACTCTAATTATGCGAGACAATAACAAAGTTTTTTAAAAAAAGCATATATCGTGCTCCTTTGCGTCATGCAGTCTATCTATTGATCAACCCCAGGAGAGAGTTGCTATCTTGTATCTTGCTATTTCACTTCATGCATCCTTTTATCGACCAACTCCAACAATTTAGGTGCAAGCCCAGCTGTCCAAATTTATTCCTTAGTTCCAGCAGAAACAGTATATTTTTTTTTTAAAGAACAGTCTGCCACTTTGTTAAGATATTTAATAGGTAAAATACAGCGGGCTTTTGGGGAAGGCTTAGATCTAGTGAATCATTATGGTGACAAAGTAATCCGTCTTCGTGATAGACTCGTCCTAGAATGTGAGGGATCCGGTTGCATTATATATATATATATATATATATATATATATATATATTCTTTTTCTTTCATTTCTTTCTACATTCCTATTGTTGTAACTTCCTTGCATCACATAGGTCAAGAGATGCGAGATATAGAGATCTGCTGAGTGATGGTATATTATGTCTCTTAAAAGGTTGATGACATAAAAAACTGGGCTTCTCTGTTTCTTATAATCCATGTTATATGCTTGTTGTTAGGGTGGAATGGAAAAAGGGTGATGCTAAGGCTGTAAAAGTATGGAGAAACCACCTGCTACCTTTTGATCACGGGCGTAATTTATTTAGCCTAGAAAAGGATTTTCAAATAAATCTGGGTATTCACCGAGGTGCTATTAAAGGGAAGGCTGGAAAGTTCGCAAATGTAATGCATGTGGTATCTTGCTTAGATTTTCAAAGTTGATAGCTCTTTTTGTCTTAGCGTCATTGTTAAAAACTTTTAAGGTTTGATGAAATATGATTCTGTTAATTTGT</genome_strand>
        <mrna_strand>CGAGGATTGCATTGTTTGAGGATGCAGTGGATGCCTGGATTCAGATTGCTTGTCCGAGGTTGTCAATTGATTGGGGAGATGCATTTAAAAAGCCTTTGCTAACACCATTTGAGGCGGAGATTGCATTGGGTGATTTGTCTGGATGGTGGGAGAGGACGACATCAAAGAATTCAGATATATGTCGTGATGAAGTAATGAAGTGTTCAAAGAATGAGTCTTGTGGTGCTTGTGATAAGAGTGGTGAGGAAGTGAAGGAAGAGACACAAGTAGATTATCCAATGGATTATTATGCTCAGGATGGTGGGGAGTGGAATTCTTGCTACTCCAAGAAGCCTGCTAGACTTTCACAAAGAAATAGCCAATCTTGTAATGGTGCCACTGCCATCAAATCTAATAGCTGAGCTAACTTGTTCCAGCTGGACATATTACTGCCATCGTAAATGGAGTTTACACTTCTGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAATGGAAAAAGGGTGATGCTAAGGCTGTAAAAGTATGGAGAAACCACCTGCTACCTTTTGATCACGGGCGTAATTTATTTAGCCTAGAAAAGGATTTTCAAATAAATCTGGGTATTCACCGAGGTGCTATTAAAGGGAAGGCTGGAAAGTTCGCAAATGTAATGCATGTGGTATCTTGCTTAGATTTTCAAAGTTGATAGCTCTTTTTGTCTTAGCGTCATTGTTAAAAACTTTTAAGGTTTGATGAAATATGATTCTGTTAATTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U321613" ref_strand="+" ref_description="SGN-U321613        Tomato 200607 #1 [9 ESTs aligned] arabidopsis/peptide: | Symbol: None | diphthamide synthesis DPH2 family protein, contains InterPro accession IPR002728: Diphthamide synthesis DPH2 protein | chr5:24935705-24938102 FORWARD | Aliases: MTG10.5, MTG10_5(evalue: 1e-122, score=436) genbank/nr: gi|10176920|dbj|BAB10164.1| gb|AAF50025.1~gene_id:MTG10.5~similar to unknown protein [Arabidopsis thaliana](evalue: 1e-120, score=436)">
      <seq>aaactatggagaaagaacacggcggccttctcccactgaaccctactccggcggcggcggcgtcagcgacgaccgcagttgacgctggagatcagcagtcactgcagcagtcaacccggccgcgtccgaagaggttcgtgaagaaccaaataccagactccatcctaaacgatgcagcactcaacgccgccatatcacttttacctcaaaactacaacttcgaaatccacaagtgtgtatggcgagtgcgaacttcaagtgccaagcgtgtggccctgcagttccctgagggtctcctcatgtactcactcatcatctccgatatactctccacattcacttccgccactcactgtttcatcctcggcgacgtgactttcggcgcgtgttgcgttgacgacctctcggcgggagcgctttccgctgatctcctcattcatttcggccatagctgcctcgtgcctattgattccaccactatcccatgcctttatatattcgtcgaaatctcaatcgatgttcacaggttgttgaatgaactcaaactcaatttttataattccgatacgtatgacaatatcattatggctgggacaattcaatttgcttctgcaattcgggcggttaagcccgaacttgaaaaattggggtttagtattttgattcctcaagctaaaccgttatcagctggggaggtactcggctgtactgccccgagtgttaagaacagattttctgatggagagaatgtagttttgatatttgtggctgacggtaggtttcatttggaggcgtttatgatagcgaatccggggataaagacttacagatatgatccgtttatagggaagttgtttgtggaggagtatgatcataatggaatgaaggaggagaggaagagagcgattgaaaaagccaggggggcgaagaattgggggatagtgcttgggacattaggtacgcaagggaatccaaggatattggataggttagagaagaaaatgtccgaaaaggggattacttggacagatgtgttgatgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0042L06.1" temp_strand="-" temp_description="C06HBa0042L06.1  AC232856.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0042L06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="123625" stop="121984"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="123325" g_stop="122284" g_length="1042"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1042" r_length="1042" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0042L06.1" gen_strand="-" ref_id="SGN-U321613" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1042</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0042L06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U321613" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="123325" e_stop="122284"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTATGGAGAAAGAACACGGCGGCCTTCTCCCACTGAACCCTACTCCGGCGGCGGCGGCGTCAGCGACGACCGCAGTTGACGCTGGAGATCAGCAGTCACTGCAGCAGTCAACCCGGCCGCGTCCGAAGAGGTTCGTGAAGAACCAAATACCAGACTCCATCCTAAACGATGCAGCACTCAACGCCGCCATATCACTTTTACCTCAAAACTACAACTTCGAAATCCACAAGTGTGTATGGCGAGTGCGAACTTCAAGTGCCAAGCGTGTGGCCCTGCAGTTCCCTGAGGGTCTCCTCATGTACTCACTCATCATCTCCGATATACTCTCCACATTCACTTCCGCCACTCACTGTTTCATCCTCGGCGACGTGACTTTCGGCGCGTGTTGCGTTGACGACCTCTCGGCGGGAGCGCTTTCCGCTGATCTCCTCATTCATTTCGGCCATAGCTGCCTCGTGCCTATTGATTCCACCACTATCCCATGCCTTTATATATTCGTCGAAATCTCAATCGATGTTCACAGGTTGTTGAATGAACTCAAACTCAATTTTTATAATTCCGATACGTATGACAATATCATTATGGCTGGGACAATTCAATTTGCTTCTGCAATTCGGGCGGTTAAGCCCGAACTTGAAAAATTGGGGTTTAGTATTTTGATTCCTCAAGCTAAACCGTTATCAGCTGGGGAGGTACTCGGCTGTACTGCCCCGAGTGTTAAGAACAGATTTTCTGATGGAGAGAATGTAGTTTTGATATTTGTGGCTGACGGTAGGTTTCATTTGGAGGCGTTTATGATAGCGAATCCGGGGATAAAGACTTACAGATATGATCCGTTTATAGGGAAGTTGTTTGTGGAGGAGTATGATCATAAGGGAATGAAGGAGGAGAGGAAGAGAGCGATTGAAAAAGCCAGGGGGGCGAAGAATTGGGGGATAGTGCTTGGGACATTAGGTAGGCAAGGGAATCCAAGGATATTGGATAGGTTAGAGAAGAAAATGTCCGAAAAGGGGATGACTTGGACAGTTGTGTTGATGTC</genome_strand>
        <mrna_strand>AAACTATGGAGAAAGAACACGGCGGCCTTCTCCCACTGAACCCTACTCCGGCGGCGGCGGCGTCAGCGACGACCGCAGTTGACGCTGGAGATCAGCAGTCACTGCAGCAGTCAACCCGGCCGCGTCCGAAGAGGTTCGTGAAGAACCAAATACCAGACTCCATCCTAAACGATGCAGCACTCAACGCCGCCATATCACTTTTACCTCAAAACTACAACTTCGAAATCCACAAGTGTGTATGGCGAGTGCGAACTTCAAGTGCCAAGCGTGTGGCCCTGCAGTTCCCTGAGGGTCTCCTCATGTACTCACTCATCATCTCCGATATACTCTCCACATTCACTTCCGCCACTCACTGTTTCATCCTCGGCGACGTGACTTTCGGCGCGTGTTGCGTTGACGACCTCTCGGCGGGAGCGCTTTCCGCTGATCTCCTCATTCATTTCGGCCATAGCTGCCTCGTGCCTATTGATTCCACCACTATCCCATGCCTTTATATATTCGTCGAAATCTCAATCGATGTTCACAGGTTGTTGAATGAACTCAAACTCAATTTTTATAATTCCGATACGTATGACAATATCATTATGGCTGGGACAATTCAATTTGCTTCTGCAATTCGGGCGGTTAAGCCCGAACTTGAAAAATTGGGGTTTAGTATTTTGATTCCTCAAGCTAAACCGTTATCAGCTGGGGAGGTACTCGGCTGTACTGCCCCGAGTGTTAAGAACAGATTTTCTGATGGAGAGAATGTAGTTTTGATATTTGTGGCTGACGGTAGGTTTCATTTGGAGGCGTTTATGATAGCGAATCCGGGGATAAAGACTTACAGATATGATCCGTTTATAGGGAAGTTGTTTGTGGAGGAGTATGATCATAATGGAATGAAGGAGGAGAGGAAGAGAGCGATTGAAAAAGCCAGGGGGGCGAAGAATTGGGGGATAGTGCTTGGGACATTAGGTACGCAAGGGAATCCAAGGATATTGGATAGGTTAGAGAAGAAAATGTCCGAAAAGGGGATTACTTGGACAGATGTGTTGATGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U345322" ref_strand="+" ref_description="SGN-U345322        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | GHMP kinase family protein, contains TIGRFAM profile TIGR01219: phosphomevalonate kinase; contains Pfam PF00288: GHMP kinases putative ATP-binding protein domain; similar to Phosphomevalonate kinase (EC 2.7.4.2) (Swiss-Prot:P24521) (Saccharomyces cerevisiae) | chr1:11459030-11461805 FORWARD | Aliases: F5M6.9, F5M6_9(evalue: 3e-27, score=119) genbank/nr: gi|16417948|gb|AAL18926.1| phosphomevalonate kinase [Hevea brasiliensis](evalue: 1e-29, score=133)">
      <seq>cgctatgcttggaatcaggtattatatgcgcaaaatgggagaggctgcaggaattccgatagaacctgaatcacaaactcaccttctggatacaacgatgagtatggagggggttctgttggctggtgttcctggtgctggtggttttgatgcggtctttgctgtcactttgggggcttcaagcaaaaatgtgacaaaaacttggagttcactcaatgttcttgctatgctagttacggaagatccccgcggtgtatctttggaagagcatgatcctcgagcaaaggaaattactgcagctgtttcttcaatccaacttcaataatgatctgcatgtataggatattatatccaatggatatattatgacttcaacatcagattttacaacacaaaaaggatatattagagctctgaattgtaacgtcagaatcactttcatcaataagcacctaatgagagcctgttgtatttttacccaaaactttgatcttgttagaattagttccattttacttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0042L06.1" temp_strand="-" temp_description="C06HBa0042L06.1  AC232856.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0042L06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="124951" stop="123720"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="124652" g_stop="124595" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="124594" i_stop="124485" i_length="110">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="124484" g_stop="124014" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="529" r_length="471" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0042L06.1" gen_strand="-" ref_id="SGN-U345322" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0042L06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U345322" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="124652" e_stop="124595"/>
          <exon e_start="124484" e_stop="124014"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCGATGCTTGGAATCAGGTATTATATGCGCAAAATGGGAGAGGCTGCAGGAATTCCGGTAAGTTTGTCGCTACCATGTACTTAAAATCAAAAGCTCTTAAGAGTCAGCTGCATTGCTGTCTTCTCCCATTTTTTTAAACCATCCTTCACCATGTGTTAAATTCACAGATAGAACCTGAATCACAAACTCACCTTCTGGATACAACGATGAGTATGGAGGGGGTTCTGTTGGCTGGTGTTCCTGGTGCTGGTGGTTTTGATGCGGTCTTTGCTGTCACTTTGGGGGCTTCAAGCAAAAATGTGACAAAAACTTGGAGTTCACTCAATGTTCTTGCTATGCTAGTTACGGAAGATCCCCGCGGTGTATCTTTGGAAGAGCATGATCCTCGAGCAAAGGAAATTACTGCAGCTGTTTCTTCAATCCAACTTCAATAATGATCTGCATGTATAGGATATTATATCCAATGGATATATTATGACTTCAACATCAGATTTTACAACACAAAAAGGATATATTAGAGCTCTGAATTGTAACGTCAGAATCACTTTCATCAATAAGCACCTAATGAGAGCCTGTTGTATTTTTACCCAAAACTTTGATCTTGTTAGAATTAGTTCCATTTTACTTCAGAACTCTGT</genome_strand>
        <mrna_strand>CGCTATGCTTGGAATCAGGTATTATATGCGCAAAATGGGAGAGGCTGCAGGAATTCCG..............................................................................................................ATAGAACCTGAATCACAAACTCACCTTCTGGATACAACGATGAGTATGGAGGGGGTTCTGTTGGCTGGTGTTCCTGGTGCTGGTGGTTTTGATGCGGTCTTTGCTGTCACTTTGGGGGCTTCAAGCAAAAATGTGACAAAAACTTGGAGTTCACTCAATGTTCTTGCTATGCTAGTTACGGAAGATCCCCGCGGTGTATCTTTGGAAGAGCATGATCCTCGAGCAAAGGAAATTACTGCAGCTGTTTCTTCAATCCAACTTCAATAATGATCTGCATGTATAGGATATTATATCCAATGGATATATTATGACTTCAACATCAGATTTTACAACACAAAAAGGATATATTAGAGCTCTGAATTGTAACGTCAGAATCACTTTCATCAATAAGCACCTAATGAGAGCCTGTTGTATTTTTACCCAAAACTTTGATCTTGTTAGAATTAGTTCCATTTTACTTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U315731" ref_strand="+" ref_description="SGN-U315731        Tomato 200607 #1 [36 ESTs aligned] arabidopsis/peptide: | Symbol: None | similar to IWS1 C-terminus family protein [Arabidopsis thaliana] (TAIR:At4g19000.1); similar to P0416D03.25 [Oryza sativa (japonica cultivar-group)] (GB:XP_462790.1); contains InterPro domain IWS1, C-terminal (InterPro:IPR008654) | chr1:11558861-11561845 REVERSE | Aliases: F3C3.8, F3C3_8(evalue: 5e-126, score=449) genbank/nr: gi|55770293|ref|XP_550136.1| unknown protein [Oryza sativa (japonica cultivar-group)] >gi|54290395|dbj|BAD61265.1| unknown protein [Oryza sativa (japonica cultivar-group)] >gi|54290318|dbj|BAD61122.1| unknown protein [Oryza sativa (japonica cultivar-group)] (evalue: 7e-128, score=461)">
      <seq>acaagtgtaggtatatctggtgacaataaataaggcaatcacaaaatgaagttagaaatttgaccgcgttgattgctgccttcacaagtagagtaaacaaagtccgaaaacctccatcgtttcatagcctatagaatttgattgagctacccctacttcacaaatcatctatatatataatctacttttccagacatacccatctaactatctttttctctctgcgccgttgtagcgttcaagatgagttacaacaacgatccgtacatagatgaggatggagaggcattggtggattttgatgaggatgtccgatcagataacgagcaacaggaacaatttcttggtgacaatctggacgatgatgatgcatggaatcagagacagcgagagcggtcaccgaccccagtatatgatgatcttaacaagtctaagcccaggaagcggttaattaagaaatcttcagctagagaaaacacaccggatattgggctaggagatgaggaggatgcttatggtggtgctgctgctgatgacatgactggcaatatgcatgatgagtttgacggcggtggtccttcatcttcctctgctggtggtggaaagaggaagaggtttggcatggagtttagtgaagagaagaggaaggagaagaaggggagagagaaaggagagaagaaatttaagttgaggaaaaatgggggttactctggaggaagcaggttaaaggaccaggagggggatcgggagatgaaggagatgtgggacaccattgctggtggtgactctgaggatgaccaagaaggtccaaagaatgccgatgatgataacttcattgatgatagtggtgtagatccagctgacaggtatggaagcgacaatgaaccactgtctcccagcaatgctccacaggctgaagaaggggaagaggatgacgaaatcaagcagctcttcaagggaggcaagaagaaaaagaaaactgaaaagagtgcagcagaaattgcattgctagtagagaatgttatggctgagttggaagttgttgccgaggaggatgccgaactgaatagacattccaaacctgctataaataaactaaaaaaactccctcttctcatagatgtcctgtctaagaagcaacttcagcaagaatttttagatcatggagtgttgactcttttgaggacttggcttgaaccccttccagatggaagcctgcccaacataaacattcgtgctgcgatcctaaagatccttactgattatccaattgatcttgagcagtatgatagaagagagatgttgaaaaagagtggtcttggaaaggttattatgttcctctcgaaatcagatgaggagactacatctaacaggaaacttgccaaggatttggttgacaaatggagtcgaccaatattcaacaagagtacacggtttgaagacatgagaaatctagaggatgagagagctgctcaatacaggcggcccttgaaaaaacccatgaataaagcatcaggaatggaatccagagacgatgaccttgacttggctggatattcacaagggcaaaaatctggtcagtcatctggtaggcaacttacatcaaggcctgaagcaatgtcaatggattttgtggtgcgtccacagtctaagattgatcctgacgaagttagggccagggctagagcaatggttcaagaccagcgccgaatgaagatgaataagaaactgcagcagttaaaagctcccaaaaagaagaaactccaagccacaaaactgagtgtggagggtcgtggcatggtgaagtacctctaggctgtgtttattgtgcttgcccttgttagggtaaatagcctgttggctctgctacacaaggatgggtgttcttctgagcttcgtatctggacagtggctaatcaaagtgccttgtgaatgtgggatcatttttgaaattagtttgagggcttctagtatgttatgctgatgatcagtcgtcattgattaaatggtgccgcatgttatctacttatattattccttccttagcagctttctgaggatggcttcttccttataacatgttggtgtgtcgctgatacccattaattttggttccctaataagtttccaagtcattggtgtaatggaagtcatggctgttgctatgggtgatgcgcaacttggaatactatattattgccgtttggcatgtattatgctgttttcctgaagctctttagctaggttttctaccctttcatttgcttgtttagtattattagcttgtgagttgagacaaagatcttattcttctccagaaggcaaattgtactttttcctgttttagactaaacaaagtatttctcaagtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0042L06.1" temp_strand="-" temp_description="C06HBa0042L06.1  AC232856.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0042L06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="138850" stop="5841"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="138550" g_stop="138288" g_length="263"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="263" r_length="263" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="138287" i_stop="137615" i_length="673">
            <donor d_prob="0.905" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="137614" g_stop="137086" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="792" r_length="529" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="137085" i_stop="136828" i_length="258">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="136827" g_stop="136708" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="793" r_stop="912" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="136707" i_stop="136497" i_length="211">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="136496" g_stop="136276" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="913" r_stop="1133" r_length="221" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="136275" i_stop="136178" i_length="98">
            <donor d_prob="0.736" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="136177" g_stop="136048" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="1134" r_stop="1263" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="136047" i_stop="135944" i_length="104">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="135943" g_stop="135881" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1264" r_stop="1326" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="135880" i_stop="135797" i_length="84">
            <donor d_prob="0.616" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="135796" g_stop="135719" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1327" r_stop="1404" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="135718" i_stop="135200" i_length="519">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="135199" g_stop="135108" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1405" r_stop="1496" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="135107" i_stop="135016" i_length="92">
            <donor d_prob="0.866" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="135015" g_stop="134950" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1497" r_stop="1562" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="134949" i_stop="134836" i_length="114">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.947" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="134835" g_stop="134682" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="1563" r_stop="1716" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="134681" i_stop="134108" i_length="574">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="134107" g_stop="133456" g_length="652"/>
          <reference_exon_boundary r_type="cDNA" r_start="1717" r_stop="2368" r_length="652" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="133455" i_stop="132681" i_length="775">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.798" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="132680" g_stop="132648" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="2369" r_stop="2401" r_length="33" r_score="0.545"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0042L06.1" gen_strand="-" ref_id="SGN-U315731" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2401</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0042L06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U315731" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="138550" e_stop="138288"/>
