<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 14:33:59"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335073" ref_strand="+" ref_description="SGN-U335073        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 3e-30, score=135)">
      <seq>ttaggttcgttggtctcatcacacaagaacaggtctagtagagtctttaggaacggtagggggacgcctttacttttctttgagaggctataagactttaggaaaatttcaccctttcattctttctttcgtgctactacttgagtccaattggtatctaggcgatacaaattggtatctgaccatcttcactctcttttgcagatggttagaactagagcaacgaccacgtcaacaccaacaccggccagacaagaaacaactgagccagccactggggctgtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0116O16.1" temp_strand="+" temp_description="C06HBa0116O16.1  AC219211.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0116O16 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="8261" stop="9146"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8561" g_stop="8846" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0116O16.1" gen_strand="+" ref_id="SGN-U335073" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>286</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0116O16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335073" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8561" e_stop="8846"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTGAGGAACAGTAGGGGGACGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAATTTCAATCTTTCATTCTTTCTTTCATGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACGAATTGGTATCTGACCATCTTCACTCTATTTCGCAGATGGTTAGAACTAGAGCAACGACTACGCCAACACCAACACCGGCCAGACAAGAAACAACTGAGTCAGCCACTGGGGCTGTGG</genome_strand>
        <mrna_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTTAGGAACGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGACTTTAGGAAAATTTCACCCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACAAATTGGTATCTGACCATCTTCACTCTCTTTTGCAGATGGTTAGAACTAGAGCAACGACCACGTCAACACCAACACCGGCCAGACAAGAAACAACTGAGCCAGCCACTGGGGCTGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335932" ref_strand="+" ref_description="SGN-U335932        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|2190718|gb|AAB64397.1| beta-galactosidase [unidentified cloning vector](evalue: 3e-14, score=80.1)">
      <seq>cccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattataggcccagtagtcaaacgtggaaatgtacctatgtgcaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataaaccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgttcagtttccccatcctccccttctcttattacttcctcagtcggtggaggagtcaccgccctagtaccagatgggctcggttctcgttctcttcctctagatgacgtcctcccacgacctctaccacggccccttgccgctgttctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0116O16.1" temp_strand="-" temp_description="C06HBa0116O16.1  AC219211.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0116O16 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="9585" stop="8553"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9285" g_stop="8853" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="433" r_length="433" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0116O16.1" gen_strand="-" ref_id="SGN-U335932" ref_strand="+">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0116O16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335932" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9285" e_stop="8853"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTTGAAGACTGGAGGTTTCAATTTCAATAACTTACTGAAAAAATCATGCTGATCACTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAATGTGCCTATTTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAGAAAACTGGGGGTGTCTGGCCCTGATCAGATAATCCACTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCATTCACCCCATCCTCCCCCTCTCTTATCACTTCCTCAGTCGGTGGAGGAGTCACTGCCCTAGTATCAGATGGGCTAGGTGCTCGTCCTCTTCCTCTAGAGGACGTCCTCCCACGACCTCTACCACGGCCTCTTGCCGTTGTTCTTC</genome_strand>
        <mrna_strand>CCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAAACGTGGAAATGTACCTATGTGCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAAACCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCTCTTATTACTTCCTCAGTCGGTGGAGGAGTCACCGCCCTAGTACCAGATGGGCTCGGTTCTCGTTCTCTTCCTCTAGATGACGTCCTCCCACGACCTCTACCACGGCCCCTTGCCGCTGTTCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335931" ref_strand="+" ref_description="SGN-U335931        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|47824972|gb|AAT38745.1| putative polyprotein, 3'-partial [Solanum demissum] (evalue: 1e-33, score=146)">
      <seq>acctagcccatctggtactaaggcggtgacacctccaccaactgaggaagtggtaagagagggtgaggatggggagaatgaacaagtgcagaatgaggaattgccaccccaacctacccaagagatgatcaatcaggttcttgcttaccttagcgggttatctgatcaaggccaagcacctccagtgttttctgcactagcacctcaggctccggaggtacaacatgcgcctactgtgactccccgcatcgatacctcattggaaataggaacgtttccccgtctgactacagggcctataatgacaaatgatcagcatgaactttttagtaagttcttgaaattgaaacctcaagtctacaagggtgttgaatctgaggatgcctacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggtttggtgttgagtttgtgacttatcagtttcaagggaacgccaaaatgtggtggcggtcacatgttgagtgtcaaccaacagaggcaccacgtatgacttgggcatcattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0116O16.1" temp_strand="+" temp_description="C06HBa0116O16.1  AC219211.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0116O16 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="8620" stop="9773"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8920" g_stop="9473" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0116O16.1" gen_strand="+" ref_id="SGN-U335931" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0116O16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335931" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8920" e_stop="9473"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTAGCCCATCTGATACTAGGGCAGTGACTCCTCCACCGACTGAGGAAGTGATAAGAGAGGGGGAGGATGGGGTGAATGAACAAGTGCAAAATGAGGAAATGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTGGCTTATCTTAGTGGATTATCTGATCAGGGCCAGACACCCCCAGTTTTCTCTGCACCAGCACCTCAGGCTCCGGAGGTACAACATGCGGCTACTATGGCTCCCCGCATGGATGTTCCATTGGAAATAGGCACATTTCCACGTCTGACTACTGGGCCTATAATGACAAGTGATCAGCATGATTTTTTCAGTAAGTTATTGAAATTGAAACCTCCAGTCTTCAAAGGTGCGGAATCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTGGAGTTTGTGACTTATCAGTTTCAAGGAAACGCCAAAATATGGTGGCGGTCACATATCGAGTGTCAACCAATAGAGGCACCACCTATGACTTGGGCCTCATTCT</genome_strand>
        <mrna_strand>ACCTAGCCCATCTGGTACTAAGGCGGTGACACCTCCACCAACTGAGGAAGTGGTAAGAGAGGGTGAGGATGGGGAGAATGAACAAGTGCAGAATGAGGAATTGCCACCCCAACCTACCCAAGAGATGATCAATCAGGTTCTTGCTTACCTTAGCGGGTTATCTGATCAAGGCCAAGCACCTCCAGTGTTTTCTGCACTAGCACCTCAGGCTCCGGAGGTACAACATGCGCCTACTGTGACTCCCCGCATCGATACCTCATTGGAAATAGGAACGTTTCCCCGTCTGACTACAGGGCCTATAATGACAAATGATCAGCATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCAAGTCTACAAGGGTGTTGAATCTGAGGATGCCTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACGTATGACTTGGGCATCATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U317064" ref_strand="+" ref_description="SGN-U317064        Tomato 200607 #1 [6 ESTs aligned] genbank/nr: gi|47824972|gb|AAT38745.1| putative polyprotein, 3'-partial [Solanum demissum] (evalue: 5e-64, score=248)">
      <seq>acgaataggcatatcaagaaattcacaatgtaaatttagaccattagcaaatgaggaagatacataagaaaacgtggatccaggatcaaacaatacggaagccatgcaatcacaaactagaagattacctgtgatgacagcatcagatgcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcgtttgtctgcccattgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccgttttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataacttggtccgggacaatttatcctaatatgtccaatctccccacatccataacattctctggagtcactcataggccccttggagaagtgttgaccggtctgaggtggacccccaactacagtctgtagtgaagactgaatgggtcgagctgagtaacctccggaaccttgtcctctagagtaagaacccttaaactcacctccctttcgaaacctctttgatgtcgatgtcgtggtgaagtcgtctggcttcactccttccacttctatcacaaagtctaccacttcttggaaggattttgccgttgccgctacctgtaaggacgaaatccgcaattctgacctcaaccccttcacaaaccggcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgttcagtttccccatccctccctttctctattacttcctcagtcagtggaagagtcactgccctagtatcagatgggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0116O16.1" temp_strand="-" temp_description="C06HBa0116O16.1  AC219211.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0116O16 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="10660" stop="8624"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10360" g_stop="8924" g_length="1437"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1437" r_length="1437" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0116O16.1" gen_strand="-" ref_id="SGN-U317064" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>1437</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0116O16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U317064" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10360" e_stop="8924"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAATAGGCATATCAAGAAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACGGAAGCCATGCAATCACAAACAAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCATTTGTCTGTCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTGCCTCGACCACCACGTCCTCCAGAATAACGACCTCTACCATGACCACCCCTACCTCTAGCTATTGGAGGTTTATAACTTGGTCCGGGACAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCACTCATAGGCCCCTCGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAGCCGAGTAACCTCCGGAACCTTGTCCTCTAGAGTAAGAACCCTTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGTCGTGGTGAAGTTGTCTGGCTTCACTCCTTCCATTTCTATCACAAAGTCTACCACTTCTTGGAAGGATGTTGCCGTTGCCGCTACCTGTAAGGCCGAAATCCACAATTCTGACCTCAACCCCTTCACAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGGAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGCTCAGGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGTATATACTTCTCCATAAACAAACTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCATATTTTGGCGTTTCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCATGACAGTCAACCAGAAAATCGTAAGCATCCTCAGATTCCGCACCTTTGAAGACTGGAGGTTTCAATTTCAATAACTTACTGAAAAAATCATGCTGATCACTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAATGTGCCTATTTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAGAAAACTGGGGGTGTCTGGCCCTGATCAGATAATCCACTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCATTCACCCCAT-CCTCCCCCTCTCTTATCACTTCCTCAGTCGGTGGAGGAGTCACTGCCCTAGTATCAGATGGGCT</genome_strand>
        <mrna_strand>ACGAATAGGCATATCAAGAAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACGGAAGCCATGCAATCACAAACTAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGCCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTGGTCCGGGACAATTTATCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCACTCATAGGCCCCTTGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAGCTGAGTAACCTCCGGAACCTTGTCCTCTAGAGTAAGAACCCTTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGTCGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTACCTGTAAGGACGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCCTCCCTTTCTC-TATTACTTCCTCAGTCAGTGGAAGAGTCACTGCCCTAGTATCAGATGGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335938" ref_strand="-" ref_description="SGN-U335938        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 4e-59, score=231)">
      <seq>gcaaggtaggatgtaggtcaatgcatatgaggctaagtttcgtgcactatccagatatgccactcaactttgtttcagtccacaagagaggattcgtcgttttgtgaaagggttgaggtcagagttgcggatttcagcgttacaggtagcggctacggcaaaatccttgcaagaaatggttgacttcgatgtaattctgggtatgacttggctttctccaaattttgcaatcttggattgtaatgctaaaaccgtgacgttagccaagcctgggacagatctgttagtgtaggagggtgactacacttccaatccggtgcgtatcatctcctttcttcgtgctaagaaaatggttagtaaagggtgtttagctttcttggcacatctcaaggataacactacccaagtaccttcgattgactcagtttcagtagttcgtgagtttatggatgtgttccctgcagatcatcctggtatgccaccggatagggatattgacttctgtattgatctcgaaccgggcacacgccccatttttatacccccttatagaatggctcccgcagagttaagagagttaaaggcacaacttcaagagttattgaacaaaggcttcattagaccaagtgcatctccttggggtgctccggttttgttgtaaagatcggcagtttttgaatgtgcatagactaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0116O16.1" temp_strand="+" temp_description="C06HBa0116O16.1  AC219211.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0116O16 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="9247" stop="11291"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9547" g_stop="9733" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="187" r_length="187" r_score="0.893"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9734" i_stop="10477" i_length="744">
            <donor d_prob="0.000" d_score="0.86"/>
            <acceptor a_prob="0.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10478" g_stop="10991" g_length="514"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="694" r_length="507" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0116O16.1" gen_strand="+" ref_id="SGN-U335938" ref_strand="-">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>701</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0116O16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U335938" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="9547" e_stop="9733"/>
          <exon e_start="10478" e_stop="10991"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGGTAGGATGTCGGTTAATGCTTATGAGGCTAAGTTCCGTGCACTATCCAGATATGCCACTCAACTCTGTTTCAGTCCTCAAGAGCGGATTCGCCGGTTTGTGAAGGGGTTGAGGTCAGAATTGTGGATTTCGGCCTTACAGGTAGCGGCAACGGCAACATCCTTCCAAGAAGTGGTAGACTTTGTGATAGAAATGGAAGGAGTGAAGCCAGACAACTTCACCACGACATCGACATCAAAGAGGTTTCGAAAGGGAGGTGAGTTTAAGGGTTCTTACTCTAGAGGACAAGGTTCCGGAGGTTACTCGGCTCGACCCATTCAGTCTTCACTACAGACTGTAGTTGGGGGTCCACCTCAGACCGGTCAACACTTCTCCGAGGGGCCTATGAGTGACTCCAGAGAATGTTATGGATGTGGGGAGATTGGACATATTAGGAGAAATTGTCCCGGACCAAGTTATAAACCTCCAATAGCTAGAGGTAGGGGTGGTCATGGTAGAGGTCGTTATTCTGGAGGACGTGGTGGTCGAGGCAATGGTGGTCACCAAAACGGCAGAGGTAATGGGCAAACTGGGGCCACTACATCACAACATGGTAGGGGCAATGGACAGACAAATGATAGGGCCCATTGTTACGCTTTCCCTGGGCGGTCTGAAGCGGAGGCATCTGATGCTGTCATCACAGGTAATCTTCTTGTTTGTGATTGCATGGCTTCCGTATTGTTTGATCCTGGATCCACGTTTTCTTATGTATCTTCCTCATTTGCTAATGGTCTAAATTTACATTGTGAATTTCTTGATATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGGTAGTTGAAAAGGTGTATAGGTCTTGTCTGGTGAACTTTGTGGGGAGCAACACCTATGTAGATTTGGTTATCTTAGAAATGGACGATTTTGATGTGATTCTGGGTATGACTTGGCTTTCTCCGCAATTTGCAATCTTGGATTGTAATGCTAAAACGGTGATGTTAGCCAAGCCTGGGACAGACCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTCCGCATCGTCTCCTTTCTTCGTGCTAAGAAAATGATTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCGGTAGTTCGTGAGTTTCTGGATGTGTTCCCTGCGGATCTTCCTGGTATGCCACCGGATAGGGATATTGACTTCTATATTGATCTTGAACCCGGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCCGCGGAGTTAAGAGAGTTAAAAGCACAACTTCAAGAGTTATTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTGTTTGTAAAGAAGAAGGATGGGAGTTTTCGGATGTGCATAGACTACA</genome_strand>
        <mrna_strand>GCAAGGTAGGATGTAGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACTCAACTTTGTTTCAGTCCACAAGAGAGGATTCGTCGTTTTGTGAAAGGGTTGAGGTCAGAGTTGCGGATTTCAGCGTTACAGGTAGCGGCTACGGCAAAATCCTTGCAAGAAATGGTTGACTTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACCGTGACGTTAGCCAAGCCTGGGACAGATCTGTTAGTGTAGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATAACACTACCCAAGTACCTTCGATTGACTCAGTTTCAGTAGTTCGTGAGTTTATGGATGTGTTCCCTGCAGATCATCCTGGTATGCCACCGGATAGGGATATTGACTTCTGTATTGATCTCGAACCGGGCACACGCCCCATTTTTATACCCCCTTATAGAATGGCTCCCGCAGAGTTAAGAGAGTTAAAGGCACAACTTCAAGAGTTATTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTG-TTGT--A-AAG-A--TCGGCAGTTTTTGAATGTGCATAGACTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U317065" ref_strand="+" ref_description="SGN-U317065        Tomato 200607 #1 [3 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 3e-84, score=314)">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttagcaaatgaggaagatacantagaaaacgtggatcccaggatcaacaatacagaagccatgcaatcacaatcgaaagattacctgtgatgacagcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0116O16.1" temp_strand="-" temp_description="C06HBa0116O16.1  AC219211.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0116O16 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="11274" stop="9917"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10974" g_stop="10217" g_length="758"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="757" r_length="757" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0116O16.1" gen_strand="-" ref_id="SGN-U317065" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>758</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0116O16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U317065" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10974" e_stop="10217"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAATAACTCTTGAAGTTGTGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCGGGTTCAAGATCAATATAGAAGTCAATATCCCTATCCGGTGGCATACCAGGAAGATCCGCAGGGAACACATCCAGAAACTCACGAACTACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAATCATTTTCTTAGCACGAAGAAAGGAGACGATGCGGACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGGTCTGTCCCAGGCTTGGCTAACATCACCGTTTTAGCATTACAATCCAAGATTGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATCACATCAAAATCGTCCATTTCTAAGATAACCAAATCTACATAGGTGTTGCTCCCCACAAAGTTCACCAGACAAGACCTATACACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGAAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGAT-CCAGGATCAAACAATACGGAAGCCATGCAATCACAAACAAGAAGATTACCTGTGATGACAGCATC</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAGCAAATGAGGAAGATACANTAGAAAACGTGGATCCCAGGATC-AACAATACAGAAGCCATGCAATCACAATCGA-AAGATTACCTGTGATGACAGCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335937" ref_strand="+" ref_description="SGN-U335937        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 3e-30, score=135)">
      <seq>gatctgtcccaggcttggctaacgtcacagttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaagtctacataagtattgctccccacaaaagtcaccagaccagacctatatactttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagcaattcataatttaatttaagaccagtagcaaatgaggaagatacatatgaaaatgtggatccagggtcaaataatacaaaagccatgcaatcacaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0116O16.1" temp_strand="-" temp_description="C06HBa0116O16.1  AC219211.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0116O16 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="10871" stop="9939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10571" g_stop="10241" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.900"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0116O16.1" gen_strand="-" ref_id="SGN-U335937" ref_strand="+">
        <total_alignment_score>0.900</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0116O16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335937" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10571" e_stop="10241"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTCTGTCCCAGGCTTGGCTAACATCACCGTTTTAGCATTACAATCCAAGATTGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATCACATCAAAATCGTCCATTTCTAAGATAACCAAATCTACATAGGTGTTGCTCCCCACAAAGTTCACCAGACAAGACCTATACACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGAAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACGGAAGCCATGCAATCACAAACAAG</genome_strand>
        <mrna_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCATAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCACAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335935" ref_strand="+" ref_description="SGN-U335935        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|49533772|gb|AAT66771.1| putative polyprotein [Solanum demissum] (evalue: 2e-78, score=295)">
      <seq>tcaatgcgaggaagaggatacttgttcttaatagttaccttgttcagttgtctgtagtctatgcacattctaaaacttccatccttcttcttcacaaataaaactggagcaccccaaggagatgcacttggtctaatgaagaccttgctcaacaactcttgaagttgagcctttaactctcttaattcggcgggagccattctataagggggtatagaaatggggcgtgtgcctggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcaggaaacacgtccaaaaactcgcggactaccgaaaccgactcaattgagggtacttgagtagtgtcatccttgagatgtgccaagaaagctgaacaccctttactaaccattttcttagcacgaagaaaggatatgatacgcaccagattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaacgtcaccgttttagcattacaatccaagatcgcaaaatttggagaaagccaagtcatacccagaattacatcaatgtcacccatttctaaaaaaccaaatctacataagtgttgctccccacgaaattcnacaaaacagaactatgtaccttttcaactaccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0116O16.1" temp_strand="-" temp_description="C06HBa0116O16.1  AC219211.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0116O16 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="11343" stop="10085"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11043" g_stop="10385" g_length="659"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0116O16.1" gen_strand="-" ref_id="SGN-U335935" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0116O16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335935" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11043" e_stop="10385"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATGCGGGGAAGAGGGTACTTGTTCTTAATAGTTACTTTATTCAGTTGTCTGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAATAACTCTTGAAGTTGTGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCGGGTTCAAGATCAATATAGAAGTCAATATCCCTATCCGGTGGCATACCAGGAAGATCCGCAGGGAACACATCCAGAAACTCACGAACTACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAATCATTTTCTTAGCACGAAGAAAGGAGACGATGCGGACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGGTCTGTCCCAGGCTTGGCTAACATCACCGTTTTAGCATTACAATCCAAGATTGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATCACATCAAAATCGTCCATTTCTAAGATAACCAAATCTACATAGGTGTTGCTCCCCACAAAGTTCACCAGACAAGACCTATACACCTTTTCAACTACCAC</genome_strand>
        <mrna_strand>TCAATGCGAGGAAGAGGATACTTGTTCTTAATAGTTACCTTGTTCAGTTGTCTGTAGTCTATGCACATTCTAAAACTTCCATCCTTCTTCTTCACAAATAAAACTGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACCTTGCTCAACAACTCTTGAAGTTGAGCCTTTAACTCTCTTAATTCGGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCTGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGAAACACGTCCAAAAACTCGCGGACTACCGAAACCGACTCAATTGAGGGTACTTGAGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTGAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGATATGATACGCACCAGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAATGTCACCCATTTCTAA-AAAACCAAATCTACATAAGTGTTGCTCCCCACGAAATTCNACAAAACAGAACTATGTACCTTTTCAACTACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326740" ref_strand="+" ref_description="SGN-U326740        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: ATMG00860.1 | Symbol: ORF158 | hypothetical protein | chrM:235916-236392 FORWARD | Aliases: ORF158 (evalue: 2e-15, score=79.3) genbank/nr: RNA-directed(evalue: 2e-101, score=370)">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttcaactgccggtagcctatgcacatccgaaaactccaatccttcttctttacaaacaaaaccggagcaccccaaggagatgcagttggtctaatgaagcctttgctcacaactctttgaagtggtcttttaactctcttaactctgcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0116O16.1" temp_strand="-" temp_description="C06HBa0116O16.1  AC219211.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0116O16 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="11863" stop="10551"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11563" g_stop="10851" g_length="713"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="712" r_length="712" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0116O16.1" gen_strand="-" ref_id="SGN-U326740" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0116O16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U326740" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11563" e_stop="10851"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGACGGTAGTAGCTAGCTAACCCTACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTCACCCAATTCTTCACTGTCTCAACCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGTCCCAAGAATGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTGAAATGCACTTCATGTTCCTTCTTGCTCTTTGAGTATACTAATATATCATCAATAAACACGATCACGAAGAGGTCCAAATATGGTTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTTAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCGCAAATCAATCTTAGAGAAGACACAAACACCTTGTAACTGATCGAACAAGTCATCAATGCGGGGAAGAGGGTACTTGTTCTTAATAGTTACTTTATTCAGTTGTCTGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAATAACTC-TTGAAGTTGTGCTTTTAACTCTCTTAACTCCGCGG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGCCTATGCACATCCGAAAACTCCAATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCAGTTGGTCTAATGAAGCCTTTGCTC-ACAACTCTTTGAAGTGGT-CTTTTAACTCTCTTAACTCTGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U345909" ref_strand="+" ref_description="SGN-U345909        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: beta-galactosidase(evalue: 1e-29, score=133)">
      <seq>ctacatctcctaccatacaatgcttcaaatggagccatatcaatgcttgattgatagctattattgtatgaaaactccgctaagggtaggaagctatcccaatgaccaccaaactctatcacacacgcacgaagcatattctccaacacttgaatcgttcgctcagactgaccatcgggagaactagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0116O16.1" temp_strand="-" temp_description="C06HBa0116O16.1  AC219211.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0116O16 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="13344" stop="12567"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13044" g_stop="12868" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0116O16.1" gen_strand="-" ref_id="SGN-U345909" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>177</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0116O16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U345909" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13044" e_stop="12868"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACATCTCCTCCCATACAATGCTTCAAATGGAGCCATATCGATGCTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAAGAAGCTATCCCAATGACCACCAAACTCTATCACACATGCACGAAGCATATCCTCCAACACTTGAATCGTCCTTTCAGACTGGCCATCG</genome_strand>
        <mrna_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGATTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATTCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U323642" ref_strand="+" ref_description="SGN-U323642        Tomato 200607 #1 [6 ESTs aligned] arabidopsis/peptide: | Symbol: None | haloacid dehalogenase-like hydrolase family protein, low similarity to genetic modifier (Zea mays) GI:10444400; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase | chr3:3433133-3436284 REVERSE | Aliases: F9F8.21(evalue: 1e-134, score=476) genbank/nr: gi|18399067|ref|NP_566385.1| haloacid dehalogenase-like hydrolase family [Arabidopsis thaliana](evalue: 1e-132, score=476)">
      <seq>tggaggccactcgcagttgctctcaggctcacctccctttacaatccatctctttccctcctcaattctacaaaaagttccaattcacgaaatcgaagccttccaactctcatccacgcttggtgattgcaaaggccttggggaccggcgataatggtgactttgaacattttacagctacacctaacaagatttttatggaagaggcaattggtgctgaatacggagaaggtttcgagacatttagacccaatggactgctcaaagttgatgtggattttttaaatgatagactgcaagagggtttcctgcgaagaatccgttatgcgatgaagcctgatgaagcttatggcctgattttctcttgggataatgtggtggcagattctcgagctctgatgttggatgcctggaatcaacttgcctctgaagaaggattagagcttcctgaagatgatagtgtgcagcggctgttactttatgcaactgctgaccatattctgcataaggcgctggcaggggagaagaatgaagctgatcaagatagattgaagacgagactttcccatctctatcaggacaagcttctcaaaatttcagagccaattgaagggttaaaagaatggctggatgctgtatcaactgctcgtatcccttgcgctgttgtgtcaagttttgatcgcagaaatatggttgaagccttagagcgcatgggactcatgaagtacttccaggcaattgtgacggaggaggacggaatggagtctatagcacatagatttctttctgcagctgtgaagctggacaggaagccatcaaagtgtgtggtatttgaagacgatcctaggggcataactgctgctcacaactgtacaatgatggctgtggcacttattggtgctcacccagcgtacgatttagggcaagctgacctagctgtaggtagcttcagtgagctttctgtgataaatctcaggagattatatgcacataaaggctccaactttatggacctagagaagcaaatagcggaaaaagcaccgcgcagaaggaagctcacaattgacaccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0116O16.1" temp_strand="-" temp_description="C06HBa0116O16.1  AC219211.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0116O16 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="26689" stop="18463"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26389" g_stop="26301" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26300" i_stop="26226" i_length="75">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26225" g_stop="26109" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="206" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26108" i_stop="23200" i_length="2909">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23199" g_stop="23131" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="275" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="23130" i_stop="23020" i_length="111">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="23019" g_stop="22915" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="380" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="22914" i_stop="21906" i_length="1009">
            <donor d_prob="0.938" d_score="1.00"/>
