<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 14:33:12"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U319828" ref_strand="+" ref_description="SGN-U319828        Tomato 200607 #1 [12 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr1:8080191-8082864 REVERSE | Aliases: F19G10.23(evalue: 1e-91, score=333) genbank/nr: gi|50902230|ref|XP_463548.1| P0408G07.3 [Oryza sativa (japonica cultivar-group)] (evalue: 2e-92, score=343)">
      <seq>gtagattctacaaagttccgttctttgatggaacacccaacacaaatttcaccattgataacagtcctcaaaacactctgaattaactcagcacaaccttagaacagaagagagaaatcaaaagaaaaaaaggaagtagctttccagttcccctttattcatctgaaatgcccaccattgatttaagcagaacaccttcatgtgtcactctttttccatcttttcaacaaggacccaagattcaattttcccttacaaaatcagctgttaattcgtttctgtatagttttaaacctaaaagatttcatttcttgaaaccatgttcttccctaaaggaaaccaagaaacagcagacccttttgaaaacaccaaacaaatctcctcagagtttcaggagactggttaacttgaaccccaaaaatgatgatggagagagtgagagtgagagggatagtgggtcaggagatgatgataatgctattaaaggtaccattttggctggtcttttgattgtgggtgtgattggtggatttggaactgttgggtacatatacaaggaccagatcaatgctttcttgaaccagttttctggcattattgaaggttacgggccagctggatatgctctttttgttgcagtttatgctggactagaaatccttgcaatacctgccattccgttgaccatgtcggctggtcttctatttggcactgtcactgggaccatcattgtttccattggtggaacggtggcggcaagtgttgcattcttgattgccagatattttgctcgggaacgtattcttaagttggtcgaagggaacaagaaatttcttgcaatagacaaagcaattggagaaaatggtttcaaagttgtgactcttctccgtttgagccccttgcttccattttctctcgggaattacctttatggtcttacttcagtcgagtttgtaccatatgtactaggaagttggctaggaatgcttcctggatcatgggcgtatgtgagtgcaggtgcatttggccgtgcaattcttcaagaaggatctgaaattggcctaggaggaaaccagctattgacccttggagttggtttattgtttacagcacttgctgcaacttatgtaacacggctcgctaaggacgctgtaaaagatattgagtgagcagaattatttgtgccctaaccaagtagagtttacaagctcttttatcaacatggacaactaaaaagggcagatcggtgcactaaactctcactatgcacaactacctcgtgtaaattggaaaaacgatatacagttaatgaaatcagataggacaagttgagttgtatcatcttatttgtatcatatcattgattcttgatgcgtagaggatgaacagaaaggaatagaaggattaattagcccctatttgtgctttatgtttgtagcacaattatgattttatttgaattgtattaatctaactaatttaaaagctttaactgttgagaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0106K23.1" temp_strand="-" temp_description="C06HBa0106K23.1  AC211043.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0106K23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="12856" stop="7769"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12556" g_stop="11954" g_length="603"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="603" r_length="603" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11953" i_stop="11099" i_length="855">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11098" g_stop="11046" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="604" r_stop="656" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11045" i_stop="10642" i_length="404">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10641" g_stop="10549" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="657" r_stop="749" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10548" i_stop="10476" i_length="73">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10475" g_stop="10252" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="750" r_stop="973" r_length="224" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10251" i_stop="9497" i_length="755">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9496" g_stop="9430" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="974" r_stop="1040" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="9429" i_stop="8683" i_length="747">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.881" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="8682" g_stop="8578" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1041" r_stop="1145" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="8577" i_stop="8432" i_length="146">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="8431" g_stop="8076" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="1146" r_stop="1501" r_length="356" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1502" polyA_stop="1548"/>
      <MATCH_line gen_id="C06HBa0106K23.1" gen_strand="-" ref_id="SGN-U319828" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1501</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0106K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U319828" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12556" e_stop="11954"/>
          <exon e_start="11098" e_stop="11046"/>
          <exon e_start="10641" e_stop="10549"/>
          <exon e_start="10475" e_stop="10252"/>
          <exon e_start="9496" e_stop="9430"/>
          <exon e_start="8682" e_stop="8578"/>
          <exon e_start="8431" e_stop="8076"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAGATTCTACAAAGTTCCGTTCTTTGATGGAACACCCAACACAAATTTCACCATTGATAACAGTCCTCAAAACACTCTGAATTAACTCAGCACAACCTTAGAACAGAAGAGAGAAATCAAAAGAAAAAAAGGAAGTAGCTTTCCAGTTCCCCTTTATTCATCTGAAATGCCCACCATTGATTTAAGCAGAACACCTTCATGTGTCACTCTTTTTCCATCTTTTCAACAAGGACCCAAGATTCAATTTTCCCTTACAAAATCAGCTGTTAATTCGTTTCTGTATAGTTTTAAACCTAAAAGATTTCATTTCTTGAAACCATGTTCTTCCCTAAAGGAAACCAAGAAACAGCAGACCCTTTTGAAAACACCAAACAAATCTCCTCAGAGTTTCAGGAGACTGGTTAACTTGAACCCCAAAAATGATGATGGAGAGAGTGAGAGTGAGAGGGATAGTGGGTCAGGAGATGATGATAATGCTATTAAAGGTACCATTTTGGCTGGTCTTTTGATTGTGGGTGTGATTGGTGGATTTGGAACTGTTGGGTACATATACAAGGACCAGATCAATGCTTTCTTGAACCAGTTTTCTGGCATTATTGAAGGTAATCTTATATGACTTCTTGTATTAGGTTTCTATACTTACTTGTGGACATTAGAATAAGATATGTTTAGATAGTTCCTATTGGTTAATAGTTCAATCAATCAATAAACTGTGCTTCAATCCCCGAATCGATTGGCTTCCACATCAATAGTCATTCCACTGTATTGAGGGTTAACAATTAGGCGCATTACATAAGTATGTCCTTTGTCTTAGCCTTCAGTTGAAATCACACAAGTAGACACTTAATGTACTATAAAGTTGAACAAGTAGATACACATATCCTACATGGCAAATCTCAGAAGTATACACTTAATCTAAATGGGAATTGGGAGCTTCTTTTTGGTGAATGACCATAAATTTCTAATAAGAAAATTTTATGCGAAAATACGAATCTATGTGACTCTTGGGCTCATGGCTCTTTCTCTTTGCTATTTCCATATTATGCTAGAAGGATGCACCAATCATATAGTTGTTGCCTAACCTGACACGGTCTTCTTCTCTTGGATAAAACAAAACTATTTGGCAAATATCTACTCTTACCTCCTTGTGTTTCCCTGTCTCCTCCTCGTGTATCAAAAATAGGTGAAATAGCATTTCCAAACAAGTATTACCGCTTGCCAAGCTCAAGGTTTCTTTATCTTGTAAACCTGTTTGAACTGATTTGGGTTCCATGTGGCTTTTTTGGTGCTAGTTTGCTTCCTAATACAATTATCTCACACAATACAGTTAGGTGGAAATTTCAAACAAAACTGAGAAACTTGTAAGCCAAATGAATAAAGAATGCAATGATTTTCAAGATTTATCATGTGAGTATACTTTTATGGATTCATTTTGATTGAGGCTCCTCACATGGCAGGTTACGGGCCAGCTGGATATGCTCTTTTTGTTGCAGTTTATGCTGGACTAGAAGTAAGAATTACACTTTGTTTGCTTGGTTTAAAATATTTCGAGAAGCTGCAGCAATGTACTTGTTAGGGGTACAATGTTGTCTAATTGGAAAAACTTTTGTGGTCATAAAATATGGTGTATTTTCCGGTGCGGTCCCATCATATTAGGTTGTGCATGTCTAAGTTTTGTACTTCAGAAGATACTCATAGAGGGCTTATATTATGAACTGACAGAAGTAGCAAGAGTTAATATTCTTATTTTGTCAGTAAGTGAAACTAATGTATTTCAGTCAAGTTTCCTGGGCTTTTGCTTGACCCATGTTCTAGTTCTTTATTCATAATAAGATTAAATGTGCCTAGCGCAATAAGTGAAACCTTTAGAGTTTCTATATGGAACTGACTTTCAATATTGCACTTCTGATGTAGATCCTTGCAATACCTGCCATTCCGTTGACCATGTCGGCTGGTCTTCTATTTGGCACTGTCACTGGGACCATCATTGTTTCCATTGGTGGAACGGTAAGCTGATCATTCCATTCAATATAGCCACGATGACGTACAATGTGTTCTCAATAGTGTGATATGAACTCAGGTGGCGGCAAGTGTTGCATTCTTGATTGCCAGATATTTTGCTCGGGAACGTATTCTTAAGTTGGTCGAAGGGAACAAGAAATTTCTTGCAATAGACAAAGCAATTGGAGAAAATGGTTTCAAAGTTGTGACTCTTCTCCGTTTGAGCCCCTTGCTTCCATTTTCTCTCGGGAATTACCTTTATGGTCTTACTTCAGTCGAGTTTGTACCATATGTACTAGGAAGGTGAGTCTCATTTTCTATTTTCACTTCCTTCTTCACCTTTAGGCTAATGGTCAGATGTCTAAATTTCTGTGTTTTGGGTTCACTTCGAGGATGAAGTTCATTTTCGAGGATTTGGAAGAATTCAGATTCTTTTCCCCTGTATTCATGTGAAAATGTATCTTAACATATGCATATAGAAAGAAATACCTCAGTGCTATAATTTTGCATGAATTGTGTAATTTGATATCAGGCCTTTCAGTCACTTAGGCTTTTTTTGTCAGAGAGATGTTTTTGAGGTGGAAATTCCAAGGTAACAGCTATCATATGGTATGTGCTATCTGGTGATGCAAATGAGCTGGCCATTACGTGATCAATTACAAGTGCCAAAAAAGGAAAAACCTAAATTGTGGGGAGAAGAAGAACAGGCTGTCTTTTACATGCCTGTTTTCTTGTTTTATAGTGATATCAAACTCTTTTTTACAGTCTTTGATCACCTTGGGTGATATTTAGCATTAGCAAAGCTGTTTTGTTGAACAATGTAGTAAGGTTTCGTTTGCAATCTAGATTCTAGGTTTGTGGAAGTAGCCTCTCCTTCAGATTTCTTTTTGTTAGATATGAGGGATTGTTTGAGGATAGTGCGATGTCATAGCTATCCAAGAGAGCGAGTATGATAACTTCATGTTGTGCGTCAAATGTACTTTTGCTTTTTGAGGACTTGTTGATTCACTTGTCAGGCATGCTCTTCATATTGATAATATCTTATGTTTTTTACGCAGTTGGCTAGGAATGCTTCCTGGATCATGGGCGTATGTGAGTGCAGGTGCATTTGGCCGTGCAATTCTTGTGAGTTTGCCACTTGTTTATCTTGTGCACTTATCTGTGTGATCTCTATCTCATCTTATAATCAGTCATTTTCTCTGTGATTTTTATTTTTCCTGTCCTGTGGAAATGAGAATTGCAATTTCTGGTTAAGAGAAGCAGGCAGAGTATATAACAGTTGAAATAGCTTCAGAAGTGTACTCTTGCCAATTTATCGTTGTTTTACTCAACCAGAAACATTACAGGCTCTGCTTGGTTCACTCACACTGGCCTAGTGGAGGCAAAAACATTAGATGATTTCTCTCCATTTGTTTTAAGTCTTGGTGGACAAAGTACTTGGTATCTGTGTAGGTAGGTACCCATTAAATTGGTGGAGGTGCGCGCAAACTAGCCCCGGCACCGTGATTATTAAAAAAAAAAAGAAAGACAAAGGACGTTATGTCTTAATCATGACAAGCTAACACAGTTGAGATTAATTACCTACCAACTATTCTGATTTGATCTCACTGGACTATGAAAACAAAAGCGTATTGGGCATGTGAAACCCAAATTGAGACATTCCATTCTCAGTGCTATTGAGTAGCTTTACAACCATTCATAAGTTTCTACTTTGTTCATATTGAGATGTTGTAAGTTGTTGCCTTTCCATCCTTGATGTTAGAACATTAAAAGTTCTGTTAATCTAGGAAGTTTCGAACTCAAATAATAAAGTGATAACTCGCAAGAAATTCAGCAACTCCGTCAATGAACTTATATTTCTTGGTGTTCCAGCAAGAAGGATCTGAAATTGGCCTAGGAGGAAACCAGCTATTGACCCTTGGAGTTGGTTTATTGTTTACAGCACTTGCTGCAACTTATGTAACACGGCTCGCTAAGGTAACACTGATCATTTCCTGTTACAACACTATGCTCATACTGAACCTTGTGTATTTTGATACTTGCATATTCCTTCATCTCTGTAATGAAAGATCTGATCTGTATTTTATGATCGATCGGTTGTAACTTGTTCTTCATCAATGCAGGACGCTGTAAAAGATATTGAGTGAGCAGAATTATTTGTGCCCTAACCAAGTAGAGTTTACAAGCTCTTTTATCAACATGGACAACTAAAAAGGGCAGATCGGTGCACTAAACTCTCACTATGCACAACTACCTCGTGTAAATTGGAAAAACGATATACAGTTAATGAAATCAGATAGGACAAGTTGAGTTGTATCATCTTATTTGTATCATATCATTGATTCTTGATGCGTAGAGGATGAACAGAAAGGAATAGAAGGATTAATTAGCCCCTATTTGTGCTTTATGTTTGTAGCACAATTATGATTTTATTTGAATTGTATTAATCTAACTAATCTAAAAGCTTAAACTGTTGAGA</genome_strand>
        <mrna_strand>GTAGATTCTACAAAGTTCCGTTCTTTGATGGAACACCCAACACAAATTTCACCATTGATAACAGTCCTCAAAACACTCTGAATTAACTCAGCACAACCTTAGAACAGAAGAGAGAAATCAAAAGAAAAAAAGGAAGTAGCTTTCCAGTTCCCCTTTATTCATCTGAAATGCCCACCATTGATTTAAGCAGAACACCTTCATGTGTCACTCTTTTTCCATCTTTTCAACAAGGACCCAAGATTCAATTTTCCCTTACAAAATCAGCTGTTAATTCGTTTCTGTATAGTTTTAAACCTAAAAGATTTCATTTCTTGAAACCATGTTCTTCCCTAAAGGAAACCAAGAAACAGCAGACCCTTTTGAAAACACCAAACAAATCTCCTCAGAGTTTCAGGAGACTGGTTAACTTGAACCCCAAAAATGATGATGGAGAGAGTGAGAGTGAGAGGGATAGTGGGTCAGGAGATGATGATAATGCTATTAAAGGTACCATTTTGGCTGGTCTTTTGATTGTGGGTGTGATTGGTGGATTTGGAACTGTTGGGTACATATACAAGGACCAGATCAATGCTTTCTTGAACCAGTTTTCTGGCATTATTGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACGGGCCAGCTGGATATGCTCTTTTTGTTGCAGTTTATGCTGGACTAGAA....................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTTGCAATACCTGCCATTCCGTTGACCATGTCGGCTGGTCTTCTATTTGGCACTGTCACTGGGACCATCATTGTTTCCATTGGTGGAACG.........................................................................GTGGCGGCAAGTGTTGCATTCTTGATTGCCAGATATTTTGCTCGGGAACGTATTCTTAAGTTGGTCGAAGGGAACAAGAAATTTCTTGCAATAGACAAAGCAATTGGAGAAAATGGTTTCAAAGTTGTGACTCTTCTCCGTTTGAGCCCCTTGCTTCCATTTTCTCTCGGGAATTACCTTTATGGTCTTACTTCAGTCGAGTTTGTACCATATGTACTAGGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCTAGGAATGCTTCCTGGATCATGGGCGTATGTGAGTGCAGGTGCATTTGGCCGTGCAATTCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAGGATCTGAAATTGGCCTAGGAGGAAACCAGCTATTGACCCTTGGAGTTGGTTTATTGTTTACAGCACTTGCTGCAACTTATGTAACACGGCTCGCTAAG..................................................................................................................................................GACGCTGTAAAAGATATTGAGTGAGCAGAATTATTTGTGCCCTAACCAAGTAGAGTTTACAAGCTCTTTTATCAACATGGACAACTAAAAAGGGCAGATCGGTGCACTAAACTCTCACTATGCACAACTACCTCGTGTAAATTGGAAAAACGATATACAGTTAATGAAATCAGATAGGACAAGTTGAGTTGTATCATCTTATTTGTATCATATCATTGATTCTTGATGCGTAGAGGATGAACAGAAAGGAATAGAAGGATTAATTAGCCCCTATTTGTGCTTTATGTTTGTAGCACAATTATGATTTTATTTGAATTGTATTAATCTAACTAATTTAAAAGCTTTAACTGTTGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U317345" ref_strand="+" ref_description="SGN-U317345        Tomato 200607 #1 [10 ESTs aligned] arabidopsis/peptide: | Symbol: None | bifunctional aspartate kinase/homoserine dehydrogenase / AK-HSDH, nearly identical to gb:X71364 (PIR:S46497) aspartate kinase / homoserine dehydrogenase from Arabidopsis thaliana; contains ACT domain | chr1:11158278-11163255 REVERSE | Aliases: F28K20.19, F28K20_19(evalue: 1e-105, score=380) genbank/nr: aspartokinase-homoserine(evalue: 3e-105, score=385)">
      <seq>agactctcatatcgcaagccattactatgactggttgcatagaggaatccatgtggtcaccccaaataaaaaggctaattcaggaccacttgaccgggtaactaagtactttcatgtttgatttcatttcctcttaaaagtgcttaacctcgcaaactttcttgcgctttgatccactatgtcaataatcaagttttcagcccttggtaattatatttttctttacgctgtctttccattatgatagaattgaagaccttgtaaaacttttgtcgttatctctattacaaaaatacctcgagacgaaaccagctagtaaacggcaattataaatagctggaggaggaagcttctcatactttttatttttttaattttccttctattgcctccagtacttgaagctgagagatctacaacgacaatcatatacacactacttctatgaagctactgttggagctggactaccaatcattagcaccttacgtggtcttcttgaaactggggacaagattttgcggattgagggtatttttagtggaactctgagttacatatttaataacttcatggggacaaaagcttttagccaagtggtgaaggaggcgaaagaggctggttatactgagccagatccaagggatgacctatctggaacagacgttgccagaaaggtgataattcttgctagagaaagtggattaaacctagagctttcagatatccctgttcagagccttgtgccagaacctttaagggctactgcatctgccgaggactttttgctggaccttccaaaatttgatcatgagttgtctaaacagaggcaggaggctgaagatgaagaggaggtcttgaggtatgttggagtagtggatgttgtcaacggaaaaggtgctgttgaattgcggagatacaacaaggaccatccattcgcgcaactctctggatcggacaacataattgcattcactactgaaagatattgtaagcaacctctaatagttcgtggtccgggagctggggctgaagtgacagcaggtggaatattcagtgatatattgcgacttgcctcatatcttggtgctccatcataattcatggtgcttccccccagtaatcgtaattctgcatttcgtttggtcatcccccttgcttatagtagcagcagatatatagttacatgattgttgtgtaattgtgagcaactgatagtgttgctcactttgtatcatggcgcttatcatcgtaggttgcttatttaggaataagtctgataggtactaaagctgtatgatggtcatatgatgttgtatgtcaatggaattaattaactgttcaaagcttttttttttttataattattggaattcacctcaaaaaaaaaaaaaaaaaaaaacttcgggggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0106K23.1" temp_strand="-" temp_description="C06HBa0106K23.1  AC211043.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0106K23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="19779" stop="16920"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19479" g_stop="18939" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="541" r_length="541" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18938" i_stop="18743" i_length="196">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18742" g_stop="18607" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="542" r_stop="677" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18606" i_stop="18336" i_length="271">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18335" g_stop="18252" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="678" r_stop="761" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18251" i_stop="18168" i_length="84">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18167" g_stop="18075" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="762" r_stop="854" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18074" i_stop="17752" i_length="323">
            <donor d_prob="0.861" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17751" g_stop="17221" g_length="531"/>
          <reference_exon_boundary r_type="cDNA" r_start="855" r_stop="1383" r_length="529" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1384" polyA_stop="1403"/>
      <MATCH_line gen_id="C06HBa0106K23.1" gen_strand="-" ref_id="SGN-U317345" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1385</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0106K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U317345" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19479" e_stop="18939"/>
          <exon e_start="18742" e_stop="18607"/>
          <exon e_start="18335" e_stop="18252"/>
          <exon e_start="18167" e_stop="18075"/>
          <exon e_start="17751" e_stop="17221"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACTCTCATATCGCAAGCCATTACTATGACTGGTTGCATAGAGGAATCCATGTGGTCACCCCAAATAAAAAGGCTAATTCAGGACCACTTGACCGGGTAACTAAGTACTTTCATGTTTGATTTCATTTCCTCTTAAAAGTGCTTAACCTCGCAAACTTTCTTGCGCTTTGATCCACTATGTCAATAATCAAGTTTTCAGCCCTTGGTAATTATATTTTTCTTTACGCTGTCTTTCCATTATGATAGAATTGAAGACCTTGTAAAACTTTTGTCGTTATCTCTATTACAAAAATACCTCGAGACGAAACCAGCTAGTAAACGGCAATTATAAATAGCTGGAGGAGGAAGCTTCTCATACTTTTTATTTTTTTAATTTTCCTTCTATTGCCTCCAGTACTTGAAGCTGAGAGATCTACAACGACAATCATATACACACTACTTCTATGAAGCTACTGTTGGAGCTGGACTACCAATCATTAGCACCTTACGTGGTCTTCTTGAAACTGGGGACAAGATTTTGCGGATTGAGGGTATTTTTAGGTTGGTATGAATGAGATTATTCATTTTATGGGATTCAGATGAAACTCATCTTATCCTAAATTGTGGATTGTATAATGAAGCTATCCTTGTCTTAGCTACAAGAAGCACCATTTGAGTGCAAAACTTCTCTATTTAATCTGATCCCTTTTTTCATTTCCATGCATTCATTCTTTTCTTTTCTTTTCTTTTTTGGCAGTGGAACTCTGAGTTACATATTTAATAACTTCATGGGGACAAAAGCTTTTAGCCAAGTGGTGAAGGAGGCGAAAGAGGCTGGTTATACTGAGCCAGATCCAAGGGATGACCTATCTGGAACAGACGTTGCCAGAAAGGTATTGGCTGATAGGTTTTGGATGTTTACATTTACTGTTATGAAGTGTCAACCCTACGCAAGATCTCATTCTTTTTCTTTTTGTCCAATGCTTGATGAAATTTCCAACCACAACTTAGTGTTGCAAAAACGATATCTGTCAATTTACTTCTATACTGATCCCACCTCTTGCTGTTCATTTCCCTTCCGCCTTAGAATTAAAGACCAAGTTTTATTTTTGAGTTTACCCATGGCTTGATGATTTTTGATGTGCAAAAACTTTCCTGTTCCAGGTGATAATTCTTGCTAGAGAAAGTGGATTAAACCTAGAGCTTTCAGATATCCCTGTTCAGAGCCTTGTGCCAGAACCTTTAAGGGTGAGTGCTTAGCTTATATCCATGCAACATTAATTGGCAAGGCATATTTATTCTCTATGAAGTGATATTTTCTGTATTTCTCAGGCTACTGCATCTGCCGAGGACTTTTTGCTGGACCTTCCAAAATTTGATCATGAGTTGTCTAAACAGAGGCAGGAGGCTGAAGATGAAGAGGAGGTGAGTACTCTGGACTTGTAGAATTGAGCCTCAGAGTATTCTGATAGTCATGTTGTCTGAACGAACCTGCTATACTCCCTCCGTTGAAGTTACTTTTTTCCATACCTTTTTAGACCGTAGTAATGTCAAACAATCAATTTTCAAGCATCATCTCAGTACCTTGCCAAGTCACATGAAACATTTAATTTCACGTAGTAAGAATATGACTTTATATAGAACAAGAGCCGTTAGAATTCCACTGTGGAAGAGTTCCATTTTGCACGTTCAGTATCTTGCATTGAAGTGTCCCTTGTTTCCATCTGAAAATGTTGATATTCATGAAGGTCTTGAGGTATGTTGGAGTAGTGGATGTTGTCAACGGAAAAGGTGCTGTTGAATTGCGGAGATACAACAAGGACCATCCATTCGCGCAACTCTCTGGATCGGACAACATAATTGCATTCACTACTGAAAGATATTGTAAGCAACCTCTAATAGTTCGTGGTCCGGGAGCTGGGGCTGAAGTGACAGCAGGTGGAATATTCAGTGATATATTGCGACTTGCCTCATATCTTGGTGCTCCATCATAATTCATGGTGCTTCCCCCCAGTAATCGTAATTCTGCATTTCGTTTGGTCATCCCCCTTGCTTATAGTAGCAGCAGATATATAGTTACATGATTGTTGTGTAATTGTGAGCAACTGATAGTGTTGCTCACTTTGTATCATGGCGCTTATCATCGTAGGTTGCTTATTTAGGAATAAGTCTGATAGGTACTAAAGCTGTATGATGGTCATATGATGTTGTATGTCAATGGAATTAATTAACTGTTCAAAGCTTTCTTTTTGCTTTATAATTATTGGAATTCACCTCAG</genome_strand>
        <mrna_strand>AGACTCTCATATCGCAAGCCATTACTATGACTGGTTGCATAGAGGAATCCATGTGGTCACCCCAAATAAAAAGGCTAATTCAGGACCACTTGACCGGGTAACTAAGTACTTTCATGTTTGATTTCATTTCCTCTTAAAAGTGCTTAACCTCGCAAACTTTCTTGCGCTTTGATCCACTATGTCAATAATCAAGTTTTCAGCCCTTGGTAATTATATTTTTCTTTACGCTGTCTTTCCATTATGATAGAATTGAAGACCTTGTAAAACTTTTGTCGTTATCTCTATTACAAAAATACCTCGAGACGAAACCAGCTAGTAAACGGCAATTATAAATAGCTGGAGGAGGAAGCTTCTCATACTTTTTATTTTTTTAATTTTCCTTCTATTGCCTCCAGTACTTGAAGCTGAGAGATCTACAACGACAATCATATACACACTACTTCTATGAAGCTACTGTTGGAGCTGGACTACCAATCATTAGCACCTTACGTGGTCTTCTTGAAACTGGGGACAAGATTTTGCGGATTGAGGGTATTTTTAG....................................................................................................................................................................................................TGGAACTCTGAGTTACATATTTAATAACTTCATGGGGACAAAAGCTTTTAGCCAAGTGGTGAAGGAGGCGAAAGAGGCTGGTTATACTGAGCCAGATCCAAGGGATGACCTATCTGGAACAGACGTTGCCAGAAAG...............................................................................................................................................................................................................................................................................GTGATAATTCTTGCTAGAGAAAGTGGATTAAACCTAGAGCTTTCAGATATCCCTGTTCAGAGCCTTGTGCCAGAACCTTTAAGG....................................................................................GCTACTGCATCTGCCGAGGACTTTTTGCTGGACCTTCCAAAATTTGATCATGAGTTGTCTAAACAGAGGCAGGAGGCTGAAGATGAAGAGGAG...................................................................................................................................................................................................................................................................................................................................GTCTTGAGGTATGTTGGAGTAGTGGATGTTGTCAACGGAAAAGGTGCTGTTGAATTGCGGAGATACAACAAGGACCATCCATTCGCGCAACTCTCTGGATCGGACAACATAATTGCATTCACTACTGAAAGATATTGTAAGCAACCTCTAATAGTTCGTGGTCCGGGAGCTGGGGCTGAAGTGACAGCAGGTGGAATATTCAGTGATATATTGCGACTTGCCTCATATCTTGGTGCTCCATCATAATTCATGGTGCTTCCCCCCAGTAATCGTAATTCTGCATTTCGTTTGGTCATCCCCCTTGCTTATAGTAGCAGCAGATATATAGTTACATGATTGTTGTGTAATTGTGAGCAACTGATAGTGTTGCTCACTTTGTATCATGGCGCTTATCATCGTAGGTTGCTTATTTAGGAATAAGTCTGATAGGTACTAAAGCTGTATGATGGTCATATGATGTTGTATGTCAATGGAATTAATTAACTGTTCAAAGCTTT-TTTTT-TTTTATAATTATTGGAATTCACCTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U317346" ref_strand="+" ref_description="SGN-U317346        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | bifunctional aspartate kinase/homoserine dehydrogenase / AK-HSDH, nearly identical to gb:X71364 (PIR:S46497) aspartate kinase / homoserine dehydrogenase from Arabidopsis thaliana; contains ACT domain | chr1:11158278-11163255 REVERSE | Aliases: F28K20.19, F28K20_19(evalue: 1e-71, score=266) genbank/nr: putative(evalue: 1e-70, score=269)">
      <seq>catcccaaatagtgttatagtggattgcactgcagactctcatatcgcaagccattactatgactggttgcatagaggaatccatgtggtcaccccaaataaaaaggctaattcaggaccacttgaccggtacttgaagctgagagatctacaacgacaatcatatacacactacttctatgaagctactgttggagctggactaccaatcattagcaccttacgtggtcttcttgaaactggggacaagattttgcggattgagggtatttttagtggaactctgagttacatatttaataacttcatggggacaaaagcttttagccaagtggtgaaggaggcgaaagaggctggttatactgagccagatccaagggatgacctatctggaacagacgttgccagaaaggtgataattcttgctagagaaagtggatgttgtcaacggaaaaggtgctgttgaattgcggagatacaacaaggaccatccattcgcgcaactctctggatcggacaacataattgcattcactactgaaagatattgtaagcaacctctaatagttcgtggtccgggagctggggctgaagtgacagcaggtggaatattcagtgatatattgcgacttgcctcatatcttggtgctccatcataattcatggtgcttccccccagtaatcgtaattctgcatttcgtttggtcatcccccttgcttatagtagcagcagatatatagttacatgattgttgtgtaattgtgagcaactgatagtgttgctcactttgtatcatggcgcttatcatcgtaggttgcttatttaggaataagtctgataggtactaaagctgtatgatggtcatatgatgttgtatgtcaatggaattaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0106K23.1" temp_strand="-" temp_description="C06HBa0106K23.1  AC211043.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0106K23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="19812" stop="16972"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19512" g_stop="19383" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="130" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19382" i_stop="19085" i_length="298">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.665" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19084" g_stop="18939" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="276" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18938" i_stop="18743" i_length="196">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18742" g_stop="18607" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="412" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18606" i_stop="18336" i_length="271">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18335" g_stop="18313" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="435" r_length="23" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18312" i_stop="17730" i_length="583">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.450" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17729" g_stop="17272" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="436" r_stop="893" r_length="458" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0106K23.1" gen_strand="-" ref_id="SGN-U317346" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>893</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0106K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U317346" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19512" e_stop="19383"/>
          <exon e_start="19084" e_stop="18939"/>
          <exon e_start="18742" e_stop="18607"/>
          <exon e_start="18335" e_stop="18313"/>
          <exon e_start="17729" e_stop="17272"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCCCAAATAGTGTTATAGTGGATTGCACTGCAGACTCTCATATCGCAAGCCATTACTATGACTGGTTGCATAGAGGAATCCATGTGGTCACCCCAAATAAAAAGGCTAATTCAGGACCACTTGACCGGGTAACTAAGTACTTTCATGTTTGATTTCATTTCCTCTTAAAAGTGCTTAACCTCGCAAACTTTCTTGCGCTTTGATCCACTATGTCAATAATCAAGTTTTCAGCCCTTGGTAATTATATTTTTCTTTACGCTGTCTTTCCATTATGATAGAATTGAAGACCTTGTAAAACTTTTGTCGTTATCTCTATTACAAAAATACCTCGAGACGAAACCAGCTAGTAAACGGCAATTATAAATAGCTGGAGGAGGAAGCTTCTCATACTTTTTATTTTTTTAATTTTCCTTCTATTGCCTCCAGTACTTGAAGCTGAGAGATCTACAACGACAATCATATACACACTACTTCTATGAAGCTACTGTTGGAGCTGGACTACCAATCATTAGCACCTTACGTGGTCTTCTTGAAACTGGGGACAAGATTTTGCGGATTGAGGGTATTTTTAGGTTGGTATGAATGAGATTATTCATTTTATGGGATTCAGATGAAACTCATCTTATCCTAAATTGTGGATTGTATAATGAAGCTATCCTTGTCTTAGCTACAAGAAGCACCATTTGAGTGCAAAACTTCTCTATTTAATCTGATCCCTTTTTTCATTTCCATGCATTCATTCTTTTCTTTTCTTTTCTTTTTTGGCAGTGGAACTCTGAGTTACATATTTAATAACTTCATGGGGACAAAAGCTTTTAGCCAAGTGGTGAAGGAGGCGAAAGAGGCTGGTTATACTGAGCCAGATCCAAGGGATGACCTATCTGGAACAGACGTTGCCAGAAAGGTATTGGCTGATAGGTTTTGGATGTTTACATTTACTGTTATGAAGTGTCAACCCTACGCAAGATCTCATTCTTTTTCTTTTTGTCCAATGCTTGATGAAATTTCCAACCACAACTTAGTGTTGCAAAAACGATATCTGTCAATTTACTTCTATACTGATCCCACCTCTTGCTGTTCATTTCCCTTCCGCCTTAGAATTAAAGACCAAGTTTTATTTTTGAGTTTACCCATGGCTTGATGATTTTTGATGTGCAAAAACTTTCCTGTTCCAGGTGATAATTCTTGCTAGAGAAAGTGGATTAAACCTAGAGCTTTCAGATATCCCTGTTCAGAGCCTTGTGCCAGAACCTTTAAGGGTGAGTGCTTAGCTTATATCCATGCAACATTAATTGGCAAGGCATATTTATTCTCTATGAAGTGATATTTTCTGTATTTCTCAGGCTACTGCATCTGCCGAGGACTTTTTGCTGGACCTTCCAAAATTTGATCATGAGTTGTCTAAACAGAGGCAGGAGGCTGAAGATGAAGAGGAGGTGAGTACTCTGGACTTGTAGAATTGAGCCTCAGAGTATTCTGATAGTCATGTTGTCTGAACGAACCTGCTATACTCCCTCCGTTGAAGTTACTTTTTTCCATACCTTTTTAGACCGTAGTAATGTCAAACAATCAATTTTCAAGCATCATCTCAGTACCTTGCCAAGTCACATGAAACATTTAATTTCACGTAGTAAGAATATGACTTTATATAGAACAAGAGCCGTTAGAATTCCACTGTGGAAGAGTTCCATTTTGCACGTTCAGTATCTTGCATTGAAGTGTCCCTTGTTTCCATCTGAAAATGTTGATATTCATGAAGGTCTTGAGGTATGTTGGAGTAGTGGATGTTGTCAACGGAAAAGGTGCTGTTGAATTGCGGAGATACAACAAGGACCATCCATTCGCGCAACTCTCTGGATCGGACAACATAATTGCATTCACTACTGAAAGATATTGTAAGCAACCTCTAATAGTTCGTGGTCCGGGAGCTGGGGCTGAAGTGACAGCAGGTGGAATATTCAGTGATATATTGCGACTTGCCTCATATCTTGGTGCTCCATCATAATTCATGGTGCTTCCCCCCAGTAATCGTAATTCTGCATTTCGTTTGGTCATCCCCCTTGCTTATAGTAGCAGCAGATATATAGTTACATGATTGTTGTGTAATTGTGAGCAACTGATAGTGTTGCTCACTTTGTATCATGGCGCTTATCATCGTAGGTTGCTTATTTAGGAATAAGTCTGATAGGTACTAAAGCTGTATGATGGTCATATGATGTTGTATGTCAATGGAATTAAT</genome_strand>
        <mrna_strand>CATCCCAAATAGTGTTATAGTGGATTGCACTGCAGACTCTCATATCGCAAGCCATTACTATGACTGGTTGCATAGAGGAATCCATGTGGTCACCCCAAATAAAAAGGCTAATTCAGGACCACTTGACCGG..........................................................................................................................................................................................................................................................................................................TACTTGAAGCTGAGAGATCTACAACGACAATCATATACACACTACTTCTATGAAGCTACTGTTGGAGCTGGACTACCAATCATTAGCACCTTACGTGGTCTTCTTGAAACTGGGGACAAGATTTTGCGGATTGAGGGTATTTTTAG....................................................................................................................................................................................................TGGAACTCTGAGTTACATATTTAATAACTTCATGGGGACAAAAGCTTTTAGCCAAGTGGTGAAGGAGGCGAAAGAGGCTGGTTATACTGAGCCAGATCCAAGGGATGACCTATCTGGAACAGACGTTGCCAGAAAG...............................................................................................................................................................................................................................................................................GTGATAATTCTTGCTAGAGAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATGTTGTCAACGGAAAAGGTGCTGTTGAATTGCGGAGATACAACAAGGACCATCCATTCGCGCAACTCTCTGGATCGGACAACATAATTGCATTCACTACTGAAAGATATTGTAAGCAACCTCTAATAGTTCGTGGTCCGGGAGCTGGGGCTGAAGTGACAGCAGGTGGAATATTCAGTGATATATTGCGACTTGCCTCATATCTTGGTGCTCCATCATAATTCATGGTGCTTCCCCCCAGTAATCGTAATTCTGCATTTCGTTTGGTCATCCCCCTTGCTTATAGTAGCAGCAGATATATAGTTACATGATTGTTGTGTAATTGTGAGCAACTGATAGTGTTGCTCACTTTGTATCATGGCGCTTATCATCGTAGGTTGCTTATTTAGGAATAAGTCTGATAGGTACTAAAGCTGTATGATGGTCATATGATGTTGTATGTCAATGGAATTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U336057" ref_strand="+" ref_description="SGN-U336057        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | bifunctional aspartate kinase/homoserine dehydrogenase / AK-HSDH, nearly identical to gb:X71364 (PIR:S46497) aspartate kinase / homoserine dehydrogenase from Arabidopsis thaliana; contains ACT domain | chr1:11158278-11163255 REVERSE | Aliases: F28K20.19, F28K20_19(evalue: 9e-113, score=300) genbank/nr: aspartokinase-homoserine(evalue: 1e-111, score=302)">
