<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 17:41:06"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U314031" ref_strand="+" ref_description="SGN-U314031        Tomato 200607 #1 [8 ESTs aligned]">
      <seq>cttttgagccaaagaattattaatacatgcaagacactattctagaattgttattttagttaggttttacctcaatattctcctatggttcccacaatcctagttatggagtttagttaaccatagtcataatcacaatattcaaatatatcatataagaattcatgtacttaattcaaagagaaagagtaaaatctgagagttttcttgatttatcacaaaaaatcaccaacaattaatgataatcaaaagtctaacaataaaatgttttcttatacgatgtctaacaatacggagtctaacaatgatccagagtcttacctcaaaaatgatgtttttagaactatttatagaaaataaaaacctaattaaacaaggactatatttgctggaaatctgccaaaacgcggctgggtcgacggacctcacgacggatcgtcgtggtcacgacggaccgtcatggactccgtcgtcccatacttatgcaatttcttttgctgctctcttcattaccctcgacggcaagtatgacggaccgtcataggcacaacggtccgtcgagggtcttcgttccaaaacacttaaactcttggaatatgggtactgggattacttctctgaacttcatgacgaacctgtaggacggaccgtcatagacacgatggaccgtcacaagcttcgtaaccccatacttggtcagacttccccatcttccttcagcagctgcactacgctgacacctacgtaccgtcacaagcatgacggaccgtcataagctccgtaggtggtctcttctgcatttcttcgctcaaaacctctgcattcagctttggacagatttcctgcaaaataaaaagaaactaatatagaaattagcacaaaaaggattttagacacactaaacttaaggaaaaagtattaataataccatgaaaccacggtatatcactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0049I02.1" temp_strand="+" temp_description="C06HBa0049I02.1  AC216646.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0049I02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="52126" stop="53664"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52416" g_stop="53367" g_length="952"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="951" r_length="951" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0049I02.1" gen_strand="+" ref_id="SGN-U314031" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>952</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0049I02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U314031" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52416" e_stop="53367"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTAAATGAAAGAATTATTAATACATGCAAGACACCATTCTAGAATTGTTATTTTAGTTATGTTTTATCTCATTATTTGCCTATGGTTCCCACAACCCTAGTTATGGAGTTTAGTTACCCACAGTCATAATCACAATATTCAAATATGTTAAATAAGAGTTCATGTACTTACTTCAATGAGAAAGAGTAAACTCCGAAACTTTGCTTGATTAATCACCAAAAATCACCAACAATCAATGATAATCTAAAGTCTAACAATACAGTGTTTTCTAATACAGAGTCTAACAATGATCCAGAGTCTAAC-CTCAT--AGAGTCTAACCTCAAAAACTAGGTTTTTTGAACTATTTATAGAAAATAAAAACCTAATTAAACAAGGACTCTATTTGCTGGAAATCTACCAAAACGCGGCTAGGTCGACGGACCTTGCGACGGATCGTCGTGGTCACGATGGACCGTCATGGACTCCGTCGTCTCATACTTATGCAATTTCTTCTGCTGCTCTTCTTCATTACCCTCGACGGCAAGTATGACGGACCATCATAGGCACAACGGTCCGTCGAGGGTCTTCGTCCCAAAACACTTCAAATCTTGGAATATGGGTACTAGGATTACTTCTCTAAACTTCATGACGAACCTGCAGGACGGACCGTCATAGACACGACGGACCGTCACAAGCTTCGTAACCCCACACTTGGTCAAACTTCCCCATCTTCCTTCAGCAGCAGCACTACGCTTCCACCTACGGACCGTCACAAGCACGACGGACCGTCATAAGCTCCGTAGGTGGTCTCTTCTGCATTTCTTCGCTCAAAATCTCGGCATTCAGCTTTGGACAGATTTTCTGCAGAATAAAAAGAAACTTATATAAAAATTAGCACAAAAAGGCTTTTGGACACACTAAACTTAAGGAAAAAGTATTAATAATACCGTGAAACCGCGATATATCATCC</genome_strand>
        <mrna_strand>CTTTTGAGCCAAAGAATTATTAATACATGCAAGACACTATTCTAGAATTGTTATTTTAGTTAGGTTTTACCTCAATATTCTCCTATGGTTCCCACAATCCTAGTTATGGAGTTTAGTTAACCATAGTCATAATCACAATATTCAAATATATCATATAAGAATTCATGTACTTAATTCAAAGAGAAAGAGTAAAATCTGAGAGTTTTCTTGATTTATCACAAAAAATCACCAACAATTAATGATAATCAAAAGTCTAACAATAAAATGTTTTCTTATACGATGTCTAACAAT-A--CGGAGTCTAACAATGATCCAGAGTCTTACCTCAAAAATGATGTTTTTAGAACTATTTATAGAAAATAAAAACCTAATTAAACAAGGACTATATTTGCTGGAAATCTGCCAAAACGCGGCTGGGTCGACGGACCTCACGACGGATCGTCGTGGTCACGACGGACCGTCATGGACTCCGTCGTCCCATACTTATGCAATTTCTTTTGCTGCTC-TCTTCATTACCCTCGACGGCAAGTATGACGGACCGTCATAGGCACAACGGTCCGTCGAGGGTCTTCGTTCCAAAACACTTAAACTCTTGGAATATGGGTACTGGGATTACTTCTCTGAACTTCATGACGAACCTGTAGGACGGACCGTCATAGACACGATGGACCGTCACAAGCTTCGTAACCCCATACTTGGTCAGACTTCCCCATCTTCCTTCAGCAGCTGCACTACGCTGACACCTACGTACCGTCACAAGCATGACGGACCGTCATAAGCTCCGTAGGTGGTCTCTTCTGCATTTCTTCGCTCAAAACCTCTGCATTCAGCTTTGGACAGATTTCCTGCAAAATAAAAAGAAACTAATATAGAAATTAGCACAAAAAGGATTTTAGACACACTAAACTTAAGGAAAAAGTATTAATAATACCATGAAACCACGGTATATCACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U334737" ref_strand="-" ref_description="SGN-U334737        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>gtaatccttatactcaaactaaaatcactgtgtgaaaaaggaggattttgtcttatagtgaggacactagttgcaatactagaattgttagcacctcggtgagaaattgaagaggataggtgttagtgcatggtaagtctgtgtcatattctgatcccacaaaattcaaacctaatagtgatagcatgcatagatttgatgagattaatcgggattgatagccaaatgattgcaaaggataaaacatggatactattgtacaaagattgtgtagtgagtcatagtgcgtcgcttgaggacaaacaactaatttaagttgagggtgttgatataccgtggtttcacggtattattaatactttttccttaagcttagtgtgtccaaaagcctttttgtgctaatttttatataagttactctttgttttgcaggaaatctgtccaaagctgaatgcggagattttgagcgaagaaatgcagaagaaaccacctacggagcttatgacggtccgtcgtgcttgtgacggtccgtaggtggaagcgtagtgcagctgctgaaggaagatagggaagtctgactaagtgtgggattacgaagcttgtgacggtccgtcgtggatctgacggtccgtcctgcaggttcgtcgtgaagttcagagaagtgatcccagtacccaaattccaagagttgaagtgtattagaacaaagaccctcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0049I02.1" temp_strand="-" temp_description="C06HBa0049I02.1  AC216646.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0049I02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="64348" stop="52675"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64049" g_stop="63705" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="346" r_length="346" r_score="0.884"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63704" i_stop="53345" i_length="10360">
            <donor d_prob="0.730" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53344" g_stop="52975" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="716" r_length="370" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0049I02.1" gen_strand="-" ref_id="SGN-U334737" ref_strand="-">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0049I02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U334737" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="64049" e_stop="63705"/>
          <exon e_start="53344" e_stop="52975"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAATCCTTATACTCAAACTGAAATCATTGTGTGAAAAATGAGGATATTGTTTTGAAGTGAGGACACTAGTCGCAATACTGGAAATATTAGCACCTCGGTGAGAAATTGAAGAGGACAAGTGTTAGTGCATGGTGAATCTTTGTCATGGTCTAATTCCACATAATTCAAGCCTAATAGTGATAACATGCATAAATATGATGAGACTGATCGGGATTGATAGCCAAATTATTGTGAAAGATAAAACATGGATACTATTGTACAAAGATTTTGTATTGAGTCATAGTGCGTCGCTT-AGGACAAACAACGAATTTATGTTGAGGGTGTTGATATACCATGGTTTCATGGTATTTTTAATGCTTTTTTCCTTTAGTTTAGTGTGTTTCCAAAAGCCTTTTTGTATTAATTTTTATGTAAGTTTCTCCTTATTTGCAGGAAAGCTGTCTAAAAGATGAATGCGGAGGTTTTTGAGCAAGAAATGCAGAAAAGTACCACCTACGGAGCTTGTGACGGTTCGTCGTGCCAGTGACGGTCCGTAGGTTGCATTGTAGTGAAGCTGCTGAAGGAAGATGGGGAAGTCTGACCAAGTGTGGGGTTACAGAGTGCGTGAAGGACCGTCGTAGCCATGACGGTCTATCCTGCTGGTTCGTCATGAAGATCATAGAAGTAGTCCCAGTACCCAAATTCCAAGAGTTCAAGTGTTATGTATCGAAGACCCTCGACGGACTGTTGTGCCTCTGACGATCTGTCATACCCGCCGTCGAGGGTAATGAAGAGAGCAGTAGAATAATTTGTGAACTATGGGATAACGGAGTCCATGACGGCCCATCGTGACCACGATGACCCGTCGCGAGGTCCGTCGACCCAACATTGTTTTGACAAATTTCCAACAAATAGAATCCTTCATTGATTAGGTTTTTTGTTTTTTATAAATAGTTTGAAAAACCTCGTTTTTGGGGTTAGACTCTTGGTTATTAGACACTTTAATGTTACATTCTTTGTGAGGAGATTATTTTTATTATTACACTTTGGATTGTTGGTGATTTTGTCGATTAATCAAGTAAATTTCTGGATTTTATTCTTTCTCCTTGAAGTAAGTGCATGAATTCTTATATCATATAGTTGAATATTGTGATTATGACTCTGGGTAACTAAACTCCATAACTGGGGTTTTGGGAACCATAGGCTAATAATGAGGTAAAACCTAACTAAAATAACAATTCTAGAATAGTGTCTTGCATGTATTGATAATTCTTTCGCATAGAAATCTTTTTAACGAATGGCAAATGTTAGAACTCGCCTTAATGCTACTTACCGGACCAAAGAGGTAATTAATAGAAAAAGAATTATCAACATAAATTTAGTGTATACTATCTAATAGGCTAGTATTGATTGGTACGAGGTAATAACTTAGTCAAATATCGAATACAATGCTTAATATGAGGTAAAGGTAAGGGTTAGGATAGCAACACACGTAGCCGGACCAAGGTGAGGAGTGAAATGTTCTAGATACCGGACCAAGGATTTAGAAATACATAATACTTATCACTTTGCATGCAAGATACTAGGAAAAAATTGTTATAGTTAGAATTAACAAGTTAGGAACCTGTGGGGAACACATAAATCCTAGTTAATTTTATTAACTGATTAAACTCCAACATTTGAATATGCTAGTTGTCTACTTTGATTTAGCTAATTATTTTTATAAATATAACTCCCACTTTTATTGTCTTTGTTTTCTAAGGGATTAATTGACTAAATAGTAGTACTAATAGATTGAAGTTAAGTCTGAACTATTTTCCTTGTGGGAACGATCCTAACCTCATTAGTTGGGTTCTTTACTTGATACAATCGCTTTACTTCTTATTTGAAAAGTAAGTTTGAGCATATCATGTTTTATTCTTTATTATTCTATATTTGTGTAATTATATTCTAAGAGGCTTACTTGGGTTCCTTTGGGATTCCGTATGCCATGCTACGTCTAATGGGTACCCTTGGGTCATGAAAAACTTTATATCAGAGCAAAAGGCTTAGAATGATTCTACGATTAGGTCTCATAAGCCATGTATAGTAGAGCCTTGTTCATAGTACAAAATACTCCATATTTATGAGTGAAAGGCTATAAGATGTCAGGACATTTCACTTTCTTCATTATTCTTAGGTTGTGCCATATATAGAGTCTACTCTATAATGTTTTCCTCCTAATCCTTATCTTGTGTCTTTAGGATATAAATACATGAAGGGCTAACATATGATGGGCGGAAGAAGAGAATGTGAATCGAAGAGCTCCTCAAGACAATCAAGATCCTAATGATAAGCAAGCTCTAGTAGATCAGATAAATGTGACCCAAGAAGAATTTCGGGCTACTATTCAAATGATGACTCAAGCTATGATGGCTCATGCTCAAGATGTAACAAATCAAGCCCAAACTTTAATGACATAAATCAATATGGATGTTGGGCCTAATGTGAACCTTAATGTGAACTCCGTAGGTTCAAGGTTAAAGGATTTCACAAGAATGAATCCTCCTATTTTATTTGGTTCCAAAGTGGGTGAAGATCCTTAAGAGTTTGTGGAGGAATTTCTATAGAGAAAGCGGAACTAGCCGCATATCAATCGAAGGGAGTGACCCAAGTATGGTATACTCAATGGAAGAGAAATACGCCAGAGGGAGAGGGTATCATAGGTTGCGAGGTGTTTAAGAAAGCATTCCTTGATATGTTCTTTCCAAGGGAGAAAAGGGAAGCCAAGGAAGAAGAGATTATCAACCTTCGTCTAGGAGGTATGAATGTAAAGGAGTACTTCCTAAAATTTACCGAATTGTTCAAGTATGCTCCACTTTTTGTGGTAGATCCAAGGGATGAAATGAGTAGGTATGTGATGGATATATCAAAGGTGGCAAGAAAATAATGCCGCATGACAATGCTCCTTCATGAAATGGATCTTTCGCGTTTTATGGTTTATGTCCAACAAATAGAGAGTGAGAAACTCCAAGGCAATAGGGGGTTGAAAAGAGCTAGAATCGATGAAAGGAATTATTCTAATAGTAAGTCCAATAGGCAAGATCGCCAAAGCTTCAAGGAAAGGTTCTCCAATTAAGGCTCATCTAATGCTACAAGAATTTACAATGATACGCCTTCCAACCCTAAATCACAACGACGTAATAGTGGTGGTTCCTATGTTTCTAGGCTTAATTGTGCAAAATGTAGCAGGAAAAATGGAGGCAAGTGCTTAGTTAGTTCAGATGGGTGCTATGGATCTGTCAAGAGTGGTCACAAGATGAGAGATTGTCTGCCACTCATGGCCAAGGGGAGAGAAAGTAGACCAACTCCTCCAAGCAGGTCCAACTCCAATGATCAAAAGCAAAAACACTTGTATGCACTTCAATCCTGAGGTGACCAAGAGCACACCCCATATGTGATGATTGGTATGTTGCAAGTCTTTTCTATTGATTTTATGCATTGTTAGATCCCGGTGCCACTTTGTATTTTGTTACACCTTTTATGGCAATGAAGTTTGAACTACTCCTCGAAGTATTAGAAGAGCCTTTTCAATTTCTACCACGATTGGTGACTCAGTAGTGGCAAAAAGAGTATAGAAGTTTTCCTATTTCATTGTCTCATAAATTTACTTTGGTAGATTTAGTAAAAGTTAGATATGCTTGATTTTGATGTAATTTTGGATATGGATTGGTTGCATGCATGGTATACTTCTATAGATTTTAGGATCCGGGTGGTCATATTTTAATTTACAAATGAGCTAAATTAGGAGTAAAAAAAAGGGAATTCTATTCCTAGAGGTCAATTTGTTTCTTGTCTCAAATCTAGGAAAATGGTATCCAAAAGATGCATGTATCATATTGTTACAGTGATAGATGTTGAGTTCAAGGTCCCTTTTTAGAGTCCGTCCCCGTGGTGAGTGCATTTCCAAAAGTCTTTCCCAATGACTTCCCCAGACTCCTCCGAACGTGAAGTAGACTTTTACATTGATATTTTGCCATATACACAACACACATCCATCCTTCCATATAGAATGAATCCGTCCGAATTGAAAGAATTAAAGGAACAACTAAAGGATTTTCTAGACAAGGGTTTCATTCAACCGACTATCTCTCCTAGGGGTTCTCCGGTATTGTTTGTGAAAAATAAGGATGGGTCCTTTAGGATGAATTGACTACCACCAATTGAACAATGTAACTATAAATAATAAGTATCCTTGTGTGACCAACTCCGAGGGTCTAGCTACTTTTCGAAGATTGATCTACGTTCGGGCTATCACCAACTAAGCGTGAGGGGAGTTTACATTCCCAAAATGGTATTCCAAACAAGATATGGTCACTACGAATTCCTAGTAATTTCTTTAGGTATAAAAAATTCCTGACGACATTCATGGACCTAGTGAATAAGTTGTTCCGACAATATCTTGATAAGTTTGTCATAGCGGTTATTGATGATATCTTGATCTATTCTCGAAGTTAGGGTGAGTGATACACTAAATTACACCTCACTAAATAATCATAAGAAGTTGTTATCAAGTAAATAACCCAACTAGTAGGTTGACGTCAATCTCACGAGGAAAATGGTTTAGAGTTAACTTCAACCCACAATTATATTTGTCTAGTCAAGGTCTTTGCAAAACATTTAAATAAAAGGGGGGTTTGTGAAACAAATTCCTTCTTTAGTATGGTTATCAAGTGAACAAAATTAGACTTTGGTTGTTATCAAGATGAGAAAGTAACTAGGGTTTATGAGATCCCACAGGTTCATAACACATTATTCCTAGCAATAACAATCCTTTCCTAGTGTATTAAATGCAAAGTGATAAGTTAGGTATCTCTTAATCGTTGGTCCGGCATATAAAGAATTTCATCCCGCACCTTGGTCCGTCTACATGTGCATAATTTACTAACCTTTACTATTACCTCAAATTAGAATTCATAATCGATATATGACGTAGTTATTACTTTGCACCAATCGGCTCTAGACTATTAGATAGTATCACACTAAAACTATGTTGATAATTCTTTTCCTATTAACTACGTCCTTAGTCTGTCAAGTAGAAACAAGGCGAGTTCTAACGTTGGTCACCATAAAAAAGAATTCTAAAATAAAGAATTATCAATGCATGCAAAAACACTATTCAAGAATTGCTTAGTTAATAGTCATACTTTGATAAATCTCCCATGGATTCCACAACCCTAGTTGTGGATTTCGTTACCCATGTTAGCAAGATCACAATTCATACTTTTAGATGAAGAAATCATAAACTTACGTATAAAGACGAATAAACCCAGAAATTTCAACTTAAATTTCAACACAAATCTTTAAAAAGAATTCGGAATATAATAATCTGCCAAAGTTACATAGAAAAAAATCCCAAAAGCAAGAACTAGAACAAATGTAATAATAACCAACCCCAAAACGAGGTTTCTATCCTCTATTTATATAAAAAAGTCTTAATGAAAAAGAAATTCAAATAAGGAATTTTTTTTAGGTACACGACTTCAATCGACGAGACAATCGATGGTACATGGTTTGATTCCGTTATTCAACACTTAGAAAATATTTTGATCTCTTGATGGAACCCTCTCTAAATCAAACGACGGACTAAGAACATGGTCCGTCGATTCTCCTCTGTAGCTCCATACTTAGAATCTTCAAATATAAGGTACATGAATCATGTTTGAATAAAATGAACATTCACTAGTACAATGTGTCGATCAATCGAAGGACCGTCAATGACACTCGTGGTTCAACACTTTGTCAGACTTCCCTAATTTTCTTAAAATGCCTGAACTTCTCATCTACGACACCACCTACGGTCTGTCAATGGAACGATGGACCGTCGATTGCCTCTGTAAGTCTGTTTCTGCACTTTTTTCAATTGTCTTCTTAGCTTTCTTCTTGAACATCTTTCCTGCAAAACAAGACACAAAACTTGTTAAAACCAATATAAAAAGGCTCTAAACACACAAAATTCTTAAGTGAAGTGCATTAGAATTACCGTGAAATCACGGTACATCAACACCCTCAACTTAAATTCGTTGTTTGTCCTCAAGTGACACACTATAACCAGAAACGACACTTGTATAAAAGTAGACACTTTAAGCTCCAGTAATCACATGACTATCTATCCCGACTCTTTCTTGATTTAGTTCAGGCCTATGCACTAGACTCTCGACAAACTAAGTCATGTGGATCACATCATGAAACGAATTCACCATGCAACATACACCTCTACTGTTTTCCTCTCACTAGGGTACAAATGCTCTCATAATGTAACTAGTGCCCTCACTTTCAAAAAATTCCTGACTTTTCACACAGTGATTATGCATTTTGGGTACAAGGATATTTTTCAACACTCGCGCTGAGGAATGAGTTCAAATACAATTAGTACTCCACGCCGTATTCTTACCCTTATCTTCACTGCTTAAGTTTATCACATTAGATTCTAGGATCATGGTAGGACTTTATTGTCTTCTAACTAGGATTAGGGGTCGGTGTGGTACATTTGGGTACATTTAGTGACTATCTACCTTCCTTGACATTAACACTCAGATTTCTACCTCTTTTTATTGCTTTTGACATACTATATCTTTTCTCTTCTTTCCTTTGCCTTATTTCCCTTTTAGATGTGAATTTTTTCTAAAAAAACTCTCTTTATGTTCTTTCATATTTTCTAAATCACATGCTTCTCTTACTTATGCTTTTATTTTGAACATGTTACTCTATTATTTAGGTCTTTTCTCATACTAGCCACCTTCTACTCATGGATTTTCCATGAGTGGAGGTGCACAATACCCAATGCCAAGTCAAGGCCAGGATGGGGTCACTTTTTGGCATTAGCCACACTCAACTTAGGCTTTTGGCCTAAATTGAGGTGCACATGTCCAAGGATGGACTTGGAAAAAAATATTAGATCCTAGGAAATGAGTTGGTGAATCAAAAGTTGGTGTATTACAGGCTCAACATATTTGGATCAAAAGGGACAATTATTTTATTTGGACAACTTCCTTTAGGCTAGATACGTGCTATTTCGAACAAGGGACTATGATAACTTCCTAGCTTTTTGAGTAGACTTCTTTCGCAGGACTAACCGAGCAATTTCTAGTAAGGCACCAACTGTTGAACAATCAAATATCCTCACACTCTATTGGAAAATCGTTGCACTATCAGATTATCAGAATTCCCATTTCAGGTTTTAGTTTAAGGTCATGAAGTGGGTGCCTTTTCATGTCATGTTTAGAGCCAACATATTCAACTTATTTGACCCTACATATGCAAGCTCTACAATGGATGAGGTATTAATTTTTTATCATCCATCATGCTTCTGACTTTCATGCATTTATACTTTTACTCACTAGTACATGCCAATTTAACAGAAATTTAAGCATTCTCTTGGGGAAAAACACATGCAAGAAAACCCCAAGAGATAATCATGAGTTGGGCTACTCAGACTCACCCTATCAATCACATTTCATTTACCCCACCCAACAAAAAATTTGCAATTGTCCCCAATTCATAATAAATCATAAGTAACAGGGCGATTGGTGAAGAAAACTTGTGGTGCATAACACCGAAGACCTTTCAACAAGCGGGTGAGTAAAATTTCTCGGAGCCCGTAGGATCAACATTTAGGTCACAATAAGTAGTGCCACATACTTAAAGATGACACCATCGGTAGTGACATACACTTCTATCTCCACACCATCACTAGTGCTCCTTTCAGATCACATGCACAAAATTGGATGTCCGTACTGCTAATTCTTGCACCTTCCTCTAGTGCATCTCCTCATCTACTAGTGAGGCCCTCCTATTACGTTATAGATTCTTGTGCTCTCCTCTTCTTGCACGGGCATCATTACCGGCCTTAGTAGTGCCTCTTTCCATGAATACGGGGTACGGGATGTATCTCAGCACGAACTTTAAACAATGCCTCCAAAACAGTATCTTCGTCTAGCTCGGTGGGTGCATGCTCTGACTTAGTCCCCCGCATCTCTAAGATGACATCCACATTGGCTCGCAGGCTGGCAAGCTCAGTTTTGATAGCAGTGAAGTCTCTAGTAGGGGCTGGTCATGCTAGAACATGCAGCTCAAAATCGTCAAGACATTTGTGAACCGTCTGAATTTGTTGCTCGGTCTAGTTGGCCACCTGCTTCTCTATGTGGTCCTCTGCCTCCGCTATGGACTTTTGCATTCACGACTGTATGTGATGGAATAGGGTGTCCATATGCGCCTCTAGCTTTTGGACTCTAGCTAGAGGGATCACTGCGGCGGCTGGTGGTGTGGACCTACACAAGCTGAGGGCCCTCCAGGCTGTATGTGAGGAGGATGCCAGGGTTGGGTCGCCCTGCTCAGGTGCAATAGGGTCTGTCCCTTGAGCTAGCTCTACTGTATCTGCACGATTTTCTCCCAATCGGGAAACGTCAACCCGGGGCCCTTTGCTGGGTACTTCTCATTAGTATAATTTACGATGAGGCTATATACAATGTCCCAGTAGGTCTTTGAGTGTTTCATAGTGCCAGATTAGCACTCCGACGTTTCTGCACATCTGTAAGATAACACACAAAAAAGGGTGAGTAGTGGAGGTGTTGAACACCCTCTCACGTATCTCTGTTAAAAATTATCCGTGCAAAGTCTATCTTCAACCTAGTTACCAATGGTGCCACCATAACCTCCCTATCCGAAGTAATTACATTATCGGCCTTTGTGGGCGATACTCGATGTGGGACCAACATCCAAGAAAATTTAGCCACAAAAGTGAGCATAGCCTTCTTGATGAGCCCTCGGGGTTCTATTACCCAGTCAGCCCTCTCCCCATATGCTGCAATATACCGAGCTAGACATAGTTTCACCGCCTCCTTCTTAGTGGCACTCCTTTGAAATTCGCCATCCCGTACTATGTGTCACATGTAATCGTATTCTGCGATATTGATGCTTGAGGTTTTACCTGTGGTGTCCGTATAGGAATTTATGGATGATGGCTTGTGAGATGTCCATCCAACATCCCCAAACCATTGTGAAAGTAAGGGGGTGCATTTTTGCGGGTTTTGACCGCTTTTGGATAGACCCTCGGAGAGTAGCAACATAGGAGGCATATAACTCCCAAACAACCTCCTCTCTATATGTTTCCAAGTTCTGAGCCATCCAATCACACTTGGGGATATCAACGAGTTGGTGCAGCTTTGGACTGTATAGGGACTTCTTGTGAGGACTCAACGCTTCTTAGTAACAAGCCGAGTCATCACCCCTTCTCATTTAGCATCTTATCATATCTATACACTTGCCATTTCCCCTCCACGAACCACCTGTTTGGTTCATCTTCAACCGGAGTGGGTCATCTTTTCGGGGTGCATGTGTATCTCTCGAGCTGGTGGCCTCATTAAATGAGGCTTGTTAACTTCATCTCCTGATCTGGAGGCTCCCTAAGAGTTGAAACCAGATGTAGTGGCTGACTTAGACCTTGAGGATTGGTCTGACCCTGATTGTTAAGCGTTTGGTTACTCGGAGTCGAATGGTGTACCGATTAGTGTGCGCTCCTCATTAAGCTGAGAGGCAGTGACTATGTCAGGGTTCACCTTCCGAGGGGTGCCCCTAGTGGCTCAGGATAATGCTGTTGGTGTTTAAGTGCCTAGAGGACATAGTATGGATCATTCTTTATGTCTCTGTCTTCGTCGATCAACCAATAAGATGGGGCACACGACCTGGATTTGCCCCTCTTTGAGTAGACCACTTACTTGTTTGGGGCCATTGTACATGTGGAGCAATTGTTAATATCATAGCATATTAATAAAACACTCGATGAACAACAAAAAAAACAAAATACGAAAACAAAACTCTTGATTGCAGGTTTAGTTCAATGAGACCCATCAAGACTAGAGTGATCCACAATCTGTAAAACCCGTTCGTAGTTTGTAAAGGTAAAGATATACTCTTTGATGGAGACAAAAGATGTATAGAACGGATTGTCAATCAATCGATGGACAGTAGTTGACATTCATCATTTGACACTTAAGATCATTTTAGGCATGACAATCGACGGACCCAATCGACAGCCTGGCGAGTGAACGATTGTTCGTACGGGGTCGCATACTTGAGGTATGTGACAATTTCAGGCCCGTTTCAATTTCAAGTTTTGAGTTTCTTTTAACATTAATTAATTCTAAACCATCTTTTCAATATTTTATGCTAGTTCATCGTTCATAGGGTTCCAATTCCATACAATTGTCTAACACAATTTGTATAAGGTGTGGAACCCTAGGTCACAACTTACATGTAGACAGAGACACACATGTTTTTTTTTGGAAGTTAAATTGCTACACAACCACTATCAATCATTTCAAGGGATGTACTGCGACTATTACCATGCAAAGTTAATCAATTTAGTCTCAAGGTCAAGACCCACTGTCGACTTCCTATATTCAACTTAGAATGCAAATTCAAAATGTGGGGAAGTCAAATTACCTTACAAGTCATGAAGAGTGTTTGTGATTTTGTGCCTACAATGATGTGCAACCCAAAGAATAACACGACACTTTTGTAACCCGATCACCTGATTGTTTAGGATGAAAAAAGAGAGAATTTGAGAGAGTAAAGGTTGGGATTTGCGGAAAGGGAGGGGGCAGATGATTTTTTGAGTTTTGGTATTGAATTGGAGAGTAATTTAGGGAGGAATTGAATGGGTGGATGATATATCGCGGTTTCACGGTATTATTAATACTTTTTCCTTAAGTTTAGTGTGTCCAAAAGCCTTTTTGTGCTAATTTTTATATAAGTTTCTTTTTATTCTGCAGAAAATCTGTCCAAAGCTGAATGCCGAGATTTTGAGCGAAGAAATGCAGAAGAGACCACCTACGGAGCTTATGACGGTCCGTCGTGCTTGTGACGGTCCGTAGGTGGAAGCGTAGTGCTGCTGCTGAAGGAAGATGGGGAAGTTTGACCAAGTGTGGGGTTACGAAGCTTGTGACGGTCCGTCGTGTCTATGACGGTCCGTCCTGCAGGTTCGTCATGAAGTTTAGAGAAGTAATCCTAGTACCCATATTCCAAGATTTGAAGTGTTTTGGGACGAAGACCCTCG</genome_strand>
        <mrna_strand>GTAATCCTTATACTCAAACTAAAATCACTGTGTGAAAAAGGAGGATTTTGTCTTATAGTGAGGACACTAGTTGCAATACTAGAATTGTTAGCACCTCGGTGAGAAATTGAAGAGGATAGGTGTTAGTGCATGGTAAGTCTGTGTCATATTCTGATCCCACAAAATTCAAACCTAATAGTGATAGCATGCATAGATTTGATGAGATTAATCGGGATTGATAGCCAAATGATTGCAAAGGATAAAACATGGATACTATTGTACAAAGATTGTGTAGTGAGTCATAGTGCGTCGCTTGAGGACAAACAACTAATTTAAGTTGAGGGTGTTGATATACCGTGGTTTCACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTATTAATACTTTTTCCTTAAGCTTAGTGTGTCCAAAAGCCTTTTTGTGCTAATTTTTATATAAGTTACTCTTTGTTTTGCAGGAAATCTGTCCAAAGCTGAATGCGGAGATTTTGAGCGAAGAAATGCAGAAGAAACCACCTACGGAGCTTATGACGGTCCGTCGTGCTTGTGACGGTCCGTAGGTGGAAGCGTAGTGCAGCTGCTGAAGGAAGATAGGGAAGTCTGACTAAGTGTGGGATTACGAAGCTTGTGACGGTCCGTCGTGGATCTGACGGTCCGTCCTGCAGGTTCGTCGTGAAGTTCAGAGAAGTGATCCCAGTACCCAAATTCCAAGAGTTGAAGTGTATTAGAACAAAGACCCTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335935" ref_strand="+" ref_description="SGN-U335935        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 2e-78, score=295)">
      <seq>tcaatgcgaggaagaggatacttgttcttaatagttaccttgttcagttgtctgtagtctatgcacattctaaaacttccatccttcttcttcacaaataaaactggagcaccccaaggagatgcacttggtctaatgaagaccttgctcaacaactcttgaagttgagcctttaactctcttaattcggcgggagccattctataagggggtatagaaatggggcgtgtgcctggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcaggaaacacgtccaaaaactcgcggactaccgaaaccgactcaattgagggtacttgagtagtgtcatccttgagatgtgccaagaaagctgaacaccctttactaaccattttcttagcacgaagaaaggatatgatacgcaccagattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaacgtcaccgttttagcattacaatccaagatcgcaaaatttggagaaagccaagtcatacccagaattacatcaatgtcacccatttctaaaaaaccaaatctacataagtgttgctccccacgaaattcnacaaaacagaactatgtaccttttcaactaccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0049I02.1" temp_strand="-" temp_description="C06HBa0049I02.1  AC216646.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0049I02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="68328" stop="67160"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68028" g_stop="67370" g_length="659"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0049I02.1" gen_strand="-" ref_id="SGN-U335935" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0049I02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335935" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68028" e_stop="67370"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGGGATGCACTTGGTCTAATGAAGCCTTTGTTCAATAACTCTTGAAGTTGTGCCTTTAACTCTCTTAACTCCATGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCGGGTTCAAGATCAATACAGAAGTCAATATCCCTATCCGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGAACCACTGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACATCCTTTACTAATCATTTTCTTAGCACGAAGAAAGGAGACGATGCGGACCGGATTGGAAGTGTAGTCACCCTCCCAAACTAATGGATCTGTCCCAGGTTTGGCTAACGTCACCATTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAAAATTACATCTAAATCATCCATTTCTAAGATAACCAAATCTACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</genome_strand>