            <acceptor a_prob="0.487" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21905" g_stop="21851" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="435" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="21850" i_stop="20695" i_length="1156">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="20694" g_stop="20621" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="436" r_stop="509" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="20620" i_stop="20201" i_length="420">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="20200" g_stop="20117" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="510" r_stop="593" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="20116" i_stop="20044" i_length="73">
            <donor d_prob="0.885" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="20043" g_stop="19903" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="594" r_stop="734" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="19902" i_stop="19819" i_length="84">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.884" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="19818" g_stop="19753" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="735" r_stop="800" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="19752" i_stop="19337" i_length="416">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="19336" g_stop="19227" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="801" r_stop="910" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="19226" i_stop="18925" i_length="302">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="18924" g_stop="18763" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="911" r_stop="1072" r_length="162" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0116O16.1" gen_strand="-" ref_id="SGN-U323642" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1072</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0116O16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U323642" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26389" e_stop="26301"/>
          <exon e_start="26225" e_stop="26109"/>
          <exon e_start="23199" e_stop="23131"/>
          <exon e_start="23019" e_stop="22915"/>
          <exon e_start="21905" e_stop="21851"/>
          <exon e_start="20694" e_stop="20621"/>
          <exon e_start="20200" e_stop="20117"/>
          <exon e_start="20043" e_stop="19903"/>
          <exon e_start="19818" e_stop="19753"/>
          <exon e_start="19336" e_stop="19227"/>
          <exon e_start="18924" e_stop="18763"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGGCCACTCGCAGTTGCTCTCAGGCTCACCTCCCTTTACAATCCATCTCTTTCCCTCCTCAATTCTACAAAAAGTTCCAATTCACGGTTTGTTCATTCAATTTAAATTTTCATTCACAGTTTTCGTTTTTATTTCTTTATTTATTTCAATATTCTTACCAGAAATCGAAGCCTTCCAACTCTCATCCACGCTTGGTGATTGCAAAGGCCTTGGGGACCGGCGATAATGGTGACTTTGAACATTTTACAGCTACACCTAACAAGATTTTTATGGAAGAGGTAAGTATTTTAGTGAACTTTTCAGCACCTATATTTTCTATCTGTTGCATCCATTTCTCTATCCATATTTATGAAGCAGAACTTCAGCTAAAATGATCAATTTTAAACTAAAATTTACATATTTTTTTTGGAAGTTTGTTTATTGTTGAATGGTTGAGACATATGAGTAACAACTGGGAGGCCTCAAATTGAGTCCTATTTATATGACTTATTGTTAACCGTGTGCTTTAGCCTCGCTACTTGGTACCTAACCTCATTGGATGTGACATGTTGCCCACTGAATACTTGATATTGGCCTAGGCGCTATCATAAGTTTAATAAATATCAAGTTTTTTTTTTTTTTTTTTGAGGCATGGGTAACTTTGTATTCAATAAACTCATCATACTAGAAATGATGAGCAAGAATCTTCACCTACCAAAAGTATGGGAATTCCTCCAAGAGGACCGCAAAAATAGAAGAACTTTACAAGTTACCTATGAAGTCATTTAGTGCTACTATATCCCAACTCTTGTTTACACCAAAAACATAGTAGAGTTATCTTCTGAATGTTGATACCTTTCCTTCCGTAGTGTCCATCAGATGCATGCATGAATCATCATCTACCAATTTTCCTTTGACCATCTATTACCAATTCCTTTCCAACTGTTAAGCAACTACACAGTGAACTTCGGCATCACCCAACTGACCCCAAGAATATTGGAGAACATGTCCCATAGCTTTGTGGCTGTTTTGCAGTGCAGGAACACATGAATGACAGGATAGTTGCTCTCTGCATCTTGATCACACATAAAACATCTTGAACAGATCTGTATTCCTTTTTCTTGAAGCACTTCATGGGTTAGACATGATGTCCTAATTGGCAACCATACAAAACAAGGGACTTTGGGGGGTTTGTGACCTTCCAGATTTCTTCCAAGCCAGAAGCCTGTAGTGGACTGACTATTCTTCTTCTTTCAGTAGCAAGATTTAACTGTAAAAATTCCTTTGTTGTGGAGCATCTAGACAGGTTTGTCGGCTCCTAGGAGACAGAGTCAACAATTGAAGGATTCTTGCAATCTATGATACTTCCCAGTCATTTGTAGCTCTCTTGAAAACCAAATTTATCCTTGGGGAGTCCAAACTTGTGACACTGAAGCATTTCTTTGTGAAGATAGGACATATAACTGAGGAAACAGAGTTCTCAGATTGTTTTCCTCTATCCAGAGTTCATTCCAGAAATCTATTCTTACCCCAAACAGGACAACCAAAAGTACCCCAAACCTCCTTAGTAGACCATTGGCTTAGCAAACCATATTTCTCAGGAATAAATCTTCTCCATAGAGCTATGTCATCTGTGCGAAATCTCCAGAGCCACTTGACCACTTTTGTAGTCGGGACTCATTTTGGATGCTAAGGATTTTTTATCCCTAACCGCCTTGATTCCTTCTGAGTGTGAGGGTATCCCATTTAATTAGTTGTACCCTCTTTTCTCCTTACTTCCTTGCCACAAGAAGGATTTCCTTAACTTGTTCATCTTCTTTATACTCTTGGGATTTGTGAGCAAGCTCATCATATAAATAGGGTTGGCGTCCATTACTGATTCGATGGGTGTCAACCTGCCTCCTAACGATTGATATTGTTTCTTCCACCTAGATAGTTTTATGCCACTTCTCTCCAAGACTTCATTTCATACCACATGCTCTTTGTTTTGGCTCCCAAAGGTAAACCAAGATATTTCATTGGAAGAGGATCAATCTGGCATCCAAGAGTATCCGCTAGTAATTTGCAAGTTGTCTACCTGATTGAGAGGGTGGATAAAAATCTTATGCCAATTAACATGCATTCTGGAAATGCCTTAAAAAATAGTTAGGGTGTCTCTAAGGTGTCTCATCTGAGATACATTTGCATCACAAAAAACTAGTGAGTCATTAACATATGATAGGTGAGTAACTTCCATAGCAGTAGACCTGTTAGGTGAAGCATAAAAACCCTCAATCCACCCATTCCTCTTTGCCATTCTGATCATGTGGGTTAAACCCTCCATGGCTAAAATGAAAAGGAAATGAGACATGGGATCTTCCTGTCTGGAGCTCCTTTGTGACTGGAAAAAACCTTCATTGCTACCATTTATGATGAGGGAGAACTTCACAGGGGATGTATAATAATTGATCCAGTTAATCCATTTGGTACCAAAATCTATATCCTTCGCCCTTTGGAACTTTGAGGAGGTAGGACTAGGACTAGTTAACATTATCATAAGTGCACAAATTTCTGGAGTCTTCTGTCCGACCATAGAATCCACCAACTCATTGGCTAGCAGAATTGCATCCATAATTTGTCTACCCTTCAGAAAAGCCATTTGATGTTCATCTACTTGCTTTCCCATGATAGTTTTTAACCTTTCAGTGATAAGTTTGGAGATGATCTTGTAGACTCCTCCTATCCGATTAATTTGCCTGAGATTCGTCAGCTCTCCTGCTACTACCTTCTTTGCTATAAGTGCTATGAAAGTGGCATTTAATGACTTCTCAAAAACTCCCTTTTGATGATTGTTCTGAATGGTATGCATTAAGACTCCTTGAGAATGCCCCAACAGTCTTTGACGAATCTTACCATCAACAGTGAAGCCATTAGGTCCGGGTGCTTTGTCACCATCACATTGCTTTACAACTTGGAGCACTTCTAATTCCGAGAATGGTGAGAAAAAGTTCTGAGTGATTTTAGGGGGATGGAGTAGTGCCCTGTTTCAACCAAAGTTCCGCTCTAGGCCCTGCTATTCCATTGTACCATAAAAACACTAACTTATTGTATTTATAGTTTAAAAATTTTAGAAAAATGTTTGAAGAACACTTCTGAGTTCCAGATAGTGATTTTTGTTGCTAAAAAAGGGACTGACAGCATATTTGTTTGTGTTTATTGGATTTTGTAGGCAATTGGTGCTGAATACGGAGAAGGTTTCGAGACATTTAGACCCAATGGACTGCTCAAAGTTGATGTGGTAAGACCAGAAGTTTAGATTTTGTAACAGGGTTTATGAATCTTTGCACCTTTTGTTTCTACAGGGCAACATATCTGTACTCAAGGAGTTTTTTTTTTTTTTTTCATTTAGGATTTTTTAAATGATAGACTGCAAGAGGGTTTCCTGCGAAGAATCCGTTATGCGATGAAGCCTGATGAAGCTTATGGCCTGATTTTCTCTTGGGATAATGTGGTGGTAAGACCTCAATGATCTGGTCTAATTCTAAGAGAGGTTTTCCTGATTTGTGAACTGTTACTTGATCTGTGTTCAACTGTATAAATGAACATGGTCTCTGAAGCTTGGCTGGCAGTTTGTTATGTCCATATAAAAGGAAGTAATCTTTTGTAGTTGGTTTGCCCTGTGTTTGTGCATCTTGTTCCCGTATATAATTGCATGCTAATGAGGAATTCTTGAAGGGTGCTGGTTTTGTTACATTCAGGTCTAACGTCTGAATCTTTGATGACCTTGCCTTACAAACTCAAAGCCTTCATTTGTGCATCTTTTTTCTTGCTCTCCAATTTGGTCTTATATGGGATACCTTTCTTAAATAAATAAGGTGTCAAAGACAGATTAAGGAACTTCACTCTGTGTCTCTCTTCCCAAGTGTGTGTGTCTCTGTGTGTGTGTGTGCGCGCGCATATATATGTCAAGGAACTTTCGTCTAAATACAACATGAATTGGAATAAACCGTAATAGAAGTACAAGATCCCCAAATTATGGCGTTTCATCACTCACCCTAGGAATTGATGCTTTAAGATAGCAACAACAAAAACGTCCAGTTTCAAACAAGTTGAAGCTTCATTATATGACTACTAAAGAGGAGAGGTGGCTTGTTTCGTATTAGGTGCATGGATTGGAACTTAGACAAAAGGCAACAAAAACTTGGGGTTCATGTTAAGAAAGAAGATCTTCATAGAAGAGAAAAGAGAATTATATGGATACGTGCAATGTATATCTTAAATCACATATCTGTATATTGATATATTTTTTTTTGGGGGTGGTGGGGTGGGGGGGAGATAAGATTAATGATTGATTTCCTTTAAACATGTTGCTGAAGATAATTGTAGACCAAAGATGTGGTAGATATTAATGTTTCCATAATGAAGCTGGCAGCAATTGTGTTGCTGAGTTCTTTCTTCTACTTGAGTGGAAGTCAAACACTCAATTCTTTGTTGATAATGCACTTCCACATCATACATCTCAGGCAGATTCTCGAGCTCTGATGTTGGATGCCTGGAATCAACTTGCCTCTGAAGAAGGTGAGTGACTTGCCGATTTTTGTGGCTCTGAGTAATTGAACTTCTTCACTTGAGCTGCATGCAAATATCAATATTATTTCAGCTGTACAGCATTAGCCAATCTGAGGGATTGAATTACCTATGTTGCTCGGACTCTTCTAAAATGTCGATGGGTGCATGTTGGATCCTCCCAAAGTAGTACATTTTGGAGGATCCCACAGGGGTGCGGCAGCATTTTCAGAATCATACATTTGTTTCCTATTGGTCATACAGTAAAATTATTTGCTCTTCATATATAATTGAAACAACTGGAGTGCCAGGGACATGTCATCTGTACATAATCTTGGATCTTATTGGTATTTTTTAGTATCTCCATATATATTTGAGACAGTGAGAGTGGTAACTGTAATATTTTTCAACTTTTAGTGAGAATCATTAATCTGGCTCTATCAATCCAAATATACATATATCAGAGATCAGGGTGATAATTGGCTTTAACTGAATGGAATTCTCAATCTTAGGGGAAGGGACTCTGGGATCTAGAAATAAAGAGTGATTAATCTACCTCATTCTCCCCCAAAAGATAATTGATGAGTATTCGATGATGAGCTGTCTCGATGTTCATCCCGTGGAAAATGAACCCTTGTTAGAAACTTATGGTCTGCAATCATACAAGCAGCACAATCTCAAAGACCCGTAGGTTTGCAATTTTAAATAATTGGGAAGTTGTGATGTAAAACTAATCTTTGCAGTTTATGAGAGATAAGAACTAGCTAAAGACTGATCTTCTAACCTATAAAACAATGACTACTTTCCAGTTTGTAGATGCTCAATACTGATGCTTTTAGTTTTGATGACTACTTTCCTCAGTTTGTAAATGTTCATTACTGATGCTTTTATTTTGTTAAGTAGGGTTCTTTTGGTTGGGAACAAGTTACCAAGGATAAACTATCCCAGGATTAGCTATCTTGGGATAACTTATCCCACCATGTATATGGGATAACTTATCTCATCAGTCATCACAATGGTATAAATGGTGGGATAAGTTATCCCAAACATGGCAACCAAACAAGACACCAAAATCTTATCCCTGGACTATCTTCTTATCGCTGGACTATTTATTTTTATCCCTCACACCAAACGACCCCTTAAGTTATTTATAGTTTGGTTTGTGCAGGATTAGAGCTTCCTGAAGATGATAGTGTGCAGCGGCTGTTACTTTATGCAACTGCTGACCATATTCTGCATAAGGTTAAGATTAAATGATCATACAAGTCACGACTACCTATTTTATTTGAACAATGAGTGTGGATAAGTGTCCTTCCTTAATTTTTGTCCAAGTCTGTGGCCTATCAATCTTTCTCTCTTTTGTTAGATAAATAATTGTTAAATCCCCTCTGAGATATTTGCGTCTATATGCGTATGAGTCAGTGTACATGTCCTGTTGATTGGAGAAATAGTGGACTATCAGGTTTGAGTTTGCTTTTAGGAATCGTTGGGAGGTAAATTACAACAATTCTCTATAGAAAATCACCGAGATAAAATAGCATTGATTAAAAATAAAAAGGTCTCGCTTACTTGGGAGATCATTTTCTAGTTTTGTAGATCCTTTCTTATGTAATCAATGTCTTAATAAAATGTCTATATCTGAGAAATCTTATGCAATTACAGGCGCTGGCAGGGGAGAAGAATGAAGCTGATCAAGATAGATTGAAGACGAGACTTTCCCATCTCTATCAGGACAAGCTTCTCAAAGTAAAGCATTTTTGCAACATGAGATTTTTTGTTATTCATGAACTCAAAAACATCACTACAGTTCTCCTTTTAGATTTCAGAGCCAATTGAAGGGTTAAAAGAATGGCTGGATGCTGTATCAACTGCTCGTATCCCTTGCGCTGTTGTGTCAAGTTTTGATCGCAGAAATATGGTTGAAGCCTTAGAGCGCATGGGACTCATGAAGTACTTCCAGGTAGTTAATTACATTCTCTTAGAGTTAATATCTACAATGTGGTTGGCTATTATCAGGTGCATGACCGTCATGCTGTTGACGCAGGCAATTGTGACGGAGGAGGACGGAATGGAGTCTATAGCACATAGATTTCTTTCTGCAGCTGTGAAGGTAAGGCTGAAGTGTATTTTGACTGTTGGACTAGTGCATTTCTAACACGTCAAGAATACTAAATCATAGTAAACAACTGTCTCATTTGGATTCTTTGGGGATGGGGGCTGCTTTTAGCACATTTTATTTCTTACTTGCATATGAGGGAGAATAATATCTAGAAATGTGGTGCGTGTACCAAAATGCTTAATTTTCTCTTTTAAAAAGGTGTGTCAGTTCCAATTTTTTGTTTATACTTACATCTGCATGGAATACTAAATCCTAGCAATATTGACCTGCTACACCACTCAAATGATAGATTAACTATATACATTATCTACACTTTCCTCTATGCTTTTTAAGCGCGGACAAAAACATAACTTTGAACTCTATTGGTTTTGTTGGATCTTACCTATTGCAAAAACTAAATTCTGCAGCTGGACAGGAAGCCATCAAAGTGTGTGGTATTTGAAGACGATCCTAGGGGCATAACTGCTGCTCACAACTGTACAATGATGGCTGTGGCACTTATTGGTGCTCACCCAGCGTATGTATCACTGTTTTTCTGGTTTTACCCCTTATTGTTGAAGCTCTTGATTTGAACTGTCTTATTGTATCATGTTTGGACACGAAATGTCTTTGCTGCCAAAAAGGAGTCCCAGACCCTTCCTCCCTCTAAAGAGGTTGGTGGGTGGGTTTAGGACTAGGTGCTTACTTCAATATCTGTGTGAAGTGTTGATATATTGATACAAGTTCTGGATTTTCTTGCTATTTTAATTTTCTTCAAATGCAGAAAGTGTGTCACTGATTCTGCTTGCAAATTTTTATTTAGGAGTTTGAAACTTGCAGGTACGATTTAGGGCAAGCTGACCTAGCTGTAGGTAGCTTCAGTGAGCTTTCTGTGATAAATCTCAGGAGATTATATGCACATAAAGGCTCCAACTTTATGGACCTAGAGAAGCAAATAGCGGAAAAAGCACCGCGCAGAAGGAAGCTCACAATTGACACCAT</genome_strand>
        <mrna_strand>TGGAGGCCACTCGCAGTTGCTCTCAGGCTCACCTCCCTTTACAATCCATCTCTTTCCCTCCTCAATTCTACAAAAAGTTCCAATTCACG...........................................................................AAATCGAAGCCTTCCAACTCTCATCCACGCTTGGTGATTGCAAAGGCCTTGGGGACCGGCGATAATGGTGACTTTGAACATTTTACAGCTACACCTAACAAGATTTTTATGGAAGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATTGGTGCTGAATACGGAGAAGGTTTCGAGACATTTAGACCCAATGGACTGCTCAAAGTTGATGTG...............................................................................................................GATTTTTTAAATGATAGACTGCAAGAGGGTTTCCTGCGAAGAATCCGTTATGCGATGAAGCCTGATGAAGCTTATGGCCTGATTTTCTCTTGGGATAATGTGGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGATTCTCGAGCTCTGATGTTGGATGCCTGGAATCAACTTGCCTCTGAAGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTAGAGCTTCCTGAAGATGATAGTGTGCAGCGGCTGTTACTTTATGCAACTGCTGACCATATTCTGCATAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCTGGCAGGGGAGAAGAATGAAGCTGATCAAGATAGATTGAAGACGAGACTTTCCCATCTCTATCAGGACAAGCTTCTCAAA.........................................................................ATTTCAGAGCCAATTGAAGGGTTAAAAGAATGGCTGGATGCTGTATCAACTGCTCGTATCCCTTGCGCTGTTGTGTCAAGTTTTGATCGCAGAAATATGGTTGAAGCCTTAGAGCGCATGGGACTCATGAAGTACTTCCAG....................................................................................GCAATTGTGACGGAGGAGGACGGAATGGAGTCTATAGCACATAGATTTCTTTCTGCAGCTGTGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGACAGGAAGCCATCAAAGTGTGTGGTATTTGAAGACGATCCTAGGGGCATAACTGCTGCTCACAACTGTACAATGATGGCTGTGGCACTTATTGGTGCTCACCCAGC..............................................................................................................................................................................................................................................................................................................GTACGATTTAGGGCAAGCTGACCTAGCTGTAGGTAGCTTCAGTGAGCTTTCTGTGATAAATCTCAGGAGATTATATGCACATAAAGGCTCCAACTTTATGGACCTAGAGAAGCAAATAGCGGAAAAAGCACCGCGCAGAAGGAAGCTCACAATTGACACCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U324856" ref_strand="+" ref_description="SGN-U324856        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: | Symbol: None | hypothetical protein | chr5:1577290-1578834 REVERSE | Aliases: K18I23.13, K18I23_13(evalue: 2e-21, score=100) genbank/nr: gi|15239073|ref|NP_196152.1| hypothetical protein [Arabidopsis thaliana] gi|10176745|dbj|BAB09976.1| gene_id:K18I23.13~unknown protein [Arabidopsis thaliana](evalue: 1e-19, score=100)">