      <seq>gttatagtggattgcactgcagactctcatatcgcaagccattactatgactggttgcatataggaatccatgtggtcgccccaaataaaaaggctaattcacgaccacttgaccggaacttgaagctgagagatctacaacgacaatcatatacacactacttctatgaagctactgttggagctggactaccaatcattagcaccttacgtggccttcgttgaaactggggacaaaattttgcggattgagggtatttttagtggaactctgagttacatatttaataacttcatggggacaaaagcttttacccaagtggagaaggaggcgaaagaggctggttatactgagccagatccaagggatgacctatctggaacagacgttgccagaaaggtgataattcttgctagagaaagtggattaaacctagagctttcatatatccctgttcagagccttgtgccataacctttaaaggctactgcatctgccgaggactttttgctggaccttccaaaatttgatcatgatttgtctaaacagaggcaggaggctgaagatgaagaggaggtcttgaggtatgttggagtagtggatgttgtcaacggaaaaggtgctgttgaattgcggagatacaacaaggaccatccattcacgcaactctctggatcggacaacataattgcattcactactgaaagatattgaaagcaacctctaatagatcgtggtccggtagctggggctgaactgacaccaggaggaatattcagtgatatattgcgacttgcctcatatcttggagctccatcataattca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0106K23.1" temp_strand="-" temp_description="C06HBa0106K23.1  AC211043.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0106K23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="19799" stop="17202"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19499" g_stop="19383" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="117" r_length="117" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19382" i_stop="19085" i_length="298">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.665" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19084" g_stop="18939" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="264" r_length="147" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18938" i_stop="18743" i_length="196">
            <donor d_prob="0.909" d_score="0.92"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18742" g_stop="18607" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="400" r_length="136" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18606" i_stop="18336" i_length="271">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18335" g_stop="18252" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="484" r_length="84" r_score="0.964"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18251" i_stop="18168" i_length="84">
            <donor d_prob="0.989" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18167" g_stop="18075" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="577" r_length="93" r_score="0.989"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="18074" i_stop="17752" i_length="323">
            <donor d_prob="0.861" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17751" g_stop="17502" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="578" r_stop="827" r_length="250" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0106K23.1" gen_strand="-" ref_id="SGN-U336057" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>826</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0106K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U336057" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19499" e_stop="19383"/>
          <exon e_start="19084" e_stop="18939"/>
          <exon e_start="18742" e_stop="18607"/>
          <exon e_start="18335" e_stop="18252"/>
          <exon e_start="18167" e_stop="18075"/>
          <exon e_start="17751" e_stop="17502"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTATAGTGGATTGCACTGCAGACTCTCATATCGCAAGCCATTACTATGACTGGTTGCATAGAGGAATCCATGTGGTCACCCCAAATAAAAAGGCTAATTCAGGACCACTTGACCGGGTAACTAAGTACTTTCATGTTTGATTTCATTTCCTCTTAAAAGTGCTTAACCTCGCAAACTTTCTTGCGCTTTGATCCACTATGTCAATAATCAAGTTTTCAGCCCTTGGTAATTATATTTTTCTTTACGCTGTCTTTCCATTATGATAGAATTGAAGACCTTGTAAAACTTTTGTCGTTATCTCTATTACAAAAATACCTCGAGACGAAACCAGCTAGTAAACGGCAATTATAAATAGCTGGAGGAGGAAGCTTCTCATACTTTTTATTTTTTTAATTTTCCTTCTATTGCCTCCAGTACTTGAAGCTGAGAGATCTACAACGACAATCATATACACACTACTTCTATGAAGCTACTGTTGGAGCTGGACTACCAATCATTAGCACCTTACGTGGTCTTC-TTGAAACTGGGGACAAGATTTTGCGGATTGAGGGTATTTTTAGGTTGGTATGAATGAGATTATTCATTTTATGGGATTCAGATGAAACTCATCTTATCCTAAATTGTGGATTGTATAATGAAGCTATCCTTGTCTTAGCTACAAGAAGCACCATTTGAGTGCAAAACTTCTCTATTTAATCTGATCCCTTTTTTCATTTCCATGCATTCATTCTTTTCTTTTCTTTTCTTTTTTGGCAGTGGAACTCTGAGTTACATATTTAATAACTTCATGGGGACAAAAGCTTTTAGCCAAGTGGTGAAGGAGGCGAAAGAGGCTGGTTATACTGAGCCAGATCCAAGGGATGACCTATCTGGAACAGACGTTGCCAGAAAGGTATTGGCTGATAGGTTTTGGATGTTTACATTTACTGTTATGAAGTGTCAACCCTACGCAAGATCTCATTCTTTTTCTTTTTGTCCAATGCTTGATGAAATTTCCAACCACAACTTAGTGTTGCAAAAACGATATCTGTCAATTTACTTCTATACTGATCCCACCTCTTGCTGTTCATTTCCCTTCCGCCTTAGAATTAAAGACCAAGTTTTATTTTTGAGTTTACCCATGGCTTGATGATTTTTGATGTGCAAAAACTTTCCTGTTCCAGGTGATAATTCTTGCTAGAGAAAGTGGATTAAACCTAGAGCTTTCAGATATCCCTGTTCAGAGCCTTGTGCCAGAACCTTTAAGGGTGAGTGCTTAGCTTATATCCATGCAACATTAATTGGCAAGGCATATTTATTCTCTATGAAGTGATATTTTCTGTATTTCTCAGGCTACTGCATCTGCCGAGGACTTTTTGCTGGACCTTCCAAAATTTGATCATGAGTTGTCTAAACAGAGGCAGGAGGCTGAAGATGAAGAGGAGGTGAGTACTCTGGACTTGTAGAATTGAGCCTCAGAGTATTCTGATAGTCATGTTGTCTGAACGAACCTGCTATACTCCCTCCGTTGAAGTTACTTTTTTCCATACCTTTTTAGACCGTAGTAATGTCAAACAATCAATTTTCAAGCATCATCTCAGTACCTTGCCAAGTCACATGAAACATTTAATTTCACGTAGTAAGAATATGACTTTATATAGAACAAGAGCCGTTAGAATTCCACTGTGGAAGAGTTCCATTTTGCACGTTCAGTATCTTGCATTGAAGTGTCCCTTGTTTCCATCTGAAAATGTTGATATTCATGAAGGTCTTGAGGTATGTTGGAGTAGTGGATGTTGTCAACGGAAAAGGTGCTGTTGAATTGCGGAGATACAACAAGGACCATCCATTCGCGCAACTCTCTGGATCGGACAACATAATTGCATTCACTACTGAAAGATATTGTAAGCAACCTCTAATAGTTCGTGGTCCGGGAGCTGGGGCTGAAGTGACAGCAGGTGGAATATTCAGTGATATATTGCGACTTGCCTCATATCTTGGTGCTCCATCATAATTCA</genome_strand>
        <mrna_strand>GTTATAGTGGATTGCACTGCAGACTCTCATATCGCAAGCCATTACTATGACTGGTTGCATATAGGAATCCATGTGGTCGCCCCAAATAAAAAGGCTAATTCACGACCACTTGACCGG..........................................................................................................................................................................................................................................................................................................AACTTGAAGCTGAGAGATCTACAACGACAATCATATACACACTACTTCTATGAAGCTACTGTTGGAGCTGGACTACCAATCATTAGCACCTTACGTGGCCTTCGTTGAAACTGGGGACAAAATTTTGCGGATTGAGGGTATTTTTAG....................................................................................................................................................................................................TGGAACTCTGAGTTACATATTTAATAACTTCATGGGGACAAAAGCTTTTACCCAAGTGGAGAAGGAGGCGAAAGAGGCTGGTTATACTGAGCCAGATCCAAGGGATGACCTATCTGGAACAGACGTTGCCAGAAAG...............................................................................................................................................................................................................................................................................GTGATAATTCTTGCTAGAGAAAGTGGATTAAACCTAGAGCTTTCATATATCCCTGTTCAGAGCCTTGTGCCATAACCTTTAAAG....................................................................................GCTACTGCATCTGCCGAGGACTTTTTGCTGGACCTTCCAAAATTTGATCATGATTTGTCTAAACAGAGGCAGGAGGCTGAAGATGAAGAGGAG...................................................................................................................................................................................................................................................................................................................................GTCTTGAGGTATGTTGGAGTAGTGGATGTTGTCAACGGAAAAGGTGCTGTTGAATTGCGGAGATACAACAAGGACCATCCATTCACGCAACTCTCTGGATCGGACAACATAATTGCATTCACTACTGAAAGATATTGAAAGCAACCTCTAATAGATCGTGGTCCGGTAGCTGGGGCTGAACTGACACCAGGAGGAATATTCAGTGATATATTGCGACTTGCCTCATATCTTGGAGCTCCATCATAATTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U330804" ref_strand="+" ref_description="SGN-U330804        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | bifunctional aspartate kinase/homoserine dehydrogenase / AK-HSDH, nearly identical to gb:X71364 (PIR:S46497) aspartate kinase / homoserine dehydrogenase from Arabidopsis thaliana; contains ACT domain | chr1:11158278-11163255 REVERSE | Aliases: F28K20.19, F28K20_19(evalue: 6e-89, score=321) genbank/nr: gi|6692137|gb|AAF24602.1| T19E23.1 [Arabidopsis thaliana](evalue: 4e-87, score=321)">
      <seq>taatactggagagactatcttatcaagaggcatgggaaatgtcatattttggtgccaatgtcttgcatccacggacaattgttccagttatgcaatatgacattcctatcattataaaaaacatctttaaccttgctgcacctggaacaaggatctgccgatctactgataatgaatttgtagatggacagatatcagaatcccctgtcaaaggatttgcaacgattgacaaactagctctagtgaatgttgagggaaccggaatgactggtgttcctggtacagctagtgacatttttggtgtagtaaaaagtgttggtgctaacgtaatcatgatatcgcaggctagtagtgagcattcaatctgctttgcggtgcctgaaaaagaagtgaaagctgttgctgatgctttagagtctaggtttggtcaggctctgagttccgggcgcctttctcagatttcagtgattccaggctgtagtattttggctgctgttggtcagagaatggcaagctcttctggagttagtgctacatttttcagtgcacttgcaaaggcaaatattaatattcgtgctatagctcaaggttgctcaaagtacaatgtaaccagaaattgttaaacaagaaaactgtgtgatgtcttttacgtgctgtgcactcaagattctatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0106K23.1" temp_strand="-" temp_description="C06HBa0106K23.1  AC211043.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0106K23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="24585" stop="21000"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24285" g_stop="24245" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24244" i_stop="24160" i_length="85">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24159" g_stop="23945" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="256" r_length="215" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23944" i_stop="23823" i_length="122">
            <donor d_prob="0.169" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23822" g_stop="23735" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="344" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="23734" i_stop="23658" i_length="77">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="23657" g_stop="23544" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="458" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="23543" i_stop="22246" i_length="1298">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.420" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="22245" g_stop="22147" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="557" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="22146" i_stop="21417" i_length="730">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="21416" g_stop="21300" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="558" r_stop="676" r_length="119" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0106K23.1" gen_strand="-" ref_id="SGN-U330804" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>674</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0106K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U330804" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24285" e_stop="24245"/>
          <exon e_start="24159" e_stop="23945"/>
          <exon e_start="23822" e_stop="23735"/>
          <exon e_start="23657" e_stop="23544"/>
          <exon e_start="22245" e_stop="22147"/>
          <exon e_start="21416" e_stop="21300"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATACTGGAGAGACTATCTTATCAAGAGGCATGGGAAATGGTGATGTCGTGATTCTGTGTGGTTTCTGAAGTTAATAAGAGCTGTCAAGGCATTTTCTAATATAAAATTTCTCACCTTTTTGCAGTCATATTTTGGTGCCAATGTCTTGCATCCACGGACAATTGTTCCAGTTATGCAATATGACATTCCTATCATTATAAAAAACATCTTTAACCTTGCTGCACCTGGAACAAGGATCTGCCGATCTACTGATAATGAATTTGTAGATGGACAGATATCAGAATCCCCTGTCAAAGGATTTGCAACGATTGACAAACTAGCTCTAGTGAATGTTGAGGGGTAGGACCAATAGTTTACTTGCAAAAAAGAATTGATGGGTGTTAGGACTGCACTGCATCCAGTCATACTGTACATCTATTCACAAATTTCTTTGCTTACGCAAAATCGGTTACTTTCTGCAGAACCGGAATGACTGGTGTTCCTGGTACAGCTAGTGACATTTTTGGTGTAGTAAAAAGTGTTGGTGCTAACGTAATCATGATATCGCAGGCATGTTTATTCTTTGATTTCGGGTTAAGCTTATGATGCTTATAACTTCATGAAATTAATTGAGTGCTATAATACAGGCTAGTAGTGAGCATTCAATCTGCTTTGCGGTGCCTGAAAAAGAAGTGAAAGCTGTTGCTGATGCTTTAGAGTCTAGGTTTGGTCAGGCTCTGAGTTCCGGGCGCCTTTCTCAGGTATTCTGCCTTTTTCAATTCAATGTCTGAAGTTAAACACAGTTGTGGATCAGCATAAGAAATAAGCGAAAAAGCAGGAATAATTCTCCACTATGCCTGTTATCTTATAAATTATCTCTTTAAGGCGTTGTATAAGTCCAGAATGACAAAGAGAAGAATCCGTAATGATTACGTTGTCACAAATCTTGAACACTTTTGTTGGAGGAGAAAACCTCATTGCTTAAGGGCATATAGTGACGATGGTTTGCAAAATGTAACTCAGAGTCATAGGGATCATGAATTCCACAATAAAGTTATTATGGTGCTAATTATATCAGAAAGAGGAGAAAAATGTTTAGTGTGGGTTGAGCATTGCATTTATGTCCACCCATAATGTGGAACAACTGTGGGAGTTGTTCCTCTCATTGCAAAAAAAATTAGGTTGACTAGCAGATCTGAAAAGACTGCTTCTGGGGTTGTAGGTTCTCGTTTTTCCAACTTAAAACTTGAGAAGCCCAATCAAGCAAGCTTAACTGCTTAAGAATTAGTAAAGTAAAGCCATAAAAGCTAGTGGTCTCTAGATGCACAAAAGATGGGAAGGAGAACTGGATCAACAGCTTTCAGGGTGCTGATGAGCAGTGCTGTAATCATTTACTCTGCTTGATGCTAATTTCTTTTCGAAAGTTATGGGTAACGAATTCATGATGATCAGGCAATTGAAATCATGAAGCAGATTGAAAATTAGAATAGCCAAAGACAGAAGAAGTGAGGAAAAGTCTGGTAATCACTTTCAGCTTCTGTAGACGTCTCAGAAATGAACACGTACTGCAACTGCTACATTTTGTATGTGGTAATTCTAATTGGCTAAAAATATCACCTCAACATGTCAACACTCGGTAGGTATTTCTGTCTTAAAATATTATACAAAGTAAAGCTAACCTGAGAGGAAACAATCTTGCACATGAAACTTCTTCACACAACCTTCCTCTGTTAAAATAAGAGCTTAGATAAAAAAATAAATCAGCACACTTTCCAGAAATTCATTAGATTTGAAAATTCTTATCATGTTATGAGATAATGTAGAGTTTTTATGAAATTTTGAACTTGGTTTTTGAAGCAGAGTCATGTGCTTCTTTCTGTATTCTTAACAAAAGTTAGTTGTGGGATTTCGGGTACAGTTCATCTGAATTTCAATAACATATGAAGTTTATTGCTTTCTGCTTTTATTTTTTTGTCACTAACTTGGTGTGCAACATTATTTTCATCTACCTGATTAAAAACTTCTTTAATCAACCTGTTAAACTTCAAGTCTTCTCCAGATTTCAGTGATTCCAGGCTGTAGTATTTTGGCTGCTGTTGGTCAGAGAATGGCAAGCTCTTCTGGAGTTAGTGCTACATTTTTCAGTGCACTTGCAAAGGTTTGGTATATCTGATCCTTTTAAATAATAATTGAGAACATTTATGTGAATGTATATAGGTGTGTCTTGTCTAGAGTTACTGGTATTCTTGTAATCCGGTTAAATTAAAAATCTGCTTGTATTTGACCATTTTGTGGATATATCTTGTGTAAATATAATATTCTCCTGATTTTCGTCTATAGTTTATCCATTTCAAGAAAAAAAATAAAAATCATCTATAGTTTATTTTGCTACTGTTATGAGCCCTTAGCCCCTTACATGCATTCCATATCAATTCTCTAACTACCATATCGATCAATCAACTACTACTCAATCCCAAAAGAGCTGAGATCCGCTATACTAATCCCATTTTATCCATTCTACTGTATACGGGCCATTATATTTGTAAACTTCATCTTTGATTCATGATATCATGACTACTTTAACACGTGTGTCAACCTACTGCAAGTCTCCTCCTTTAGGCCGACTTGGTACCGGCTATGTGAAGCTCACTTAATTATAATCTATCTACCATACTGTTCTTGGTATTACGTAAAATGATCTACAGTTTATATGAGCTTTGAACTTTGCTTTAATTGCTGTCTGCTTTTGGCAACTTTGTGTTGCTTTTCCATAAAAATGATACCATGACATTCAAGCAAGAGTTATATAAGATGATCACCGTTACTAGTTGAATTTCATATAATCTATAATGTTTATCATCTTATCTAAGTCACATCTAATTTTGCAGGCAAATATTAATATTCGTGCTATAGCTCAAGGTTGCTCAGAGTACAATGTAA-CAGTAGTTGTTAAGCAAGAAGACTGTGTGAGGGC-TTTACGTGCTGTGCACTCAAGATTCTATTTG</genome_strand>
        <mrna_strand>TAATACTGGAGAGACTATCTTATCAAGAGGCATGGGAAATG.....................................................................................TCATATTTTGGTGCCAATGTCTTGCATCCACGGACAATTGTTCCAGTTATGCAATATGACATTCCTATCATTATAAAAAACATCTTTAACCTTGCTGCACCTGGAACAAGGATCTGCCGATCTACTGATAATGAATTTGTAGATGGACAGATATCAGAATCCCCTGTCAAAGGATTTGCAACGATTGACAAACTAGCTCTAGTGAATGTTGAGGG..........................................................................................................................AACCGGAATGACTGGTGTTCCTGGTACAGCTAGTGACATTTTTGGTGTAGTAAAAAGTGTTGGTGCTAACGTAATCATGATATCGCAG.............................................................................GCTAGTAGTGAGCATTCAATCTGCTTTGCGGTGCCTGAAAAAGAAGTGAAAGCTGTTGCTGATGCTTTAGAGTCTAGGTTTGGTCAGGCTCTGAGTTCCGGGCGCCTTTCTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAGTGATTCCAGGCTGTAGTATTTTGGCTGCTGTTGGTCAGAGAATGGCAAGCTCTTCTGGAGTTAGTGCTACATTTTTCAGTGCACTTGCAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATATTAATATTCGTGCTATAGCTCAAGGTTGCTCAAAGTACAATGTAACCAGAAATTGTTAAACAAGAAAACTGTGTGATGTCTTTTACGTGCTGTGCACTCAAGATTCTATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U322354" ref_strand="+" ref_description="SGN-U322354        Tomato 200607 #1 [8 ESTs aligned] arabidopsis/peptide: AT4G10020.1 | Symbol: None | short-chain dehydrogenase/reductase (SDR) family protein, similar to sterol-binding dehydrogenase steroleosin GI:15824408 from (Sesamum indicum) | chr4:6268313-6270332 FORWARD | Aliases: T5L19.150, T5L19_150 (evalue: 9e-145, score=510) genbank/nr: gi|21311775|gb|AAM46847.1| steroleosin-B [Sesamum indicum](evalue: 3e-153, score=545)">
      <seq>caccattctgctctgttttttttcttcatcttgttgttaaaaaatgatggatttggtgaattcagtgcttaattttgtggtgccaccagcaagtttggttatgttggctttttcatggcctgctttgtatttcatcaacacttgtgagaggatgtacaactcgttctttggtgaagacatggaggacaaaatcgtcatcatcactggagcttcttctggtattggagagcaaattgcatatgaatatgcaaagaagaaagctcatctggttctggttgcacgaagagaaaccagactctggggaattagcgagaatgcgagggcattaggtgcaaaaagtgttgttataacagctgcagatgttgtcaaggaagctgattgtaggagattcattactgagaccgtaaacttatacgggcgtgtggatcatcttgtaaatacagcaagtttgggtcataccttctacctagaagaagccacagatacaaatgtcttccccattttgatggatatcaatttttggggaaatgtgtatcctacctatgttgcactaccttatctgcgacaaagcagaggccgagtcatagtcaatgcttcagtagagagttggttgcccttgccaaggatgagcttatatgcagcagcgaaagcagcacttgtaaatttttatgagaccttgagattcgaggtggacggtgacgtaggggtcacaatagcgacacacggatggattgggactgaaatgacaggtggaagattcatgctagaggaaggtgctgagatgcagtggaaggaagaaagagaagttcatgcatctggaagttcagtggaggactttgcaaagttgattgtatcaggggcatgccgaggagatccatacgtgaaatatccgagttggtacgacattttccttctctatagagtattcacaccaaatgttctccaatggacgtttcggctgttactttcaaaccaaagtgtccggaaaacttccctcattggcaccggaaggcctcttcttgagtcatcctctcctcctcggatgcagcctattcctgagacatcctctcctccacgacagccttcctctgagtcgtcatctcctcgaagacagcctctttctggttcatcctctcctcagcatccatccgcttctcctcggagacgtatggggcctgttcctgttcagcaggattgaaggaagtaagtgaagtaatcactttaatttaacgtggttgtgttttttctttagtcaagattttgtggatatcattgtaagagttcacaagatacaacaaacattcggctcaataaaaagttgtacttggcttgtttaagaatgcttgggtttggttttcaagggaaaaaatttgggaagttaaacctgcagcccgggggatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0106K23.1" temp_strand="+" temp_description="C06HBa0106K23.1  AC211043.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0106K23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="58551" stop="62175"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58851" g_stop="59079" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="229" r_length="229" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59080" i_stop="59488" i_length="409">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59489" g_stop="59681" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="422" r_length="193" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59682" i_stop="60266" i_length="585">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60267" g_stop="60352" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="508" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60353" i_stop="60523" i_length="171">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.906" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60524" g_stop="60655" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="509" r_stop="640" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="60656" i_stop="60827" i_length="172">
            <donor d_prob="0.785" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="60828" g_stop="60992" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="641" r_stop="805" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="60993" i_stop="61297" i_length="305">
            <donor d_prob="0.506" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="61298" g_stop="61870" g_length="573"/>
          <reference_exon_boundary r_type="cDNA" r_start="806" r_stop="1377" r_length="572" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0106K23.1" gen_strand="+" ref_id="SGN-U322354" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1378</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0106K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U322354" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58851" e_stop="59079"/>
          <exon e_start="59489" e_stop="59681"/>
          <exon e_start="60267" e_stop="60352"/>
          <exon e_start="60524" e_stop="60655"/>
          <exon e_start="60828" e_stop="60992"/>
          <exon e_start="61298" e_stop="61870"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCATTCTGCTCTGTTTTTTTTCTTCATCTTGTTGTTAAAAAATGATGGATTTGGTGAATTCAGTGCTTAATTTTGTGGTGCCACCAGCAAGTTTGGTTATGTTGGCTTTTTCATGGCCTGCTTTGTATTTCATCAACACTTGTGAGAGGATGTACAACTCGTTCTTTGGTGAAGACATGGAGGACAAAATCGTCATCATCACTGGAGCTTCTTCTGGTATTGGAGAGGTAAACAAAAAAAAAGAAGAGCTATACCTTAATTAGACTCGGTTCCAGTTTGACCATAGATTTTGAAATTGTGTTTGGGCATCTGAAAAAACTGAGTGAAAAAAAAAAAACCAAAAAATTGGTTTGGATCAGTTTTTAGAACTTGAAAATTAAATGTCTAGTTGTATTGATTTTACTCAGATTTCGATGAAAAAATGGTTTATTATATTTTGGGCAACACTCATTTCTTTCTAGAGGAGAAATTCCTAGCATGCAATGGATAGAACTATTCTTGAGTTTTTTTTTTGTGGAATTTGAGTTTTTGGAGTTACAAAGACGAATTTTTAGTTTGAAATTAAAGAAGCCCAAAGTTACTATTTGTTGTTTATTGAACAAGTGACAAATACTTGGTTTTGCTCTGTAAAATTAGCAAATTGCATATGAATATGCAAAGAAGAAAGCTCATCTGGTTCTGGTTGCACGAAGAGAAACCAGACTCTGGGGAATTAGCGAGAATGCGAGGGCATTAGGTGCAAAAAGTGTTGTTATAACAGCTGCAGATGTTGTCAAGGAAGCTGATTGTAGGAGATTCATTACTGAGACCGTAAACTTATACGGGCGTGGTAAGCAATTTGATTGATATATCCACTTGTTTGTATCTCCAGTTTTATGTTGTAAATAGTGTTAAAAGTATGTAGTTTTAACACCTCTTCTCTCATTGAAATGAGAAAGCAGTGGACACTTGCAGTCCCTCCCAACAATGTGTACGTCGAACCAAATTGTTAAAATGTGACCTTTTCAGTAATAAAAAATTACCAAGAGCGAGTTCAACTTTCTAGCATCGTGTTTTACAGTGACATTGATGTTACTGAGTGCTACTACTATCGCGAGAATATTATGTCCTATTTCATTTCTCATTAAGCAAATACAACTATTTGTCTAGGAAACACAATAAGATGTTACAACTATTTTGAAAAAACAAAAAAGTTGAAACTTACATAACATGTTATTTAGTTTCAGTCTCCAAGTTATGTTCTAGAGACGGATGAATTTGTTTCTGATTGCATTGGTCAATTGATATTTGTAAAGCACTTATTGGGAGCATGTATAGCTTGGCATGTTTCAATCTCGTAGAATAGCACCTAGTGACCAAAAGGTTGTCTGAATTTAACTCTGACGATAATCTCCGTTCATTTCCGTATTTTCAGTGGATCATCTTGTAAATACAGCAAGTTTGGGTCATACCTTCTACCTAGAAGAAGCCACAGATACAAATGTCTTCCCCATTTTGATGGTATGTGGAGCTTTTACTCAGAATCATTCACAATTATTTATATTCAGCTTTGACGGGAATGTATTGGTAGAATGATTTTTCTCTAAGTATCTTGTTGCAGGGGTACAACAACTTGCATTTTACTCCCAAAACCTTTTAAATTTGTAAATGTCTGAATATTGTCCATTTCAGGATATCAATTTTTGGGGAAATGTGTATCCTACCTATGTTGCACTACCTTATCTGCGACAAAGCAGAGGCCGAGTCATAGTCAATGCTTCAGTAGAGAGTTGGTTGCCCTTGCCAAGGATGAGCTTATATGCAGTTAGTGATTCTGACCATTGCTATCTATTCCTTCTAATGGAATTCGTCCAGTATGAGAATTGAATTACTCAATATTTTTTCGTCAGCCCCCTATTTCATTTGTCCCCAAGTGGTTCTTTTGTTGCATTTTCCCTTTGAGAGATGATAATTTGTGTGTCGTATTATAATATAGGCAGCGAAAGCAGCACTTGTAAATTTTTATGAGACCTTGAGATTCGAGGTGGACGGTGACGTAGGGGTCACAATAGCGACACACGGATGGATTGGGACTGAAATGACAGGTGGAAGATTCATGCTAGAGGAAGGTGCTGAGATGCAGTGGAAGGAAGAAAGAGAAGTAAGTCTCCCTATTCCGAGAAAAATTGTGTTACTTGCCCAAGATTGTGGACTAGTATTGACAGAATGAAGATGTTGATATTGAAGTTTAACCGGCTGTATTGGTCGGTCCTAAGTGTTAAATTAGAATGAACTTAACCGTACACAGGGTTATTACTTTTAAGAATCGGGCAAGATCGTATAAACTACGTTTGTCTTTTTCATTTATCATGGATTTCATTAACCTTCAATTTCTGGTTTTCTTGGAACTCTTGGTAATGTTTTATCTCTGTGCAATTAAAGTTGTTACTTGCATTCTCATTCAAGGTTCATGCATCTGGAAGTTCAGTGGAGGACTTTGCAAAGTTGATTGTATCAGGGGCATGCCGAGGAGATCCATACGTGAAATATCCGAGTTGGTACGACATTTTCCTTCTCTATAGAGTATTCACACCAAATGTTCTCCAATGGACGTTTCGGCTGTTACTTTCAAACCAAAGTGTCCGGAAAACTTCCCTCATTGGCACCGGAAGGCCTCTTCTTGAGTCATCCTCTCCTCCTCGGATGCAGCCTATTCCTGAGACATCCTCTCCTCCACGACAGCCTTCCTCTGAGTCGTCATCTCCTCGAAGACAGCCTCTTTCTGGTTCATCCTCTCCTCAGCATCCATCCGCTTCTCCTCGGAGACGTATGGGGCCTGTTCCTGTTCAGCAGGATTGAAGGAAGTAAGTGAAGTAATCACTTTAATTTAACGTGGTTGTGTTTTTTCTTTAGTCAAGATTTTGTGGATATCATTGTAAGAGTTCACAAGATACAACAAACATTCGGCTCAATAAAAAGTTGTACTTGGCTTGTTTAAGAATGCTTGGGTTTGGTTTTTCAAGGGAAAAAATTTGGGAA</genome_strand>
        <mrna_strand>CACCATTCTGCTCTGTTTTTTTTCTTCATCTTGTTGTTAAAAAATGATGGATTTGGTGAATTCAGTGCTTAATTTTGTGGTGCCACCAGCAAGTTTGGTTATGTTGGCTTTTTCATGGCCTGCTTTGTATTTCATCAACACTTGTGAGAGGATGTACAACTCGTTCTTTGGTGAAGACATGGAGGACAAAATCGTCATCATCACTGGAGCTTCTTCTGGTATTGGAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................CAAATTGCATATGAATATGCAAAGAAGAAAGCTCATCTGGTTCTGGTTGCACGAAGAGAAACCAGACTCTGGGGAATTAGCGAGAATGCGAGGGCATTAGGTGCAAAAAGTGTTGTTATAACAGCTGCAGATGTTGTCAAGGAAGCTGATTGTAGGAGATTCATTACTGAGACCGTAAACTTATACGGGCGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATCATCTTGTAAATACAGCAAGTTTGGGTCATACCTTCTACCTAGAAGAAGCCACAGATACAAATGTCTTCCCCATTTTGATG...........................................................................................................................................................................GATATCAATTTTTGGGGAAATGTGTATCCTACCTATGTTGCACTACCTTATCTGCGACAAAGCAGAGGCCGAGTCATAGTCAATGCTTCAGTAGAGAGTTGGTTGCCCTTGCCAAGGATGAGCTTATATGCA............................................................................................................................................................................GCAGCGAAAGCAGCACTTGTAAATTTTTATGAGACCTTGAGATTCGAGGTGGACGGTGACGTAGGGGTCACAATAGCGACACACGGATGGATTGGGACTGAAATGACAGGTGGAAGATTCATGCTAGAGGAAGGTGCTGAGATGCAGTGGAAGGAAGAAAGAGAA.................................................................................................................................................................................................................................................................................................................GTTCATGCATCTGGAAGTTCAGTGGAGGACTTTGCAAAGTTGATTGTATCAGGGGCATGCCGAGGAGATCCATACGTGAAATATCCGAGTTGGTACGACATTTTCCTTCTCTATAGAGTATTCACACCAAATGTTCTCCAATGGACGTTTCGGCTGTTACTTTCAAACCAAAGTGTCCGGAAAACTTCCCTCATTGGCACCGGAAGGCCTCTTCTTGAGTCATCCTCTCCTCCTCGGATGCAGCCTATTCCTGAGACATCCTCTCCTCCACGACAGCCTTCCTCTGAGTCGTCATCTCCTCGAAGACAGCCTCTTTCTGGTTCATCCTCTCCTCAGCATCCATCCGCTTCTCCTCGGAGACGTATGGGGCCTGTTCCTGTTCAGCAGGATTGAAGGAAGTAAGTGAAGTAATCACTTTAATTTAACGTGGTTGTGTTTTTTCTTTAGTCAAGATTTTGTGGATATCATTGTAAGAGTTCACAAGATACAACAAACATTCGGCTCAATAAAAAGTTGTACTTGGCTTGTTTAAGAATGCTTGGGTTTGG-TTTTCAAGGGAAAAAATTTGGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U321239" ref_strand="+" ref_description="SGN-U321239        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | hydrolase, alpha/beta fold family protein, contains Pfam profile PF00561: hydrolase, alpha/beta fold family | chr4:6269787-6273237 REVERSE | Aliases: T5L19.160, T5L19_160(evalue: 6e-134, score=474) genbank/nr: gi|15234891|ref|NP_192741.1| hydrolase, alpha/beta fold family [Arabidopsis thaliana] gi|7487731|pir||T04007 hypothetical protein T5L19.160 - Arabidopsis thaliana gi|4539006|emb|CAB39627.1| putative protein [Arabidopsis thaliana] gi|7267699|emb|CAB78126.1| putative protein [Arabidopsis thaliana] gi|21594223|gb|AAM65982.1| unknown [Arabidopsis thaliana](evalue: 5e-132, score=474)">
      <seq>ttcgacagggaaaagggagctctccaccttctcctcggtctctccgtcgcattatctatttatcaagtttgtctttttcatatttctttttacctgtacaagttgattggaggaggaattttgggtggttttcttcaccgatctcttctccaagaaatgtcggctatttcgaatttcacggcgtgccggcgtttccaaaatggagctgcattaacaaaagactcacctggggttggtttgattactaacaagtttctggcgaccaagatttctacgccattccacaaggtgtctctcgtatgttcaaaaaggacgtttaaaggttcaaatataagaatgacaatgttagatgacaaactttccagcgggaaggttgttgtgccatctgaagtgctggcatatgagctcgttcaaggagcaaaagtaaaatggagttatattatggagggatcgttgcctgaaccaccgactgctgttctcttgcatggtattcttggcagcaggaaaaactggggaagctttgctaggagattggcccaagaatttccgaaatggcagtttctcctggtggacttgcggtgccatggtgattcagcatccctcaagaagagaggcacacatacagtcgcgtcagctgctcttgatgtcctaaagctgcttggccagctcagactgactccccgagttgtagttggtcacagctttggaggaaaagttgcattgagcatggttgagcaggttccaaagccccttgcacggcctgttagagtctgggttctagatgccactccaggagaggttcgagctggtgcagatggagatgatcatccagctgaattgatatcatttctgagtaaattaccaaaagaggtctcttcaaaacgagatattgtggatgctctgatacaagaaggtttttccagggatgtagcacagtgggtggtaactaaccttcgtcaaaccaacactgctggttcatctccttcacctttgtcatgggtgtttgatctcaaaggtattgctgaaatgtatcaatcatatgaagaaacaaatctgtggaaaattgtggaggatgttcctcggggcgtgcatgttaactttttgaaagcagaaagaagtttgcatagatgggctcttgaggatattagaagaatccatgttgctgaggaacaggctgtagaggaaggaggtggagtcgaaatgcatgtcctcgaagatgcaggtcattgggtacatgctgataacccagatgggctattcaagatcctttcattttccttccaaggattttaggcccaaggaattctggcattgaccctatgacctgaatataggttgtgaaccccttgcaacctataagattgcagaaagatccaattctttttgtagtatagtgtatatcatctcattcattatgatttgctcgttctagaatgtgatgtgcagaaattagtttggtggggctgtttcacctttaaagctgagtacacgatacagaattgtgcaaagaacttatttacaagttatgtcctgatggatcattaaacaccagctttactgggtaatgtaagctcatttatcttcttcaaatgaatatgattctcccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0106K23.1" temp_strand="-" temp_description="C06HBa0106K23.1  AC211043.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0106K23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="76697" stop="61955"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76397" g_stop="76110" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="288" r_length="288" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76109" i_stop="75059" i_length="1051">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.807" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75058" g_stop="74951" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="396" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74950" i_stop="73933" i_length="1018">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73932" g_stop="73906" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="423" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="73905" i_stop="71926" i_length="1980">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="71925" g_stop="71835" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="514" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="71834" i_stop="70671" i_length="1164">