        <mrna_strand>TCAATGCGAGGAAGAGGATACTTGTTCTTAATAGTTACCTTGTTCAGTTGTCTGTAGTCTATGCACATTCTAAAACTTCCATCCTTCTTCTTCACAAATAAAACTGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACCTTGCTCAACAACTCTTGAAGTTGAGCCTTTAACTCTCTTAATTCGGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCTGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGAAACACGTCCAAAAACTCGCGGACTACCGAAACCGACTCAATTGAGGGTACTTGAGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTGAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGATATGATACGCACCAGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAATGTCACCCATTTCTAA-AAAACCAAATCTACATAAGTGTTGCTCCCCACGAAATTCNACAAAACAGAACTATGTACCTTTTCAACTACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326740" ref_strand="+" ref_description="SGN-U326740        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: ATMG00860.1 | Symbol: ORF158 | hypothetical protein | chrM:235916-236392 FORWARD | Aliases: ORF158 (evalue: 2e-15, score=79.3) genbank/nr: RNA-directed(evalue: 2e-101, score=370)">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttcaactgccggtagcctatgcacatccgaaaactccaatccttcttctttacaaacaaaaccggagcaccccaaggagatgcagttggtctaatgaagcctttgctcacaactctttgaagtggtcttttaactctcttaactctgcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0049I02.1" temp_strand="-" temp_description="C06HBa0049I02.1  AC216646.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0049I02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="68848" stop="67541"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68548" g_stop="67836" g_length="713"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="712" r_length="712" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0049I02.1" gen_strand="-" ref_id="SGN-U326740" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0049I02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U326740" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68548" e_stop="67836"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCTCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTGGGTCTTACCCAATTCTTCACTGTTTCAATCTTAGAAGGATCCACCATCACTCCTTCCTTAGAAACCACGTGCCCCAAGAAGGACATTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTTAACATTTCCAATACCAATCTCAAATGCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAGGACATCACTACAAATTCGTAAAGCCCATACCTCGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATATTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGGGATGCACTTGGTCTAATGAAGCCTTTGTTCAATAACTC-TTGAAGTTGTGCCTTTAACTCTCTTAACTCCATGG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGCCTATGCACATCCGAAAACTCCAATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCAGTTGGTCTAATGAAGCCTTTGCTC-ACAACTCTTTGAAGTGGT-CTTTTAACTCTCTTAACTCTGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U345909" ref_strand="+" ref_description="SGN-U345909        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 1e-29, score=133)">
      <seq>ctacatctcctaccatacaatgcttcaaatggagccatatcaatgcttgattgatagctattattgtatgaaaactccgctaagggtaggaagctatcccaatgaccaccaaactctatcacacacgcacgaagcatattctccaacacttgaatcgttcgctcagactgaccatcgggagaactagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0049I02.1" temp_strand="-" temp_description="C06HBa0049I02.1  AC216646.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0049I02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="70328" stop="69551"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70028" g_stop="69852" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0049I02.1" gen_strand="-" ref_id="SGN-U345909" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>177</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0049I02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U345909" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70028" e_stop="69852"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACATCTCCTACCATACAATTCTTCGAATGGAGCCATATCAATGCTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATCCTCCAACACTTGAATCGTTCTCTCAGACTGACCATCG</genome_strand>
        <mrna_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGATTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATTCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U339540" ref_strand="+" ref_description="SGN-U339540        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 4e-58, score=228)">
      <seq>agattcgatggagaaagtgaagtctattcaagaaaagcttctagcggcgcaaagtagacaaaaagaatatgcagatcgaaaggttagagacttagagttcatggagggcgaacaagtcttgttgaaagtctcgccaatgaaaggggtgatgcggtttcgtaaaagaggtaagttaagtccaaggtatattggaccatttgaggtactaaagcgagtaggggaggtggcttatgaattagccttacctccagggctgtccggagtacatccggtatttcatgtatccatgttgaaaagataccatggagatggaaactacatcatccgttgggattcagtttcgcttggtgagaattggacttatgaggaggaaccagttgctattttagatagagaggttcgcaagttgaggtcgagagaaattgcatccatcaaagttcaatggaagaatcgaccggttgaagaagctacttgggagaaggaggcagatatgcaagaaaaatacccacatctgtttacagattcaggtactccttttcgccattgtttttcttcatttgatcgttcggggacgaacgatgggtaaattggtatctattgtaacgacctgtttagtcgttttgagcagcagattttaattctggaaaaactggccaagaccacgggcactgcgacggaccgtcacaggcacgacggcccgtcgaaggtgcatcgtttcagcatacttagaatttctgaatttggatatgaaaatcgactctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0049I02.1" temp_strand="+" temp_description="C06HBa0049I02.1  AC216646.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0049I02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="69790" stop="71292"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70089" g_stop="70851" g_length="763"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="763" r_length="763" r_score="0.900"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0049I02.1" gen_strand="+" ref_id="SGN-U339540" ref_strand="+">
        <total_alignment_score>0.900</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0049I02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U339540" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70089" e_stop="70851"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATTCGATAGAGAAAGTGAAGTCCATTCAAGAAAAGCTTCTAGCGGCGCAAAGTAGACAAAAAGAATATGCAAATCGAAAGGTTAGAGACTTAGAGTTCATGGAGGGTGAACAAGTCTTGTTGAAAGTTTCACCCATGAAAGGGGTGATGCGGTTTGGAAAAAGGGGTAAACTAAGTCCAAGGTACATTGGACCATTTGAACTACTTAAGCGAGTAGGGGAGGTGGCTTATGAGTTAGCCTTGCCTCCAGGGCTGTCCGGAGTACACCCGGTATTCCATGTGTCGATGTTGAAAAGATACCATGGGGATGGAAACTACATCATCCGTTGGGATTCAATTTTGCTTGATGAGAACTTGTCTTATGAGGAGGAGCCTGTTGCTATTTTAGATAGAGAAGTTTGCAAGTTGAGGTCAAGAGAGATTGCATCCATCAAGGTGCAATGGAAGAATCGACCCGTTGAAGAAGCCACTTGGGAGAAGGAGGCGGATATGCGAGAAAAATACCCACATCTGTTTACAGATTCAGGTACTCCTTTTTGCCCTTGTTTTCCTTCTTTTGATCGTTTGGGGACGAACGATGGGTAAATTGGTATCTATTGTAACGACCTGTTTAGTCGTTTTGAGCAACAGACTTCAATTCTGGAAAAACTGGCAGAAGCGACGGACCCCACGACGGACCGTCAAGGGCACGACGGACCGTCGCAGG-GTCTCGTTTCAAAACACTTAGAAAATCTGAAATTGGGTACTAAAAATCGACTCTCT</genome_strand>
        <mrna_strand>AGATTCGATGGAGAAAGTGAAGTCTATTCAAGAAAAGCTTCTAGCGGCGCAAAGTAGACAAAAAGAATATGCAGATCGAAAGGTTAGAGACTTAGAGTTCATGGAGGGCGAACAAGTCTTGTTGAAAGTCTCGCCAATGAAAGGGGTGATGCGGTTTCGTAAAAGAGGTAAGTTAAGTCCAAGGTATATTGGACCATTTGAGGTACTAAAGCGAGTAGGGGAGGTGGCTTATGAATTAGCCTTACCTCCAGGGCTGTCCGGAGTACATCCGGTATTTCATGTATCCATGTTGAAAAGATACCATGGAGATGGAAACTACATCATCCGTTGGGATTCAGTTTCGCTTGGTGAGAATTGGACTTATGAGGAGGAACCAGTTGCTATTTTAGATAGAGAGGTTCGCAAGTTGAGGTCGAGAGAAATTGCATCCATCAAAGTTCAATGGAAGAATCGACCGGTTGAAGAAGCTACTTGGGAGAAGGAGGCAGATATGCAAGAAAAATACCCACATCTGTTTACAGATTCAGGTACTCCTTTTCGCCATTGTTTTTCTTCATTTGATCGTTCGGGGACGAACGATGGGTAAATTGGTATCTATTGTAACGACCTGTTTAGTCGTTTTGAGCAGCAGATTTTAATTCTGGAAAAACTGGCCAAGACCACGGGCACTGCGACGGACCGTCACAGGCACGACGGCCCGTCGAAGGTGCATCGTTTCAGCATACTTAGAATTTCTGAATTTGGATA-TGAAAATCGACTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335078" ref_strand="+" ref_description="SGN-U335078        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: hypothetical(evalue: 1e-06, score=56.6)">
      <seq>cctaatctactttgttaataatgatgccttggtataaaagaaggcttgatgaacgaaagtggtgagattaggggatcgggtgccacgttccggtaccaggatagaatatggatcgggtgtcacgttccgacaccaggatagaatatggatcgggtgccacgttccggtaccaggatagaatatggatcgggtgtcacgttccgacaccaggatagaatatggatcgggtgtcacgttctgacaccaggatagaatatggatcgggtgccacgttccggtgccaggatagtatattgaggagtggagtgtcacgtaaggacacgaggggaataaatatgatgaatcttgaaatatgttaatatatgcaatccaatgaactaaattcccaaataagtatgatgaggaggtgtgagtcctcattgatgtgcttggtgatgcaaccaagggttatggtaattgcaaatgctgcatgctaaggatattagttaattttatgatattgcttaatacatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0049I02.1" temp_strand="+" temp_description="C06HBa0049I02.1  AC216646.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0049I02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="71204" stop="72433"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71504" g_stop="71585" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="0.890"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71586" i_stop="71700" i_length="115">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71701" g_stop="72133" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="515" r_length="429" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0049I02.1" gen_strand="+" ref_id="SGN-U335078" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0049I02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335078" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71504" e_stop="71585"/>
          <exon e_start="71701" e_stop="72133"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTAATCTACTTTGTTAATGATGATGCCTT-G---AAAAGAAGGCTTGATGAACGAAAGTGGTGAGATTAGGGGATCGGGTGCCACGTTTCTGTACCAGGATAGAATATATGGATCGGGTGCCACGTTCCGATACCAGGATAGAATATATGGATCGGGTGTCACATTCCGACATCAGGATAGAATATGCATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACTAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATGGATCGGAGTGTCACGTTCCGACACCAGGATAGTATATTGAGGAGCAGAGTGTCACGTACCGACACGAGGGGAATAAAGATAATGAATCTTGAAATATGATAATATATCCAATCTAATGAACTAAATTCCCAAATGAGCATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTATAAATGCTGCATGCTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACT</genome_strand>
        <mrna_strand>CCTAATCTACTTTGTTAATAATGATGCCTTGGTATAAAAGAAGGCTTGATGAACGAAAGTGGTGAGATTAGGGGATCGGGTGCCAC...................................................................................................................GTTCCGGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATAT--GGATCGG-GTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGTCACGTTCTGACACCAGGATAGAATATGGATCGG-GTGCCACGTTCCGGTGCCAGGATAGTATATTGAGGAGTGGAGTGTCACGTAAGGACACGAGGGGAATAAATATGATGAATCTTGAAATATGTTAATATATGCAATCCAATGAACTAAATTCCCAAATAAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGATGCAACCAAGGGTTATGGTAATTGCAAATGCTGCATGCTAAGGATATTAGTTAATTTTATGATATTGCTTAATACATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326212" ref_strand="+" ref_description="SGN-U326212        Tomato 200607 #1 [4 ESTs aligned]">