      <seq>gagagagacccattattcaatgatgtaccaagctagaacaaggaaaagggtttttggtatccaaatacatcgtggtcctgatggcagtgcttttcaaaaatgtgaaacatgtggagtctcagtggctattgcgttggctgacatgcatgaatgtgaacccagaaaaaatgtaaagaaattgaaatgccaacccaggagcagaaccattgttaaggggaagaggcttattcaccaacccagatcggcttttcgaattttcatggaggattttgtgaagaaaaacattgacggaaatgagtttgaagttgataacagaggtttcgagacgtggaaaaacatgacacgtaaggagaagattttgtacttcatgaaagccgagataattaatcttgcacatgtgaaacttttgcacaaagaggagaatgatatgctatggagggtggatgacgaggcagattcagctgatgttggcaagtatgatgagaactatgaaaactatgatcattatgattctgaatcttcttgggatttgattgattttggcctgaagtagacaagaggtttgacaccagtgagagggagggtttgttcccttgaagggctggtgtaaaatcttgaggattgaacatcattttgatttttggaggggttccatgctttggactaacggaacatttatgtcagtggctggcatctgtttttgtgcagaagccttgtcgattcctaccttatttaaggcaagtcaggttggttggctactgcgcgtagtatttgttactataggagttaagatattgaacctcgtaaacaatcccactcgataatcttcagtgatgcatttcttgagatcagccaggagccttgtgtaggatggttttttgtgaagtttcttgtttgatttgtaggcttcctacttgtggaatagggcctttgtgtacagtctcaatgaaatgagaagtgctgatttttgcccagctatttatggggatagtttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0116O16.1" temp_strand="-" temp_description="C06HBa0116O16.1  AC219211.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0116O16 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="42062" stop="38466"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41762" g_stop="41661" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="102" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41660" i_stop="41578" i_length="83">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41577" g_stop="41419" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="261" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41418" i_stop="40935" i_length="484">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="40934" g_stop="40847" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="349" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="40846" i_stop="40703" i_length="144">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="40702" g_stop="40613" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="350" r_stop="439" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="40612" i_stop="39537" i_length="1076">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="39536" g_stop="39492" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="484" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="39491" i_stop="39393" i_length="99">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="39392" g_stop="39298" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="579" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="39297" i_stop="39185" i_length="113">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="39184" g_stop="38769" g_length="416"/>
          <reference_exon_boundary r_type="cDNA" r_start="580" r_stop="995" r_length="416" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="996" polyA_stop="1005"/>
      <MATCH_line gen_id="C06HBa0116O16.1" gen_strand="-" ref_id="SGN-U324856" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>995</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0116O16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U324856" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41762" e_stop="41661"/>
          <exon e_start="41577" e_stop="41419"/>
          <exon e_start="40934" e_stop="40847"/>
          <exon e_start="40702" e_stop="40613"/>
          <exon e_start="39536" e_stop="39492"/>
          <exon e_start="39392" e_stop="39298"/>
          <exon e_start="39184" e_stop="38769"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAGAGACCCATTATTCAATGATGTACCAAGCTAGAACAAGGAAAAGGGTTTTTGGTATCCAAATACATCGTGGTCCTGATGGCAGTGCTTTTCAAAAATGGTACAATACTACTTTTTTTTCCCTCTTTCTGATGAATAATTTATGTAGGTTTTTTCGATTGTGTAATGTGGGTGTATTTGCAGTGAAACATGTGGAGTCTCAGTGGCTATTGCGTTGGCTGACATGCATGAATGTGAACCCAGAAAAAATGTAAAGAAATTGAAATGCCAACCCAGGAGCAGAACCATTGTTAAGGGGAAGAGGCTTATTCACCAACCCAGATCGGCTTTTCGAATTTTCATGTTTGTTGCCTCTTATCTTTCTCTTTAGATACTTATTTGAATGTATGAGTTTAGATAGGCTTGTTTAGTATAGGCATAATGTATAAACAATGTCCCTTAACTTGCTCAAATACACATTTAAATTTATATAAACGTGTCCTACTATGACATGATACAAATAAATTGTCATTTAGCACGGGTATATTTCACGCAAATTGCCATGTAGGACATGTATATTTTACGCAAATTGTCATATAGGAGCGTGTGTTTATTTGTGCTAATTGTACACATGTTTAAGTACACACCCAATTTAAGGGATATAGATGTTCAATTTAAATGGTATGTTTATGTATTTTGCCTTCAACATATTCAATGTGTGTGCCAAATACGTTAAAGAATAACCATGTTGCGGATATCTATTTAATTTGTTTAGTATGTTACTATTATGTGTGTAAAGAAAAAATGTCGTCTTAAGTGTCATGGCCTCACGCGTTTGGTGTTGCAGGGAGGATTTTGTGAAGAAAAACATTGACGGAAATGAGTTTGAAGTTGATAACAGAGGTTTCGAGACGTGGAAAAACATGACACGTAAGGTACCAGTTTGTTTGGTACTTTTAGTTGTTTATTTGAGCTTTTGGCAATATTTTTTTTTATCAAACAATGCTAGCTAATCATGTTTCATCACCCATTAGTTCATTGAAGTGTTTATTAATGTAATTGAACTGAAAAAATTTCAGGAGAAGATTTTGTACTTCATGAAAGCCGAGATAATTAATCTTGCACATGTGAAACTTTTGCACAAAGAGGAGAATGATATGCTATGGAGGGTAATCTGCATGTTGCATTTCTTTGTTCCGCTACTACTGCTTATTCCTTGAATGATCATTAATTGTCACTTTAGATATTGTGCTCGTAAATGGACTCTGCTGGCTGGTGATGCATTTCCTTGTTCCATATTGTATGACGTCCTTTTCCGAATTTCCTATAGTAATTTCAATTTTCTATTCAATTCAAAATTCAAATTGAAGTATGATACTTTTCTGATATCTGATAATTCTATATCGGGAACCACAGGGCTAAATGTCATTTGAAGATTCCCAAATTTCAGCCTTAATTGAACTTCCTGAGTTTTCTGAAATGAAGAATTCGTTCTGTTAAGAAGTTGATGGTTTTTCTGTTTCAAAGCTTGGAAAACATGATGAAGTTACAGTCTTGCTAATCCAGTAACAAGATTCTCTAGCAGAGGACATAGATTCCTTAATGACATTATATACAATACTGATCATGTATGGATAAAAATAGTCCGGATTCCAGAATTGTTTTTTCATACTCATTATCTGCAAATACTATTAGTCTCTCGAGCAAACATACTGGACTCTCTTAAGAATAAACATTTGCCTTAGATGACCATCTAAGCGAACAGTTCTGCGTATAGATTTCCACACAGAAACTAGATTACCAAGTCCTATATCTACTGAAGACATCAGGAGCTTAATGCTACTTCAATTGTGGAAGTTTTATACCTAAAGCTCATAATGCTCTTTTTGTATTTATTTGCTCTCTTATATTACCTTTGCTTGCAAATTTTTAAAAGCATTATACTGTGATCTGTTTGATAAACTACAAGTTCCTTGTGGATAATGCTTCTATCTTTCTGATTCCCTGTTTAGATGCTTAACTATAAATTACAGGTTTCCGGATACTGTAAATGACATAACATCTTATATCTATTGATTCTATTAGGATATTTATATATGGCTTTAACATTTGAAATGTTTCTTATCTGACATGCTTGATGAGTAATAAGTTATCATTTGCAACAACGCATTTGGTCCCTTCCATTCAAATGCTTAACTTTCAAGTACAAGTTTTAGAATACTGTAAATGACATTTGCAACTATAGGTGGATGACGAGGCAGATTCAGCTGATGTTGGCAAGTATGATGAGGTTTGTTCCTTTGCTTCTTGATTCCTCTAACTTTAGTGATTTAACTGAGTGCTTTACCAATTTGAATCTCAACCTGAATTGTTGTCTTTTTGTTACAAGAACTATGAAAACTATGATCATTATGATTCTGAATCTTCTTGGGATTTGATTGATTTTGGCCTGAAGTAGACAAGAGGTTTGACACCAGTGAGAGGGTAATGATTCTGTTTCTCACTTATTTTTGTGTGCTTGTATTTGGATATAGACTATATAATAGGCTCCTAATACTGCAACACAACTCTTCCTCTCTTTTTATTCTTTGAAACAGGAGGGTTTGTTCCCTTGAAGGGCTGGTGTAAAATCTTGAGGATTGAACATCATTTTGATTTTTGGAGGGGTTCCATGCTTTGGACTAACGGAACATTTATGTCAGTGGCTGGCATCTGTTTTTGTGCAGAAGCCTTGTCGATTCCTACCTTATTTAAGGCAAGTCAGGTTGGTTGGCTACTGCGCGTAGTATTTGTTACTATAGGAGTTAAGATATTGAACCTCGTAAACAATCCCACTCGATAATCTTCAGTGATGCATTTCTTGAGATCAGCCAGGAGCCTTGTGTAGGATGGTTTTTTGTGAAGTTTCTTGTTTGATTTGTAGGCTTCCTACTTGTGGAATAGGGCCTTTGTGTACAGTCTCAATGAAATGAGAAGTGCTGATTTTTGCCCAGCTATTTATGGGGATAGTTTA</genome_strand>
        <mrna_strand>GAGAGAGACCCATTATTCAATGATGTACCAAGCTAGAACAAGGAAAAGGGTTTTTGGTATCCAAATACATCGTGGTCCTGATGGCAGTGCTTTTCAAAAATG...................................................................................TGAAACATGTGGAGTCTCAGTGGCTATTGCGTTGGCTGACATGCATGAATGTGAACCCAGAAAAAATGTAAAGAAATTGAAATGCCAACCCAGGAGCAGAACCATTGTTAAGGGGAAGAGGCTTATTCACCAACCCAGATCGGCTTTTCGAATTTTCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGATTTTGTGAAGAAAAACATTGACGGAAATGAGTTTGAAGTTGATAACAGAGGTTTCGAGACGTGGAAAAACATGACACGTAAG................................................................................................................................................GAGAAGATTTTGTACTTCATGAAAGCCGAGATAATTAATCTTGCACATGTGAAACTTTTGCACAAAGAGGAGAATGATATGCTATGGAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGATGACGAGGCAGATTCAGCTGATGTTGGCAAGTATGATGAG...................................................................................................AACTATGAAAACTATGATCATTATGATTCTGAATCTTCTTGGGATTTGATTGATTTTGGCCTGAAGTAGACAAGAGGTTTGACACCAGTGAGAGG.................................................................................................................GAGGGTTTGTTCCCTTGAAGGGCTGGTGTAAAATCTTGAGGATTGAACATCATTTTGATTTTTGGAGGGGTTCCATGCTTTGGACTAACGGAACATTTATGTCAGTGGCTGGCATCTGTTTTTGTGCAGAAGCCTTGTCGATTCCTACCTTATTTAAGGCAAGTCAGGTTGGTTGGCTACTGCGCGTAGTATTTGTTACTATAGGAGTTAAGATATTGAACCTCGTAAACAATCCCACTCGATAATCTTCAGTGATGCATTTCTTGAGATCAGCCAGGAGCCTTGTGTAGGATGGTTTTTTGTGAAGTTTCTTGTTTGATTTGTAGGCTTCCTACTTGTGGAATAGGGCCTTTGTGTACAGTCTCAATGAAATGAGAAGTGCTGATTTTTGCCCAGCTATTTATGGGGATAGTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U344471" ref_strand="+" ref_description="SGN-U344471        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>gtctttttcttttttctgaattttctttttttgtttacagatcttctcctctcttgctgaattttcttccatgcgtttttgctgaatttttttcttcttcctttttttttgtatgtatatatatagtgtgtaagagtttatgtgggtgcgagggtgaatggagaggatcatggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0116O16.1" temp_strand="-" temp_description="C06HBa0116O16.1  AC219211.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0116O16 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="47127" stop="46353"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46827" g_stop="46653" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="175" r_length="175" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0116O16.1" gen_strand="-" ref_id="SGN-U344471" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>175</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0116O16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U344471" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46827" e_stop="46653"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTTTTCTTTTTTCTGAATTTTCTTTTTTTGTTTTCTGATCTTCTCCTCTCTTGCTGAATTTTCTTCCATGTGTTTTTGCTGAATTTTTTTCTTCTTCCTTTTTTTTTGTATGTATATATATAGTGTGTAAGAGTTTATGTGGGTGCGAGGGTGAATGGAGAGGATCATGGGA</genome_strand>
        <mrna_strand>GTCTTTTTCTTTTTTCTGAATTTTCTTTTTTTGTTTACAGATCTTCTCCTCTCTTGCTGAATTTTCTTCCATGCGTTTTTGCTGAATTTTTTTCTTCTTCCTTTTTTTTTGTATGTATATATATAGTGTGTAAGAGTTTATGTGGGTGCGAGGGTGAATGGAGAGGATCATGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U325071" ref_strand="+" ref_description="SGN-U325071        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr2:16079148-16081269 REVERSE | Aliases: T19C21.14, T19C21_14(evalue: 1e-23, score=107) genbank/nr: gi|3395435|gb|AAC28767.1| hypothetical protein [Arabidopsis thaliana] (evalue: 7e-22, score=107)">
      <seq>ttgaacgaacaaaggcgagtattagaatggctgaaatgagattacatgcagccaaaaagatggaagaagcagctaaagctgtggaagcaattgcttttgcggaacgaaaggctttactaaatggaaagaagtcttcaactgttgttcagcacacaactgagggcatcacaatttcatatgaagaatattatgctcttgcccgaaaagcacagcaagctgaagagctatgcaaaacaaaatttgtagacacaaacactatgcacagaactaatgaagcaaaccaatctgaggtgtctattacaaagaagatggaggagactaccaaagaaattagacacaaccggagtactctagaagaggctttggacaacgaagatggtactcaaagaagtcgtcttattgaacaagatggtttctacagggagagatcagaacacactcaattgcattactcggggcataatacctcagtcaaatctaagttcagaaaccctcagtcatctctcactagtcatgggaaccctcggctagctgatgacaacgaagcagacaatgtcaatgacaagtcagtcccagtctttcgatcatcaatatcaattggagacatactaagtaggaagctgattttgcgagatgatcatattgtcgtgggtaagcatatggaaagccacaccgaaagaaagcacgtgtcgtttagccaaatgttgagggaacagagtgggatcatattgaatcccacaaaagctatgaaagaaggggatgtacacaagcagtttattacacataagaagaagtttggtttcatccaagtaccacttcccagacagaataagaaaaagacacagcctttgaacatgagatgatctgcccttcctcttacatcagtcttatacttgtttactcggcttgcacatcttttcgatttttttttgcagtgtgtattatctgttgtgtttgtgatttgtgattactgagcgttgccgttttctcttcatgattggtgtaaagctcctcttgaagctaacgatcttgtgcatttttatggaaaaaacattgagacagaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0116O16.1" temp_strand="-" temp_description="C06HBa0116O16.1  AC219211.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0116O16 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="61940" stop="60275"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61640" g_stop="60574" g_length="1067"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1067" r_length="1067" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1068" polyA_stop="1088"/>
      <MATCH_line gen_id="C06HBa0116O16.1" gen_strand="-" ref_id="SGN-U325071" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1067</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0116O16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U325071" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61640" e_stop="60574"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAACGAACAAAGGCGAGTATTAGAATGGCTGAAATGAGATTACATGCAGCCAAAAAGATGGAAGAAGCAGCTAAAGCTGTGGAAGCAATTGCTTTTGCGGAACGAAAGGCTTTACTAAATGGAAAGAAGTCTTCAACTGTTGTTCAGCACACAACTGAGGGCATCACAATTTCATATGAAGAATATTATGCTCTTGCCCGAAAAGCACAGCAAGCTGAAGAGCTATGCAAAACAAAATTTGTAGACACAAACACTATGCACAGAACTAATGAAGCAAACCAATCTGAGGTGTCTATTACAAAGAAGATGGAGGAGACTACCAAAGAAATTAGACACAACCGGAGTACTCTAGAAGAGGCTTTGGACAACGAAGATGGTACTCAAAGAAGTCGTCTTATTGAACAAGATGGTTTCTACAGGGAGAGATCAGAACACACTCAATTGCATTACTCGGGGCATAATACCTCAGTCAAATCTAAGTTCAGAAACCCTCAGTCATCTCTCACTAGTCATGGGAACCCTCGGCTAGCTGATGACAACGAAGCAGACAATGTCAATGACAAGTCAGTCCCAGTCTTTCGATCATCAATATCAATTGGAGACATACTAAGTAGGAAGCTGATTTTGCGAGATGATCATATTGTCGTGGGTAAGCATATGGAAAGCCACACCGAAAGAAAGCACGTGTCGTTTAGCCAAATGTTGAGGGAACAGAGTGGGATCATATTGAATCCCACAAAAGCTATGAAAGAAGGGGATGTACACAAGCAGTTTATTACACATAAGAAGAAGTTTGGTTTCATCCAAGTACCACTTCCCAGACAGAATAAGAAAAAGACACAGCCTTTGAACATGAGATGATCTGCCCTTCCTCTTACATCAGTCTTATACTTGTTTACTCGGCTTGCACATCTTTTCGATTTTTTTTTGCAGTGTGTATTATCTGTTGTGTTTGTGATTTGTGATTACTGAGCGTTGCCGTTTTCTCTTCATGATTGGTGTAAAGCTCCTCTTGAAGCTAACGATCTTGTGCATTTTTATGGAAAAAACATTGAGACAGAAAAT</genome_strand>
        <mrna_strand>TTGAACGAACAAAGGCGAGTATTAGAATGGCTGAAATGAGATTACATGCAGCCAAAAAGATGGAAGAAGCAGCTAAAGCTGTGGAAGCAATTGCTTTTGCGGAACGAAAGGCTTTACTAAATGGAAAGAAGTCTTCAACTGTTGTTCAGCACACAACTGAGGGCATCACAATTTCATATGAAGAATATTATGCTCTTGCCCGAAAAGCACAGCAAGCTGAAGAGCTATGCAAAACAAAATTTGTAGACACAAACACTATGCACAGAACTAATGAAGCAAACCAATCTGAGGTGTCTATTACAAAGAAGATGGAGGAGACTACCAAAGAAATTAGACACAACCGGAGTACTCTAGAAGAGGCTTTGGACAACGAAGATGGTACTCAAAGAAGTCGTCTTATTGAACAAGATGGTTTCTACAGGGAGAGATCAGAACACACTCAATTGCATTACTCGGGGCATAATACCTCAGTCAAATCTAAGTTCAGAAACCCTCAGTCATCTCTCACTAGTCATGGGAACCCTCGGCTAGCTGATGACAACGAAGCAGACAATGTCAATGACAAGTCAGTCCCAGTCTTTCGATCATCAATATCAATTGGAGACATACTAAGTAGGAAGCTGATTTTGCGAGATGATCATATTGTCGTGGGTAAGCATATGGAAAGCCACACCGAAAGAAAGCACGTGTCGTTTAGCCAAATGTTGAGGGAACAGAGTGGGATCATATTGAATCCCACAAAAGCTATGAAAGAAGGGGATGTACACAAGCAGTTTATTACACATAAGAAGAAGTTTGGTTTCATCCAAGTACCACTTCCCAGACAGAATAAGAAAAAGACACAGCCTTTGAACATGAGATGATCTGCCCTTCCTCTTACATCAGTCTTATACTTGTTTACTCGGCTTGCACATCTTTTCGATTTTTTTTTGCAGTGTGTATTATCTGTTGTGTTTGTGATTTGTGATTACTGAGCGTTGCCGTTTTCTCTTCATGATTGGTGTAAAGCTCCTCTTGAAGCTAACGATCTTGTGCATTTTTATGGAAAAAACATTGAGACAGAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U340496" ref_strand="+" ref_description="SGN-U340496        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | zinc finger protein-related, contains Pfam profiles PF03108: MuDR family transposase, PF04434: SWIM zinc finger | chr1:23851419-23853578 FORWARD | Aliases: F22C12.28, F22C12_28(evalue: 2e-21, score=100) genbank/nr: Zinc(evalue: 9e-30, score=133)">