            <donor d_prob="0.582" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="70670" g_stop="70627" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="515" r_stop="558" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="70626" i_stop="69328" i_length="1299">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="69327" g_stop="69229" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="559" r_stop="657" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="69228" i_stop="67734" i_length="1495">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="67733" g_stop="67676" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="658" r_stop="715" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="67675" i_stop="67585" i_length="91">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="67584" g_stop="67532" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="716" r_stop="768" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="67531" i_stop="67047" i_length="485">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="67046" g_stop="66945" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="769" r_stop="870" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="66944" i_stop="66118" i_length="827">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.097" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="66117" g_stop="66052" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="871" r_stop="936" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="66051" i_stop="64295" i_length="1757">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="64294" g_stop="64173" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="937" r_stop="1058" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="64172" i_stop="63516" i_length="657">
            <donor d_prob="0.674" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="63515" g_stop="63344" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1059" r_stop="1230" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="63343" i_stop="62633" i_length="711">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="62632" g_stop="62256" g_length="377"/>
          <reference_exon_boundary r_type="cDNA" r_start="1231" r_stop="1607" r_length="377" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1608" polyA_stop="1639"/>
      <MATCH_line gen_id="C06HBa0106K23.1" gen_strand="-" ref_id="SGN-U321239" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1607</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0106K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U321239" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76397" e_stop="76110"/>
          <exon e_start="75058" e_stop="74951"/>
          <exon e_start="73932" e_stop="73906"/>
          <exon e_start="71925" e_stop="71835"/>
          <exon e_start="70670" e_stop="70627"/>
          <exon e_start="69327" e_stop="69229"/>
          <exon e_start="67733" e_stop="67676"/>
          <exon e_start="67584" e_stop="67532"/>
          <exon e_start="67046" e_stop="66945"/>
          <exon e_start="66117" e_stop="66052"/>
          <exon e_start="64294" e_stop="64173"/>
          <exon e_start="63515" e_stop="63344"/>
          <exon e_start="62632" e_stop="62256"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGACAGGGAAAAGGGAGCTCTCCACCTTCTCCTCGGTCTCTCCGTCGCATTATCTATTTATCAAGTTTGTCTTTTTCATATTTCTTTTTACCTGTACAAGTTGATTGGAGGAGGAATTTTGGGTGGTTTTCTTCACCGATCTCTTCTCCAAGAAATGTCGGCTATTTCGAATTTCACGGCGTGCCGGCGTTTCCAAAATGGAGCTGCATTAACAAAAGACTCACCTGGGGTTGGTTTGATTACTAACAAGTTTCTGGCGACCAAGATTTCTACGCCATTCCACAAGGTAAGTAATTTGTTTTCCTGGTTTTCACCAAGTTTGGACTAATGGGTAACCGGTATATTAATGAAACCATTACTCCTTCGTTATAAACGATGTTAACATTAAAAAAGGTCCAATTTTTATGCTTTTTTGGTATCTTGCTTACGTGTTTTAGCTTTTATTAATGAACTGTGTCCCAAATCTAAACTAGTTGAGGTCTATATAAGCTAGTTGGTGTCTTTCTTTCCTTTTGTAGCATTATTAATGAACAATGTTGCAATTCTAAACTAGTTGAAGTCTATATATGTCTGCTCTATTGGGGCCTGTGGAAGATCATTCATAGTAGTTTGATTATATGTAGGCTGTCTGTTTATGTTTTTCCATAGGAATGCAAATGCTATGTGAATACCATGGACTTCTCCTGGTTTTAGTGTGATACCTTAGAATTTGGCGGCACGTTTCTTGATTAAGCTGCTGGTCCATTTCAGAGTTATTTTACTATTTGTGCTATTCTGTAGTTTTGTATGATGTTTTTAGAAGTGACTGGAATAGTCTCAGACTGTCAAATAATGACATGTTTATTCTATTTCTCGAGCACATGTGTGAATTCGGTGACTCTGGTTTCTTGCTCATATTTCTCGATCATCTGCGTGAGTGAAAAGCAGCTACCCACTCTAGTGGTGCTCTTCTTCTTCATAGCATAAAAGCTTTAAATGGAAATTTCTTTTACTTCCATATTAATGACTGAGGTCATTAAGTTCGATGGTTTCTATGCTCTAGTGATAATTTTCTCATCTTGTTTTTAGTTTTTTTTGTCACTCCCTCCATTTCAAACTAAGTGGTGTTTTTACCTTTTCATTTGTTTCAAAATAAGTAAAAATACATCTTACTTTCTAGTAACGAGTAGTTTTCTTAAGGGGCGTGCCCAAGCTAAAAACACCAATTATTTGAAATGGAGGGAGTAATAATTTAGAATTTTACGCGGTAAATTAAATTTTATAAGTGATCCGATTTAAAATAATGAATGGCTTTGCATATTCTAAAGGGCTGTTGTGGTTCACTTTGCTCTGCTCAGGTGTCTCTCGTATGTTCAAAAAGGACGTTTAAAGGTTCAAATATAAGAATGACAATGTTAGATGACAAACTTTCCAGCGGGAAGGTTGTTGTGCCATCTGAAGTGCTGGTAGTGGATCTGTGCTATATCTCTTATTATCAAGTACTTATTTTGGAAAATTTGGAGTTGACTTCTCTTATACTTTTGGTAAAATTGTTGGTTCATTAATTTGTGACACTTACATCAGCACTTCTTCCTATCTCTAGAAGGATTGTACACAAAAATTTGATTCCATAATGGTGCTAAATTTAGTAAACATCATCAAACTTTTTTCTATTTGAATACAACTTTTGAAAAAGTTAGTTGACATGATAAAAGAACCTTCAGAAGGTACTTGAATATTAGAGAAAGTTTATCTTGGGAACTGAAGAAAGGAAGAGATAGGAAGGAAACGAGAGTGAATTTTCTCTTCTCTTGTTTGGTTGGTAGAGAAAGATTTGAGGATCATGGAGTACGGAAAGATCTTTTCCAAATTGGTGGCACGAAGCTGTGTTCTCTGTTTCTTCCTAACAATAGAAAGGAAGTGACGGCTTTTTCTCTAAATTTTTCTATCGTATTTTCTCTTCCCTTTCTCTGTTCCAAGCAAACAGTTAAGAAATGATATTATTTTTTACTTTCAATCTACACTCTTGTTTTTCAGATGAAACAAAAATGATTACACTGTTTTAAGTTTTAATACTTCTATACAAAAGTTATTTACGTTAGTTCAATGGATATCTAAAATCTAGAGGAAGGTAAATTATCAAAAAGTTTAAAAGTAAAAGTTTTCAGATGAAACAAAAATGATTACACTGTTTTAAGTTTTAATACTTCTATACAAAAGTTATTTACGTTAGTTCAATGGATATCTAAAATCTAGAGGAAGGTAAATTATCAAAAAGTTTAAAAGTAAAAGTTAAGGAAAATATATATCTGTTTTCACTTTCAATAAAAAAGGGAGGTATATCTGTTTTTTTCTCAAATTACGTAGTATTAAAGTAGTAATTGTTATTCGCTATAAATGTAGCAATTGAAGAGTGTGACTACCAAAGTTGTTTGATGTGCAACTGAATCAATCTACTACTGATGAGATTATTTTTCTATGCAGGCATATGAGCTCGTTCAAGGAGCAAAAGTAAGTCTCTTTTTTGAGTTGAAATGTAACTAATTTATGTTTGCTATGCTTTTTCTTTTTCCTTTCCCTCCTCTTTATTTTTTTTCACATTTGTATTTATTTTGAAGTATGCATGTGGGATATATCTGTTCGGAAAGTATTTTACAGCTGAACAGTAACCTAAGTATTTGAGTTGGTATGAAGTGTATAGATGGTGATATTCTGACTGTTCTGGGCCACGTCAAATTATAGTAGAAAAATCTGAAAAGTATTGCTTTAATCTAGTGGATACGGAGTGCAGTCTAGTCCTAGACCTATTTTTCTTTTTAGATTTTTGTTTTGTTTTTCCTTTTCTTTTTCTTGTCCAATACGGACTATACAGTGAATCAGATCTCCGGTCAGAAAAAGAAGCATATCTTTTCATGAAAAACTCTTGCTCGAGTGCTGCTACCTCTGGTTGGTGGAACATATATATAAAATTAGACACTTAGCTATTGCGTGTCATACACTTTTTGGTTACTGCTTTGTTAGTGAAAGGACACCTTAAATGGGTATTGTTTCGTGTCACAATATAACTGTTTGAGTTCATCTGAGAAGCAACTATGTGGTATATGATTTTAGTTGTATGATTTTAATCTAATGAAAGCCAACCACTATATACATATTTCAATCAATCAATAACCTTAATTACAATCTAATTGAGGTCGACTTTGTGAGTCATCTTTATACGTCCCTTACTATTCTAGGACATTTGGATTTTCATTCCAAAGTATTGGTAAATATTTGTCTGTCTCACAGCACTGACCCTCATATGGGACAATAAGGCTCTTTTTTTTTCCATCTGTAATATTCGGGCACATCTTATTCCATGATGTTAGTTATAGATTGTCTCCTAGGGCTAGTTAAGAGGTTTCCTAGATCCATTCTTATCTCTAATATGCGAGTTATTGCATAGGAGCGGGGTTTTTACCCTGTGTGCACCCAAAGGTAGCGGCTGCGGGTTTCCCTTGTCATAAGAATAATTAAAAAAACTCTCATCTCTACGCGGACTCCCATGTCAGAATAATTCTAAGATACTTGTACAAAGAGTGGACTAATTTGGTGTGTCAGCAACAACAAAGGCAACAACTAGGGTTTTATCTCAACTGGTATCACCTGTATGGATTTTTTTTACAATTGTCTTCTCCTCTTAGCGAAGTTCGCATCAATATGCATATTTCAAATTTTAAAGTTTTTGGTGATGGGTACACAGGAAAATGGGTTACTTTTATCATTTTGGTTGTGTTGTTTTCATTGTTGTTGTCATTGTAGCTCTTATTATGCTGCCATTGTCATTATTGTTTATTATTCCTAAAGTTGTTAATTCATCCCTGTCAAGCAATTTTCAAGTATAAACTTGAAATAAAAGAAGCCCCAAGGGCCTTGGTTCTAAGGCAAAGGTTGTACAAGAAGGGATGTGTGATAGGTAATAGCATAAAATTGAATCCTGTCCAGTGAACTAAGTATGGTGTTTAAGTAGATAGGATCCCATTATCCAATGGGTAATGTAGATGATAATATCAGAGTTAAGAAGATAAATTTATAAATAAACATACCAAATAGTTCAATGAATAACATATATTCCCCTGAGACATGACAATGGACCTCTCATTCAATTTTTAATCATCCTCCTCTTCTTTCTTGATATAACTTTGGGGAGACATCCCCTTTTTGCTGGATATCATCATAATTATCAAATTTATGACTTCAAAAAATGTTTTTGTAGTCTTAAGGAACTAAGATTCATTATTCCAACAGATAAAGTTGTTCAAAACTCTAGCTTTTTTCCATTTTCATAAGTTCTGTACATTCAATCATTTTTCAGTCCACAATCTATTTACTTCACTTATTCATTGATATGCTAAATAAACTAGTAGAATTGGTAATTTCTCTAGCCCATTAAACGTTTTTTCTGCTGTTTAACACGTATATGCCTTTGATAATTGGAACTTGGATGTATAGGTAAAATGGAGTTATATTATGGAGGGATCGTTGCCTGAACCACCGACTGCTGTTCTCTTGCATGGTATTCTTGGCAGCAGGAAAAACTGGGGTAATGACTCATTTAAAGATTTGTAACATTTCGGCACAACACACAAATGTCTTGTGTATTCACTGAATTCTCATGATTCTTTTAAAGTGCCTTGTTTTTCAAATTTCTTATCCTTGTATCTCTGAGCATATATTAACATTGCACATGCAGTGCTCGGTCAAGTCTTCTTATGTAACTAGCAGTTGGAATTTTGCTTGAAACGAGAACAGTTCCAACACCAGAATGTCTAAATGAAATTGTTATCATTTCCAAAACAGAGAGGAGTTGTAGAAACTTGAAAACTAATTCATGTACCATCTAATTCCCTCAATTTTCCAAATGGCACGGAATAATTCTTTCCTTACCCATTGCTTACCTCTTTATGAAATTAATAACCCATTCCATATTTCCATCTGCACAGAGTAATGTTCTATGTCCTTAGATTTCCATCTGCACTGAGTAATGTTCTATGTCCTTAGTTTTCTATCTTGATGCTCTAAATTGCACAATTGTTACACCTAGTAGCAGCTGATGCTGGTTGAGTTCAATTTGTTTCAGTTTTATTGGTGATTGCTGATTAGGACCATCTTAGCTATACTTCAGAAACTCTTTCTTGGATAGGAAAAACTTGCTTTCGTTTAGCAGAAAAGTTAAGGGAGTGTTGTGACAGAGATACTGGAAAGGAGATTCCATATTTTTTTTCTTTTCACCCGACCATGAACCAAGTTTCATGATGCATCATGCTTATTGCTCTCTGTGAATTCTCCTTTTATCTTCAAGTACAATGGGTTTACTCAAATTCTGTTTCCCCCTTTTTGTTTTGATATCTAACTGTGTTGCAAGTTCTTCTGCAATGTACTTCAGAATCCTGATAAAGAACCTGTAGTTTGAGCCTTGAGGAAGTTCATATTACAATAAAATGTAAAACTATTTGCTTAACGAAAAGACTGATTTAAAAGTGTCTCTATTGCTGGAGTGCAAGGGAAATTTTACATCTTGTGGCATAGAGGTTCTTATTTCCATAGAGAATTACTAGTTAATTGCCGACTTACTATTGCTTTAGATAGTTTTCTTTTGATTTCTATTATTTTTATTTTTCTTATTCCTCCAATCTGCTCAACCAATTTTTTCGTTCTTCAAGTTTCTTCTCGTCAACCTTTTTTCATGACAATCTCAAATTTTCAGGAAGCTTTGCTAGGAGATTGGCCCAAGAATTTCCGAAATGGCAGGTAGTAGAGATAAGCACTACTTCTTATCCCTTCTTATATACGCAATATCTTAAAGAGTTCTACATTATGTTTACCTTGTCTCAATTGGACAGGGAGTGTGTTTTGTTGCATGTTGTTTACTGTTGGCCAATTCAACCCCCTTTTCTTCTATATTTTATCTGTGAAGAATGAAGAGAAAGGAAGATTTGATCTGGCATTACTACCCTTGAGAGATAGTCTATTCTTATATTCGTAAAGCTTGGAGACATTGAAAAGCCCAAGAAGATTCTTTTCACATAACCATAGATTAGGCAATTCCCAGGCTGCTCAATTAGTGGTCACTGAAAGGGAAGGAGGTCTCAGGTTCAAATCCCAATGAAGGCAAAAAACACTTGGTGGTTTGTTTCCATCAGTCTAAACCATGGTTGTCAGGGTTACCCGTATCTGCGCTAGTAGAGATAGCAAGTACCTAGTGAATAGTTGAGGTGAGTGCACGCTGGCCCGTACACCACTGTCATTAGAAAAAAACATAATCATAGATTATATAAAAACAACACCTGAGTGTTTTTGTTGAACTTTTGGATAAGTGACATCCTCTTGTCTGTTCTTCAATTCTTTCCTGTATACTGTATTGAGCTGCTTACATTTTATCACTAAAATGATACGTCCTAAAACAATTTCTTTTTGGTTGTTGGAAGACAAATATAGGAACAAATTCAATTTCAAACTTCATTGAAGTCATTAATTAACATCCTATAGAAACTCTTTTGGGAACAATAAGTTTGGAGCGCAATGATGTTGGGGCAACTTTTGTTGTAGGGGTGCTGTATCATATGTGGCTACGCGTCAAGTCCTTACCTGAAAACAGTGCTCTATTTTTATCGATTTATTTGATCAAAAAGGTAATATTAAAACATATAGTGAAGCTTTAGAAAATAAAACAAAAACATATGAAGCTCCCAATTTTTTGGGGTTCTGATGTGCTTTATTACCCTCCTGAGAGAGGCAACTAGAAACAGATTGTGATGTATTGAACTGTTCTATTTGAGCTTGTTTGAGTTTTCCTGAATATTTTTCATTAACTCTTGGAAGATACTATTAATTGCGGTCTCATATTCTTGAACCAATATTTTCTCCTCTTTGTGGGGATGTCATCTTGAATTCATTTGCTTTTGATGCCTTTCGCCAGTTGTTGTCCTCAAAAATCACGTTCTTCTTCAACTGATTGTTGATATTTTATGATTGACTTGTTTTGATATGATATTTGGGTGATACTGATATTGTTGCGGACAGTCTTACAGTAGATTTACTTTTCTGCAGTTTCTCCTGGTGGACTTGCGGTGCCATGGTGATTCAGCATCCCTCAAGAAGAGAGGCACACATACAGTCGCGTCAGCTGCTCTTGATGTCCTAAAGCTGGTATAGTTTCTTGACCATGACCTGTTGCCTTATGCAAGTACTGTATTTTCTTGAGTGCCATTTTATATGGCATCCGTATCACTAAGCTTTTTGTGGGGCAGGCATGGAAAATTTTGACAGACATTATCAGTCAGTCCTTGACTGTGCTTCTATTTGTTTCGTTGAAGTTTAGAAGAGCATGACCAGTTGCATTATTCTCAAATGTATATTTTTCTTTGAATATTGATAAACATATTATCTTTCTGCAAGTAGATATGGGTCTTGCATGCACACTTGTGGATGTTTACATGTTTCATGTGGAAACATTAGCTATGGTCATGTCATCCTAGAAGCCCCCATGATTGATGTTGTTCCTTCCGTTATTGTTGAACTTTTTTGCCCTCATAGTTGACTTGCAATTCTAATTCTTTCAGTTAGATATCCATTTCCTATTTCATCCCTTTTTTTGTGGGATCAGTTCTCTACTTAGTCAAGTAGACAACATTCATTATTATTGGGTTCTCCCATTACATTCCCAACTGCTTTCAAATTTTCAAAGAGGGGACTAGCTTCATCTTCAAACCCATGAAAGTGAAGCTTTCTTCATCCATCTAAAGGCATCACATCTACTGGTGGTTTTACAATGACTTGCATGGCTTTTCGTCGTCACAACAATGGGTAATGAAGTGTCAACCTTAGTGTTGACTGAATGAATCTTTGTTGATCATCGAATGATGTTCTGATTCCCATGAATTTTCACTACATGCTTTGTTTGGACTGAATCACAAGATTTCTGAGTGTTAGTAATCTCTGTTCTCCCCTTGGCTTGATTGGTCAAGGCAGTTGACCTGTGCAACCTAGGTGAGAGGCCAAGATATGTGCATCATGTGATTTTTCCACATCAGCTAGGTGTCACCATCTCTTTTTGATAAGGTAAATAATTTTATCAATATTGGGAAATCCCTGCATACAAGATGTAGAGAAACCTACTCTAAAATATGATTCTCTACGAAGTCACCCACTCAACTAAACAAACAAGAACCTATTTGTGCAACAAAAGAAACTAGAGACAAGAAGCTACTCTTCACATGTACAAAATCACCCCAACCCCTTCGAAAGCTCTCCTATCCCTCTCCCTCCGCACAACCCATATACGTCTCTGATAAGTGTCCTGGCCAACTATCTTATGGCCTATTTGTTAATTTGCTCTAAGATGCTGCATTTTATGCAGGATTATTTTTTTGACGTGACAAGGCTAGTTTAATTTGAATCAAATATGGGTCCCGCAGACCTGTCCAAGATGTCCACTCTATGTACTCGACACATGTGGTCCTTCCCTCTGTGTTTGTGTTACATTGTCAGTGACTTACATTGTTGTCTCTTATGATTCTCTTGTTTTTCTGATTTTGTGTTGGGTCAAATGGTTCCCCATTTTGCCTCTTCACTTCTTGCCTGAGATGTTAACACTATTACGGTAACACATTGCTTGGGCTCAATCTTTATTTCTTCTGTCTAGCTTGGCCAGCTCAGACTGACTCCCCGAGTTGTAGTTGGTCACAGCTTTGGAGGAAAAGGTAACTTTTAGCTTATTACAGTGAAAAGCTACTTGGTGAATTCAATTGATATTTTGTTGTTTAGACATTGATCTTCCTTATTACTATGCAGTTGCATTGAGCATGGTTGAGCAGGTTCCAAAGCCCCTTGCACGGCCTGTTAGAGTAAGTATTCTGTATGAAGACTGTAAAAGCATGCTTGCAGTAATATCAAACACAGTTTTGGATATAGATTGGAACTTGTGAGTGGTTAAAGCAATGTTAAGAACTCAGTTAAGGCAGTATATACCATTTGCTTCACAATTCTCTCATTTTGAATGGGTGATATCGGTAATTGATCTTTACGCATAAGTATCCCGTAATAAAATTCTACAAGCATACTTGAGATAATATCAAATACTGTTTCAATATAGCTTAAACTTGTGAAAACTTAAAAGTAATGTTAAAAGCTCAGTTAAGGCTATATACCATTTGCCTTCCAGTTTTCTCGTTTACATATGATGATTTTGGTAATTGGCTTTCAGGGATGATAATTTTCTTTTCTATTGCACTTTCTTTTGTCTTGCAATCTATTTTTCCATCATGTGTTTTTTTTTCTTTTTCTTTCCACTCCAAATTCTTAGAAGTAATTCAAACTAATTGGGTCATAGGTCTGGGTTCTAGATGCCACTCCAGGAGAGGTTCGAGCTGGTGCAGATGGAGATGATCATCCAGCTGAATTGATATCATTTCTGAGTAAATTACCAAAAGAGGTAAGTCCTTCTGGTGATTTCACTTTGTATGAAAATGTCTCCATGTATGTTGCTTTACATGAACCTTAACAAACTTTATTCTCTCTACTTGTTAACTCTCCATGATATCTTTAGTGTGTCAATATAGATACGTGTTCATTTTAGGATTTTTGAGAAGAAATTGGGATGGGAGGTACAGTGGGCCTATTAGTGTGTTCATTCTCTGATGTGTATAGTTTAAAAGAGCAAAATAGGATTGCATTCTGAAGATAGAAATTTCTTGTTAAGTGTGTCATGTTTTTTTTTGTACCTCGCTTGTATAAATATTTGATCAAAATTGTGGATGGCTGCTCCTACATATAGAGTTGAGATTTGCTTAGTTATTGTAAACAATAGCTATCTCCCTCTTTGATAATAAATGTTTCACCTGTCCAAAAAGAATTCGCAAGAACTACTTTAGGTTTAAGGTATGATTGATATTTAATGTAATATGCTTACAATGACAAAGTAGTTTTTGGTGGCAAAAGCGTGTCCATTAGTTTGGAAGTAGAAGCTGAATGTGTCGGAGCAATGGAGAACAAGCCTTTCTCCTTCATATTTTACCTTGCTTTTGACTAATTCTTCTGTTCTTGCATGTTGATATTGTTTGACACTACTCTTGGTTTATAACTTGAAATAGCTTACAGTGTTGTGTTGAAACTTTATTAGCCTAGGCTATACAATTCACTCACTCAACTGTTGGTTCTCCTTCTCATCTCTCTCTCGTTCTGTCTTTGTTTTTTTACTGATATATTCACATAATCTGTATTGACGTCAATTCTTTTTATGAATAATATTTTTCAAGGAAGGTCTCTTCAAAACGAGATATTGTGGATGCTCTGATACAAGAAGGTTTTTCCAGGGATGTAGCACAGGTATCCCCTGGCCTCACATATTTTTCTTTCTAGGAATTCTGAAAGGTTAAACACTTAAACTTCAACTTTGCAAAACTTAAATTGCTGTATAAACGAAGACATTTTTCTGCATCTAGTGAGGCACTGAGCTTGATATTGAGTAACTGAGGAATGAGATCTCTGAAGTTCGTTAGAAACATTATCAATGTACTTCTTTAAGTTGTTGTAATTTTTTCCACTCTTCACAGTGCATGGAGAGTGAGCCAGTATATATCTCTTGACTACTACTGTGAAAGAAAAAGAGAATGATGATTTAGTAGGCCTACCAAGGATAAGTTGTCCAAAACAAAAACGGAAAAGAACCGTACCACAATAGTGACACTCCCCAGTCTCTCTTAGCATCTTGTAATGGACCTATAGCCTTAGTATGAAAGGCAGGAGAATACCCTATCTCGAATGCCTCTGACATGTCTACCTGGGTCCTGGAAAGATACATGTGATATGCCCACCGGAAACAATTGCCAACTTTGGGGAGAAACTTCTAATTTTACAATATCTTAAGCCCCTTAGTCAACTCTAACCAATATAAGTCCTTTATAGTAGCAATCAATCTCTTCCACCTTTCCTTTCTAAAGAGAGCTTATAGAAAAACATTGGGAGTCTTGTTTTTCCATATGATTTATTGGAAATGATGTTCTTGAATTTTGTTGGTTAGAATAGGAGACGATGTTTCACTCTACACCATTCAAAATTTAAACCGTCATTGCTGAAGCTGGATTCAGAAGTTAGAGCGCACGGGTTCAGAATTCTTGTGCTCCTATTATTCCTCTAATGCAGCTAGTTTGATTCTTTTTTTAATAATACACATAGGGGTCGTTTTGTATGCTGAACAAGCATAGATAGTAAAAGAATAAAAAATTAATACTGCCTTATCCCTTGTTTGGTTACTAATCCTAAGATAAGTTATACTATAATTAGTAATTATACTGAGATAAGTTAGCCGGTGGGCGGAATAATAGTACCGGGAATAGTTATCCCTCGATAAAACAATGAAAATGACAAAATACTCCTGAGGTCCCTACAACCCTTTTTCTGTATAACGTGGTGGGTATTTTTGTAAACAAACAATTTTTCTTATAAAGTATGCAATGTATGTTATTTTTAATATAACAAACTAAACAGTCAATAAGAAATAGTACCAAGATAATTGATCACATCATCACTAATCCCAACATAACTTGTCTACGAACCAAATGACCCATAGTCTCTATTCCTTTCACTTAACATATAAGGCCAGAGCAAGGCATAGCGGATTTCACCAAACTTACTGCGTCTACACTAGATATGCCTGTCTTCACTGCTCAAAGTGGATGACCTCATCACGCATGCATTTAACACTATTTCTTTGGTGCAAGAAAAGGTTTGAATAGAATAGGGGAATTCAGTCGAGGGAAATGCAATTAACACTAGTGCACAGTCCAAAACTTAGTGGATGCCTGACCCTCTATCCTGTCTCCACTTAAATATCAAACTTTTGTCCGTGGCCGCGTTCAAAATTGCACAAGTAGCATGTAATTGTTTGTAAAATAGATTTAGTAAAGGAGTATATCATGCAGTATGTCTGACTAAAAGTTCATCTATAAAGGCCATCATTCCATCAAACATTGTTCATTACCATATTTCTAACTGTTGATTTGCTTGCACATGAGACATGAGTTGGCCCAGTTCTCATTTTTTTCCCAACTGATGTCTGACAGTTACCTTTGTAAATTTTGCAGTGGGTGGTAACTAACCTTCGTCAAACCAACACTGCTGGTTCATCTCCTTCACCTTTGTCATGGGTGTTTGATCTCAAAGGTATTGCTGAAATGTATCAATCATATGAAGAAACAAATCTGTGGTAGGTTGCTCATGTCTGTTTTAAATTGCAGATTTTTGTATGATCATTCTTTTGGCTTCTTGTTCATTCCTCAACTGTTACAAGCGTGTACCAGTTGTCCAATACTGGCGTAGCCTGGACATGTACTAATTGTGGTTCAACAAATTACAAGCATGCACACCCTCTTTATCTTGTTGCTATAAATTAAATCAAAAGATTTTAGAAAAAAACATGGAAATCTTGATAAGTTGCAGGATATATTATGACTAGATTAAATTTCAACATTAATATAAGAATAGCAAGACGATCAGGAGTTTTTCTTCTAGGGGCAATGTACTGGGGGACTGGTCGCTCAGCTCAATGCTAGCACAGCTATAGAAAAAAAAAACTAAAAGGGAAGTGGAATATCTGGTATTATTGGAGCCTTAAAAAGTATTACGTATCGACATGCTAAGAATAAATGTGCACTGTAATAACTTATTTTATTCATATGATAATGAATGTGTGGCTTTTGCGAGGACTAAATTGAAGCTGGTTAAATACTTTAATTGTAGGTGAGTATATCAATGGTCTATTTCATATCTTTTTTGTGTTTTGTCACCAAGTTTCTAGTGGATCAAATCCATGGCTCATTCCCCCCAAAAAGGAGGGAATACTTATTGCAAGATCTTCTTGCAGGAAAATTGTGGAGGATGTTCCTCGGGGCGTGCATGTTAACTTTTTGAAAGCAGAAAGAAGTTTGCATAGATGGGCTCTTGAGGATATTAGAAGAATCCATGTTGCTGAGGAACAGGCTGTAGAGGAAGGAGGTGGAGTCGAAATGCATGTCCTCGAAGATGCAGGTCATTGGGTAGGTTGCTTCTTTCCTACACATTTCTTTCTTCTGTATGTATATATTTTGTTAGTTCTCAAGACGCAGAGTGTTTTTATTTTAAAATGTGCATCAGAGTTGGAAGCTGATAATTTATCATTCTTCCTCCCTTTCAAATCTTGAACTGTAGTTTGATTACGTTTGGAGTTTAGGAAAGAAAGATAAGACTTTTTTGTGTCTTGAACATGTCATGAGATTTCTCCAGCTATAAAAGCATGTCATTTAGAGTAAAAGTTAAACTGTCTCCAAATATAGAAAGGTGTCATTCTGCTTTGTATGGACTAATAAGGAAATAATGCCAAAGAAAATAGAATGGAGGGGGTACCTAGGTCGACTAGAGTTCATAAAATACCCGATGAATTGTGTCTCGGGAACTGATGGCCTCATCATTCCTTCTAGTGTTGGACTATCTACCCTCTTCTCCCAAACCGATATACAAAGAATAGCTAACCTGGTTGAATCCGGAAAAACAACTTTGCGTTACTAATGCTATCATATTCTGCATCTTTGGTTTCCCATTGTGTGGCGATGAACTGTGTCAAACAGAGCTTCTAGGAAGACAATTATAATTCTGATTTCTGACAGACAACAATGAACTTAGGGTACATGTTACTTGCTGTTTACATAAATTGTACAATTTTGCATCGCTTGATCCTTTGTCCTAATGCGAAGTATGTATCTTTTTTCCAGGTACATGCTGATAACCCAGATGGGCTATTCAAGATCCTTTCATTTTCCTTCCAAGGATTTTAGGCCCAAGGAATTCTGGCATTGACCCTATGACCTGAATATAGGTTGTGAACCCCTTGCAACCTATAAGATTGCAGAAAGATCCAATTCTTTTTGTAGTATAGTGTATATCATCTCATTCATTATGATTTGCTCGTTCTAGAATGTGATGTGCAGAAATTAGTTTGGTGGGGCTGTTTCACCTTTAAAGCTGAGTACACGATACAGAATTGTGCAAAGAACTTATTTACAAGTTATGTCCTGATGGATCATTAAACACCAGCTTTACTGGGTAATGTAAGCTCATTTATCTTCTTCAAATGAATATGATTCTACCA</genome_strand>
        <mrna_strand>TTCGACAGGGAAAAGGGAGCTCTCCACCTTCTCCTCGGTCTCTCCGTCGCATTATCTATTTATCAAGTTTGTCTTTTTCATATTTCTTTTTACCTGTACAAGTTGATTGGAGGAGGAATTTTGGGTGGTTTTCTTCACCGATCTCTTCTCCAAGAAATGTCGGCTATTTCGAATTTCACGGCGTGCCGGCGTTTCCAAAATGGAGCTGCATTAACAAAAGACTCACCTGGGGTTGGTTTGATTACTAACAAGTTTCTGGCGACCAAGATTTCTACGCCATTCCACAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCTCTCGTATGTTCAAAAAGGACGTTTAAAGGTTCAAATATAAGAATGACAATGTTAGATGACAAACTTTCCAGCGGGAAGGTTGTTGTGCCATCTGAAGTGCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATATGAGCTCGTTCAAGGAGCAAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAATGGAGTTATATTATGGAGGGATCGTTGCCTGAACCACCGACTGCTGTTCTCTTGCATGGTATTCTTGGCAGCAGGAAAAACTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCTTTGCTAGGAGATTGGCCCAAGAATTTCCGAAATGGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTCCTGGTGGACTTGCGGTGCCATGGTGATTCAGCATCCCTCAAGAAGAGAGGCACACATACAGTCGCGTCAGCTGCTCTTGATGTCCTAAAGCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGCCAGCTCAGACTGACTCCCCGAGTTGTAGTTGGTCACAGCTTTGGAGGAAAAG...........................................................................................TTGCATTGAGCATGGTTGAGCAGGTTCCAAAGCCCCTTGCACGGCCTGTTAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGGGTTCTAGATGCCACTCCAGGAGAGGTTCGAGCTGGTGCAGATGGAGATGATCATCCAGCTGAATTGATATCATTTCTGAGTAAATTACCAAAAGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTTCAAAACGAGATATTGTGGATGCTCTGATACAAGAAGGTTTTTCCAGGGATGTAGCACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTGGTAACTAACCTTCGTCAAACCAACACTGCTGGTTCATCTCCTTCACCTTTGTCATGGGTGTTTGATCTCAAAGGTATTGCTGAAATGTATCAATCATATGAAGAAACAAATCTGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATTGTGGAGGATGTTCCTCGGGGCGTGCATGTTAACTTTTTGAAAGCAGAAAGAAGTTTGCATAGATGGGCTCTTGAGGATATTAGAAGAATCCATGTTGCTGAGGAACAGGCTGTAGAGGAAGGAGGTGGAGTCGAAATGCATGTCCTCGAAGATGCAGGTCATTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACATGCTGATAACCCAGATGGGCTATTCAAGATCCTTTCATTTTCCTTCCAAGGATTTTAGGCCCAAGGAATTCTGGCATTGACCCTATGACCTGAATATAGGTTGTGAACCCCTTGCAACCTATAAGATTGCAGAAAGATCCAATTCTTTTTGTAGTATAGTGTATATCATCTCATTCATTATGATTTGCTCGTTCTAGAATGTGATGTGCAGAAATTAGTTTGGTGGGGCTGTTTCACCTTTAAAGCTGAGTACACGATACAGAATTGTGCAAAGAACTTATTTACAAGTTATGTCCTGATGGATCATTAAACACCAGCTTTACTGGGTAATGTAAGCTCATTTATCTTCTTCAAATGAATATGATTCTCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U321240" ref_strand="+" ref_description="SGN-U321240        Tomato 200607 #1 [6 ESTs aligned] arabidopsis/peptide: | Symbol: None | hydrolase, alpha/beta fold family protein, contains Pfam profile PF00561: hydrolase, alpha/beta fold family | chr4:6269787-6273237 REVERSE | Aliases: T5L19.160, T5L19_160(evalue: 2e-79, score=284) genbank/nr: gi|15234891|ref|NP_192741.1| hydrolase, alpha/beta fold family [Arabidopsis thaliana] gi|7487731|pir||T04007 hypothetical protein T5L19.160 - Arabidopsis thaliana gi|4539006|emb|CAB39627.1| putative protein [Arabidopsis thaliana] gi|7267699|emb|CAB78126.1| putative protein [Arabidopsis thaliana] gi|21594223|gb|AAM65982.1| unknown [Arabidopsis thaliana](evalue: 1e-77, score=284)">
      <seq>taggagggggaaaaagtctgcgtgttcgacagggaaaagggagctctccaccttctcctcggtctctccgtcgcattatctatttatcaagtttgtctttttcatatttctttttacctgtacaagttgattggaggaggaattttgggtggttttcttcaccgatctcttctccaagaaatgtcggctatttcgaatttcacggcgtgccggcgtttccaaaatggagctgcattaacaaaagactcacctggggttggtttgattactaacaagtttctggcgaccaagatttctacgccattccacaaggtgtctctcgtatgttcaaaaaggacgtttaaaggttcaaatataagaatgacaatgttagatgacaaactttccagcgggaaggttgttgtgccatctgaagtgctggcatatgagctcgttcaaggagcaaaagtaaaatggagttatattatggagggatcgttgcctgaaccaccgactgctgttctcttgcatggtattcttggcagcaggaaaaactggggaagctttgctaggagattggcccaagaatttccgaaatggcagtttctcctggtggacttgcggtgccatggtgattcagcatccctcaagaagagaggcacacatacagtcgcgtcagctgctcttgatgtcctaaagctgcttggccagctcagactgactccccgagttgtagttggtcacagctttggaggaaaagttgcattgagcatggttgagcaggttccaaagccccttgcacggcctgttagagtctgggttctagatgccactccaggagaggttcgagctggtgcagatggagatgatcatccagctgaattgatatcatttctgagtaattaccaaaagaggaaggtctcttcaaaacgagatattgtggatgctctgatacaagaagtttttccagggatgtagcacagtgggtggtaactaaccttcgtcaaccaacactgctggttcatctccttcacctttgtcatgggtgtttgatctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0106K23.1" temp_strand="-" temp_description="C06HBa0106K23.1  AC211043.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0106K23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="76721" stop="63920"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76421" g_stop="76110" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="312" r_length="312" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76109" i_stop="75059" i_length="1051">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.807" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75058" g_stop="74951" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="420" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74950" i_stop="73933" i_length="1018">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73932" g_stop="73906" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="447" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="73905" i_stop="71926" i_length="1980">
            <donor d_prob="0.995" d_score="0.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="71925" g_stop="71835" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="538" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="71834" i_stop="70671" i_length="1164">
            <donor d_prob="0.582" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="70670" g_stop="70627" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="582" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="70626" i_stop="69328" i_length="1299">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="69327" g_stop="69229" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="583" r_stop="681" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="69228" i_stop="67734" i_length="1495">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="67733" g_stop="67676" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="682" r_stop="739" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="67675" i_stop="67585" i_length="91">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="67584" g_stop="67532" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="740" r_stop="792" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="67531" i_stop="67047" i_length="485">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="67046" g_stop="66945" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="793" r_stop="893" r_length="101" r_score="0.990"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="66944" i_stop="66122" i_length="823">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.882" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="66121" g_stop="66052" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="894" r_stop="962" r_length="69" r_score="0.986"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="66051" i_stop="64295" i_length="1757">
            <donor d_prob="0.983" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="64294" g_stop="64220" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="963" r_stop="1036" r_length="74" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0106K23.1" gen_strand="-" ref_id="SGN-U321240" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1039</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0106K23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U321240" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76421" e_stop="76110"/>
          <exon e_start="75058" e_stop="74951"/>
          <exon e_start="73932" e_stop="73906"/>
          <exon e_start="71925" e_stop="71835"/>
          <exon e_start="70670" e_stop="70627"/>
          <exon e_start="69327" e_stop="69229"/>
          <exon e_start="67733" e_stop="67676"/>
          <exon e_start="67584" e_stop="67532"/>
          <exon e_start="67046" e_stop="66945"/>
          <exon e_start="66121" e_stop="66052"/>