      <seq>atttttttcattttcaacccgccccgcttacacccccgccccacatatttttttaaatattttctttactagttaagtttgatactaaaaataaaattcataaaaatatattcattttataattaagttgtattgatttaatagataacgactagaagttttattttttagaggtcaatcggcaagacatgcaagaaattgttttagttttgattgaaccatttttacatactatcttgaatattttagcaactttaaagaaactatcttaatagataatgctctatcactcttataaaaatcacttcaaccttccccctcatagccttaaacccgccctggccacgtccgccccgcccattgctatccctagggatatggaaaaattatcttaggtgtcctttataataatccatatgttgcttctttatacacctttgtatgctgtgatcatttctaatattttctagccaacttgttgtctctttctgttcagaatacgaacaaatcatttctggtacatttgtggacctcttttctattctatgtttctctaggtgaatacatatgtaaaaatatcttttgtagatccttattctgctccttatgtttccatcaatgttcttggtagaagtataaacattgttaaagaactgccagacacaagttctataaacaatgttatacatctaacagaccagtccaaactggttctgtcatccttgatgttcatcagtatactgtcactcttttcctatgtttcatggaggactcctgaatttaacaccatggcagttcatacaatttcaaatatctacttcgttgtatcataccaatgtactctcaccacctgcattctactccttaatgtcagattgattggcttctacactctccctcttcccttttgctctcagtcctttctaatctcttaaatatgttgatttggacataattagtgcttctgttttatgataagaatagccctttctaagattctctattttgatgatagattgagtacttggaacgaacttttctgttatggagtttgacaggatattcaattcaactccgtattttttggtcattgtcgaactgaagatatctaggttcaccatagaaaaagaggagagctcttaaaactctagttatttgtatggtgatattgatgttgaggcttccagggagatgatgtcctgctagaacatctcctgcccatttcactggtagggatcaattctaatcttttattgaagcttaattggttttggttcttgttgaccttttggtctctagggttagcaattagaagaagtgtcagggaagagctctggcttgaaatcgtggtatgcggtctgccgatggtcataatgaatcttctagcgggataatccttttaaggaattgggtagagatctctattcttagtaagaagtttgtactgacccctaaagtagtttcgatctcgttccgggagtctgccccatgtcatctcgttctaggagtctgccgcatgtcctctcattctaggagtctgccccatgtcctgtggactatttatcccatgaagtatgtatgagactttagggagcatcgtggactgaggcattttgttgattcaactagtgattgttatttgatttgatgttttcatgtttatacaaaaagtaagaagtgatctttgttcaaagaaatgataggtagaccatgacatggaagtggtctctttctgtctttttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0049I02.1" temp_strand="-" temp_description="C06HBa0049I02.1  AC216646.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0049I02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="120487" stop="118144"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120187" g_stop="118444" g_length="1744"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1745" r_length="1745" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0049I02.1" gen_strand="-" ref_id="SGN-U326212" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1744</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0049I02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U326212" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120187" e_stop="118444"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTTTTCATTTTCAACCCGCCCCGCTTACACCCCCGCCCCACATATTTTTTTAAATATTTTCTTTACTAGTTAAGTTTGATACTAAAAATAAAATTCATAAAAATATATTCATTTTATAATTAAGTTGTATTGATTTAATAGATAACGACTAGAAGTTTTATTTTTTAGAGGTCAATCGGCAAGACATGCAAGAAATTGTTTTAGTTTTGATTGAACCATTTTTACATACTATCTTGAATATTTTAGCAACTTTAAAGAAACTATCTTAATAGATAATGCTCTATCACTCTTATAAAAATCACTTCAACCTTCCCCCTCATAGCCTTAAACCCGCCCTGGCCACGTCCGCCCCGCCCATTGCTATCCCTAGGGATATGGAAAAATTATCTTAGGTGTCCTTTATAATAATCCATATGTTGCTTCTTTATACACCTTTGTATGCTGTGATCATTTCTAATATTTTCTAGCCAACTTGTTGTCTCTTCCTGTTCAGAATACGAACAAATCATTTCTGGTACATTTGTGGACCTCTTTTCTATTCTATGTTTCTCTAGGTGAATACATATGTAAAAATATCTTTTGTAGATCCTTATTCTGCTCCTTATGTTTCCATCAATGTTCTTGGTAGAAGTATAAACATTGTTAAAGAACTGCCAGACACAAGTTCTATAAACAATGTTATACATCTAACAGACCAGTCCAAACTGGTTCTGTCATCCTTGATGTTCATCAGTATACTGTCACTCTTTTCCTATGTTTCATGGAGGACTCCTGAATTTAACACCATGGCAGTTCATACAATTTCAAATATCTACTTCGTTGTATCATACCAATGTACTCTCACCACCTGCATTCTACTCCTTAATGTCAGATTGATTGGCTTCTACACTCTCCCTCTTCCCTTTTGCTCTCAGTCCTTTCTAATCTCTTAAATATGTTGATTTGGACATAATTAGTGCTTCTGTTTTATGATAAGAATAGCCCTTTCTAAGATTCTCTATTTTGATGATAGATTGAGTACTTGGAACGAACTTTTCTGTTATGGAGTTTGACAGGATATTCAATTCAACTCCGTATTTTTTGGTCATTGTCGAACTGAAGATATCTAGGTTCACCATAGAAAAAGAGGAGAGCTCTTAAAACTCTAGTTATTTGTATGGTGATATTGATGTTGAGGCTTCCAGGGAGATGATGTCCTGCTAGAACATCTCCTGCCCATTTCACTGGTAGGGATCAATTCTAATCTTTTATTGAAGCTTAATTGGTTTTGGTTCTTGTTGACCTTTTGGTCTCTAGGGTTAGCAATTAGAAGAAGTGTCAGGGAAGAGCTCTGGCTTGAAATCGTGGTATGCGGTCTGCCGATGGTCATAATGAATCTTCTAGCGGGATAATCCTTTTAAGGAATTGGGTAGAGATCTCTATTCTTAGTAAGAAGTTTGTACTGACCCCTAAAGTAGTTTCGATCTCGTTCCGGGAGTCTGCCCCATGTCATCTCGTTCTAGGAGTCTGCCGCATGTCCTCTCATTCTAGGAGTCTGCCCCATGTCCTGTGGACTATTTATCCCATGAAGTATGTATGAGACTTTAGGGAGCATCGTGGACTGAGGCATTTTGTTGATTCAACTAGTGATTGTTATTTGATTTGATGTTTTCATGTTTATACAAAAAGTAAGAAGTGATCTTTGTTCAAAGAATTGATAGGTAGACCATGACATGGAAGTGGTCTCTTTCTGTC-TTTTACT</genome_strand>
        <mrna_strand>ATTTTTTTCATTTTCAACCCGCCCCGCTTACACCCCCGCCCCACATATTTTTTTAAATATTTTCTTTACTAGTTAAGTTTGATACTAAAAATAAAATTCATAAAAATATATTCATTTTATAATTAAGTTGTATTGATTTAATAGATAACGACTAGAAGTTTTATTTTTTAGAGGTCAATCGGCAAGACATGCAAGAAATTGTTTTAGTTTTGATTGAACCATTTTTACATACTATCTTGAATATTTTAGCAACTTTAAAGAAACTATCTTAATAGATAATGCTCTATCACTCTTATAAAAATCACTTCAACCTTCCCCCTCATAGCCTTAAACCCGCCCTGGCCACGTCCGCCCCGCCCATTGCTATCCCTAGGGATATGGAAAAATTATCTTAGGTGTCCTTTATAATAATCCATATGTTGCTTCTTTATACACCTTTGTATGCTGTGATCATTTCTAATATTTTCTAGCCAACTTGTTGTCTCTTTCTGTTCAGAATACGAACAAATCATTTCTGGTACATTTGTGGACCTCTTTTCTATTCTATGTTTCTCTAGGTGAATACATATGTAAAAATATCTTTTGTAGATCCTTATTCTGCTCCTTATGTTTCCATCAATGTTCTTGGTAGAAGTATAAACATTGTTAAAGAACTGCCAGACACAAGTTCTATAAACAATGTTATACATCTAACAGACCAGTCCAAACTGGTTCTGTCATCCTTGATGTTCATCAGTATACTGTCACTCTTTTCCTATGTTTCATGGAGGACTCCTGAATTTAACACCATGGCAGTTCATACAATTTCAAATATCTACTTCGTTGTATCATACCAATGTACTCTCACCACCTGCATTCTACTCCTTAATGTCAGATTGATTGGCTTCTACACTCTCCCTCTTCCCTTTTGCTCTCAGTCCTTTCTAATCTCTTAAATATGTTGATTTGGACATAATTAGTGCTTCTGTTTTATGATAAGAATAGCCCTTTCTAAGATTCTCTATTTTGATGATAGATTGAGTACTTGGAACGAACTTTTCTGTTATGGAGTTTGACAGGATATTCAATTCAACTCCGTATTTTTTGGTCATTGTCGAACTGAAGATATCTAGGTTCACCATAGAAAAAGAGGAGAGCTCTTAAAACTCTAGTTATTTGTATGGTGATATTGATGTTGAGGCTTCCAGGGAGATGATGTCCTGCTAGAACATCTCCTGCCCATTTCACTGGTAGGGATCAATTCTAATCTTTTATTGAAGCTTAATTGGTTTTGGTTCTTGTTGACCTTTTGGTCTCTAGGGTTAGCAATTAGAAGAAGTGTCAGGGAAGAGCTCTGGCTTGAAATCGTGGTATGCGGTCTGCCGATGGTCATAATGAATCTTCTAGCGGGATAATCCTTTTAAGGAATTGGGTAGAGATCTCTATTCTTAGTAAGAAGTTTGTACTGACCCCTAAAGTAGTTTCGATCTCGTTCCGGGAGTCTGCCCCATGTCATCTCGTTCTAGGAGTCTGCCGCATGTCCTCTCATTCTAGGAGTCTGCCCCATGTCCTGTGGACTATTTATCCCATGAAGTATGTATGAGACTTTAGGGAGCATCGTGGACTGAGGCATTTTGTTGATTCAACTAGTGATTGTTATTTGATTTGATGTTTTCATGTTTATACAAAAAGTAAGAAGTGATCTTTGTTCAAAGAAATGATAGGTAGACCATGACATGGAAGTGGTCTCTTTCTGTCTTTTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U345063" ref_strand="+" ref_description="SGN-U345063        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | KH domain-containing protein, strong similarity to unknown protein (pir::T04533) | chr5:18740346-18743427 REVERSE | Aliases: MCL19.25, MCL19_25(evalue: 3e-63, score=238) genbank/nr: gi|21553916|gb|AAM62999.1| unknown [Arabidopsis thaliana](evalue: 8e-62, score=240)">
      <seq>attcgatgggtgagactggaaaaagatcgcgtagggatgatggggataacaagaaccagaagaggaggacagatagggacgagaaaaacgatgatgagctaatagtttacagaattctgtgtccaaataatgtgattggaagtgttataggaaagaatggaaaagttataaattcaattaggtctgagactaaggcgaaggtcaaggtggtggatccatttccaggtgctaaggatagagttatactcgtttattgctatgtaaaggaaaaggaagatgttgaggttgatcaggatttcaatgagaaacaacctctttgcacggctcaggatgctcttctcaaggtttatacggcaattgcaaatgctttggctgcaattggagaatctgataagaagcggaaggataaagaggagtgtcagcttcttgctccttcaagccagtctgctaatatcattggtaaatctggtaccaccataaagaagctgagaagcaagatgagggccaatattaaagtagttgccagagatgctagtgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0049I02.1" temp_strand="-" temp_description="C06HBa0049I02.1  AC216646.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0049I02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="125590" stop="124451"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125290" g_stop="124751" g_length="540"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="540" r_length="540" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0049I02.1" gen_strand="-" ref_id="SGN-U345063" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0049I02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U345063" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125290" e_stop="124751"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCGATGGGTGAGACTGGAAAAAGATCGCGTAGGGATGATGGGGATAACAAGAACCAGAAGAGGAGGACAGATAGGGACGAGAAAAACGATGATGAGCTAATAGTTTACAGAATTCTGTGTCCAAATAATGTGATTGGAAGTGTTATAGGAAAGAATGGAAAAGTTATAAATTCAATTAGGTCTGAGACTAAGGCGAAGGTCAAGGTGGTGGATCCATTTCCAGGTGCTAAGGATAGAGTTATACTCGTTTATTGCTATGTAAAGGAAAAGGAAGATGTTGAGGTTGATCAGGATTTCAATGAGAAACAACCTCTTTGCACGGCTCAGGATGCTCTTCTCAAGGTTTATACGGCAATTGCAAATGCTTTGGCTGCAATTGGAGAATCTGATAAGAAGCGGAAGGATAAAGAGGAGTGTCAGCTTCTTGCTCCTTCAAGCCAGTCTGCTAATATCATTGGTAAATCTGGTACCACCATAAAGAAGTTGAGAAGCAAGATGAGGGCCAATATTAAAGTAGTTGCCAGAGATGCTAGTGATC</genome_strand>
        <mrna_strand>ATTCGATGGGTGAGACTGGAAAAAGATCGCGTAGGGATGATGGGGATAACAAGAACCAGAAGAGGAGGACAGATAGGGACGAGAAAAACGATGATGAGCTAATAGTTTACAGAATTCTGTGTCCAAATAATGTGATTGGAAGTGTTATAGGAAAGAATGGAAAAGTTATAAATTCAATTAGGTCTGAGACTAAGGCGAAGGTCAAGGTGGTGGATCCATTTCCAGGTGCTAAGGATAGAGTTATACTCGTTTATTGCTATGTAAAGGAAAAGGAAGATGTTGAGGTTGATCAGGATTTCAATGAGAAACAACCTCTTTGCACGGCTCAGGATGCTCTTCTCAAGGTTTATACGGCAATTGCAAATGCTTTGGCTGCAATTGGAGAATCTGATAAGAAGCGGAAGGATAAAGAGGAGTGTCAGCTTCTTGCTCCTTCAAGCCAGTCTGCTAATATCATTGGTAAATCTGGTACCACCATAAAGAAGCTGAGAAGCAAGATGAGGGCCAATATTAAAGTAGTTGCCAGAGATGCTAGTGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U345909" ref_strand="+" ref_description="SGN-U345909        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 1e-29, score=133)">
      <seq>ctacatctcctaccatacaatgcttcaaatggagccatatcaatgcttgattgatagctattattgtatgaaaactccgctaagggtaggaagctatcccaatgaccaccaaactctatcacacacgcacgaagcatattctccaacacttgaatcgttcgctcagactgaccatcgggagaactagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0049I02.1" temp_strand="+" temp_description="C06HBa0049I02.1  AC216646.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0049I02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="131680" stop="132457"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131980" g_stop="132156" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0049I02.1" gen_strand="+" ref_id="SGN-U345909" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>177</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0049I02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U345909" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131980" e_stop="132156"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACATCTCCTACCATACAATTCTTCGAATGGAGCCATATCAATGCTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATCCTCCAACACTTGAATCGTTCTCTCAGACTGACCATCG</genome_strand>
        <mrna_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGATTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATTCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326740" ref_strand="+" ref_description="SGN-U326740        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: ATMG00860.1 | Symbol: ORF158 | hypothetical protein | chrM:235916-236392 FORWARD | Aliases: ORF158 (evalue: 2e-15, score=79.3) genbank/nr: RNA-directed(evalue: 2e-101, score=370)">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttcaactgccggtagcctatgcacatccgaaaactccaatccttcttctttacaaacaaaaccggagcaccccaaggagatgcagttggtctaatgaagcctttgctcacaactctttgaagtggtcttttaactctcttaactctgcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0049I02-vHi5X/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0049I02.1" temp_strand="+" temp_description="C06HBa0049I02.1  AC216646.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0049I02 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="133161" stop="134253"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133461" g_stop="134169" g_length="709"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="712" r_length="712" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0049I02.1" gen_strand="+" ref_id="SGN-U326740" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>709</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0049I02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U326740" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="133461" e_stop="134169"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTGGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTACAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCTTTCTTGCTCTTTGAGTATATCAGTATATCATCAATAAATACGATCACGAAGAGGTCAAAATATGGCTTAAAAATACCATTCATCAAGCTCATGAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACCACAAATTCGTAATGCCCATACCTCGTTCGAAAAGTAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGGTAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAAC---T-GAACAAGTCATCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGAGGATGCACTTGGTCTAATGAAGCCTTTGTTCAATAACTC-TTGAAGTTGTGCCTTTAACTCTCTTAACTCCGCGG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGCCTATGCACATCCGAAAACTCCAATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCAGTTGGTCTAATGAAGCCTTTGCTC-ACAACTCTTTGAAGTGGT-CTTTTAACTCTCTTAACTCTGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>11</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="52416" PGL_stop="53367"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52416" e_stop="53367"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.905"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.905">