      <seq>agatgcaaatgaaatctgcagtaagagcatatagttcttctattaaaaaagaatttctttgtgatcaatccaaaagtaaaagttggaaatttatttgcaagcgtcatgagttatggtgtgattggatgattcggtttagagagatctcaagcgatatgtggaagacagaaaaaatgattgaaccgcatacttgtcttacagataattataaggaggatcatttcaatttgattgataacatgattgccacttcattaataccatatgttatgcaaaattcggacataaatattaagatgatccgtgaaattatcaaaggaaagcatcactatactcctagttatagaaaattacaaaaaggtcgaagaaaagcatttcgaatggtttatggtgattttgaaagttcatttaaagcattacctcgatacatggctgcactacaattattcaatccaggcactattattgagtgggagcatcattctacaacaatgcaagatgagcaaatttttaaatttctttttagggcttttaaacagagcattgatggtttcaaaagttgtaggctggtcatttctatcgacggcacacatctttatggtttgtataatatcaaattgttaattgcggttggaattgacgcggatggaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0116O16.1" temp_strand="+" temp_description="C06HBa0116O16.1  AC219211.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0116O16 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="72051" stop="73303"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72351" g_stop="73003" g_length="653"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="653" r_length="653" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0116O16.1" gen_strand="+" ref_id="SGN-U340496" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0116O16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U340496" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72351" e_stop="73003"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATGCAAATGAAATCTGCAGTAAGAGCATATAGTCTTGCTATTAAAAAAGAATTTCTTTGTGATCAATCCAAAAGTAAAAGTTGGAAAGTTATTTGCAAGCGTCATGAGTTAGGGTGTGATTGGATGATTAGGTTTAGAGAGATTTCAAGCGGTATGTGGAAGACAGGAAAAATGATTGAACCGCATACTTGTCTTACAGATAACTATAAGGAGGATCATTTCAATTTGAATGATAACATGATTGCCACTTCATTAATACCATATGTTATGCAAAATCCAGACATAAATATTAAGATGATCCGTGAAATTATCAAAGGAAAACATCACTATACTCCTAGTTACAGAAAAGCACAAAAAGATCGAAGAAAAGCATTTCGAATGGTTTATGGTGATTTTGAAAGTTCATTTAAGGCATTACCTCGATACATGGCTGCACTACAATTATTCAATCCAGGCACTATTATTGAGTGGGAGCATCATTCTACAACAATACAAGGTGAGCAAATTTTTAAATTTCTTTTTTGGGCTTTTAAACAGAGCATTGATGGTTTCAAAAGTTGTAGGCCGGTCATTTCTATCGACGGCACACATCTTTATGGTTTGTATGATATCAAATTGTTAATTGCGGTTGGAATTGATGCGAATGGAAAT</genome_strand>
        <mrna_strand>AGATGCAAATGAAATCTGCAGTAAGAGCATATAGTTCTTCTATTAAAAAAGAATTTCTTTGTGATCAATCCAAAAGTAAAAGTTGGAAATTTATTTGCAAGCGTCATGAGTTATGGTGTGATTGGATGATTCGGTTTAGAGAGATCTCAAGCGATATGTGGAAGACAGAAAAAATGATTGAACCGCATACTTGTCTTACAGATAATTATAAGGAGGATCATTTCAATTTGATTGATAACATGATTGCCACTTCATTAATACCATATGTTATGCAAAATTCGGACATAAATATTAAGATGATCCGTGAAATTATCAAAGGAAAGCATCACTATACTCCTAGTTATAGAAAATTACAAAAAGGTCGAAGAAAAGCATTTCGAATGGTTTATGGTGATTTTGAAAGTTCATTTAAAGCATTACCTCGATACATGGCTGCACTACAATTATTCAATCCAGGCACTATTATTGAGTGGGAGCATCATTCTACAACAATGCAAGATGAGCAAATTTTTAAATTTCTTTTTAGGGCTTTTAAACAGAGCATTGATGGTTTCAAAAGTTGTAGGCTGGTCATTTCTATCGACGGCACACATCTTTATGGTTTGTATAATATCAAATTGTTAATTGCGGTTGGAATTGACGCGGATGGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U319653" ref_strand="+" ref_description="SGN-U319653        Tomato 200607 #1 [3 ESTs aligned]">
      <seq>cagtatcgtcgagctcggatgattgaaaatgatgaaaatcaatctaatgaaatgagacaatatgcagcggaagtcgctcgtatttcaatggagtcaatgaatgcagcctttcaaggaacgcgattgagctttgatcatgattacaatcctcccactcaatacgatgaaccaccaccagtacaagtatctcgccgatcacgacaaacaacaccgagagagggtgctcgtcgaggtagaaggaccactagtgaaacagctgatttttctgcagggccctctaacactaatgtggcgactcccgagccttattatcccacatttgatttttctgtagggccctctaacactaatccaaatttttctagtcagcaaacagttggttttgtaactccgcaggttccaatatctgggtttgcacaatttagtggttctcaatatggttttcaacatggtatgcgtgaatttccgatacataattctccatttggtggaagattgaatttttcgaatgtaactgcgtttgatgattcaagatttaatgttggggcttcacaaaatttagttcttaatagacaaaatccacctcggagaacatctaggctacacaaatcaactagatgtggaacaggcagtcactatcaaaatgaggaagattttgaaaatgaagatgaaaatgaagatgagaatgaagatgtagaagattcggattcagaagaataattttttttatgcacctttattctaaaaggctaaagattcgaattttgaaatatgtaaattttgttgtttcgtgcaagtttgaacaaagtaatgagattatgttgaacaagttgaaaaaaaaaaaaaaaaaaagaaaaaaaaaaaaactcgaggggggcccggtccca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0116O16.1" temp_strand="-" temp_description="C06HBa0116O16.1  AC219211.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0116O16 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="75809" stop="70726"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75509" g_stop="74996" g_length="514"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="514" r_length="514" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74995" i_stop="74946" i_length="50">
            <donor d_prob="0.561" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.28"/>
          </gDNA_intron_boundary>
          <shorter_than_min_intron_len/>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74945" g_stop="74637" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="515" r_stop="829" r_length="315" r_score="0.887"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="837" polyA_stop="866"/>
      <MATCH_line gen_id="C06HBa0116O16.1" gen_strand="-" ref_id="SGN-U319653" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>823</cumulative_length_of_scored_exons>
        <coverage percentage="0.928" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0116O16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U319653" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75509" e_stop="74996"/>
          <exon e_start="74945" e_stop="74637"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTATCGTCGAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGAAATGAGACAATATGCAGCGGAAGTCGCTCGTATTTCAATGGAGTCAATGAATGCGGCCTTTCAGGGAACGCGATTGAGCTTTGATCATGATTACAATCCTCCCACTCAATACGATGAACCACCACCAGTACAAGTATCTCGCCGATCACGACAAACAACACCGAGAGAGGGTGCTCGTCGAGGTAGAAGGACCACTAGTGAAACAGCTGATTTTTCTGCAGGGCCCTCTAACACTAATGTGGCGACTCCCGAGCCTTATTATCCCACATTTGATTTTTCTGTAAGGGCCTCTAACACTAATCCGAATTTTTCTAGTCAGCAAACAGTTGATTTTGTAACTCCGCAGGTTCCAATATCTGGGTTTGCACAATTTAGTGGTTCTCAATATGGTTTTCAACATGGTATGCGTGAATTTCCGATACATAATTCTCCATTTGGTGGAAGATTGAATTTTTCGAATGTAAGTATAATTATTTTCATACAATTTTTTTAACTTTTTATAATTTTTTTTTATTTTTATTGCATG-TTTATTTGATTATATT-ATG-TT----ATATTTAGTTCTTAATAGACAAAATCCACCTCGGAGAACATCTAGGCTACACAAATCAACTAGATGTGGAACAGGCAGACACTATCAAAATGAGGAAGATTTTGAAAATGAAGATGAAAATGAAGATGAGAATGAAGATGTAGAAGATTCGGATTCAGAAGAATAATTTTTTTTATGAACCTTTATTCTAAAAGGCTGAAGATTCGAATTTTGAAATATGTAAATTTTGTTGTTTCGTGCAAGTTTGAACAAAGTAATGAGATTATGTTTGAACAA</genome_strand>
        <mrna_strand>CAGTATCGTCGAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGAAATGAGACAATATGCAGCGGAAGTCGCTCGTATTTCAATGGAGTCAATGAATGCAGCCTTTCAAGGAACGCGATTGAGCTTTGATCATGATTACAATCCTCCCACTCAATACGATGAACCACCACCAGTACAAGTATCTCGCCGATCACGACAAACAACACCGAGAGAGGGTGCTCGTCGAGGTAGAAGGACCACTAGTGAAACAGCTGATTTTTCTGCAGGGCCCTCTAACACTAATGTGGCGACTCCCGAGCCTTATTATCCCACATTTGATTTTTCTGTAGGGCCCTCTAACACTAATCCAAATTTTTCTAGTCAGCAAACAGTTGGTTTTGTAACTCCGCAGGTTCCAATATCTGGGTTTGCACAATTTAGTGGTTCTCAATATGGTTTTCAACATGGTATGCGTGAATTTCCGATACATAATTCTCCATTTGGTGGAAGATTGAATTTTTCGAATGTAA..................................................CTGCGTTTGATGATTCAAGATTTAATGTTGGGGCTTCACAAAATTTAGTTCTTAATAGACAAAATCCACCTCGGAGAACATCTAGGCTACACAAATCAACTAGATGTGGAACAGGCAGTCACTATCAAAATGAGGAAGATTTTGAAAATGAAGATGAAAATGAAGATGAGAATGAAGATGTAGAAGATTCGGATTCAGAAGAATAATTTTTTTTATGCACCTTTATTCTAAAAGGCTAAAGATTCGAATTTTGAAATATGTAAATTTTGTTGTTTCGTGCAAGTTTGAACAAAGTAATGAGATTATG-TTGAACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U319654" ref_strand="+" ref_description="SGN-U319654        Tomato 200607 #1 [9 ESTs aligned] arabidopsis/peptide: AT1G48120.1 | Symbol: None | calcineurin-like phosphoesterase family protein, contains Pfam profile: PF00149 calcineurin-like phosphoesterase | chr1:17777357-17783293 REVERSE | Aliases: F21D18.16, F21D18_16 (evalue: 1e-11, score=68.2) genbank/nr: gi|8778513|gb|AAF79521.1| F21D18.16 [Arabidopsis thaliana] (evalue: 3e-21, score=73.2)">
      <seq>ttggaagttattaacgataactcaactgagcatgaagttcaacaaagatttagattatatttattatggttatgtggtggatcaatatttccggataaatctaataataagattaatttggacattttgattgacatgagaaatttagatttaatgtcaactcaagcatggggatcggccgcattatcatatttgtataattgtttatgtcgtgcgtcaatgaaaaaatcaaatgaagtttgtggatttctctctttagtgtaggtatacatattttttgattaaatattttttatatactagtaatatgcacttttaaatttaagtgcattataagtaatggtgaatttatttattgtagatttgggcatgggaaagaattattcccctgcaaccattgccaaagcctctaagaaccaatcaatttgaggctttaactgcacttgcacgtaaatggacgcgacgtagaaatcatcaaaatgaggcacgaactgtaatcggtgtgattagggatgtacttgataatctaactgatgaacaagtatttgatattattagtatcttatacttttcatattttattttattttaaataagaatatatttttttctgccaatgttgtttttataattatcttacttaattatttttttatagtttattcggcagccttattcggaagatgttattaatggattgcctgagtggtgtcggtcaggacaacgtgtctggatggcacaggtgccactgatttatggaatttatcgtgagtggcacatggttgatcgtgttgtgagacagttcgattatttacaacatattcctggaccgtgtacccaattttccgaatatcattttaagcgtaataaacgatcaaaaataaaacaagaagatatagatgcatttaactatacacaatatttatgggaacaacgtcaaaatcgtatatttcgacctccatttgtaagtgatcaaacagattacttccgttggtacatgaggcatacccgcatggtcattggaaatccacaacatgttgtacaaaaagggtatcaacacatggcaggaagacatgaggcattagctaggggtcatgaaatgcagtatcgtcgagctcggatgattgaaaatgatgaaaatcaatctaatggaatgagacaatatgcagcggaagtcgctcgtatttcaatggagggaatgaaggcaggctcttaaggaacgcgattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0116O16.1" temp_strand="-" temp_description="C06HBa0116O16.1  AC219211.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0116O16 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="76990" stop="75100"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76690" g_stop="75609" g_length="1082"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1084" r_length="1084" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75608" i_stop="75528" i_length="81">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75527" g_stop="75384" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1085" r_stop="1228" r_length="144" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0116O16.1" gen_strand="-" ref_id="SGN-U319654" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>1226</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0116O16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U319654" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76690" e_stop="75609"/>
          <exon e_start="75527" e_stop="75384"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGAAGTTATTAACGATAACTCAACTGAGCATGAAGTTCAACAAAGATTTAGATTATATTTATTATGGTTATGTGGTGGATCAATATTTCCGGATAAATCTAATAATAAGATTAATTTGGACATTTTGATTGACATGAGAAATTTAGATTTAATGTCAACTCAAGCATGGGGATCGGCCGCATTATCATATTTGTATAATTGTTTATGCCGTGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGCAGGTATACATATTTTTTGATTAAATATTTTTTATATACTAGTAATATGCACTTTTAAATTTAAGTGCATTATAAGTAATGGTGAATTTATTTATTGTAGATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCATTGCCAAAGCCTCTAAGAACCAATCAATTTGAGGCTTTAACTGCACTTGCACATAAATGGACGCGACGTAGAAATCATCAAAATGAGGCACGAACTGTAATCGGTGTGATTAGGGATGTACTTGATAATCTAACTGATGAACAGGTATTTAATATTATTAGTATCTTATACTTTTCATATTTTATTTTATTTTAAATAAGAATATATTTTTTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTA-TTTTTTATAGTTTATTTGGCAGCCTTATTCGGAAGATGTTATTAATGGATTGCCTGAGTGGTGTCGGTCAGGACAACGTGTCTGGATGGCACAGGTGCCACTGATTTATGGAATTTATCGTGAGTGGCACATGGTTGATCATGTTGTGAGACAGTTCGGTTATTTACAACATATTACTGGACCGTGTACCCAATTTTTCGAATATCATTTTAAGCGTGATAAACGATCAAAAATAAAACAAGAAGATATAGATGCATTTAACTA-ACACAATATTTATGGGAACAACGTCAAAATCGTATATTTCGACCTCCATTTGTAAGTGGTCAAACAGATTACTTCCGTTGGTACATGAGGCATACCCGCATGGTCATTGGAAATCCACAACATGTTGTACAAAAAGGGTATCAACACATGGCAGGAAGACATGAGGCATTAGTATGTATATTACATAAATTTCAAATTATTATGTCAATCTTTAATAAATTTTTTTTATTAATATTTGTTTATTCATTATAGGCTAGGGGTCATGAAATGCAGTATCGTCGAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGAAATGAGACAATATGCAGCGGAAGTCGCTCGTATTTCAATGGAGTCAATGAATGCGGCCTTTCAGGGAACGCGATTG</genome_strand>
        <mrna_strand>TTGGAAGTTATTAACGATAACTCAACTGAGCATGAAGTTCAACAAAGATTTAGATTATATTTATTATGGTTATGTGGTGGATCAATATTTCCGGATAAATCTAATAATAAGATTAATTTGGACATTTTGATTGACATGAGAAATTTAGATTTAATGTCAACTCAAGCATGGGGATCGGCCGCATTATCATATTTGTATAATTGTTTATGTCGTGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGTAGGTATACATATTTTTTGATTAAATATTTTTTATATACTAGTAATATGCACTTTTAAATTTAAGTGCATTATAAGTAATGGTGAATTTATTTATTGTAGATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCATTGCCAAAGCCTCTAAGAACCAATCAATTTGAGGCTTTAACTGCACTTGCACGTAAATGGACGCGACGTAGAAATCATCAAAATGAGGCACGAACTGTAATCGGTGTGATTAGGGATGTACTTGATAATCTAACTGATGAACAAGTATTTGATATTATTAGTATCTTATACTTTTCATATTTTATTTTATTTTAAATAAGAATATATTTTTTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTTATAGTTTATTCGGCAGCCTTATTCGGAAGATGTTATTAATGGATTGCCTGAGTGGTGTCGGTCAGGACAACGTGTCTGGATGGCACAGGTGCCACTGATTTATGGAATTTATCGTGAGTGGCACATGGTTGATCGTGTTGTGAGACAGTTCGATTATTTACAACATATTCCTGGACCGTGTACCCAATTTTCCGAATATCATTTTAAGCGTAATAAACGATCAAAAATAAAACAAGAAGATATAGATGCATTTAACTATACACAATATTTATGGGAACAACGTCAAAATCGTATATTTCGACCTCCATTTGTAAGTGATCAAACAGATTACTTCCGTTGGTACATGAGGCATACCCGCATGGTCATTGGAAATCCACAACATGTTGTACAAAAAGGGTATCAACACATGGCAGGAAGACATGAGGCATTA.................................................................................GCTAGGGGTCATGAAATGCAGTATCGTCGAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGGAATGAGACAATATGCAGCGGAAGTCGCTCGTATTTCAATGGAGGGAATGAAGGCAGGCTCTTAAGGAACGCGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U327844" ref_strand="+" ref_description="SGN-U327844        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: AT1G48120.1 | Symbol: None | calcineurin-like phosphoesterase family protein, contains Pfam profile: PF00149 calcineurin-like phosphoesterase | chr1:17777357-17783293 REVERSE | Aliases: F21D18.16, F21D18_16 (evalue: 2e-17, score=86.3) genbank/nr: mutator(evalue: 3e-22, score=108)">
      <seq>gtagtttttcaattttccaatattcttgaaaacccttctatttttctaattttttaaagtttttaaaagtcttttttttataaggcgggtatgaatttatttttaatttatttaattaattttatacttttatatgatattttggatatattcaatcttttgatacttatattaatgttaatattttttttattttttgtgtatagatatgcattcctcaaatgtatacgtacatcctggtccagtagagcatgatgtattaaaaattcaagttcatcatcgttccgaaggaatttggaatggtagtataaaagaagagaaatgttgcttatatacgcgtcgtggtgatatttaactttggcaacatttaaaatatcatccattacattctcgcatcgttcaatattttgaaaattgtagatttaaaggaattcttgatgttggatgtgtgccgtatgactccggatttatttctgctttaattgaaaggtggcgtccggaaactcatacttttcacatgcgaactgacgaggctaccataactttacaagatattgaaattttattcggaatggtagtagatggtagtcctataattttaaatggagctgattctttaaggattataggtagacaagaaatgatttttcaattaacaggatggttacccgatactagttgtttttctggtgttagtagattgtcaacatataaattgattgagtatatcgaaggtttggaagttattaacgataactcaactgagcatgaagttcaacaaagatttagattatatttattat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0116O16.1" temp_strand="-" temp_description="C06HBa0116O16.1  AC219211.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0116O16 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="77637" stop="76324"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77432" g_stop="76624" g_length="809"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="803" r_length="803" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0116O16.1" gen_strand="-" ref_id="SGN-U327844" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>809</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0116O16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U327844" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77432" e_stop="76624"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTACTTTCAATCTTCCACAAT-CTTAAAATTCTTGTTATTCTTCAAATTTTCTAAAGTTTTTAAAAGCATTTTCTTTATAAGGTGAGTTTAAATTTATTTTATTTTTAATTTATTTTAATTAATTTTATACTTTTATATGATATTGTTGATATATTCAATCGTTTGATACTTATATTAATGTTAATTTTTATTTTTATTTTTTGTGTATAGATATGGATCCATCAAATTTATACGTACATCCTGGTCCAGTAGAGCATGATGTATTAAAAATTCAAGTTCATCATCGTTCCGAAGGAATTTGGAATGGTAGCATAAAAGAAGAGAGATGTTGCTTATATACGCGTCGTGGTGATATTGAATTTTGGCAACATTTAAAATATCATCCATTACATTCTCGCATCCTTCAATATTTTGAAAATTGTAGATTTAAAGGAATTCTTGATGTTGGATGTGTGCCGTATGACTCCGGATTAATTTCTGCTTTAATTGAAAGGTGGCGTCCGGAAACTCATACTTTTCACATGCGAACTGGCGAGGCTACCATAACTTTACAAGATATTGAAATTTTATTCGGAATGGTAGTAGATGGTAGTCCTATAATTTTAAATGGAGCTGATTCTTTAGGGATTATAGGTAGACAAGAAATGATTTTTCAATTAACAGGATGGTTACCCGATACTAGTTGTTTTTCTGGTGTTAGTAGATTGTCAACATATAAATTGATTGAGTATATCGAAGGTTTGGAAGTTATTAACGATAACTCAACTGAGCATGAAGTTCAACAAAGATTTAGATTATATTTATTAT</genome_strand>