          <exon e_start="64294" e_stop="64220"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGAGGGGGAAAAAGTCTGCGTGTTCGACAGGGAAAAGGGAGCTCTCCACCTTCTCCTCGGTCTCTCCGTCGCATTATCTATTTATCAAGTTTGTCTTTTTCATATTTCTTTTTACCTGTACAAGTTGATTGGAGGAGGAATTTTGGGTGGTTTTCTTCACCGATCTCTTCTCCAAGAAATGTCGGCTATTTCGAATTTCACGGCGTGCCGGCGTTTCCAAAATGGAGCTGCATTAACAAAAGACTCACCTGGGGTTGGTTTGATTACTAACAAGTTTCTGGCGACCAAGATTTCTACGCCATTCCACAAGGTAAGTAATTTGTTTTCCTGGTTTTCACCAAGTTTGGACTAATGGGTAACCGGTATATTAATGAAACCATTACTCCTTCGTTATAAACGATGTTAACATTAAAAAAGGTCCAATTTTTATGCTTTTTTGGTATCTTGCTTACGTGTTTTAGCTTTTATTAATGAACTGTGTCCCAAATCTAAACTAGTTGAGGTCTATATAAGCTAGTTGGTGTCTTTCTTTCCTTTTGTAGCATTATTAATGAACAATGTTGCAATTCTAAACTAGTTGAAGTCTATATATGTCTGCTCTATTGGGGCCTGTGGAAGATCATTCATAGTAGTTTGATTATATGTAGGCTGTCTGTTTATGTTTTTCCATAGGAATGCAAATGCTATGTGAATACCATGGACTTCTCCTGGTTTTAGTGTGATACCTTAGAATTTGGCGGCACGTTTCTTGATTAAGCTGCTGGTCCATTTCAGAGTTATTTTACTATTTGTGCTATTCTGTAGTTTTGTATGATGTTTTTAGAAGTGACTGGAATAGTCTCAGACTGTCAAATAATGACATGTTTATTCTATTTCTCGAGCACATGTGTGAATTCGGTGACTCTGGTTTCTTGCTCATATTTCTCGATCATCTGCGTGAGTGAAAAGCAGCTACCCACTCTAGTGGTGCTCTTCTTCTTCATAGCATAAAAGCTTTAAATGGAAATTTCTTTTACTTCCATATTAATGACTGAGGTCATTAAGTTCGATGGTTTCTATGCTCTAGTGATAATTTTCTCATCTTGTTTTTAGTTTTTTTTGTCACTCCCTCCATTTCAAACTAAGTGGTGTTTTTACCTTTTCATTTGTTTCAAAATAAGTAAAAATACATCTTACTTTCTAGTAACGAGTAGTTTTCTTAAGGGGCGTGCCCAAGCTAAAAACACCAATTATTTGAAATGGAGGGAGTAATAATTTAGAATTTTACGCGGTAAATTAAATTTTATAAGTGATCCGATTTAAAATAATGAATGGCTTTGCATATTCTAAAGGGCTGTTGTGGTTCACTTTGCTCTGCTCAGGTGTCTCTCGTATGTTCAAAAAGGACGTTTAAAGGTTCAAATATAAGAATGACAATGTTAGATGACAAACTTTCCAGCGGGAAGGTTGTTGTGCCATCTGAAGTGCTGGTAGTGGATCTGTGCTATATCTCTTATTATCAAGTACTTATTTTGGAAAATTTGGAGTTGACTTCTCTTATACTTTTGGTAAAATTGTTGGTTCATTAATTTGTGACACTTACATCAGCACTTCTTCCTATCTCTAGAAGGATTGTACACAAAAATTTGATTCCATAATGGTGCTAAATTTAGTAAACATCATCAAACTTTTTTCTATTTGAATACAACTTTTGAAAAAGTTAGTTGACATGATAAAAGAACCTTCAGAAGGTACTTGAATATTAGAGAAAGTTTATCTTGGGAACTGAAGAAAGGAAGAGATAGGAAGGAAACGAGAGTGAATTTTCTCTTCTCTTGTTTGGTTGGTAGAGAAAGATTTGAGGATCATGGAGTACGGAAAGATCTTTTCCAAATTGGTGGCACGAAGCTGTGTTCTCTGTTTCTTCCTAACAATAGAAAGGAAGTGACGGCTTTTTCTCTAAATTTTTCTATCGTATTTTCTCTTCCCTTTCTCTGTTCCAAGCAAACAGTTAAGAAATGATATTATTTTTTACTTTCAATCTACACTCTTGTTTTTCAGATGAAACAAAAATGATTACACTGTTTTAAGTTTTAATACTTCTATACAAAAGTTATTTACGTTAGTTCAATGGATATCTAAAATCTAGAGGAAGGTAAATTATCAAAAAGTTTAAAAGTAAAAGTTTTCAGATGAAACAAAAATGATTACACTGTTTTAAGTTTTAATACTTCTATACAAAAGTTATTTACGTTAGTTCAATGGATATCTAAAATCTAGAGGAAGGTAAATTATCAAAAAGTTTAAAAGTAAAAGTTAAGGAAAATATATATCTGTTTTCACTTTCAATAAAAAAGGGAGGTATATCTGTTTTTTTCTCAAATTACGTAGTATTAAAGTAGTAATTGTTATTCGCTATAAATGTAGCAATTGAAGAGTGTGACTACCAAAGTTGTTTGATGTGCAACTGAATCAATCTACTACTGATGAGATTATTTTTCTATGCAGGCATATGAGCTCGTTCAAGGAGCAAAAGTAAGTCTCTTTTTTGAGTTGAAATGTAACTAATTTATGTTTGCTATGCTTTTTCTTTTTCCTTTCCCTCCTCTTTATTTTTTTTCACATTTGTATTTATTTTGAAGTATGCATGTGGGATATATCTGTTCGGAAAGTATTTTACAGCTGAACAGTAACCTAAGTATTTGAGTTGGTATGAAGTGTATAGATGGTGATATTCTGACTGTTCTGGGCCACGTCAAATTATAGTAGAAAAATCTGAAAAGTATTGCTTTAATCTAGTGGATACGGAGTGCAGTCTAGTCCTAGACCTATTTTTCTTTTTAGATTTTTGTTTTGTTTTTCCTTTTCTTTTTCTTGTCCAATACGGACTATACAGTGAATCAGATCTCCGGTCAGAAAAAGAAGCATATCTTTTCATGAAAAACTCTTGCTCGAGTGCTGCTACCTCTGGTTGGTGGAACATATATATAAAATTAGACACTTAGCTATTGCGTGTCATACACTTTTTGGTTACTGCTTTGTTAGTGAAAGGACACCTTAAATGGGTATTGTTTCGTGTCACAATATAACTGTTTGAGTTCATCTGAGAAGCAACTATGTGGTATATGATTTTAGTTGTATGATTTTAATCTAATGAAAGCCAACCACTATATACATATTTCAATCAATCAATAACCTTAATTACAATCTAATTGAGGTCGACTTTGTGAGTCATCTTTATACGTCCCTTACTATTCTAGGACATTTGGATTTTCATTCCAAAGTATTGGTAAATATTTGTCTGTCTCACAGCACTGACCCTCATATGGGACAATAAGGCTCTTTTTTTTTCCATCTGTAATATTCGGGCACATCTTATTCCATGATGTTAGTTATAGATTGTCTCCTAGGGCTAGTTAAGAGGTTTCCTAGATCCATTCTTATCTCTAATATGCGAGTTATTGCATAGGAGCGGGGTTTTTACCCTGTGTGCACCCAAAGGTAGCGGCTGCGGGTTTCCCTTGTCATAAGAATAATTAAAAAAACTCTCATCTCTACGCGGACTCCCATGTCAGAATAATTCTAAGATACTTGTACAAAGAGTGGACTAATTTGGTGTGTCAGCAACAACAAAGGCAACAACTAGGGTTTTATCTCAACTGGTATCACCTGTATGGATTTTTTTTACAATTGTCTTCTCCTCTTAGCGAAGTTCGCATCAATATGCATATTTCAAATTTTAAAGTTTTTGGTGATGGGTACACAGGAAAATGGGTTACTTTTATCATTTTGGTTGTGTTGTTTTCATTGTTGTTGTCATTGTAGCTCTTATTATGCTGCCATTGTCATTATTGTTTATTATTCCTAAAGTTGTTAATTCATCCCTGTCAAGCAATTTTCAAGTATAAACTTGAAATAAAAGAAGCCCCAAGGGCCTTGGTTCTAAGGCAAAGGTTGTACAAGAAGGGATGTGTGATAGGTAATAGCATAAAATTGAATCCTGTCCAGTGAACTAAGTATGGTGTTTAAGTAGATAGGATCCCATTATCCAATGGGTAATGTAGATGATAATATCAGAGTTAAGAAGATAAATTTATAAATAAACATACCAAATAGTTCAATGAATAACATATATTCCCCTGAGACATGACAATGGACCTCTCATTCAATTTTTAATCATCCTCCTCTTCTTTCTTGATATAACTTTGGGGAGACATCCCCTTTTTGCTGGATATCATCATAATTATCAAATTTATGACTTCAAAAAATGTTTTTGTAGTCTTAAGGAACTAAGATTCATTATTCCAACAGATAAAGTTGTTCAAAACTCTAGCTTTTTTCCATTTTCATAAGTTCTGTACATTCAATCATTTTTCAGTCCACAATCTATTTACTTCACTTATTCATTGATATGCTAAATAAACTAGTAGAATTGGTAATTTCTCTAGCCCATTAAACGTTTTTTCTGCTGTTTAACACGTATATGCCTTTGATAATTGGAACTTGGATGTATAGGTAAAATGGAGTTATATTATGGAGGGATCGTTGCCTGAACCACCGACTGCTGTTCTCTTGCATGGTATTCTTGGCAGCAGGAAAAACTGGGGTAATGACTCATTTAAAGATTTGTAACATTTCGGCACAACACACAAATGTCTTGTGTATTCACTGAATTCTCATGATTCTTTTAAAGTGCCTTGTTTTTCAAATTTCTTATCCTTGTATCTCTGAGCATATATTAACATTGCACATGCAGTGCTCGGTCAAGTCTTCTTATGTAACTAGCAGTTGGAATTTTGCTTGAAACGAGAACAGTTCCAACACCAGAATGTCTAAATGAAATTGTTATCATTTCCAAAACAGAGAGGAGTTGTAGAAACTTGAAAACTAATTCATGTACCATCTAATTCCCTCAATTTTCCAAATGGCACGGAATAATTCTTTCCTTACCCATTGCTTACCTCTTTATGAAATTAATAACCCATTCCATATTTCCATCTGCACAGAGTAATGTTCTATGTCCTTAGATTTCCATCTGCACTGAGTAATGTTCTATGTCCTTAGTTTTCTATCTTGATGCTCTAAATTGCACAATTGTTACACCTAGTAGCAGCTGATGCTGGTTGAGTTCAATTTGTTTCAGTTTTATTGGTGATTGCTGATTAGGACCATCTTAGCTATACTTCAGAAACTCTTTCTTGGATAGGAAAAACTTGCTTTCGTTTAGCAGAAAAGTTAAGGGAGTGTTGTGACAGAGATACTGGAAAGGAGATTCCATATTTTTTTTCTTTTCACCCGACCATGAACCAAGTTTCATGATGCATCATGCTTATTGCTCTCTGTGAATTCTCCTTTTATCTTCAAGTACAATGGGTTTACTCAAATTCTGTTTCCCCCTTTTTGTTTTGATATCTAACTGTGTTGCAAGTTCTTCTGCAATGTACTTCAGAATCCTGATAAAGAACCTGTAGTTTGAGCCTTGAGGAAGTTCATATTACAATAAAATGTAAAACTATTTGCTTAACGAAAAGACTGATTTAAAAGTGTCTCTATTGCTGGAGTGCAAGGGAAATTTTACATCTTGTGGCATAGAGGTTCTTATTTCCATAGAGAATTACTAGTTAATTGCCGACTTACTATTGCTTTAGATAGTTTTCTTTTGATTTCTATTATTTTTATTTTTCTTATTCCTCCAATCTGCTCAACCAATTTTTTCGTTCTTCAAGTTTCTTCTCGTCAACCTTTTTTCATGACAATCTCAAATTTTCAGGAAGCTTTGCTAGGAGATTGGCCCAAGAATTTCCGAAATGGCAGGTAGTAGAGATAAGCACTACTTCTTATCCCTTCTTATATACGCAATATCTTAAAGAGTTCTACATTATGTTTACCTTGTCTCAATTGGACAGGGAGTGTGTTTTGTTGCATGTTGTTTACTGTTGGCCAATTCAACCCCCTTTTCTTCTATATTTTATCTGTGAAGAATGAAGAGAAAGGAAGATTTGATCTGGCATTACTACCCTTGAGAGATAGTCTATTCTTATATTCGTAAAGCTTGGAGACATTGAAAAGCCCAAGAAGATTCTTTTCACATAACCATAGATTAGGCAATTCCCAGGCTGCTCAATTAGTGGTCACTGAAAGGGAAGGAGGTCTCAGGTTCAAATCCCAATGAAGGCAAAAAACACTTGGTGGTTTGTTTCCATCAGTCTAAACCATGGTTGTCAGGGTTACCCGTATCTGCGCTAGTAGAGATAGCAAGTACCTAGTGAATAGTTGAGGTGAGTGCACGCTGGCCCGTACACCACTGTCATTAGAAAAAAACATAATCATAGATTATATAAAAACAACACCTGAGTGTTTTTGTTGAACTTTTGGATAAGTGACATCCTCTTGTCTGTTCTTCAATTCTTTCCTGTATACTGTATTGAGCTGCTTACATTTTATCACTAAAATGATACGTCCTAAAACAATTTCTTTTTGGTTGTTGGAAGACAAATATAGGAACAAATTCAATTTCAAACTTCATTGAAGTCATTAATTAACATCCTATAGAAACTCTTTTGGGAACAATAAGTTTGGAGCGCAATGATGTTGGGGCAACTTTTGTTGTAGGGGTGCTGTATCATATGTGGCTACGCGTCAAGTCCTTACCTGAAAACAGTGCTCTATTTTTATCGATTTATTTGATCAAAAAGGTAATATTAAAACATATAGTGAAGCTTTAGAAAATAAAACAAAAACATATGAAGCTCCCAATTTTTTGGGGTTCTGATGTGCTTTATTACCCTCCTGAGAGAGGCAACTAGAAACAGATTGTGATGTATTGAACTGTTCTATTTGAGCTTGTTTGAGTTTTCCTGAATATTTTTCATTAACTCTTGGAAGATACTATTAATTGCGGTCTCATATTCTTGAACCAATATTTTCTCCTCTTTGTGGGGATGTCATCTTGAATTCATTTGCTTTTGATGCCTTTCGCCAGTTGTTGTCCTCAAAAATCACGTTCTTCTTCAACTGATTGTTGATATTTTATGATTGACTTGTTTTGATATGATATTTGGGTGATACTGATATTGTTGCGGACAGTCTTACAGTAGATTTACTTTTCTGCAGTTTCTCCTGGTGGACTTGCGGTGCCATGGTGATTCAGCATCCCTCAAGAAGAGAGGCACACATACAGTCGCGTCAGCTGCTCTTGATGTCCTAAAGCTGGTATAGTTTCTTGACCATGACCTGTTGCCTTATGCAAGTACTGTATTTTCTTGAGTGCCATTTTATATGGCATCCGTATCACTAAGCTTTTTGTGGGGCAGGCATGGAAAATTTTGACAGACATTATCAGTCAGTCCTTGACTGTGCTTCTATTTGTTTCGTTGAAGTTTAGAAGAGCATGACCAGTTGCATTATTCTCAAATGTATATTTTTCTTTGAATATTGATAAACATATTATCTTTCTGCAAGTAGATATGGGTCTTGCATGCACACTTGTGGATGTTTACATGTTTCATGTGGAAACATTAGCTATGGTCATGTCATCCTAGAAGCCCCCATGATTGATGTTGTTCCTTCCGTTATTGTTGAACTTTTTTGCCCTCATAGTTGACTTGCAATTCTAATTCTTTCAGTTAGATATCCATTTCCTATTTCATCCCTTTTTTTGTGGGATCAGTTCTCTACTTAGTCAAGTAGACAACATTCATTATTATTGGGTTCTCCCATTACATTCCCAACTGCTTTCAAATTTTCAAAGAGGGGACTAGCTTCATCTTCAAACCCATGAAAGTGAAGCTTTCTTCATCCATCTAAAGGCATCACATCTACTGGTGGTTTTACAATGACTTGCATGGCTTTTCGTCGTCACAACAATGGGTAATGAAGTGTCAACCTTAGTGTTGACTGAATGAATCTTTGTTGATCATCGAATGATGTTCTGATTCCCATGAATTTTCACTACATGCTTTGTTTGGACTGAATCACAAGATTTCTGAGTGTTAGTAATCTCTGTTCTCCCCTTGGCTTGATTGGTCAAGGCAGTTGACCTGTGCAACCTAGGTGAGAGGCCAAGATATGTGCATCATGTGATTTTTCCACATCAGCTAGGTGTCACCATCTCTTTTTGATAAGGTAAATAATTTTATCAATATTGGGAAATCCCTGCATACAAGATGTAGAGAAACCTACTCTAAAATATGATTCTCTACGAAGTCACCCACTCAACTAAACAAACAAGAACCTATTTGTGCAACAAAAGAAACTAGAGACAAGAAGCTACTCTTCACATGTACAAAATCACCCCAACCCCTTCGAAAGCTCTCCTATCCCTCTCCCTCCGCACAACCCATATACGTCTCTGATAAGTGTCCTGGCCAACTATCTTATGGCCTATTTGTTAATTTGCTCTAAGATGCTGCATTTTATGCAGGATTATTTTTTTGACGTGACAAGGCTAGTTTAATTTGAATCAAATATGGGTCCCGCAGACCTGTCCAAGATGTCCACTCTATGTACTCGACACATGTGGTCCTTCCCTCTGTGTTTGTGTTACATTGTCAGTGACTTACATTGTTGTCTCTTATGATTCTCTTGTTTTTCTGATTTTGTGTTGGGTCAAATGGTTCCCCATTTTGCCTCTTCACTTCTTGCCTGAGATGTTAACACTATTACGGTAACACATTGCTTGGGCTCAATCTTTATTTCTTCTGTCTAGCTTGGCCAGCTCAGACTGACTCCCCGAGTTGTAGTTGGTCACAGCTTTGGAGGAAAAGGTAACTTTTAGCTTATTACAGTGAAAAGCTACTTGGTGAATTCAATTGATATTTTGTTGTTTAGACATTGATCTTCCTTATTACTATGCAGTTGCATTGAGCATGGTTGAGCAGGTTCCAAAGCCCCTTGCACGGCCTGTTAGAGTAAGTATTCTGTATGAAGACTGTAAAAGCATGCTTGCAGTAATATCAAACACAGTTTTGGATATAGATTGGAACTTGTGAGTGGTTAAAGCAATGTTAAGAACTCAGTTAAGGCAGTATATACCATTTGCTTCACAATTCTCTCATTTTGAATGGGTGATATCGGTAATTGATCTTTACGCATAAGTATCCCGTAATAAAATTCTACAAGCATACTTGAGATAATATCAAATACTGTTTCAATATAGCTTAAACTTGTGAAAACTTAAAAGTAATGTTAAAAGCTCAGTTAAGGCTATATACCATTTGCCTTCCAGTTTTCTCGTTTACATATGATGATTTTGGTAATTGGCTTTCAGGGATGATAATTTTCTTTTCTATTGCACTTTCTTTTGTCTTGCAATCTATTTTTCCATCATGTGTTTTTTTTTCTTTTTCTTTCCACTCCAAATTCTTAGAAGTAATTCAAACTAATTGGGTCATAGGTCTGGGTTCTAGATGCCACTCCAGGAGAGGTTCGAGCTGGTGCAGATGGAGATGATCATCCAGCTGAATTGATATCATTTCTGAGTAAATTACCAAAAGAGGTAAGTCCTTCTGGTGATTTCACTTTGTATGAAAATGTCTCCATGTATGTTGCTTTACATGAACCTTAACAAACTTTATTCTCTCTACTTGTTAACTCTCCATGATATCTTTAGTGTGTCAATATAGATACGTGTTCATTTTAGGATTTTTGAGAAGAAATTGGGATGGGAGGTACAGTGGGCCTATTAGTGTGTTCATTCTCTGATGTGTATAGTTTAAAAGAGCAAAATAGGATTGCATTCTGAAGATAGAAATTTCTTGTTAAGTGTGTCATGTTTTTTTTTGTACCTCGCTTGTATAAATATTTGATCAAAATTGTGGATGGCTGCTCCTACATATAGAGTTGAGATTTGCTTAGTTATTGTAAACAATAGCTATCTCCCTCTTTGATAATAAATGTTTCACCTGTCCAAAAAGAATTCGCAAGAACTACTTTAGGTTTAAGGTATGATTGATATTTAATGTAATATGCTTACAATGACAAAGTAGTTTTTGGTGGCAAAAGCGTGTCCATTAGTTTGGAAGTAGAAGCTGAATGTGTCGGAGCAATGGAGAACAAGCCTTTCTCCTTCATATTTTACCTTGCTTTTGACTAATTCTTCTGTTCTTGCATGTTGATATTGTTTGACACTACTCTTGGTTTATAACTTGAAATAGCTTACAGTGTTGTGTTGAAACTTTATTAGCCTAGGCTATACAATTCACTCACTCAACTGTTGGTTCTCCTTCTCATCTCTCTCTCGTTCTGTCTTTGTTTTTTTACTGATATATTCACATAATCTGTATTGACGTCAATTCTTTTTATGAATAATATTTTTCAAGGAAGGTCTCTTCAAAACGAGATATTGTGGATGCTCTGATACAAGAAGGTTTTTCCAGGGATGTAGCACAGGTATCCCCTGGCCTCACATATTTTTCTTTCTAGGAATTCTGAAAGGTTAAACACTTAAACTTCAACTTTGCAAAACTTAAATTGCTGTATAAACGAAGACATTTTTCTGCATCTAGTGAGGCACTGAGCTTGATATTGAGTAACTGAGGAATGAGATCTCTGAAGTTCGTTAGAAACATTATCAATGTACTTCTTTAAGTTGTTGTAATTTTTTCCACTCTTCACAGTGCATGGAGAGTGAGCCAGTATATATCTCTTGACTACTACTGTGAAAGAAAAAGAGAATGATGATTTAGTAGGCCTACCAAGGATAAGTTGTCCAAAACAAAAACGGAAAAGAACCGTACCACAATAGTGACACTCCCCAGTCTCTCTTAGCATCTTGTAATGGACCTATAGCCTTAGTATGAAAGGCAGGAGAATACCCTATCTCGAATGCCTCTGACATGTCTACCTGGGTCCTGGAAAGATACATGTGATATGCCCACCGGAAACAATTGCCAACTTTGGGGAGAAACTTCTAATTTTACAATATCTTAAGCCCCTTAGTCAACTCTAACCAATATAAGTCCTTTATAGTAGCAATCAATCTCTTCCACCTTTCCTTTCTAAAGAGAGCTTATAGAAAAACATTGGGAGTCTTGTTTTTCCATATGATTTATTGGAAATGATGTTCTTGAATTTTGTTGGTTAGAATAGGAGACGATGTTTCACTCTACACCATTCAAAATTTAAACCGTCATTGCTGAAGCTGGATTCAGAAGTTAGAGCGCACGGGTTCAGAATTCTTGTGCTCCTATTATTCCTCTAATGCAGCTAGTTTGATTCTTTTTTTAATAATACACATAGGGGTCGTTTTGTATGCTGAACAAGCATAGATAGTAAAAGAATAAAAAATTAATACTGCCTTATCCCTTGTTTGGTTACTAATCCTAAGATAAGTTATACTATAATTAGTAATTATACTGAGATAAGTTAGCCGGTGGGCGGAATAATAGTACCGGGAATAGTTATCCCTCGATAAAACAATGAAAATGACAAAATACTCCTGAGGTCCCTACAACCCTTTTTCTGTATAACGTGGTGGGTATTTTTGTAAACAAACAATTTTTCTTATAAAGTATGCAATGTATGTTATTTTTAATATAACAAACTAAACAGTCAATAAGAAATAGTACCAAGATAATTGATCACATCATCACTAATCCCAACATAACTTGTCTACGAACCAAATGACCCATAGTCTCTATTCCTTTCACTTAACATATAAGGCCAGAGCAAGGCATAGCGGATTTCACCAAACTTACTGCGTCTACACTAGATATGCCTGTCTTCACTGCTCAAAGTGGATGACCTCATCACGCATGCATTTAACACTATTTCTTTGGTGCAAGAAAAGGTTTGAATAGAATAGGGGAATTCAGTCGAGGGAAATGCAATTAACACTAGTGCACAGTCCAAAACTTAGTGGATGCCTGACCCTCTATCCTGTCTCCACTTAAATATCAAACTTTTGTCCGTGGCCGCGTTCAAAATTGCACAAGTAGCATGTAATTGTTTGTAAAATAGATTTAGTAAAGGAGTATATCATGCAGTATGTCTGACTAAAAGTTCATCTATAAAGGCCATCATTCCATCAAACATTGTTCATTACCATATTTCTAACTGTTGATTTGCTTGCACATGAGACATGAGTTGGCCCAGTTCTCATTTTTTTCCCAACTGATGTCTGACAGTTACCTTTGTAAATTTTGCAGTGGGTGGTAACTAACCTTCGTCAAACCAACACTGCTGGTTCATCTCCTTCACCTTTGTCATGGGTGTTTGATCTC</genome_strand>
        <mrna_strand>TAGGAGGGGGAAAAAGTCTGCGTGTTCGACAGGGAAAAGGGAGCTCTCCACCTTCTCCTCGGTCTCTCCGTCGCATTATCTATTTATCAAGTTTGTCTTTTTCATATTTCTTTTTACCTGTACAAGTTGATTGGAGGAGGAATTTTGGGTGGTTTTCTTCACCGATCTCTTCTCCAAGAAATGTCGGCTATTTCGAATTTCACGGCGTGCCGGCGTTTCCAAAATGGAGCTGCATTAACAAAAGACTCACCTGGGGTTGGTTTGATTACTAACAAGTTTCTGGCGACCAAGATTTCTACGCCATTCCACAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCTCTCGTATGTTCAAAAAGGACGTTTAAAGGTTCAAATATAAGAATGACAATGTTAGATGACAAACTTTCCAGCGGGAAGGTTGTTGTGCCATCTGAAGTGCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATATGAGCTCGTTCAAGGAGCAAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAATGGAGTTATATTATGGAGGGATCGTTGCCTGAACCACCGACTGCTGTTCTCTTGCATGGTATTCTTGGCAGCAGGAAAAACTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCTTTGCTAGGAGATTGGCCCAAGAATTTCCGAAATGGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTCCTGGTGGACTTGCGGTGCCATGGTGATTCAGCATCCCTCAAGAAGAGAGGCACACATACAGTCGCGTCAGCTGCTCTTGATGTCCTAAAGCTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGCCAGCTCAGACTGACTCCCCGAGTTGTAGTTGGTCACAGCTTTGGAGGAAAAG...........................................................................................TTGCATTGAGCATGGTTGAGCAGGTTCCAAAGCCCCTTGCACGGCCTGTTAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGGGTTCTAGATGCCACTCCAGGAGAGGTTCGAGCTGGTGCAGATGGAGATGATCATCCAGCTGAATTGATATCATTTCTGAGT-AATTACCAAAAGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGTCTCTTCAAAACGAGATATTGTGGATGCTCTGATACAAGAA-GTTTTTCCAGGGATGTAGCACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTGGTAACTAACCTTCGTC-AACCAACACTGCTGGTTCATCTCCTTCACCTTTGTCATGGGTGTTTGATCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U343738" ref_strand="+" ref_description="SGN-U343738        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>gcacgagaaattacattcatatttataagtataagtgtataacttatatcatttggtcatttggtgtatttcccaggaggaatcttcttcaaatttcaagtttcgacatcaatattttaattttcattataatcgtttgttcttatacaaacgtttggtaacttcgttccactctctaatcttatatttattttttgtatttattatttaacttgtaagttgttcttgttaagtttcgtattttataatttataattttatatcatggagtcttctaaaaaaagtggaagtaaaaaaggtctagtagaatcagtaaaaaaattagttaaaaaaactaacaaaggtgctagttcgtctaaatctaaaattcctcttgttagaataaatacagatgaatttacgcatgtgaatgaaactagtttttcccgtcccggtcctataaatattaattcagatagtccgactccccatgaactctatgaaagatattatggtattaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0106K23.1" temp_strand="+" temp_description="C06HBa0106K23.1  AC211043.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0106K23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77428" stop="78513"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77750" g_stop="78213" g_length="464"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="501" r_length="464" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0106K23.1" gen_strand="+" ref_id="SGN-U343738" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="0.926" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0106K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U343738" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77750" e_stop="78213"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATAACTTATATCATTTGGTCATTTGGTGTATTTCGGAGGAGGAATCTTCTTCAAATTTCAAGTTTCGACATCAATATTTTAATTTTCATTATAATCGTTTGTTCTTATACAAACGTTTGGTAACTTCGTTCCACTCTCTAATCTTATATTTATTTTTTGTATTTATTATTTAACTTGTAAGTTGTTCTTGTTAAGTTTCGTATTTTATAATTTATAATTTTATATCATGGAGTGTTCTAAAAAAAGTGGAAGTAAAAAAGGTCTAGTAGAATCAGTAAAAAAATTAGTTAAAAAAACTAACAAAGGTGTTAGTTCGTCTAAATCTAAAATTCCTCTTGTTAGAATAAATACAGATGAATTTACGCATGTGAATGAAACTAGTTTTTCCCGTCCCGGTCCTATAAATATTAATTCAGATAGTCCGACTCCCCATGAACTCTATGAAAGATATTATGGTATTAAT</genome_strand>
        <mrna_strand>TATAACTTATATCATTTGGTCATTTGGTGTATTTCCCAGGAGGAATCTTCTTCAAATTTCAAGTTTCGACATCAATATTTTAATTTTCATTATAATCGTTTGTTCTTATACAAACGTTTGGTAACTTCGTTCCACTCTCTAATCTTATATTTATTTTTTGTATTTATTATTTAACTTGTAAGTTGTTCTTGTTAAGTTTCGTATTTTATAATTTATAATTTTATATCATGGAGTCTTCTAAAAAAAGTGGAAGTAAAAAAGGTCTAGTAGAATCAGTAAAAAAATTAGTTAAAAAAACTAACAAAGGTGCTAGTTCGTCTAAATCTAAAATTCCTCTTGTTAGAATAAATACAGATGAATTTACGCATGTGAATGAAACTAGTTTTTCCCGTCCCGGTCCTATAAATATTAATTCAGATAGTCCGACTCCCCATGAACTCTATGAAAGATATTATGGTATTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U312551" ref_strand="+" ref_description="SGN-U312551        Tomato 200607 #1 [77 ESTs aligned] arabidopsis/peptide: | Symbol: None | 60S ribosomal protein L15 (RPL15A) | chr4:9399987-9401404 REVERSE | Aliases: DL4385C, FCAALL.416(evalue: 2e-91, score=332) genbank/nr: ribosomal(evalue: 9e-97, score=356)">
      <seq>acgaggcacagaggtagaagaacagcagacgcaatgggtgcttacacttatgtgtcggagctatggaggaagaagcagtcggatgttatgaggttcttgcaaagggtgaggtgctgggagtaccgtcaactcccttctatcgtccgtgtcaccaggcctacacgtcctgacaaggcacgccgcttgggatacaaggccaagcagggttatgtggtctatcgtgttcgtgtgaaacgtggtggaaggaagaggcctgtttcaaagggtattgtgtatggtaagcccaccaaccagggagtcacacaattgaagttccagcgcagcaagcgatctgttgctgaggagcgtgctggaaggaagttgggtggtcttagagtcctgaactcctactggattaatgaggattctacctacaagtactttgaggtaatattggttgaccaggctcatgctgctatccgcaatgatccaaggatcaactggatctgcaacccagtgcataagcacagagaattgcgtggtcttacttcagctggtaagaaatacagaggactccgaggaagaggacatctccaccacaaggctcgcccctcaagaagggcaacctggaaaaggaaccagactctgtctctccgtcgttaccgttgatctgcttgacctttttgagaggagtgtcgcttgcttaattttttgcattatctggttttagcccttttatcttgaaacattcagctgtttacaattttgaacaactagttttgtatttgaagtatccatgttcttgctgaacgagtctcttgaacttaaaacaatagtttctagtaaaattttgtgttgaaagtataaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0106K23.1" temp_strand="+" temp_description="C06HBa0106K23.1  AC211043.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0106K23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="82117" stop="85057"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82409" g_stop="82447" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="37" r_length="37" r_score="0.872"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82448" i_stop="83062" i_length="615">
            <donor d_prob="0.996" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83063" g_stop="83229" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="204" r_length="167" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83230" i_stop="83722" i_length="493">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83723" g_stop="83920" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="402" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="83921" i_stop="84312" i_length="392">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="84313" g_stop="84756" g_length="444"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="846" r_length="444" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="847" polyA_stop="891"/>
      <MATCH_line gen_id="C06HBa0106K23.1" gen_strand="+" ref_id="SGN-U312551" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>848</cumulative_length_of_scored_exons>
        <coverage percentage="0.952" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0106K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U312551" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82409" e_stop="82447"/>
          <exon e_start="83063" e_stop="83229"/>
          <exon e_start="83723" e_stop="83920"/>
          <exon e_start="84313" e_stop="84756"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGAACACCACAGAGGTAGAAGAACAGCAGACGCAATGGGTACGTTCGTCTATCAAATCTCTCTCTGTATTGTACTCTTTGCTGTGTTCATTCATGTCGAAAATTTAGTTGAAAATGAACAATCTATAGGTTTTGTGTAAGGTCTTTTTGTGATTAGGAACAGGTTCCTACTTCTAATCATCTCTTTAGGTTAGATAATCGGACATTTTGTTGTAATGCTTCTGTTAAATTATTAAATTTTCATTAGAATTTGTTGCACTGAACAAACGTAGATCTAGTAATTGAATCAGATATACACACAATGTCTGCTATAATCTGGCTATGGTGGGAGGACTAGCTTTGGACGTGGTTGTTTATGTATAGGGTGATTGATAACTCTTCGTAAGAAAATGATATCTTATTCTAATAGGCTATGCGTGGTGTTTCAATTATAGAGTTCGATTTTACGGAATATGCTGCATTTTCCGCTACATAGTTGCCCTCTGATTAAGATTAAATGGTAATTTTATCCCAAATGCACGCATGAGATGAAAATGTGGCTATTTTATCCTAAAAGCTGGATAGGGTAAAGTAAAAATGAGTCTTGAAGTGGTATTTATGGATATTGGTGTTGCTAGAATAGTGGCTTGTTTTTGACGTTTGGTGGAAATGCAGGTGCTTACACTTATGTGTCGGAGCTATGGAGGAAGAAGCAGTCGGATGTTATGAGGTTCTTGCAAAGGGTGAGGTGCTGGGAGTACCGTCAACTCCCTTCTATCGTCCGTGTCACCAGGCCTACACGTCCTGACAAGGCACGCCGCTTGGGATACAAGGCCAAGCAGGTATATTTCTGTTGTATCTAGTAATATACTCCATATCTACTTAATGATAGGATTACAGACATTTTATCTTTTTTTCCAAGATTTGTTCAGTAAATGAGTTGTGAGTTTGGATATCTAGTGGAAATTAAGTTTGATTCATGCTCTTTAGTTTTTTATATTTTGTGTACATTAGTTGCCTATTCGGTTGTGTCTTCTGATATTTGTCTCACTGTTGGGTCTGATACTATTTCTGGGTTATGTTGGTGACATACGTCTGTGATTGCTGAGCTTCTTGTGAAGGCTGTATGAATTTTTGTTCATTGTTGGTTTATTTCTGTACAGTTTTGAGATACAAAGGATAGAAATGCATATGCATACTCCTCTGTTTCTTGTTCCCTTTTGAGGAACAGTATTAATGAAGAAATATTTTCTTTATCATGTTAAATGTAAAATGCTGCCTTTTCCCATAGTATGGACTACATCAGGATTTTTATTAAGATCATTATTTTTGCAGGGTTATGTGGTCTATCGTGTTCGTGTGAAACGTGGTGGAAGGAAGAGGCCTGTTTCAAAGGGTATTGTGTATGGTAAGCCCACCAACCAGGGAGTCACACAATTGAAGTTCCAGCGCAGCAAGCGATCTGTTGCTGAGGAGCGTGCTGGAAGGAAGTTGGGTGGTCTTAGAGTCCTGAACTCCTACTGGATTAATGAGGTATCTGTTTTAACCTTTTTACCTATTTCTCGTACATTGTAGTGCATTTTTTTTATGTGCTCACATGCTAGAGTGCAAAGTTAACTGCATTTGTAATTGAGACAAAGAAACGTGTTTTTTTTTATTTTTATAATGAACAAATTCAACCACCTTGCAAGCGCTATATTATGATTTATCTTATTAGCTCCACAAATGTAGAAGTCTGTGCTTCAAAAATATACTCCTAATAATATGGCTTGCAGGTTGGTTGAATTACTTTTCTGAGTATGCGAACACCACTTCACAAATGGTTCTGTTTTGCTGACTGAAATTTGCGATTTTTTCATGTCGCGGACTTTGTTTACACATGCTTAATGATGATAATACGTTAACCTTAACCTTATCCAATGCAGGATTCTACCTACAAGTACTTTGAGGTAATATTGGTTGACCAGGCTCATGCTGCTATCCGCAATGATCCAAGGATCAACTGGATCTGCAACCCAGTGCATAAGCACAGAGAATTGCGTGGTCTTACTTCAGCTGGTAAGAAATACAGAGGACTCCGAGGAAGAGGACATCTCCACCACAAGGCTCGCCCCTCAAGAAGGGCAACCTGGAAAAGGAACCAGACTCTGTCTCTCCGTCGTTACCGTTGATCTGCTTGACCTTTTTGAGAGGAGTGTCGCTTGCTTAATTTTTTGCATTATCTGGTTTTAGCCCTTTTATCTTGAAACATTCAGCTGTTTACAATTTTGAACAACTAGTTTTGTATTTGAAGTATCCATGTTCTTGCTGAACGAGTCTCTTGAACTTAAAACAATAGTTTCTAGTAAAATTTTGTGTTGAAAGTATAC</genome_strand>
        <mrna_strand>ACG-A-GGCACAGAGGTAGAAGAACAGCAGACGCAATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTTACACTTATGTGTCGGAGCTATGGAGGAAGAAGCAGTCGGATGTTATGAGGTTCTTGCAAAGGGTGAGGTGCTGGGAGTACCGTCAACTCCCTTCTATCGTCCGTGTCACCAGGCCTACACGTCCTGACAAGGCACGCCGCTTGGGATACAAGGCCAAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTATGTGGTCTATCGTGTTCGTGTGAAACGTGGTGGAAGGAAGAGGCCTGTTTCAAAGGGTATTGTGTATGGTAAGCCCACCAACCAGGGAGTCACACAATTGAAGTTCCAGCGCAGCAAGCGATCTGTTGCTGAGGAGCGTGCTGGAAGGAAGTTGGGTGGTCTTAGAGTCCTGAACTCCTACTGGATTAATGAG........................................................................................................................................................................................................................................................................................................................................................................................................GATTCTACCTACAAGTACTTTGAGGTAATATTGGTTGACCAGGCTCATGCTGCTATCCGCAATGATCCAAGGATCAACTGGATCTGCAACCCAGTGCATAAGCACAGAGAATTGCGTGGTCTTACTTCAGCTGGTAAGAAATACAGAGGACTCCGAGGAAGAGGACATCTCCACCACAAGGCTCGCCCCTCAAGAAGGGCAACCTGGAAAAGGAACCAGACTCTGTCTCTCCGTCGTTACCGTTGATCTGCTTGACCTTTTTGAGAGGAGTGTCGCTTGCTTAATTTTTTGCATTATCTGGTTTTAGCCCTTTTATCTTGAAACATTCAGCTGTTTACAATTTTGAACAACTAGTTTTGTATTTGAAGTATCCATGTTCTTGCTGAACGAGTCTCTTGAACTTAAAACAATAGTTTCTAGTAAAATTTTGTGTTGAAAGTATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U333659" ref_strand="+" ref_description="SGN-U333659        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | 60S ribosomal protein L15 (RPL15A) | chr4:9399987-9401404 REVERSE | Aliases: DL4385C, FCAALL.416(evalue: 2e-45, score=178) genbank/nr: ribosomal(evalue: 3e-47, score=191)">
      <seq>acagaggtagaagaacagcagacgcaatgggtgcttacacttatgtgtcggagctatggaggaagaagcagtcggatgttatgaggttcttgcaaagggtgaggtgctgggagtaccgtcaactcccttctatcgtccgtgtcaccaggcctacacgtcctgacaagagcaccnggnccnnccnagnnnccnnttttgggatacaaggccaagcagggttatgtggtctatcgtgttcgtgtgaaacgtggtggaaggaagaggcctgtttcaaagggtattgtgtatggtaagcccaccaaccagggagtcacacaattgaaattccagcgcaccaagcgatctgttgctgaggagcgtgctggaaggaagttgggtggtcttagagtcctgaactcctactggattaatgaggattctacctacaagtactttgaggtaatattggttgaccaggctcatgctgctatccgcaatgatccaaggatcaactggatctgcaacccagtgcataagcacagagaattgcgtggtcttacttcagctggtaagaaatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0106K23.1" temp_strand="+" temp_description="C06HBa0106K23.1  AC211043.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0106K23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="82118" stop="84756"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82418" g_stop="82447" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82448" i_stop="83062" i_length="615">
            <donor d_prob="0.996" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83063" g_stop="83225" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="193" r_length="163" r_score="0.877"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83226" i_stop="83550" i_length="325">
            <donor d_prob="0.475" d_score="0.59"/>
            <acceptor a_prob="0.949" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83551" g_stop="83573" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="216" r_length="23" r_score="0.696"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="83574" i_stop="83722" i_length="149">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="83723" g_stop="83920" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="414" r_length="198" r_score="0.990"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="83921" i_stop="84312" i_length="392">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="84313" g_stop="84456" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="558" r_length="144" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0106K23.1" gen_strand="+" ref_id="SGN-U333659" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0106K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U333659" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82418" e_stop="82447"/>
          <exon e_start="83063" e_stop="83225"/>
          <exon e_start="83551" e_stop="83573"/>
          <exon e_start="83723" e_stop="83920"/>
          <exon e_start="84313" e_stop="84456"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGAGGTAGAAGAACAGCAGACGCAATGGGTACGTTCGTCTATCAAATCTCTCTCTGTATTGTACTCTTTGCTGTGTTCATTCATGTCGAAAATTTAGTTGAAAATGAACAATCTATAGGTTTTGTGTAAGGTCTTTTTGTGATTAGGAACAGGTTCCTACTTCTAATCATCTCTTTAGGTTAGATAATCGGACATTTTGTTGTAATGCTTCTGTTAAATTATTAAATTTTCATTAGAATTTGTTGCACTGAACAAACGTAGATCTAGTAATTGAATCAGATATACACACAATGTCTGCTATAATCTGGCTATGGTGGGAGGACTAGCTTTGGACGTGGTTGTTTATGTATAGGGTGATTGATAACTCTTCGTAAGAAAATGATATCTTATTCTAATAGGCTATGCGTGGTGTTTCAATTATAGAGTTCGATTTTACGGAATATGCTGCATTTTCCGCTACATAGTTGCCCTCTGATTAAGATTAAATGGTAATTTTATCCCAAATGCACGCATGAGATGAAAATGTGGCTATTTTATCCTAAAAGCTGGATAGGGTAAAGTAAAAATGAGTCTTGAAGTGGTATTTATGGATATTGGTGTTGCTAGAATAGTGGCTTGTTTTTGACGTTTGGTGGAAATGCAGGTGCTTACACTTATGTGTCGGAGCTATGGAGGAAGAAGCAGTCGGATGTTATGAGGTTCTTGCAAAGGGTGAGGTGCTGGGAGTACCGTCAACTCCCTTCTATCGTCCGTGTCACCAGGCCTACACGTCCTGACAAG-GCACGCCGCTTGGGATACAAGGCCAAGCAGGTATATTTCTGTTGTATCTAGTAATATACTCCATATCTACTTAATGATAGGATTACAGACATTTTATCTTTTTTTCCAAGATTTGTTCAGTAAATGAGTTGTGAGTTTGGATATCTAGTGGAAATTAAGTTTGATTCATGCTCTTTAGTTTTTTATATTTTGTGTACATTAGTTGCCTATTCGGTTGTGTCTTCTGATATTTGTCTCACTGTTGGGTCTGATACTATTTCTGGGTTATGTTGGTGACATACGTCTGTGATTGCTGAGCTTCTTGTGAAGGCTGTATGAATTTTTGTTCATTGTTGGTTTATTTCTGTACAGTTTTGAGATACAAAGGATAGAAATGCATATGCATACTCCTCTGTTTCTTGTTCCCTTTTGAGGAACAGTATTAATGAAGAAATATTTTCTTTATCATGTTAAATGTAAAATGCTGCCTTTTCCCATAGTATGGACTACATCAGGATTTTTATTAAGATCATTATTTTTGCAGGGTTATGTGGTCTATCGTGTTCGTGTGAAACGTGGTGGAAGGAAGAGGCCTGTTTCAAAGGGTATTGTGTATGGTAAGCCCACCAACCAGGGAGTCACACAATTGAAGTTCCAGCGCAGCAAGCGATCTGTTGCTGAGGAGCGTGCTGGAAGGAAGTTGGGTGGTCTTAGAGTCCTGAACTCCTACTGGATTAATGAGGTATCTGTTTTAACCTTTTTACCTATTTCTCGTACATTGTAGTGCATTTTTTTTATGTGCTCACATGCTAGAGTGCAAAGTTAACTGCATTTGTAATTGAGACAAAGAAACGTGTTTTTTTTTATTTTTATAATGAACAAATTCAACCACCTTGCAAGCGCTATATTATGATTTATCTTATTAGCTCCACAAATGTAGAAGTCTGTGCTTCAAAAATATACTCCTAATAATATGGCTTGCAGGTTGGTTGAATTACTTTTCTGAGTATGCGAACACCACTTCACAAATGGTTCTGTTTTGCTGACTGAAATTTGCGATTTTTTCATGTCGCGGACTTTGTTTACACATGCTTAATGATGATAATACGTTAACCTTAACCTTATCCAATGCAGGATTCTACCTACAAGTACTTTGAGGTAATATTGGTTGACCAGGCTCATGCTGCTATCCGCAATGATCCAAGGATCAACTGGATCTGCAACCCAGTGCATAAGCACAGAGAATTGCGTGGTCTTACTTCAGCTGGTAAGAAATAC</genome_strand>