            <gDNA_exon_boundary e_start="52416" e_stop="53367" e_length="952"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52416" stop="53367"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U314031" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTCTAAATGAAAGAATTATTAATACATGCAAGACACCATTCTAGAATTGTTATTTTAGTTATGTTTTATCTCATTATTTGCCTATGGTTCCCACAACCCTAGTTATGGAGTTTAGTTACCCACAGTCATAATCACAATATTCAAATATGTTAAATAAGAGTTCATGTACTTACTTCAATGAGAAAGAGTAAACTCCGAAACTTTGCTTGATTAATCACCAAAAATCACCAACAATCAATGATAATCTAAAGTCTAACAATACAGTGTTTTCTAATACAGAGTCTAACAATGATCCAGAGTCTAACCTCATAGAGTCTAACCTCAAAAACTAGGTTTTTTGAACTATTTATAGAAAATAAAAACCTAATTAAACAAGGACTCTATTTGCTGGAAATCTACCAAAACGCGGCTAGGTCGACGGACCTTGCGACGGATCGTCGTGGTCACGATGGACCGTCATGGACTCCGTCGTCTCATACTTATGCAATTTCTTCTGCTGCTCTTCTTCATTACCCTCGACGGCAAGTATGACGGACCATCATAGGCACAACGGTCCGTCGAGGGTCTTCGTCCCAAAACACTTCAAATCTTGGAATATGGGTACTAGGATTACTTCTCTAAACTTCATGACGAACCTGCAGGACGGACCGTCATAGACACGACGGACCGTCACAAGCTTCGTAACCCCACACTTGGTCAAACTTCCCCATCTTCCTTCAGCAGCAGCACTACGCTTCCACCTACGGACCGTCACAAGCACGACGGACCGTCATAAGCTCCGTAGGTGGTCTCTTCTGCATTTCTTCGCTCAAAATCTCGGCATTCAGCTTTGGACAGATTTTCTGCAGAATAAAAAGAAACTTATATAAAAATTAGCACAAAAAGGCTTTTGGACACACTAAACTTAAGGAAAAAGTATTAATAATACCGTGAAACCGCGATATATCATCC</gDNA_template>
            <first_frame> L  L  N  E  R  I  I  N  T  C  K  T  P  F  *  N  C  Y  F  S  Y  V  L  S  H  Y  L  P  M  V  P  T  T  L  V  M  E  F  S  Y  P  Q  S  *  S  Q  Y  S  N  M  L  N  K  S  S  C  T  Y  F  N  E  K  E  *  T  P  K  L  C  L  I  N  H  Q  K  S  P  T  I  N  D  N  L  K  S  N  N  T  V  F  S  N  T  E  S  N  N  D  P  E  S  N  L  I  E  S  N  L  K  N  *  V  F  *  T  I  Y  R  K  *  K  P  N  *  T  R  T  L  F  A  G  N  L  P  K  R  G  *  V  D  G  P  C  D  G  S  S  W  S  R  W  T  V  M  D  S  V  V  S  Y  L  C  N  F  F  C  C  S  S  S  L  P  S  T  A  S  M  T  D  H  H  R  H  N  G  P  S  R  V  F  V  P  K  H  F  K  S  W  N  M  G  T  R  I  T  S  L  N  F  M  T  N  L  Q  D  G  P  S  *  T  R  R  T  V  T  S  F  V  T  P  H  L  V  K  L  P  H  L  P  S  A  A  A  L  R  F  H  L  R  T  V  T  S  T  T  D  R  H  K  L  R  R  W  S  L  L  H  F  F  A  Q  N  L  G  I  Q  L  W  T  D  F  L  Q  N  K  K  K  L  I  *  K  L  A  Q  K  G  F  W  T  H  *  T  *  G  K  S  I  N  N  T  V  K  P  R  Y  I  I  </first_frame>
            <second_frame>  F  *  M  K  E  L  L  I  H  A  R  H  H  S  R  I  V  I  L  V  M  F  Y  L  I  I  C  L  W  F  P  Q  P  *  L  W  S  L  V  T  H  S  H  N  H  N  I  Q  I  C  *  I  R  V  H  V  L  T  S  M  R  K  S  K  L  R  N  F  A  *  L  I  T  K  N  H  Q  Q  S  M  I  I  *  S  L  T  I  Q  C  F  L  I  Q  S  L  T  M  I  Q  S  L  T  S  *  S  L  T  S  K  T  R  F  F  E  L  F  I  E  N  K  N  L  I  K  Q  G  L  Y  L  L  E  I  Y  Q  N  A  A  R  S  T  D  L  A  T  D  R  R  G  H  D  G  P  S  W  T  P  S  S  H  T  Y  A  I  S  S  A  A  L  L  H  Y  P  R  R  Q  V  *  R  T  I  I  G  T  T  V  R  R  G  S  S  S  Q  N  T  S  N  L  G  I  W  V  L  G  L  L  L  *  T  S  *  R  T  C  R  T  D  R  H  R  H  D  G  P  S  Q  A  S  *  P  H  T  W  S  N  F  P  I  F  L  Q  Q  Q  H  Y  A  S  T  Y  G  P  S  Q  A  R  R  T  V  I  S  S  V  G  G  L  F  C  I  S  S  L  K  I  S  A  F  S  F  G  Q  I  F  C  R  I  K  R  N  L  Y  K  N  *  H  K  K  A  F  G  H  T  K  L  K  E  K  V  L  I  I  P  *  N  R  D  I  S  S </second_frame>
            <third_frame>   S  K  *  K  N  Y  *  Y  M  Q  D  T  I  L  E  L  L  F  *  L  C  F  I  S  L  F  A  Y  G  S  H  N  P  S  Y  G  V  *  L  P  T  V  I  I  T  I  F  K  Y  V  K  *  E  F  M  Y  L  L  Q  *  E  R  V  N  S  E  T  L  L  D  *  S  P  K  I  T  N  N  Q  *  *  S  K  V  *  Q  Y  S  V  F  *  Y  R  V  *  Q  *  S  R  V  *  P  H  R  V  *  P  Q  K  L  G  F  L  N  Y  L  *  K  I  K  T  *  L  N  K  D  S  I  C  W  K  S  T  K  T  R  L  G  R  R  T  L  R  R  I  V  V  V  T  M  D  R  H  G  L  R  R  L  I  L  M  Q  F  L  L  L  L  F  F  I  T  L  D  G  K  Y  D  G  P  S  *  A  Q  R  S  V  E  G  L  R  P  K  T  L  Q  I  L  E  Y  G  Y  *  D  Y  F  S  K  L  H  D  E  P  A  G  R  T  V  I  D  T  T  D  R  H  K  L  R  N  P  T  L  G  Q  T  S  P  S  S  F  S  S  S  T  T  L  P  P  T  D  R  H  K  H  D  G  P  S  *  A  P  *  V  V  S  S  A  F  L  R  S  K  S  R  H  S  A  L  D  R  F  S  A  E  *  K  E  T  Y  I  K  I  S  T  K  R  L  L  D  T  L  N  L  R  K  K  Y  *  *  Y  R  E  T  A  I  Y  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0049I02.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52830" stop="53072"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VDGPCDGSSWSRWTVMDSVVSYLCNFFCCSSSLPSTASMTDHHRHNGPSRVFVPKHFKSWNMGTRITSLNFMTNLQDGPS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0049I02.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52729" stop="52947"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLTSKTRFFELFIENKNLIKQGLYLLEIYQNAARSTDLATDRRGHDGPSWTPSSHTYAISSAALLHYPRRQV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0049I02.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53073" stop="53285"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TRRTVTSFVTPHLVKLPHLPSAAALRFHLRTVTSTTDRHKLRRWSLLHFFAQNLGIQLWTDFLQNKKKLI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="64049" PGL_stop="52975"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64049" e_stop="63705"/>
            <exon e_start="53344" e_stop="52975"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.730" acc_prob="0.000" e_score="0.884"/>
          <exon-only e_score="0.930"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.884">
            <gDNA_exon_boundary e_start="64049" e_stop="63705" e_length="345"/>
          </exon>
          <intron i_serial="1" don_prob="0.730" acc_prob="0.000">
            <gDNA_intron_boundary i_start="63704" i_stop="53345" i_length="10360"/>
          </intron>
          <exon e_serial="2" e_score="0.930">
            <gDNA_exon_boundary e_start="53344" e_stop="52975" e_length="370"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64049" stop="63705"/>
              <exon start="53344" stop="52975"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334737" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTAATCCTTATACTCAAACTGAAATCATTGTGTGAAAAATGAGGATATTGTTTTGAAGTGAGGACACTAGTCGCAATACTGGAAATATTAGCACCTCGGTGAGAAATTGAAGAGGACAAGTGTTAGTGCATGGTGAATCTTTGTCATGGTCTAATTCCACATAATTCAAGCCTAATAGTGATAACATGCATAAATATGATGAGACTGATCGGGATTGATAGCCAAATTATTGTGAAAGATAAAACATGGATACTATTGTACAAAGATTTTGTATTGAGTCATAGTGCGTCGCTTAGGACAAACAACGAATTTATGTTGAGGGTGTTGATATACCATGGTTTCATG : GTATTATTAATACTTTTTCCTTAAGTTTAGTGTGTCCAAAAGCCTTTTTGTGCTAATTTTTATATAAGTTTCTTTTTATTCTGCAGAAAATCTGTCCAAAGCTGAATGCCGAGATTTTGAGCGAAGAAATGCAGAAGAGACCACCTACGGAGCTTATGACGGTCCGTCGTGCTTGTGACGGTCCGTAGGTGGAAGCGTAGTGCTGCTGCTGAAGGAAGATGGGGAAGTTTGACCAAGTGTGGGGTTACGAAGCTTGTGACGGTCCGTCGTGTCTATGACGGTCCGTCCTGCAGGTTCGTCATGAAGTTTAGAGAAGTAATCCTAGTACCCATATTCCAAGATTTGAAGTGTTTTGGGACGAAGACCCTCG</gDNA_template>
            <first_frame> L  I  L  I  L  K  L  K  S  L  C  E  K  *  G  Y  C  F  E  V  R  T  L  V  A  I  L  E  I  L  A  P  R  *  E  I  E  E  D  K  C  *  C  M  V  N  L  C  H  G  L  I  P  H  N  S  S  L  I  V  I  T  C  I  N  M  M  R  L  I  G  I  D  S  Q  I  I  V  K  D  K  T  W  I  L  L  Y  K  D  F  V  L  S  H  S  A  S  L  R  T  N  N  E  F  M  L  R  V  L  I  Y  H  G  F  M  :  V  L  L  I  L  F  P  *  V  *  C  V  Q  K  P  F  C  A  N  F  Y  I  S  F  F  L  F  C  R  K  S  V  Q  S  *  M  P  R  F  *  A  K  K  C  R  R  D  H  L  R  S  L  *  R  S  V  V  L  V  T  V  R  R  W  K  R  S  A  A  A  E  G  R  W  G  S  L  T  K  C  G  V  T  K  L  V  T  V  R  R  V  Y  D  G  P  S  C  R  F  V  M  K  F  R  E  V  I  L  V  P  I  F  Q  D  L  K  C  F  G  T  K  T  L  </first_frame>
            <second_frame>  *  S  L  Y  S  N  *  N  H  C  V  K  N  E  D  I  V  L  K  *  G  H  *  S  Q  Y  W  K  Y  *  H  L  G  E  K  L  K  R  T  S  V  S  A  W  *  I  F  V  M  V  *  F  H  I  I  Q  A  *  *  *  *  H  A  *  I  *  *  D  *  S  G  L  I  A  K  L  L  *  K  I  K  H  G  Y  Y  C  T  K  I  L  Y  *  V  I  V  R  R  L  G  Q  T  T  N  L  C  *  G  C  *  Y  T  M  V  S  W :   Y  Y  *  Y  F  F  L  K  F  S  V  S  K  S  L  F  V  L  I  F  I  *  V  S  F  Y  S  A  E  N  L  S  K  A  E  C  R  D  F  E  R  R  N  A  E  E  T  T  Y  G  A  Y  D  G  P  S  C  L  *  R  S  V  G  G  S  V  V  L  L  L  K  E  D  G  E  V  *  P  S  V  G  L  R  S  L  *  R  S  V  V  S  M  T  V  R  P  A  G  S  S  *  S  L  E  K  *  S  *  Y  P  Y  S  K  I  *  S  V  L  G  R  R  P  S </second_frame>
            <third_frame>   N  P  Y  T  Q  T  E  I  I  V  *  K  M  R  I  L  F  *  S  E  D  T  S  R  N  T  G  N  I  S  T  S  V  R  N  *  R  G  Q  V  L  V  H  G  E  S  L  S  W  S  N  S  T  *  F  K  P  N  S  D  N  M  H  K  Y  D  E  T  D  R  D  *  *  P  N  Y  C  E  R  *  N  M  D  T  I  V  Q  R  F  C  I  E  S  *  C  V  A  *  D  K  Q  R  I  Y  V  E  G  V  D  I  P  W  F  H   : G  I  I  N  T  F  S  L  S  L  V  C  P  K  A  F  L  C  *  F  L  Y  K  F  L  F  I  L  Q  K  I  C  P  K  L  N  A  E  I  L  S  E  E  M  Q  K  R  P  P  T  E  L  M  T  V  R  R  A  C  D  G  P  *  V  E  A  *  C  C  C  *  R  K  M  G  K  F  D  Q  V  W  G  Y  E  A  C  D  G  P  S  C  L  *  R  S  V  L  Q  V  R  H  E  V  *  R  S  N  P  S  T  H  I  P  R  F  E  V  F  W  D  E  D  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0049I02.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="63923" stop="63705"/>
                    <exon start="53344" stop="53321"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CMVNLCHGLIPHNSSLIVITCINMMRLIGIDSQIIVKDKTWILLYKDFVLSHSASLRTNNEFMLRVLIYHGFMVLLILFP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0049I02.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53185" stop="52976"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSVVLVTVRRWKRSAAAEGRWGSLTKCGVTKLVTVRRVYDGPSCRFVMKFREVILVPIFQDLKCFGTKTL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="68548" PGL_stop="67370"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68548" e_stop="67370"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.923"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.923">