          <exon e_start="137614" e_stop="137086"/>
          <exon e_start="136827" e_stop="136708"/>
          <exon e_start="136496" e_stop="136276"/>
          <exon e_start="136177" e_stop="136048"/>
          <exon e_start="135943" e_stop="135881"/>
          <exon e_start="135796" e_stop="135719"/>
          <exon e_start="135199" e_stop="135108"/>
          <exon e_start="135015" e_stop="134950"/>
          <exon e_start="134835" e_stop="134682"/>
          <exon e_start="134107" e_stop="133456"/>
          <exon e_start="132680" e_stop="132648"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAGTGTAGGCATATCTGGTCACAATAAATAAGGCAATCACAAAATGAAGTTAGAAATTTGACCGCGTTGATTGCTGCCTTCACAAGTAGAGTAAACAAAGTCCGAAAACCTCCATCGTTTCATAGCCTATAGAATTTGATTGAGCTACCCCTACTTCACAAATCATCTATATATATAATCTACTTTTCCAGACATACCCATCTAACTATCTTTTTCTCTCTGCGCCGTTGTAGCGTTCAAGATGAGTTACAACAACGATCCGTAAGTTTTTGCTTTTATTTTCCGCGAGAAGTTAAAGGGTTACGTTTCGATTGTTTTGATTTTGATTTAATGTTTGTAGTTGTGTTGTTTTTGGTGGATTTGGGTGTTTTTTTGGATGACCCTTTTGGTGATGAGATGAATTGGAGTTTCTGATGATGAAATTGATCGGGATTTTGGGGATTTTTGGTTGGTTTGGGTTGTTTTTGGATGACCCATTTTTGTGATAAGTCGAGTTTGGTTTTGTGGTTGATGAATTGATCTAGATTTGTGTTGTTTATTTCTCGACAGGTTGTTTTCTGGATGACCCGTTTCGATGATGAGTTGAATTAGGGTTCTGATGACGATTTGATCAGAAAGTTTGTGGCTTTTTGTGTTGCTTTTGTGTCGATTTTGGATGACGCCTTTTGGTGTGTTGAGTTGAATTAGGGTTTCCAATAATGAATTCGTTGAGATTTCTTATGGATCTTTTTTTTGGGGGCGTCTGCTCCTTTCTTTTGATCCATTTTGAACAACAGCAAAAGTTATGGTTACTAATGAAGATTTTGTCTGGAATTTTTTTGTATATTCCGTGATTTTCTGTGGGTCTGTGTTGTTTGGGATTTTGATCCTTTTTGGGGATGAGCTGAAATTGGATTTCAGATGGTGTATTGATTGGAATTTTTTCATCTTCCAGGTACATAGATGAGGATGGAGAGGCATTGGTGGATTTTGATGAGGATGTCCGATCAGATAACGAGCAACAGGAACAATTTCTTGGTGACAATCTGGACGATGATGATGCATGGAATCAGAGACAGCGAGAGCGGTCACCGACCCCAGTATATGATGATCTTAACAAGTCTAAGCCCAGGAAGCGGTTAATTAAGAAATCTTCAGCTAGAGAAAACACACCGGATATTGGGCTAGGAGATGAGGAGGATGCTTATGGTGGTGCTGCTGCTGATGACATGACTGGCAATATGCATGATGAGTTTGACGGCGGTGGTCCTTCATCTTCCTCTGCTGGTGGTGGAAAGAGGAAGAGGTTTGGCATGGAGTTTAGTGAAGAGAAGAGGAAGGAGAAGAAGGGGAGAGAGAAAGGAGAGAAGAAATTTAAGTTGAGGAAAAATGGGGGTTACTCTGGAGGAAGCAGGTTAAAGGACCAGGAGGGGGATCGGGAGATGAAGGAGATGTGGGACACCATTGCTGGTGGTGACTCTGAGGTTTGGCCAATTATCTCTGTTATCATCTTTCAAATAGTTTTGTAATTCTTCACGTATCACAAGAAACTCTTTTTCTTTTCCTTCTTTGGGGATACTGATTTGAATATGAGTTACTGAAATTTCCTTGTCAGGAAAAGCAAGTTTTACTAATGATGTTAGTTTAGTCTGTAGGAGCTAATAGAGTTGAGTGGATATCCAAATTGAAGGCAGTTTGGTTTTAATGACATGTTTTGTGATGGTCTTTGTTTTCAAATGTAGGATGACCAAGAAGGTCCAAAGAATGCCGATGATGATAACTTCATTGATGATAGTGGTGTAGATCCAGCTGACAGGTATGGAAGCGACAATGAACCACTGTCTCCCAGCAATGCTCCACAGGTAGAATTTTGGATACTTGTAGTTCCTTCCTGCTATATTTGCTTATCATAATTTCCCAACATTGCGGATGCTTTATGCACGGTGTTTTGTAAAAATCTACAGAAGAGTGCTGATTTTGAAGCTTTCTTGCTTTTATCTGGAATACATTAGACGCTTGTGAAGCCAATTGGTGGTATGGATGGTATATTTATTCTAATTTTATTCTTTTCAGGCTGAAGAAGGGGAAGAGGATGACGAAATCAAGCAGCTCTTCAAGGGAGGCAAGAAGAAAAAGAAAACTGAAAAGAGTGCAGCAGAAATTGCATTGCTAGTAGAGAATGTTATGGCTGAGTTGGAAGTTGTTGCCGAGGAGGATGCCGAACTGAATAGACATTCCAAACCTGCTATAAATAAACTAAAAAAACTCCCTCTTCTCATAGATGTCCTGTCTAAGTGAGTGAGCTTGTCATTTATTTTCATGGCAGTAACTGAATTTTCTTTTTGGAGGCTAATAGATGTACATTGACACTTCCCAATTTCTCAATTTGCAGGAAGCAACTTCAGCAAGAATTTTTAGATCATGGAGTGTTGACTCTTTTGAGGACTTGGCTTGAACCCCTTCCAGATGGAAGCCTGCCCAACATAAACATTCGTGCTGCGATCCTAAAGATCCTTACTGATGTATGACCATGCTTTCTAGATTCGACTTAGTTGTTTATCTGTTTGCAACTTTGTATTTTGTGTTATCTGACTTGACACTTCTATGTTTCGTGATGATCCTGTAGTATCCAATTGATCTTGAGCAGTATGATAGAAGAGAGATGTTGAAAAAGAGTGGTCTTGGAAAGGTACCTTTCATGTAGAACTAGTAGCGTAATAGCTTCCAAGATGGAGGTACATGGGGGAGACTTATTGTTACTTACTTGATGTAGGTTATTATGTTCCTCTCGAAATCAGATGAGGAGACTACATCTAACAGGAAACTTGCCAAGGATTTGGTTGACAAATGGGTAAGATGGATTTAACTATTTATTAATTTCTTCTTTCCCTTTGTGAAAGGAATTATAAAAGGAGGGATTCTCTGTTGAGGGCCTGGGGCTTAGCTTTCTCCACGTCTTGGAGTGTTAATGATCTTTTGTCCGCTAAATTGCTGAGTTGGTTTCCAAGTTCATTACAGTATCTTGAGAATATATTAGGCAAACATCTTTCCAGCTTTAGCTTATTTTGTCATTCAGCTATATACTCTTCTGTTTTTCTGGGGAGGTGGGAGACTGCAACTCATGCTGTCTAGGTAACTATGTATTTGGTATTTCAATATAAAATGGGGTTATAGGATTTTATTTATTTTTGTATAGGTCCTATCTTTTTAATAGAATTATCCTTATATATGTATATTTACAATAGGGCATCTTAGTACTGGCAAATTTTTCACCGAAGAACATAAAACATTATTATCTGTATTTGGTTATTGCACAGAATAGATGCTTATCAACATGAAAAAGCTGACATTTGATTGTTTTTTTATTCAGAGTCGACCAATATTCAACAAGAGTACACGGTTTGAAGACATGAGAAATCTAGAGGATGAGAGAGCTGCTCAATACAGGCGGCCCTTGAAAAAGTATTGATTATTTTCAGTACTTCTACTGGTCCTCGTACCAGTTGTAGTCTGAATATTTACCATCCATAACTATATTTTCTATGTTGTCACAGACCCATGAATAAAGCATCAGGAATGGAATCCAGAGACGATGACCTTGACTTGGCTGGATATTCACAGTAAGATGTTCTGACTTCACACCTTTTGATCCAAGTATCTTTGGATTGGGTGCTGTGAGTTGTCTGCTGCATCCTTATTTTTTCTCGTGGCTTAATATGCTTGCAAATTCGCAGAGGGCAAAAATCTGGTCAGTCATCTGGTAGGCAACTTACATCAAGGCCTGAAGCAATGTCAATGGATTTTGTGGTGCGTCCACAGTCTAAGATTGATCCTGACGAAGTTAGGGCCAGGGCTAGAGCAATGGTTCAAGACCAGCGCCGAATGAAGGTGTGTACGTCTTGCTAAGTAAATTTGAATTTATATTATTTTCTTCATTTCACTCTCCTCCATTTTTTAGTTTCTTTGCACTAAAGATAAATAAGAATAAAAAGGATCTTGATGCCTTATTAATGAAGCTTCTTATTTTTTTAAAAAAGGAACAGAAGGGGGATGCTTTTTAGAAAAAGGCTCCTGACATCCTTATCAGAGGAGCCAGTAATAGCTTTTTGCCTATAAAATGAAGTGCTCAATTTGGTGCTTGTCTTGGAATCCCTCCTAACTTAGATACTCCTGTGAAATTCTTTAATTCAGGGGAAATGATGTAAATTATAATGCTGGAGTCTCTCCTAGTTGTGGTTTCAGTGAATAGATCTTGTTGTGCGTGGGACATGAGATTAATCATCCTCTGGTATTCTTAGTTTCAGTGAGTGGGTTTTATGGCGTGAGATGACCCTATATTTTTCTCCTACTGAGTACTAATTTTATCTCTGGAGTTTGATCTTGTTACGATGTTAGTGCCTTTGCTGCTATGTATTACGAATGATTCTGATCTAACACTGAAATATTGGTATTTTCATTGCAGATGAATAAGAAACTGCAGCAGTTAAAAGCTCCCAAAAAGAAGAAACTCCAAGCCACAAAACTGAGTGTGGAGGGTCGTGGCATGGTGAAGTACCTCTAGGCTGTGTTTATTGTGCTTGCCCTTGTTAGGGTAAATAGCCTGTTGGCTCTGCTACACAAGGATGGGTGTTCTTCTGAGCTTCGTATCTGGACAGTGGCTAATCAAAGTGCCTTGTGAATGTGGGATCATTTTTGAAATTAGTTTGAGGGCTTCTAGTATGTTATGCTGATGATCAGTCGTCATTGATTAAATGGTGCCGCATGTTATCTACTTATATTATTCCTTCCTTAGCAGCTTTCTGAGGATGGCTTCTTCCTTATAACATGTTGGTGTGTCGCTGATACCCATTAATTTTGGTTCCCTAATAAGTTTCCAAGTCATTGGTGTAATGGAAGTCATGGCTGTTGCTATGGGTGATGCGCAACTTGGAATACTATATTATTGCCGTTTGGCATGTATTATGCTGTTTTCCTGAAGCTCTTTAGCTAGGTTTTCTACCCTTTCATTTGCTTGTTTAGTATTATTAGCTTGTGAGTTGAGACAAAGATCTTATTCTTCTCCAGAAGGCAAATTGTACTTTTTCCTGTTTTAGACTAAACAAAGTATTTCTCAAGTACTATTGTTGTTATTCCTCCAAATTTGCCGACTGAGTGGGGACTCCTTCCTCTAACAATGGCGGTATTGTCAAGCGCTGGAAATGGAGAATCTTTTGGCAGGAAGCACTTCACCCTTTTTAATGGGCTTACCTCGTCATTTGACGACTCAGTGCATGGGTGTTACGAGTCCATTCCATTGACTAGGGATATAATAATTCAATATATTGAATGTGAATTATAGTTAGATTTTGAAGTATTTTAATAGTTAAACCAAAGACTATGAGGGGAGTCGATGGAACCACATTGGTATCTCTTTAGTTTTTTGGTAAATCTGATATTTGTCCTCTTAATATTCAACTATATCGACTTCTTTGCCTGCGATATGCATCCACCAAAATGAATAGATAATATATAAGCTTTGCCTGTATTCAGATGGAAACACACGAGATAATTTTAAATTTACTGTGTTCGTTTGAATCTGTTGGACCTATAGAGTCACCAACTCTGTAAGTTGGAGTGCTGCGAACAAAATAGTGTCAAACTTGTCAATATTCTATTTCTTAAAAAACAATGTGATCATAACAATTTTATTTTATTTTTTATAAAAATATATATTTTGTGGGTGGGAAGCGTTGTTTTGGAGAAAATGTATGTGTTATATAGGCAGCCTCTTAGGTTTAAATTCAGAGCTGGCAGTTCACTTATAAAATACTAACTAATATTCTCTTTGTCAGTACTTCCAAATTTCAATACAAATCAACTATCGACATGTTAATTTGTACTTATTTAAAGGTAAAACTTATATTTGATATATTAGAGAAAAGA</genome_strand>
        <mrna_strand>ACAAGTGTAGGTATATCTGGTGACAATAAATAAGGCAATCACAAAATGAAGTTAGAAATTTGACCGCGTTGATTGCTGCCTTCACAAGTAGAGTAAACAAAGTCCGAAAACCTCCATCGTTTCATAGCCTATAGAATTTGATTGAGCTACCCCTACTTCACAAATCATCTATATATATAATCTACTTTTCCAGACATACCCATCTAACTATCTTTTTCTCTCTGCGCCGTTGTAGCGTTCAAGATGAGTTACAACAACGATCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACATAGATGAGGATGGAGAGGCATTGGTGGATTTTGATGAGGATGTCCGATCAGATAACGAGCAACAGGAACAATTTCTTGGTGACAATCTGGACGATGATGATGCATGGAATCAGAGACAGCGAGAGCGGTCACCGACCCCAGTATATGATGATCTTAACAAGTCTAAGCCCAGGAAGCGGTTAATTAAGAAATCTTCAGCTAGAGAAAACACACCGGATATTGGGCTAGGAGATGAGGAGGATGCTTATGGTGGTGCTGCTGCTGATGACATGACTGGCAATATGCATGATGAGTTTGACGGCGGTGGTCCTTCATCTTCCTCTGCTGGTGGTGGAAAGAGGAAGAGGTTTGGCATGGAGTTTAGTGAAGAGAAGAGGAAGGAGAAGAAGGGGAGAGAGAAAGGAGAGAAGAAATTTAAGTTGAGGAAAAATGGGGGTTACTCTGGAGGAAGCAGGTTAAAGGACCAGGAGGGGGATCGGGAGATGAAGGAGATGTGGGACACCATTGCTGGTGGTGACTCTGAG..................................................................................................................................................................................................................................................................GATGACCAAGAAGGTCCAAAGAATGCCGATGATGATAACTTCATTGATGATAGTGGTGTAGATCCAGCTGACAGGTATGGAAGCGACAATGAACCACTGTCTCCCAGCAATGCTCCACAG...................................................................................................................................................................................................................GCTGAAGAAGGGGAAGAGGATGACGAAATCAAGCAGCTCTTCAAGGGAGGCAAGAAGAAAAAGAAAACTGAAAAGAGTGCAGCAGAAATTGCATTGCTAGTAGAGAATGTTATGGCTGAGTTGGAAGTTGTTGCCGAGGAGGATGCCGAACTGAATAGACATTCCAAACCTGCTATAAATAAACTAAAAAAACTCCCTCTTCTCATAGATGTCCTGTCTAA..................................................................................................GAAGCAACTTCAGCAAGAATTTTTAGATCATGGAGTGTTGACTCTTTTGAGGACTTGGCTTGAACCCCTTCCAGATGGAAGCCTGCCCAACATAAACATTCGTGCTGCGATCCTAAAGATCCTTACTGAT........................................................................................................TATCCAATTGATCTTGAGCAGTATGATAGAAGAGAGATGTTGAAAAAGAGTGGTCTTGGAAAG....................................................................................GTTATTATGTTCCTCTCGAAATCAGATGAGGAGACTACATCTAACAGGAAACTTGCCAAGGATTTGGTTGACAAATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGACCAATATTCAACAAGAGTACACGGTTTGAAGACATGAGAAATCTAGAGGATGAGAGAGCTGCTCAATACAGGCGGCCCTTGAAAAA............................................................................................ACCCATGAATAAAGCATCAGGAATGGAATCCAGAGACGATGACCTTGACTTGGCTGGATATTCACA..................................................................................................................AGGGCAAAAATCTGGTCAGTCATCTGGTAGGCAACTTACATCAAGGCCTGAAGCAATGTCAATGGATTTTGTGGTGCGTCCACAGTCTAAGATTGATCCTGACGAAGTTAGGGCCAGGGCTAGAGCAATGGTTCAAGACCAGCGCCGAATGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAATAAGAAACTGCAGCAGTTAAAAGCTCCCAAAAAGAAGAAACTCCAAGCCACAAAACTGAGTGTGGAGGGTCGTGGCATGGTGAAGTACCTCTAGGCTGTGTTTATTGTGCTTGCCCTTGTTAGGGTAAATAGCCTGTTGGCTCTGCTACACAAGGATGGGTGTTCTTCTGAGCTTCGTATCTGGACAGTGGCTAATCAAAGTGCCTTGTGAATGTGGGATCATTTTTGAAATTAGTTTGAGGGCTTCTAGTATGTTATGCTGATGATCAGTCGTCATTGATTAAATGGTGCCGCATGTTATCTACTTATATTATTCCTTCCTTAGCAGCTTTCTGAGGATGGCTTCTTCCTTATAACATGTTGGTGTGTCGCTGATACCCATTAATTTTGGTTCCCTAATAAGTTTCCAAGTCATTGGTGTAATGGAAGTCATGGCTGTTGCTATGGGTGATGCGCAACTTGGAATACTATATTATTGCCGTTTGGCATGTATTATGCTGTTTTCCTGAAGCTCTTTAGCTAGGTTTTCTACCCTTTCATTTGCTTGTTTAGTATTATTAGCTTGTGAGTTGAGACAAAGATCTTATTCTTCTCCAGAAGGCAAATTGTACTTTTTCCTGTTTTAGACTAAACAAAGTATTTCTCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U342748" ref_strand="+" ref_description="SGN-U342748        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>tgacatagtactattactctccagaaggcaaattgtactttttcctgttttagactaaacaaagtatttctcaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0042L06.1" temp_strand="-" temp_description="C06HBa0042L06.1  AC232856.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0042L06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="133829" stop="133154"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133530" g_stop="133454" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0042L06.1" gen_strand="-" ref_id="SGN-U342748" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>77</cumulative_length_of_scored_exons>
        <coverage percentage="1.013" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0042L06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U342748" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="133530" e_stop="133454"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACAAAGATCTTATTCTTCTCCAGAAGGCAAATTGTACTTTTTCCTGTTTTAGACTAAACAAAGTATTTCTCAAGT</genome_strand>
        <mrna_strand>TGACATAG-TACTATTACTCTCCAGAAGGCAAATTGTACTTTTTCCTGTTTTAGACTAAACAAAGTATTTCTCAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U338391" ref_strand="+" ref_description="SGN-U338391        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>tgggatcaatatatttaggagaatactgatggaggaggacattgacctctcttctttttttaaaaaaaaaaattgttgtttcttttccaattatgtattgcattgtagtgcagaagtttgaattcagacatttatttatgaattatgcatttgcttttgatttggaaactgacaaaatttacatttcagaggaagccaattagattatatctgttagtttagcattgtgcaaaaggtaagaatttgttgacttgacaccgactttatggagaaaattgacttgtacagcaatcgccgtgcagtgcagaaggcggtcagtatctcaaactaacctatgttctgcgcacactttctttctccgcttaggataaaatatatctttgttttcaaaaatggtaaatggtttgtgacttcagttggatgcatttcaatgttttatcttctcacctttcctgtggtcaagtatacgtttgtgttagaaacttagaccaataagctattcaagtcacttggcatcggttgctttagtagtatgtatggacttctatatttctacggaatgcctttgttcaatttgtcaagtatctgctttctaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0042L06.1" temp_strand="+" temp_description="C06HBa0042L06.1  AC232856.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0042L06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="145334" stop="146534"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="145634" g_stop="146234" g_length="601"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="601" r_length="601" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0042L06.1" gen_strand="+" ref_id="SGN-U338391" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0042L06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U338391" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="145634" e_stop="146234"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGATCAATATATTTAGGAGAATACTGATGGAGGAGGACATTGACCTCTCTTCTTTTTTTAAAAAAAAAAATTGTTGTTTCTTTTCCAATTATGTATTGCATTGTAGTGCAGAAGTTTGAATTCAGACATTTATTTATGAATTATGCATTTGCTTTTGATTTGGAAACTGACAAAATTTACATTTCAGAGGAAGCCAATTAGATTATATCTGTTAGTTTAGCATTGTGCAAAAGGTAAGAATTTGTTGACTTGACACCGACTTTATGGAGAAAATTGACTTGTACAGCAATCGCCGTGCAGTGCAGAAGGCGGTCAGTATCTCAAACTAACCTATGTTCTGCGCACACTTTCTTTCTCCGCTTAGGATAAAATATATCTTTGTTTTCAAAAATGGTAAATGGTTTGTGACTTCAGTTGGATGCATTTCAATGTTTTATCTTCTCACCTTTCCTGTGGTCAAGTATACGTTTGTGTTAGAAACTTAGACCAATAAGCTATTCAAGTCACTTGGCATCGGTTGCTTTAGTAGTATGTATGGACTTCTATATTTCTACGGAATGCCTTTGTTCAATTTGTCAAGTATCTGCTTTCTAAAAAAA</genome_strand>
        <mrna_strand>TGGGATCAATATATTTAGGAGAATACTGATGGAGGAGGACATTGACCTCTCTTCTTTTTTTAAAAAAAAAAATTGTTGTTTCTTTTCCAATTATGTATTGCATTGTAGTGCAGAAGTTTGAATTCAGACATTTATTTATGAATTATGCATTTGCTTTTGATTTGGAAACTGACAAAATTTACATTTCAGAGGAAGCCAATTAGATTATATCTGTTAGTTTAGCATTGTGCAAAAGGTAAGAATTTGTTGACTTGACACCGACTTTATGGAGAAAATTGACTTGTACAGCAATCGCCGTGCAGTGCAGAAGGCGGTCAGTATCTCAAACTAACCTATGTTCTGCGCACACTTTCTTTCTCCGCTTAGGATAAAATATATCTTTGTTTTCAAAAATGGTAAATGGTTTGTGACTTCAGTTGGATGCATTTCAATGTTTTATCTTCTCACCTTTCCTGTGGTCAAGTATACGTTTGTGTTAGAAACTTAGACCAATAAGCTATTCAAGTCACTTGGCATCGGTTGCTTTAGTAGTATGTATGGACTTCTATATTTCTACGGAATGCCTTTGTTCAATTTGTCAAGTATCTGCTTTCTAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326732" ref_strand="+" ref_description="SGN-U326732        Tomato 200607 #1 [3 ESTs aligned]">
      <seq>aaaaaattgttgtttcttttccaattatgtattgcattgtagtgcagaagtttgaattcagacatttatttatgaattatgcatttgctattgatttggaaactgacaaaatttacatttcacaggaagccaattagattatatctgttagtttagcattgtgcaaaaggtaagaatttgttgacttgacaccgactttatggagaaaattgacttgtacagcaatcgccgtgcagtgcagaaggcggttttgcattttcttcaatatgatgtagcttcccggaaatttatcacagatggtttttactattagtatttagcctttttttggtacttgtaaatagatagttatatctgtagataaaatggaaccaaagggggttggatttttagatagtggccgtaggactgtggttggagaaaagagtaaagtggttactcagaatttggcacatctgcttagagccagcagtgagaaaatatcaattcaatccaactgtgattgaaagcttgaaaagaggaaaaggatcgttcactgggagtctaatagtcaatcacatctcaggatatatgaacacaagaactacctgaacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0042L06.1" temp_strand="+" temp_description="C06HBa0042L06.1  AC232856.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0042L06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="145400" stop="146994"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="145700" g_stop="145946" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="247" r_length="247" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="145947" i_stop="146345" i_length="399">
            <donor d_prob="0.789" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="146346" g_stop="146694" g_length="349"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="596" r_length="349" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0042L06.1" gen_strand="+" ref_id="SGN-U326732" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0042L06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U326732" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="145700" e_stop="145946"/>