        <mrna_strand>GTAGTTTTTCAATTTTCCAATATTCTTGAAAACCCTTCTATTTTTCTAATTTTTTAAAGTTTTTAAAAGTCTTTTTTTTATAAGGCG-G-GT--A-TGAATTTATTTTTAATTTAT-TTAATTAATTTTATACTTTTATATGATATTTTGGATATATTCAATCTTTTGATACTTATATTAATGTTAATATTT-TTTTTATTTTTTGTGTATAGATATGCATTCCTCAAATGTATACGTACATCCTGGTCCAGTAGAGCATGATGTATTAAAAATTCAAGTTCATCATCGTTCCGAAGGAATTTGGAATGGTAGTATAAAAGAAGAGAAATGTTGCTTATATACGCGTCGTGGTGATATTTAACTTTGGCAACATTTAAAATATCATCCATTACATTCTCGCATCGTTCAATATTTTGAAAATTGTAGATTTAAAGGAATTCTTGATGTTGGATGTGTGCCGTATGACTCCGGATTTATTTCTGCTTTAATTGAAAGGTGGCGTCCGGAAACTCATACTTTTCACATGCGAACTGACGAGGCTACCATAACTTTACAAGATATTGAAATTTTATTCGGAATGGTAGTAGATGGTAGTCCTATAATTTTAAATGGAGCTGATTCTTTAAGGATTATAGGTAGACAAGAAATGATTTTTCAATTAACAGGATGGTTACCCGATACTAGTTGTTTTTCTGGTGTTAGTAGATTGTCAACATATAAATTGATTGAGTATATCGAAGGTTTGGAAGTTATTAACGATAACTCAACTGAGCATGAAGTTCAACAAAGATTTAGATTATATTTATTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U334399" ref_strand="+" ref_description="SGN-U334399        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT5G07070.1 | Symbol: None | CBL-interacting protein kinase 2 (CIPK2), identical to CBL-interacting protein kinase 2 (Arabidopsis thaliana) gi:9280636:gb:AAF86506 | chr5:2196435-2198115 REVERSE | Aliases: T28J14.10, T28J14_10 (evalue: 1e-67, score=252) genbank/nr: gi|50939993|ref|XP_479524.1| putative Serine/threonine Kinase [Oryza sativa (japonica cultivar-group)] >gi|33146431|dbj|BAC79539.1| putative Serine/threonine Kinase [Oryza sativa (japonica cultivar-group)] (evalue: 4e-67, score=257)">
      <seq>gctatacgaggtcatggcaaccaagagtaagatttactttgtgatcgaacatgccaaaggtggcgagcttttcaacaaactgacaaaggggaggctcacagaagatgttgctagaaagttgtttcagcaactgatcaatgcagttgaattttgccacagccgaggtgtttatcaccgtgatctcaaaccggaaaatctcctactggatgagaatggaaacctaaaggtctcagactttggtttgagtgcattagcagagtctaagcgacaagatgggttactccacacaacctgtggtacaccagcatatgttgctcccgaggtgattggtagaaaaggatatgagggtgctaaagctgacatctggtcttgtggggtgattttatttgtcttgttggctggttatcttccattctatgacttagggtcggaggaatctgtataggaagatatgcagggcatagtacaaatgcccttaattggttccctctagaagtgcgtaaaactttctctctaagatcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C06HBa0116O16-Vqumd/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C06HBa0116O16.1" temp_strand="+" temp_description="C06HBa0116O16.1  AC219211.1 htgs_phase:1 submitted_to_sgn_as:C06HBa0116O16 sequenced_by:cbsg upload_account_name:netherlands [organism=Solanum lycopersicum]">
        <position start="100509" stop="101627"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100809" g_stop="101328" g_length="520"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="524" r_length="524" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C06HBa0116O16.1" gen_strand="+" ref_id="SGN-U334399" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>520</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C06HBa0116O16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U334399" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100809" e_stop="101328"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTATACGAGGTCATGGCAACTAAGAGTAAGATTTACTTTGTGATCGAACAGGCCAAAGGTGGCGAGCTTTTCAACAAACTGACAAAGGGCAGACTCAAGGAAGACGCTGCTAGAAAGTTGTTTCAGCAACTGATCAATGCAGTTGAATTTTGCCACAGCCGAGGTGTTTATCACCGTGATCTCAAACCAGAAAATCTCCTACTGGATGAGAATGGAAACCTAAAGGTCTCAGACTTTGGTTTGAGTGCATTAGCTGAGTCTAAGCGACAAGACGGGTTACTTTACACAACCTGTGGTACACCAGCATATGTTGCTCCTGAGGTGATCGGTAGAAAAGGATATGAGGGTGCCAAAGCTGACATCTGGTCTTGTGGAGTGATTTTATTTGTCTTGTTGGCTGGTTATCTTCCATTCTATGACTCA-AATCTTATTTATCTGTATAGGAAGATATGCAAGGCGGAGTACAAATGTCC-TAATTGGTTCCCTCTAGAAGTGCGT-AAAC-TTCTCTCTAGGATCTTC</genome_strand>
        <mrna_strand>GCTATACGAGGTCATGGCAACCAAGAGTAAGATTTACTTTGTGATCGAACATGCCAAAGGTGGCGAGCTTTTCAACAAACTGACAAAGGGGAGGCTCACAGAAGATGTTGCTAGAAAGTTGTTTCAGCAACTGATCAATGCAGTTGAATTTTGCCACAGCCGAGGTGTTTATCACCGTGATCTCAAACCGGAAAATCTCCTACTGGATGAGAATGGAAACCTAAAGGTCTCAGACTTTGGTTTGAGTGCATTAGCAGAGTCTAAGCGACAAGATGGGTTACTCCACACAACCTGTGGTACACCAGCATATGTTGCTCCCGAGGTGATTGGTAGAAAAGGATATGAGGGTGCTAAAGCTGACATCTGGTCTTGTGGGGTGATTTTATTTGTCTTGTTGGCTGGTTATCTTCCATTCTATGACTTAGGGTCGGAGGAATCTGTATAGGAAGATATGCAGGGCATAGTACAAATGCCCTTAATTGGTTCCCTCTAGAAGTGCGTAAAACTTTCTCTCTAAGATCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>19</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="8561" PGL_stop="8846"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8561" e_stop="8846"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.958"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.958">
            <gDNA_exon_boundary e_start="8561" e_stop="8846" e_length="286"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8561" stop="8846"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335073" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTGAGGAACAGTAGGGGGACGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAATTTCAATCTTTCATTCTTTCTTTCATGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACGAATTGGTATCTGACCATCTTCACTCTATTTCGCAGATGGTTAGAACTAGAGCAACGACTACGCCAACACCAACACCGGCCAGACAAGAAACAACTGAGTCAGCCACTGGGGCTGTGG</gDNA_template>
            <first_frame> L  G  S  L  V  S  S  H  K  N  R  S  S  R  V  L  R  N  S  R  G  T  P  L  L  F  L  E  R  L  *  D  F  R  K  I  S  I  F  H  S  F  F  H  A  T  T  *  V  Q  L  V  S  R  R  Y  E  L  V  S  D  H  L  H  S  I  S  Q  M  V  R  T  R  A  T  T  T  P  T  P  T  P  A  R  Q  E  T  T  E  S  A  T  G  A  V  </first_frame>
            <second_frame>  *  V  R  W  S  H  H  T  R  T  G  L  V  E  S  *  G  T  V  G  G  R  L  Y  F  S  L  R  G  Y  K  T  L  G  K  F  Q  S  F  I  L  S  F  M  L  L  L  E  S  N  W  Y  L  G  D  T  N  W  Y  L  T  I  F  T  L  F  R  R  W  L  E  L  E  Q  R  L  R  Q  H  Q  H  R  P  D  K  K  Q  L  S  Q  P  L  G  L  W </second_frame>
            <third_frame>   R  F  V  G  L  I  T  Q  E  Q  V  *  *  S  L  E  E  Q  *  G  D  A  F  T  F  P  *  E  A  I  R  L  *  E  N  F  N  L  S  F  F  L  S  C  Y  Y  L  S  P  I  G  I  *  A  I  R  I  G  I  *  P  S  S  L  Y  F  A  D  G  *  N  *  S  N  D  Y  A  N  T  N  T  G  Q  T  R  N  N  *  V  S  H  W  G  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0116O16.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8610" stop="8846"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GTVGGRLYFSLRGYKTLGKFQSFILSFMLLLESNWYLGDTNWYLTIFTLFRRWLELEQRLRQHQHRPDKKQLSQPLGLW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="11563" PGL_stop="8853"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="11563" e_stop="8853"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.953"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.953">
            <gDNA_exon_boundary e_start="11563" e_stop="8853" e_length="2711"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11563" stop="10851"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326740" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11043" stop="10385"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10974" stop="10217"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317065" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10571" stop="10241"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335937" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10360" stop="8924"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9285" stop="8853"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335932" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAATCCCTTGACAAATCGACGGTAGTAGCTAGCTAACCCTACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTCACCCAATTCTTCACTGTCTCAACCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGTCCCAAGAATGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTGAAATGCACTTCATGTTCCTTCTTGCTCTTTGAGTATACTAATATATCATCAATAAACACGATCACGAAGAGGTCCAAATATGGTTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTTAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCGCAAATCAATCTTAGAGAAGACACAAACACCTTGTAACTGATCGAACAAGTCATCAATGCGGGGAAGAGGGTACTTGTTCTTAATAGTTACTTTATTCAGTTGTCTGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAATAACTCTTGAAGTTGTGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCGGGTTCAAGATCAATATAGAAGTCAATATCCCTATCCGGTGGCATACCAGGAAGATCCGCAGGGAACACATCCAGAAACTCACGAACTACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAATCATTTTCTTAGCACGAAGAAAGGAGACGATGCGGACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGGTCTGTCCCAGGCTTGGCTAACATCACCGTTTTAGCATTACAATCCAAGATTGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATCACATCAAAATCGTCCATTTCTAAGATAACCAAATCTACATAGGTGTTGCTCCCCACAAAGTTCACCAGACAAGACCTATACACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGAAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACGGAAGCCATGCAATCACAAACAAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCATTTGTCTGTCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTGCCTCGACCACCACGTCCTCCAGAATAACGACCTCTACCATGACCACCCCTACCTCTAGCTATTGGAGGTTTATAACTTGGTCCGGGACAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCACTCATAGGCCCCTCGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAGCCGAGTAACCTCCGGAACCTTGTCCTCTAGAGTAAGAACCCTTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGTCGTGGTGAAGTTGTCTGGCTTCACTCCTTCCATTTCTATCACAAAGTCTACCACTTCTTGGAAGGATGTTGCCGTTGCCGCTACCTGTAAGGCCGAAATCCACAATTCTGACCTCAACCCCTTCACAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGGAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGCTCAGGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGTATATACTTCTCCATAAACAAACTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCATATTTTGGCGTTTCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCATGACAGTCAACCAGAAAATCGTAAGCATCCTCAGATTCCGCACCTTTGAAGACTGGAGGTTTCAATTTCAATAACTTACTGAAAAAATCATGCTGATCACTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAATGTGCCTATTTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAGAAAACTGGGGGTGTCTGGCCCTGATCAGATAATCCACTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCATTCACCCCATCCTCCCCCTCTCTTATCACTTCCTCAGTCGGTGGAGGAGTCACTGCCCTAGTATCAGATGGGCTAGGTGCTCGTCCTCTTCCTCTAGAGGACGTCCTCCCACGACCTCTACCACGGCCTCTTGCCGTTGTTCTTC</gDNA_template>
            <first_frame> E  S  L  D  K  S  T  V  V  A  S  *  P  Y  K  A  P  Y  F  *  H  I  S  R  S  H  P  I  L  H  C  L  N  L  R  R  I  H  H  H  S  I  L  R  N  H  V  S  Q  E  *  H  C  I  *  P  K  L  T  L  R  E  L  G  I  K  L  F  L  P  Q  H  F  Q  Y  H  S  E  M  H  F  M  F  L  L  A  L  *  V  Y  *  Y  I  I  N  K  H  D  H  E  E  V  Q  I  W  F  K  N  P  V  H  Q  A  H  E  R  S  R  G  I  R  *  T  K  R  H  H  Y  K  F  V  M  P  I  P  R  S  K  S  S  L  W  H  I  R  C  P  Y  F  Q  L  M  I  T  G  S  Q  I  N  L  R  E  D  T  N  T  L  *  L  I  E  Q  V  I  N  A  G  K  R  V  L  V  L  N  S  Y  F  I  Q  L  S  V  V  Y  A  H  P  K  T  P  I  L  L  L  Y  K  Q  N  R  S  T  P  R  R  C  T  W  S  N  E  A  F  V  Q  *  L  L  K  L  C  F  *  L  S  *  L  R  G  S  H  S  I  R  G  Y  R  N  G  A  S  T  G  F  K  I  N  I  E  V  N  I  P  I  R  W  H  T  R  K  I  R  R  E  H  I  Q  K  L  T  N  Y  R  N  R  L  N  R  R  Y  L  G  S  V  I  L  E  M  C  Q  E  S  *  T  P  F  T  N  H  F  L  S  T  K  K  G  D  D  A  D  R  I  G  S  V  V  T  L  P  H  *  R  V  C  P  R  L  G  *  H  H  R  F  S  I  T  I  Q  D  C  K  L  R  R  K  P  S  H  T  Q  N  H  I  K  I  V  H  F  *  D  N  Q  I  Y  I  G  V  A  P  H  K  V  H  Q  T  R  P  I  H  L  F  N  Y  H  R  L  T  H  R  S  R  N  T  N  R  H  I  K  K  F  T  M  *  I  *  T  I  S  K  *  G  R  Y  I  R  K  R  G  S  R  I  K  Q  Y  G  S  H  A  I  T  N  K  K  I  T  C  D  D  S  I  R  C  L  R  F  R  P  P  R  E  S  V  T  M  G  P  I  I  C  L  S  I  A  P  T  M  L  *  C  S  G  P  S  L  P  I  T  S  A  V  L  V  T  T  I  A  S  T  T  T  S  S  R  I  T  T  S  T  M  T  T  P  T  S  S  Y  W  R  F  I  T  W  S  G  T  I  S  P  N  M  S  N  L  P  T  S  I  T  F  S  G  V  T  H  R  P  L  G  E  V  L  T  G  L  R  W  T  P  N  Y  S  L  *  *  R  L  N  G  S  S  R  V  T  S  G  T  L  S  S  R  V  R  T  L  K  L  T  S  L  S  K  P  L  *  C  R  C  R  G  E  V  V  W  L  H  S  F  H  F  Y  H  K  V  Y  H  F  L  E  G  C  C  R  C  R  Y  L  *  G  R  N  P  Q  F  *  P  Q  P  L  H  K  P  A  N  P  L  L  R  T  E  T  E  L  S  G  I  S  G  *  C  T  E  L  S  L  I  S  I  N  R  H  P  T  L  L  *  A  Q  E  L  I  P  F  P  I  P  Q  S  P  G  Y  I  L  L  H  K  Q  T  R  E  *  G  P  S  H  R  W  C  L  Y  W  L  T  L  D  M  *  P  P  P  Y  F  G  V  S  L  K  L  I  S  H  K  L  H  T  K  P  F  Y  Y  T  H  L  V  *  *  L  M  T  V  N  Q  K  I  V  S  I  L  R  F  R  T  F  E  D  W  R  F  Q  F  Q  *  L  T  E  K  I  M  L  I  T  C  H  Y  R  P  S  S  Q  T  W  K  C  A  Y  F  Q  W  N  I  H  A  G  S  H  S  S  R  M  L  Y  L  R  S  L  R  C  W  C  R  E  N  W  G  C  L  A  L  I  R  *  S  T  K  I  S  Q  N  L  I  D  H  L  W  G  R  L  G  W  H  F  L  I  L  H  L  F  I  H  P  I  L  P  L  S  Y  H  F  L  S  R  W  R  S  H  C  P  S  I  R  W  A  R  C  S  S  S  S  S  R  G  R  P  P  T  T  S  T  T  A  S  C  R  C  S   </first_frame>