        <mrna_strand>ACAGAGGTAGAAGAACAGCAGACGCAATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTTACACTTATGTGTCGGAGCTATGGAGGAAGAAGCAGTCGGATGTTATGAGGTTCTTGCAAAGGGTGAGGTGCTGGGAGTACCGTCAACTCCCTTCTATCGTCCGTGTCACCAGGCCTACACGTCCTGACAAGAGCAC-CNGGNCCNNCCNAGNNNCCNN.....................................................................................................................................................................................................................................................................................................................................TTTTGGGATACAAGGCCAAGCAG.....................................................................................................................................................GGTTATGTGGTCTATCGTGTTCGTGTGAAACGTGGTGGAAGGAAGAGGCCTGTTTCAAAGGGTATTGTGTATGGTAAGCCCACCAACCAGGGAGTCACACAATTGAAATTCCAGCGCACCAAGCGATCTGTTGCTGAGGAGCGTGCTGGAAGGAAGTTGGGTGGTCTTAGAGTCCTGAACTCCTACTGGATTAATGAG........................................................................................................................................................................................................................................................................................................................................................................................................GATTCTACCTACAAGTACTTTGAGGTAATATTGGTTGACCAGGCTCATGCTGCTATCCGCAATGATCCAAGGATCAACTGGATCTGCAACCCAGTGCATAAGCACAGAGAATTGCGTGGTCTTACTTCAGCTGGTAAGAAATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U332175" ref_strand="+" ref_description="SGN-U332175        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | beta-fructosidase (BFRUCT1) / beta-fructofuranosidase / cell wall invertase, identical to beta-fructofuranosidase GI:402740 from (Arabidopsis thaliana) | chr3:4532918-4535865 REVERSE | Aliases: MMM17.26(evalue: 2e-86, score=315) genbank/nr: gi|47078691|gb|AAT09980.1| cell wall apoplastic invertase [Vitis vinifera] (evalue: 1e-88, score=328)">
      <seq>catggctcagccttacagaactgcttatcatttccaacctcccaagaattggataaatggaccaatgatctacaagggaatttaccatttattttaccagtacaatcctgaaagtgcagaatggggaaacatagcatggggccattctacttcaactgatcttgtcaactggactattcatcctcccgctcttttgccttcagacgcatatgatatcaacggttgttggtcaggttctgcgacgatcctccaagatggcacaccagctatactctataccggaggcaattcacaaaaagttcaacttcaaaatctagctgtgcctaaagatccatccgacccttaccttgtcgaatgggttaaatctcctgataatccaatcatgataccgaatgaagatgagaaagaatcgtttagagacccaaccaccgcgtggttagggcctgatgggatttggagagttgttataggaaatgaaagagaaaacagaggaactgctgttttatataagagtgaagattttattcgttggactgaagcagagcggcctctgcattcgtccagtgaaactacaatgtgggaatgccctgattttttccctgtcttagttgacggggaaaatggacttgacatttcagagattttttcagggataaaacacgtgcttaaaaatagcgtggctcgttcatttgttgattattatactgttggagcgtatgaccatcacaacgatgtgtata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0106K23.1" temp_strand="+" temp_description="C06HBa0106K23.1  AC211043.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0106K23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="85243" stop="87035"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85543" g_stop="85601" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85602" i_stop="85957" i_length="356">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85958" g_stop="86131" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="233" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="86132" i_stop="86228" i_length="97">
            <donor d_prob="0.393" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="86229" g_stop="86735" g_length="507"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="740" r_length="507" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0106K23.1" gen_strand="+" ref_id="SGN-U332175" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>740</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0106K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U332175" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85543" e_stop="85601"/>
          <exon e_start="85958" e_stop="86131"/>
          <exon e_start="86229" e_stop="86735"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGGCTCAGCCTTACAGAACTGCTTATCATTTCCAACCTCCCAAGAATTGGATAAATGGTACATTCTTAACACACTCATTCTTCTTCAGAAATATGATTAATTTTGTGTAATCTAGTCGAAGTTAATTCTTTTTAATTGATTTATGTTCCGATGAATCGTGTGATTGACTTGTAATGCTGATGAACTGGGAATACATGGCATGTCGTTGAATTTACAGATCCTAATGGTAAGTTTTCCAGTCTAATCATCAATGTTCTGTTTAGAGAACTTACAATTTTATTACATTGATCTACCTTTTAAATAGCAATATAATGTCAAGTAATAGTAGTAGCAAATTGTTTTGCCAATTTTACCCTCCGTGTTTGTTTGAAAAAAAATACCTTCTTCACGAACACTTGTCATTATATTTGCAGGACCAATGATCTACAAGGGAATTTACCATTTATTTTACCAGTACAATCCTGAAAGTGCAGAATGGGGAAACATAGCATGGGGCCATTCTACTTCAACTGATCTTGTCAACTGGACTATTCATCCTCCCGCTCTTTTGCCTTCAGACGCATATGATATCAACGGTTGTTGGTCAGGTTGTTACGATTTTTGTGAAAATATTTTGTTTATTATTTCAGGAGATAGATCGATATCATTATATCAAGTATAAATAAAAAATTCATTTCTTCACAGGTTCTGCGACGATCCTCCAAGATGGCACACCAGCTATACTCTATACCGGAGGCAATTCACAAAAAGTTCAACTTCAAAATCTAGCTGTGCCTAAAGATCCATCCGACCCTTACCTTGTCGAATGGGTTAAATCTCCTGATAATCCAATCATGATACCGAATGAAGATGAGAAAGAATCGTTTAGAGACCCAACCACCGCGTGGTTAGGGCCTGATGGGATTTGGAGAGTTGTTATAGGAAATGAAAGAGAAAACAGAGGAACTGCTGTTTTATATAAGAGTGAAGATTTTATTCGTTGGACTGAAGCAGAGCGGCCTCTGCATTCGTCCAGTGAAACTACAATGTGGGAATGCCCTGATTTTTTCCCTGTCTTAGTTGACGGGGAAAATGGACTTGACATTTCAGAGATTTTTTCAGGGATAAAACACGTGCTTAAAAATAGCGTGGCTCGTTCATTTGTTGATTATTATACTGTTGGAGCGTATGACCATCACAACGATGTGTATA</genome_strand>
        <mrna_strand>CATGGCTCAGCCTTACAGAACTGCTTATCATTTCCAACCTCCCAAGAATTGGATAAATG....................................................................................................................................................................................................................................................................................................................................................................GACCAATGATCTACAAGGGAATTTACCATTTATTTTACCAGTACAATCCTGAAAGTGCAGAATGGGGAAACATAGCATGGGGCCATTCTACTTCAACTGATCTTGTCAACTGGACTATTCATCCTCCCGCTCTTTTGCCTTCAGACGCATATGATATCAACGGTTGTTGGTCAG.................................................................................................GTTCTGCGACGATCCTCCAAGATGGCACACCAGCTATACTCTATACCGGAGGCAATTCACAAAAAGTTCAACTTCAAAATCTAGCTGTGCCTAAAGATCCATCCGACCCTTACCTTGTCGAATGGGTTAAATCTCCTGATAATCCAATCATGATACCGAATGAAGATGAGAAAGAATCGTTTAGAGACCCAACCACCGCGTGGTTAGGGCCTGATGGGATTTGGAGAGTTGTTATAGGAAATGAAAGAGAAAACAGAGGAACTGCTGTTTTATATAAGAGTGAAGATTTTATTCGTTGGACTGAAGCAGAGCGGCCTCTGCATTCGTCCAGTGAAACTACAATGTGGGAATGCCCTGATTTTTTCCCTGTCTTAGTTGACGGGGAAAATGGACTTGACATTTCAGAGATTTTTTCAGGGATAAAACACGTGCTTAAAAATAGCGTGGCTCGTTCATTTGTTGATTATTATACTGTTGGAGCGTATGACCATCACAACGATGTGTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U323917" ref_strand="+" ref_description="SGN-U323917        Tomato 200607 #1 [6 ESTs aligned] arabidopsis/peptide: | Symbol: None | beta-fructosidase, putative / beta-fructofuranosidase, putative, similar to beta-fructofuranosidase GI:402740 | chr1:20570265-20572943 FORWARD | Aliases: T7N22.6, T7N22_6(evalue: 5e-79, score=291) genbank/nr: gi|18405222|ref|NP_564676.1| glycosyl hydrolase family 32 [Arabidopsis thaliana](evalue: 4e-77, score=291)">
      <seq>acaagtaaggaaatcgatttaattaaaggatggtctggtcttcagtcgtttcctaggaaaatttggctggataaaggtggaaagcaattggttcaatggcctgttgaagaaatcgaaatgctgaggacaaacaaagttgatttacaaaatataacactcgaagctggtttaaaacgtgagatttgtggtgtcactgctgcacaggctgatgtagaaatctccttctcaattccaattgcggtgcttgagcaggcagaggtgctggaatcaaattggacgaatccacaagagatagctaaccaaagtggttcattagccaacactggtgttggaccttttgggttgctagttttggcctcaaataaaattgaagaatatacagcaatattctttagaattttcaaaaagaatgacaagtttgttgtgttaatgggctgtgaccaaaaaaggtcatctgtgggccttgaatatgataaaaccaattatggagcctttttggacattgatcctcttacagaaaaattatcactaagaactttgattgatcattcgattgtagaaagctttggcggaggtggaaaagcttgcatcacaacaagagcttatccaactttggccatcaatgataatgcccatatttttgttttcaacaatggatcccaacatgttgacatctccactttgagtgcttggagcctaaaccaggctcacatcaattgaatcattaattcaaaatgtaatttttaaaattttcaaccaccaaaacatttggagaagtctttgccattttgttcattttaaagtttgtttgaatcgtttactgctcttgcatttatgtaactacaactacatacttgcccttttttacttgtcattcttacgcaataatctactttacagacgtgtgtacgcaacattttaaatgtgtaattttaaatttatcatgtaaaatattgaagacattctttttgaaacattttttttttaaaaaaagaaaagtaaaatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0106K23-TwzhI/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0106K23.1" temp_strand="+" temp_description="C06HBa0106K23.1  AC211043.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0106K23 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="86564" stop="88579"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86864" g_stop="86908" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="45" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86909" i_stop="87017" i_length="109">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.848" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="87018" g_stop="87176" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="46" r_stop="204" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="87177" i_stop="87275" i_length="99">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="87276" g_stop="87520" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="449" r_length="245" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="87521" i_stop="87621" i_length="101">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87622" g_stop="87712" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="540" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="87713" i_stop="87810" i_length="98">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="87811" g_stop="88279" g_length="469"/>
          <reference_exon_boundary r_type="cDNA" r_start="541" r_stop="1008" r_length="468" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0106K23.1" gen_strand="+" ref_id="SGN-U323917" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1009</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0106K23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U323917" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86864" e_stop="86908"/>
          <exon e_start="87018" e_stop="87176"/>
          <exon e_start="87276" e_stop="87520"/>
          <exon e_start="87622" e_stop="87712"/>
          <exon e_start="87811" e_stop="88279"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAGTAAGGAAATCGATTTAATTAAAGGATGGTCTGGTCTTCAGGTAATAATTCGTTTAGGTGACCATTTATTTTTATCCCAAAGACAAATTTAATTTTGAACTTCTCATTTTTCCGTCAAAACTAAAGTTCAATATCCTTGTACTATTACAGTCGTTTCCTAGGAAAATTTGGCTGGATAAAGGTGGAAAGCAATTGGTTCAATGGCCTGTTGAAGAAATCGAAATGCTGAGGACAAACAAAGTTGATTTACAAAATATAACACTCGAAGCTGGTTTAAAACGTGAGATTTGTGGTGTCACTGCTGCACAGGTATAATTCTTCCTATGCAAAAGCTTGTCAATTTCTTTTGTTGATATTATTCGTCCAAATTCAAAACAACTTGCTAATTTGACACTCATAATACGACAGGCTGATGTAGAAATCTCCTTCTCAATTCCAATTGCGGTGCTTGAGCAGGCAGAGGTGCTGGAATCAAATTGGACGAATCCACAAGAGATAGCTAACCAAAGTGGTTCATTAGCCAACACTGGTGTTGGACCTTTTGGGTTGCTAGTTTTGGCCTCAAATAAAATTGAAGAATATACAGCAATATTCTTTAGAATTTTCAAAAAGAATGACAAGTTTGTTGTGTTAATGGGCTGTGACCAAAAAAGGTACAAAAATCACCCTGGATTTGGTTTTACATTGATAACCAATAAATTTTTGTTTTCTACTTGTAGATTTATAGATTGAGAGTAAATTTTTTGAAATGCAGGTCATCTGTGGGCCTTGAATATGATAAAACCAATTATGGAGCCTTTTTGGACATTGATCCTCTTACAGAAAAATTATCACTAAGAACTTTGGTAAGTTTCACTATCGAATTAATTATACATATCAGCGAGAGAGAAATAAAGTGAGAGCTCCTGGGGAGGAGTCTAATAAAAAGGATCTATTTTTTCAGATTGATCATTCGATTGTAGAAAGCTTTGGCGGAGGTGGAAAAGCTTGCATCACAACAAGAGCTTATCCAACTTTGGCCATCAATGATAATGCCCATATTTTTGTTTTCAACAATGGATCCCAACATGTTGACATCTCCACTTTGAGTGCTTGGAGCCTAAACCAGGCTCACATCAATTGAATCATTAATTCAAAATGTAATTTTTAAAATTTTCAACCACCAAAACATTTGGAGAAGTCTTTGCCATTTTGTTCATTTTAAAGTTTGTTTGAATCGTTTACTGCTCTTGCATTTATGTAACTACAACTACATACTTGCCCTTTTTTACTTGTCATTCTTACGCAATAATCTACTTTACAGACGTGTGTACGCAACATTTTAAATGTTGTAATTTTAAATTTATCATGTAAAATATTGAAGACATTCTTTTTGAAACATTTTTTTTTTAAAAAAAGAAAAGTAAAATACT</genome_strand>
        <mrna_strand>ACAAGTAAGGAAATCGATTTAATTAAAGGATGGTCTGGTCTTCAG.............................................................................................................TCGTTTCCTAGGAAAATTTGGCTGGATAAAGGTGGAAAGCAATTGGTTCAATGGCCTGTTGAAGAAATCGAAATGCTGAGGACAAACAAAGTTGATTTACAAAATATAACACTCGAAGCTGGTTTAAAACGTGAGATTTGTGGTGTCACTGCTGCACAG...................................................................................................GCTGATGTAGAAATCTCCTTCTCAATTCCAATTGCGGTGCTTGAGCAGGCAGAGGTGCTGGAATCAAATTGGACGAATCCACAAGAGATAGCTAACCAAAGTGGTTCATTAGCCAACACTGGTGTTGGACCTTTTGGGTTGCTAGTTTTGGCCTCAAATAAAATTGAAGAATATACAGCAATATTCTTTAGAATTTTCAAAAAGAATGACAAGTTTGTTGTGTTAATGGGCTGTGACCAAAAAAG.....................................................................................................GTCATCTGTGGGCCTTGAATATGATAAAACCAATTATGGAGCCTTTTTGGACATTGATCCTCTTACAGAAAAATTATCACTAAGAACTTTG..................................................................................................ATTGATCATTCGATTGTAGAAAGCTTTGGCGGAGGTGGAAAAGCTTGCATCACAACAAGAGCTTATCCAACTTTGGCCATCAATGATAATGCCCATATTTTTGTTTTCAACAATGGATCCCAACATGTTGACATCTCCACTTTGAGTGCTTGGAGCCTAAACCAGGCTCACATCAATTGAATCATTAATTCAAAATGTAATTTTTAAAATTTTCAACCACCAAAACATTTGGAGAAGTCTTTGCCATTTTGTTCATTTTAAAGTTTGTTTGAATCGTTTACTGCTCTTGCATTTATGTAACTACAACTACATACTTGCCCTTTTTTACTTGTCATTCTTACGCAATAATCTACTTTACAGACGTGTGTACGCAACATTTTAAATG-TGTAATTTTAAATTTATCATGTAAAATATTGAAGACATTCTTTTTGAAACATTTTTTTTTTAAAAAAAGAAAAGTAAAATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>13</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="12556" PGL_stop="8076"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="12556" e_stop="11954"/>
            <exon e_start="11098" e_stop="11046"/>
            <exon e_start="10641" e_stop="10549"/>
            <exon e_start="10475" e_stop="10252"/>
            <exon e_start="9496" e_stop="9430"/>
            <exon e_start="8682" e_stop="8578"/>
            <exon e_start="8431" e_stop="8076"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.940" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.881" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="12556" e_stop="11954" e_length="603"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.940">
            <gDNA_intron_boundary i_start="11953" i_stop="11099" i_length="855"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="11098" e_stop="11046" e_length="53"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.977">
            <gDNA_intron_boundary i_start="11045" i_stop="10642" i_length="404"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="10641" e_stop="10549" e_length="93"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.972">
            <gDNA_intron_boundary i_start="10548" i_stop="10476" i_length="73"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="10475" e_stop="10252" e_length="224"/>
          </exon>
          <intron i_serial="4" don_prob="0.993" acc_prob="0.997">
            <gDNA_intron_boundary i_start="10251" i_stop="9497" i_length="755"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="9496" e_stop="9430" e_length="67"/>
          </exon>
          <intron i_serial="5" don_prob="0.986" acc_prob="0.881">
            <gDNA_intron_boundary i_start="9429" i_stop="8683" i_length="747"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="8682" e_stop="8578" e_length="105"/>
          </exon>
          <intron i_serial="6" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="8577" i_stop="8432" i_length="146"/>
          </intron>
          <exon e_serial="7" e_score="0.994">
            <gDNA_exon_boundary e_start="8431" e_stop="8076" e_length="356"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12556" stop="11954"/>
              <exon start="11098" stop="11046"/>
              <exon start="10641" stop="10549"/>
              <exon start="10475" stop="10252"/>
              <exon start="9496" stop="9430"/>
              <exon start="8682" stop="8578"/>
              <exon start="8431" stop="8076"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U319828" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTAGATTCTACAAAGTTCCGTTCTTTGATGGAACACCCAACACAAATTTCACCATTGATAACAGTCCTCAAAACACTCTGAATTAACTCAGCACAACCTTAGAACAGAAGAGAGAAATCAAAAGAAAAAAAGGAAGTAGCTTTCCAGTTCCCCTTTATTCATCTGAAATGCCCACCATTGATTTAAGCAGAACACCTTCATGTGTCACTCTTTTTCCATCTTTTCAACAAGGACCCAAGATTCAATTTTCCCTTACAAAATCAGCTGTTAATTCGTTTCTGTATAGTTTTAAACCTAAAAGATTTCATTTCTTGAAACCATGTTCTTCCCTAAAGGAAACCAAGAAACAGCAGACCCTTTTGAAAACACCAAACAAATCTCCTCAGAGTTTCAGGAGACTGGTTAACTTGAACCCCAAAAATGATGATGGAGAGAGTGAGAGTGAGAGGGATAGTGGGTCAGGAGATGATGATAATGCTATTAAAGGTACCATTTTGGCTGGTCTTTTGATTGTGGGTGTGATTGGTGGATTTGGAACTGTTGGGTACATATACAAGGACCAGATCAATGCTTTCTTGAACCAGTTTTCTGGCATTATTGAAG : GTTACGGGCCAGCTGGATATGCTCTTTTTGTTGCAGTTTATGCTGGACTAGAA : ATCCTTGCAATACCTGCCATTCCGTTGACCATGTCGGCTGGTCTTCTATTTGGCACTGTCACTGGGACCATCATTGTTTCCATTGGTGGAACG : GTGGCGGCAAGTGTTGCATTCTTGATTGCCAGATATTTTGCTCGGGAACGTATTCTTAAGTTGGTCGAAGGGAACAAGAAATTTCTTGCAATAGACAAAGCAATTGGAGAAAATGGTTTCAAAGTTGTGACTCTTCTCCGTTTGAGCCCCTTGCTTCCATTTTCTCTCGGGAATTACCTTTATGGTCTTACTTCAGTCGAGTTTGTACCATATGTACTAGGAAG : TTGGCTAGGAATGCTTCCTGGATCATGGGCGTATGTGAGTGCAGGTGCATTTGGCCGTGCAATTCTT : CAAGAAGGATCTGAAATTGGCCTAGGAGGAAACCAGCTATTGACCCTTGGAGTTGGTTTATTGTTTACAGCACTTGCTGCAACTTATGTAACACGGCTCGCTAAG : GACGCTGTAAAAGATATTGAGTGAGCAGAATTATTTGTGCCCTAACCAAGTAGAGTTTACAAGCTCTTTTATCAACATGGACAACTAAAAAGGGCAGATCGGTGCACTAAACTCTCACTATGCACAACTACCTCGTGTAAATTGGAAAAACGATATACAGTTAATGAAATCAGATAGGACAAGTTGAGTTGTATCATCTTATTTGTATCATATCATTGATTCTTGATGCGTAGAGGATGAACAGAAAGGAATAGAAGGATTAATTAGCCCCTATTTGTGCTTTATGTTTGTAGCACAATTATGATTTTATTTGAATTGTATTAATCTAACTAATCTAAAAGCTTAAACTGTTGAGA</gDNA_template>
            <first_frame> V  D  S  T  K  F  R  S  L  M  E  H  P  T  Q  I  S  P  L  I  T  V  L  K  T  L  *  I  N  S  A  Q  P  *  N  R  R  E  K  S  K  E  K  K  E  V  A  F  Q  F  P  F  I  H  L  K  C  P  P  L  I  *  A  E  H  L  H  V  S  L  F  F  H  L  F  N  K  D  P  R  F  N  F  P  L  Q  N  Q  L  L  I  R  F  C  I  V  L  N  L  K  D  F  I  S  *  N  H  V  L  P  *  R  K  P  R  N  S  R  P  F  *  K  H  Q  T  N  L  L  R  V  S  G  D  W  L  T  *  T  P  K  M  M  M  E  R  V  R  V  R  G  I  V  G  Q  E  M  M  I  M  L  L  K  V  P  F  W  L  V  F  *  L  W  V  *  L  V  D  L  E  L  L  G  T  Y  T  R  T  R  S  M  L  S  *  T  S  F  L  A  L  L  K  :  V  T  G  Q  L  D  M  L  F  L  L  Q  F  M  L  D  *  K :   S  L  Q  Y  L  P  F  R  *  P  C  R  L  V  F  Y  L  A  L  S  L  G  P  S  L  F  P  L  V  E  R :   W  R  Q  V  L  H  S  *  L  P  D  I  L  L  G  N  V  F  L  S  W  S  K  G  T  R  N  F  L  Q  *  T  K  Q  L  E  K  M  V  S  K  L  *  L  F  S  V  *  A  P  C  F  H  F  L  S  G  I  T  F  M  V  L  L  Q  S  S  L  Y  H  M  Y  *  E   : V  G  *  E  C  F  L  D  H  G  R  M  *  V  Q  V  H  L  A  V  Q  F  F :   K  K  D  L  K  L  A  *  E  E  T  S  Y  *  P  L  E  L  V  Y  C  L  Q  H  L  L  Q  L  M  *  H  G  S  L  R :   T  L  *  K  I  L  S  E  Q  N  Y  L  C  P  N  Q  V  E  F  T  S  S  F  I  N  M  D  N  *  K  G  Q  I  G  A  L  N  S  H  Y  A  Q  L  P  R  V  N  W  K  N  D  I  Q  L  M  K  S  D  R  T  S  *  V  V  S  S  Y  L  Y  H  I  I  D  S  *  C  V  E  D  E  Q  K  G  I  E  G  L  I  S  P  Y  L  C  F  M  F  V  A  Q  L  *  F  Y  L  N  C  I  N  L  T  N  L  K  A  *  T  V  E  </first_frame>
            <second_frame>  *  I  L  Q  S  S  V  L  *  W  N  T  Q  H  K  F  H  H  *  *  Q  S  S  K  H  S  E  L  T  Q  H  N  L  R  T  E  E  R  N  Q  K  K  K  R  K  *  L  S  S  S  P  L  F  I  *  N  A  H  H  *  F  K  Q  N  T  F  M  C  H  S  F  S  I  F  S  T  R  T  Q  D  S  I  F  P  Y  K  I  S  C  *  F  V  S  V  *  F  *  T  *  K  I  S  F  L  E  T  M  F  F  P  K  G  N  Q  E  T  A  D  P  F  E  N  T  K  Q  I  S  S  E  F  Q  E  T  G  *  L  E  P  Q  K  *  *  W  R  E  *  E  *  E  G  *  W  V  R  R  *  *  *  C  Y  *  R  Y  H  F  G  W  S  F  D  C  G  C  D  W  W  I  W  N  C  W  V  H  I  Q  G  P  D  Q  C  F  L  E  P  V  F  W  H  Y  *  R :   L  R  A  S  W  I  C  S  F  C  C  S  L  C  W  T  R   : N  P  C  N  T  C  H  S  V  D  H  V  G  W  S  S  I  W  H  C  H  W  D  H  H  C  F  H  W  W  N   : G  G  G  K  C  C  I  L  D  C  Q  I  F  C  S  G  T  Y  S  *  V  G  R  R  E  Q  E  I  S  C  N  R  Q  S  N  W  R  K  W  F  Q  S  C  D  S  S  P  F  E  P  L  A  S  I  F  S  R  E  L  P  L  W  S  Y  F  S  R  V  C  T  I  C  T  R  K  :  L  A  R  N  A  S  W  I  M  G  V  C  E  C  R  C  I  W  P  C  N  S   : S  R  R  I  *  N  W  P  R  R  K  P  A  I  D  P  W  S  W  F  I  V  Y  S  T  C  C  N  L  C  N  T  A  R  *   : G  R  C  K  R  Y  *  V  S  R  I  I  C  A  L  T  K  *  S  L  Q  A  L  L  S  T  W  T  T  K  K  G  R  S  V  H  *  T  L  T  M  H  N  Y  L  V  *  I  G  K  T  I  Y  S  *  *  N  Q  I  G  Q  V  E  L  Y  H  L  I  C  I  I  S  L  I  L  D  A  *  R  M  N  R  K  E  *  K  D  *  L  A  P  I  C  A  L  C  L  *  H  N  Y  D  F  I  *  I  V  L  I  *  L  I  *  K  L  K  L  L  R </second_frame>
            <third_frame>   R  F  Y  K  V  P  F  F  D  G  T  P  N  T  N  F  T  I  D  N  S  P  Q  N  T  L  N  *  L  S  T  T  L  E  Q  K  R  E  I  K  R  K  K  G  S  S  F  P  V  P  L  Y  S  S  E  M  P  T  I  D  L  S  R  T  P  S  C  V  T  L  F  P  S  F  Q  Q  G  P  K  I  Q  F  S  L  T  K  S  A  V  N  S  F  L  Y  S  F  K  P  K  R  F  H  F  L  K  P  C  S  S  L  K  E  T  K  K  Q  Q  T  L  L  K  T  P  N  K  S  P  Q  S  F  R  R  L  V  N  L  N  P  K  N  D  D  G  E  S  E  S  E  R  D  S  G  S  G  D  D  D  N  A  I  K  G  T  I  L  A  G  L  L  I  V  G  V  I  G  G  F  G  T  V  G  Y  I  Y  K  D  Q  I  N  A  F  L  N  Q  F  S  G  I  I  E   : G  Y  G  P  A  G  Y  A  L  F  V  A  V  Y  A  G  L  E  :  I  L  A  I  P  A  I  P  L  T  M  S  A  G  L  L  F  G  T  V  T  G  T  I  I  V  S  I  G  G  T  :  V  A  A  S  V  A  F  L  I  A  R  Y  F  A  R  E  R  I  L  K  L  V  E  G  N  K  K  F  L  A  I  D  K  A  I  G  E  N  G  F  K  V  V  T  L  L  R  L  S  P  L  L  P  F  S  L  G  N  Y  L  Y  G  L  T  S  V  E  F  V  P  Y  V  L  G  S :   W  L  G  M  L  P  G  S  W  A  Y  V  S  A  G  A  F  G  R  A  I  L  :  Q  E  G  S  E  I  G  L  G  G  N  Q  L  L  T  L  G  V  G  L  L  F  T  A  L  A  A  T  Y  V  T  R  L  A  K  :  D  A  V  K  D  I  E  *  A  E  L  F  V  P  *  P  S  R  V  Y  K  L  F  Y  Q  H  G  Q  L  K  R  A  D  R  C  T  K  L  S  L  C  T  T  T  S  C  K  L  E  K  R  Y  T  V  N  E  I  R  *  D  K  L  S  C  I  I  L  F  V  S  Y  H  *  F  L  M  R  R  G  *  T  E  R  N  R  R  I  N  *  P  L  F  V  L  Y  V  C  S  T  I  M  I  L  F  E  L  Y  *  S  N  *  S  K  S  L  N  C  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0106K23.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12470" stop="11954"/>
                    <exon start="11098" stop="11046"/>
                    <exon start="10641" stop="10549"/>
                    <exon start="10475" stop="10252"/>
                    <exon start="9496" stop="9430"/>
                    <exon start="8682" stop="8578"/>
                    <exon start="8431" stop="8408"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1080</number_coding_nucleotides>
                  <number_encoded_amino_acids>360</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSTTLEQKREIKRKKGSSFPVPLYSSEMPTIDLSRTPSCVTLFPSFQQGPKIQFSLTKSAVNSFLYSFKPKRFHFLKPCSSLKETKKQQTLLKTPNKSPQSFRRLVNLNPKNDDGESESERDSGSGDDDNAIKGTILAGLLIVGVIGGFGTVGYIYKDQINAFLNQFSGIIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGTVTGTIIVSIGGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVEFVPYVLGSWLGMLPGSWAYVSAGAFGRAILQEGSEIGLGGNQLLTLGVGLLFTALAATYVTRLAKDAVKDIE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="19512" PGL_stop="17221"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="19512" e_stop="19383"/>
            <exon e_start="19084" e_stop="18939"/>
            <exon e_start="18742" e_stop="18607"/>
            <exon e_start="18335" e_stop="18313"/>
            <exon e_start="17729" e_stop="17272"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.665" e_score="1.000"/>
          <exon-intron don_prob="0.909" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.450" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="19512" e_stop="19383" e_length="130"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.665">
            <gDNA_intron_boundary i_start="19382" i_stop="19085" i_length="298"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="19084" e_stop="18939" e_length="146"/>
          </exon>
          <intron i_serial="2" don_prob="0.909" acc_prob="0.994">
            <gDNA_intron_boundary i_start="18938" i_stop="18743" i_length="196"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="18742" e_stop="18607" e_length="136"/>
          </exon>
          <intron i_serial="3" don_prob="0.979" acc_prob="0.995">
            <gDNA_intron_boundary i_start="18606" i_stop="18336" i_length="271"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="18335" e_stop="18313" e_length="23"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.450">
            <gDNA_intron_boundary i_start="18312" i_stop="17730" i_length="583"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="17729" e_stop="17272" e_length="458"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19512" stop="19383"/>
              <exon start="19084" stop="18939"/>
              <exon start="18742" stop="18607"/>
              <exon start="18335" stop="18313"/>
              <exon start="17729" stop="17272"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317346" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATCCCAAATAGTGTTATAGTGGATTGCACTGCAGACTCTCATATCGCAAGCCATTACTATGACTGGTTGCATAGAGGAATCCATGTGGTCACCCCAAATAAAAAGGCTAATTCAGGACCACTTGACCGG : TACTTGAAGCTGAGAGATCTACAACGACAATCATATACACACTACTTCTATGAAGCTACTGTTGGAGCTGGACTACCAATCATTAGCACCTTACGTGGTCTTCTTGAAACTGGGGACAAGATTTTGCGGATTGAGGGTATTTTTAG : TGGAACTCTGAGTTACATATTTAATAACTTCATGGGGACAAAAGCTTTTAGCCAAGTGGTGAAGGAGGCGAAAGAGGCTGGTTATACTGAGCCAGATCCAAGGGATGACCTATCTGGAACAGACGTTGCCAGAAAG : GTGATAATTCTTGCTAGAGAAAG : TGGATGTTGTCAACGGAAAAGGTGCTGTTGAATTGCGGAGATACAACAAGGACCATCCATTCGCGCAACTCTCTGGATCGGACAACATAATTGCATTCACTACTGAAAGATATTGTAAGCAACCTCTAATAGTTCGTGGTCCGGGAGCTGGGGCTGAAGTGACAGCAGGTGGAATATTCAGTGATATATTGCGACTTGCCTCATATCTTGGTGCTCCATCATAATTCATGGTGCTTCCCCCCAGTAATCGTAATTCTGCATTTCGTTTGGTCATCCCCCTTGCTTATAGTAGCAGCAGATATATAGTTACATGATTGTTGTGTAATTGTGAGCAACTGATAGTGTTGCTCACTTTGTATCATGGCGCTTATCATCGTAGGTTGCTTATTTAGGAATAAGTCTGATAGGTACTAAAGCTGTATGATGGTCATATGATGTTGTATGTCAATGGAATTAAT</gDNA_template>
            <first_frame> H  P  K  *  C  Y  S  G  L  H  C  R  L  S  Y  R  K  P  L  L  *  L  V  A  *  R  N  P  C  G  H  P  K  *  K  G  *  F  R  T  T  *  P   : V  L  E  A  E  R  S  T  T  T  I  I  Y  T  L  L  L  *  S  Y  C  W  S  W  T  T  N  H  *  H  L  T  W  S  S  *  N  W  G  Q  D  F  A  D  *  G  Y  F  *  :  W  N  S  E  L  H  I  *  *  L  H  G  D  K  S  F  *  P  S  G  E  G  G  E  R  G  W  L  Y  *  A  R  S  K  G  *  P  I  W  N  R  R  C  Q  K   : G  D  N  S  C  *  R  K  :  W  M  L  S  T  E  K  V  L  L  N  C  G  D  T  T  R  T  I  H  S  R  N  S  L  D  R  T  T  *  L  H  S  L  L  K  D  I  V  S  N  L  *  *  F  V  V  R  E  L  G  L  K  *  Q  Q  V  E  Y  S  V  I  Y  C  D  L  P  H  I  L  V  L  H  H  N  S  W  C  F  P  P  V  I  V  I  L  H  F  V  W  S  S  P  L  L  I  V  A  A  D  I  *  L  H  D  C  C  V  I  V  S  N  *  *  C  C  S  L  C  I  M  A  L  I  I  V  G  C  L  F  R  N  K  S  D  R  Y  *  S  C  M  M  V  I  *  C  C  M  S  M  E  L   </first_frame>
            <second_frame>  I  P  N  S  V  I  V  D  C  T  A  D  S  H  I  A  S  H  Y  Y  D  W  L  H  R  G  I  H  V  V  T  P  N  K  K  A  N  S  G  P  L  D  R  :  Y  L  K  L  R  D  L  Q  R  Q  S  Y  T  H  Y  F  Y  E  A  T  V  G  A  G  L  P  I  I  S  T  L  R  G  L  L  E  T  G  D  K  I  L  R  I  E  G  I  F  S :   G  T  L  S  Y  I  F  N  N  F  M  G  T  K  A  F  S  Q  V  V  K  E  A  K  E  A  G  Y  T  E  P  D  P  R  D  D  L  S  G  T  D  V  A  R  K  :  V  I  I  L  A  R  E  S :   G  C  C  Q  R  K  R  C  C  *  I  A  E  I  Q  Q  G  P  S  I  R  A  T  L  W  I  G  Q  H  N  C  I  H  Y  *  K  I  L  *  A  T  S  N  S  S  W  S  G  S  W  G  *  S  D  S  R  W  N  I  Q  *  Y  I  A  T  C  L  I  S  W  C  S  I  I  I  H  G  A  S  P  Q  *  S  *  F  C  I  S  F  G  H  P  P  C  L  *  *  Q  Q  I  Y  S  Y  M  I  V  V  *  L  *  A  T  D  S  V  A  H  F  V  S  W  R  L  S  S  *  V  A  Y  L  G  I  S  L  I  G  T  K  A  V  *  W  S  Y  D  V  V  C  Q  W  N  *  </second_frame>
            <third_frame>   S  Q  I  V  L  *  W  I  A  L  Q  T  L  I  S  Q  A  I  T  M  T  G  C  I  E  E  S  M  W  S  P  Q  I  K  R  L  I  Q  D  H  L  T  G :   T  *  S  *  E  I  Y  N  D  N  H  I  H  T  T  S  M  K  L  L  L  E  L  D  Y  Q  S  L  A  P  Y  V  V  F  L  K  L  G  T  R  F  C  G  L  R  V  F  L   : V  E  L  *  V  T  Y  L  I  T  S  W  G  Q  K  L  L  A  K  W  *  R  R  R  K  R  L  V  I  L  S  Q  I  Q  G  M  T  Y  L  E  Q  T  L  P  E  R :   *  *  F  L  L  E  K   : V  D  V  V  N  G  K  G  A  V  E  L  R  R  Y  N  K  D  H  P  F  A  Q  L  S  G  S  D  N  I  I  A  F  T  T  E  R  Y  C  K  Q  P  L  I  V  R  G  P  G  A  G  A  E  V  T  A  G  G  I  F  S  D  I  L  R  L  A  S  Y  L  G  A  P  S  *  F  M  V  L  P  P  S  N  R  N  S  A  F  R  L  V  I  P  L  A  Y  S  S  S  R  Y  I  V  T  *  L  L  C  N  C  E  Q  L  I  V  L  L  T  L  Y  H  G  A  Y  H  R  R  L  L  I  *  E  *  V  *  *  V  L  K  L  Y  D  G  H  M  M  L  Y  V  N  G  I  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0106K23.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19511" stop="19383"/>