          <exon e_start="146346" e_stop="146694"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAATTGTTGTTTCTTTTCCAATTATGTATTGCATTGTAGTGCAGAAGTTTGAATTCAGACATTTATTTATGAATTATGCATTTGCTTTTGATTTGGAAACTGACAAAATTTACATTTCAGAGGAAGCCAATTAGATTATATCTGTTAGTTTAGCATTGTGCAAAAGGTAAGAATTTGTTGACTTGACACCGACTTTATGGAGAAAATTGACTTGTACAGCAATCGCCGTGCAGTGCAGAAGGCGGTCAGTATCTCAAACTAACCTATGTTCTGCGCACACTTTCTTTCTCCGCTTAGGATAAAATATATCTTTGTTTTCAAAAATGGTAAATGGTTTGTGACTTCAGTTGGATGCATTTCAATGTTTTATCTTCTCACCTTTCCTGTGGTCAAGTATACGTTTGTGTTAGAAACTTAGACCAATAAGCTATTCAAGTCACTTGGCATCGGTTGCTTTAGTAGTATGTATGGACTTCTATATTTCTACGGAATGCCTTTGTTCAATTTGTCAAGTATCTGCTTTCTAAAAAAAATTAAAGCTGGACAAAGCCCTTTAAGTTGCAGTCAACTGATATATTCATGAAGATGCTGTTATTGTTTCCTATTTTGACTGATTGACTTCCTATTTGTTTTTCTTTGCTAGGTTTTGCATTTTCTTCAATATGATGTAGCTTCCCGGAAATTTATCACAGATGGTTTTTACTATTAGTATTTAGCCTTTTTTTGGTACTTGTAAATAGATAGTTATATCTGTAGATAAAATGGAACCAAAGGGGGTTGGATTTTTAGATAGTGGCCGTAGGACTGTGGTTGGAGAAAAGAGTAAAGTGGTTACTCAGAATTTGGCACATCTGCTTAGAGCCAGCAGTGAGAAAATATCAATTCAATCCAACTGTGATAGAAAGCTTGAGAAGAGGAAAAGGATCGTTCACTGCGAGTCTAATAGTCAATCACATCTCAGGATATCTGAACACAAGAACTACCTGAACTTT</genome_strand>
        <mrna_strand>AAAAAATTGTTGTTTCTTTTCCAATTATGTATTGCATTGTAGTGCAGAAGTTTGAATTCAGACATTTATTTATGAATTATGCATTTGCTATTGATTTGGAAACTGACAAAATTTACATTTCACAGGAAGCCAATTAGATTATATCTGTTAGTTTAGCATTGTGCAAAAGGTAAGAATTTGTTGACTTGACACCGACTTTATGGAGAAAATTGACTTGTACAGCAATCGCCGTGCAGTGCAGAAGGCG...............................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGCATTTTCTTCAATATGATGTAGCTTCCCGGAAATTTATCACAGATGGTTTTTACTATTAGTATTTAGCCTTTTTTTGGTACTTGTAAATAGATAGTTATATCTGTAGATAAAATGGAACCAAAGGGGGTTGGATTTTTAGATAGTGGCCGTAGGACTGTGGTTGGAGAAAAGAGTAAAGTGGTTACTCAGAATTTGGCACATCTGCTTAGAGCCAGCAGTGAGAAAATATCAATTCAATCCAACTGTGATTGAAAGCTTGAAAAGAGGAAAAGGATCGTTCACTGGGAGTCTAATAGTCAATCACATCTCAGGATATATGAACACAAGAACTACCTGAACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U327939" ref_strand="+" ref_description="SGN-U327939        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | WWE domain-containing protein / ceo protein, putative (CEO), contains Pfam domain, PF02825: WWE domain; identical to cDNA for ceo protein (ceo gene) GI:11044956 | chr1:11612117-11616198 FORWARD | Aliases: None(evalue: 1e-37, score=102) genbank/nr: Poly(evalue: 4e-21, score=105)">
      <seq>ggaaaaggatcgttcactgcgagtctaatagtcaatcacatctcaggatatctgaacacaagaactacctgaactttaagagaagcagactgccgctacgtgtactgttttatcagaacggtgaatggaccgacttccctcaagatattattcctatagttaaagaagattttcgggcgaaaaagactgttattgaggtgaaagtttgtgactttcatataattcttgatattctacatatggttcaaatagatgtaataaatggtttacagaaacctattgcctggatagatgaagtaggtaggtgtttcttccctgagtcttatcttatcagtagtgaaatgcttgggaattttgaaaccctgtcaaagagaactgaagagtttatgacaactgagccagataggataactgatatgaagttgcaactcgacactgacttaaatggactggataatcgcaatttggaagaagatgtggaagagtcaaatattggttacaagaggaataaagtatgtcctcttaaagacagtcaagaagttgctgattataaaaaatcagatgcaaaaattgcacaagttgcagaaaataaacagaaccaagaaacaccgtctcctgacttagaangctagcctgaaatttgtgaatgcagaatctgtcaaaaatatgtttattatgggaatgaatgttaaccctaacaagtgtgagatcaaaattaacaaatgctctagtaattatttgacaactcgcttagaactctttgagaagcaggttgaaataacgcaaaaatatcgtggaaactcaaatgttcgatatgcatggcttgccgcttctaaagatttgatatctacaattatgaagtacggccttgcacctggaggatctaagtataggcctaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0042L06.1" temp_strand="+" temp_description="C06HBa0042L06.1  AC232856.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0042L06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="146318" stop="147816"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="146618" g_stop="147516" g_length="899"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="900" r_length="900" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0042L06.1" gen_strand="+" ref_id="SGN-U327939" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>899</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0042L06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U327939" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="146618" e_stop="147516"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAAGGATCGTTCACTGCGAGTCTAATAGTCAATCACATCTCAGGATATCTGAACACAAGAACTACCTGAACTTTAAGAGAAGCAGACTGCCGCTACGTGTACTGTTTTATCAGAACGGTGAATGGACCGACTTCCCTCAAGATATTATTCCTATAGTTAAAGAAGATTTTCGGGCGAAAAAGACTGTTATTGAGGTGAAAGTTTGTGACTTTCATATAATTCTTGATATTCTACATATGGTTCAAATAGATGTAATAAATGGTTTACAGAAACCTATTGCCTGGATAGATGAAGTAGGTAGGTGTTTCTTCCCTGAGTCTTATCTTATCAGTAGTGAAATGCTTGGGAATTTTGAAACCCTGTCAAAGAGAACTGAAGAGTTTATGACAACTGAGCCAGATAGGATAACTGATATGAAGTTGCAACTCGACACTGACTTAAATGGACTGGATAATCGCAATTTGGAAGAAGATGTGGAAGAGTCAAATATTGGTTACAAGAGGAATAAAGTATGTCCTCTTAAAGACAGTCAAGAAGTTGCTGATTATAAAAAATCAGATGCAAAAATTGCACAAGTTGCAGAAAATAAACAGAACCAAGAAACACCGTCTCCTGACTTAGAA-GCTAGCCTGAAATTTGTGAATGCAGAATCTGTCAAAAATATGTTTATTATGGGAATGAATGTTAACCCTAACAAGTGTGAGATCAAAATTAACAAATGCTCTAGTAATTATTTGACAACTCGCTTAGAACTCTTTGAGAAGCAGGTTGAAATAACGCAAAAATATCGTGGAAACTCAAATGTTCGATATGCATGGCTTGCCGCTTCTAAAGATTTGATATCTACAATTATGAAGTACGGCCTTGCACCTGGAGGATCTAAGTATAGGCCTAAA</genome_strand>
        <mrna_strand>GGAAAAGGATCGTTCACTGCGAGTCTAATAGTCAATCACATCTCAGGATATCTGAACACAAGAACTACCTGAACTTTAAGAGAAGCAGACTGCCGCTACGTGTACTGTTTTATCAGAACGGTGAATGGACCGACTTCCCTCAAGATATTATTCCTATAGTTAAAGAAGATTTTCGGGCGAAAAAGACTGTTATTGAGGTGAAAGTTTGTGACTTTCATATAATTCTTGATATTCTACATATGGTTCAAATAGATGTAATAAATGGTTTACAGAAACCTATTGCCTGGATAGATGAAGTAGGTAGGTGTTTCTTCCCTGAGTCTTATCTTATCAGTAGTGAAATGCTTGGGAATTTTGAAACCCTGTCAAAGAGAACTGAAGAGTTTATGACAACTGAGCCAGATAGGATAACTGATATGAAGTTGCAACTCGACACTGACTTAAATGGACTGGATAATCGCAATTTGGAAGAAGATGTGGAAGAGTCAAATATTGGTTACAAGAGGAATAAAGTATGTCCTCTTAAAGACAGTCAAGAAGTTGCTGATTATAAAAAATCAGATGCAAAAATTGCACAAGTTGCAGAAAATAAACAGAACCAAGAAACACCGTCTCCTGACTTAGAANGCTAGCCTGAAATTTGTGAATGCAGAATCTGTCAAAAATATGTTTATTATGGGAATGAATGTTAACCCTAACAAGTGTGAGATCAAAATTAACAAATGCTCTAGTAATTATTTGACAACTCGCTTAGAACTCTTTGAGAAGCAGGTTGAAATAACGCAAAAATATCGTGGAAACTCAAATGTTCGATATGCATGGCTTGCCGCTTCTAAAGATTTGATATCTACAATTATGAAGTACGGCCTTGCACCTGGAGGATCTAAGTATAGGCCTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U331072" ref_strand="+" ref_description="SGN-U331072        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: SRO1 | Encodes a WWE domain-containing protein with 76% similarity to RCD1. The protein also contains a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. | chr2:14923803-14927456 REVERSE | Aliases: T32F12.11, T32F12_11, SRO1, SIMILAR TO RCD ONE 1, SIMILAR TO RCD-ONE 1(evalue: 1e-22, score=103) genbank/nr: gi|15810143|gb|AAL07215.1| unknown protein [Arabidopsis thaliana](evalue: 4e-21, score=105)">
      <seq>gcgatgctgatgaaaatggcgtacattacatggtttttgctcgtgtgattttgggtaatatggaacctttacactgcggatctgaacaatggcatcccagtgatgaaaaatatgatagtggagttgatgatctcgagaatcctactcattatgttatttggaatatgaatttgaacacacatatatacccagtgtgtgttgtgagcttcagaattcctccaggagctgaaggaccccgcgttggaaatgatagtcggattgatgtctcaggtgtcaatacttgtcctcggggccctgtggaacaggtacccacaaatacatttccgaaggacttgggaagtttagctacaatattgtacacttaggttgttggggggattttattatatgatcttcattaaactataagatgggggagttgtgagagacagtgttggacatgcaacaaaatcgatttttgaaataaatttaggattttgaaaatttttaaagaaatcaagcacaataggcaaagaagaggaacatgaagttcactaattcgaaaggccatgtcttgagtttctttggcaaaatgagtgaacatcaaaagaactgtaagttactttatatgctttgacatgtttgttgcgcttatatttattgtgtcgatttatcttcttgatcaatggttgagttacttcctcagatgcatgctagttatctaggaaaacattgatgccataggcacttgataaagtactctctagaagattgtttgatattatttaacgggtttgcaacaaataatctgcatccactactgaaaaggcatagtaattgctcttgcacatgctttaacaccggtattcttcatctgccgcacaagtaacatttctgttttacatgtcctacaagaaacatgtctgttttgcagccttgctgggattgtatctgttcatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0042L06.1" temp_strand="+" temp_description="C06HBa0042L06.1  AC232856.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0042L06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="147647" stop="149991"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="147947" g_stop="148177" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="231" r_length="231" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="148178" i_stop="148982" i_length="805">
            <donor d_prob="0.242" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="148983" g_stop="149691" g_length="709"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="940" r_length="709" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0042L06.1" gen_strand="+" ref_id="SGN-U331072" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>940</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0042L06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U331072" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="147947" e_stop="148177"/>
          <exon e_start="148983" e_stop="149691"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGATGCTGATGAAAATGGCGTACATTACATGGTTTTTGCTCGTGTGATTTTGGGTAATATGGAACCTTTACACTGCGGATCTGAACAATGGCATCCCAGTGATGAAAAATATGATAGTGGAGTTGATGATCTCGAGAATCCTACTCATTATGTTATTTGGAATATGAATTTGAACACACATATATACCCAGTGTGTGTTGTGAGCTTCAGAATTCCTCCAGGAGCTGAAGGTAATCTCCACTTTGTTCCTATATTGAAGGATTAGGATGACACCATCCGTACTGGTCTTATAACTCTTTAACAATTTTTGTTTGAAACTGTTGTTAGTGTCTATAGCCATGGAGCCTGCTTCACATTACTCTCTCTTTACATGCCGTGCCATTCCCACGTCTCTTTCCTTGTAATGGAAACTTCACCCTTATTCATTAAACTTTTCAGAAGTATCATATTCACTTTTATCTTTGTGAAAGTCAAATGCCAGAAAAAAAGTACAGTATCTTAACTCTACTCTGAGCCCTAGTTTTCCTCATAACCAAATTCTTCTCAATGAATTTTTGGAGTTAAAATTGAATTTCAAGTTAGTTAGTATTTTGGAAATAAGATTTAGTTATTTAGTAAGTGTGTCGAAAGTATACAAGCAACATTTGTGTCATATCAAAGTAACAAGAAGTATTTATGCGTTAGTGAAGGATTATTCATTTGACTGGGAAGTGAAATAGGAGAACCAATTTTGGTTTAGACACGGTATATGATATACTCTTATTTTTCCAATTTATGATCAATTATAGTATATTTCCTTTGAGACATCTGCTTTCTGGAAAAACTTTGAATATAAGAATTATGCGGTGAAATTCTCAATGTTCTCTAGATCTGTGAAATAAATGAAGTGGCAAGTTTGTTGCTGATTTCAGATTCCTTTTGTTCATTTTCTCTTTTATTTTTATTTTTAGCATTTTAAAAATTGCGGAAAACTTTAAATATTTTTCATTGAAAAATCATGCAGCACTTGAATTAACGCTTCCACGCTTTTTACAGGACCCCGCGTTGGAAATGATAGTCGGATTGATGTCTCAGGTGTCAATACTTGTCCTCGGGGCCCTGTGGAACAGGTACCCACAAATACATTTCCGAAGGACTTGGGAAGTTTAGCTACAATATTGTACACTTAGGTTGTTGGGGGGATTTTATTATATGATCTTCATTAAACTATAAGATGGGGGAGTTGTGAGAGACAGTGTTGGACATGCAACAAAATCGATTTTTGAAATAAATTTAGGATTTTGAAAATTTTTAAAGAAATCAAGCACAATAGGCAAAGAAGAGGAACATGAAGTTCACTAATTCGAAAGGCCATGTCTTGAGTTTCTTTGGCAAAATGAGTGAACATCAAAAGAACTGTAAGTTACTTTATATGCTTTGACATGTTTGTTGCGCTTATATTTATTGTGTCGATTTATCTTCTTGATCAATGGTTGAGTTACTTCCTCAGATGCATGCTAGTTATCTAGGAAAACATTGATGCCATAGGCACTTGATAAAGTACTCTCTAGAAGATTGTTTGATATTATTTAACGGGTTTGCAACAAATAATCTGCATCCACTACTGAAAAGGCATAGTAATTGCTCTTGCACATGCTTTAACACCGGTATTCTTCATCTGCCGCACAAGTAACATTTCTGTTTTACATGTCCTACAAGAAACATGTCTGTTTTGCAGCCTTGCTGGAATTGTATCTGTTCATCA</genome_strand>
        <mrna_strand>GCGATGCTGATGAAAATGGCGTACATTACATGGTTTTTGCTCGTGTGATTTTGGGTAATATGGAACCTTTACACTGCGGATCTGAACAATGGCATCCCAGTGATGAAAAATATGATAGTGGAGTTGATGATCTCGAGAATCCTACTCATTATGTTATTTGGAATATGAATTTGAACACACATATATACCCAGTGTGTGTTGTGAGCTTCAGAATTCCTCCAGGAGCTGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCCGCGTTGGAAATGATAGTCGGATTGATGTCTCAGGTGTCAATACTTGTCCTCGGGGCCCTGTGGAACAGGTACCCACAAATACATTTCCGAAGGACTTGGGAAGTTTAGCTACAATATTGTACACTTAGGTTGTTGGGGGGATTTTATTATATGATCTTCATTAAACTATAAGATGGGGGAGTTGTGAGAGACAGTGTTGGACATGCAACAAAATCGATTTTTGAAATAAATTTAGGATTTTGAAAATTTTTAAAGAAATCAAGCACAATAGGCAAAGAAGAGGAACATGAAGTTCACTAATTCGAAAGGCCATGTCTTGAGTTTCTTTGGCAAAATGAGTGAACATCAAAAGAACTGTAAGTTACTTTATATGCTTTGACATGTTTGTTGCGCTTATATTTATTGTGTCGATTTATCTTCTTGATCAATGGTTGAGTTACTTCCTCAGATGCATGCTAGTTATCTAGGAAAACATTGATGCCATAGGCACTTGATAAAGTACTCTCTAGAAGATTGTTTGATATTATTTAACGGGTTTGCAACAAATAATCTGCATCCACTACTGAAAAGGCATAGTAATTGCTCTTGCACATGCTTTAACACCGGTATTCTTCATCTGCCGCACAAGTAACATTTCTGTTTTACATGTCCTACAAGAAACATGTCTGTTTTGCAGCCTTGCTGGGATTGTATCTGTTCATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U330896" ref_strand="+" ref_description="SGN-U330896        Tomato 200607 #1 [2 ESTs aligned]">
      <seq>gtcaatacttgtcctcggggccctgtggaacagggaagtcatcgttttcaaatatcactagttaagttggccctggaagaggctgcgaggattccaaagtccagtggggtgccattctccttgttgattgatgcaatctccaatgtagtaaatgccgagaaaatgaaccatgttactagaagttatgagttgcttgggttcaagaagatatgtagggatgaatttgagaaacggttggttgcaatcgtaggccttactctgttgaagtccacaacgaaaagtttgctgtgcaagatacaatcaaaacccattgaaatggttcagccaaagcaagagccacaaagtgctgacttcaaaggaaatactgccctattccattggctagagccacagaccgagtaactgtgtttatgtggaacaccttctctctgttgtagtgagatcgtttagatggttggatttcctttcctactgtaatgtgatagtaaaagcatctgttcttttgtcctagaatatggattcgtgaagtagttagtttcttttatttgaactggttaaaaacggtttagtttcagctactctttgaagtgaatgcttatgaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0042L06-fdGwD/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0042L06.1" temp_strand="+" temp_description="C06HBa0042L06.1  AC232856.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0042L06 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="148724" stop="151098"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="149024" g_stop="149056" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="33" r_length="33" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="149057" i_stop="149740" i_length="684">
            <donor d_prob="0.924" d_score="0.00"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="149741" g_stop="149905" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="34" r_stop="198" r_length="165" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="149906" i_stop="150015" i_length="110">
            <donor d_prob="0.883" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="150016" g_stop="150111" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="294" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="150112" i_stop="150493" i_length="382">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="150494" g_stop="150798" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="602" r_length="308" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="603" polyA_stop="614"/>
      <MATCH_line gen_id="C06HBa0042L06.1" gen_strand="+" ref_id="SGN-U330896" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>599</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0042L06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U330896" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="149024" e_stop="149056"/>
          <exon e_start="149741" e_stop="149905"/>
          <exon e_start="150016" e_stop="150111"/>
          <exon e_start="150494" e_stop="150798"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAATACTTGTCCTCGGGGCCCTGTGGAACAGGTACCCACAAATACATTTCCGAAGGACTTGGGAAGTTTAGCTACAATATTGTACACTTAGGTTGTTGGGGGGATTTTATTATATGATCTTCATTAAACTATAAGATGGGGGAGTTGTGAGAGACAGTGTTGGACATGCAACAAAATCGATTTTTGAAATAAATTTAGGATTTTGAAAATTTTTAAAGAAATCAAGCACAATAGGCAAAGAAGAGGAACATGAAGTTCACTAATTCGAAAGGCCATGTCTTGAGTTTCTTTGGCAAAATGAGTGAACATCAAAAGAACTGTAAGTTACTTTATATGCTTTGACATGTTTGTTGCGCTTATATTTATTGTGTCGATTTATCTTCTTGATCAATGGTTGAGTTACTTCCTCAGATGCATGCTAGTTATCTAGGAAAACATTGATGCCATAGGCACTTGATAAAGTACTCTCTAGAAGATTGTTTGATATTATTTAACGGGTTTGCAACAAATAATCTGCATCCACTACTGAAAAGGCATAGTAATTGCTCTTGCACATGCTTTAACACCGGTATTCTTCATCTGCCGCACAAGTAACATTTCTGTTTTACATGTCCTACAAGAAACATGTCTGTTTTGCAGCCTTGCTGGAATTGTATCTGTTCATCAATTAACTGCAGATCTTTTTAGGTGACAGTTTTTGTGTTTTCATCTTTAGGGAAGTCATCGTTTTCAAGTATCACTAGTTAAGTTGGCCCTGGAAGAGGCTGCGAGGATTCCAAAGTCCAGTGGGGTGCCATTCTCCTTGTTGATTGATGCAATCTCCAATGTAGTAAATGCCGAGAAAATGAACCATGTTACTAGAAGTTATGAGTTGCTTGGGGTTTGTATATATACAGAATCTTTTCCTCTCATTTTACACCTGAATTTTGTATTTCATCTTGTTGTTCTAATGATTTTCTTCTCTTATGGTTTCTTCTCCGACATTGATAGTTCAAGAAGATATGTAGGGATGAATTTGAGAAACGGTTGGTTGCAATCGTAGGCCTTACTCTGTTGAAGTCCACAACGAAAAGTTTGCTGTGCAAGGTATGTCCTGTGCCTTGTATCTTGAGAATTTGTGAAGTTACATGTCAAGTGACCTCTTGTCTAAATTAAAAGCTGCCTTATATTTATAAGCTGGCTTATATTTATTTTTTAAAGTAAAAATGGATATAAGGGTATTTGCACTATTTTAGATATTCTAATAAATGCATTTTCTCACTCTATATTTTATCCCTCCGCATTAATTAATTACATATTGCATGAGTTACTTACAAGGGCATGAAATTGGTATCCAGTTACCTTGGTTTATGCCGAGATCATCTTTTCTTCTTTGCAAAGTCAAATGAGCCGAAGTGTTCCTTCTTTTACTTTTTTTTAATCTTATCTTATTGTTTGTTTACTTCTTTGTTTTGTTTCTCTTTGGCAGATACAATCAAAACCCATTGAAATGGTTCAGCCAAAGCAAGAGCCACAAAGTGCTGACTTCAAAGGAAATACTGCCCTATTCCATTGGATAGAGCCACAGACCGAGTAACTGTGTTTATGTGGAACACCTTCTCTCTGTTGTAGTGAGATCGTTTAGATGGTTGGATTTCCTTTTCTACTGGAATGTGATAGT---AGCATCTGTTCTTTTGTCCTAGAATATGGATTCGTGAAGTAGTTAGTTTCTTTTATTTGAACTGGTTAAAAACAGTTTAGTTTCAGCTACTCTTTGAAGTGAATGCTTATGAA</genome_strand>
        <mrna_strand>GTCAATACTTGTCCTCGGGGCCCTGTGGAACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAGTCATCGTTTTCAAATATCACTAGTTAAGTTGGCCCTGGAAGAGGCTGCGAGGATTCCAAAGTCCAGTGGGGTGCCATTCTCCTTGTTGATTGATGCAATCTCCAATGTAGTAAATGCCGAGAAAATGAACCATGTTACTAGAAGTTATGAGTTGCTTGGG..............................................................................................................TTCAAGAAGATATGTAGGGATGAATTTGAGAAACGGTTGGTTGCAATCGTAGGCCTTACTCTGTTGAAGTCCACAACGAAAAGTTTGCTGTGCAAG..............................................................................................................................................................................................................................................................................................................................................................................................ATACAATCAAAACCCATTGAAATGGTTCAGCCAAAGCAAGAGCCACAAAGTGCTGACTTCAAAGGAAATACTGCCCTATTCCATTGGCTAGAGCCACAGACCGAGTAACTGTGTTTATGTGGAACACCTTCTCTCTGTTGTAGTGAGATCGTTTAGATGGTTGGATTTCCTTTCCTACTGTAATGTGATAGTAAAAGCATCTGTTCTTTTGTCCTAGAATATGGATTCGTGAAGTAGTTAGTTTCTTTTATTTGAACTGGTTAAAAACGGTTTAGTTTCAGCTACTCTTTGAAGTGAATGCTTATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>17</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="32564" PGL_stop="38957"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="32564" e_stop="32859"/>