            <second_frame>  N  P  L  T  N  R  R  *  *  L  A  N  P  T  K  L  L  I  S  D  T  L  V  G  L  T  Q  F  F  T  V  S  T  L  E  G  S  T  I  T  P  S  L  E  T  T  C  P  K  N  D  T  A  S  S  Q  N  S  H  L  E  N  L  A  *  S  F  F  S  L  N  I  S  N  T  I  L  K  C  T  S  C  S  F  L  L  F  E  Y  T  N  I  S  S  I  N  T  I  T  K  R  S  K  Y  G  L  K  I  P  F  I  K  L  M  N  A  A  G  A  F  V  R  P  K  D  I  T  T  N  S  *  C  P  Y  L  V  R  K  A  V  F  G  T  S  V  A  R  I  F  N  *  *  *  P  D  R  K  S  I  L  E  K  T  Q  T  P  C  N  *  S  N  K  S  S  M  R  G  R  G  Y  L  F  L  I  V  T  L  F  S  C  L  *  S  M  H  I  R  K  L  P  S  F  F  F  T  N  K  T  G  A  P  Q  G  D  A  L  G  L  M  K  P  L  F  N  N  S  *  S  C  A  F  N  S  L  N  S  A  G  A  I  L  *  G  G  I  E  M  G  R  V  P  G  S  R  S  I  *  K  S  I  S  L  S  G  G  I  P  G  R  S  A  G  N  T  S  R  N  S  R  T  T  E  T  D  S  I  E  G  T  W  V  V  S  S  L  R  C  A  K  K  A  K  H  P  L  L  I  I  F  L  A  R  R  K  E  T  M  R  T  G  L  E  V  *  S  P  S  H  T  N  G  S  V  P  G  L  A  N  I  T  V  L  A  L  Q  S  K  I  A  N  C  G  E  S  Q  V  I  P  R  I  T  S  K  S  S  I  S  K  I  T  K  S  T  *  V  L  L  P  T  K  F  T  R  Q  D  L  Y  T  F  S  T  T  T  D  S  P  T  G  V  E  T  R  I  G  I  S  R  N  S  Q  C  K  F  R  P  L  A  N  E  E  D  T  *  E  N  V  D  P  G  S  N  N  T  E  A  M  Q  S  Q  T  R  R  L  P  V  M  T  A  S  D  A  S  A  S  D  R  P  G  K  A  *  Q  W  A  L  S  F  V  C  P  L  P  L  P  C  C  D  V  V  A  P  V  C  P  L  P  L  P  F  W  *  P  P  L  P  R  P  P  R  P  P  E  *  R  P  L  P  *  P  P  L  P  L  A  I  G  G  L  *  L  G  P  G  Q  F  L  L  I  C  P  I  S  P  H  P  *  H  S  L  E  S  L  I  G  P  S  E  K  C  *  P  V  *  G  G  P  P  T  T  V  C  S  E  D  *  M  G  R  A  E  *  P  P  E  P  C  P  L  E  *  E  P  L  N  S  P  P  F  R  N  L  F  D  V  D  V  V  V  K  L  S  G  F  T  P  S  I  S  I  T  K  S  T  T  S  W  K  D  V  A  V  A  A  T  C  K  A  E  I  H  N  S  D  L  N  P  F  T  N  R  R  I  R  S  *  G  L  K  Q  S  *  V  A  Y  L  D  S  A  R  N  L  A  S  *  A  L  T  D  I  L  P  C  S  R  L  R  N  S  S  L  F  L  S  L  K  V  R  G  I  Y  F  S  I  N  K  L  E  N  E  A  Q  V  I  G  G  A  S  I  G  *  H  S  I  C  D  R  H  H  I  L  A  F  P  *  N  *  *  V  T  N  S  T  P  N  R  S  T  I  P  I  L  C  S  S  S  *  Q  S  T  R  K  S  *  A  S  S  D  S  A  P  L  K  T  G  G  F  N  F  N  N  L  L  K  K  S  C  *  S  L  V  I  I  G  P  V  V  R  R  G  N  V  P  I  S  N  G  T  S  M  R  G  A  I  V  A  A  C  C  T  S  G  A  *  G  A  G  A  E  K  T  G  G  V  W  P  *  S  D  N  P  L  R  *  A  R  T  *  L  I  I  S  G  V  G  W  G  G  I  S  S  F  C  T  C  S  F  T  P  S  S  P  S  L  I  T  S  S  V  G  G  G  V  T  A  L  V  S  D  G  L  G  A  R  P  L  P  L  E  D  V  L  P  R  P  L  P  R  P  L  A  V  V  L  </second_frame>
            <third_frame>   I  P  *  Q  I  D  G  S  S  *  L  T  L  Q  S  S  L  F  L  T  H  *  *  V  S  P  N  S  S  L  S  Q  P  *  K  D  P  P  S  L  H  P  *  K  P  R  V  P  R  M  T  L  H  L  A  K  T  H  T  *  R  T  W  H  K  A  F  S  P  S  T  F  P  I  P  F  *  N  A  L  H  V  P  S  C  S  L  S  I  L  I  Y  H  Q  *  T  R  S  R  R  G  P  N  M  V  *  K  S  R  S  S  S  S  *  T  Q  Q  G  H  S  L  D  Q  K  T  S  L  Q  I  R  N  A  H  T  S  F  E  K  Q  S  L  A  H  P  L  P  V  F  S  I  D  D  N  R  I  A  N  Q  S  *  R  R  H  K  H  L  V  T  D  R  T  S  H  Q  C  G  E  E  G  T  C  S  *  *  L  L  Y  S  V  V  C  S  L  C  T  S  E  N  S  H  P  S  S  L  Q  T  K  P  E  H  P  K  E  M  H  L  V  *  *  S  L  C  S  I  T  L  E  V  V  L  L  T  L  L  T  P  R  E  P  F  Y  K  G  V  *  K  W  G  E  Y  R  V  Q  D  Q  Y  R  S  Q  Y  P  Y  P  V  A  Y  Q  E  D  P  Q  G  T  H  P  E  T  H  E  L  P  K  P  T  Q  S  K  V  L  G  *  C  H  P  *  D  V  P  R  K  L  N  T  L  Y  *  S  F  S  *  H  E  E  R  R  R  C  G  P  D  W  K  C  S  H  P  P  T  L  T  G  L  S  Q  A  W  L  T  S  P  F  *  H  Y  N  P  R  L  Q  I  A  E  K  A  K  S  Y  P  E  S  H  Q  N  R  P  F  L  R  *  P  N  L  H  R  C  C  S  P  Q  S  S  P  D  K  T  Y  T  P  F  Q  L  P  Q  T  H  P  P  E  *  K  H  E  *  A  Y  Q  E  I  H  N  V  N  L  D  H  *  Q  M  R  K  I  H  K  K  T  W  I  Q  D  Q  T  I  R  K  P  C  N  H  K  Q  E  D  Y  L  *  *  Q  H  Q  M  P  P  L  Q  T  A  Q  G  K  R  N  N  G  P  Y  H  L  S  V  H  C  P  Y  H  V  V  M  *  W  P  Q  F  A  H  Y  L  C  R  F  G  D  H  H  C  L  D  H  H  V  L  Q  N  N  D  L  Y  H  D  H  P  Y  L  *  L  L  E  V  Y  N  L  V  R  D  N  F  S  *  Y  V  Q  S  P  H  I  H  N  I  L  W  S  H  S  *  A  P  R  R  S  V  D  R  S  E  V  D  P  Q  L  Q  S  V  V  K  T  E  W  V  E  P  S  N  L  R  N  L  V  L  *  S  K  N  P  *  T  H  L  P  F  E  T  S  L  M  S  M  S  W  *  S  C  L  A  S  L  L  P  F  L  S  Q  S  L  P  L  L  G  R  M  L  P  L  P  L  P  V  R  P  K  S  T  I  L  T  S  T  P  S  Q  T  G  E  S  A  L  E  D  *  N  R  V  E  W  H  I  W  I  V  H  G  T  *  P  H  K  H  *  P  T  S  Y  L  A  L  G  S  G  T  H  P  F  S  Y  P  S  K  S  G  V  Y  T  S  P  *  T  N  *  R  M  R  P  K  S  *  V  V  P  L  L  V  D  T  R  Y  V  T  A  T  I  F  W  R  F  L  E  T  D  K  S  Q  T  P  H  Q  T  V  L  L  Y  P  S  C  V  V  A  H  D  S  Q  P  E  N  R  K  H  P  Q  I  P  H  L  *  R  L  E  V  S  I  S  I  T  Y  *  K  N  H  A  D  H  L  S  L  *  A  Q  *  S  D  V  E  M  C  L  F  P  M  E  H  P  C  G  E  P  *  *  P  H  V  V  P  P  E  P  E  V  L  V  Q  R  K  L  G  V  S  G  P  D  Q  I  I  H  *  D  K  P  E  P  D  *  S  S  L  G  *  V  G  V  A  F  P  H  F  A  L  V  H  S  P  H  P  P  P  L  L  S  L  P  Q  S  V  E  E  S  L  P  *  Y  Q  M  G  *  V  L  V  L  F  L  *  R  T  S  S  H  D  L  Y  H  G  L  L  P  L  F  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0116O16.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10132" stop="9878"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CSGPSLPITSAVLVTTIASTTTSSRITTSTMTTPTSSYWRFITWSGTISPNMSNLPTSITFSGVTHRPLGEVLTGLRWTPNYSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0116O16.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9076" stop="8855"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>STKISQNLIDHLWGRLGWHFLILHLFIHPILPLSYHFLSRWRSHCPSIRWARCSSSSSRGRPPTTSTTASCRCS</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0116O16.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10858" stop="10658"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LRGSHSIRGYRNGASTGFKINIEVNIPIRWHTRKIRREHIQKLTNYRNRLNRRYLGSVILEMCQES*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0116O16.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10791" stop="10591"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSISLSGGIPGRSAGNTSRNSRTTETDSIEGTWVVSSLRCAKKAKHPLLIIFLARRKETMRTGLEV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0116O16.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="5"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9051" stop="8854"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LIISGVGWGGISSFCTCSFTPSSPSLITSSVGGGVTALVSDGLGARPLPLEDVLPRPLPRPLAVVL</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0116O16.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="6"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11367" stop="11170"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFFSLNISNTILKCTSCSFLLFEYTNISSINTITKRSKYGLKIPFIKLMNAAGAFVRPKDITTNS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0116O16.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="7"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9822" stop="9628"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EPLNSPPFRNLFDVDVVVKLSGFTPSISITKSTTSWKDVAVAATCKAEIHNSDLNPFTNRRIRS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="8920" PGL_stop="9473"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8920" e_stop="9473"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.904"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.904">
            <gDNA_exon_boundary e_start="8920" e_stop="9473" e_length="554"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8920" stop="9473"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335931" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCTAGCCCATCTGATACTAGGGCAGTGACTCCTCCACCGACTGAGGAAGTGATAAGAGAGGGGGAGGATGGGGTGAATGAACAAGTGCAAAATGAGGAAATGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTGGCTTATCTTAGTGGATTATCTGATCAGGGCCAGACACCCCCAGTTTTCTCTGCACCAGCACCTCAGGCTCCGGAGGTACAACATGCGGCTACTATGGCTCCCCGCATGGATGTTCCATTGGAAATAGGCACATTTCCACGTCTGACTACTGGGCCTATAATGACAAGTGATCAGCATGATTTTTTCAGTAAGTTATTGAAATTGAAACCTCCAGTCTTCAAAGGTGCGGAATCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTGGAGTTTGTGACTTATCAGTTTCAAGGAAACGCCAAAATATGGTGGCGGTCACATATCGAGTGTCAACCAATAGAGGCACCACCTATGACTTGGGCCTCATTCT</gDNA_template>
            <first_frame> T  *  P  I  *  Y  *  G  S  D  S  S  T  D  *  G  S  D  K  R  G  G  G  W  G  E  *  T  S  A  K  *  G  N  A  T  P  T  Y  P  R  D  D  Q  S  G  S  G  L  S  *  W  I  I  *  S  G  P  D  T  P  S  F  L  C  T  S  T  S  G  S  G  G  T  T  C  G  Y  Y  G  S  P  H  G  C  S  I  G  N  R  H  I  S  T  S  D  Y  W  A  Y  N  D  K  *  S  A  *  F  F  Q  *  V  I  E  I  E  T  S  S  L  Q  R  C  G  I  *  G  C  L  R  F  S  G  *  L  S  *  A  T  T  Q  D  G  Y  S  R  T  V  W  C  G  V  C  D  L  S  V  S  R  K  R  Q  N  M  V  A  V  T  Y  R  V  S  T  N  R  G  T  T  Y  D  L  G  L  I   </first_frame>
            <second_frame>  P  S  P  S  D  T  R  A  V  T  P  P  P  T  E  E  V  I  R  E  G  E  D  G  V  N  E  Q  V  Q  N  E  E  M  P  P  Q  P  T  P  E  M  I  N  Q  V  L  A  Y  L  S  G  L  S  D  Q  G  Q  T  P  P  V  F  S  A  P  A  P  Q  A  P  E  V  Q  H  A  A  T  M  A  P  R  M  D  V  P  L  E  I  G  T  F  P  R  L  T  T  G  P  I  M  T  S  D  Q  H  D  F  F  S  K  L  L  K  L  K  P  P  V  F  K  G  A  E  S  E  D  A  Y  D  F  L  V  D  C  H  E  L  L  H  K  M  G  I  V  E  R  F  G  V  E  F  V  T  Y  Q  F  Q  G  N  A  K  I  W  W  R  S  H  I  E  C  Q  P  I  E  A  P  P  M  T  W  A  S  F  </second_frame>
            <third_frame>   L  A  H  L  I  L  G  Q  *  L  L  H  R  L  R  K  *  *  E  R  G  R  M  G  *  M  N  K  C  K  M  R  K  C  H  P  N  L  P  Q  R  *  S  I  R  F  W  L  I  L  V  D  Y  L  I  R  A  R  H  P  Q  F  S  L  H  Q  H  L  R  L  R  R  Y  N  M  R  L  L  W  L  P  A  W  M  F  H  W  K  *  A  H  F  H  V  *  L  L  G  L  *  *  Q  V  I  S  M  I  F  S  V  S  Y  *  N  *  N  L  Q  S  S  K  V  R  N  L  R  M  L  T  I  F  W  L  T  V  M  S  Y  Y  T  R  W  V  *  *  N  G  L  V  W  S  L  *  L  I  S  F  K  E  T  P  K  Y  G  G  G  H  I  S  S  V  N  Q  *  R  H  H  L  *  L  G  P  H  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0116O16.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8921" stop="9472"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>552</number_coding_nucleotides>
                  <number_encoded_amino_acids>184</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PSPSDTRAVTPPPTEEVIREGEDGVNEQVQNEEMPPQPTPEMINQVLAYLSGLSDQGQTPPVFSAPAPQAPEVQHAATMAPRMDVPLEIGTFPRLTTGPIMTSDQHDFFSKLLKLKPPVFKGAESEDAYDFLVDCHELLHKMGIVERFGVEFVTYQFQGNAKIWWRSHIECQPIEAPPMTWASF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="9547" PGL_stop="10991"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9547" e_stop="9733"/>
            <exon e_start="10478" e_stop="10991"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.893"/>
          <exon-only e_score="0.922"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.893">
            <gDNA_exon_boundary e_start="9547" e_stop="9733" e_length="187"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="9734" i_stop="10477" i_length="744"/>
          </intron>
          <exon e_serial="2" e_score="0.922">
            <gDNA_exon_boundary e_start="10478" e_stop="10991" e_length="514"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9547" stop="9733"/>
              <exon start="10478" stop="10991"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335938" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCAAGGTAGGATGTCGGTTAATGCTTATGAGGCTAAGTTCCGTGCACTATCCAGATATGCCACTCAACTCTGTTTCAGTCCTCAAGAGCGGATTCGCCGGTTTGTGAAGGGGTTGAGGTCAGAATTGTGGATTTCGGCCTTACAGGTAGCGGCAACGGCAACATCCTTCCAAGAAGTGGTAGACTTT : GATGTGATTCTGGGTATGACTTGGCTTTCTCCGCAATTTGCAATCTTGGATTGTAATGCTAAAACGGTGATGTTAGCCAAGCCTGGGACAGACCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTCCGCATCGTCTCCTTTCTTCGTGCTAAGAAAATGATTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCGGTAGTTCGTGAGTTTCTGGATGTGTTCCCTGCGGATCTTCCTGGTATGCCACCGGATAGGGATATTGACTTCTATATTGATCTTGAACCCGGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCCGCGGAGTTAAGAGAGTTAAAAGCACAACTTCAAGAGTTATTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTGTTTGTAAAGAAGAAGGATGGGAGTTTTCGGATGTGCATAGACTACA</gDNA_template>
            <first_frame> A  R  *  D  V  G  *  C  L  *  G  *  V  P  C  T  I  Q  I  C  H  S  T  L  F  Q  S  S  R  A  D  S  P  V  C  E  G  V  E  V  R  I  V  D  F  G  L  T  G  S  G  N  G  N  I  L  P  R  S  G  R  L   : *  C  D  S  G  Y  D  L  A  F  S  A  I  C  N  L  G  L  *  C  *  N  G  D  V  S  Q  A  W  D  R  P  V  S  V  G  G  *  L  H  F  Q  S  G  P  H  R  L  L  S  S  C  *  E  N  D  *  *  R  V  F  S  F  L  G  T  S  Q  G  *  H  Y  P  S  T  F  D  *  V  G  F  G  S  S  *  V  S  G  C  V  P  C  G  S  S  W  Y  A  T  G  *  G  Y  *  L  L  Y  *  S  *  T  R  Y  S  P  H  F  Y  T  P  L  *  N  G  S  R  G  V  K  R  V  K  S  T  T  S  R  V  I  E  Q  R  L  H  *  T  K  C  I  S  L  G  C  S  G  F  V  C  K  E  E  G  W  E  F  S  D  V  H  R  L   </first_frame>
            <second_frame>  Q  G  R  M  S  V  N  A  Y  E  A  K  F  R  A  L  S  R  Y  A  T  Q  L  C  F  S  P  Q  E  R  I  R  R  F  V  K  G  L  R  S  E  L  W  I  S  A  L  Q  V  A  A  T  A  T  S  F  Q  E  V  V  D  F  :  D  V  I  L  G  M  T  W  L  S  P  Q  F  A  I  L  D  C  N  A  K  T  V  M  L  A  K  P  G  T  D  P  L  V  W  E  G  D  Y  T  S  N  P  V  R  I  V  S  F  L  R  A  K  K  M  I  S  K  G  C  L  A  F  L  A  H  L  K  D  D  T  T  Q  V  P  S  I  E  S  V  S  V  V  R  E  F  L  D  V  F  P  A  D  L  P  G  M  P  P  D  R  D  I  D  F  Y  I  D  L  E  P  G  T  R  P  I  S  I  P  P  Y  R  M  A  P  A  E  L  R  E  L  K  A  Q  L  Q  E  L  L  N  K  G  F  I  R  P  S  A  S  P  W  G  A  P  V  L  F  V  K  K  K  D  G  S  F  R  M  C  I  D  Y  </second_frame>
            <third_frame>   K  V  G  C  R  L  M  L  M  R  L  S  S  V  H  Y  P  D  M  P  L  N  S  V  S  V  L  K  S  G  F  A  G  L  *  R  G  *  G  Q  N  C  G  F  R  P  Y  R  *  R  Q  R  Q  H  P  S  K  K  W  *  T  L :   M  *  F  W  V  *  L  G  F  L  R  N  L  Q  S  W  I  V  M  L  K  R  *  C  *  P  S  L  G  Q  T  R  *  C  G  R  V  T  T  L  P  I  R  S  A  S  S  P  F  F  V  L  R  K  *  L  V  K  G  V  *  L  S  W  H  I  S  R  M  T  L  P  K  Y  L  R  L  S  R  F  R  *  F  V  S  F  W  M  C  S  L  R  I  F  L  V  C  H  R  I  G  I  L  T  S  I  L  I  L  N  P  V  L  A  P  F  L  Y  P  L  I  E  W  L  P  R  S  *  E  S  *  K  H  N  F  K  S  Y  *  T  K  A  S  L  D  Q  V  H  L  L  G  V  L  R  F  C  L  *  R  R  R  M  G  V  F  G  C  A  *  T  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0116O16.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9548" stop="9733"/>