                    <exon start="19084" stop="18939"/>
                    <exon start="18742" stop="18607"/>
                    <exon start="18335" stop="18313"/>
                    <exon start="17729" stop="17699"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>462</number_coding_nucleotides>
                  <number_encoded_amino_acids>154</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IPNSVIVDCTADSHIASHYYDWLHRGIHVVTPNKKANSGPLDRYLKLRDLQRQSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYIFNNFMGTKAFSQVVKEAKEAGYTEPDPRDDLSGTDVARKVIILARESGCCQRKRCC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="19479" e_stop="18939"/>
            <exon e_start="18742" e_stop="18607"/>
            <exon e_start="18335" e_stop="18252"/>
            <exon e_start="18167" e_stop="18075"/>
            <exon e_start="17751" e_stop="17221"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.909" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.861" acc_prob="0.985" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="19479" e_stop="18939" e_length="541"/>
          </exon>
          <intron i_serial="1" don_prob="0.909" acc_prob="0.994">
            <gDNA_intron_boundary i_start="18938" i_stop="18743" i_length="196"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="18742" e_stop="18607" e_length="136"/>
          </exon>
          <intron i_serial="2" don_prob="0.979" acc_prob="0.995">
            <gDNA_intron_boundary i_start="18606" i_stop="18336" i_length="271"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="18335" e_stop="18252" e_length="84"/>
          </exon>
          <intron i_serial="3" don_prob="0.989" acc_prob="0.999">
            <gDNA_intron_boundary i_start="18251" i_stop="18168" i_length="84"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="18167" e_stop="18075" e_length="93"/>
          </exon>
          <intron i_serial="4" don_prob="0.861" acc_prob="0.985">
            <gDNA_intron_boundary i_start="18074" i_stop="17752" i_length="323"/>
          </intron>
          <exon e_serial="5" e_score="0.992">
            <gDNA_exon_boundary e_start="17751" e_stop="17221" e_length="531"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19479" stop="18939"/>
              <exon start="18742" stop="18607"/>
              <exon start="18335" stop="18252"/>
              <exon start="18167" stop="18075"/>
              <exon start="17751" stop="17221"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317345" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGACTCTCATATCGCAAGCCATTACTATGACTGGTTGCATAGAGGAATCCATGTGGTCACCCCAAATAAAAAGGCTAATTCAGGACCACTTGACCGGGTAACTAAGTACTTTCATGTTTGATTTCATTTCCTCTTAAAAGTGCTTAACCTCGCAAACTTTCTTGCGCTTTGATCCACTATGTCAATAATCAAGTTTTCAGCCCTTGGTAATTATATTTTTCTTTACGCTGTCTTTCCATTATGATAGAATTGAAGACCTTGTAAAACTTTTGTCGTTATCTCTATTACAAAAATACCTCGAGACGAAACCAGCTAGTAAACGGCAATTATAAATAGCTGGAGGAGGAAGCTTCTCATACTTTTTATTTTTTTAATTTTCCTTCTATTGCCTCCAGTACTTGAAGCTGAGAGATCTACAACGACAATCATATACACACTACTTCTATGAAGCTACTGTTGGAGCTGGACTACCAATCATTAGCACCTTACGTGGTCTTCTTGAAACTGGGGACAAGATTTTGCGGATTGAGGGTATTTTTAG : TGGAACTCTGAGTTACATATTTAATAACTTCATGGGGACAAAAGCTTTTAGCCAAGTGGTGAAGGAGGCGAAAGAGGCTGGTTATACTGAGCCAGATCCAAGGGATGACCTATCTGGAACAGACGTTGCCAGAAAG : GTGATAATTCTTGCTAGAGAAAGTGGATTAAACCTAGAGCTTTCAGATATCCCTGTTCAGAGCCTTGTGCCAGAACCTTTAAGG : GCTACTGCATCTGCCGAGGACTTTTTGCTGGACCTTCCAAAATTTGATCATGAGTTGTCTAAACAGAGGCAGGAGGCTGAAGATGAAGAGGAG : GTCTTGAGGTATGTTGGAGTAGTGGATGTTGTCAACGGAAAAGGTGCTGTTGAATTGCGGAGATACAACAAGGACCATCCATTCGCGCAACTCTCTGGATCGGACAACATAATTGCATTCACTACTGAAAGATATTGTAAGCAACCTCTAATAGTTCGTGGTCCGGGAGCTGGGGCTGAAGTGACAGCAGGTGGAATATTCAGTGATATATTGCGACTTGCCTCATATCTTGGTGCTCCATCATAATTCATGGTGCTTCCCCCCAGTAATCGTAATTCTGCATTTCGTTTGGTCATCCCCCTTGCTTATAGTAGCAGCAGATATATAGTTACATGATTGTTGTGTAATTGTGAGCAACTGATAGTGTTGCTCACTTTGTATCATGGCGCTTATCATCGTAGGTTGCTTATTTAGGAATAAGTCTGATAGGTACTAAAGCTGTATGATGGTCATATGATGTTGTATGTCAATGGAATTAATTAACTGTTCAAAGCTTTCTTTTTGCTTTATAATTATTGGAATTCACCTCAG</gDNA_template>
            <first_frame> R  L  S  Y  R  K  P  L  L  *  L  V  A  *  R  N  P  C  G  H  P  K  *  K  G  *  F  R  T  T  *  P  G  N  *  V  L  S  C  L  I  S  F  P  L  K  S  A  *  P  R  K  L  S  C  A  L  I  H  Y  V  N  N  Q  V  F  S  P  W  *  L  Y  F  S  L  R  C  L  S  I  M  I  E  L  K  T  L  *  N  F  C  R  Y  L  Y  Y  K  N  T  S  R  R  N  Q  L  V  N  G  N  Y  K  *  L  E  E  E  A  S  H  T  F  Y  F  F  N  F  P  S  I  A  S  S  T  *  S  *  E  I  Y  N  D  N  H  I  H  T  T  S  M  K  L  L  L  E  L  D  Y  Q  S  L  A  P  Y  V  V  F  L  K  L  G  T  R  F  C  G  L  R  V  F  L   : V  E  L  *  V  T  Y  L  I  T  S  W  G  Q  K  L  L  A  K  W  *  R  R  R  K  R  L  V  I  L  S  Q  I  Q  G  M  T  Y  L  E  Q  T  L  P  E  R :   *  *  F  L  L  E  K  V  D  *  T  *  S  F  Q  I  S  L  F  R  A  L  C  Q  N  L  *  G :   L  L  H  L  P  R  T  F  C  W  T  F  Q  N  L  I  M  S  C  L  N  R  G  R  R  L  K  M  K  R  R :   S  *  G  M  L  E  *  W  M  L  S  T  E  K  V  L  L  N  C  G  D  T  T  R  T  I  H  S  R  N  S  L  D  R  T  T  *  L  H  S  L  L  K  D  I  V  S  N  L  *  *  F  V  V  R  E  L  G  L  K  *  Q  Q  V  E  Y  S  V  I  Y  C  D  L  P  H  I  L  V  L  H  H  N  S  W  C  F  P  P  V  I  V  I  L  H  F  V  W  S  S  P  L  L  I  V  A  A  D  I  *  L  H  D  C  C  V  I  V  S  N  *  *  C  C  S  L  C  I  M  A  L  I  I  V  G  C  L  F  R  N  K  S  D  R  Y  *  S  C  M  M  V  I  *  C  C  M  S  M  E  L  I  N  C  S  K  L  S  F  C  F  I  I  I  G  I  H  L   </first_frame>
            <second_frame>  D  S  H  I  A  S  H  Y  Y  D  W  L  H  R  G  I  H  V  V  T  P  N  K  K  A  N  S  G  P  L  D  R  V  T  K  Y  F  H  V  *  F  H  F  L  L  K  V  L  N  L  A  N  F  L  A  L  *  S  T  M  S  I  I  K  F  S  A  L  G  N  Y  I  F  L  Y  A  V  F  P  L  *  *  N  *  R  P  C  K  T  F  V  V  I  S  I  T  K  I  P  R  D  E  T  S  *  *  T  A  I  I  N  S  W  R  R  K  L  L  I  L  F  I  F  L  I  F  L  L  L  P  P  V  L  E  A  E  R  S  T  T  T  I  I  Y  T  L  L  L  *  S  Y  C  W  S  W  T  T  N  H  *  H  L  T  W  S  S  *  N  W  G  Q  D  F  A  D  *  G  Y  F  *  :  W  N  S  E  L  H  I  *  *  L  H  G  D  K  S  F  *  P  S  G  E  G  G  E  R  G  W  L  Y  *  A  R  S  K  G  *  P  I  W  N  R  R  C  Q  K   : G  D  N  S  C  *  R  K  W  I  K  P  R  A  F  R  Y  P  C  S  E  P  C  A  R  T  F  K   : G  Y  C  I  C  R  G  L  F  A  G  P  S  K  I  *  S  *  V  V  *  T  E  A  G  G  *  R  *  R  G   : G  L  E  V  C  W  S  S  G  C  C  Q  R  K  R  C  C  *  I  A  E  I  Q  Q  G  P  S  I  R  A  T  L  W  I  G  Q  H  N  C  I  H  Y  *  K  I  L  *  A  T  S  N  S  S  W  S  G  S  W  G  *  S  D  S  R  W  N  I  Q  *  Y  I  A  T  C  L  I  S  W  C  S  I  I  I  H  G  A  S  P  Q  *  S  *  F  C  I  S  F  G  H  P  P  C  L  *  *  Q  Q  I  Y  S  Y  M  I  V  V  *  L  *  A  T  D  S  V  A  H  F  V  S  W  R  L  S  S  *  V  A  Y  L  G  I  S  L  I  G  T  K  A  V  *  W  S  Y  D  V  V  C  Q  W  N  *  L  T  V  Q  S  F  L  F  A  L  *  L  L  E  F  T  S  </second_frame>
            <third_frame>   T  L  I  S  Q  A  I  T  M  T  G  C  I  E  E  S  M  W  S  P  Q  I  K  R  L  I  Q  D  H  L  T  G  *  L  S  T  F  M  F  D  F  I  S  S  *  K  C  L  T  S  Q  T  F  L  R  F  D  P  L  C  Q  *  S  S  F  Q  P  L  V  I  I  F  F  F  T  L  S  F  H  Y  D  R  I  E  D  L  V  K  L  L  S  L  S  L  L  Q  K  Y  L  E  T  K  P  A  S  K  R  Q  L  *  I  A  G  G  G  S  F  S  Y  F  L  F  F  *  F  S  F  Y  C  L  Q  Y  L  K  L  R  D  L  Q  R  Q  S  Y  T  H  Y  F  Y  E  A  T  V  G  A  G  L  P  I  I  S  T  L  R  G  L  L  E  T  G  D  K  I  L  R  I  E  G  I  F  S :   G  T  L  S  Y  I  F  N  N  F  M  G  T  K  A  F  S  Q  V  V  K  E  A  K  E  A  G  Y  T  E  P  D  P  R  D  D  L  S  G  T  D  V  A  R  K  :  V  I  I  L  A  R  E  S  G  L  N  L  E  L  S  D  I  P  V  Q  S  L  V  P  E  P  L  R  :  A  T  A  S  A  E  D  F  L  L  D  L  P  K  F  D  H  E  L  S  K  Q  R  Q  E  A  E  D  E  E  E  :  V  L  R  Y  V  G  V  V  D  V  V  N  G  K  G  A  V  E  L  R  R  Y  N  K  D  H  P  F  A  Q  L  S  G  S  D  N  I  I  A  F  T  T  E  R  Y  C  K  Q  P  L  I  V  R  G  P  G  A  G  A  E  V  T  A  G  G  I  F  S  D  I  L  R  L  A  S  Y  L  G  A  P  S  *  F  M  V  L  P  P  S  N  R  N  S  A  F  R  L  V  I  P  L  A  Y  S  S  S  R  Y  I  V  T  *  L  L  C  N  C  E  Q  L  I  V  L  L  T  L  Y  H  G  A  Y  H  R  R  L  L  I  *  E  *  V  *  *  V  L  K  L  Y  D  G  H  M  M  L  Y  V  N  G  I  N  *  L  F  K  A  F  F  L  L  Y  N  Y  W  N  S  P  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0106K23.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19105" stop="18939"/>
                    <exon start="18742" stop="18607"/>
                    <exon start="18335" stop="18252"/>
                    <exon start="18167" stop="18075"/>
                    <exon start="17751" stop="17506"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>723</number_coding_nucleotides>
                  <number_encoded_amino_acids>241</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSFYCLQYLKLRDLQRQSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYIFNNFMGTKAFSQVVKEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLNLELSDIPVQSLVPEPLRATASAEDFLLDLPKFDHELSKQRQEAEDEEEVLRYVGVVDVVNGKGAVELRRYNKDHPFAQLSGSDNIIAFTTERYCKQPLIVRGPGAGAEVTAGGIFSDILRLASYLGAPS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="19499" e_stop="19383"/>
            <exon e_start="19084" e_stop="18939"/>
            <exon e_start="18742" e_stop="18607"/>
            <exon e_start="18335" e_stop="18252"/>
            <exon e_start="18167" e_stop="18075"/>
            <exon e_start="17751" e_stop="17502"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.665" e_score="0.974"/>
          <exon-intron don_prob="0.909" acc_prob="0.994" e_score="0.966"/>
          <exon-intron don_prob="0.979" acc_prob="0.995" e_score="0.985"/>
          <exon-intron don_prob="0.989" acc_prob="0.999" e_score="0.964"/>
          <exon-intron don_prob="0.861" acc_prob="0.985" e_score="0.989"/>
          <exon-only e_score="0.968"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.974">
            <gDNA_exon_boundary e_start="19499" e_stop="19383" e_length="117"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.665">
            <gDNA_intron_boundary i_start="19382" i_stop="19085" i_length="298"/>
          </intron>
          <exon e_serial="2" e_score="0.966">
            <gDNA_exon_boundary e_start="19084" e_stop="18939" e_length="146"/>
          </exon>
          <intron i_serial="2" don_prob="0.909" acc_prob="0.994">
            <gDNA_intron_boundary i_start="18938" i_stop="18743" i_length="196"/>
          </intron>
          <exon e_serial="3" e_score="0.985">
            <gDNA_exon_boundary e_start="18742" e_stop="18607" e_length="136"/>
          </exon>
          <intron i_serial="3" don_prob="0.979" acc_prob="0.995">
            <gDNA_intron_boundary i_start="18606" i_stop="18336" i_length="271"/>
          </intron>
          <exon e_serial="4" e_score="0.964">
            <gDNA_exon_boundary e_start="18335" e_stop="18252" e_length="84"/>
          </exon>
          <intron i_serial="4" don_prob="0.989" acc_prob="0.999">
            <gDNA_intron_boundary i_start="18251" i_stop="18168" i_length="84"/>
          </intron>
          <exon e_serial="5" e_score="0.989">
            <gDNA_exon_boundary e_start="18167" e_stop="18075" e_length="93"/>
          </exon>
          <intron i_serial="5" don_prob="0.861" acc_prob="0.985">
            <gDNA_intron_boundary i_start="18074" i_stop="17752" i_length="323"/>
          </intron>
          <exon e_serial="6" e_score="0.968">
            <gDNA_exon_boundary e_start="17751" e_stop="17502" e_length="250"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19499" stop="19383"/>
              <exon start="19084" stop="18939"/>
              <exon start="18742" stop="18607"/>
              <exon start="18335" stop="18252"/>
              <exon start="18167" stop="18075"/>
              <exon start="17751" stop="17502"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U336057" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTATAGTGGATTGCACTGCAGACTCTCATATCGCAAGCCATTACTATGACTGGTTGCATAGAGGAATCCATGTGGTCACCCCAAATAAAAAGGCTAATTCAGGACCACTTGACCGG : TACTTGAAGCTGAGAGATCTACAACGACAATCATATACACACTACTTCTATGAAGCTACTGTTGGAGCTGGACTACCAATCATTAGCACCTTACGTGGTCTTCTTGAAACTGGGGACAAGATTTTGCGGATTGAGGGTATTTTTAG : TGGAACTCTGAGTTACATATTTAATAACTTCATGGGGACAAAAGCTTTTAGCCAAGTGGTGAAGGAGGCGAAAGAGGCTGGTTATACTGAGCCAGATCCAAGGGATGACCTATCTGGAACAGACGTTGCCAGAAAG : GTGATAATTCTTGCTAGAGAAAGTGGATTAAACCTAGAGCTTTCAGATATCCCTGTTCAGAGCCTTGTGCCAGAACCTTTAAGG : GCTACTGCATCTGCCGAGGACTTTTTGCTGGACCTTCCAAAATTTGATCATGAGTTGTCTAAACAGAGGCAGGAGGCTGAAGATGAAGAGGAG : GTCTTGAGGTATGTTGGAGTAGTGGATGTTGTCAACGGAAAAGGTGCTGTTGAATTGCGGAGATACAACAAGGACCATCCATTCGCGCAACTCTCTGGATCGGACAACATAATTGCATTCACTACTGAAAGATATTGTAAGCAACCTCTAATAGTTCGTGGTCCGGGAGCTGGGGCTGAAGTGACAGCAGGTGGAATATTCAGTGATATATTGCGACTTGCCTCATATCTTGGTGCTCCATCATAATTCA</gDNA_template>
            <first_frame> V  I  V  D  C  T  A  D  S  H  I  A  S  H  Y  Y  D  W  L  H  R  G  I  H  V  V  T  P  N  K  K  A  N  S  G  P  L  D  R  :  Y  L  K  L  R  D  L  Q  R  Q  S  Y  T  H  Y  F  Y  E  A  T  V  G  A  G  L  P  I  I  S  T  L  R  G  L  L  E  T  G  D  K  I  L  R  I  E  G  I  F  S :   G  T  L  S  Y  I  F  N  N  F  M  G  T  K  A  F  S  Q  V  V  K  E  A  K  E  A  G  Y  T  E  P  D  P  R  D  D  L  S  G  T  D  V  A  R  K  :  V  I  I  L  A  R  E  S  G  L  N  L  E  L  S  D  I  P  V  Q  S  L  V  P  E  P  L  R  :  A  T  A  S  A  E  D  F  L  L  D  L  P  K  F  D  H  E  L  S  K  Q  R  Q  E  A  E  D  E  E  E  :  V  L  R  Y  V  G  V  V  D  V  V  N  G  K  G  A  V  E  L  R  R  Y  N  K  D  H  P  F  A  Q  L  S  G  S  D  N  I  I  A  F  T  T  E  R  Y  C  K  Q  P  L  I  V  R  G  P  G  A  G  A  E  V  T  A  G  G  I  F  S  D  I  L  R  L  A  S  Y  L  G  A  P  S  *  F  </first_frame>
            <second_frame>  L  *  W  I  A  L  Q  T  L  I  S  Q  A  I  T  M  T  G  C  I  E  E  S  M  W  S  P  Q  I  K  R  L  I  Q  D  H  L  T  G :   T  *  S  *  E  I  Y  N  D  N  H  I  H  T  T  S  M  K  L  L  L  E  L  D  Y  Q  S  L  A  P  Y  V  V  F  L  K  L  G  T  R  F  C  G  L  R  V  F  L   : V  E  L  *  V  T  Y  L  I  T  S  W  G  Q  K  L  L  A  K  W  *  R  R  R  K  R  L  V  I  L  S  Q  I  Q  G  M  T  Y  L  E  Q  T  L  P  E  R :   *  *  F  L  L  E  K  V  D  *  T  *  S  F  Q  I  S  L  F  R  A  L  C  Q  N  L  *  G :   L  L  H  L  P  R  T  F  C  W  T  F  Q  N  L  I  M  S  C  L  N  R  G  R  R  L  K  M  K  R  R :   S  *  G  M  L  E  *  W  M  L  S  T  E  K  V  L  L  N  C  G  D  T  T  R  T  I  H  S  R  N  S  L  D  R  T  T  *  L  H  S  L  L  K  D  I  V  S  N  L  *  *  F  V  V  R  E  L  G  L  K  *  Q  Q  V  E  Y  S  V  I  Y  C  D  L  P  H  I  L  V  L  H  H  N  S </second_frame>
            <third_frame>   Y  S  G  L  H  C  R  L  S  Y  R  K  P  L  L  *  L  V  A  *  R  N  P  C  G  H  P  K  *  K  G  *  F  R  T  T  *  P   : V  L  E  A  E  R  S  T  T  T  I  I  Y  T  L  L  L  *  S  Y  C  W  S  W  T  T  N  H  *  H  L  T  W  S  S  *  N  W  G  Q  D  F  A  D  *  G  Y  F  *  :  W  N  S  E  L  H  I  *  *  L  H  G  D  K  S  F  *  P  S  G  E  G  G  E  R  G  W  L  Y  *  A  R  S  K  G  *  P  I  W  N  R  R  C  Q  K   : G  D  N  S  C  *  R  K  W  I  K  P  R  A  F  R  Y  P  C  S  E  P  C  A  R  T  F  K   : G  Y  C  I  C  R  G  L  F  A  G  P  S  K  I  *  S  *  V  V  *  T  E  A  G  G  *  R  *  R  G   : G  L  E  V  C  W  S  S  G  C  C  Q  R  K  R  C  C  *  I  A  E  I  Q  Q  G  P  S  I  R  A  T  L  W  I  G  Q  H  N  C  I  H  Y  *  K  I  L  *  A  T  S  N  S  S  W  S  G  S  W  G  *  S  D  S  R  W  N  I  Q  *  Y  I  A  T  C  L  I  S  W  C  S  I  I  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0106K23.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19499" stop="19383"/>
                    <exon start="19084" stop="18939"/>
                    <exon start="18742" stop="18607"/>
                    <exon start="18335" stop="18252"/>
                    <exon start="18167" stop="18075"/>
                    <exon start="17751" stop="17506"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>819</number_coding_nucleotides>
                  <number_encoded_amino_acids>273</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VIVDCTADSHIASHYYDWLHRGIHVVTPNKKANSGPLDRYLKLRDLQRQSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIFSGTLSYIFNNFMGTKAFSQVVKEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLNLELSDIPVQSLVPEPLRATASAEDFLLDLPKFDHELSKQRQEAEDEEEVLRYVGVVDVVNGKGAVELRRYNKDHPFAQLSGSDNIIAFTTERYCKQPLIVRGPGAGAEVTAGGIFSDILRLASYLGAPS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="24285" PGL_stop="21300"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24285" e_stop="24245"/>
            <exon e_start="24159" e_stop="23945"/>
            <exon e_start="23822" e_stop="23735"/>
            <exon e_start="23657" e_stop="23544"/>
            <exon e_start="22245" e_stop="22147"/>
            <exon e_start="21416" e_stop="21300"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="0.169" acc_prob="0.951" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.420" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="0.906"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="24285" e_stop="24245" e_length="41"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.974">
            <gDNA_intron_boundary i_start="24244" i_stop="24160" i_length="85"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="24159" e_stop="23945" e_length="215"/>
          </exon>
          <intron i_serial="2" don_prob="0.169" acc_prob="0.951">
            <gDNA_intron_boundary i_start="23944" i_stop="23823" i_length="122"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="23822" e_stop="23735" e_length="88"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.992">
            <gDNA_intron_boundary i_start="23734" i_stop="23658" i_length="77"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="23657" e_stop="23544" e_length="114"/>
          </exon>
          <intron i_serial="4" don_prob="0.988" acc_prob="0.420">
            <gDNA_intron_boundary i_start="23543" i_stop="22246" i_length="1298"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="22245" e_stop="22147" e_length="99"/>
          </exon>
          <intron i_serial="5" don_prob="0.991" acc_prob="0.993">
            <gDNA_intron_boundary i_start="22146" i_stop="21417" i_length="730"/>
          </intron>
          <exon e_serial="6" e_score="0.906">
            <gDNA_exon_boundary e_start="21416" e_stop="21300" e_length="117"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24285" stop="24245"/>
              <exon start="24159" stop="23945"/>
              <exon start="23822" stop="23735"/>
              <exon start="23657" stop="23544"/>
              <exon start="22245" stop="22147"/>
              <exon start="21416" stop="21300"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330804" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAATACTGGAGAGACTATCTTATCAAGAGGCATGGGAAATG : TCATATTTTGGTGCCAATGTCTTGCATCCACGGACAATTGTTCCAGTTATGCAATATGACATTCCTATCATTATAAAAAACATCTTTAACCTTGCTGCACCTGGAACAAGGATCTGCCGATCTACTGATAATGAATTTGTAGATGGACAGATATCAGAATCCCCTGTCAAAGGATTTGCAACGATTGACAAACTAGCTCTAGTGAATGTTGAGGG : AACCGGAATGACTGGTGTTCCTGGTACAGCTAGTGACATTTTTGGTGTAGTAAAAAGTGTTGGTGCTAACGTAATCATGATATCGCAG : GCTAGTAGTGAGCATTCAATCTGCTTTGCGGTGCCTGAAAAAGAAGTGAAAGCTGTTGCTGATGCTTTAGAGTCTAGGTTTGGTCAGGCTCTGAGTTCCGGGCGCCTTTCTCAG : ATTTCAGTGATTCCAGGCTGTAGTATTTTGGCTGCTGTTGGTCAGAGAATGGCAAGCTCTTCTGGAGTTAGTGCTACATTTTTCAGTGCACTTGCAAAG : GCAAATATTAATATTCGTGCTATAGCTCAAGGTTGCTCAGAGTACAATGTAACAGTAGTTGTTAAGCAAGAAGACTGTGTGAGGGCTTTACGTGCTGTGCACTCAAGATTCTATTTG</gDNA_template>
            <first_frame> *  Y  W  R  D  Y  L  I  K  R  H  G  K  C :   H  I  L  V  P  M  S  C  I  H  G  Q  L  F  Q  L  C  N  M  T  F  L  S  L  *  K  T  S  L  T  L  L  H  L  E  Q  G  S  A  D  L  L  I  M  N  L  *  M  D  R  Y  Q  N  P  L  S  K  D  L  Q  R  L  T  N  *  L  *  *  M  L  R   : E  P  E  *  L  V  F  L  V  Q  L  V  T  F  L  V  *  *  K  V  L  V  L  T  *  S  *  Y  R  R :   L  V  V  S  I  Q  S  A  L  R  C  L  K  K  K  *  K  L  L  L  M  L  *  S  L  G  L  V  R  L  *  V  P  G  A  F  L  R :   F  Q  *  F  Q  A  V  V  F  W  L  L  L  V  R  E  W  Q  A  L  L  E  L  V  L  H  F  S  V  H  L  Q  R :   Q  I  L  I  F  V  L  *  L  K  V  A  Q  S  T  M  *  Q  *  L  L  S  K  K  T  V  *  G  L  Y  V  L  C  T  Q  D  S  I   </first_frame>
            <second_frame>  N  T  G  E  T  I  L  S  R  G  M  G  N   : V  I  F  W  C  Q  C  L  A  S  T  D  N  C  S  S  Y  A  I  *  H  S  Y  H  Y  K  K  H  L  *  P  C  C  T  W  N  K  D  L  P  I  Y  *  *  *  I  C  R  W  T  D  I  R  I  P  C  Q  R  I  C  N  D  *  Q  T  S  S  S  E  C  *  G  :  N  R  N  D  W  C  S  W  Y  S  *  *  H  F  W  C  S  K  K  C  W  C  *  R  N  H  D  I  A   : G  *  *  *  A  F  N  L  L  C  G  A  *  K  R  S  E  S  C  C  *  C  F  R  V  *  V  W  S  G  S  E  F  R  A  P  F  S   : D  F  S  D  S  R  L  *  Y  F  G  C  C  W  S  E  N  G  K  L  F  W  S  *  C  Y  I  F  Q  C  T  C  K   : G  K  Y  *  Y  S  C  Y  S  S  R  L  L  R  V  Q  C  N  S  S  C  *  A  R  R  L  C  E  G  F  T  C  C  A  L  K  I  L  F  </second_frame>
            <third_frame>   I  L  E  R  L  S  Y  Q  E  A  W  E  M  :  S  Y  F  G  A  N  V  L  H  P  R  T  I  V  P  V  M  Q  Y  D  I  P  I  I  I  K  N  I  F  N  L  A  A  P  G  T  R  I  C  R  S  T  D  N  E  F  V  D  G  Q  I  S  E  S  P  V  K  G  F  A  T  I  D  K  L  A  L  V  N  V  E  G :   T  G  M  T  G  V  P  G  T  A  S  D  I  F  G  V  V  K  S  V  G  A  N  V  I  M  I  S  Q  :  A  S  S  E  H  S  I  C  F  A  V  P  E  K  E  V  K  A  V  A  D  A  L  E  S  R  F  G  Q  A  L  S  S  G  R  L  S  Q  :  I  S  V  I  P  G  C  S  I  L  A  A  V  G  Q  R  M  A  S  S  S  G  V  S  A  T  F  F  S  A  L  A  K  :  A  N  I  N  I  R  A  I  A  Q  G  C  S  E  Y  N  V  T  V  V  V  K  Q  E  D  C  V  R  A  L  R  A  V  H  S  R  F  Y  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0106K23.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24283" stop="24245"/>
                    <exon start="24159" stop="23945"/>
                    <exon start="23822" stop="23735"/>
                    <exon start="23657" stop="23544"/>
                    <exon start="22245" stop="22147"/>
                    <exon start="21416" stop="21300"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>672</number_coding_nucleotides>
                  <number_encoded_amino_acids>224</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILERLSYQEAWEMSYFGANVLHPRTIVPVMQYDIPIIIKNIFNLAAPGTRICRSTDNEFVDGQISESPVKGFATIDKLALVNVEGTGMTGVPGTASDIFGVVKSVGANVIMISQASSEHSICFAVPEKEVKAVADALESRFGQALSSGRLSQISVIPGCSILAAVGQRMASSSGVSATFFSALAKANINIRAIAQGCSEYNVTVVVKQEDCVRALRAVHSRFYL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="58851" PGL_stop="61870"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="58851" e_stop="59079"/>
            <exon e_start="59489" e_stop="59681"/>
            <exon e_start="60267" e_stop="60352"/>
            <exon e_start="60524" e_stop="60655"/>
            <exon e_start="60828" e_stop="60992"/>
            <exon e_start="61298" e_stop="61870"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.944" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.900" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.906" e_score="1.000"/>
          <exon-intron don_prob="0.785" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.506" acc_prob="0.973" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="58851" e_stop="59079" e_length="229"/>
          </exon>
          <intron i_serial="1" don_prob="0.944" acc_prob="0.983">
            <gDNA_intron_boundary i_start="59080" i_stop="59488" i_length="409"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="59489" e_stop="59681" e_length="193"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.900">
            <gDNA_intron_boundary i_start="59682" i_stop="60266" i_length="585"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="60267" e_stop="60352" e_length="86"/>
          </exon>
          <intron i_serial="3" don_prob="0.979" acc_prob="0.906">
            <gDNA_intron_boundary i_start="60353" i_stop="60523" i_length="171"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="60524" e_stop="60655" e_length="132"/>
          </exon>
          <intron i_serial="4" don_prob="0.785" acc_prob="0.991">
            <gDNA_intron_boundary i_start="60656" i_stop="60827" i_length="172"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="60828" e_stop="60992" e_length="165"/>
          </exon>
          <intron i_serial="5" don_prob="0.506" acc_prob="0.973">
            <gDNA_intron_boundary i_start="60993" i_stop="61297" i_length="305"/>
          </intron>
          <exon e_serial="6" e_score="0.998">
            <gDNA_exon_boundary e_start="61298" e_stop="61870" e_length="573"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58851" stop="59079"/>
              <exon start="59489" stop="59681"/>
              <exon start="60267" stop="60352"/>
              <exon start="60524" stop="60655"/>
              <exon start="60828" stop="60992"/>
              <exon start="61298" stop="61870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U322354" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CACCATTCTGCTCTGTTTTTTTTCTTCATCTTGTTGTTAAAAAATGATGGATTTGGTGAATTCAGTGCTTAATTTTGTGGTGCCACCAGCAAGTTTGGTTATGTTGGCTTTTTCATGGCCTGCTTTGTATTTCATCAACACTTGTGAGAGGATGTACAACTCGTTCTTTGGTGAAGACATGGAGGACAAAATCGTCATCATCACTGGAGCTTCTTCTGGTATTGGAGAG : CAAATTGCATATGAATATGCAAAGAAGAAAGCTCATCTGGTTCTGGTTGCACGAAGAGAAACCAGACTCTGGGGAATTAGCGAGAATGCGAGGGCATTAGGTGCAAAAAGTGTTGTTATAACAGCTGCAGATGTTGTCAAGGAAGCTGATTGTAGGAGATTCATTACTGAGACCGTAAACTTATACGGGCGTG : TGGATCATCTTGTAAATACAGCAAGTTTGGGTCATACCTTCTACCTAGAAGAAGCCACAGATACAAATGTCTTCCCCATTTTGATG : GATATCAATTTTTGGGGAAATGTGTATCCTACCTATGTTGCACTACCTTATCTGCGACAAAGCAGAGGCCGAGTCATAGTCAATGCTTCAGTAGAGAGTTGGTTGCCCTTGCCAAGGATGAGCTTATATGCA : GCAGCGAAAGCAGCACTTGTAAATTTTTATGAGACCTTGAGATTCGAGGTGGACGGTGACGTAGGGGTCACAATAGCGACACACGGATGGATTGGGACTGAAATGACAGGTGGAAGATTCATGCTAGAGGAAGGTGCTGAGATGCAGTGGAAGGAAGAAAGAGAA : GTTCATGCATCTGGAAGTTCAGTGGAGGACTTTGCAAAGTTGATTGTATCAGGGGCATGCCGAGGAGATCCATACGTGAAATATCCGAGTTGGTACGACATTTTCCTTCTCTATAGAGTATTCACACCAAATGTTCTCCAATGGACGTTTCGGCTGTTACTTTCAAACCAAAGTGTCCGGAAAACTTCCCTCATTGGCACCGGAAGGCCTCTTCTTGAGTCATCCTCTCCTCCTCGGATGCAGCCTATTCCTGAGACATCCTCTCCTCCACGACAGCCTTCCTCTGAGTCGTCATCTCCTCGAAGACAGCCTCTTTCTGGTTCATCCTCTCCTCAGCATCCATCCGCTTCTCCTCGGAGACGTATGGGGCCTGTTCCTGTTCAGCAGGATTGAAGGAAGTAAGTGAAGTAATCACTTTAATTTAACGTGGTTGTGTTTTTTCTTTAGTCAAGATTTTGTGGATATCATTGTAAGAGTTCACAAGATACAACAAACATTCGGCTCAATAAAAAGTTGTACTTGGCTTGTTTAAGAATGCTTGGGTTTGGTTTTTCAAGGGAAAAAATTTGGGAA</gDNA_template>