            <exon e_start="33250" e_stop="33362"/>
            <exon e_start="33442" e_stop="33526"/>
            <exon e_start="38383" e_stop="38957"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.882" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.980" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="32564" e_stop="32859" e_length="296"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="32860" i_stop="33249" i_length="390"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="33250" e_stop="33362" e_length="113"/>
          </exon>
          <intron i_serial="2" don_prob="0.882" acc_prob="0.986">
            <gDNA_intron_boundary i_start="33363" i_stop="33441" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="33442" e_stop="33526" e_length="85"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.980">
            <gDNA_intron_boundary i_start="33527" i_stop="38382" i_length="4856"/>
          </intron>
          <exon e_serial="4" e_score="0.998">
            <gDNA_exon_boundary e_start="38383" e_stop="38957" e_length="575"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32564" stop="32859"/>
              <exon start="33250" stop="33362"/>
              <exon start="33442" stop="33526"/>
              <exon start="38383" stop="38957"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U319013" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATGATGGTGTGTCGTCTCTCCTGTTGGCTCTTACAATCGAAAGCAAAAAAACCTAAGTCCCAAATAGAGAGCAAAGATGCAGAGATGGTGCTCTAAGCTCCGGTCCCTCGCCGCTCTCCGTTCAACTCCAAATGCCCATCACTACCCTCTTACTCCTCATCGTCTTCTCCACACTGCTACCAATCCCATTATTAACAAACCCTTCACACAGTCAATACTCTCTCCCACCTTTAAACCCCTTTGCCATGGTGGCCCTGTTTCGTTCCCCACTCACTCGTCTCTCCTCCCTCTTTCT : TTCATGCAAGTGCGGTACATCACTGCAAAACAGAGGAAAAGGAAGTTGAAAAGCAGGAAGCCCATGACTCCAATCACATCAAAAGTCAAGAAAATCAAAATGAAATTTTATTC : GTCTTACAAGGACAGATTTCGTGTGATGAAGGATGGCCAGATTAGGCGCTGGAAGGAGGGGAAGAGACATAATGCACATTTAAAG : TCTAAGAAATCAAAACGTCGGCTCAGGCAACCTGCTACGGTCCCTTTGGCTTATGCAAAAGTGATGAAGAAGCTCAGTTTCTGTTGAAGCATTTTTAGTTTGATGCTCTTACTGCCACTCTCACTTGAGTGGCGTTTCTTCTGGTCTTGTTGGTTATCCTCTCGAATCAGTGCAGTGTAGAAGATTTTTTTCAAGGCAAACATATAACATGTTCTGTTCAGGTCTTTTGTGACAAAGCTGCTGTTAGTCTATTTCTTTGGCAAATGGGTATGGAGTTTGATAGTTCTTGTAAGAACAAATAAAAATACAAGAGATGATCTAAGGAGAAAGGTGCAAGGACAAAAAAATTTGTATCAGGTATCCAAGTGAAGAAACAGTCAAGTTCTTTCTTATGAATTAACTTATCTTTATCAAGTCATATGATCTTAATTTGAACCAATCATTTTACTTCTTTTTAGTGATTTGTCAGGAAATGAGATGAATAAACTAGTTTGATTATGTGATTTTTTTTCTTTCATATTTTTAAGTATTTGATGGCTCATTGAAATGCGATTCTAAGAAACATATGGGCACAA</gDNA_template>
            <first_frame> N  D  G  V  S  S  L  L  L  A  L  T  I  E  S  K  K  T  *  V  P  N  R  E  Q  R  C  R  D  G  A  L  S  S  G  P  S  P  L  S  V  Q  L  Q  M  P  I  T  T  L  L  L  L  I  V  F  S  T  L  L  P  I  P  L  L  T  N  P  S  H  S  Q  Y  S  L  P  P  L  N  P  F  A  M  V  A  L  F  R  S  P  L  T  R  L  S  S  L  F  L :   S  C  K  C  G  T  S  L  Q  N  R  G  K  G  S  *  K  A  G  S  P  *  L  Q  S  H  Q  K  S  R  K  S  K  *  N  F  I   : R  L  T  R  T  D  F  V  *  *  R  M  A  R  L  G  A  G  R  R  G  R  D  I  M  H  I  *  S :   L  R  N  Q  N  V  G  S  G  N  L  L  R  S  L  W  L  M  Q  K  *  *  R  S  S  V  S  V  E  A  F  L  V  *  C  S  Y  C  H  S  H  L  S  G  V  S  S  G  L  V  G  Y  P  L  E  S  V  Q  C  R  R  F  F  S  R  Q  T  Y  N  M  F  C  S  G  L  L  *  Q  S  C  C  *  S  I  S  L  A  N  G  Y  G  V  *  *  F  L  *  E  Q  I  K  I  Q  E  M  I  *  G  E  R  C  K  D  K  K  I  C  I  R  Y  P  S  E  E  T  V  K  F  F  L  M  N  *  L  I  F  I  K  S  Y  D  L  N  L  N  Q  S  F  Y  F  F  L  V  I  C  Q  E  M  R  *  I  N  *  F  D  Y  V  I  F  F  L  S  Y  F  *  V  F  D  G  S  L  K  C  D  S  K  K  H  M  G  T  </first_frame>
            <second_frame>  M  M  V  C  R  L  S  C  W  L  L  Q  S  K  A  K  K  P  K  S  Q  I  E  S  K  D  A  E  M  V  L  *  A  P  V  P  R  R  S  P  F  N  S  K  C  P  S  L  P  S  Y  S  S  S  S  S  P  H  C  Y  Q  S  H  Y  *  Q  T  L  H  T  V  N  T  L  S  H  L  *  T  P  L  P  W  W  P  C  F  V  P  H  S  L  V  S  P  P  S  F   : F  H  A  S  A  V  H  H  C  K  T  E  E  K  E  V  E  K  Q  E  A  H  D  S  N  H  I  K  S  Q  E  N  Q  N  E  I  L  F  :  V  L  Q  G  Q  I  S  C  D  E  G  W  P  D  *  A  L  E  G  G  E  E  T  *  C  T  F  K   : V  *  E  I  K  T  S  A  Q  A  T  C  Y  G  P  F  G  L  C  K  S  D  E  E  A  Q  F  L  L  K  H  F  *  F  D  A  L  T  A  T  L  T  *  V  A  F  L  L  V  L  L  V  I  L  S  N  Q  C  S  V  E  D  F  F  Q  G  K  H  I  T  C  S  V  Q  V  F  C  D  K  A  A  V  S  L  F  L  W  Q  M  G  M  E  F  D  S  S  C  K  N  K  *  K  Y  K  R  *  S  K  E  K  G  A  R  T  K  K  F  V  S  G  I  Q  V  K  K  Q  S  S  S  F  L  *  I  N  L  S  L  S  S  H  M  I  L  I  *  T  N  H  F  T  S  F  *  *  F  V  R  K  *  D  E  *  T  S  L  I  M  *  F  F  F  F  H  I  F  K  Y  L  M  A  H  *  N  A  I  L  R  N  I  W  A  Q </second_frame>
            <third_frame>   *  W  C  V  V  S  P  V  G  S  Y  N  R  K  Q  K  N  L  S  P  K  *  R  A  K  M  Q  R  W  C  S  K  L  R  S  L  A  A  L  R  S  T  P  N  A  H  H  Y  P  L  T  P  H  R  L  L  H  T  A  T  N  P  I  I  N  K  P  F  T  Q  S  I  L  S  P  T  F  K  P  L  C  H  G  G  P  V  S  F  P  T  H  S  S  L  L  P  L  S  :  F  M  Q  V  R  Y  I  T  A  K  Q  R  K  R  K  L  K  S  R  K  P  M  T  P  I  T  S  K  V  K  K  I  K  M  K  F  Y  S :   S  Y  K  D  R  F  R  V  M  K  D  G  Q  I  R  R  W  K  E  G  K  R  H  N  A  H  L  K  :  S  K  K  S  K  R  R  L  R  Q  P  A  T  V  P  L  A  Y  A  K  V  M  K  K  L  S  F  C  *  S  I  F  S  L  M  L  L  L  P  L  S  L  E  W  R  F  F  W  S  C  W  L  S  S  R  I  S  A  V  *  K  I  F  F  K  A  N  I  *  H  V  L  F  R  S  F  V  T  K  L  L  L  V  Y  F  F  G  K  W  V  W  S  L  I  V  L  V  R  T  N  K  N  T  R  D  D  L  R  R  K  V  Q  G  Q  K  N  L  Y  Q  V  S  K  *  R  N  S  Q  V  L  S  Y  E  L  T  Y  L  Y  Q  V  I  *  S  *  F  E  P  I  I  L  L  L  F  S  D  L  S  G  N  E  M  N  K  L  V  *  L  C  D  F  F  S  F  I  F  L  S  I  *  W  L  I  E  M  R  F  *  E  T  Y  G  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0042L06.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32632" stop="32859"/>
                    <exon start="33250" stop="33362"/>
                    <exon start="33442" stop="33526"/>
                    <exon start="38383" stop="38469"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>510</number_coding_nucleotides>
                  <number_encoded_amino_acids>170</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RAKMQRWCSKLRSLAALRSTPNAHHYPLTPHRLLHTATNPIINKPFTQSILSPTFKPLCHGGPVSFPTHSSLLPLSFMQVRYITAKQRKRKLKSRKPMTPITSKVKKIKMKFYSSYKDRFRVMKDGQIRRWKEGKRHNAHLKSKKSKRRLRQPATVPLAYAKVMKKLSFC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="62726" PGL_stop="63304"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62726" e_stop="63304"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="62726" e_stop="63304" e_length="579"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62726" stop="63304"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U329897" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGAATCAGGTTCTTGGATGTGACTACAGACGACTTGTACAATTATGAGGGATTGCGACAAAGAAGAAAAAATGCAAAAATAAAGAAGGAAAAAAAATATGGAAATTAAAGAAATAAAGAAGGAAAGAAATAAAGAAGTTAAATTCAAGTCAAATAAGGAAAGAAAAAAAAGGTTACAATTCAAGTCAAATAAGGAAAGAAATAAATATAGACAATTTCAAGAAGGAAAATGATTTGTAATTCCTTTAGTTCCTTGTAGAAGTTGATGAAGGCCAATCAAACTCTATAAAAGGTTTAAGAAGTTGAAGAAAAAAATGTCTTTGCAATAACATAAATCGAGAGAATTTTTCCAGTAAAACAAGAACGATAGCTATTGCAATTCACGAAATATATCTTCGTGAAAGCAATAGTTACTGGAGAAAAGTTGCAGAGCTTCGTCACAGCTTGGTCACAACAACGTAAGGACCAAGATCACGAGTTATGTTCCACTCTGAACTATTGAATATTGAAGTCTGATCAATTAAATTATAGGGTTATTAGTCTCTGTTGATTTGTTCTAGATTTATTATTGAGTTGAAA</gDNA_template>
            <first_frame> V  N  Q  V  L  G  C  D  Y  R  R  L  V  Q  L  *  G  I  A  T  K  K  K  K  C  K  N  K  E  G  K  K  I  W  K  L  K  K  *  R  R  K  E  I  K  K  L  N  S  S  Q  I  R  K  E  K  K  G  Y  N  S  S  Q  I  R  K  E  I  N  I  D  N  F  K  K  E  N  D  L  *  F  L  *  F  L  V  E  V  D  E  G  Q  S  N  S  I  K  G  L  R  S  *  R  K  K  C  L  C  N  N  I  N  R  E  N  F  S  S  K  T  R  T  I  A  I  A  I  H  E  I  Y  L  R  E  S  N  S  Y  W  R  K  V  A  E  L  R  H  S  L  V  T  T  T  *  G  P  R  S  R  V  M  F  H  S  E  L  L  N  I  E  V  *  S  I  K  L  *  G  Y  *  S  L  L  I  C  S  R  F  I  I  E  L  K </first_frame>
            <second_frame>  *  I  R  F  L  D  V  T  T  D  D  L  Y  N  Y  E  G  L  R  Q  R  R  K  N  A  K  I  K  K  E  K  K  Y  G  N  *  R  N  K  E  G  K  K  *  R  S  *  I  Q  V  K  *  G  K  K  K  K  V  T  I  Q  V  K  *  G  K  K  *  I  *  T  I  S  R  R  K  M  I  C  N  S  F  S  S  L  *  K  L  M  K  A  N  Q  T  L  *  K  V  *  E  V  E  E  K  N  V  F  A  I  T  *  I  E  R  I  F  P  V  K  Q  E  R  *  L  L  Q  F  T  K  Y  I  F  V  K  A  I  V  T  G  E  K  L  Q  S  F  V  T  A  W  S  Q  Q  R  K  D  Q  D  H  E  L  C  S  T  L  N  Y  *  I  L  K  S  D  Q  L  N  Y  R  V  I  S  L  C  *  F  V  L  D  L  L  L  S  *   </second_frame>
            <third_frame>   E  S  G  S  W  M  *  L  Q  T  T  C  T  I  M  R  D  C  D  K  E  E  K  M  Q  K  *  R  R  K  K  N  M  E  I  K  E  I  K  K  E  R  N  K  E  V  K  F  K  S  N  K  E  R  K  K  R  L  Q  F  K  S  N  K  E  R  N  K  Y  R  Q  F  Q  E  G  K  *  F  V  I  P  L  V  P  C  R  S  *  *  R  P  I  K  L  Y  K  R  F  K  K  L  K  K  K  M  S  L  Q  *  H  K  S  R  E  F  F  Q  *  N  K  N  D  S  Y  C  N  S  R  N  I  S  S  *  K  Q  *  L  L  E  K  S  C  R  A  S  S  Q  L  G  H  N  N  V  R  T  K  I  T  S  Y  V  P  L  *  T  I  E  Y  *  S  L  I  N  *  I  I  G  L  L  V  S  V  D  L  F  *  I  Y  Y  *  V  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0042L06.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="73232" PGL_stop="72715"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73232" e_stop="72715"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.942"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.942">
            <gDNA_exon_boundary e_start="73232" e_stop="72715" e_length="518"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73232" stop="72715"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U340182" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTCATCATTCTTGTAGCTCATCAAATTAAATCAATGGATATGAATTTAGTTTCATTTATCCTCTTGTTCTCATTCCTTTTTATTATTTTTCGAAAATTGAGAAGAAGCCAAAAACAAAACTTGCCTCCAGGTCCATGGAGACTCCCACTCATTGGGAGTTTGCATCATTTAATTAGTGGACATAATCCACATCGTATTTTTAGAGACCTAGCTCGAAAATACGGCCCCGTAATGTACTTAGAACTCGGAGAAGTTCCTACCGTCATCATATCATCTCCTTCTACGTCCAAACAAGTTTTAAAAACTCATGATCTCGCCTTTGCTAGTAGGCCACAATTTACATCCACTGATATTGTCATGTACAATAATAAAGATATTGCGTTTGCAGAATATGGTGACTACTGGAAACAAATGCGTAAGATTTGCATAATGGAACTTTTAAGTGCCAAGATGGTCAAGTCATTTAGCTCAATTCGTAAGGATGAGCTCTCTAGTGTTCTCTCGTCAATTGATTCT</gDNA_template>
            <first_frame> F  S  S  F  L  *  L  I  K  L  N  Q  W  I  *  I  *  F  H  L  S  S  C  S  H  S  F  L  L  F  F  E  N  *  E  E  A  K  N  K  T  C  L  Q  V  H  G  D  S  H  S  L  G  V  C  I  I  *  L  V  D  I  I  H  I  V  F  L  E  T  *  L  E  N  T  A  P  *  C  T  *  N  S  E  K  F  L  P  S  S  Y  H  L  L  L  R  P  N  K  F  *  K  L  M  I  S  P  L  L  V  G  H  N  L  H  P  L  I  L  S  C  T  I  I  K  I  L  R  L  Q  N  M  V  T  T  G  N  K  C  V  R  F  A  *  W  N  F  *  V  P  R  W  S  S  H  L  A  Q  F  V  R  M  S  S  L  V  F  S  R  Q  L  I   </first_frame>
            <second_frame>  F  H  H  S  C  S  S  S  N  *  I  N  G  Y  E  F  S  F  I  Y  P  L  V  L  I  P  F  Y  Y  F  S  K  I  E  K  K  P  K  T  K  L  A  S  R  S  M  E  T  P  T  H  W  E  F  A  S  F  N  *  W  T  *  S  T  S  Y  F  *  R  P  S  S  K  I  R  P  R  N  V  L  R  T  R  R  S  S  Y  R  H  H  I  I  S  F  Y  V  Q  T  S  F  K  N  S  *  S  R  L  C  *  *  A  T  I  Y  I  H  *  Y  C  H  V  Q  *  *  R  Y  C  V  C  R  I  W  *  L  L  E  T  N  A  *  D  L  H  N  G  T  F  K  C  Q  D  G  Q  V  I  *  L  N  S  *  G  *  A  L  *  C  S  L  V  N  *  F  </second_frame>
            <third_frame>   F  I  I  L  V  A  H  Q  I  K  S  M  D  M  N  L  V  S  F  I  L  L  F  S  F  L  F  I  I  F  R  K  L  R  R  S  Q  K  Q  N  L  P  P  G  P  W  R  L  P  L  I  G  S  L  H  H  L  I  S  G  H  N  P  H  R  I  F  R  D  L  A  R  K  Y  G  P  V  M  Y  L  E  L  G  E  V  P  T  V  I  I  S  S  P  S  T  S  K  Q  V  L  K  T  H  D  L  A  F  A  S  R  P  Q  F  T  S  T  D  I  V  M  Y  N  N  K  D  I  A  F  A  E  Y  G  D  Y  W  K  Q  M  R  K  I  C  I  M  E  L  L  S  A  K  M  V  K  S  F  S  S  I  R  K  D  E  L  S  S  V  L  S  S  I  D  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0042L06.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73230" stop="72715"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>516</number_coding_nucleotides>
                  <number_encoded_amino_acids>172</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FIILVAHQIKSMDMNLVSFILLFSFLFIIFRKLRRSQKQNLPPGPWRLPLIGSLHHLISGHNPHRIFRDLARKYGPVMYLELGEVPTVIISSPSTSKQVLKTHDLAFASRPQFTSTDIVMYNNKDIAFAEYGDYWKQMRKICIMELLSAKMVKSFSSIRKDELSSVLSSIDS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="91416" PGL_stop="92006"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="91416" e_stop="92006"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.949"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.949">
            <gDNA_exon_boundary e_start="91416" e_stop="92006" e_length="591"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91416" stop="92006"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U331909" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTCACTGAGTTTGTATATCGAAGAATTAGTTCTGTTAAGTTGACAAGACGAGTACCATTAGTGGATCGGATTGATGAGAGGAGTCTCGTAATCTCATCTTTCCGAATTGAACTAAATGACTTGACCGTTTTGGTACCTAATAACTCCGTGACACAAATATTACGCATTTGTCTCCATTTATCACCGTATGGTGCAAATGCAATGTCCTTGTAATTATAAGTAGTGATGTCTATGGATGTAAGTTGTGGCTTAGTGGCAAAGGCGAGTTCATGAGTTTTTAGTATTTCTTTCACCATAATAGGGGATGATACGATCACAGCAGGAATTTCTCCGAGTTGTAAATACATAATCGGACCATATTTTGTTGCTAAATTTTTTAGGGTACGATGTGGAAATGATAGTGCACCTCTCAAGTGATGAAGACTACCAATAATGGGAAGTCTCCATGGACCTGGAGGCAATTTTTCTTTTGCCGTTGATGATTTTCTAAGTAATTGAGTAAACAAAAAGGGAAAGAATATAAGTAGTAGTGCAACAAGGTTGTAAGAAGAGGAATAAATGACCTCCATATTTTTTACTAAAATAAGAAAG</gDNA_template>
            <first_frame> V  T  E  F  V  Y  R  R  I  S  S  V  K  L  T  R  R  V  P  L  V  D  R  I  D  E  R  S  L  V  I  S  S  F  R  I  E  L  N  D  L  T  V  L  V  P  N  N  S  V  T  Q  I  L  R  I  C  L  H  L  S  P  Y  G  A  N  A  M  S  L  *  L  *  V  V  M  S  M  D  V  S  C  G  L  V  A  K  A  S  S  *  V  F  S  I  S  F  T  I  I  G  D  D  T  I  T  A  G  I  S  P  S  C  K  Y  I  I  G  P  Y  F  V  A  K  F  F  R  V  R  C  G  N  D  S  A  P  L  K  *  *  R  L  P  I  M  G  S  L  H  G  P  G  G  N  F  S  F  A  V  D  D  F  L  S  N  *  V  N  K  K  G  K  N  I  S  S  S  A  T  R  L  *  E  E  E  *  M  T  S  I  F  F  T  K  I  R  K </first_frame>
            <second_frame>  S  L  S  L  Y  I  E  E  L  V  L  L  S  *  Q  D  E  Y  H  *  W  I  G  L  M  R  G  V  S  *  S  H  L  S  E  L  N  *  M  T  *  P  F  W  Y  L  I  T  P  *  H  K  Y  Y  A  F  V  S  I  Y  H  R  M  V  Q  M  Q  C  P  C  N  Y  K  *  *  C  L  W  M  *  V  V  A  *  W  Q  R  R  V  H  E  F  L  V  F  L  S  P  *  *  G  M  I  R  S  Q  Q  E  F  L  R  V  V  N  T  *  S  D  H  I  L  L  L  N  F  L  G  Y  D  V  E  M  I  V  H  L  S  S  D  E  D  Y  Q  *  W  E  V  S  M  D  L  E  A  I  F  L  L  P  L  M  I  F  *  V  I  E  *  T  K  R  E  R  I  *  V  V  V  Q  Q  G  C  K  K  R  N  K  *  P  P  Y  F  L  L  K  *  E   </second_frame>