            <gDNA_exon_boundary e_start="68548" e_stop="67370" e_length="1179"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68548" stop="67836"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326740" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68028" stop="67370"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335935" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAATCTCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTGGGTCTTACCCAATTCTTCACTGTTTCAATCTTAGAAGGATCCACCATCACTCCTTCCTTAGAAACCACGTGCCCCAAGAAGGACATTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTTAACATTTCCAATACCAATCTCAAATGCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAGGACATCACTACAAATTCGTAAAGCCCATACCTCGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATATTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGGGATGCACTTGGTCTAATGAAGCCTTTGTTCAATAACTCTTGAAGTTGTGCCTTTAACTCTCTTAACTCCATGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCGGGTTCAAGATCAATACAGAAGTCAATATCCCTATCCGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGAACCACTGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACATCCTTTACTAATCATTTTCTTAGCACGAAGAAAGGAGACGATGCGGACCGGATTGGAAGTGTAGTCACCCTCCCAAACTAATGGATCTGTCCCAGGTTTGGCTAACGTCACCATTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAAAATTACATCTAAATCATCCATTTCTAAGATAACCAAATCTACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</gDNA_template>
            <first_frame> E  S  L  D  K  S  A  V  V  A  S  *  P  N  K  A  P  Y  F  *  H  I  S  G  S  Y  P  I  L  H  C  F  N  L  R  R  I  H  H  H  S  F  L  R  N  H  V  P  Q  E  G  H  C  I  *  P  K  L  T  L  R  E  L  G  I  K  L  F  L  P  *  H  F  Q  Y  Q  S  Q  M  L  F  M  F  L  L  A  L  *  V  Y  Q  Y  I  I  N  K  Y  D  H  E  E  V  Q  I  W  L  K  N  P  V  H  Q  A  H  E  R  S  R  G  I  R  K  T  K  G  H  H  Y  K  F  V  K  P  I  P  R  S  K  S  S  L  W  H  I  R  C  P  Y  F  Q  L  M  I  T  G  S  Q  V  N  I  R  E  D  T  S  T  L  *  L  I  E  Q  V  I  N  A  G  K  R  I  L  V  L  Y  G  Y  L  V  *  L  S  V  V  Y  T  H  S  K  T  P  I  L  L  L  Y  K  Q  N  R  S  T  P  R  G  C  T  W  S  N  E  A  F  V  Q  *  L  L  K  L  C  L  *  L  S  *  L  H  G  S  H  S  I  R  G  Y  R  N  G  A  S  T  G  F  K  I  N  T  E  V  N  I  P  I  R  W  H  T  R  K  I  C  R  E  H  I  Q  K  L  T  N  H  *  N  R  L  N  R  R  Y  L  G  S  V  I  L  E  M  C  Q  E  S  *  T  S  F  T  N  H  F  L  S  T  K  K  G  D  D  A  D  R  I  G  S  V  V  T  L  P  N  *  W  I  C  P  R  F  G  *  R  H  H  F  S  I  T  I  Q  D  R  K  L  R  R  K  P  S  H  T  Q  N  Y  I  *  I  I  H  F  *  D  N  Q  I  Y  I  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F </first_frame>
            <second_frame>  N  L  L  T  N  R  R  *  *  L  A  N  P  T  K  L  L  I  S  D  T  L  V  G  L  T  Q  F  F  T  V  S  I  L  E  G  S  T  I  T  P  S  L  E  T  T  C  P  K  K  D  I  A  S  S  Q  N  S  H  L  E  N  L  A  *  S  F  F  S  L  N  I  S  N  T  N  L  K  C  S  S  C  S  F  L  L  F  E  Y  T  N  I  S  S  I  N  T  I  T  K  R  S  K  Y  G  L  K  I  P  F  I  K  L  M  N  A  A  G  A  F  V  R  P  K  D  I  T  T  N  S  *  S  P  Y  L  V  R  K  A  V  F  G  T  S  V  A  R  I  F  N  *  *  *  P  D  L  K  S  I  L  E  K  T  Q  A  P  C  N  *  S  N  K  S  S  M  R  G  R  G  Y  L  F  F  M  V  T  L  F  S  C  L  *  S  I  H  I  R  K  L  P  S  F  F  F  T  N  K  T  G  A  P  Q  G  D  A  L  G  L  M  K  P  L  F  N  N  S  *  S  C  A  F  N  S  L  N  S  M  G  A  I  L  *  G  G  I  E  M  G  R  V  P  G  S  R  S  I  Q  K  S  I  S  L  S  G  G  I  P  G  R  S  A  G  N  T  S  R  N  S  R  T  T  E  T  D  S  I  E  G  T  W  V  V  S  S  L  R  C  A  K  K  A  K  H  P  L  L  I  I  F  L  A  R  R  K  E  T  M  R  T  G  L  E  V  *  S  P  S  Q  T  N  G  S  V  P  G  L  A  N  V  T  I  L  A  L  Q  S  K  I  A  N  C  G  E  S  Q  V  I  P  K  I  T  S  K  S  S  I  S  K  I  T  K  S  T  Y  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F   </second_frame>
            <third_frame>   I  S  *  Q  I  G  G  S  S  *  L  T  Q  Q  S  S  L  F  L  T  H  *  W  V  L  P  N  S  S  L  F  Q  S  *  K  D  P  P  S  L  L  P  *  K  P  R  A  P  R  R  T  L  H  L  A  K  T  H  T  *  R  T  W  H  K  A  F  S  P  L  T  F  P  I  P  I  S  N  A  L  H  V  P  S  C  S  L  S  I  P  I  Y  H  Q  *  I  R  S  R  R  G  P  N  M  A  *  K  S  R  S  S  S  S  *  T  Q  Q  G  H  S  *  D  Q  R  T  S  L  Q  I  R  K  A  H  T  S  F  E  K  Q  S  L  A  H  P  L  P  V  F  S  I  D  D  N  R  I  S  S  Q  Y  *  R  R  H  K  H  L  V  T  D  R  T  S  H  Q  C  G  E  E  D  T  C  S  L  W  L  P  C  L  V  V  C  S  L  Y  T  F  E  N  S  H  P  S  S  L  Q  T  K  P  E  H  P  K  G  M  H  L  V  *  *  S  L  C  S  I  T  L  E  V  V  P  L  T  L  L  T  P  W  E  P  F  Y  K  G  V  *  K  W  G  E  Y  R  V  Q  D  Q  Y  R  S  Q  Y  P  Y  P  V  A  Y  Q  E  D  L  Q  G  T  H  P  E  T  H  E  P  L  K  P  T  Q  S  K  V  L  G  *  C  H  P  *  D  V  P  R  K  L  N  I  L  Y  *  S  F  S  *  H  E  E  R  R  R  C  G  P  D  W  K  C  S  H  P  P  K  L  M  D  L  S  Q  V  W  L  T  S  P  F  *  H  Y  N  P  R  S  Q  I  A  E  K  A  K  S  Y  P  K  L  H  L  N  H  P  F  L  R  *  P  N  L  H  I  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0049I02.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67821" stop="67576"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GGIEMGRVPGSRSIQKSISLSGGIPGRSAGNTSRNSRTTETDSIEGTWVVSSLRCAKKAKHPLLIIFLARRKETMRTGLEV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0049I02.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68284" stop="68045"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VYQYIINKYDHEEVQIWLKNPVHQAHERSRGIRKTKGHHYKFVKPIPRSKSSLWHIRCPYFQLMITGSQVNIREDTSTL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0049I02.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67575" stop="67372"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SPSQTNGSVPGLANVTILALQSKIANCGESQVIPKITSKSSISKITKSTYFFFFFFFFFFFFFFFFFF</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0049I02.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68352" stop="68155"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFFSLNISNTNLKCSSCSFLLFEYTNISSINTITKRSKYGLKIPFIKLMNAAGAFVRPKDITTNS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="70028" PGL_stop="69852"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70028" e_stop="69852"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.972"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.972">
            <gDNA_exon_boundary e_start="70028" e_stop="69852" e_length="177"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70028" stop="69852"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345909" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTACATCTCCTACCATACAATTCTTCGAATGGAGCCATATCAATGCTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATCCTCCAACACTTGAATCGTTCTCTCAGACTGACCATCG</gDNA_template>
            <first_frame> L  H  L  L  P  Y  N  S  S  N  G  A  I  S  M  L  E  *  *  L  L  L  Y  E  N  S  A  K  G  R  K  L  S  Q  *  P  P  N  S  I  T  H  A  R  S  I  S  S  N  T  *  I  V  L  S  D  *  P  S </first_frame>
            <second_frame>  Y  I  S  Y  H  T  I  L  R  M  E  P  Y  Q  C  L  S  D  S  Y  Y  C  M  K  T  P  L  R  V  G  S  Y  P  N  D  H  Q  T  L  S  H  T  H  E  A  Y  P  P  T  L  E  S  F  S  Q  T  D  H   </second_frame>
            <third_frame>   T  S  P  T  I  Q  F  F  E  W  S  H  I  N  A  *  V  I  A  I  I  V  *  K  L  R  *  G  *  E  A  I  P  M  T  T  K  L  Y  H  T  R  T  K  H  I  L  Q  H  L  N  R  S  L  R  L  T  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0049I02.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="70089" PGL_stop="70851"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70089" e_stop="70851"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.900"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.900">
            <gDNA_exon_boundary e_start="70089" e_stop="70851" e_length="763"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70089" stop="70851"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U339540" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGATTCGATAGAGAAAGTGAAGTCCATTCAAGAAAAGCTTCTAGCGGCGCAAAGTAGACAAAAAGAATATGCAAATCGAAAGGTTAGAGACTTAGAGTTCATGGAGGGTGAACAAGTCTTGTTGAAAGTTTCACCCATGAAAGGGGTGATGCGGTTTGGAAAAAGGGGTAAACTAAGTCCAAGGTACATTGGACCATTTGAACTACTTAAGCGAGTAGGGGAGGTGGCTTATGAGTTAGCCTTGCCTCCAGGGCTGTCCGGAGTACACCCGGTATTCCATGTGTCGATGTTGAAAAGATACCATGGGGATGGAAACTACATCATCCGTTGGGATTCAATTTTGCTTGATGAGAACTTGTCTTATGAGGAGGAGCCTGTTGCTATTTTAGATAGAGAAGTTTGCAAGTTGAGGTCAAGAGAGATTGCATCCATCAAGGTGCAATGGAAGAATCGACCCGTTGAAGAAGCCACTTGGGAGAAGGAGGCGGATATGCGAGAAAAATACCCACATCTGTTTACAGATTCAGGTACTCCTTTTTGCCCTTGTTTTCCTTCTTTTGATCGTTTGGGGACGAACGATGGGTAAATTGGTATCTATTGTAACGACCTGTTTAGTCGTTTTGAGCAACAGACTTCAATTCTGGAAAAACTGGCAGAAGCGACGGACCCCACGACGGACCGTCAAGGGCACGACGGACCGTCGCAGGGTCTCGTTTCAAAACACTTAGAAAATCTGAAATTGGGTACTAAAAATCGACTCTCT</gDNA_template>
            <first_frame> G  F  D  R  E  S  E  V  H  S  R  K  A  S  S  G  A  K  *  T  K  R  I  C  K  S  K  G  *  R  L  R  V  H  G  G  *  T  S  L  V  E  S  F  T  H  E  R  G  D  A  V  W  K  K  G  *  T  K  S  K  V  H  W  T  I  *  T  T  *  A  S  R  G  G  G  L  *  V  S  L  A  S  R  A  V  R  S  T  P  G  I  P  C  V  D  V  E  K  I  P  W  G  W  K  L  H  H  P  L  G  F  N  F  A  *  *  E  L  V  L  *  G  G  A  C  C  Y  F  R  *  R  S  L  Q  V  E  V  K  R  D  C  I  H  Q  G  A  M  E  E  S  T  R  *  R  S  H  L  G  E  G  G  G  Y  A  R  K  I  P  T  S  V  Y  R  F  R  Y  S  F  L  P  L  F  S  F  F  *  S  F  G  D  E  R  W  V  N  W  Y  L  L  *  R  P  V  *  S  F  *  A  T  D  F  N  S  G  K  T  G  R  S  D  G  P  H  D  G  P  S  R  A  R  R  T  V  A  G  S  R  F  K  T  L  R  K  S  E  I  G  Y  *  K  S  T  L  </first_frame>
            <second_frame>  D  S  I  E  K  V  K  S  I  Q  E  K  L  L  A  A  Q  S  R  Q  K  E  Y  A  N  R  K  V  R  D  L  E  F  M  E  G  E  Q  V  L  L  K  V  S  P  M  K  G  V  M  R  F  G  K  R  G  K  L  S  P  R  Y  I  G  P  F  E  L  L  K  R  V  G  E  V  A  Y  E  L  A  L  P  P  G  L  S  G  V  H  P  V  F  H  V  S  M  L  K  R  Y  H  G  D  G  N  Y  I  I  R  W  D  S  I  L  L  D  E  N  L  S  Y  E  E  E  P  V  A  I  L  D  R  E  V  C  K  L  R  S  R  E  I  A  S  I  K  V  Q  W  K  N  R  P  V  E  E  A  T  W  E  K  E  A  D  M  R  E  K  Y  P  H  L  F  T  D  S  G  T  P  F  C  P  C  F  P  S  F  D  R  L  G  T  N  D  G  *  I  G  I  Y  C  N  D  L  F  S  R  F  E  Q  Q  T  S  I  L  E  K  L  A  E  A  T  D  P  T  T  D  R  Q  G  H  D  G  P  S  Q  G  L  V  S  K  H  L  E  N  L  K  L  G  T  K  N  R  L  S </second_frame>