            <first_frame> H  H  S  A  L  F  F  F  F  I  L  L  L  K  N  D  G  F  G  E  F  S  A  *  F  C  G  A  T  S  K  F  G  Y  V  G  F  F  M  A  C  F  V  F  H  Q  H  L  *  E  D  V  Q  L  V  L  W  *  R  H  G  G  Q  N  R  H  H  H  W  S  F  F  W  Y  W  R   : A  N  C  I  *  I  C  K  E  E  S  S  S  G  S  G  C  T  K  R  N  Q  T  L  G  N  *  R  E  C  E  G  I  R  C  K  K  C  C  Y  N  S  C  R  C  C  Q  G  S  *  L  *  E  I  H  Y  *  D  R  K  L  I  R  A  C :   G  S  S  C  K  Y  S  K  F  G  S  Y  L  L  P  R  R  S  H  R  Y  K  C  L  P  H  F  D   : G  Y  Q  F  L  G  K  C  V  S  Y  L  C  C  T  T  L  S  A  T  K  Q  R  P  S  H  S  Q  C  F  S  R  E  L  V  A  L  A  K  D  E  L  I  C   : S  S  E  S  S  T  C  K  F  L  *  D  L  E  I  R  G  G  R  *  R  R  G  H  N  S  D  T  R  M  D  W  D  *  N  D  R  W  K  I  H  A  R  G  R  C  *  D  A  V  E  G  R  K  R   : S  S  C  I  W  K  F  S  G  G  L  C  K  V  D  C  I  R  G  M  P  R  R  S  I  R  E  I  S  E  L  V  R  H  F  P  S  L  *  S  I  H  T  K  C  S  P  M  D  V  S  A  V  T  F  K  P  K  C  P  E  N  F  P  H  W  H  R  K  A  S  S  *  V  I  L  S  S  S  D  A  A  Y  S  *  D  I  L  S  S  T  T  A  F  L  *  V  V  I  S  S  K  T  A  S  F  W  F  I  L  S  S  A  S  I  R  F  S  S  E  T  Y  G  A  C  S  C  S  A  G  L  K  E  V  S  E  V  I  T  L  I  *  R  G  C  V  F  S  L  V  K  I  L  W  I  S  L  *  E  F  T  R  Y  N  K  H  S  A  Q  *  K  V  V  L  G  L  F  K  N  A  W  V  W  F  F  K  G  K  N  L  G  </first_frame>
            <second_frame>  T  I  L  L  C  F  F  S  S  S  C  C  *  K  M  M  D  L  V  N  S  V  L  N  F  V  V  P  P  A  S  L  V  M  L  A  F  S  W  P  A  L  Y  F  I  N  T  C  E  R  M  Y  N  S  F  F  G  E  D  M  E  D  K  I  V  I  I  T  G  A  S  S  G  I  G  E  :  Q  I  A  Y  E  Y  A  K  K  K  A  H  L  V  L  V  A  R  R  E  T  R  L  W  G  I  S  E  N  A  R  A  L  G  A  K  S  V  V  I  T  A  A  D  V  V  K  E  A  D  C  R  R  F  I  T  E  T  V  N  L  Y  G  R   : V  D  H  L  V  N  T  A  S  L  G  H  T  F  Y  L  E  E  A  T  D  T  N  V  F  P  I  L  M  :  D  I  N  F  W  G  N  V  Y  P  T  Y  V  A  L  P  Y  L  R  Q  S  R  G  R  V  I  V  N  A  S  V  E  S  W  L  P  L  P  R  M  S  L  Y  A  :  A  A  K  A  A  L  V  N  F  Y  E  T  L  R  F  E  V  D  G  D  V  G  V  T  I  A  T  H  G  W  I  G  T  E  M  T  G  G  R  F  M  L  E  E  G  A  E  M  Q  W  K  E  E  R  E  :  V  H  A  S  G  S  S  V  E  D  F  A  K  L  I  V  S  G  A  C  R  G  D  P  Y  V  K  Y  P  S  W  Y  D  I  F  L  L  Y  R  V  F  T  P  N  V  L  Q  W  T  F  R  L  L  L  S  N  Q  S  V  R  K  T  S  L  I  G  T  G  R  P  L  L  E  S  S  S  P  P  R  M  Q  P  I  P  E  T  S  S  P  P  R  Q  P  S  S  E  S  S  S  P  R  R  Q  P  L  S  G  S  S  S  P  Q  H  P  S  A  S  P  R  R  R  M  G  P  V  P  V  Q  Q  D  *  R  K  *  V  K  *  S  L  *  F  N  V  V  V  F  F  L  *  S  R  F  C  G  Y  H  C  K  S  S  Q  D  T  T  N  I  R  L  N  K  K  L  Y  L  A  C  L  R  M  L  G  F  G  F  S  R  E  K  I  W  E </second_frame>
            <third_frame>   P  F  C  S  V  F  F  L  H  L  V  V  K  K  *  W  I  W  *  I  Q  C  L  I  L  W  C  H  Q  Q  V  W  L  C  W  L  F  H  G  L  L  C  I  S  S  T  L  V  R  G  C  T  T  R  S  L  V  K  T  W  R  T  K  S  S  S  S  L  E  L  L  L  V  L  E  S :   K  L  H  M  N  M  Q  R  R  K  L  I  W  F  W  L  H  E  E  K  P  D  S  G  E  L  A  R  M  R  G  H  *  V  Q  K  V  L  L  *  Q  L  Q  M  L  S  R  K  L  I  V  G  D  S  L  L  R  P  *  T  Y  T  G  V  :  W  I  I  L  *  I  Q  Q  V  W  V  I  P  S  T  *  K  K  P  Q  I  Q  M  S  S  P  F  *  W :   I  S  I  F  G  E  M  C  I  L  P  M  L  H  Y  L  I  C  D  K  A  E  A  E  S  *  S  M  L  Q  *  R  V  G  C  P  C  Q  G  *  A  Y  M  Q :   Q  R  K  Q  H  L  *  I  F  M  R  P  *  D  S  R  W  T  V  T  *  G  S  Q  *  R  H  T  D  G  L  G  L  K  *  Q  V  E  D  S  C  *  R  K  V  L  R  C  S  G  R  K  K  E  K :   F  M  H  L  E  V  Q  W  R  T  L  Q  S  *  L  Y  Q  G  H  A  E  E  I  H  T  *  N  I  R  V  G  T  T  F  S  F  S  I  E  Y  S  H  Q  M  F  S  N  G  R  F  G  C  Y  F  Q  T  K  V  S  G  K  L  P  S  L  A  P  E  G  L  F  L  S  H  P  L  L  L  G  C  S  L  F  L  R  H  P  L  L  H  D  S  L  P  L  S  R  H  L  L  E  D  S  L  F  L  V  H  P  L  L  S  I  H  P  L  L  L  G  D  V  W  G  L  F  L  F  S  R  I  E  G  S  K  *  S  N  H  F  N  L  T  W  L  C  F  F  F  S  Q  D  F  V  D  I  I  V  R  V  H  K  I  Q  Q  T  F  G  S  I  K  S  C  T  W  L  V  *  E  C  L  G  L  V  F  Q  G  K  K  F  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0106K23.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58891" stop="59079"/>
                    <exon start="59489" stop="59681"/>
                    <exon start="60267" stop="60352"/>
                    <exon start="60524" stop="60655"/>
                    <exon start="60828" stop="60992"/>
                    <exon start="61298" stop="61690"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1155</number_coding_nucleotides>
                  <number_encoded_amino_acids>385</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KMMDLVNSVLNFVVPPASLVMLAFSWPALYFINTCERMYNSFFGEDMEDKIVIITGASSGIGEQIAYEYAKKKAHLVLVARRETRLWGISENARALGAKSVVITAADVVKEADCRRFITETVNLYGRVDHLVNTASLGHTFYLEEATDTNVFPILMDINFWGNVYPTYVALPYLRQSRGRVIVNASVESWLPLPRMSLYAAAKAALVNFYETLRFEVDGDVGVTIATHGWIGTEMTGGRFMLEEGAEMQWKEEREVHASGSSVEDFAKLIVSGACRGDPYVKYPSWYDIFLLYRVFTPNVLQWTFRLLLSNQSVRKTSLIGTGRPLLESSSPPRMQPIPETSSPPRQPSSESSSPRRQPLSGSSSPQHPSASPRRRMGPVPVQQD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="76421" PGL_stop="62256"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="76421" e_stop="76110"/>
            <exon e_start="75058" e_stop="74951"/>
            <exon e_start="73932" e_stop="73906"/>
            <exon e_start="71925" e_stop="71835"/>
            <exon e_start="70670" e_stop="70627"/>
            <exon e_start="69327" e_stop="69229"/>
            <exon e_start="67733" e_stop="67676"/>
            <exon e_start="67584" e_stop="67532"/>
            <exon e_start="67046" e_stop="66945"/>
            <exon e_start="66121" e_stop="66052"/>
            <exon e_start="64294" e_stop="64220"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.807" e_score="1.000"/>
          <exon-intron don_prob="0.947" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.582" acc_prob="0.941" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.970" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.900" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.935" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.882" e_score="0.990"/>
          <exon-intron don_prob="0.983" acc_prob="0.994" e_score="0.986"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="76421" e_stop="76110" e_length="312"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.807">
            <gDNA_intron_boundary i_start="76109" i_stop="75059" i_length="1051"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="75058" e_stop="74951" e_length="108"/>
          </exon>
          <intron i_serial="2" don_prob="0.947" acc_prob="0.998">
            <gDNA_intron_boundary i_start="74950" i_stop="73933" i_length="1018"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="73932" e_stop="73906" e_length="27"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.995">
            <gDNA_intron_boundary i_start="73905" i_stop="71926" i_length="1980"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="71925" e_stop="71835" e_length="91"/>
          </exon>
          <intron i_serial="4" don_prob="0.582" acc_prob="0.941">
            <gDNA_intron_boundary i_start="71834" i_stop="70671" i_length="1164"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="70670" e_stop="70627" e_length="44"/>
          </exon>
          <intron i_serial="5" don_prob="0.973" acc_prob="0.970">
            <gDNA_intron_boundary i_start="70626" i_stop="69328" i_length="1299"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="69327" e_stop="69229" e_length="99"/>
          </exon>
          <intron i_serial="6" don_prob="0.996" acc_prob="0.900">
            <gDNA_intron_boundary i_start="69228" i_stop="67734" i_length="1495"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="67733" e_stop="67676" e_length="58"/>
          </exon>
          <intron i_serial="7" don_prob="0.991" acc_prob="1.000">
            <gDNA_intron_boundary i_start="67675" i_stop="67585" i_length="91"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="67584" e_stop="67532" e_length="53"/>
          </exon>
          <intron i_serial="8" don_prob="0.935" acc_prob="0.997">
            <gDNA_intron_boundary i_start="67531" i_stop="67047" i_length="485"/>
          </intron>
          <exon e_serial="9" e_score="0.990">
            <gDNA_exon_boundary e_start="67046" e_stop="66945" e_length="102"/>
          </exon>
          <intron i_serial="9" don_prob="0.996" acc_prob="0.882">
            <gDNA_intron_boundary i_start="66944" i_stop="66122" i_length="823"/>
          </intron>
          <exon e_serial="10" e_score="0.986">
            <gDNA_exon_boundary e_start="66121" e_stop="66052" e_length="70"/>
          </exon>
          <intron i_serial="10" don_prob="0.983" acc_prob="0.994">
            <gDNA_intron_boundary i_start="66051" i_stop="64295" i_length="1757"/>
          </intron>
          <exon e_serial="11" e_score="0.987">
            <gDNA_exon_boundary e_start="64294" e_stop="64220" e_length="75"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76421" stop="76110"/>
              <exon start="75058" stop="74951"/>
              <exon start="73932" stop="73906"/>
              <exon start="71925" stop="71835"/>
              <exon start="70670" stop="70627"/>
              <exon start="69327" stop="69229"/>
              <exon start="67733" stop="67676"/>
              <exon start="67584" stop="67532"/>
              <exon start="67046" stop="66945"/>
              <exon start="66121" stop="66052"/>
              <exon start="64294" stop="64220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U321240" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAGGAGGGGGAAAAAGTCTGCGTGTTCGACAGGGAAAAGGGAGCTCTCCACCTTCTCCTCGGTCTCTCCGTCGCATTATCTATTTATCAAGTTTGTCTTTTTCATATTTCTTTTTACCTGTACAAGTTGATTGGAGGAGGAATTTTGGGTGGTTTTCTTCACCGATCTCTTCTCCAAGAAATGTCGGCTATTTCGAATTTCACGGCGTGCCGGCGTTTCCAAAATGGAGCTGCATTAACAAAAGACTCACCTGGGGTTGGTTTGATTACTAACAAGTTTCTGGCGACCAAGATTTCTACGCCATTCCACAAG : GTGTCTCTCGTATGTTCAAAAAGGACGTTTAAAGGTTCAAATATAAGAATGACAATGTTAGATGACAAACTTTCCAGCGGGAAGGTTGTTGTGCCATCTGAAGTGCTG : GCATATGAGCTCGTTCAAGGAGCAAAA : GTAAAATGGAGTTATATTATGGAGGGATCGTTGCCTGAACCACCGACTGCTGTTCTCTTGCATGGTATTCTTGGCAGCAGGAAAAACTGGG : GAAGCTTTGCTAGGAGATTGGCCCAAGAATTTCCGAAATGGCAG : TTTCTCCTGGTGGACTTGCGGTGCCATGGTGATTCAGCATCCCTCAAGAAGAGAGGCACACATACAGTCGCGTCAGCTGCTCTTGATGTCCTAAAGCTG : CTTGGCCAGCTCAGACTGACTCCCCGAGTTGTAGTTGGTCACAGCTTTGGAGGAAAAG : TTGCATTGAGCATGGTTGAGCAGGTTCCAAAGCCCCTTGCACGGCCTGTTAGA : GTCTGGGTTCTAGATGCCACTCCAGGAGAGGTTCGAGCTGGTGCAGATGGAGATGATCATCCAGCTGAATTGATATCATTTCTGAGTAAATTACCAAAAGAG : GAAGGTCTCTTCAAAACGAGATATTGTGGATGCTCTGATACAAGAAGGTTTTTCCAGGGATGTAGCACAG : TGGGTGGTAACTAACCTTCGTCAAACCAACACTGCTGGTTCATCTCCTTCACCTTTGTCATGGGTGTTTGATCTC</gDNA_template>
            <first_frame> *  E  G  E  K  V  C  V  F  D  R  E  K  G  A  L  H  L  L  L  G  L  S  V  A  L  S  I  Y  Q  V  C  L  F  H  I  S  F  Y  L  Y  K  L  I  G  G  G  I  L  G  G  F  L  H  R  S  L  L  Q  E  M  S  A  I  S  N  F  T  A  C  R  R  F  Q  N  G  A  A  L  T  K  D  S  P  G  V  G  L  I  T  N  K  F  L  A  T  K  I  S  T  P  F  H  K  :  V  S  L  V  C  S  K  R  T  F  K  G  S  N  I  R  M  T  M  L  D  D  K  L  S  S  G  K  V  V  V  P  S  E  V  L  :  A  Y  E  L  V  Q  G  A  K  :  V  K  W  S  Y  I  M  E  G  S  L  P  E  P  P  T  A  V  L  L  H  G  I  L  G  S  R  K  N  W   : G  S  F  A  R  R  L  A  Q  E  F  P  K  W  Q  :  F  L  L  V  D  L  R  C  H  G  D  S  A  S  L  K  K  R  G  T  H  T  V  A  S  A  A  L  D  V  L  K  L  :  L  G  Q  L  R  L  T  P  R  V  V  V  G  H  S  F  G  G  K   : V  A  L  S  M  V  E  Q  V  P  K  P  L  A  R  P  V  R  :  V  W  V  L  D  A  T  P  G  E  V  R  A  G  A  D  G  D  D  H  P  A  E  L  I  S  F  L  S  K  L  P  K  E  :  E  G  L  F  K  T  R  Y  C  G  C  S  D  T  R  R  F  F  Q  G  C  S  T   : V  G  G  N  *  P  S  S  N  Q  H  C  W  F  I  S  F  T  F  V  M  G  V  *  S  </first_frame>
            <second_frame>  R  R  G  K  K  S  A  C  S  T  G  K  R  E  L  S  T  F  S  S  V  S  P  S  H  Y  L  F  I  K  F  V  F  F  I  F  L  F  T  C  T  S  *  L  E  E  E  F  W  V  V  F  F  T  D  L  F  S  K  K  C  R  L  F  R  I  S  R  R  A  G  V  S  K  M  E  L  H  *  Q  K  T  H  L  G  L  V  *  L  L  T  S  F  W  R  P  R  F  L  R  H  S  T  R :   C  L  S  Y  V  Q  K  G  R  L  K  V  Q  I  *  E  *  Q  C  *  M  T  N  F  P  A  G  R  L  L  C  H  L  K  C  W :   H  M  S  S  F  K  E  Q  K :   *  N  G  V  I  L  W  R  D  R  C  L  N  H  R  L  L  F  S  C  M  V  F  L  A  A  G  K  T  G  :  E  A  L  L  G  D  W  P  K  N  F  R  N  G  S :   F  S  W  W  T  C  G  A  M  V  I  Q  H  P  S  R  R  E  A  H  I  Q  S  R  Q  L  L  L  M  S  *  S  C :   L  A  S  S  D  *  L  P  E  L  *  L  V  T  A  L  E  E  K  :  L  H  *  A  W  L  S  R  F  Q  S  P  L  H  G  L  L  E :   S  G  F  *  M  P  L  Q  E  R  F  E  L  V  Q  M  E  M  I  I  Q  L  N  *  Y  H  F  *  V  N  Y  Q  K  R :   K  V  S  S  K  R  D  I  V  D  A  L  I  Q  E  G  F  S  R  D  V  A  Q  :  W  V  V  T  N  L  R  Q  T  N  T  A  G  S  S  P  S  P  L  S  W  V  F  D  L </second_frame>
            <third_frame>   G  G  G  K  S  L  R  V  R  Q  G  K  G  S  S  P  P  S  P  R  S  L  R  R  I  I  Y  L  S  S  L  S  F  S  Y  F  F  L  P  V  Q  V  D  W  R  R  N  F  G  W  F  S  S  P  I  S  S  P  R  N  V  G  Y  F  E  F  H  G  V  P  A  F  P  K  W  S  C  I  N  K  R  L  T  W  G  W  F  D  Y  *  Q  V  S  G  D  Q  D  F  Y  A  I  P  Q   : G  V  S  R  M  F  K  K  D  V  *  R  F  K  Y  K  N  D  N  V  R  *  Q  T  F  Q  R  E  G  C  C  A  I  *  S  A   : G  I  *  A  R  S  R  S  K   : S  K  M  E  L  Y  Y  G  G  I  V  A  *  T  T  D  C  C  S  L  A  W  Y  S  W  Q  Q  E  K  L  G :   K  L  C  *  E  I  G  P  R  I  S  E  M  A   : V  S  P  G  G  L  A  V  P  W  *  F  S  I  P  Q  E  E  R  H  T  Y  S  R  V  S  C  S  *  C  P  K  A   : A  W  P  A  Q  T  D  S  P  S  C  S  W  S  Q  L  W  R  K  S :   C  I  E  H  G  *  A  G  S  K  A  P  C  T  A  C  *   : S  L  G  S  R  C  H  S  R  R  G  S  S  W  C  R  W  R  *  S  S  S  *  I  D  I  I  S  E  *  I  T  K  R   : G  R  S  L  Q  N  E  I  L  W  M  L  *  Y  K  K  V  F  P  G  M  *  H  S :   G  W  *  L  T  F  V  K  P  T  L  L  V  H  L  L  H  L  C  H  G  C  L  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0106K23.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76418" stop="76110"/>
                    <exon start="75058" stop="74951"/>
                    <exon start="73932" stop="73906"/>
                    <exon start="71925" stop="71835"/>
                    <exon start="70670" stop="70627"/>
                    <exon start="69327" stop="69229"/>
                    <exon start="67733" stop="67676"/>
                    <exon start="67584" stop="67532"/>
                    <exon start="67046" stop="66945"/>
                    <exon start="66121" stop="66052"/>
                    <exon start="64294" stop="64281"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>972</number_coding_nucleotides>
                  <number_encoded_amino_acids>324</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EGEKVCVFDREKGALHLLLGLSVALSIYQVCLFHISFYLYKLIGGGILGGFLHRSLLQEMSAISNFTACRRFQNGAALTKDSPGVGLITNKFLATKISTPFHKVSLVCSKRTFKGSNIRMTMLDDKLSSGKVVVPSEVLAYELVQGAKVKWSYIMEGSLPEPPTAVLLHGILGSRKNWGSFARRLAQEFPKWQFLLVDLRCHGDSASLKKRGTHTVASAALDVLKLLGQLRLTPRVVVGHSFGGKVALSMVEQVPKPLARPVRVWVLDATPGEVRAGADGDDHPAELISFLSKLPKEEGLFKTRYCGCSDTRRFFQGCSTVGGN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="76397" e_stop="76110"/>
            <exon e_start="75058" e_stop="74951"/>
            <exon e_start="73932" e_stop="73906"/>
            <exon e_start="71925" e_stop="71835"/>
            <exon e_start="70670" e_stop="70627"/>
            <exon e_start="69327" e_stop="69229"/>
            <exon e_start="67733" e_stop="67676"/>
            <exon e_start="67584" e_stop="67532"/>
            <exon e_start="67046" e_stop="66945"/>
            <exon e_start="66117" e_stop="66052"/>
            <exon e_start="64294" e_stop="64173"/>
            <exon e_start="63515" e_stop="63344"/>
            <exon e_start="62632" e_stop="62256"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.807" e_score="1.000"/>
          <exon-intron don_prob="0.947" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.582" acc_prob="0.941" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.970" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.900" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.935" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.097" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.674" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.977" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="76397" e_stop="76110" e_length="288"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.807">
            <gDNA_intron_boundary i_start="76109" i_stop="75059" i_length="1051"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="75058" e_stop="74951" e_length="108"/>
          </exon>
          <intron i_serial="2" don_prob="0.947" acc_prob="0.998">
            <gDNA_intron_boundary i_start="74950" i_stop="73933" i_length="1018"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="73932" e_stop="73906" e_length="27"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.995">
            <gDNA_intron_boundary i_start="73905" i_stop="71926" i_length="1980"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="71925" e_stop="71835" e_length="91"/>
          </exon>
          <intron i_serial="4" don_prob="0.582" acc_prob="0.941">
            <gDNA_intron_boundary i_start="71834" i_stop="70671" i_length="1164"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="70670" e_stop="70627" e_length="44"/>
          </exon>
          <intron i_serial="5" don_prob="0.973" acc_prob="0.970">
            <gDNA_intron_boundary i_start="70626" i_stop="69328" i_length="1299"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="69327" e_stop="69229" e_length="99"/>
          </exon>
          <intron i_serial="6" don_prob="0.996" acc_prob="0.900">
            <gDNA_intron_boundary i_start="69228" i_stop="67734" i_length="1495"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="67733" e_stop="67676" e_length="58"/>
          </exon>
          <intron i_serial="7" don_prob="0.991" acc_prob="1.000">
            <gDNA_intron_boundary i_start="67675" i_stop="67585" i_length="91"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="67584" e_stop="67532" e_length="53"/>
          </exon>
          <intron i_serial="8" don_prob="0.935" acc_prob="0.997">
            <gDNA_intron_boundary i_start="67531" i_stop="67047" i_length="485"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="67046" e_stop="66945" e_length="102"/>
          </exon>
          <intron i_serial="9" don_prob="0.996" acc_prob="0.097">
            <gDNA_intron_boundary i_start="66944" i_stop="66118" i_length="827"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="66117" e_stop="66052" e_length="66"/>
          </exon>
          <intron i_serial="10" don_prob="0.983" acc_prob="0.994">
            <gDNA_intron_boundary i_start="66051" i_stop="64295" i_length="1757"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="64294" e_stop="64173" e_length="122"/>
          </exon>
          <intron i_serial="11" don_prob="0.674" acc_prob="0.000">
            <gDNA_intron_boundary i_start="64172" i_stop="63516" i_length="657"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="63515" e_stop="63344" e_length="172"/>
          </exon>
          <intron i_serial="12" don_prob="1.000" acc_prob="0.977">
            <gDNA_intron_boundary i_start="63343" i_stop="62633" i_length="711"/>
          </intron>
          <exon e_serial="13" e_score="0.997">
            <gDNA_exon_boundary e_start="62632" e_stop="62256" e_length="377"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76397" stop="76110"/>
              <exon start="75058" stop="74951"/>
              <exon start="73932" stop="73906"/>
              <exon start="71925" stop="71835"/>
              <exon start="70670" stop="70627"/>
              <exon start="69327" stop="69229"/>
              <exon start="67733" stop="67676"/>
              <exon start="67584" stop="67532"/>
              <exon start="67046" stop="66945"/>
              <exon start="66117" stop="66052"/>
              <exon start="64294" stop="64173"/>
              <exon start="63515" stop="63344"/>
              <exon start="62632" stop="62256"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U321239" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCGACAGGGAAAAGGGAGCTCTCCACCTTCTCCTCGGTCTCTCCGTCGCATTATCTATTTATCAAGTTTGTCTTTTTCATATTTCTTTTTACCTGTACAAGTTGATTGGAGGAGGAATTTTGGGTGGTTTTCTTCACCGATCTCTTCTCCAAGAAATGTCGGCTATTTCGAATTTCACGGCGTGCCGGCGTTTCCAAAATGGAGCTGCATTAACAAAAGACTCACCTGGGGTTGGTTTGATTACTAACAAGTTTCTGGCGACCAAGATTTCTACGCCATTCCACAAG : GTGTCTCTCGTATGTTCAAAAAGGACGTTTAAAGGTTCAAATATAAGAATGACAATGTTAGATGACAAACTTTCCAGCGGGAAGGTTGTTGTGCCATCTGAAGTGCTG : GCATATGAGCTCGTTCAAGGAGCAAAA : GTAAAATGGAGTTATATTATGGAGGGATCGTTGCCTGAACCACCGACTGCTGTTCTCTTGCATGGTATTCTTGGCAGCAGGAAAAACTGGG : GAAGCTTTGCTAGGAGATTGGCCCAAGAATTTCCGAAATGGCAG : TTTCTCCTGGTGGACTTGCGGTGCCATGGTGATTCAGCATCCCTCAAGAAGAGAGGCACACATACAGTCGCGTCAGCTGCTCTTGATGTCCTAAAGCTG : CTTGGCCAGCTCAGACTGACTCCCCGAGTTGTAGTTGGTCACAGCTTTGGAGGAAAAG : TTGCATTGAGCATGGTTGAGCAGGTTCCAAAGCCCCTTGCACGGCCTGTTAGA : GTCTGGGTTCTAGATGCCACTCCAGGAGAGGTTCGAGCTGGTGCAGATGGAGATGATCATCCAGCTGAATTGATATCATTTCTGAGTAAATTACCAAAAGAG : GTCTCTTCAAAACGAGATATTGTGGATGCTCTGATACAAGAAGGTTTTTCCAGGGATGTAGCACAG : TGGGTGGTAACTAACCTTCGTCAAACCAACACTGCTGGTTCATCTCCTTCACCTTTGTCATGGGTGTTTGATCTCAAAGGTATTGCTGAAATGTATCAATCATATGAAGAAACAAATCTGTG : GAAAATTGTGGAGGATGTTCCTCGGGGCGTGCATGTTAACTTTTTGAAAGCAGAAAGAAGTTTGCATAGATGGGCTCTTGAGGATATTAGAAGAATCCATGTTGCTGAGGAACAGGCTGTAGAGGAAGGAGGTGGAGTCGAAATGCATGTCCTCGAAGATGCAGGTCATTGG : GTACATGCTGATAACCCAGATGGGCTATTCAAGATCCTTTCATTTTCCTTCCAAGGATTTTAGGCCCAAGGAATTCTGGCATTGACCCTATGACCTGAATATAGGTTGTGAACCCCTTGCAACCTATAAGATTGCAGAAAGATCCAATTCTTTTTGTAGTATAGTGTATATCATCTCATTCATTATGATTTGCTCGTTCTAGAATGTGATGTGCAGAAATTAGTTTGGTGGGGCTGTTTCACCTTTAAAGCTGAGTACACGATACAGAATTGTGCAAAGAACTTATTTACAAGTTATGTCCTGATGGATCATTAAACACCAGCTTTACTGGGTAATGTAAGCTCATTTATCTTCTTCAAATGAATATGATTCTACCA</gDNA_template>
            <first_frame> F  D  R  E  K  G  A  L  H  L  L  L  G  L  S  V  A  L  S  I  Y  Q  V  C  L  F  H  I  S  F  Y  L  Y  K  L  I  G  G  G  I  L  G  G  F  L  H  R  S  L  L  Q  E  M  S  A  I  S  N  F  T  A  C  R  R  F  Q  N  G  A  A  L  T  K  D  S  P  G  V  G  L  I  T  N  K  F  L  A  T  K  I  S  T  P  F  H  K  :  V  S  L  V  C  S  K  R  T  F  K  G  S  N  I  R  M  T  M  L  D  D  K  L  S  S  G  K  V  V  V  P  S  E  V  L  :  A  Y  E  L  V  Q  G  A  K  :  V  K  W  S  Y  I  M  E  G  S  L  P  E  P  P  T  A  V  L  L  H  G  I  L  G  S  R  K  N  W   : G  S  F  A  R  R  L  A  Q  E  F  P  K  W  Q  :  F  L  L  V  D  L  R  C  H  G  D  S  A  S  L  K  K  R  G  T  H  T  V  A  S  A  A  L  D  V  L  K  L  :  L  G  Q  L  R  L  T  P  R  V  V  V  G  H  S  F  G  G  K   : V  A  L  S  M  V  E  Q  V  P  K  P  L  A  R  P  V  R  :  V  W  V  L  D  A  T  P  G  E  V  R  A  G  A  D  G  D  D  H  P  A  E  L  I  S  F  L  S  K  L  P  K  E  :  V  S  S  K  R  D  I  V  D  A  L  I  Q  E  G  F  S  R  D  V  A  Q  :  W  V  V  T  N  L  R  Q  T  N  T  A  G  S  S  P  S  P  L  S  W  V  F  D  L  K  G  I  A  E  M  Y  Q  S  Y  E  E  T  N  L  W :   K  I  V  E  D  V  P  R  G  V  H  V  N  F  L  K  A  E  R  S  L  H  R  W  A  L  E  D  I  R  R  I  H  V  A  E  E  Q  A  V  E  E  G  G  G  V  E  M  H  V  L  E  D  A  G  H  W  :  V  H  A  D  N  P  D  G  L  F  K  I  L  S  F  S  F  Q  G  F  *  A  Q  G  I  L  A  L  T  L  *  P  E  Y  R  L  *  T  P  C  N  L  *  D  C  R  K  I  Q  F  F  L  *  Y  S  V  Y  H  L  I  H  Y  D  L  L  V  L  E  C  D  V  Q  K  L  V  W  W  G  C  F  T  F  K  A  E  Y  T  I  Q  N  C  A  K  N  L  F  T  S  Y  V  L  M  D  H  *  T  P  A  L  L  G  N  V  S  S  F  I  F  F  K  *  I  *  F  Y   </first_frame>
            <second_frame>  S  T  G  K  R  E  L  S  T  F  S  S  V  S  P  S  H  Y  L  F  I  K  F  V  F  F  I  F  L  F  T  C  T  S  *  L  E  E  E  F  W  V  V  F  F  T  D  L  F  S  K  K  C  R  L  F  R  I  S  R  R  A  G  V  S  K  M  E  L  H  *  Q  K  T  H  L  G  L  V  *  L  L  T  S  F  W  R  P  R  F  L  R  H  S  T  R :   C  L  S  Y  V  Q  K  G  R  L  K  V  Q  I  *  E  *  Q  C  *  M  T  N  F  P  A  G  R  L  L  C  H  L  K  C  W :   H  M  S  S  F  K  E  Q  K :   *  N  G  V  I  L  W  R  D  R  C  L  N  H  R  L  L  F  S  C  M  V  F  L  A  A  G  K  T  G  :  E  A  L  L  G  D  W  P  K  N  F  R  N  G  S :   F  S  W  W  T  C  G  A  M  V  I  Q  H  P  S  R  R  E  A  H  I  Q  S  R  Q  L  L  L  M  S  *  S  C :   L  A  S  S  D  *  L  P  E  L  *  L  V  T  A  L  E  E  K  :  L  H  *  A  W  L  S  R  F  Q  S  P  L  H  G  L  L  E :   S  G  F  *  M  P  L  Q  E  R  F  E  L  V  Q  M  E  M  I  I  Q  L  N  *  Y  H  F  *  V  N  Y  Q  K  R :   S  L  Q  N  E  I  L  W  M  L  *  Y  K  K  V  F  P  G  M  *  H  S :   G  W  *  L  T  F  V  K  P  T  L  L  V  H  L  L  H  L  C  H  G  C  L  I  S  K  V  L  L  K  C  I  N  H  M  K  K  Q  I  C   : G  K  L  W  R  M  F  L  G  A  C  M  L  T  F  *  K  Q  K  E  V  C  I  D  G  L  L  R  I  L  E  E  S  M  L  L  R  N  R  L  *  R  K  E  V  E  S  K  C  M  S  S  K  M  Q  V  I  G :   Y  M  L  I  T  Q  M  G  Y  S  R  S  F  H  F  P  S  K  D  F  R  P  K  E  F  W  H  *  P  Y  D  L  N  I  G  C  E  P  L  A  T  Y  K  I  A  E  R  S  N  S  F  C  S  I  V  Y  I  I  S  F  I  M  I  C  S  F  *  N  V  M  C  R  N  *  F  G  G  A  V  S  P  L  K  L  S  T  R  Y  R  I  V  Q  R  T  Y  L  Q  V  M  S  *  W  I  I  K  H  Q  L  Y  W  V  M  *  A  H  L  S  S  S  N  E  Y  D  S  T  </second_frame>
            <third_frame>   R  Q  G  K  G  S  S  P  P  S  P  R  S  L  R  R  I  I  Y  L  S  S  L  S  F  S  Y  F  F  L  P  V  Q  V  D  W  R  R  N  F  G  W  F  S  S  P  I  S  S  P  R  N  V  G  Y  F  E  F  H  G  V  P  A  F  P  K  W  S  C  I  N  K  R  L  T  W  G  W  F  D  Y  *  Q  V  S  G  D  Q  D  F  Y  A  I  P  Q   : G  V  S  R  M  F  K  K  D  V  *  R  F  K  Y  K  N  D  N  V  R  *  Q  T  F  Q  R  E  G  C  C  A  I  *  S  A   : G  I  *  A  R  S  R  S  K   : S  K  M  E  L  Y  Y  G  G  I  V  A  *  T  T  D  C  C  S  L  A  W  Y  S  W  Q  Q  E  K  L  G :   K  L  C  *  E  I  G  P  R  I  S  E  M  A   : V  S  P  G  G  L  A  V  P  W  *  F  S  I  P  Q  E  E  R  H  T  Y  S  R  V  S  C  S  *  C  P  K  A   : A  W  P  A  Q  T  D  S  P  S  C  S  W  S  Q  L  W  R  K  S :   C  I  E  H  G  *  A  G  S  K  A  P  C  T  A  C  *   : S  L  G  S  R  C  H  S  R  R  G  S  S  W  C  R  W  R  *  S  S  S  *  I  D  I  I  S  E  *  I  T  K  R   : G  L  F  K  T  R  Y  C  G  C  S  D  T  R  R  F  F  Q  G  C  S  T   : V  G  G  N  *  P  S  S  N  Q  H  C  W  F  I  S  F  T  F  V  M  G  V  *  S  Q  R  Y  C  *  N  V  S  I  I  *  R  N  K  S  V  :  E  N  C  G  G  C  S  S  G  R  A  C  *  L  F  E  S  R  K  K  F  A  *  M  G  S  *  G  Y  *  K  N  P  C  C  *  G  T  G  C  R  G  R  R  W  S  R  N  A  C  P  R  R  C  R  S  L   : G  T  C  *  *  P  R  W  A  I  Q  D  P  F  I  F  L  P  R  I  L  G  P  R  N  S  G  I  D  P  M  T  *  I  *  V  V  N  P  L  Q  P  I  R  L  Q  K  D  P  I  L  F  V  V  *  C  I  S  S  H  S  L  *  F  A  R  S  R  M  *  C  A  E  I  S  L  V  G  L  F  H  L  *  S  *  V  H  D  T  E  L  C  K  E  L  I  Y  K  L  C  P  D  G  S  L  N  T  S  F  T  G  *  C  K  L  I  Y  L  L  Q  M  N  M  I  L  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0106K23.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76397" stop="76110"/>
                    <exon start="75058" stop="74951"/>
                    <exon start="73932" stop="73906"/>
                    <exon start="71925" stop="71835"/>
                    <exon start="70670" stop="70627"/>
                    <exon start="69327" stop="69229"/>
                    <exon start="67733" stop="67676"/>
                    <exon start="67584" stop="67532"/>
                    <exon start="67046" stop="66945"/>
                    <exon start="66117" stop="66052"/>
                    <exon start="64294" stop="64173"/>
                    <exon start="63515" stop="63344"/>