            <third_frame>   H  *  V  C  I  S  K  N  *  F  C  *  V  D  K  T  S  T  I  S  G  S  D  *  *  E  E  S  R  N  L  I  F  P  N  *  T  K  *  L  D  R  F  G  T  *  *  L  R  D  T  N  I  T  H  L  S  P  F  I  T  V  W  C  K  C  N  V  L  V  I  I  S  S  D  V  Y  G  C  K  L  W  L  S  G  K  G  E  F  M  S  F  *  Y  F  F  H  H  N  R  G  *  Y  D  H  S  R  N  F  S  E  L  *  I  H  N  R  T  I  F  C  C  *  I  F  *  G  T  M  W  K  *  *  C  T  S  Q  V  M  K  T  T  N  N  G  K  S  P  W  T  W  R  Q  F  F  F  C  R  *  *  F  S  K  *  L  S  K  Q  K  G  K  E  Y  K  *  *  C  N  K  V  V  R  R  G  I  N  D  L  H  I  F  Y  *  N  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0042L06.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91416" stop="91628"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VTEFVYRRISSVKLTRRVPLVDRIDERSLVISSFRIELNDLTVLVPNNSVTQILRICLHLSPYGANAMSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="103786" PGL_stop="104462"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="103786" e_stop="104462"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="103786" e_stop="104462" e_length="677"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103786" stop="104462"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326761" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAAAATATGGAACTCCCAATCCTTGTTATTATCTTCATCTCATTTATCTTGTTCATTATCAAGCCATATATCAATTCTAAACCCAATAAACTACCACCAGGTCCTACTGGTCTCCCAATAATCGGCTCACTCTTAAAACTAGGTACAAAACCTAACCAATCACTAGCCGAGCTAGCCAAAAAACATGGCCCTCTCATGACTCTACAGCTCGGCTCACTCACAACCATAGTAGTCTCCTCAGCCAAAGTAGCCAAAGAGATTCTCCACAAACACGACGAAACTTTCTCAGCACGTATTGTCCCTGTAGCCGTAGCTGCTCAGCCGAACCCTGAAGCCACGTTAGCATGGGTTAACGGCGATCACATGTGGAAAAAAAAGAGAAGGTTTCTAAGTACGCAAATGTTTAATAATCAACGGCTTGATTTGCTTCAAGAACTACGTCACCAAAAAGCGGAACAACTAGTGAGCCATATAAGGAGCCAGTGTGAGAGTGGCTCCGCTGTTGATATTGGACGGGTCGCGTTCGCGACCACGTTGAATTTAATATCGAACACGATATTTTCGATCGATATGGTGGATACGGAATTTAAAACGGCTCATGAGTTTAAGGAATTGGTTTGGACAGTTATGGAAGATGCCGGGGTACCAAATCTATCTGATTTTTTTCCGGTTTTAA</gDNA_template>
            <first_frame> Q  K  Y  G  T  P  N  P  C  Y  Y  L  H  L  I  Y  L  V  H  Y  Q  A  I  Y  Q  F  *  T  Q  *  T  T  T  R  S  Y  W  S  P  N  N  R  L  T  L  K  T  R  Y  K  T  *  P  I  T  S  R  A  S  Q  K  T  W  P  S  H  D  S  T  A  R  L  T  H  N  H  S  S  L  L  S  Q  S  S  Q  R  D  S  P  Q  T  R  R  N  F  L  S  T  Y  C  P  C  S  R  S  C  S  A  E  P  *  S  H  V  S  M  G  *  R  R  S  H  V  E  K  K  E  K  V  S  K  Y  A  N  V  *  *  S  T  A  *  F  A  S  R  T  T  S  P  K  S  G  T  T  S  E  P  Y  K  E  P  V  *  E  W  L  R  C  *  Y  W  T  G  R  V  R  D  H  V  E  F  N  I  E  H  D  I  F  D  R  Y  G  G  Y  G  I  *  N  G  S  *  V  *  G  I  G  L  D  S  Y  G  R  C  R  G  T  K  S  I  *  F  F  S  G  F   </first_frame>
            <second_frame>  K  N  M  E  L  P  I  L  V  I  I  F  I  S  F  I  L  F  I  I  K  P  Y  I  N  S  K  P  N  K  L  P  P  G  P  T  G  L  P  I  I  G  S  L  L  K  L  G  T  K  P  N  Q  S  L  A  E  L  A  K  K  H  G  P  L  M  T  L  Q  L  G  S  L  T  T  I  V  V  S  S  A  K  V  A  K  E  I  L  H  K  H  D  E  T  F  S  A  R  I  V  P  V  A  V  A  A  Q  P  N  P  E  A  T  L  A  W  V  N  G  D  H  M  W  K  K  K  R  R  F  L  S  T  Q  M  F  N  N  Q  R  L  D  L  L  Q  E  L  R  H  Q  K  A  E  Q  L  V  S  H  I  R  S  Q  C  E  S  G  S  A  V  D  I  G  R  V  A  F  A  T  T  L  N  L  I  S  N  T  I  F  S  I  D  M  V  D  T  E  F  K  T  A  H  E  F  K  E  L  V  W  T  V  M  E  D  A  G  V  P  N  L  S  D  F  F  P  V  L  </second_frame>
            <third_frame>   K  I  W  N  S  Q  S  L  L  L  S  S  S  H  L  S  C  S  L  S  S  H  I  S  I  L  N  P  I  N  Y  H  Q  V  L  L  V  S  Q  *  S  A  H  S  *  N  *  V  Q  N  L  T  N  H  *  P  S  *  P  K  N  M  A  L  S  *  L  Y  S  S  A  H  S  Q  P  *  *  S  P  Q  P  K  *  P  K  R  F  S  T  N  T  T  K  L  S  Q  H  V  L  S  L  *  P  *  L  L  S  R  T  L  K  P  R  *  H  G  L  T  A  I  T  C  G  K  K  R  E  G  F  *  V  R  K  C  L  I  I  N  G  L  I  C  F  K  N  Y  V  T  K  K  R  N  N  *  *  A  I  *  G  A  S  V  R  V  A  P  L  L  I  L  D  G  S  R  S  R  P  R  *  I  *  Y  R  T  R  Y  F  R  S  I  W  W  I  R  N  L  K  R  L  M  S  L  R  N  W  F  G  Q  L  W  K  M  P  G  Y  Q  I  Y  L  I  F  F  R  F  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0042L06.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="103787" stop="104461"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>675</number_coding_nucleotides>
                  <number_encoded_amino_acids>225</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KNMELPILVIIFISFILFIIKPYINSKPNKLPPGPTGLPIIGSLLKLGTKPNQSLAELAKKHGPLMTLQLGSLTTIVVSSAKVAKEILHKHDETFSARIVPVAVAAQPNPEATLAWVNGDHMWKKKRRFLSTQMFNNQRLDLLQELRHQKAEQLVSHIRSQCESGSAVDIGRVAFATTLNLISNTIFSIDMVDTEFKTAHEFKELVWTVMEDAGVPNLSDFFPVL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="105720" PGL_stop="107678"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="105720" e_stop="106349"/>
            <exon e_start="107652" e_stop="107678"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.986"/>
          <exon-only e_score="0.889"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.986">
            <gDNA_exon_boundary e_start="105720" e_stop="106349" e_length="630"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="106350" i_stop="107651" i_length="1302"/>
          </intron>
          <exon e_serial="2" e_score="0.889">
            <gDNA_exon_boundary e_start="107652" e_stop="107678" e_length="27"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105720" stop="106349"/>
              <exon start="107652" stop="107678"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U344642" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAACCTGAAGAACTCAACAAAGTACGACAAGAAATAATGGAACAAATAGGTCTAGAAAGAGCAGTTAAAGAATCAGACATGGACAAACTCCCATATCTTCAAGCAGTTGTAAAAGAAACGATGAGACTTCACCCCGCAGTTCCATTACTATTACCGCACAAAGCACAAAATGACATACAAGTGTTGGGCTTCAACGTGCCTAAATACAGTCAAGTTTTCGTGAATGCATGGGCAATCGGAAGAGATCCCAAGTCGTGGGAAAGGGCACTAGAGTTTTTGCCTCAAAGATTCATCGAATCTAACGTGGATTATAAAGGTAGGGATTTTGAGTTTATTCCATTTGGCGCGGGGAGGAGGATTTGTCCTGGAATACCGCTGGCTATAAGAATGGTGAATTTAATGTTGGCTTCTGTTATTCAACCATTTAAATGGAAGTTACCTGATGGAATGGCTCCGGAGGAATTGAACATGGAGGAACAATTTGGAGTAAGTTTGAGGAAGGCTGTTCCTCTTGTTGCAGTTCCTAGTATGGAAGAAAAATAATCTTCTTTTAATTTATTCCTGATTTAATTTTAATTTGCAATTGTTCTTCTTTACCTTGTTAATGTGATTGTGCGAAGTGTATTTAT : ATTAAAAAAAAAAAAGAAAAAAATAAA</gDNA_template>
            <first_frame> K  T  *  R  T  Q  Q  S  T  T  R  N  N  G  T  N  R  S  R  K  S  S  *  R  I  R  H  G  Q  T  P  I  S  S  S  S  C  K  R  N  D  E  T  S  P  R  S  S  I  T  I  T  A  Q  S  T  K  *  H  T  S  V  G  L  Q  R  A  *  I  Q  S  S  F  R  E  C  M  G  N  R  K  R  S  Q  V  V  G  K  G  T  R  V  F  A  S  K  I  H  R  I  *  R  G  L  *  R  *  G  F  *  V  Y  S  I  W  R  G  E  E  D  L  S  W  N  T  A  G  Y  K  N  G  E  F  N  V  G  F  C  Y  S  T  I  *  M  E  V  T  *  W  N  G  S  G  G  I  E  H  G  G  T  I  W  S  K  F  E  E  G  C  S  S  C  C  S  S  *  Y  G  R  K  I  I  F  F  *  F  I  P  D  L  I  L  I  C  N  C  S  S  L  P  C  *  C  D  C  A  K  C  I  Y  :  I  K  K  K  K  E  K  N  K </first_frame>
            <second_frame>  K  P  E  E  L  N  K  V  R  Q  E  I  M  E  Q  I  G  L  E  R  A  V  K  E  S  D  M  D  K  L  P  Y  L  Q  A  V  V  K  E  T  M  R  L  H  P  A  V  P  L  L  L  P  H  K  A  Q  N  D  I  Q  V  L  G  F  N  V  P  K  Y  S  Q  V  F  V  N  A  W  A  I  G  R  D  P  K  S  W  E  R  A  L  E  F  L  P  Q  R  F  I  E  S  N  V  D  Y  K  G  R  D  F  E  F  I  P  F  G  A  G  R  R  I  C  P  G  I  P  L  A  I  R  M  V  N  L  M  L  A  S  V  I  Q  P  F  K  W  K  L  P  D  G  M  A  P  E  E  L  N  M  E  E  Q  F  G  V  S  L  R  K  A  V  P  L  V  A  V  P  S  M  E  E  K  *  S  S  F  N  L  F  L  I  *  F  *  F  A  I  V  L  L  Y  L  V  N  V  I  V  R  S  V  F  I :   L  K  K  K  K  K  K  I   </second_frame>
            <third_frame>   N  L  K  N  S  T  K  Y  D  K  K  *  W  N  K  *  V  *  K  E  Q  L  K  N  Q  T  W  T  N  S  H  I  F  K  Q  L  *  K  K  R  *  D  F  T  P  Q  F  H  Y  Y  Y  R  T  K  H  K  M  T  Y  K  C  W  A  S  T  C  L  N  T  V  K  F  S  *  M  H  G  Q  S  E  E  I  P  S  R  G  K  G  H  *  S  F  C  L  K  D  S  S  N  L  T  W  I  I  K  V  G  I  L  S  L  F  H  L  A  R  G  G  G  F  V  L  E  Y  R  W  L  *  E  W  *  I  *  C  W  L  L  L  F  N  H  L  N  G  S  Y  L  M  E  W  L  R  R  N  *  T  W  R  N  N  L  E  *  V  *  G  R  L  F  L  L  L  Q  F  L  V  W  K  K  N  N  L  L  L  I  Y  S  *  F  N  F  N  L  Q  L  F  F  F  T  L  L  M  *  L  C  E  V  Y  L   : Y  *  K  K  K  R  K  K  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0042L06.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="105721" stop="106263"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>540</number_coding_nucleotides>
                  <number_encoded_amino_acids>180</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KPEELNKVRQEIMEQIGLERAVKESDMDKLPYLQAVVKETMRLHPAVPLLLPHKAQNDIQVLGFNVPKYSQVFVNAWAIGRDPKSWERALEFLPQRFIESNVDYKGRDFEFIPFGAGRRICPGIPLAIRMVNLMLASVIQPFKWKLPDGMAPEELNMEEQFGVSLRKAVPLVAVPSMEEK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="116354" PGL_stop="115473"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="116354" e_stop="116198"/>
            <exon e_start="116130" e_stop="115473"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.915" acc_prob="0.993" e_score="0.994"/>
          <exon-only e_score="0.973"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="116354" e_stop="116198" e_length="157"/>
          </exon>
          <intron i_serial="1" don_prob="0.915" acc_prob="0.993">
            <gDNA_intron_boundary i_start="116197" i_stop="116131" i_length="67"/>
          </intron>
          <exon e_serial="2" e_score="0.973">
            <gDNA_exon_boundary e_start="116130" e_stop="115473" e_length="658"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116354" stop="116198"/>
              <exon start="116130" stop="115473"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U329088" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGGCCAGCGTATTTAAGGTTGCATGAAATATTTGAAGAAAACATTGAGAAAAGAGTAAAAGGGATGACGATGAAGAGAGACGGAGATTTTTTGGATGTACTACTTGATCACTGTAAAGATGAAAATGATCGCAAAACTATAAAGCCGATAATCCTT : GATTTATTCATTGCTGGAAGTGACACATCGGCCATAACAATAGAATGGGCAATGGCAGAACTTCTTCGAAAACCTGAAGAACTCAACAAAGTAGGACAAGAAATAATGGAACAAATAGGGCTAGAAAGGGCAGTTAAAGAATCAGACATGGACAAACTCCCATACCTTCAAGCAGTTGTAAAAGAAACGATGAGACTTCATCCAGCAACTCCATTACTCTTACCTCACAAAGCCCAACACGACGTACAAGTGTTGGGATTTACCGTGCCCAAAGACAGTCAAGTTTTAGTGAATGCTTGGGCCATTGGAAGAGATCCCAAGTCATGGGAAAGGCCGCTAGAGTTTCTGCCTGGAAGATTCATGGAATCTAGTGTGGATTATAAAGGTAGAGATTTTGAGTTTATACCATTTGGCGCGGGCAGGAGAATATGTCCAGGTATGCCGCTGGCTATAAGAATGGTGAATTTGATATTGGCTTCTATTATACAACCATTTAATTGGAAGTTACCAGATGGAATGACACCAGAAAAATTGGACATGGAGGAACAGTTTGGAGTTACTTTAAAGAAGGCTATTCCTCTTATTGCAATACCTAGTATCACTACATCAAACCATTGAGTAATGACAACAACTTAATTATCGCTATATATATATATAT</gDNA_template>
            <first_frame> K  A  S  V  F  K  V  A  *  N  I  *  R  K  H  *  E  K  S  K  R  D  D  D  E  E  R  R  R  F  F  G  C  T  T  *  S  L  *  R  *  K  *  S  Q  N  Y  K  A  D  N  P   : *  F  I  H  C  W  K  *  H  I  G  H  N  N  R  M  G  N  G  R  T  S  S  K  T  *  R  T  Q  Q  S  R  T  R  N  N  G  T  N  R  A  R  K  G  S  *  R  I  R  H  G  Q  T  P  I  P  S  S  S  C  K  R  N  D  E  T  S  S  S  N  S  I  T  L  T  S  Q  S  P  T  R  R  T  S  V  G  I  Y  R  A  Q  R  Q  S  S  F  S  E  C  L  G  H  W  K  R  S  Q  V  M  G  K  A  A  R  V  S  A  W  K  I  H  G  I  *  C  G  L  *  R  *  R  F  *  V  Y  T  I  W  R  G  Q  E  N  M  S  R  Y  A  A  G  Y  K  N  G  E  F  D  I  G  F  Y  Y  T  T  I  *  L  E  V  T  R  W  N  D  T  R  K  I  G  H  G  G  T  V  W  S  Y  F  K  E  G  Y  S  S  Y  C  N  T  *  Y  H  Y  I  K  P  L  S  N  D  N  N  L  I  I  A  I  Y  I  Y   </first_frame>
            <second_frame>  R  P  A  Y  L  R  L  H  E  I  F  E  E  N  I  E  K  R  V  K  G  M  T  M  K  R  D  G  D  F  L  D  V  L  L  D  H  C  K  D  E  N  D  R  K  T  I  K  P  I  I  L  :  D  L  F  I  A  G  S  D  T  S  A  I  T  I  E  W  A  M  A  E  L  L  R  K  P  E  E  L  N  K  V  G  Q  E  I  M  E  Q  I  G  L  E  R  A  V  K  E  S  D  M  D  K  L  P  Y  L  Q  A  V  V  K  E  T  M  R  L  H  P  A  T  P  L  L  L  P  H  K  A  Q  H  D  V  Q  V  L  G  F  T  V  P  K  D  S  Q  V  L  V  N  A  W  A  I  G  R  D  P  K  S  W  E  R  P  L  E  F  L  P  G  R  F  M  E  S  S  V  D  Y  K  G  R  D  F  E  F  I  P  F  G  A  G  R  R  I  C  P  G  M  P  L  A  I  R  M  V  N  L  I  L  A  S  I  I  Q  P  F  N  W  K  L  P  D  G  M  T  P  E  K  L  D  M  E  E  Q  F  G  V  T  L  K  K  A  I  P  L  I  A  I  P  S  I  T  T  S  N  H  *  V  M  T  T  T  *  L  S  L  Y  I  Y  I  </second_frame>
            <third_frame>   G  Q  R  I  *  G  C  M  K  Y  L  K  K  T  L  R  K  E  *  K  G  *  R  *  R  E  T  E  I  F  W  M  Y  Y  L  I  T  V  K  M  K  M  I  A  K  L  *  S  R  *  S  L :   I  Y  S  L  L  E  V  T  H  R  P  *  Q  *  N  G  Q  W  Q  N  F  F  E  N  L  K  N  S  T  K  *  D  K  K  *  W  N  K  *  G  *  K  G  Q  L  K  N  Q  T  W  T  N  S  H  T  F  K  Q  L  *  K  K  R  *  D  F  I  Q  Q  L  H  Y  S  Y  L  T  K  P  N  T  T  Y  K  C  W  D  L  P  C  P  K  T  V  K  F  *  *  M  L  G  P  L  E  E  I  P  S  H  G  K  G  R  *  S  F  C  L  E  D  S  W  N  L  V  W  I  I  K  V  E  I  L  S  L  Y  H  L  A  R  A  G  E  Y  V  Q  V  C  R  W  L  *  E  W  *  I  *  Y  W  L  L  L  Y  N  H  L  I  G  S  Y  Q  M  E  *  H  Q  K  N  W  T  W  R  N  S  L  E  L  L  *  R  R  L  F  L  L  L  Q  Y  L  V  S  L  H  Q  T  I  E  *  *  Q  Q  L  N  Y  R  Y  I  Y  I  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0042L06.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="116353" stop="116198"/>
                    <exon start="116130" stop="115513"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>771</number_coding_nucleotides>
                  <number_encoded_amino_acids>257</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RPAYLRLHEIFEENIEKRVKGMTMKRDGDFLDVLLDHCKDENDRKTIKPIILDLFIAGSDTSAITIEWAMAELLRKPEELNKVGQEIMEQIGLERAVKESDMDKLPYLQAVVKETMRLHPATPLLLPHKAQHDVQVLGFTVPKDSQVLVNAWAIGRDPKSWERPLEFLPGRFMESSVDYKGRDFEFIPFGAGRRICPGMPLAIRMVNLILASIIQPFNWKLPDGMTPEKLDMEEQFGVTLKKAIPLIAIPSITTSNH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="122269" PGL_stop="120763"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="122269" e_stop="121810"/>
            <exon e_start="121035" e_stop="120763"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.117" acc_prob="0.980" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="122269" e_stop="121810" e_length="460"/>
          </exon>
          <intron i_serial="1" don_prob="0.117" acc_prob="0.980">
            <gDNA_intron_boundary i_start="121809" i_stop="121036" i_length="774"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="121035" e_stop="120763" e_length="273"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="122269" stop="121810"/>
              <exon start="121035" stop="120763"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U324337" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGAGGATTGCATTGTTTGAGGATGCAGTGGATGCCTGGATTCAGATTGCTTGTCCGAGGTTGTCAATTGATTGGGGAGATGCATTTAAAAAGCCTTTGCTAACACCATTTGAGGCGGAGATTGCATTGGGTGATTTGTCTGGATGGTGGGAGAGGACGACATCAAAGAATTCAGATATATGTCGTGATGAAGTAATGAAGTGTTCAAAGAATGAGTCTTGTGGTGCTTGTGATAAGAGTGGTGAGGAAGTGAAGGAAGAGACACAAGTAGATTATCCAATGGATTATTATGCTCAGGATGGTGGGGAGTGGAATTCTTGCTACTCCAAGAAGCCTGCTAGACTTTCACAAAGAAATAGCCAATCTTGTAATGGTGCCACTGCCATCAAATCTAATAGCTGAGCTAACTTGTTCCAGCTGGACATATTACTGCCATCGTAAATGGAGTTTACACTTCTGCA : GGTGGAATGGAAAAAGGGTGATGCTAAGGCTGTAAAAGTATGGAGAAACCACCTGCTACCTTTTGATCACGGGCGTAATTTATTTAGCCTAGAAAAGGATTTTCAAATAAATCTGGGTATTCACCGAGGTGCTATTAAAGGGAAGGCTGGAAAGTTCGCAAATGTAATGCATGTGGTATCTTGCTTAGATTTTCAAAGTTGATAGCTCTTTTTGTCTTAGCGTCATTGTTAAAAACTTTTAAGGTTTGATGAAATATGATTCTGTTAATTTGT</gDNA_template>
            <first_frame> R  G  L  H  C  L  R  M  Q  W  M  P  G  F  R  L  L  V  R  G  C  Q  L  I  G  E  M  H  L  K  S  L  C  *  H  H  L  R  R  R  L  H  W  V  I  C  L  D  G  G  R  G  R  H  Q  R  I  Q  I  Y  V  V  M  K  *  *  S  V  Q  R  M  S  L  V  V  L  V  I  R  V  V  R  K  *  R  K  R  H  K  *  I  I  Q  W  I  I  M  L  R  M  V  G  S  G  I  L  A  T  P  R  S  L  L  D  F  H  K  E  I  A  N  L  V  M  V  P  L  P  S  N  L  I  A  E  L  T  C  S  S  W  T  Y  Y  C  H  R  K  W  S  L  H  F  C   : R  W  N  G  K  R  V  M  L  R  L  *  K  Y  G  E  T  T  C  Y  L  L  I  T  G  V  I  Y  L  A  *  K  R  I  F  K  *  I  W  V  F  T  E  V  L  L  K  G  R  L  E  S  S  Q  M  *  C  M  W  Y  L  A  *  I  F  K  V  D  S  S  F  C  L  S  V  I  V  K  N  F  *  G  L  M  K  Y  D  S  V  N  L  </first_frame>
            <second_frame>  E  D  C  I  V  *  G  C  S  G  C  L  D  S  D  C  L  S  E  V  V  N  *  L  G  R  C  I  *  K  A  F  A  N  T  I  *  G  G  D  C  I  G  *  F  V  W  M  V  G  E  D  D  I  K  E  F  R  Y  M  S  *  *  S  N  E  V  F  K  E  *  V  L  W  C  L  *  *  E  W  *  G  S  E  G  R  D  T  S  R  L  S  N  G  L  L  C  S  G  W  W  G  V  E  F  L  L  L  Q  E  A  C  *  T  F  T  K  K  *  P  I  L  *  W  C  H  C  H  Q  I  *  *  L  S  *  L  V  P  A  G  H  I  T  A  I  V  N  G  V  Y  T  S  A  :  G  G  M  E  K  G  *  C  *  G  C  K  S  M  E  K  P  P  A  T  F  *  S  R  A  *  F  I  *  P  R  K  G  F  S  N  K  S  G  Y  S  P  R  C  Y  *  R  E  G  W  K  V  R  K  C  N  A  C  G  I  L  L  R  F  S  K  L  I  A  L  F  V  L  A  S  L  L  K  T  F  K  V  *  *  N  M  I  L  L  I  C </second_frame>