            <third_frame>   I  R  *  R  K  *  S  P  F  K  K  S  F  *  R  R  K  V  D  K  K  N  M  Q  I  E  R  L  E  T  *  S  S  W  R  V  N  K  S  C  *  K  F  H  P  *  K  G  *  C  G  L  E  K  G  V  N  *  V  Q  G  T  L  D  H  L  N  Y  L  S  E  *  G  R  W  L  M  S  *  P  C  L  Q  G  C  P  E  Y  T  R  Y  S  M  C  R  C  *  K  D  T  M  G  M  E  T  T  S  S  V  G  I  Q  F  C  L  M  R  T  C  L  M  R  R  S  L  L  L  F  *  I  E  K  F  A  S  *  G  Q  E  R  L  H  P  S  R  C  N  G  R  I  D  P  L  K  K  P  L  G  R  R  R  R  I  C  E  K  N  T  H  I  C  L  Q  I  Q  V  L  L  F  A  L  V  F  L  L  L  I  V  W  G  R  T  M  G  K  L  V  S  I  V  T  T  C  L  V  V  L  S  N  R  L  Q  F  W  K  N  W  Q  K  R  R  T  P  R  R  T  V  K  G  T  T  D  R  R  R  V  S  F  Q  N  T  *  K  I  *  N  W  V  L  K  I  D  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0049I02.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70090" stop="70674"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>582</number_coding_nucleotides>
                  <number_encoded_amino_acids>194</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DSIEKVKSIQEKLLAAQSRQKEYANRKVRDLEFMEGEQVLLKVSPMKGVMRFGKRGKLSPRYIGPFELLKRVGEVAYELALPPGLSGVHPVFHVSMLKRYHGDGNYIIRWDSILLDENLSYEEEPVAILDREVCKLRSREIASIKVQWKNRPVEEATWEKEADMREKYPHLFTDSGTPFCPCFPSFDRLGTNDG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="71504" PGL_stop="72133"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="71504" e_stop="71585"/>
            <exon e_start="71701" e_stop="72133"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.890"/>
          <exon-only e_score="0.917"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.890">
            <gDNA_exon_boundary e_start="71504" e_stop="71585" e_length="82"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="71586" i_stop="71700" i_length="115"/>
          </intron>
          <exon e_serial="2" e_score="0.917">
            <gDNA_exon_boundary e_start="71701" e_stop="72133" e_length="433"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71504" stop="71585"/>
              <exon start="71701" stop="72133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335078" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTAATCTACTTTGTTAATGATGATGCCTTGAAAAGAAGGCTTGATGAACGAAAGTGGTGAGATTAGGGGATCGGGTGCCAC : GTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACTAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATGGATCGGAGTGTCACGTTCCGACACCAGGATAGTATATTGAGGAGCAGAGTGTCACGTACCGACACGAGGGGAATAAAGATAATGAATCTTGAAATATGATAATATATCCAATCTAATGAACTAAATTCCCAAATGAGCATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTATAAATGCTGCATGCTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACT</gDNA_template>
            <first_frame> P  N  L  L  C  *  *  *  C  L  E  K  K  A  *  *  T  K  V  V  R  L  G  D  R  V  P   : R  S  D  T  R  I  E  Y  G  S  G  A  T  F  R  Y  *  D  R  I  W  I  G  C  H  V  P  V  P  G  *  Y  M  R  I  G  V  S  R  S  D  T  R  I  E  Y  G  S  G  A  T  F  R  Y  Q  D  R  I  W  I  G  V  S  R  S  D  T  R  I  V  Y  *  G  A  E  C  H  V  P  T  R  G  E  *  R  *  *  I  L  K  Y  D  N  I  S  N  L  M  N  *  I  P  K  *  A  *  *  G  G  V  S  P  H  *  C  A  W  C  C  N  Q  G  L  W  *  L  *  M  L  H  A  K  D  I  S  *  F  Y  D  I  A  *  Y  I   </first_frame>
            <second_frame>  L  I  Y  F  V  N  D  D  A  L  K  R  R  L  D  E  R  K  W  *  D  *  G  I  G  C  H  :  V  P  T  P  G  *  N  M  D  R  V  P  R  S  G  T  R  I  E  Y  G  S  G  A  T  F  R  Y  Q  D  S  I  *  G  S  E  C  H  V  P  T  P  G  *  N  M  D  R  V  P  R  S  G  T  R  I  E  Y  G  S  E  C  H  V  P  T  P  G  *  Y  I  E  E  Q  S  V  T  Y  R  H  E  G  N  K  D  N  E  S  *  N  M  I  I  Y  P  I  *  *  T  K  F  P  N  E  H  D  E  E  V  *  V  L  I  D  V  L  G  V  V  T  K  G  Y  G  N  Y  K  C  C  M  L  R  I  L  V  D  F  M  I  L  L  N  T  Y  </second_frame>
            <third_frame>   *  S  T  L  L  M  M  M  P  *  K  E  G  L  M  N  E  S  G  E  I  R  G  S  G  A  T :   F  R  H  Q  D  R  I  W  I  G  C  H  V  P  V  L  G  *  N  M  D  R  V  P  R  S  G  T  R  I  V  Y  E  D  R  S  V  T  F  R  H  Q  D  R  I  W  I  G  C  H  V  P  V  P  G  *  N  M  D  R  S  V  T  F  R  H  Q  D  S  I  L  R  S  R  V  S  R  T  D  T  R  G  I  K  I  M  N  L  E  I  *  *  Y  I  Q  S  N  E  L  N  S  Q  M  S  M  M  R  R  C  E  S  S  L  M  C  L  V  L  *  P  R  V  M  V  T  I  N  A  A  C  *  G  Y  *  L  I  L  *  Y  C  L  I  H  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0049I02.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="120187" PGL_stop="118444"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="120187" e_stop="118444"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="120187" e_stop="118444" e_length="1744"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120187" stop="118444"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326212" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTTTTTCATTTTCAACCCGCCCCGCTTACACCCCCGCCCCACATATTTTTTTAAATATTTTCTTTACTAGTTAAGTTTGATACTAAAAATAAAATTCATAAAAATATATTCATTTTATAATTAAGTTGTATTGATTTAATAGATAACGACTAGAAGTTTTATTTTTTAGAGGTCAATCGGCAAGACATGCAAGAAATTGTTTTAGTTTTGATTGAACCATTTTTACATACTATCTTGAATATTTTAGCAACTTTAAAGAAACTATCTTAATAGATAATGCTCTATCACTCTTATAAAAATCACTTCAACCTTCCCCCTCATAGCCTTAAACCCGCCCTGGCCACGTCCGCCCCGCCCATTGCTATCCCTAGGGATATGGAAAAATTATCTTAGGTGTCCTTTATAATAATCCATATGTTGCTTCTTTATACACCTTTGTATGCTGTGATCATTTCTAATATTTTCTAGCCAACTTGTTGTCTCTTCCTGTTCAGAATACGAACAAATCATTTCTGGTACATTTGTGGACCTCTTTTCTATTCTATGTTTCTCTAGGTGAATACATATGTAAAAATATCTTTTGTAGATCCTTATTCTGCTCCTTATGTTTCCATCAATGTTCTTGGTAGAAGTATAAACATTGTTAAAGAACTGCCAGACACAAGTTCTATAAACAATGTTATACATCTAACAGACCAGTCCAAACTGGTTCTGTCATCCTTGATGTTCATCAGTATACTGTCACTCTTTTCCTATGTTTCATGGAGGACTCCTGAATTTAACACCATGGCAGTTCATACAATTTCAAATATCTACTTCGTTGTATCATACCAATGTACTCTCACCACCTGCATTCTACTCCTTAATGTCAGATTGATTGGCTTCTACACTCTCCCTCTTCCCTTTTGCTCTCAGTCCTTTCTAATCTCTTAAATATGTTGATTTGGACATAATTAGTGCTTCTGTTTTATGATAAGAATAGCCCTTTCTAAGATTCTCTATTTTGATGATAGATTGAGTACTTGGAACGAACTTTTCTGTTATGGAGTTTGACAGGATATTCAATTCAACTCCGTATTTTTTGGTCATTGTCGAACTGAAGATATCTAGGTTCACCATAGAAAAAGAGGAGAGCTCTTAAAACTCTAGTTATTTGTATGGTGATATTGATGTTGAGGCTTCCAGGGAGATGATGTCCTGCTAGAACATCTCCTGCCCATTTCACTGGTAGGGATCAATTCTAATCTTTTATTGAAGCTTAATTGGTTTTGGTTCTTGTTGACCTTTTGGTCTCTAGGGTTAGCAATTAGAAGAAGTGTCAGGGAAGAGCTCTGGCTTGAAATCGTGGTATGCGGTCTGCCGATGGTCATAATGAATCTTCTAGCGGGATAATCCTTTTAAGGAATTGGGTAGAGATCTCTATTCTTAGTAAGAAGTTTGTACTGACCCCTAAAGTAGTTTCGATCTCGTTCCGGGAGTCTGCCCCATGTCATCTCGTTCTAGGAGTCTGCCGCATGTCCTCTCATTCTAGGAGTCTGCCCCATGTCCTGTGGACTATTTATCCCATGAAGTATGTATGAGACTTTAGGGAGCATCGTGGACTGAGGCATTTTGTTGATTCAACTAGTGATTGTTATTTGATTTGATGTTTTCATGTTTATACAAAAAGTAAGAAGTGATCTTTGTTCAAAGAATTGATAGGTAGACCATGACATGGAAGTGGTCTCTTTCTGTCTTTTACT</gDNA_template>
            <first_frame> I  F  F  I  F  N  P  P  R  L  H  P  R  P  T  Y  F  F  K  Y  F  L  Y  *  L  S  L  I  L  K  I  K  F  I  K  I  Y  S  F  Y  N  *  V  V  L  I  *  *  I  T  T  R  S  F  I  F  *  R  S  I  G  K  T  C  K  K  L  F  *  F  *  L  N  H  F  Y  I  L  S  *  I  F  *  Q  L  *  R  N  Y  L  N  R  *  C  S  I  T  L  I  K  I  T  S  T  F  P  L  I  A  L  N  P  P  W  P  R  P  P  R  P  L  L  S  L  G  I  W  K  N  Y  L  R  C  P  L  *  *  S  I  C  C  F  F  I  H  L  C  M  L  *  S  F  L  I  F  S  S  Q  L  V  V  S  S  C  S  E  Y  E  Q  I  I  S  G  T  F  V  D  L  F  S  I  L  C  F  S  R  *  I  H  M  *  K  Y  L  L  *  I  L  I  L  L  L  M  F  P  S  M  F  L  V  E  V  *  T  L  L  K  N  C  Q  T  Q  V  L  *  T  M  L  Y  I  *  Q  T  S  P  N  W  F  C  H  P  *  C  S  S  V  Y  C  H  S  F  P  M  F  H  G  G  L  L  N  L  T  P  W  Q  F  I  Q  F  Q  I  S  T  S  L  Y  H  T  N  V  L  S  P  P  A  F  Y  S  L  M  S  D  *  L  A  S  T  L  S  L  F  P  F  A  L  S  P  F  *  S  L  K  Y  V  D  L  D  I  I  S  A  S  V  L  *  *  E  *  P  F  L  R  F  S  I  L  M  I  D  *  V  L  G  T  N  F  S  V  M  E  F  D  R  I  F  N  S  T  P  Y  F  L  V  I  V  E  L  K  I  S  R  F  T  I  E  K  E  E  S  S  *  N  S  S  Y  L  Y  G  D  I  D  V  E  A  S  R  E  M  M  S  C  *  N  I  S  C  P  F  H  W  *  G  S  I  L  I  F  Y  *  S  L  I  G  F  G  S  C  *  P  F  G  L  *  G  *  Q  L  E  E  V  S  G  K  S  S  G  L  K  S  W  Y  A  V  C  R  W  S  *  *  I  F  *  R  D  N  P  F  K  E  L  G  R  D  L  Y  S  *  *  E  V  C  T  D  P  *  S  S  F  D  L  V  P  G  V  C  P  M  S  S  R  S  R  S  L  P  H  V  L  S  F  *  E  S  A  P  C  P  V  D  Y  L  S  H  E  V  C  M  R  L  *  G  A  S  W  T  E  A  F  C  *  F  N  *  *  L  L  F  D  L  M  F  S  C  L  Y  K  K  *  E  V  I  F  V  Q  R  I  D  R  *  T  M  T  W  K  W  S  L  S  V  F  Y  </first_frame>
            <second_frame>  F  F  S  F  S  T  R  P  A  Y  T  P  A  P  H  I  F  L  N  I  F  F  T  S  *  V  *  Y  *  K  *  N  S  *  K  Y  I  H  F  I  I  K  L  Y  *  F  N  R  *  R  L  E  V  L  F  F  R  G  Q  S  A  R  H  A  R  N  C  F  S  F  D  *  T  I  F  T  Y  Y  L  E  Y  F  S  N  F  K  E  T  I  L  I  D  N  A  L  S  L  L  *  K  S  L  Q  P  S  P  S  *  P  *  T  R  P  G  H  V  R  P  A  H  C  Y  P  *  G  Y  G  K  I  I  L  G  V  L  Y  N  N  P  Y  V  A  S  L  Y  T  F  V  C  C  D  H  F  *  Y  F  L  A  N  L  L  S  L  P  V  Q  N  T  N  K  S  F  L  V  H  L  W  T  S  F  L  F  Y  V  S  L  G  E  Y  I  C  K  N  I  F  C  R  S  L  F  C  S  L  C  F  H  Q  C  S  W  *  K  Y  K  H  C  *  R  T  A  R  H  K  F  Y  K  Q  C  Y  T  S  N  R  P  V  Q  T  G  S  V  I  L  D  V  H  Q  Y  T  V  T  L  F  L  C  F  M  E  D  S  *  I  *  H  H  G  S  S  Y  N  F  K  Y  L  L  R  C  I  I  P  M  Y  S  H  H  L  H  S  T  P  *  C  Q  I  D  W  L  L  H  S  P  S  S  L  L  L  S  V  L  S  N  L  L  N  M  L  I  W  T  *  L  V  L  L  F  Y  D  K  N  S  P  F  *  D  S  L  F  *  *  *  I  E  Y  L  E  R  T  F  L  L  W  S  L  T  G  Y  S  I  Q  L  R  I  F  W  S  L  S  N  *  R  Y  L  G  S  P  *  K  K  R  R  A  L  K  T  L  V  I  C  M  V  I  L  M  L  R  L  P  G  R  *  C  P  A  R  T  S  P  A  H  F  T  G  R  D  Q  F  *  S  F  I  E  A  *  L  V  L  V  L  V  D  L  L  V  S  R  V  S  N  *  K  K  C  Q  G  R  A  L  A  *  N  R  G  M  R  S  A  D  G  H  N  E  S  S  S  G  I  I  L  L  R  N  W  V  E  I  S  I  L  S  K  K  F  V  L  T  P  K  V  V  S  I  S  F  R  E  S  A  P  C  H  L  V  L  G  V  C  R  M  S  S  H  S  R  S  L  P  H  V  L  W  T  I  Y  P  M  K  Y  V  *  D  F  R  E  H  R  G  L  R  H  F  V  D  S  T  S  D  C  Y  L  I  *  C  F  H  V  Y  T  K  S  K  K  *  S  L  F  K  E  L  I  G  R  P  *  H  G  S  G  L  F  L  S  F  T </second_frame>