                    <exon start="62632" stop="62570"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1290</number_coding_nucleotides>
                  <number_encoded_amino_acids>430</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FDREKGALHLLLGLSVALSIYQVCLFHISFYLYKLIGGGILGGFLHRSLLQEMSAISNFTACRRFQNGAALTKDSPGVGLITNKFLATKISTPFHKVSLVCSKRTFKGSNIRMTMLDDKLSSGKVVVPSEVLAYELVQGAKVKWSYIMEGSLPEPPTAVLLHGILGSRKNWGSFARRLAQEFPKWQFLLVDLRCHGDSASLKKRGTHTVASAALDVLKLLGQLRLTPRVVVGHSFGGKVALSMVEQVPKPLARPVRVWVLDATPGEVRAGADGDDHPAELISFLSKLPKEVSSKRDIVDALIQEGFSRDVAQWVVTNLRQTNTAGSSPSPLSWVFDLKGIAEMYQSYEETNLWKIVEDVPRGVHVNFLKAERSLHRWALEDIRRIHVAEEQAVEEGGGVEMHVLEDAGHWVHADNPDGLFKILSFSFQGF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="77750" PGL_stop="78213"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="77750" e_stop="78213"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="77750" e_stop="78213" e_length="464"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77750" stop="78213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U343738" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TATAACTTATATCATTTGGTCATTTGGTGTATTTCGGAGGAGGAATCTTCTTCAAATTTCAAGTTTCGACATCAATATTTTAATTTTCATTATAATCGTTTGTTCTTATACAAACGTTTGGTAACTTCGTTCCACTCTCTAATCTTATATTTATTTTTTGTATTTATTATTTAACTTGTAAGTTGTTCTTGTTAAGTTTCGTATTTTATAATTTATAATTTTATATCATGGAGTGTTCTAAAAAAAGTGGAAGTAAAAAAGGTCTAGTAGAATCAGTAAAAAAATTAGTTAAAAAAACTAACAAAGGTGTTAGTTCGTCTAAATCTAAAATTCCTCTTGTTAGAATAAATACAGATGAATTTACGCATGTGAATGAAACTAGTTTTTCCCGTCCCGGTCCTATAAATATTAATTCAGATAGTCCGACTCCCCATGAACTCTATGAAAGATATTATGGTATTAAT</gDNA_template>
            <first_frame> Y  N  L  Y  H  L  V  I  W  C  I  S  E  E  E  S  S  S  N  F  K  F  R  H  Q  Y  F  N  F  H  Y  N  R  L  F  L  Y  K  R  L  V  T  S  F  H  S  L  I  L  Y  L  F  F  V  F  I  I  *  L  V  S  C  S  C  *  V  S  Y  F  I  I  Y  N  F  I  S  W  S  V  L  K  K  V  E  V  K  K  V  *  *  N  Q  *  K  N  *  L  K  K  L  T  K  V  L  V  R  L  N  L  K  F  L  L  L  E  *  I  Q  M  N  L  R  M  *  M  K  L  V  F  P  V  P  V  L  *  I  L  I  Q  I  V  R  L  P  M  N  S  M  K  D  I  M  V  L   </first_frame>
            <second_frame>  I  T  Y  I  I  W  S  F  G  V  F  R  R  R  N  L  L  Q  I  S  S  F  D  I  N  I  L  I  F  I  I  I  V  C  S  Y  T  N  V  W  *  L  R  S  T  L  *  S  Y  I  Y  F  L  Y  L  L  F  N  L  *  V  V  L  V  K  F  R  I  L  *  F  I  I  L  Y  H  G  V  F  *  K  K  W  K  *  K  R  S  S  R  I  S  K  K  I  S  *  K  N  *  Q  R  C  *  F  V  *  I  *  N  S  S  C  *  N  K  Y  R  *  I  Y  A  C  E  *  N  *  F  F  P  S  R  S  Y  K  Y  *  F  R  *  S  D  S  P  *  T  L  *  K  I  L  W  Y  *  </second_frame>
            <third_frame>   *  L  I  S  F  G  H  L  V  Y  F  G  G  G  I  F  F  K  F  Q  V  S  T  S  I  F  *  F  S  L  *  S  F  V  L  I  Q  T  F  G  N  F  V  P  L  S  N  L  I  F  I  F  C  I  Y  Y  L  T  C  K  L  F  L  L  S  F  V  F  Y  N  L  *  F  Y  I  M  E  C  S  K  K  S  G  S  K  K  G  L  V  E  S  V  K  K  L  V  K  K  T  N  K  G  V  S  S  S  K  S  K  I  P  L  V  R  I  N  T  D  E  F  T  H  V  N  E  T  S  F  S  R  P  G  P  I  N  I  N  S  D  S  P  T  P  H  E  L  Y  E  R  Y  Y  G  I  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0106K23.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77968" stop="78213"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FYIMECSKKSGSKKGLVESVKKLVKKTNKGVSSSKSKIPLVRINTDEFTHVNETSFSRPGPININSDSPTPHELYERYYGIN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="82409" PGL_stop="84756"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82409" e_stop="82447"/>
            <exon e_start="83063" e_stop="83229"/>
            <exon e_start="83723" e_stop="83920"/>
            <exon e_start="84313" e_stop="84756"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.998" e_score="0.872"/>
          <exon-intron don_prob="1.000" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.986" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.872">
            <gDNA_exon_boundary e_start="82409" e_stop="82447" e_length="39"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.998">
            <gDNA_intron_boundary i_start="82448" i_stop="83062" i_length="615"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="83063" e_stop="83229" e_length="167"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="83230" i_stop="83722" i_length="493"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="83723" e_stop="83920" e_length="198"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.986">
            <gDNA_intron_boundary i_start="83921" i_stop="84312" i_length="392"/>
          </intron>
          <exon e_serial="4" e_score="0.998">
            <gDNA_exon_boundary e_start="84313" e_stop="84756" e_length="444"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82409" stop="82447"/>
              <exon start="83063" stop="83229"/>
              <exon start="83723" stop="83920"/>
              <exon start="84313" stop="84756"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U312551" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCGAACACCACAGAGGTAGAAGAACAGCAGACGCAATGG : GTGCTTACACTTATGTGTCGGAGCTATGGAGGAAGAAGCAGTCGGATGTTATGAGGTTCTTGCAAAGGGTGAGGTGCTGGGAGTACCGTCAACTCCCTTCTATCGTCCGTGTCACCAGGCCTACACGTCCTGACAAGGCACGCCGCTTGGGATACAAGGCCAAGCAG : GGTTATGTGGTCTATCGTGTTCGTGTGAAACGTGGTGGAAGGAAGAGGCCTGTTTCAAAGGGTATTGTGTATGGTAAGCCCACCAACCAGGGAGTCACACAATTGAAGTTCCAGCGCAGCAAGCGATCTGTTGCTGAGGAGCGTGCTGGAAGGAAGTTGGGTGGTCTTAGAGTCCTGAACTCCTACTGGATTAATGAG : GATTCTACCTACAAGTACTTTGAGGTAATATTGGTTGACCAGGCTCATGCTGCTATCCGCAATGATCCAAGGATCAACTGGATCTGCAACCCAGTGCATAAGCACAGAGAATTGCGTGGTCTTACTTCAGCTGGTAAGAAATACAGAGGACTCCGAGGAAGAGGACATCTCCACCACAAGGCTCGCCCCTCAAGAAGGGCAACCTGGAAAAGGAACCAGACTCTGTCTCTCCGTCGTTACCGTTGATCTGCTTGACCTTTTTGAGAGGAGTGTCGCTTGCTTAATTTTTTGCATTATCTGGTTTTAGCCCTTTTATCTTGAAACATTCAGCTGTTTACAATTTTGAACAACTAGTTTTGTATTTGAAGTATCCATGTTCTTGCTGAACGAGTCTCTTGAACTTAAAACAATAGTTTCTAGTAAAATTTTGTGTTGAAAGTATAC</gDNA_template>
            <first_frame> P  N  T  T  E  V  E  E  Q  Q  T  Q  W  :  V  L  T  L  M  C  R  S  Y  G  G  R  S  S  R  M  L  *  G  S  C  K  G  *  G  A  G  S  T  V  N  S  L  L  S  S  V  S  P  G  L  H  V  L  T  R  H  A  A  W  D  T  R  P  S  R :   V  M  W  S  I  V  F  V  *  N  V  V  E  G  R  G  L  F  Q  R  V  L  C  M  V  S  P  P  T  R  E  S  H  N  *  S  S  S  A  A  S  D  L  L  L  R  S  V  L  E  G  S  W  V  V  L  E  S  *  T  P  T  G  L  M  R :   I  L  P  T  S  T  L  R  *  Y  W  L  T  R  L  M  L  L  S  A  M  I  Q  G  S  T  G  S  A  T  Q  C  I  S  T  E  N  C  V  V  L  L  Q  L  V  R  N  T  E  D  S  E  E  E  D  I  S  T  T  R  L  A  P  Q  E  G  Q  P  G  K  G  T  R  L  C  L  S  V  V  T  V  D  L  L  D  L  F  E  R  S  V  A  C  L  I  F  C  I  I  W  F  *  P  F  Y  L  E  T  F  S  C  L  Q  F  *  T  T  S  F  V  F  E  V  S  M  F  L  L  N  E  S  L  E  L  K  T  I  V  S  S  K  I  L  C  *  K  Y   </first_frame>
            <second_frame>  R  T  P  Q  R  *  K  N  S  R  R  N  G :   C  L  H  L  C  V  G  A  M  E  E  E  A  V  G  C  Y  E  V  L  A  K  G  E  V  L  G  V  P  S  T  P  F  Y  R  P  C  H  Q  A  Y  T  S  *  Q  G  T  P  L  G  I  Q  G  Q  A   : G  L  C  G  L  S  C  S  C  E  T  W  W  K  E  E  A  C  F  K  G  Y  C  V  W  *  A  H  Q  P  G  S  H  T  I  E  V  P  A  Q  Q  A  I  C  C  *  G  A  C  W  K  E  V  G  W  S  *  S  P  E  L  L  L  D  *  *   : G  F  Y  L  Q  V  L  *  G  N  I  G  *  P  G  S  C  C  Y  P  Q  *  S  K  D  Q  L  D  L  Q  P  S  A  *  A  Q  R  I  A  W  S  Y  F  S  W  *  E  I  Q  R  T  P  R  K  R  T  S  P  P  Q  G  S  P  L  K  K  G  N  L  E  K  E  P  D  S  V  S  P  S  L  P  L  I  C  L  T  F  L  R  G  V  S  L  A  *  F  F  A  L  S  G  F  S  P  F  I  L  K  H  S  A  V  Y  N  F  E  Q  L  V  L  Y  L  K  Y  P  C  S  C  *  T  S  L  L  N  L  K  Q  *  F  L  V  K  F  C  V  E  S  I  </second_frame>
            <third_frame>   E  H  H  R  G  R  R  T  A  D  A  M   : G  A  Y  T  Y  V  S  E  L  W  R  K  K  Q  S  D  V  M  R  F  L  Q  R  V  R  C  W  E  Y  R  Q  L  P  S  I  V  R  V  T  R  P  T  R  P  D  K  A  R  R  L  G  Y  K  A  K  Q  :  G  Y  V  V  Y  R  V  R  V  K  R  G  G  R  K  R  P  V  S  K  G  I  V  Y  G  K  P  T  N  Q  G  V  T  Q  L  K  F  Q  R  S  K  R  S  V  A  E  E  R  A  G  R  K  L  G  G  L  R  V  L  N  S  Y  W  I  N  E  :  D  S  T  Y  K  Y  F  E  V  I  L  V  D  Q  A  H  A  A  I  R  N  D  P  R  I  N  W  I  C  N  P  V  H  K  H  R  E  L  R  G  L  T  S  A  G  K  K  Y  R  G  L  R  G  R  G  H  L  H  H  K  A  R  P  S  R  R  A  T  W  K  R  N  Q  T  L  S  L  R  R  Y  R  *  S  A  *  P  F  *  E  E  C  R  L  L  N  F  L  H  Y  L  V  L  A  L  L  S  *  N  I  Q  L  F  T  I  L  N  N  *  F  C  I  *  S  I  H  V  L  A  E  R  V  S  *  T  *  N  N  S  F  *  *  N  F  V  L  K  V  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0106K23.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82411" stop="82447"/>
                    <exon start="83063" stop="83229"/>
                    <exon start="83723" stop="83920"/>
                    <exon start="84313" stop="84558"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>645</number_coding_nucleotides>
                  <number_encoded_amino_acids>215</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EHHRGRRTADAMGAYTYVSELWRKKQSDVMRFLQRVRCWEYRQLPSIVRVTRPTRPDKARRLGYKAKQGYVVYRVRVKRGGRKRPVSKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDQAHAAIRNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGRGHLHHKARPSRRATWKRNQTLSLRRYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="82418" e_stop="82447"/>
            <exon e_start="83063" e_stop="83225"/>
            <exon e_start="83551" e_stop="83573"/>
            <exon e_start="83723" e_stop="83920"/>
            <exon e_start="84313" e_stop="84456"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.475" acc_prob="0.949" e_score="0.877"/>
          <exon-intron don_prob="0.000" acc_prob="0.997" e_score="0.696"/>
          <exon-intron don_prob="0.993" acc_prob="0.986" e_score="0.990"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="82418" e_stop="82447" e_length="30"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.998">
            <gDNA_intron_boundary i_start="82448" i_stop="83062" i_length="615"/>
          </intron>
          <exon e_serial="2" e_score="0.877">
            <gDNA_exon_boundary e_start="83063" e_stop="83225" e_length="163"/>
          </exon>
          <intron i_serial="2" don_prob="0.475" acc_prob="0.949">
            <gDNA_intron_boundary i_start="83226" i_stop="83550" i_length="325"/>
          </intron>
          <exon e_serial="3" e_score="0.696">
            <gDNA_exon_boundary e_start="83551" e_stop="83573" e_length="23"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="83574" i_stop="83722" i_length="149"/>
          </intron>
          <exon e_serial="4" e_score="0.990">
            <gDNA_exon_boundary e_start="83723" e_stop="83920" e_length="198"/>
          </exon>
          <intron i_serial="4" don_prob="0.993" acc_prob="0.986">
            <gDNA_intron_boundary i_start="83921" i_stop="84312" i_length="392"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="84313" e_stop="84456" e_length="144"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82418" stop="82447"/>
              <exon start="83063" stop="83225"/>
              <exon start="83551" stop="83573"/>
              <exon start="83723" stop="83920"/>
              <exon start="84313" stop="84456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U333659" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACAGAGGTAGAAGAACAGCAGACGCAATGG : GTGCTTACACTTATGTGTCGGAGCTATGGAGGAAGAAGCAGTCGGATGTTATGAGGTTCTTGCAAAGGGTGAGGTGCTGGGAGTACCGTCAACTCCCTTCTATCGTCCGTGTCACCAGGCCTACACGTCCTGACAAGGCACGCCGCTTGGGATACAAGGCCAA : TTTTGAGATACAAAGGATAGAAA : GGTTATGTGGTCTATCGTGTTCGTGTGAAACGTGGTGGAAGGAAGAGGCCTGTTTCAAAGGGTATTGTGTATGGTAAGCCCACCAACCAGGGAGTCACACAATTGAAGTTCCAGCGCAGCAAGCGATCTGTTGCTGAGGAGCGTGCTGGAAGGAAGTTGGGTGGTCTTAGAGTCCTGAACTCCTACTGGATTAATGAG : GATTCTACCTACAAGTACTTTGAGGTAATATTGGTTGACCAGGCTCATGCTGCTATCCGCAATGATCCAAGGATCAACTGGATCTGCAACCCAGTGCATAAGCACAGAGAATTGCGTGGTCTTACTTCAGCTGGTAAGAAATAC</gDNA_template>
            <first_frame> T  E  V  E  E  Q  Q  T  Q  W  :  V  L  T  L  M  C  R  S  Y  G  G  R  S  S  R  M  L  *  G  S  C  K  G  *  G  A  G  S  T  V  N  S  L  L  S  S  V  S  P  G  L  H  V  L  T  R  H  A  A  W  D  T  R  P   : I  L  R  Y  K  G  *  K  :  G  Y  V  V  Y  R  V  R  V  K  R  G  G  R  K  R  P  V  S  K  G  I  V  Y  G  K  P  T  N  Q  G  V  T  Q  L  K  F  Q  R  S  K  R  S  V  A  E  E  R  A  G  R  K  L  G  G  L  R  V  L  N  S  Y  W  I  N  E  :  D  S  T  Y  K  Y  F  E  V  I  L  V  D  Q  A  H  A  A  I  R  N  D  P  R  I  N  W  I  C  N  P  V  H  K  H  R  E  L  R  G  L  T  S  A  G  K  K  Y </first_frame>
            <second_frame>  Q  R  *  K  N  S  R  R  N  G :   C  L  H  L  C  V  G  A  M  E  E  E  A  V  G  C  Y  E  V  L  A  K  G  E  V  L  G  V  P  S  T  P  F  Y  R  P  C  H  Q  A  Y  T  S  *  Q  G  T  P  L  G  I  Q  G  Q  :  F  *  D  T  K  D  R  K :   V  M  W  S  I  V  F  V  *  N  V  V  E  G  R  G  L  F  Q  R  V  L  C  M  V  S  P  P  T  R  E  S  H  N  *  S  S  S  A  A  S  D  L  L  L  R  S  V  L  E  G  S  W  V  V  L  E  S  *  T  P  T  G  L  M  R :   I  L  P  T  S  T  L  R  *  Y  W  L  T  R  L  M  L  L  S  A  M  I  Q  G  S  T  G  S  A  T  Q  C  I  S  T  E  N  C  V  V  L  L  Q  L  V  R  N   </second_frame>
            <third_frame>   R  G  R  R  T  A  D  A  M   : G  A  Y  T  Y  V  S  E  L  W  R  K  K  Q  S  D  V  M  R  F  L  Q  R  V  R  C  W  E  Y  R  Q  L  P  S  I  V  R  V  T  R  P  T  R  P  D  K  A  R  R  L  G  Y  K  A  N :   F  E  I  Q  R  I  E   : R  L  C  G  L  S  C  S  C  E  T  W  W  K  E  E  A  C  F  K  G  Y  C  V  W  *  A  H  Q  P  G  S  H  T  I  E  V  P  A  Q  Q  A  I  C  C  *  G  A  C  W  K  E  V  G  W  S  *  S  P  E  L  L  L  D  *  *   : G  F  Y  L  Q  V  L  *  G  N  I  G  *  P  G  S  C  C  Y  P  Q  *  S  K  D  Q  L  D  L  Q  P  S  A  *  A  Q  R  I  A  W  S  Y  F  S  W  *  E  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0106K23.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83571" stop="83573"/>
                    <exon start="83723" stop="83920"/>
                    <exon start="84313" stop="84456"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>345</number_coding_nucleotides>
                  <number_encoded_amino_acids>115</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KGYVVYRVRVKRGGRKRPVSKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDQAHAAIRNDPRINWICNPVHKHRELRGLTSAGKKY</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0106K23.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82420" stop="82447"/>
                    <exon start="83063" stop="83225"/>
                    <exon start="83551" stop="83573"/>
                    <exon start="83723" stop="83799"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>288</number_coding_nucleotides>
                  <number_encoded_amino_acids>96</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RGRRTADAMGAYTYVSELWRKKQSDVMRFLQRVRCWEYRQLPSIVRVTRPTRPDKARRLGYKANFEIQRIERLCGLSCSCETWWKEEACFKGYCVW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="85543" PGL_stop="86735"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85543" e_stop="85601"/>
            <exon e_start="85958" e_stop="86131"/>
            <exon e_start="86229" e_stop="86735"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.393" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="85543" e_stop="85601" e_length="59"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.987">
            <gDNA_intron_boundary i_start="85602" i_stop="85957" i_length="356"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="85958" e_stop="86131" e_length="174"/>
          </exon>
          <intron i_serial="2" don_prob="0.393" acc_prob="0.998">
            <gDNA_intron_boundary i_start="86132" i_stop="86228" i_length="97"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="86229" e_stop="86735" e_length="507"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85543" stop="85601"/>
              <exon start="85958" stop="86131"/>
              <exon start="86229" stop="86735"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U332175" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATGGCTCAGCCTTACAGAACTGCTTATCATTTCCAACCTCCCAAGAATTGGATAAATG : GACCAATGATCTACAAGGGAATTTACCATTTATTTTACCAGTACAATCCTGAAAGTGCAGAATGGGGAAACATAGCATGGGGCCATTCTACTTCAACTGATCTTGTCAACTGGACTATTCATCCTCCCGCTCTTTTGCCTTCAGACGCATATGATATCAACGGTTGTTGGTCAG : GTTCTGCGACGATCCTCCAAGATGGCACACCAGCTATACTCTATACCGGAGGCAATTCACAAAAAGTTCAACTTCAAAATCTAGCTGTGCCTAAAGATCCATCCGACCCTTACCTTGTCGAATGGGTTAAATCTCCTGATAATCCAATCATGATACCGAATGAAGATGAGAAAGAATCGTTTAGAGACCCAACCACCGCGTGGTTAGGGCCTGATGGGATTTGGAGAGTTGTTATAGGAAATGAAAGAGAAAACAGAGGAACTGCTGTTTTATATAAGAGTGAAGATTTTATTCGTTGGACTGAAGCAGAGCGGCCTCTGCATTCGTCCAGTGAAACTACAATGTGGGAATGCCCTGATTTTTTCCCTGTCTTAGTTGACGGGGAAAATGGACTTGACATTTCAGAGATTTTTTCAGGGATAAAACACGTGCTTAAAAATAGCGTGGCTCGTTCATTTGTTGATTATTATACTGTTGGAGCGTATGACCATCACAACGATGTGTATA</gDNA_template>
            <first_frame> H  G  S  A  L  Q  N  C  L  S  F  P  T  S  Q  E  L  D  K  W :   T  N  D  L  Q  G  N  L  P  F  I  L  P  V  Q  S  *  K  C  R  M  G  K  H  S  M  G  P  F  Y  F  N  *  S  C  Q  L  D  Y  S  S  S  R  S  F  A  F  R  R  I  *  Y  Q  R  L  L  V  R :   F  C  D  D  P  P  R  W  H  T  S  Y  T  L  Y  R  R  Q  F  T  K  S  S  T  S  K  S  S  C  A  *  R  S  I  R  P  L  P  C  R  M  G  *  I  S  *  *  S  N  H  D  T  E  *  R  *  E  R  I  V  *  R  P  N  H  R  V  V  R  A  *  W  D  L  E  S  C  Y  R  K  *  K  R  K  Q  R  N  C  C  F  I  *  E  *  R  F  Y  S  L  D  *  S  R  A  A  S  A  F  V  Q  *  N  Y  N  V  G  M  P  *  F  F  P  C  L  S  *  R  G  K  W  T  *  H  F  R  D  F  F  R  D  K  T  R  A  *  K  *  R  G  S  F  I  C  *  L  L  Y  C  W  S  V  *  P  S  Q  R  C  V   </first_frame>
            <second_frame>  M  A  Q  P  Y  R  T  A  Y  H  F  Q  P  P  K  N  W  I  N   : G  P  M  I  Y  K  G  I  Y  H  L  F  Y  Q  Y  N  P  E  S  A  E  W  G  N  I  A  W  G  H  S  T  S  T  D  L  V  N  W  T  I  H  P  P  A  L  L  P  S  D  A  Y  D  I  N  G  C  W  S   : G  S  A  T  I  L  Q  D  G  T  P  A  I  L  Y  T  G  G  N  S  Q  K  V  Q  L  Q  N  L  A  V  P  K  D  P  S  D  P  Y  L  V  E  W  V  K  S  P  D  N  P  I  M  I  P  N  E  D  E  K  E  S  F  R  D  P  T  T  A  W  L  G  P  D  G  I  W  R  V  V  I  G  N  E  R  E  N  R  G  T  A  V  L  Y  K  S  E  D  F  I  R  W  T  E  A  E  R  P  L  H  S  S  S  E  T  T  M  W  E  C  P  D  F  F  P  V  L  V  D  G  E  N  G  L  D  I  S  E  I  F  S  G  I  K  H  V  L  K  N  S  V  A  R  S  F  V  D  Y  Y  T  V  G  A  Y  D  H  H  N  D  V  Y  </second_frame>
            <third_frame>   W  L  S  L  T  E  L  L  I  I  S  N  L  P  R  I  G  *  M  :  D  Q  *  S  T  R  E  F  T  I  Y  F  T  S  T  I  L  K  V  Q  N  G  E  T  *  H  G  A  I  L  L  Q  L  I  L  S  T  G  L  F  I  L  P  L  F  C  L  Q  T  H  M  I  S  T  V  V  G  Q  :  V  L  R  R  S  S  K  M  A  H  Q  L  Y  S  I  P  E  A  I  H  K  K  F  N  F  K  I  *  L  C  L  K  I  H  P  T  L  T  L  S  N  G  L  N  L  L  I  I  Q  S  *  Y  R  M  K  M  R  K  N  R  L  E  T  Q  P  P  R  G  *  G  L  M  G  F  G  E  L  L  *  E  M  K  E  K  T  E  E  L  L  F  Y  I  R  V  K  I  L  F  V  G  L  K  Q  S  G  L  C  I  R  P  V  K  L  Q  C  G  N  A  L  I  F  S  L  S  *  L  T  G  K  M  D  L  T  F  Q  R  F  F  Q  G  *  N  T  C  L  K  I  A  W  L  V  H  L  L  I  I  I  L  L  E  R  M  T  I  T  T  M  C  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0106K23.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85544" stop="85601"/>
                    <exon start="85958" stop="86131"/>
                    <exon start="86229" stop="86734"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>738</number_coding_nucleotides>
                  <number_encoded_amino_acids>246</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MAQPYRTAYHFQPPKNWINGPMIYKGIYHLFYQYNPESAEWGNIAWGHSTSTDLVNWTIHPPALLPSDAYDINGCWSGSATILQDGTPAILYTGGNSQKVQLQNLAVPKDPSDPYLVEWVKSPDNPIMIPNEDEKESFRDPTTAWLGPDGIWRVVIGNERENRGTAVLYKSEDFIRWTEAERPLHSSSETTMWECPDFFPVLVDGENGLDISEIFSGIKHVLKNSVARSFVDYYTVGAYDHHNDVY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="86864" PGL_stop="88279"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="86864" e_stop="86908"/>
            <exon e_start="87018" e_stop="87176"/>
            <exon e_start="87276" e_stop="87520"/>
            <exon e_start="87622" e_stop="87712"/>
            <exon e_start="87811" e_stop="88279"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.848" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.932" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="86864" e_stop="86908" e_length="45"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.848">
            <gDNA_intron_boundary i_start="86909" i_stop="87017" i_length="109"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="87018" e_stop="87176" e_length="159"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.932">
            <gDNA_intron_boundary i_start="87177" i_stop="87275" i_length="99"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="87276" e_stop="87520" e_length="245"/>
          </exon>
          <intron i_serial="3" don_prob="0.968" acc_prob="0.998">
            <gDNA_intron_boundary i_start="87521" i_stop="87621" i_length="101"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="87622" e_stop="87712" e_length="91"/>
          </exon>
          <intron i_serial="4" don_prob="0.961" acc_prob="0.000">
            <gDNA_intron_boundary i_start="87713" i_stop="87810" i_length="98"/>
          </intron>
          <exon e_serial="5" e_score="0.998">
            <gDNA_exon_boundary e_start="87811" e_stop="88279" e_length="469"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86864" stop="86908"/>
              <exon start="87018" stop="87176"/>
              <exon start="87276" stop="87520"/>
              <exon start="87622" stop="87712"/>
              <exon start="87811" stop="88279"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U323917" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACAAGTAAGGAAATCGATTTAATTAAAGGATGGTCTGGTCTTCAG : TCGTTTCCTAGGAAAATTTGGCTGGATAAAGGTGGAAAGCAATTGGTTCAATGGCCTGTTGAAGAAATCGAAATGCTGAGGACAAACAAAGTTGATTTACAAAATATAACACTCGAAGCTGGTTTAAAACGTGAGATTTGTGGTGTCACTGCTGCACAG : GCTGATGTAGAAATCTCCTTCTCAATTCCAATTGCGGTGCTTGAGCAGGCAGAGGTGCTGGAATCAAATTGGACGAATCCACAAGAGATAGCTAACCAAAGTGGTTCATTAGCCAACACTGGTGTTGGACCTTTTGGGTTGCTAGTTTTGGCCTCAAATAAAATTGAAGAATATACAGCAATATTCTTTAGAATTTTCAAAAAGAATGACAAGTTTGTTGTGTTAATGGGCTGTGACCAAAAAAG : GTCATCTGTGGGCCTTGAATATGATAAAACCAATTATGGAGCCTTTTTGGACATTGATCCTCTTACAGAAAAATTATCACTAAGAACTTTG : ATTGATCATTCGATTGTAGAAAGCTTTGGCGGAGGTGGAAAAGCTTGCATCACAACAAGAGCTTATCCAACTTTGGCCATCAATGATAATGCCCATATTTTTGTTTTCAACAATGGATCCCAACATGTTGACATCTCCACTTTGAGTGCTTGGAGCCTAAACCAGGCTCACATCAATTGAATCATTAATTCAAAATGTAATTTTTAAAATTTTCAACCACCAAAACATTTGGAGAAGTCTTTGCCATTTTGTTCATTTTAAAGTTTGTTTGAATCGTTTACTGCTCTTGCATTTATGTAACTACAACTACATACTTGCCCTTTTTTACTTGTCATTCTTACGCAATAATCTACTTTACAGACGTGTGTACGCAACATTTTAAATGTTGTAATTTTAAATTTATCATGTAAAATATTGAAGACATTCTTTTTGAAACATTTTTTTTTTAAAAAAAGAAAAGTAAAATACT</gDNA_template>
            <first_frame> T  S  K  E  I  D  L  I  K  G  W  S  G  L  Q  :  S  F  P  R  K  I  W  L  D  K  G  G  K  Q  L  V  Q  W  P  V  E  E  I  E  M  L  R  T  N  K  V  D  L  Q  N  I  T  L  E  A  G  L  K  R  E  I  C  G  V  T  A  A  Q  :  A  D  V  E  I  S  F  S  I  P  I  A  V  L  E  Q  A  E  V  L  E  S  N  W  T  N  P  Q  E  I  A  N  Q  S  G  S  L  A  N  T  G  V  G  P  F  G  L  L  V  L  A  S  N  K  I  E  E  Y  T  A  I  F  F  R  I  F  K  K  N  D  K  F  V  V  L  M  G  C  D  Q  K  R :   S  S  V  G  L  E  Y  D  K  T  N  Y  G  A  F  L  D  I  D  P  L  T  E  K  L  S  L  R  T  L  :  I  D  H  S  I  V  E  S  F  G  G  G  G  K  A  C  I  T  T  R  A  Y  P  T  L  A  I  N  D  N  A  H  I  F  V  F  N  N  G  S  Q  H  V  D  I  S  T  L  S  A  W  S  L  N  Q  A  H  I  N  *  I  I  N  S  K  C  N  F  *  N  F  Q  P  P  K  H  L  E  K  S  L  P  F  C  S  F  *  S  L  F  E  S  F  T  A  L  A  F  M  *  L  Q  L  H  T  C  P  F  L  L  V  I  L  T  Q  *  S  T  L  Q  T  C  V  R  N  I  L  N  V  V  I  L  N  L  S  C  K  I  L  K  T  F  F  L  K  H  F  F  F  K  K  R  K  V  K  Y  </first_frame>
            <second_frame>  Q  V  R  K  S  I  *  L  K  D  G  L  V  F  S :   R  F  L  G  K  F  G  W  I  K  V  E  S  N  W  F  N  G  L  L  K  K  S  K  C  *  G  Q  T  K  L  I  Y  K  I  *  H  S  K  L  V  *  N  V  R  F  V  V  S  L  L  H  R :   L  M  *  K  S  P  S  Q  F  Q  L  R  C  L  S  R  Q  R  C  W  N  Q  I  G  R  I  H  K  R  *  L  T  K  V  V  H  *  P  T  L  V  L  D  L  L  G  C  *  F  W  P  Q  I  K  L  K  N  I  Q  Q  Y  S  L  E  F  S  K  R  M  T  S  L  L  C  *  W  A  V  T  K  K   : G  H  L  W  A  L  N  M  I  K  P  I  M  E  P  F  W  T  L  I  L  L  Q  K  N  Y  H  *  E  L  * :   L  I  I  R  L  *  K  A  L  A  E  V  E  K  L  A  S  Q  Q  E  L  I  Q  L  W  P  S  M  I  M  P  I  F  L  F  S  T  M  D  P  N  M  L  T  S  P  L  *  V  L  G  A  *  T  R  L  T  S  I  E  S  L  I  Q  N  V  I  F  K  I  F  N  H  Q  N  I  W  R  S  L  C  H  F  V  H  F  K  V  C  L  N  R  L  L  L  L  H  L  C  N  Y  N  Y  I  L  A  L  F  Y  L  S  F  L  R  N  N  L  L  Y  R  R  V  Y  A  T  F  *  M  L  *  F  *  I  Y  H  V  K  Y  *  R  H  S  F  *  N  I  F  F  L  K  K  E  K  *  N  T </second_frame>
            <third_frame>   K  *  G  N  R  F  N  *  R  M  V  W  S  S   : V  V  S  *  E  N  L  A  G  *  R  W  K  A  I  G  S  M  A  C  *  R  N  R  N  A  E  D  K  Q  S  *  F  T  K  Y  N  T  R  S  W  F  K  T  *  D  L  W  C  H  C  C  T   : G  *  C  R  N  L  L  L  N  S  N  C  G  A  *  A  G  R  G  A  G  I  K  L  D  E  S  T  R  D  S  *  P  K  W  F  I  S  Q  H  W  C  W  T  F  W  V  A  S  F  G  L  K  *  N  *  R  I  Y  S  N  I  L  *  N  F  Q  K  E  *  Q  V  C  C  V  N  G  L  *  P  K  K  :  V  I  C  G  P  *  I  *  *  N  Q  L  W  S  L  F  G  H  *  S  S  Y  R  K  I  I  T  K  N  F   : D  *  S  F  D  C  R  K  L  W  R  R  W  K  S  L  H  H  N  K  S  L  S  N  F  G  H  Q  *  *  C  P  Y  F  C  F  Q  Q  W  I  P  T  C  *  H  L  H  F  E  C  L  E  P  K  P  G  S  H  Q  L  N  H  *  F  K  M  *  F  L  K  F  S  T  T  K  T  F  G  E  V  F  A  I  L  F  I  L  K  F  V  *  I  V  Y  C  S  C  I  Y  V  T  T  T  T  Y  L  P  F  F  T  C  H  S  Y  A  I  I  Y  F  T  D  V  C  T  Q  H  F  K  C  C  N  F  K  F  I  M  *  N  I  E  D  I  L  F  E  T  F  F  F  *  K  K  K  S  K  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0106K23.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="86864" stop="86908"/>
                    <exon start="87018" stop="87176"/>
                    <exon start="87276" stop="87520"/>
                    <exon start="87622" stop="87712"/>
                    <exon start="87811" stop="87990"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>717</number_coding_nucleotides>
                  <number_encoded_amino_acids>239</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSKEIDLIKGWSGLQSFPRKIWLDKGGKQLVQWPVEEIEMLRTNKVDLQNITLEAGLKREICGVTAAQADVEISFSIPIAVLEQAEVLESNWTNPQEIANQSGSLANTGVGPFGLLVLASNKIEEYTAIFFRIFKKNDKFVVLMGCDQKRSSVGLEYDKTNYGAFLDIDPLTEKLSLRTLIDHSIVESFGGGGKACITTRAYPTLAINDNAHIFVFNNGSQHVDISTLSAWSLNQAHIN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0106K23.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87971" stop="88192"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TRLTSIESLIQNVIFKIFNHQNIWRSLCHFVHFKVCLNRLLLLHLCNYNYILALFYLSFLRNNLLYRRVYATF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 21 chains have been computed
$ 
$ memory statistics:
$ 27880 bytes spliced alignments in total
$ 13 spliced alignments have been stored
$ 2144 bytes was the average size of a spliced alignment
$ 17336 bytes predicted gene locations in total
$ 9 predicted gene locations have been stored
$ 1926 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 24 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 14:33:41
-->