            <third_frame>   R  I  A  L  F  E  D  A  V  D  A  W  I  Q  I  A  C  P  R  L  S  I  D  W  G  D  A  F  K  K  P  L  L  T  P  F  E  A  E  I  A  L  G  D  L  S  G  W  W  E  R  T  T  S  K  N  S  D  I  C  R  D  E  V  M  K  C  S  K  N  E  S  C  G  A  C  D  K  S  G  E  E  V  K  E  E  T  Q  V  D  Y  P  M  D  Y  Y  A  Q  D  G  G  E  W  N  S  C  Y  S  K  K  P  A  R  L  S  Q  R  N  S  Q  S  C  N  G  A  T  A  I  K  S  N  S  *  A  N  L  F  Q  L  D  I  L  L  P  S  *  M  E  F  T  L  L  Q :   V  E  W  K  K  G  D  A  K  A  V  K  V  W  R  N  H  L  L  P  F  D  H  G  R  N  L  F  S  L  E  K  D  F  Q  I  N  L  G  I  H  R  G  A  I  K  G  K  A  G  K  F  A  N  V  M  H  V  V  S  C  L  D  F  Q  S  *  *  L  F  L  S  *  R  H  C  *  K  L  L  R  F  D  E  I  *  F  C  *  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0042L06.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="122267" stop="121869"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>396</number_coding_nucleotides>
                  <number_encoded_amino_acids>132</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RIALFEDAVDAWIQIACPRLSIDWGDAFKKPLLTPFEAEIALGDLSGWWERTTSKNSDICRDEVMKCSKNESCGACDKSGEEVKEETQVDYPMDYYAQDGGEWNSCYSKKPARLSQRNSQSCNGATAIKSNS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0042L06.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="121829" stop="121810"/>
                    <exon start="121035" stop="120834"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MEFTLLQVEWKKGDAKAVKVWRNHLLPFDHGRNLFSLEKDFQINLGIHRGAIKGKAGKFANVMHVVSCLDFQS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="123325" PGL_stop="122284"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="123325" e_stop="122284"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="123325" e_stop="122284" e_length="1042"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="123325" stop="122284"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U321613" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAACTATGGAGAAAGAACACGGCGGCCTTCTCCCACTGAACCCTACTCCGGCGGCGGCGGCGTCAGCGACGACCGCAGTTGACGCTGGAGATCAGCAGTCACTGCAGCAGTCAACCCGGCCGCGTCCGAAGAGGTTCGTGAAGAACCAAATACCAGACTCCATCCTAAACGATGCAGCACTCAACGCCGCCATATCACTTTTACCTCAAAACTACAACTTCGAAATCCACAAGTGTGTATGGCGAGTGCGAACTTCAAGTGCCAAGCGTGTGGCCCTGCAGTTCCCTGAGGGTCTCCTCATGTACTCACTCATCATCTCCGATATACTCTCCACATTCACTTCCGCCACTCACTGTTTCATCCTCGGCGACGTGACTTTCGGCGCGTGTTGCGTTGACGACCTCTCGGCGGGAGCGCTTTCCGCTGATCTCCTCATTCATTTCGGCCATAGCTGCCTCGTGCCTATTGATTCCACCACTATCCCATGCCTTTATATATTCGTCGAAATCTCAATCGATGTTCACAGGTTGTTGAATGAACTCAAACTCAATTTTTATAATTCCGATACGTATGACAATATCATTATGGCTGGGACAATTCAATTTGCTTCTGCAATTCGGGCGGTTAAGCCCGAACTTGAAAAATTGGGGTTTAGTATTTTGATTCCTCAAGCTAAACCGTTATCAGCTGGGGAGGTACTCGGCTGTACTGCCCCGAGTGTTAAGAACAGATTTTCTGATGGAGAGAATGTAGTTTTGATATTTGTGGCTGACGGTAGGTTTCATTTGGAGGCGTTTATGATAGCGAATCCGGGGATAAAGACTTACAGATATGATCCGTTTATAGGGAAGTTGTTTGTGGAGGAGTATGATCATAAGGGAATGAAGGAGGAGAGGAAGAGAGCGATTGAAAAAGCCAGGGGGGCGAAGAATTGGGGGATAGTGCTTGGGACATTAGGTAGGCAAGGGAATCCAAGGATATTGGATAGGTTAGAGAAGAAAATGTCCGAAAAGGGGATGACTTGGACAGTTGTGTTGATGTC</gDNA_template>
            <first_frame> K  L  W  R  K  N  T  A  A  F  S  H  *  T  L  L  R  R  R  R  R  Q  R  R  P  Q  L  T  L  E  I  S  S  H  C  S  S  Q  P  G  R  V  R  R  G  S  *  R  T  K  Y  Q  T  P  S  *  T  M  Q  H  S  T  P  P  Y  H  F  Y  L  K  T  T  T  S  K  S  T  S  V  Y  G  E  C  E  L  Q  V  P  S  V  W  P  C  S  S  L  R  V  S  S  C  T  H  S  S  S  P  I  Y  S  P  H  S  L  P  P  L  T  V  S  S  S  A  T  *  L  S  A  R  V  A  L  T  T  S  R  R  E  R  F  P  L  I  S  S  F  I  S  A  I  A  A  S  C  L  L  I  P  P  L  S  H  A  F  I  Y  S  S  K  S  Q  S  M  F  T  G  C  *  M  N  S  N  S  I  F  I  I  P  I  R  M  T  I  S  L  W  L  G  Q  F  N  L  L  L  Q  F  G  R  L  S  P  N  L  K  N  W  G  L  V  F  *  F  L  K  L  N  R  Y  Q  L  G  R  Y  S  A  V  L  P  R  V  L  R  T  D  F  L  M  E  R  M  *  F  *  Y  L  W  L  T  V  G  F  I  W  R  R  L  *  *  R  I  R  G  *  R  L  T  D  M  I  R  L  *  G  S  C  L  W  R  S  M  I  I  R  E  *  R  R  R  G  R  E  R  L  K  K  P  G  G  R  R  I  G  G  *  C  L  G  H  *  V  G  K  G  I  Q  G  Y  W  I  G  *  R  R  K  C  P  K  R  G  *  L  G  Q  L  C  *  C  </first_frame>
            <second_frame>  N  Y  G  E  R  T  R  R  P  S  P  T  E  P  Y  S  G  G  G  G  V  S  D  D  R  S  *  R  W  R  S  A  V  T  A  A  V  N  P  A  A  S  E  E  V  R  E  E  P  N  T  R  L  H  P  K  R  C  S  T  Q  R  R  H  I  T  F  T  S  K  L  Q  L  R  N  P  Q  V  C  M  A  S  A  N  F  K  C  Q  A  C  G  P  A  V  P  *  G  S  P  H  V  L  T  H  H  L  R  Y  T  L  H  I  H  F  R  H  S  L  F  H  P  R  R  R  D  F  R  R  V  L  R  *  R  P  L  G  G  S  A  F  R  *  S  P  H  S  F  R  P  *  L  P  R  A  Y  *  F  H  H  Y  P  M  P  L  Y  I  R  R  N  L  N  R  C  S  Q  V  V  E  *  T  Q  T  Q  F  L  *  F  R  Y  V  *  Q  Y  H  Y  G  W  D  N  S  I  C  F  C  N  S  G  G  *  A  R  T  *  K  I  G  V  *  Y  F  D  S  S  S  *  T  V  I  S  W  G  G  T  R  L  Y  C  P  E  C  *  E  Q  I  F  *  W  R  E  C  S  F  D  I  C  G  *  R  *  V  S  F  G  G  V  Y  D  S  E  S  G  D  K  D  L  Q  I  *  S  V  Y  R  E  V  V  C  G  G  V  *  S  *  G  N  E  G  G  E  E  E  S  D  *  K  S  Q  G  G  E  E  L  G  D  S  A  W  D  I  R  *  A  R  E  S  K  D  I  G  *  V  R  E  E  N  V  R  K  G  D  D  L  D  S  C  V  D  V </second_frame>
            <third_frame>   T  M  E  K  E  H  G  G  L  L  P  L  N  P  T  P  A  A  A  A  S  A  T  T  A  V  D  A  G  D  Q  Q  S  L  Q  Q  S  T  R  P  R  P  K  R  F  V  K  N  Q  I  P  D  S  I  L  N  D  A  A  L  N  A  A  I  S  L  L  P  Q  N  Y  N  F  E  I  H  K  C  V  W  R  V  R  T  S  S  A  K  R  V  A  L  Q  F  P  E  G  L  L  M  Y  S  L  I  I  S  D  I  L  S  T  F  T  S  A  T  H  C  F  I  L  G  D  V  T  F  G  A  C  C  V  D  D  L  S  A  G  A  L  S  A  D  L  L  I  H  F  G  H  S  C  L  V  P  I  D  S  T  T  I  P  C  L  Y  I  F  V  E  I  S  I  D  V  H  R  L  L  N  E  L  K  L  N  F  Y  N  S  D  T  Y  D  N  I  I  M  A  G  T  I  Q  F  A  S  A  I  R  A  V  K  P  E  L  E  K  L  G  F  S  I  L  I  P  Q  A  K  P  L  S  A  G  E  V  L  G  C  T  A  P  S  V  K  N  R  F  S  D  G  E  N  V  V  L  I  F  V  A  D  G  R  F  H  L  E  A  F  M  I  A  N  P  G  I  K  T  Y  R  Y  D  P  F  I  G  K  L  F  V  E  E  Y  D  H  K  G  M  K  E  E  R  K  R  A  I  E  K  A  R  G  A  K  N  W  G  I  V  L  G  T  L  G  R  Q  G  N  P  R  I  L  D  R  L  E  K  K  M  S  E  K  G  M  T  W  T  V  V  L  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0042L06.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="123323" stop="122286"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1038</number_coding_nucleotides>
                  <number_encoded_amino_acids>346</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TMEKEHGGLLPLNPTPAAAASATTAVDAGDQQSLQQSTRPRPKRFVKNQIPDSILNDAALNAAISLLPQNYNFEIHKCVWRVRTSSAKRVALQFPEGLLMYSLIISDILSTFTSATHCFILGDVTFGACCVDDLSAGALSADLLIHFGHSCLVPIDSTTIPCLYIFVEISIDVHRLLNELKLNFYNSDTYDNIIMAGTIQFASAIRAVKPELEKLGFSILIPQAKPLSAGEVLGCTAPSVKNRFSDGENVVLIFVADGRFHLEAFMIANPGIKTYRYDPFIGKLFVEEYDHKGMKEERKRAIEKARGAKNWGIVLGTLGRQGNPRILDRLEKKMSEKGMTWTVVLM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="124652" PGL_stop="124014"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="124652" e_stop="124595"/>
            <exon e_start="124484" e_stop="124014"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.960" acc_prob="0.981" e_score="0.966"/>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.966">
            <gDNA_exon_boundary e_start="124652" e_stop="124595" e_length="58"/>
          </exon>
          <intron i_serial="1" don_prob="0.960" acc_prob="0.981">
            <gDNA_intron_boundary i_start="124594" i_stop="124485" i_length="110"/>
          </intron>
          <exon e_serial="2" e_score="0.985">
            <gDNA_exon_boundary e_start="124484" e_stop="124014" e_length="471"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="124652" stop="124595"/>
              <exon start="124484" stop="124014"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345322" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGCGATGCTTGGAATCAGGTATTATATGCGCAAAATGGGAGAGGCTGCAGGAATTCCG : ATAGAACCTGAATCACAAACTCACCTTCTGGATACAACGATGAGTATGGAGGGGGTTCTGTTGGCTGGTGTTCCTGGTGCTGGTGGTTTTGATGCGGTCTTTGCTGTCACTTTGGGGGCTTCAAGCAAAAATGTGACAAAAACTTGGAGTTCACTCAATGTTCTTGCTATGCTAGTTACGGAAGATCCCCGCGGTGTATCTTTGGAAGAGCATGATCCTCGAGCAAAGGAAATTACTGCAGCTGTTTCTTCAATCCAACTTCAATAATGATCTGCATGTATAGGATATTATATCCAATGGATATATTATGACTTCAACATCAGATTTTACAACACAAAAAGGATATATTAGAGCTCTGAATTGTAACGTCAGAATCACTTTCATCAATAAGCACCTAATGAGAGCCTGTTGTATTTTTACCCAAAACTTTGATCTTGTTAGAATTAGTTCCATTTTACTTCAGAACTCTGT</gDNA_template>
            <first_frame> C  D  A  W  N  Q  V  L  Y  A  Q  N  G  R  G  C  R  N  S   : D  R  T  *  I  T  N  S  P  S  G  Y  N  D  E  Y  G  G  G  S  V  G  W  C  S  W  C  W  W  F  *  C  G  L  C  C  H  F  G  G  F  K  Q  K  C  D  K  N  L  E  F  T  Q  C  S  C  Y  A  S  Y  G  R  S  P  R  C  I  F  G  R  A  *  S  S  S  K  G  N  Y  C  S  C  F  F  N  P  T  S  I  M  I  C  M  Y  R  I  L  Y  P  M  D  I  L  *  L  Q  H  Q  I  L  Q  H  K  K  D  I  L  E  L  *  I  V  T  S  E  S  L  S  S  I  S  T  *  *  E  P  V  V  F  L  P  K  T  L  I  L  L  E  L  V  P  F  Y  F  R  T  L  </first_frame>
            <second_frame>  A  M  L  G  I  R  Y  Y  M  R  K  M  G  E  A  A  G  I  P  :  I  E  P  E  S  Q  T  H  L  L  D  T  T  M  S  M  E  G  V  L  L  A  G  V  P  G  A  G  G  F  D  A  V  F  A  V  T  L  G  A  S  S  K  N  V  T  K  T  W  S  S  L  N  V  L  A  M  L  V  T  E  D  P  R  G  V  S  L  E  E  H  D  P  R  A  K  E  I  T  A  A  V  S  S  I  Q  L  Q  *  *  S  A  C  I  G  Y  Y  I  Q  W  I  Y  Y  D  F  N  I  R  F  Y  N  T  K  R  I  Y  *  S  S  E  L  *  R  Q  N  H  F  H  Q  *  A  P  N  E  S  L  L  Y  F  Y  P  K  L  *  S  C  *  N  *  F  H  F  T  S  E  L  C </second_frame>
            <third_frame>   R  C  L  E  S  G  I  I  C  A  K  W  E  R  L  Q  E  F  R :   *  N  L  N  H  K  L  T  F  W  I  Q  R  *  V  W  R  G  F  C  W  L  V  F  L  V  L  V  V  L  M  R  S  L  L  S  L  W  G  L  Q  A  K  M  *  Q  K  L  G  V  H  S  M  F  L  L  C  *  L  R  K  I  P  A  V  Y  L  W  K  S  M  I  L  E  Q  R  K  L  L  Q  L  F  L  Q  S  N  F  N  N  D  L  H  V  *  D  I  I  S  N  G  Y  I  M  T  S  T  S  D  F  T  T  Q  K  G  Y  I  R  A  L  N  C  N  V  R  I  T  F  I  N  K  H  L  M  R  A  C  C  I  F  T  Q  N  F  D  L  V  R  I  S  S  I  L  L  Q  N  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0042L06.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="124651" stop="124595"/>
                    <exon start="124484" stop="124218"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>321</number_coding_nucleotides>
                  <number_encoded_amino_acids>107</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AMLGIRYYMRKMGEAAGIPIEPESQTHLLDTTMSMEGVLLAGVPGAGGFDAVFAVTLGASSKNVTKTWSSLNVLAMLVTEDPRGVSLEEHDPRAKEITAAVSSIQLQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="138550" PGL_stop="132648"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="138550" e_stop="138288"/>
            <exon e_start="137614" e_stop="137086"/>
            <exon e_start="136827" e_stop="136708"/>
            <exon e_start="136496" e_stop="136276"/>
            <exon e_start="136177" e_stop="136048"/>
            <exon e_start="135943" e_stop="135881"/>
            <exon e_start="135796" e_stop="135719"/>
            <exon e_start="135199" e_stop="135108"/>
            <exon e_start="135015" e_stop="134950"/>
            <exon e_start="134835" e_stop="134682"/>
            <exon e_start="134107" e_stop="133456"/>
            <exon e_start="132680" e_stop="132648"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.905" acc_prob="0.999" e_score="0.992"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.736" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.616" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.866" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.947" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.798" e_score="1.000"/>
          <exon-only e_score="0.545"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="138550" e_stop="138288" e_length="263"/>
          </exon>
          <intron i_serial="1" don_prob="0.905" acc_prob="0.999">
            <gDNA_intron_boundary i_start="138287" i_stop="137615" i_length="673"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="137614" e_stop="137086" e_length="529"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="137085" i_stop="136828" i_length="258"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="136827" e_stop="136708" e_length="120"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="136707" i_stop="136497" i_length="211"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="136496" e_stop="136276" e_length="221"/>
          </exon>
          <intron i_serial="4" don_prob="0.736" acc_prob="0.978">
            <gDNA_intron_boundary i_start="136275" i_stop="136178" i_length="98"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="136177" e_stop="136048" e_length="130"/>
          </exon>
          <intron i_serial="5" don_prob="0.990" acc_prob="0.991">
            <gDNA_intron_boundary i_start="136047" i_stop="135944" i_length="104"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="135943" e_stop="135881" e_length="63"/>
          </exon>
          <intron i_serial="6" don_prob="0.616" acc_prob="0.983">
            <gDNA_intron_boundary i_start="135880" i_stop="135797" i_length="84"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="135796" e_stop="135719" e_length="78"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.992">
            <gDNA_intron_boundary i_start="135718" i_stop="135200" i_length="519"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="135199" e_stop="135108" e_length="92"/>
          </exon>
          <intron i_serial="8" don_prob="0.866" acc_prob="1.000">
            <gDNA_intron_boundary i_start="135107" i_stop="135016" i_length="92"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="135015" e_stop="134950" e_length="66"/>
          </exon>
          <intron i_serial="9" don_prob="0.995" acc_prob="0.947">
            <gDNA_intron_boundary i_start="134949" i_stop="134836" i_length="114"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="134835" e_stop="134682" e_length="154"/>
          </exon>
          <intron i_serial="10" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="134681" i_stop="134108" i_length="574"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="134107" e_stop="133456" e_length="652"/>
          </exon>
          <intron i_serial="11" don_prob="0.000" acc_prob="0.798">
            <gDNA_intron_boundary i_start="133455" i_stop="132681" i_length="775"/>
          </intron>
          <exon e_serial="12" e_score="0.545">
            <gDNA_exon_boundary e_start="132680" e_stop="132648" e_length="33"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138550" stop="138288"/>
              <exon start="137614" stop="137086"/>
              <exon start="136827" stop="136708"/>
              <exon start="136496" stop="136276"/>
              <exon start="136177" stop="136048"/>
              <exon start="135943" stop="135881"/>
              <exon start="135796" stop="135719"/>
              <exon start="135199" stop="135108"/>
              <exon start="135015" stop="134950"/>
              <exon start="134835" stop="134682"/>
              <exon start="134107" stop="133456"/>