            <third_frame>   F  F  H  F  Q  P  A  P  L  T  P  P  P  H  I  F  F  *  I  F  S  L  L  V  K  F  D  T  K  N  K  I  H  K  N  I  F  I  L  *  L  S  C  I  D  L  I  D  N  D  *  K  F  Y  F  L  E  V  N  R  Q  D  M  Q  E  I  V  L  V  L  I  E  P  F  L  H  T  I  L  N  I  L  A  T  L  K  K  L  S  *  *  I  M  L  Y  H  S  Y  K  N  H  F  N  L  P  P  H  S  L  K  P  A  L  A  T  S  A  P  P  I  A  I  P  R  D  M  E  K  L  S  *  V  S  F  I  I  I  H  M  L  L  L  Y  T  P  L  Y  A  V  I  I  S  N  I  F  *  P  T  C  C  L  F  L  F  R  I  R  T  N  H  F  W  Y  I  C  G  P  L  F  Y  S  M  F  L  *  V  N  T  Y  V  K  I  S  F  V  D  P  Y  S  A  P  Y  V  S  I  N  V  L  G  R  S  I  N  I  V  K  E  L  P  D  T  S  S  I  N  N  V  I  H  L  T  D  Q  S  K  L  V  L  S  S  L  M  F  I  S  I  L  S  L  F  S  Y  V  S  W  R  T  P  E  F  N  T  M  A  V  H  T  I  S  N  I  Y  F  V  V  S  Y  Q  C  T  L  T  T  C  I  L  L  L  N  V  R  L  I  G  F  Y  T  L  P  L  P  F  C  S  Q  S  F  L  I  S  *  I  C  *  F  G  H  N  *  C  F  C  F  M  I  R  I  A  L  S  K  I  L  Y  F  D  D  R  L  S  T  W  N  E  L  F  C  Y  G  V  *  Q  D  I  Q  F  N  S  V  F  F  G  H  C  R  T  E  D  I  *  V  H  H  R  K  R  G  E  L  L  K  L  *  L  F  V  W  *  Y  *  C  *  G  F  Q  G  D  D  V  L  L  E  H  L  L  P  I  S  L  V  G  I  N  S  N  L  L  L  K  L  N  W  F  W  F  L  L  T  F  W  S  L  G  L  A  I  R  R  S  V  R  E  E  L  W  L  E  I  V  V  C  G  L  P  M  V  I  M  N  L  L  A  G  *  S  F  *  G  I  G  *  R  S  L  F  L  V  R  S  L  Y  *  P  L  K  *  F  R  S  R  S  G  S  L  P  H  V  I  S  F  *  E  S  A  A  C  P  L  I  L  G  V  C  P  M  S  C  G  L  F  I  P  *  S  M  Y  E  T  L  G  S  I  V  D  *  G  I  L  L  I  Q  L  V  I  V  I  *  F  D  V  F  M  F  I  Q  K  V  R  S  D  L  C  S  K  N  *  *  V  D  H  D  M  E  V  V  S  F  C  L  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0049I02.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="119630" stop="119253"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>375</number_coding_nucleotides>
                  <number_encoded_amino_acids>125</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VNTYVKISFVDPYSAPYVSINVLGRSINIVKELPDTSSINNVIHLTDQSKLVLSSLMFISILSLFSYVSWRTPEFNTMAVHTISNIYFVVSYQCTLTTCILLLNVRLIGFYTLPLPFCSQSFLIS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0049I02.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="118845" stop="118606"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NRGMRSADGHNESSSGIILLRNWVEISILSKKFVLTPKVVSISFRESAPCHLVLGVCRMSSHSRSLPHVLWTIYPMKYV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="125290" PGL_stop="124751"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="125290" e_stop="124751"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="125290" e_stop="124751" e_length="540"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125290" stop="124751"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345063" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTCGATGGGTGAGACTGGAAAAAGATCGCGTAGGGATGATGGGGATAACAAGAACCAGAAGAGGAGGACAGATAGGGACGAGAAAAACGATGATGAGCTAATAGTTTACAGAATTCTGTGTCCAAATAATGTGATTGGAAGTGTTATAGGAAAGAATGGAAAAGTTATAAATTCAATTAGGTCTGAGACTAAGGCGAAGGTCAAGGTGGTGGATCCATTTCCAGGTGCTAAGGATAGAGTTATACTCGTTTATTGCTATGTAAAGGAAAAGGAAGATGTTGAGGTTGATCAGGATTTCAATGAGAAACAACCTCTTTGCACGGCTCAGGATGCTCTTCTCAAGGTTTATACGGCAATTGCAAATGCTTTGGCTGCAATTGGAGAATCTGATAAGAAGCGGAAGGATAAAGAGGAGTGTCAGCTTCTTGCTCCTTCAAGCCAGTCTGCTAATATCATTGGTAAATCTGGTACCACCATAAAGAAGTTGAGAAGCAAGATGAGGGCCAATATTAAAGTAGTTGCCAGAGATGCTAGTGATC</gDNA_template>
            <first_frame> I  R  W  V  R  L  E  K  D  R  V  G  M  M  G  I  T  R  T  R  R  G  G  Q  I  G  T  R  K  T  M  M  S  *  *  F  T  E  F  C  V  Q  I  M  *  L  E  V  L  *  E  R  M  E  K  L  *  I  Q  L  G  L  R  L  R  R  R  S  R  W  W  I  H  F  Q  V  L  R  I  E  L  Y  S  F  I  A  M  *  R  K  R  K  M  L  R  L  I  R  I  S  M  R  N  N  L  F  A  R  L  R  M  L  F  S  R  F  I  R  Q  L  Q  M  L  W  L  Q  L  E  N  L  I  R  S  G  R  I  K  R  S  V  S  F  L  L  L  Q  A  S  L  L  I  S  L  V  N  L  V  P  P  *  R  S  *  E  A  R  *  G  P  I  L  K  *  L  P  E  M  L  V  I </first_frame>
            <second_frame>  F  D  G  *  D  W  K  K  I  A  *  G  *  W  G  *  Q  E  P  E  E  E  D  R  *  G  R  E  K  R  *  *  A  N  S  L  Q  N  S  V  S  K  *  C  D  W  K  C  Y  R  K  E  W  K  S  Y  K  F  N  *  V  *  D  *  G  E  G  Q  G  G  G  S  I  S  R  C  *  G  *  S  Y  T  R  L  L  L  C  K  G  K  G  R  C  *  G  *  S  G  F  Q  *  E  T  T  S  L  H  G  S  G  C  S  S  Q  G  L  Y  G  N  C  K  C  F  G  C  N  W  R  I  *  *  E  A  E  G  *  R  G  V  S  A  S  C  S  F  K  P  V  C  *  Y  H  W  *  I  W  Y  H  H  K  E  V  E  K  Q  D  E  G  Q  Y  *  S  S  C  Q  R  C  *  *   </second_frame>
            <third_frame>   S  M  G  E  T  G  K  R  S  R  R  D  D  G  D  N  K  N  Q  K  R  R  T  D  R  D  E  K  N  D  D  E  L  I  V  Y  R  I  L  C  P  N  N  V  I  G  S  V  I  G  K  N  G  K  V  I  N  S  I  R  S  E  T  K  A  K  V  K  V  V  D  P  F  P  G  A  K  D  R  V  I  L  V  Y  C  Y  V  K  E  K  E  D  V  E  V  D  Q  D  F  N  E  K  Q  P  L  C  T  A  Q  D  A  L  L  K  V  Y  T  A  I  A  N  A  L  A  A  I  G  E  S  D  K  K  R  K  D  K  E  E  C  Q  L  L  A  P  S  S  Q  S  A  N  I  I  G  K  S  G  T  T  I  K  K  L  R  S  K  M  R  A  N  I  K  V  V  A  R  D  A  S  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0049I02.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125288" stop="124752"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>537</number_coding_nucleotides>
                  <number_encoded_amino_acids>179</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SMGETGKRSRRDDGDNKNQKRRTDRDEKNDDELIVYRILCPNNVIGSVIGKNGKVINSIRSETKAKVKVVDPFPGAKDRVILVYCYVKEKEDVEVDQDFNEKQPLCTAQDALLKVYTAIANALAAIGESDKKRKDKEECQLLAPSSQSANIIGKSGTTIKKLRSKMRANIKVVARDASD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="131980" PGL_stop="132156"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="131980" e_stop="132156"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.972"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.972">
            <gDNA_exon_boundary e_start="131980" e_stop="132156" e_length="177"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131980" stop="132156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345909" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTACATCTCCTACCATACAATTCTTCGAATGGAGCCATATCAATGCTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATCCTCCAACACTTGAATCGTTCTCTCAGACTGACCATCG</gDNA_template>
            <first_frame> L  H  L  L  P  Y  N  S  S  N  G  A  I  S  M  L  E  *  *  L  L  L  Y  E  N  S  A  K  G  R  K  L  S  Q  *  P  P  N  S  I  T  H  A  R  S  I  S  S  N  T  *  I  V  L  S  D  *  P  S </first_frame>
            <second_frame>  Y  I  S  Y  H  T  I  L  R  M  E  P  Y  Q  C  L  S  D  S  Y  Y  C  M  K  T  P  L  R  V  G  S  Y  P  N  D  H  Q  T  L  S  H  T  H  E  A  Y  P  P  T  L  E  S  F  S  Q  T  D  H   </second_frame>
            <third_frame>   T  S  P  T  I  Q  F  F  E  W  S  H  I  N  A  *  V  I  A  I  I  V  *  K  L  R  *  G  *  E  A  I  P  M  T  T  K  L  Y  H  T  R  T  K  H  I  L  Q  H  L  N  R  S  L  R  L  T  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0049I02.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="133461" PGL_stop="134169"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="133461" e_stop="134169"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.918"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.918">
            <gDNA_exon_boundary e_start="133461" e_stop="134169" e_length="709"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133461" stop="134169"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326740" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTGGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTACAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCTTTCTTGCTCTTTGAGTATATCAGTATATCATCAATAAATACGATCACGAAGAGGTCAAAATATGGCTTAAAAATACCATTCATCAAGCTCATGAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACCACAAATTCGTAATGCCCATACCTCGTTCGAAAAGTAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGGTAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGAACAAGTCATCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGAGGATGCACTTGGTCTAATGAAGCCTTTGTTCAATAACTCTTGAAGTTGTGCCTTTAACTCTCTTAACTCCGCGG</gDNA_template>
            <first_frame> E  S  L  D  K  S  A  V  V  A  S  *  P  N  K  A  P  Y  F  *  H  I  S  R  S  Y  P  I  L  H  C  L  N  L  R  R  I  H  H  H  S  I  L  G  N  H  V  P  Q  E  G  H  C  I  *  P  K  L  T  L  T  E  L  G  I  K  L  F  L  P  Q  H  F  Q  Y  H  S  Q  M  L  L  M  F  F  L  A  L  *  V  Y  Q  Y  I  I  N  K  Y  D  H  E  E  V  K  I  W  L  K  N  T  I  H  Q  A  H  E  R  S  R  G  I  H  K  T  K  R  H  H  H  K  F  V  M  P  I  P  R  S  K  S  S  L  W  H  I  R  C  P  Y  F  Q  L  M  V  T  G  S  Q  V  N  L  R  E  D  T  S  T  L  *  L  N  K  S  S  M  R  G  R  G  Y  L  F  F  M  V  T  L  F  S  C  L  *  S  I  H  I  R  K  L  P  S  F  F  F  T  N  K  T  G  A  P  Q  E  D  A  L  G  L  M  K  P  L  F  N  N  S  *  S  C  A  F  N  S  L  N  S  A  </first_frame>
            <second_frame>  N  P  L  T  N  R  R  *  *  L  A  N  P  T  K  L  L  I  S  D  T  L  V  G  L  T  Q  F  F  T  V  S  I  L  E  G  S  T  I  T  P  S  L  E  T  T  C  P  K  K  D  T  A  S  S  Q  N  S  H  L  Q  N  L  A  *  S  F  F  S  L  N  I  S  N  T  I  L  K  C  S  S  C  S  F  L  L  F  E  Y  I  S  I  S  S  I  N  T  I  T  K  R  S  K  Y  G  L  K  I  P  F  I  K  L  M  N  A  A  G  A  F  I  R  P  K  D  I  T  T  N  S  *  C  P  Y  L  V  R  K  V  V  F  G  T  S  V  A  R  I  F  N  *  W  *  P  D  L  K  S  I  L  E  K  T  Q  A  P  C  N  *  T  S  H  Q  C  G  E  E  D  T  C  S  L  W  L  P  C  L  V  V  C  S  L  Y  T  F  E  N  S  H  P  S  S  L  Q  T  K  P  E  H  P  K  R  M  H  L  V  *  *  S  L  C  S  I  T  L  E  V  V  P  L  T  L  L  T  P  R </second_frame>
            <third_frame>   I  P  *  Q  I  G  G  S  S  *  L  T  Q  Q  S  S  L  F  L  T  H  *  *  V  L  P  N  S  S  L  S  Q  S  *  K  D  P  P  S  L  H  P  W  K  P  R  A  P  R  R  T  L  H  L  A  K  T  H  T  Y  R  T  W  H  K  A  F  S  P  S  T  F  P  I  P  F  S  N  A  P  H  V  L  S  C  S  L  S  I  S  V  Y  H  Q  *  I  R  S  R  R  G  Q  N  M  A  *  K  Y  H  S  S  S  S  *  T  Q  Q  G  H  S  *  D  Q  K  T  S  P  Q  I  R  N  A  H  T  S  F  E  K  *  S  L  A  H  P  L  P  V  F  S  I  D  G  N  R  I  S  S  Q  S  *  R  R  H  K  H  L  V  T  E  Q  V  I  N  A  G  K  R  I  L  V  L  Y  G  Y  L  V  *  L  S  V  V  Y  T  H  S  K  T  P  I  L  L  L  Y  K  Q  N  R  S  T  P  R  G  C  T  W  S  N  E  A  F  V  Q  *  L  L  K  L  C  L  *  L  S  *  L  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0049I02.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="133725" stop="133964"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VYQYIINKYDHEEVKIWLKNTIHQAHERSRGIHKTKRHHHKFVMPIPRSKSSLWHIRCPYFQLMVTGSQVNLREDTSTL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0049I02.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="133657" stop="133854"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFFSLNISNTILKCSSCSFLLFEYISISSINTITKRSKYGLKIPFIKLMNAAGAFIRPKDITTNS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 96 chains have been computed
$ 
$ memory statistics:
$ 23432 bytes spliced alignments in total
$ 11 spliced alignments have been stored
$ 2130 bytes was the average size of a spliced alignment
$ 16176 bytes predicted gene locations in total
$ 10 predicted gene locations have been stored
$ 1617 bytes was the average size of a predicted gene location
$ 4 megabytes was the average size of the backtrace matrix
$ 120 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 17:43:37
-->