              <exon start="132680" stop="132648"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315731" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACAAGTGTAGGCATATCTGGTCACAATAAATAAGGCAATCACAAAATGAAGTTAGAAATTTGACCGCGTTGATTGCTGCCTTCACAAGTAGAGTAAACAAAGTCCGAAAACCTCCATCGTTTCATAGCCTATAGAATTTGATTGAGCTACCCCTACTTCACAAATCATCTATATATATAATCTACTTTTCCAGACATACCCATCTAACTATCTTTTTCTCTCTGCGCCGTTGTAGCGTTCAAGATGAGTTACAACAACGATCC : GTACATAGATGAGGATGGAGAGGCATTGGTGGATTTTGATGAGGATGTCCGATCAGATAACGAGCAACAGGAACAATTTCTTGGTGACAATCTGGACGATGATGATGCATGGAATCAGAGACAGCGAGAGCGGTCACCGACCCCAGTATATGATGATCTTAACAAGTCTAAGCCCAGGAAGCGGTTAATTAAGAAATCTTCAGCTAGAGAAAACACACCGGATATTGGGCTAGGAGATGAGGAGGATGCTTATGGTGGTGCTGCTGCTGATGACATGACTGGCAATATGCATGATGAGTTTGACGGCGGTGGTCCTTCATCTTCCTCTGCTGGTGGTGGAAAGAGGAAGAGGTTTGGCATGGAGTTTAGTGAAGAGAAGAGGAAGGAGAAGAAGGGGAGAGAGAAAGGAGAGAAGAAATTTAAGTTGAGGAAAAATGGGGGTTACTCTGGAGGAAGCAGGTTAAAGGACCAGGAGGGGGATCGGGAGATGAAGGAGATGTGGGACACCATTGCTGGTGGTGACTCTGAG : GATGACCAAGAAGGTCCAAAGAATGCCGATGATGATAACTTCATTGATGATAGTGGTGTAGATCCAGCTGACAGGTATGGAAGCGACAATGAACCACTGTCTCCCAGCAATGCTCCACAG : GCTGAAGAAGGGGAAGAGGATGACGAAATCAAGCAGCTCTTCAAGGGAGGCAAGAAGAAAAAGAAAACTGAAAAGAGTGCAGCAGAAATTGCATTGCTAGTAGAGAATGTTATGGCTGAGTTGGAAGTTGTTGCCGAGGAGGATGCCGAACTGAATAGACATTCCAAACCTGCTATAAATAAACTAAAAAAACTCCCTCTTCTCATAGATGTCCTGTCTAA : GAAGCAACTTCAGCAAGAATTTTTAGATCATGGAGTGTTGACTCTTTTGAGGACTTGGCTTGAACCCCTTCCAGATGGAAGCCTGCCCAACATAAACATTCGTGCTGCGATCCTAAAGATCCTTACTGAT : TATCCAATTGATCTTGAGCAGTATGATAGAAGAGAGATGTTGAAAAAGAGTGGTCTTGGAAAG : GTTATTATGTTCCTCTCGAAATCAGATGAGGAGACTACATCTAACAGGAAACTTGCCAAGGATTTGGTTGACAAATGG : AGTCGACCAATATTCAACAAGAGTACACGGTTTGAAGACATGAGAAATCTAGAGGATGAGAGAGCTGCTCAATACAGGCGGCCCTTGAAAAA : ACCCATGAATAAAGCATCAGGAATGGAATCCAGAGACGATGACCTTGACTTGGCTGGATATTCACA : AGGGCAAAAATCTGGTCAGTCATCTGGTAGGCAACTTACATCAAGGCCTGAAGCAATGTCAATGGATTTTGTGGTGCGTCCACAGTCTAAGATTGATCCTGACGAAGTTAGGGCCAGGGCTAGAGCAATGGTTCAAGACCAGCGCCGAATGAAG : ATGAATAAGAAACTGCAGCAGTTAAAAGCTCCCAAAAAGAAGAAACTCCAAGCCACAAAACTGAGTGTGGAGGGTCGTGGCATGGTGAAGTACCTCTAGGCTGTGTTTATTGTGCTTGCCCTTGTTAGGGTAAATAGCCTGTTGGCTCTGCTACACAAGGATGGGTGTTCTTCTGAGCTTCGTATCTGGACAGTGGCTAATCAAAGTGCCTTGTGAATGTGGGATCATTTTTGAAATTAGTTTGAGGGCTTCTAGTATGTTATGCTGATGATCAGTCGTCATTGATTAAATGGTGCCGCATGTTATCTACTTATATTATTCCTTCCTTAGCAGCTTTCTGAGGATGGCTTCTTCCTTATAACATGTTGGTGTGTCGCTGATACCCATTAATTTTGGTTCCCTAATAAGTTTCCAAGTCATTGGTGTAATGGAAGTCATGGCTGTTGCTATGGGTGATGCGCAACTTGGAATACTATATTATTGCCGTTTGGCATGTATTATGCTGTTTTCCTGAAGCTCTTTAGCTAGGTTTTCTACCCTTTCATTTGCTTGTTTAGTATTATTAGCTTGTGAGTTGAGACAAAGATCTTATTCTTCTCCAGAAGGCAAATTGTACTTTTTCCTGTTTTAGACTAAACAAAGTATTTCTCAA : GTAAAACTTATATTTGATATATTAGAGAAAAGA</gDNA_template>
            <first_frame> T  S  V  G  I  S  G  H  N  K  *  G  N  H  K  M  K  L  E  I  *  P  R  *  L  L  P  S  Q  V  E  *  T  K  S  E  N  L  H  R  F  I  A  Y  R  I  *  L  S  Y  P  Y  F  T  N  H  L  Y  I  *  S  T  F  P  D  I  P  I  *  L  S  F  S  L  C  A  V  V  A  F  K  M  S  Y  N  N  D  P :   Y  I  D  E  D  G  E  A  L  V  D  F  D  E  D  V  R  S  D  N  E  Q  Q  E  Q  F  L  G  D  N  L  D  D  D  D  A  W  N  Q  R  Q  R  E  R  S  P  T  P  V  Y  D  D  L  N  K  S  K  P  R  K  R  L  I  K  K  S  S  A  R  E  N  T  P  D  I  G  L  G  D  E  E  D  A  Y  G  G  A  A  A  D  D  M  T  G  N  M  H  D  E  F  D  G  G  G  P  S  S  S  S  A  G  G  G  K  R  K  R  F  G  M  E  F  S  E  E  K  R  K  E  K  K  G  R  E  K  G  E  K  K  F  K  L  R  K  N  G  G  Y  S  G  G  S  R  L  K  D  Q  E  G  D  R  E  M  K  E  M  W  D  T  I  A  G  G  D  S  E  :  D  D  Q  E  G  P  K  N  A  D  D  D  N  F  I  D  D  S  G  V  D  P  A  D  R  Y  G  S  D  N  E  P  L  S  P  S  N  A  P  Q  :  A  E  E  G  E  E  D  D  E  I  K  Q  L  F  K  G  G  K  K  K  K  K  T  E  K  S  A  A  E  I  A  L  L  V  E  N  V  M  A  E  L  E  V  V  A  E  E  D  A  E  L  N  R  H  S  K  P  A  I  N  K  L  K  K  L  P  L  L  I  D  V  L  S  K :   K  Q  L  Q  Q  E  F  L  D  H  G  V  L  T  L  L  R  T  W  L  E  P  L  P  D  G  S  L  P  N  I  N  I  R  A  A  I  L  K  I  L  T  D  :  Y  P  I  D  L  E  Q  Y  D  R  R  E  M  L  K  K  S  G  L  G  K  :  V  I  M  F  L  S  K  S  D  E  E  T  T  S  N  R  K  L  A  K  D  L  V  D  K  W  :  S  R  P  I  F  N  K  S  T  R  F  E  D  M  R  N  L  E  D  E  R  A  A  Q  Y  R  R  P  L  K  K :   P  M  N  K  A  S  G  M  E  S  R  D  D  D  L  D  L  A  G  Y  S  Q :   G  Q  K  S  G  Q  S  S  G  R  Q  L  T  S  R  P  E  A  M  S  M  D  F  V  V  R  P  Q  S  K  I  D  P  D  E  V  R  A  R  A  R  A  M  V  Q  D  Q  R  R  M  K  :  M  N  K  K  L  Q  Q  L  K  A  P  K  K  K  K  L  Q  A  T  K  L  S  V  E  G  R  G  M  V  K  Y  L  *  A  V  F  I  V  L  A  L  V  R  V  N  S  L  L  A  L  L  H  K  D  G  C  S  S  E  L  R  I  W  T  V  A  N  Q  S  A  L  *  M  W  D  H  F  *  N  *  F  E  G  F  *  Y  V  M  L  M  I  S  R  H  *  L  N  G  A  A  C  Y  L  L  I  L  F  L  P  *  Q  L  S  E  D  G  F  F  L  I  T  C  W  C  V  A  D  T  H  *  F  W  F  P  N  K  F  P  S  H  W  C  N  G  S  H  G  C  C  Y  G  *  C  A  T  W  N  T  I  L  L  P  F  G  M  Y  Y  A  V  F  L  K  L  F  S  *  V  F  Y  P  F  I  C  L  F  S  I  I  S  L  *  V  E  T  K  I  L  F  F  S  R  R  Q  I  V  L  F  P  V  L  D  *  T  K  Y  F  S   : S  K  T  Y  I  *  Y  I  R  E  K  </first_frame>
            <second_frame>  Q  V  *  A  Y  L  V  T  I  N  K  A  I  T  K  *  S  *  K  F  D  R  V  D  C  C  L  H  K  *  S  K  Q  S  P  K  T  S  I  V  S  *  P  I  E  F  D  *  A  T  P  T  S  Q  I  I  Y  I  Y  N  L  L  F  Q  T  Y  P  S  N  Y  L  F  L  S  A  P  L  *  R  S  R  *  V  T  T  T  I   : R  T  *  M  R  M  E  R  H  W  W  I  L  M  R  M  S  D  Q  I  T  S  N  R  N  N  F  L  V  T  I  W  T  M  M  M  H  G  I  R  D  S  E  S  G  H  R  P  Q  Y  M  M  I  L  T  S  L  S  P  G  S  G  *  L  R  N  L  Q  L  E  K  T  H  R  I  L  G  *  E  M  R  R  M  L  M  V  V  L  L  L  M  T  *  L  A  I  C  M  M  S  L  T  A  V  V  L  H  L  P  L  L  V  V  E  R  G  R  G  L  A  W  S  L  V  K  R  R  G  R  R  R  R  G  E  R  K  E  R  R  N  L  S  *  G  K  M  G  V  T  L  E  E  A  G  *  R  T  R  R  G  I  G  R  *  R  R  C  G  T  P  L  L  V  V  T  L  R :   M  T  K  K  V  Q  R  M  P  M  M  I  T  S  L  M  I  V  V  *  I  Q  L  T  G  M  E  A  T  M  N  H  C  L  P  A  M  L  H  R :   L  K  K  G  K  R  M  T  K  S  S  S  S  S  R  E  A  R  R  K  R  K  L  K  R  V  Q  Q  K  L  H  C  *  *  R  M  L  W  L  S  W  K  L  L  P  R  R  M  P  N  *  I  D  I  P  N  L  L  *  I  N  *  K  N  S  L  F  S  *  M  S  C  L   : R  S  N  F  S  K  N  F  *  I  M  E  C  *  L  F  *  G  L  G  L  N  P  F  Q  M  E  A  C  P  T  *  T  F  V  L  R  S  *  R  S  L  L  I :   I  Q  L  I  L  S  S  M  I  E  E  R  C  *  K  R  V  V  L  E  R :   L  L  C  S  S  R  N  Q  M  R  R  L  H  L  T  G  N  L  P  R  I  W  L  T  N  G :   V  D  Q  Y  S  T  R  V  H  G  L  K  T  *  E  I  *  R  M  R  E  L  L  N  T  G  G  P  *  K   : N  P  *  I  K  H  Q  E  W  N  P  E  T  M  T  L  T  W  L  D  I  H   : K  G  K  N  L  V  S  H  L  V  G  N  L  H  Q  G  L  K  Q  C  Q  W  I  L  W  C  V  H  S  L  R  L  I  L  T  K  L  G  P  G  L  E  Q  W  F  K  T  S  A  E  *  R :   *  I  R  N  C  S  S  *  K  L  P  K  R  R  N  S  K  P  Q  N  *  V  W  R  V  V  A  W  *  S  T  S  R  L  C  L  L  C  L  P  L  L  G  *  I  A  C  W  L  C  Y  T  R  M  G  V  L  L  S  F  V  S  G  Q  W  L  I  K  V  P  C  E  C  G  I  I  F  E  I  S  L  R  A  S  S  M  L  C  *  *  S  V  V  I  D  *  M  V  P  H  V  I  Y  L  Y  Y  S  F  L  S  S  F  L  R  M  A  S  S  L  *  H  V  G  V  S  L  I  P  I  N  F  G  S  L  I  S  F  Q  V  I  G  V  M  E  V  M  A  V  A  M  G  D  A  Q  L  G  I  L  Y  Y  C  R  L  A  C  I  M  L  F  S  *  S  S  L  A  R  F  S  T  L  S  F  A  C  L  V  L  L  A  C  E  L  R  Q  R  S  Y  S  S  P  E  G  K  L  Y  F  F  L  F  *  T  K  Q  S  I  S  Q  :  V  K  L  I  F  D  I  L  E  K  R </second_frame>
            <third_frame>   K  C  R  H  I  W  S  Q  *  I  R  Q  S  Q  N  E  V  R  N  L  T  A  L  I  A  A  F  T  S  R  V  N  K  V  R  K  P  P  S  F  H  S  L  *  N  L  I  E  L  P  L  L  H  K  S  S  I  Y  I  I  Y  F  S  R  H  T  H  L  T  I  F  F  S  L  R  R  C  S  V  Q  D  E  L  Q  Q  R  S  :  V  H  R  *  G  W  R  G  I  G  G  F  *  *  G  C  P  I  R  *  R  A  T  G  T  I  S  W  *  Q  S  G  R  *  *  C  M  E  S  E  T  A  R  A  V  T  D  P  S  I  *  *  S  *  Q  V  *  A  Q  E  A  V  N  *  E  I  F  S  *  R  K  H  T  G  Y  W  A  R  R  *  G  G  C  L  W  W  C  C  C  *  *  H  D  W  Q  Y  A  *  *  V  *  R  R  W  S  F  I  F  L  C  W  W  W  K  E  E  E  V  W  H  G  V  *  *  R  E  E  E  G  E  E  G  E  R  E  R  R  E  E  I  *  V  E  E  K  W  G  L  L  W  R  K  Q  V  K  G  P  G  G  G  S  G  D  E  G  D  V  G  H  H  C  W  W  *  L  *   : G  *  P  R  R  S  K  E  C  R  *  *  *  L  H  *  *  *  W  C  R  S  S  *  Q  V  W  K  R  Q  *  T  T  V  S  Q  Q  C  S  T   : G  *  R  R  G  R  G  *  R  N  Q  A  A  L  Q  G  R  Q  E  E  K  E  N  *  K  E  C  S  R  N  C  I  A  S  R  E  C  Y  G  *  V  G  S  C  C  R  G  G  C  R  T  E  *  T  F  Q  T  C  Y  K  *  T  K  K  T  P  S  S  H  R  C  P  V  *  :  E  A  T  S  A  R  I  F  R  S  W  S  V  D  S  F  E  D  L  A  *  T  P  S  R  W  K  P  A  Q  H  K  H  S  C  C  D  P  K  D  P  Y  *   : L  S  N  *  S  *  A  V  *  *  K  R  D  V  E  K  E  W  S  W  K   : G  Y  Y  V  P  L  E  I  R  *  G  D  Y  I  *  Q  E  T  C  Q  G  F  G  *  Q  M   : E  S  T  N  I  Q  Q  E  Y  T  V  *  R  H  E  K  S  R  G  *  E  S  C  S  I  Q  A  A  L  E  K  :  T  H  E  *  S  I  R  N  G  I  Q  R  R  *  P  *  L  G  W  I  F  T  :  R  A  K  I  W  S  V  I  W  *  A  T  Y  I  K  A  *  S  N  V  N  G  F  C  G  A  S  T  V  *  D  *  S  *  R  S  *  G  Q  G  *  S  N  G  S  R  P  A  P  N  E   : D  E  *  E  T  A  A  V  K  S  S  Q  K  E  E  T  P  S  H  K  T  E  C  G  G  S  W  H  G  E  V  P  L  G  C  V  Y  C  A  C  P  C  *  G  K  *  P  V  G  S  A  T  Q  G  W  V  F  F  *  A  S  Y  L  D  S  G  *  S  K  C  L  V  N  V  G  S  F  L  K  L  V  *  G  L  L  V  C  Y  A  D  D  Q  S  S  L  I  K  W  C  R  M  L  S  T  Y  I  I  P  S  L  A  A  F  *  G  W  L  L  P  Y  N  M  L  V  C  R  *  Y  P  L  I  L  V  P  *  *  V  S  K  S  L  V  *  W  K  S  W  L  L  L  W  V  M  R  N  L  E  Y  Y  I  I  A  V  W  H  V  L  C  C  F  P  E  A  L  *  L  G  F  L  P  F  H  L  L  V  *  Y  Y  *  L  V  S  *  D  K  D  L  I  L  L  Q  K  A  N  C  T  F  S  C  F  R  L  N  K  V  F  L  K :   *  N  L  Y  L  I  Y  *  R  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0042L06.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="138343" stop="138288"/>
                    <exon start="137614" stop="137086"/>
                    <exon start="136827" stop="136708"/>
                    <exon start="136496" stop="136276"/>
                    <exon start="136177" stop="136048"/>
                    <exon start="135943" stop="135881"/>
                    <exon start="135796" stop="135719"/>
                    <exon start="135199" stop="135108"/>
                    <exon start="135015" stop="134950"/>
                    <exon start="134835" stop="134682"/>
                    <exon start="134107" stop="134009"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1605</number_coding_nucleotides>
                  <number_encoded_amino_acids>535</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSFSLCAVVAFKMSYNNDPYIDEDGEALVDFDEDVRSDNEQQEQFLGDNLDDDDAWNQRQRERSPTPVYDDLNKSKPRKRLIKKSSARENTPDIGLGDEEDAYGGAAADDMTGNMHDEFDGGGPSSSSAGGGKRKRFGMEFSEEKRKEKKGREKGEKKFKLRKNGGYSGGSRLKDQEGDREMKEMWDTIAGGDSEDDQEGPKNADDDNFIDDSGVDPADRYGSDNEPLSPSNAPQAEEGEEDDEIKQLFKGGKKKKKTEKSAAEIALLVENVMAELEVVAEEDAELNRHSKPAINKLKKLPLLIDVLSKKQLQQEFLDHGVLTLLRTWLEPLPDGSLPNINIRAAILKILTDYPIDLEQYDRREMLKKSGLGKVIMFLSKSDEETTSNRKLAKDLVDKWSRPIFNKSTRFEDMRNLEDERAAQYRRPLKKPMNKASGMESRDDDLDLAGYSQGQKSGQSSGRQLTSRPEAMSMDFVVRPQSKIDPDEVRARARAMVQDQRRMKMNKKLQQLKAPKKKKLQATKLSVEGRGMVKYL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="133530" e_stop="133454"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.909"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.909">
            <gDNA_exon_boundary e_start="133530" e_stop="133454" e_length="77"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133530" stop="133454"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U342748" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGACAAAGATCTTATTCTTCTCCAGAAGGCAAATTGTACTTTTTCCTGTTTTAGACTAAACAAAGTATTTCTCAAGT</gDNA_template>
            <first_frame> R  Q  R  S  Y  S  S  P  E  G  K  L  Y  F  F  L  F  *  T  K  Q  S  I  S  Q   </first_frame>
            <second_frame>  D  K  D  L  I  L  L  Q  K  A  N  C  T  F  S  C  F  R  L  N  K  V  F  L  K  </second_frame>
            <third_frame>   T  K  I  L  F  F  S  R  R  Q  I  V  L  F  P  V  L  D  *  T  K  Y  F  S  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0042L06.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="145634" PGL_stop="147516"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="145700" e_stop="145946"/>
            <exon e_start="146346" e_stop="147516"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.789" acc_prob="0.989" e_score="0.992"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="145700" e_stop="145946" e_length="247"/>
          </exon>
          <intron i_serial="1" don_prob="0.789" acc_prob="0.989">
            <gDNA_intron_boundary i_start="145947" i_stop="146345" i_length="399"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="146346" e_stop="147516" e_length="1171"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="145700" stop="145946"/>
              <exon start="146346" stop="146694"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326732" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="146618" stop="147516"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U327939" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAAATTGTTGTTTCTTTTCCAATTATGTATTGCATTGTAGTGCAGAAGTTTGAATTCAGACATTTATTTATGAATTATGCATTTGCTTTTGATTTGGAAACTGACAAAATTTACATTTCAGAGGAAGCCAATTAGATTATATCTGTTAGTTTAGCATTGTGCAAAAGGTAAGAATTTGTTGACTTGACACCGACTTTATGGAGAAAATTGACTTGTACAGCAATCGCCGTGCAGTGCAGAAGGCG : GTTTTGCATTTTCTTCAATATGATGTAGCTTCCCGGAAATTTATCACAGATGGTTTTTACTATTAGTATTTAGCCTTTTTTTGGTACTTGTAAATAGATAGTTATATCTGTAGATAAAATGGAACCAAAGGGGGTTGGATTTTTAGATAGTGGCCGTAGGACTGTGGTTGGAGAAAAGAGTAAAGTGGTTACTCAGAATTTGGCACATCTGCTTAGAGCCAGCAGTGAGAAAATATCAATTCAATCCAACTGTGATAGAAAGCTTGAGAAGAGGAAAAGGATCGTTCACTGCGAGTCTAATAGTCAATCACATCTCAGGATATCTGAACACAAGAACTACCTGAACTTTAAGAGAAGCAGACTGCCGCTACGTGTACTGTTTTATCAGAACGGTGAATGGACCGACTTCCCTCAAGATATTATTCCTATAGTTAAAGAAGATTTTCGGGCGAAAAAGACTGTTATTGAGGTGAAAGTTTGTGACTTTCATATAATTCTTGATATTCTACATATGGTTCAAATAGATGTAATAAATGGTTTACAGAAACCTATTGCCTGGATAGATGAAGTAGGTAGGTGTTTCTTCCCTGAGTCTTATCTTATCAGTAGTGAAATGCTTGGGAATTTTGAAACCCTGTCAAAGAGAACTGAAGAGTTTATGACAACTGAGCCAGATAGGATAACTGATATGAAGTTGCAACTCGACACTGACTTAAATGGACTGGATAATCGCAATTTGGAAGAAGATGTGGAAGAGTCAAATATTGGTTACAAGAGGAATAAAGTATGTCCTCTTAAAGACAGTCAAGAAGTTGCTGATTATAAAAAATCAGATGCAAAAATTGCACAAGTTGCAGAAAATAAACAGAACCAAGAAACACCGTCTCCTGACTTAGAAGCTAGCCTGAAATTTGTGAATGCAGAATCTGTCAAAAATATGTTTATTATGGGAATGAATGTTAACCCTAACAAGTGTGAGATCAAAATTAACAAATGCTCTAGTAATTATTTGACAACTCGCTTAGAACTCTTTGAGAAGCAGGTTGAAATAACGCAAAAATATCGTGGAAACTCAAATGTTCGATATGCATGGCTTGCCGCTTCTAAAGATTTGATATCTACAATTATGAAGTACGGCCTTGCACCTGGAGGATCTAAGTATAGGCCTAAA</gDNA_template>
            <first_frame> K  K  L  L  F  L  F  Q  L  C  I  A  L  *  C  R  S  L  N  S  D  I  Y  L  *  I  M  H  L  L  L  I  W  K  L  T  K  F  T  F  Q  R  K  P  I  R  L  Y  L  L  V  *  H  C  A  K  G  K  N  L  L  T  *  H  R  L  Y  G  E  N  *  L  V  Q  Q  S  P  C  S  A  E  G   : G  F  A  F  S  S  I  *  C  S  F  P  E  I  Y  H  R  W  F  L  L  L  V  F  S  L  F  L  V  L  V  N  R  *  L  Y  L  *  I  K  W  N  Q  R  G  L  D  F  *  I  V  A  V  G  L  W  L  E  K  R  V  K  W  L  L  R  I  W  H  I  C  L  E  P  A  V  R  K  Y  Q  F  N  P  T  V  I  E  S  L  R  R  G  K  G  S  F  T  A  S  L  I  V  N  H  I  S  G  Y  L  N  T  R  T  T  *  T  L  R  E  A  D  C  R  Y  V  Y  C  F  I  R  T  V  N  G  P  T  S  L  K  I  L  F  L  *  L  K  K  I  F  G  R  K  R  L  L  L  R  *  K  F  V  T  F  I  *  F  L  I  F  Y  I  W  F  K  *  M  *  *  M  V  Y  R  N  L  L  P  G  *  M  K  *  V  G  V  S  S  L  S  L  I  L  S  V  V  K  C  L  G  I  L  K  P  C  Q  R  E  L  K  S  L  *  Q  L  S  Q  I  G  *  L  I  *  S  C  N  S  T  L  T  *  M  D  W  I  I  A  I  W  K  K  M  W  K  S  Q  I  L  V  T  R  G  I  K  Y  V  L  L  K  T  V  K  K  L  L  I  I  K  N  Q  M  Q  K  L  H  K  L  Q  K  I  N  R  T  K  K  H  R  L  L  T  *  K  L  A  *  N  L  *  M  Q  N  L  S  K  I  C  L  L  W  E  *  M  L  T  L  T  S  V  R  S  K  L  T  N  A  L  V  I  I  *  Q  L  A  *  N  S  L  R  S  R  L  K  *  R  K  N  I  V  E  T  Q  M  F  D  M  H  G  L  P  L  L  K  I  *  Y  L  Q  L  *  S  T  A  L  H  L  E  D  L  S  I  G  L   </first_frame>
            <second_frame>  K  N  C  C  F  F  S  N  Y  V  L  H  C  S  A  E  V  *  I  Q  T  F  I  Y  E  L  C  I  C  F  *  F  G  N  *  Q  N  L  H  F  R  G  S  Q  L  D  Y  I  C  *  F  S  I  V  Q  K  V  R  I  C  *  L  D  T  D  F  M  E  K  I  D  L  Y  S  N  R  R  A  V  Q  K  A  :  V  L  H  F  L  Q  Y  D  V  A  S  R  K  F  I  T  D  G  F  Y  Y  *  Y  L  A  F  F  W  Y  L  *  I  D  S  Y  I  C  R  *  N  G  T  K  G  G  W  I  F  R  *  W  P  *  D  C  G  W  R  K  E  *  S  G  Y  S  E  F  G  T  S  A  *  S  Q  Q  *  E  N  I  N  S  I  Q  L  *  *  K  A  *  E  E  E  K  D  R  S  L  R  V  *  *  S  I  T  S  Q  D  I  *  T  Q  E  L  P  E  L  *  E  K  Q  T  A  A  T  C  T  V  L  S  E  R  *  M  D  R  L  P  S  R  Y  Y  S  Y  S  *  R  R  F  S  G  E  K  D  C  Y  *  G  E  S  L  *  L  S  Y  N  S  *  Y  S  T  Y  G  S  N  R  C  N  K  W  F  T  E  T  Y  C  L  D  R  *  S  R  *  V  F  L  P  *  V  L  S  Y  Q  *  *  N  A  W  E  F  *  N  P  V  K  E  N  *  R  V  Y  D  N  *  A  R  *  D  N  *  Y  E  V  A  T  R  H  *  L  K  W  T  G  *  S  Q  F  G  R  R  C  G  R  V  K  Y  W  L  Q  E  E  *  S  M  S  S  *  R  Q  S  R  S  C  *  L  *  K  I  R  C  K  N  C  T  S  C  R  K  *  T  E  P  R  N  T  V  S  *  L  R  S  *  P  E  I  C  E  C  R  I  C  Q  K  Y  V  Y  Y  G  N  E  C  *  P  *  Q  V  *  D  Q  N  *  Q  M  L  *  *  L  F  D  N  S  L  R  T  L  *  E  A  G  *  N  N  A  K  I  S  W  K  L  K  C  S  I  C  M  A  C  R  F  *  R  F  D  I  Y  N  Y  E  V  R  P  C  T  W  R  I  *  V  *  A  *  </second_frame>
            <third_frame>   K  I  V  V  S  F  P  I  M  Y  C  I  V  V  Q  K  F  E  F  R  H  L  F  M  N  Y  A  F  A  F  D  L  E  T  D  K  I  Y  I  S  E  E  A  N  *  I  I  S  V  S  L  A  L  C  K  R  *  E  F  V  D  L  T  P  T  L  W  R  K  L  T  C  T  A  I  A  V  Q  C  R  R  R :   F  C  I  F  F  N  M  M  *  L  P  G  N  L  S  Q  M  V  F  T  I  S  I  *  P  F  F  G  T  C  K  *  I  V  I  S  V  D  K  M  E  P  K  G  V  G  F  L  D  S  G  R  R  T  V  V  G  E  K  S  K  V  V  T  Q  N  L  A  H  L  L  R  A  S  S  E  K  I  S  I  Q  S  N  C  D  R  K  L  E  K  R  K  R  I  V  H  C  E  S  N  S  Q  S  H  L  R  I  S  E  H  K  N  Y  L  N  F  K  R  S  R  L  P  L  R  V  L  F  Y  Q  N  G  E  W  T  D  F  P  Q  D  I  I  P  I  V  K  E  D  F  R  A  K  K  T  V  I  E  V  K  V  C  D  F  H  I  I  L  D  I  L  H  M  V  Q  I  D  V  I  N  G  L  Q  K  P  I  A  W  I  D  E  V  G  R  C  F  F  P  E  S  Y  L  I  S  S  E  M  L  G  N  F  E  T  L  S  K  R  T  E  E  F  M  T  T  E  P  D  R  I  T  D  M  K  L  Q  L  D  T  D  L  N  G  L  D  N  R  N  L  E  E  D  V  E  E  S  N  I  G  Y  K  R  N  K  V  C  P  L  K  D  S  Q  E  V  A  D  Y  K  K  S  D  A  K  I  A  Q  V  A  E  N  K  Q  N  Q  E  T  P  S  P  D  L  E  A  S  L  K  F  V  N  A  E  S  V  K  N  M  F  I  M  G  M  N  V  N  P  N  K  C  E  I  K  I  N  K  C  S  S  N  Y  L  T  T  R  L  E  L  F  E  K  Q  V  E  I  T  Q  K  Y  R  G  N  S  N  V  R  Y  A  W  L  A  A  S  K  D  L  I  S  T  I  M  K  Y  G  L  A  P  G  G  S  K  Y  R  P  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0042L06.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="146443" stop="147516"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1074</number_coding_nucleotides>
                  <number_encoded_amino_acids>358</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IVISVDKMEPKGVGFLDSGRRTVVGEKSKVVTQNLAHLLRASSEKISIQSNCDRKLEKRKRIVHCESNSQSHLRISEHKNYLNFKRSRLPLRVLFYQNGEWTDFPQDIIPIVKEDFRAKKTVIEVKVCDFHIILDILHMVQIDVINGLQKPIAWIDEVGRCFFPESYLISSEMLGNFETLSKRTEEFMTTEPDRITDMKLQLDTDLNGLDNRNLEEDVEESNIGYKRNKVCPLKDSQEVADYKKSDAKIAQVAENKQNQETPSPDLEASLKFVNAESVKNMFIMGMNVNPNKCEIKINKCSSNYLTTRLELFEKQVEITQKYRGNSNVRYAWLAASKDLISTIMKYGLAPGGSKYRPK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="145634" e_stop="146234"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="145634" e_stop="146234" e_length="601"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="145634" stop="146234"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U338391" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGGATCAATATATTTAGGAGAATACTGATGGAGGAGGACATTGACCTCTCTTCTTTTTTTAAAAAAAAAAATTGTTGTTTCTTTTCCAATTATGTATTGCATTGTAGTGCAGAAGTTTGAATTCAGACATTTATTTATGAATTATGCATTTGCTTTTGATTTGGAAACTGACAAAATTTACATTTCAGAGGAAGCCAATTAGATTATATCTGTTAGTTTAGCATTGTGCAAAAGGTAAGAATTTGTTGACTTGACACCGACTTTATGGAGAAAATTGACTTGTACAGCAATCGCCGTGCAGTGCAGAAGGCGGTCAGTATCTCAAACTAACCTATGTTCTGCGCACACTTTCTTTCTCCGCTTAGGATAAAATATATCTTTGTTTTCAAAAATGGTAAATGGTTTGTGACTTCAGTTGGATGCATTTCAATGTTTTATCTTCTCACCTTTCCTGTGGTCAAGTATACGTTTGTGTTAGAAACTTAGACCAATAAGCTATTCAAGTCACTTGGCATCGGTTGCTTTAGTAGTATGTATGGACTTCTATATTTCTACGGAATGCCTTTGTTCAATTTGTCAAGTATCTGCTTTCTAAAAAAA</gDNA_template>
            <first_frame> W  D  Q  Y  I  *  E  N  T  D  G  G  G  H  *  P  L  F  F  F  *  K  K  K  L  L  F  L  F  Q  L  C  I  A  L  *  C  R  S  L  N  S  D  I  Y  L  *  I  M  H  L  L  L  I  W  K  L  T  K  F  T  F  Q  R  K  P  I  R  L  Y  L  L  V  *  H  C  A  K  G  K  N  L  L  T  *  H  R  L  Y  G  E  N  *  L  V  Q  Q  S  P  C  S  A  E  G  G  Q  Y  L  K  L  T  Y  V  L  R  T  L  S  F  S  A  *  D  K  I  Y  L  C  F  Q  K  W  *  M  V  C  D  F  S  W  M  H  F  N  V  L  S  S  H  L  S  C  G  Q  V  Y  V  C  V  R  N  L  D  Q  *  A  I  Q  V  T  W  H  R  L  L  *  *  Y  V  W  T  S  I  F  L  R  N  A  F  V  Q  F  V  K  Y  L  L  S  K  K  </first_frame>
            <second_frame>  G  I  N  I  F  R  R  I  L  M  E  E  D  I  D  L  S  S  F  F  K  K  K  N  C  C  F  F  S  N  Y  V  L  H  C  S  A  E  V  *  I  Q  T  F  I  Y  E  L  C  I  C  F  *  F  G  N  *  Q  N  L  H  F  R  G  S  Q  L  D  Y  I  C  *  F  S  I  V  Q  K  V  R  I  C  *  L  D  T  D  F  M  E  K  I  D  L  Y  S  N  R  R  A  V  Q  K  A  V  S  I  S  N  *  P  M  F  C  A  H  F  L  S  P  L  R  I  K  Y  I  F  V  F  K  N  G  K  W  F  V  T  S  V  G  C  I  S  M  F  Y  L  L  T  F  P  V  V  K  Y  T  F  V  L  E  T  *  T  N  K  L  F  K  S  L  G  I  G  C  F  S  S  M  Y  G  L  L  Y  F  Y  G  M  P  L  F  N  L  S  S  I  C  F  L  K  K </second_frame>
            <third_frame>   G  S  I  Y  L  G  E  Y  *  W  R  R  T  L  T  S  L  L  F  L  K  K  K  I  V  V  S  F  P  I  M  Y  C  I  V  V  Q  K  F  E  F  R  H  L  F  M  N  Y  A  F  A  F  D  L  E  T  D  K  I  Y  I  S  E  E  A  N  *  I  I  S  V  S  L  A  L  C  K  R  *  E  F  V  D  L  T  P  T  L  W  R  K  L  T  C  T  A  I  A  V  Q  C  R  R  R  S  V  S  Q  T  N  L  C  S  A  H  T  F  F  L  R  L  G  *  N  I  S  L  F  S  K  M  V  N  G  L  *  L  Q  L  D  A  F  Q  C  F  I  F  S  P  F  L  W  S  S  I  R  L  C  *  K  L  R  P  I  S  Y  S  S  H  L  A  S  V  A  L  V  V  C  M  D  F  Y  I  S  T  E  C  L  C  S  I  C  Q  V  S  A  F  *  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0042L06.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="147947" PGL_stop="150798"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="147947" e_stop="148177"/>
            <exon e_start="148983" e_stop="149691"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.242" acc_prob="0.914" e_score="1.000"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="147947" e_stop="148177" e_length="231"/>
          </exon>
          <intron i_serial="1" don_prob="0.242" acc_prob="0.914">
            <gDNA_intron_boundary i_start="148178" i_stop="148982" i_length="805"/>
          </intron>
          <exon e_serial="2" e_score="0.999">
            <gDNA_exon_boundary e_start="148983" e_stop="149691" e_length="709"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="147947" stop="148177"/>
              <exon start="148983" stop="149691"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U331072" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCGATGCTGATGAAAATGGCGTACATTACATGGTTTTTGCTCGTGTGATTTTGGGTAATATGGAACCTTTACACTGCGGATCTGAACAATGGCATCCCAGTGATGAAAAATATGATAGTGGAGTTGATGATCTCGAGAATCCTACTCATTATGTTATTTGGAATATGAATTTGAACACACATATATACCCAGTGTGTGTTGTGAGCTTCAGAATTCCTCCAGGAGCTGAAG : GACCCCGCGTTGGAAATGATAGTCGGATTGATGTCTCAGGTGTCAATACTTGTCCTCGGGGCCCTGTGGAACAGGTACCCACAAATACATTTCCGAAGGACTTGGGAAGTTTAGCTACAATATTGTACACTTAGGTTGTTGGGGGGATTTTATTATATGATCTTCATTAAACTATAAGATGGGGGAGTTGTGAGAGACAGTGTTGGACATGCAACAAAATCGATTTTTGAAATAAATTTAGGATTTTGAAAATTTTTAAAGAAATCAAGCACAATAGGCAAAGAAGAGGAACATGAAGTTCACTAATTCGAAAGGCCATGTCTTGAGTTTCTTTGGCAAAATGAGTGAACATCAAAAGAACTGTAAGTTACTTTATATGCTTTGACATGTTTGTTGCGCTTATATTTATTGTGTCGATTTATCTTCTTGATCAATGGTTGAGTTACTTCCTCAGATGCATGCTAGTTATCTAGGAAAACATTGATGCCATAGGCACTTGATAAAGTACTCTCTAGAAGATTGTTTGATATTATTTAACGGGTTTGCAACAAATAATCTGCATCCACTACTGAAAAGGCATAGTAATTGCTCTTGCACATGCTTTAACACCGGTATTCTTCATCTGCCGCACAAGTAACATTTCTGTTTTACATGTCCTACAAGAAACATGTCTGTTTTGCAGCCTTGCTGGAATTGTATCTGTTCATCA</gDNA_template>
            <first_frame> A  M  L  M  K  M  A  Y  I  T  W  F  L  L  V  *  F  W  V  I  W  N  L  Y  T  A  D  L  N  N  G  I  P  V  M  K  N  M  I  V  E  L  M  I  S  R  I  L  L  I  M  L  F  G  I  *  I  *  T  H  I  Y  T  Q  C  V  L  *  A  S  E  F  L  Q  E  L  K  :  D  P  A  L  E  M  I  V  G  L  M  S  Q  V  S  I  L  V  L  G  A  L  W  N  R  Y  P  Q  I  H  F  R  R  T  W  E  V  *  L  Q  Y  C  T  L  R  L  L  G  G  F  Y  Y  M  I  F  I  K  L  *  D  G  G  V  V  R  D  S  V  G  H  A  T  K  S  I  F  E  I  N  L  G  F  *  K  F  L  K  K  S  S  T  I  G  K  E  E  E  H  E  V  H  *  F  E  R  P  C  L  E  F  L  W  Q  N  E  *  T  S  K  E  L  *  V  T  L  Y  A  L  T  C  L  L  R  L  Y  L  L  C  R  F  I  F  L  I  N  G  *  V  T  S  S  D  A  C  *  L  S  R  K  T  L  M  P  *  A  L  D  K  V  L  S  R  R  L  F  D  I  I  *  R  V  C  N  K  *  S  A  S  T  T  E  K  A  *  *  L  L  L  H  M  L  *  H  R  Y  S  S  S  A  A  Q  V  T  F  L  F  Y  M  S  Y  K  K  H  V  C  F  A  A  L  L  E  L  Y  L  F  I  </first_frame>
            <second_frame>  R  C  *  *  K  W  R  T  L  H  G  F  C  S  C  D  F  G  *  Y  G  T  F  T  L  R  I  *  T  M  A  S  Q  *  *  K  I  *  *  W  S  *  *  S  R  E  S  Y  S  L  C  Y  L  E  Y  E  F  E  H  T  Y  I  P  S  V  C  C  E  L  Q  N  S  S  R  S  *  R :   T  P  R  W  K  *  *  S  D  *  C  L  R  C  Q  Y  L  S  S  G  P  C  G  T  G  T  H  K  Y  I  S  E  G  L  G  K  F  S  Y  N  I  V  H  L  G  C  W  G  D  F  I  I  *  S  S  L  N  Y  K  M  G  E  L  *  E  T  V  L  D  M  Q  Q  N  R  F  L  K  *  I  *  D  F  E  N  F  *  R  N  Q  A  Q  *  A  K  K  R  N  M  K  F  T  N  S  K  G  H  V  L  S  F  F  G  K  M  S  E  H  Q  K  N  C  K  L  L  Y  M  L  *  H  V  C  C  A  Y  I  Y  C  V  D  L  S  S  *  S  M  V  E  L  L  P  Q  M  H  A  S  Y  L  G  K  H  *  C  H  R  H  L  I  K  Y  S  L  E  D  C  L  I  L  F  N  G  F  A  T  N  N  L  H  P  L  L  K  R  H  S  N  C  S  C  T  C  F  N  T  G  I  L  H  L  P  H  K  *  H  F  C  F  T  C  P  T  R  N  M  S  V  L  Q  P  C  W  N  C  I  C  S  S </second_frame>
            <third_frame>   D  A  D  E  N  G  V  H  Y  M  V  F  A  R  V  I  L  G  N  M  E  P  L  H  C  G  S  E  Q  W  H  P  S  D  E  K  Y  D  S  G  V  D  D  L  E  N  P  T  H  Y  V  I  W  N  M  N  L  N  T  H  I  Y  P  V  C  V  V  S  F  R  I  P  P  G  A  E   : G  P  R  V  G  N  D  S  R  I  D  V  S  G  V  N  T  C  P  R  G  P  V  E  Q  V  P  T  N  T  F  P  K  D  L  G  S  L  A  T  I  L  Y  T  *  V  V  G  G  I  L  L  Y  D  L  H  *  T  I  R  W  G  S  C  E  R  Q  C  W  T  C  N  K  I  D  F  *  N  K  F  R  I  L  K  I  F  K  E  I  K  H  N  R  Q  R  R  G  T  *  S  S  L  I  R  K  A  M  S  *  V  S  L  A  K  *  V  N  I  K  R  T  V  S  Y  F  I  C  F  D  M  F  V  A  L  I  F  I  V  S  I  Y  L  L  D  Q  W  L  S  Y  F  L  R  C  M  L  V  I  *  E  N  I  D  A  I  G  T  *  *  S  T  L  *  K  I  V  *  Y  Y  L  T  G  L  Q  Q  I  I  C  I  H  Y  *  K  G  I  V  I  A  L  A  H  A  L  T  P  V  F  F  I  C  R  T  S  N  I  S  V  L  H  V  L  Q  E  T  C  L  F  C  S  L  A  G  I  V  S  V  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0042L06.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="147949" stop="148177"/>
                    <exon start="148983" stop="149116"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DADENGVHYMVFARVILGNMEPLHCGSEQWHPSDEKYDSGVDDLENPTHYVIWNMNLNTHIYPVCVVSFRIPPGAEGPRVGNDSRIDVSGVNTCPRGPVEQVPTNTFPKDLGSLATILYT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="149024" e_stop="149056"/>
            <exon e_start="149741" e_stop="149905"/>
            <exon e_start="150016" e_stop="150111"/>
            <exon e_start="150494" e_stop="150798"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.924" acc_prob="0.970" e_score="1.000"/>
          <exon-intron don_prob="0.883" acc_prob="0.943" e_score="0.994"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.967"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="149024" e_stop="149056" e_length="33"/>
          </exon>
          <intron i_serial="1" don_prob="0.924" acc_prob="0.970">
            <gDNA_intron_boundary i_start="149057" i_stop="149740" i_length="684"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="149741" e_stop="149905" e_length="165"/>
          </exon>
          <intron i_serial="2" don_prob="0.883" acc_prob="0.943">
            <gDNA_intron_boundary i_start="149906" i_stop="150015" i_length="110"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="150016" e_stop="150111" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="150112" i_stop="150493" i_length="382"/>
          </intron>
          <exon e_serial="4" e_score="0.967">
            <gDNA_exon_boundary e_start="150494" e_stop="150798" e_length="305"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="149024" stop="149056"/>
              <exon start="149741" stop="149905"/>
              <exon start="150016" stop="150111"/>
              <exon start="150494" stop="150798"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330896" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTCAATACTTGTCCTCGGGGCCCTGTGGAACAG : GGAAGTCATCGTTTTCAAGTATCACTAGTTAAGTTGGCCCTGGAAGAGGCTGCGAGGATTCCAAAGTCCAGTGGGGTGCCATTCTCCTTGTTGATTGATGCAATCTCCAATGTAGTAAATGCCGAGAAAATGAACCATGTTACTAGAAGTTATGAGTTGCTTGGG : TTCAAGAAGATATGTAGGGATGAATTTGAGAAACGGTTGGTTGCAATCGTAGGCCTTACTCTGTTGAAGTCCACAACGAAAAGTTTGCTGTGCAAG : ATACAATCAAAACCCATTGAAATGGTTCAGCCAAAGCAAGAGCCACAAAGTGCTGACTTCAAAGGAAATACTGCCCTATTCCATTGGATAGAGCCACAGACCGAGTAACTGTGTTTATGTGGAACACCTTCTCTCTGTTGTAGTGAGATCGTTTAGATGGTTGGATTTCCTTTTCTACTGGAATGTGATAGTAGCATCTGTTCTTTTGTCCTAGAATATGGATTCGTGAAGTAGTTAGTTTCTTTTATTTGAACTGGTTAAAAACAGTTTAGTTTCAGCTACTCTTTGAAGTGAATGCTTATGAA</gDNA_template>
            <first_frame> V  N  T  C  P  R  G  P  V  E  Q  :  G  S  H  R  F  Q  V  S  L  V  K  L  A  L  E  E  A  A  R  I  P  K  S  S  G  V  P  F  S  L  L  I  D  A  I  S  N  V  V  N  A  E  K  M  N  H  V  T  R  S  Y  E  L  L  G  :  F  K  K  I  C  R  D  E  F  E  K  R  L  V  A  I  V  G  L  T  L  L  K  S  T  T  K  S  L  L  C  K  :  I  Q  S  K  P  I  E  M  V  Q  P  K  Q  E  P  Q  S  A  D  F  K  G  N  T  A  L  F  H  W  I  E  P  Q  T  E  *  L  C  L  C  G  T  P  S  L  C  C  S  E  I  V  *  M  V  G  F  P  F  L  L  E  C  D  S  S  I  C  S  F  V  L  E  Y  G  F  V  K  *  L  V  S  F  I  *  T  G  *  K  Q  F  S  F  S  Y  S  L  K  *  M  L  M   </first_frame>
            <second_frame>  S  I  L  V  L  G  A  L  W  N  R :   E  V  I  V  F  K  Y  H  *  L  S  W  P  W  K  R  L  R  G  F  Q  S  P  V  G  C  H  S  P  C  *  L  M  Q  S  P  M  *  *  M  P  R  K  *  T  M  L  L  E  V  M  S  C  L  G :   S  R  R  Y  V  G  M  N  L  R  N  G  W  L  Q  S  *  A  L  L  C  *  S  P  Q  R  K  V  C  C  A  R :   Y  N  Q  N  P  L  K  W  F  S  Q  S  K  S  H  K  V  L  T  S  K  E  I  L  P  Y  S  I  G  *  S  H  R  P  S  N  C  V  Y  V  E  H  L  L  S  V  V  V  R  S  F  R  W  L  D  F  L  F  Y  W  N  V  I  V  A  S  V  L  L  S  *  N  M  D  S  *  S  S  *  F  L  L  F  E  L  V  K  N  S  L  V  S  A  T  L  *  S  E  C  L  *  </second_frame>
            <third_frame>   Q  Y  L  S  S  G  P  C  G  T   : G  K  S  S  F  S  S  I  T  S  *  V  G  P  G  R  G  C  E  D  S  K  V  Q  W  G  A  I  L  L  V  D  *  C  N  L  Q  C  S  K  C  R  E  N  E  P  C  Y  *  K  L  *  V  A  W   : V  Q  E  D  M  *  G  *  I  *  E  T  V  G  C  N  R  R  P  Y  S  V  E  V  H  N  E  K  F  A  V  Q   : D  T  I  K  T  H  *  N  G  S  A  K  A  R  A  T  K  C  *  L  Q  R  K  Y  C  P  I  P  L  D  R  A  T  D  R  V  T  V  F  M  W  N  T  F  S  L  L  *  *  D  R  L  D  G  W  I  S  F  S  T  G  M  *  *  *  H  L  F  F  C  P  R  I  W  I  R  E  V  V  S  F  F  Y  L  N  W  L  K  T  V  *  F  Q  L  L  F  E  V  N  A  Y  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0042L06.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="149024" stop="149056"/>
                    <exon start="149741" stop="149905"/>
                    <exon start="150016" stop="150111"/>
                    <exon start="150494" stop="150601"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>399</number_coding_nucleotides>
                  <number_encoded_amino_acids>133</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VNTCPRGPVEQGSHRFQVSLVKLALEEAARIPKSSGVPFSLLIDAISNVVNAEKMNHVTRSYELLGFKKICRDEFEKRLVAIVGLTLLKSTTKSLLCKIQSKPIEMVQPKQEPQSADFKGNTALFHWIEPQTE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 47 chains have been computed
$ 
$ memory statistics:
$ 288360 bytes spliced alignments in total
$ 17 spliced alignments have been stored
$ 16962 bytes was the average size of a spliced alignment
$ 20640 bytes predicted gene locations in total
$ 13 predicted gene locations have been stored
$ 1587 bytes was the average size of a predicted gene location
$ 3 megabytes was the average size of the backtrace matrix
$ 61 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 11:47:19
-->