                    <exon start="10478" stop="10990"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>699</number_coding_nucleotides>
                  <number_encoded_amino_acids>233</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QGRMSVNAYEAKFRALSRYATQLCFSPQERIRRFVKGLRSELWISALQVAATATSFQEVVDFDVILGMTWLSPQFAILDCNAKTVMLAKPGTDPLVWEGDYTSNPVRIVSFLRAKKMISKGCLAFLAHLKDDTTQVPSIESVSVVREFLDVFPADLPGMPPDRDIDFYIDLEPGTRPISIPPYRMAPAELRELKAQLQELLNKGFIRPSASPWGAPVLFVKKKDGSFRMCIDY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="13044" PGL_stop="12868"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13044" e_stop="12868"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.944"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.944">
            <gDNA_exon_boundary e_start="13044" e_stop="12868" e_length="177"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13044" stop="12868"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345909" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTACATCTCCTCCCATACAATGCTTCAAATGGAGCCATATCGATGCTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAAGAAGCTATCCCAATGACCACCAAACTCTATCACACATGCACGAAGCATATCCTCCAACACTTGAATCGTCCTTTCAGACTGGCCATCG</gDNA_template>
            <first_frame> L  H  L  L  P  Y  N  A  S  N  G  A  I  S  M  L  E  *  *  L  L  L  Y  E  N  S  A  K  G  K  K  L  S  Q  *  P  P  N  S  I  T  H  A  R  S  I  S  S  N  T  *  I  V  L  S  D  W  P  S </first_frame>
            <second_frame>  Y  I  S  S  H  T  M  L  Q  M  E  P  Y  R  C  L  S  D  S  Y  Y  C  M  K  T  P  L  R  V  R  S  Y  P  N  D  H  Q  T  L  S  H  M  H  E  A  Y  P  P  T  L  E  S  S  F  Q  T  G  H   </second_frame>
            <third_frame>   T  S  P  P  I  Q  C  F  K  W  S  H  I  D  A  *  V  I  A  I  I  V  *  K  L  R  *  G  *  E  A  I  P  M  T  T  K  L  Y  H  T  C  T  K  H  I  L  Q  H  L  N  R  P  F  R  L  A  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0116O16.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="26389" PGL_stop="18763"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="26389" e_stop="26301"/>
            <exon e_start="26225" e_stop="26109"/>
            <exon e_start="23199" e_stop="23131"/>
            <exon e_start="23019" e_stop="22915"/>
            <exon e_start="21905" e_stop="21851"/>
            <exon e_start="20694" e_stop="20621"/>
            <exon e_start="20200" e_stop="20117"/>
            <exon e_start="20043" e_stop="19903"/>
            <exon e_start="19818" e_stop="19753"/>
            <exon e_start="19336" e_stop="19227"/>
            <exon e_start="18924" e_stop="18763"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.938" acc_prob="0.487" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.885" acc_prob="0.932" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.884" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="26389" e_stop="26301" e_length="89"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.983">
            <gDNA_intron_boundary i_start="26300" i_stop="26226" i_length="75"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="26225" e_stop="26109" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="26108" i_stop="23200" i_length="2909"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="23199" e_stop="23131" e_length="69"/>
          </exon>
          <intron i_serial="3" don_prob="0.952" acc_prob="0.964">
            <gDNA_intron_boundary i_start="23130" i_stop="23020" i_length="111"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="23019" e_stop="22915" e_length="105"/>
          </exon>
          <intron i_serial="4" don_prob="0.938" acc_prob="0.487">
            <gDNA_intron_boundary i_start="22914" i_stop="21906" i_length="1009"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="21905" e_stop="21851" e_length="55"/>
          </exon>
          <intron i_serial="5" don_prob="0.952" acc_prob="0.983">
            <gDNA_intron_boundary i_start="21850" i_stop="20695" i_length="1156"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="20694" e_stop="20621" e_length="74"/>
          </exon>
          <intron i_serial="6" don_prob="0.983" acc_prob="1.000">
            <gDNA_intron_boundary i_start="20620" i_stop="20201" i_length="420"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="20200" e_stop="20117" e_length="84"/>
          </exon>
          <intron i_serial="7" don_prob="0.885" acc_prob="0.932">
            <gDNA_intron_boundary i_start="20116" i_stop="20044" i_length="73"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="20043" e_stop="19903" e_length="141"/>
          </exon>
          <intron i_serial="8" don_prob="0.992" acc_prob="0.884">
            <gDNA_intron_boundary i_start="19902" i_stop="19819" i_length="84"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="19818" e_stop="19753" e_length="66"/>
          </exon>
          <intron i_serial="9" don_prob="0.976" acc_prob="0.995">
            <gDNA_intron_boundary i_start="19752" i_stop="19337" i_length="416"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="19336" e_stop="19227" e_length="110"/>
          </exon>
          <intron i_serial="10" don_prob="0.995" acc_prob="0.999">
            <gDNA_intron_boundary i_start="19226" i_stop="18925" i_length="302"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="18924" e_stop="18763" e_length="162"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26389" stop="26301"/>
              <exon start="26225" stop="26109"/>
              <exon start="23199" stop="23131"/>
              <exon start="23019" stop="22915"/>
              <exon start="21905" stop="21851"/>
              <exon start="20694" stop="20621"/>
              <exon start="20200" stop="20117"/>
              <exon start="20043" stop="19903"/>
              <exon start="19818" stop="19753"/>
              <exon start="19336" stop="19227"/>
              <exon start="18924" stop="18763"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U323642" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGAGGCCACTCGCAGTTGCTCTCAGGCTCACCTCCCTTTACAATCCATCTCTTTCCCTCCTCAATTCTACAAAAAGTTCCAATTCACG : AAATCGAAGCCTTCCAACTCTCATCCACGCTTGGTGATTGCAAAGGCCTTGGGGACCGGCGATAATGGTGACTTTGAACATTTTACAGCTACACCTAACAAGATTTTTATGGAAGAG : GCAATTGGTGCTGAATACGGAGAAGGTTTCGAGACATTTAGACCCAATGGACTGCTCAAAGTTGATGTG : GATTTTTTAAATGATAGACTGCAAGAGGGTTTCCTGCGAAGAATCCGTTATGCGATGAAGCCTGATGAAGCTTATGGCCTGATTTTCTCTTGGGATAATGTGGTG : GCAGATTCTCGAGCTCTGATGTTGGATGCCTGGAATCAACTTGCCTCTGAAGAAG : GATTAGAGCTTCCTGAAGATGATAGTGTGCAGCGGCTGTTACTTTATGCAACTGCTGACCATATTCTGCATAAG : GCGCTGGCAGGGGAGAAGAATGAAGCTGATCAAGATAGATTGAAGACGAGACTTTCCCATCTCTATCAGGACAAGCTTCTCAAA : ATTTCAGAGCCAATTGAAGGGTTAAAAGAATGGCTGGATGCTGTATCAACTGCTCGTATCCCTTGCGCTGTTGTGTCAAGTTTTGATCGCAGAAATATGGTTGAAGCCTTAGAGCGCATGGGACTCATGAAGTACTTCCAG : GCAATTGTGACGGAGGAGGACGGAATGGAGTCTATAGCACATAGATTTCTTTCTGCAGCTGTGAAG : CTGGACAGGAAGCCATCAAAGTGTGTGGTATTTGAAGACGATCCTAGGGGCATAACTGCTGCTCACAACTGTACAATGATGGCTGTGGCACTTATTGGTGCTCACCCAGC : GTACGATTTAGGGCAAGCTGACCTAGCTGTAGGTAGCTTCAGTGAGCTTTCTGTGATAAATCTCAGGAGATTATATGCACATAAAGGCTCCAACTTTATGGACCTAGAGAAGCAAATAGCGGAAAAAGCACCGCGCAGAAGGAAGCTCACAATTGACACCAT</gDNA_template>
            <first_frame> W  R  P  L  A  V  A  L  R  L  T  S  L  Y  N  P  S  L  S  L  L  N  S  T  K  S  S  N  S  R :   N  R  S  L  P  T  L  I  H  A  W  *  L  Q  R  P  W  G  P  A  I  M  V  T  L  N  I  L  Q  L  H  L  T  R  F  L  W  K  R :   Q  L  V  L  N  T  E  K  V  S  R  H  L  D  P  M  D  C  S  K  L  M  W :   I  F  *  M  I  D  C  K  R  V  S  C  E  E  S  V  M  R  *  S  L  M  K  L  M  A  *  F  S  L  G  I  M  W  W :   Q  I  L  E  L  *  C  W  M  P  G  I  N  L  P  L  K  K  :  D  *  S  F  L  K  M  I  V  C  S  G  C  Y  F  M  Q  L  L  T  I  F  C  I  R :   R  W  Q  G  R  R  M  K  L  I  K  I  D  *  R  R  D  F  P  I  S  I  R  T  S  F  S  K :   F  Q  S  Q  L  K  G  *  K  N  G  W  M  L  Y  Q  L  L  V  S  L  A  L  L  C  Q  V  L  I  A  E  I  W  L  K  P  *  S  A  W  D  S  *  S  T  S  R :   Q  L  *  R  R  R  T  E  W  S  L  *  H  I  D  F  F  L  Q  L  *  S :   W  T  G  S  H  Q  S  V  W  Y  L  K  T  I  L  G  A  *  L  L  L  T  T  V  Q  *  W  L  W  H  L  L  V  L  T  Q   : R  T  I  *  G  K  L  T  *  L  *  V  A  S  V  S  F  L  *  *  I  S  G  D  Y  M  H  I  K  A  P  T  L  W  T  *  R  S  K  *  R  K  K  H  R  A  E  G  S  S  Q  L  T  P  </first_frame>
            <second_frame>  G  G  H  S  Q  L  L  S  G  S  P  P  F  T  I  H  L  F  P  S  S  I  L  Q  K  V  P  I  H   : E  I  E  A  F  Q  L  S  S  T  L  G  D  C  K  G  L  G  D  R  R  *  W  *  L  *  T  F  Y  S  Y  T  *  Q  D  F  Y  G  R   : G  N  W  C  *  I  R  R  R  F  R  D  I  *  T  Q  W  T  A  Q  S  *  C   : G  F  F  K  *  *  T  A  R  G  F  P  A  K  N  P  L  C  D  E  A  *  *  S  L  W  P  D  F  L  L  G  *  C  G   : G  R  F  S  S  S  D  V  G  C  L  E  S  T  C  L  *  R  R :   I  R  A  S  *  R  *  *  C  A  A  A  V  T  L  C  N  C  *  P  Y  S  A  *   : G  A  G  R  G  E  E  *  S  *  S  R  *  I  E  D  E  T  F  P  S  L  S  G  Q  A  S  Q   : N  F  R  A  N  *  R  V  K  R  M  A  G  C  C  I  N  C  S  Y  P  L  R  C  C  V  K  F  *  S  Q  K  Y  G  *  S  L  R  A  H  G  T  H  E  V  L  P   : G  N  C  D  G  G  G  R  N  G  V  Y  S  T  *  I  S  F  C  S  C  E   : A  G  Q  E  A  I  K  V  C  G  I  *  R  R  S  *  G  H  N  C  C  S  Q  L  Y  N  D  G  C  G  T  Y  W  C  S  P  S  :  V  R  F  R  A  S  *  P  S  C  R  *  L  Q  *  A  F  C  D  K  S  Q  E  I  I  C  T  *  R  L  Q  L  Y  G  P  R  E  A  N  S  G  K  S  T  A  Q  K  E  A  H  N  *  H  H </second_frame>
            <third_frame>   E  A  T  R  S  C  S  Q  A  H  L  P  L  Q  S  I  S  F  P  P  Q  F  Y  K  K  F  Q  F  T  :  K  S  K  P  S  N  S  H  P  R  L  V  I  A  K  A  L  G  T  G  D  N  G  D  F  E  H  F  T  A  T  P  N  K  I  F  M  E  E  :  A  I  G  A  E  Y  G  E  G  F  E  T  F  R  P  N  G  L  L  K  V  D  V  :  D  F  L  N  D  R  L  Q  E  G  F  L  R  R  I  R  Y  A  M  K  P  D  E  A  Y  G  L  I  F  S  W  D  N  V  V  :  A  D  S  R  A  L  M  L  D  A  W  N  Q  L  A  S  E  E   : G  L  E  L  P  E  D  D  S  V  Q  R  L  L  L  Y  A  T  A  D  H  I  L  H  K  :  A  L  A  G  E  K  N  E  A  D  Q  D  R  L  K  T  R  L  S  H  L  Y  Q  D  K  L  L  K  :  I  S  E  P  I  E  G  L  K  E  W  L  D  A  V  S  T  A  R  I  P  C  A  V  V  S  S  F  D  R  R  N  M  V  E  A  L  E  R  M  G  L  M  K  Y  F  Q  :  A  I  V  T  E  E  D  G  M  E  S  I  A  H  R  F  L  S  A  A  V  K  :  L  D  R  K  P  S  K  C  V  V  F  E  D  D  P  R  G  I  T  A  A  H  N  C  T  M  M  A  V  A  L  I  G  A  H  P  A :   Y  D  L  G  Q  A  D  L  A  V  G  S  F  S  E  L  S  V  I  N  L  R  R  L  Y  A  H  K  G  S  N  F  M  D  L  E  K  Q  I  A  E  K  A  P  R  R  R  K  L  T  I  D  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0116O16.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26387" stop="26301"/>
                    <exon start="26225" stop="26109"/>
                    <exon start="23199" stop="23131"/>
                    <exon start="23019" stop="22915"/>
                    <exon start="21905" stop="21851"/>
                    <exon start="20694" stop="20621"/>
                    <exon start="20200" stop="20117"/>
                    <exon start="20043" stop="19903"/>
                    <exon start="19818" stop="19753"/>
                    <exon start="19336" stop="19227"/>
                    <exon start="18924" stop="18765"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1068</number_coding_nucleotides>
                  <number_encoded_amino_acids>356</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EATRSCSQAHLPLQSISFPPQFYKKFQFTKSKPSNSHPRLVIAKALGTGDNGDFEHFTATPNKIFMEEAIGAEYGEGFETFRPNGLLKVDVDFLNDRLQEGFLRRIRYAMKPDEAYGLIFSWDNVVADSRALMLDAWNQLASEEGLELPEDDSVQRLLLYATADHILHKALAGEKNEADQDRLKTRLSHLYQDKLLKISEPIEGLKEWLDAVSTARIPCAVVSSFDRRNMVEALERMGLMKYFQAIVTEEDGMESIAHRFLSAAVKLDRKPSKCVVFEDDPRGITAAHNCTMMAVALIGAHPAYDLGQADLAVGSFSELSVINLRRLYAHKGSNFMDLEKQIAEKAPRRRKLTIDT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="41762" PGL_stop="38769"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="41762" e_stop="41661"/>
            <exon e_start="41577" e_stop="41419"/>
            <exon e_start="40934" e_stop="40847"/>
            <exon e_start="40702" e_stop="40613"/>
            <exon e_start="39536" e_stop="39492"/>
            <exon e_start="39392" e_stop="39298"/>
            <exon e_start="39184" e_stop="38769"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.890" e_score="1.000"/>
          <exon-intron don_prob="0.894" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.980" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="41762" e_stop="41661" e_length="102"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="41660" i_stop="41578" i_length="83"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="41577" e_stop="41419" e_length="159"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.990">
            <gDNA_intron_boundary i_start="41418" i_stop="40935" i_length="484"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="40934" e_stop="40847" e_length="88"/>
          </exon>
          <intron i_serial="3" don_prob="0.980" acc_prob="0.890">
            <gDNA_intron_boundary i_start="40846" i_stop="40703" i_length="144"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="40702" e_stop="40613" e_length="90"/>
          </exon>
          <intron i_serial="4" don_prob="0.894" acc_prob="1.000">
            <gDNA_intron_boundary i_start="40612" i_stop="39537" i_length="1076"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="39536" e_stop="39492" e_length="45"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="39491" i_stop="39393" i_length="99"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="39392" e_stop="39298" e_length="95"/>
          </exon>
          <intron i_serial="6" don_prob="0.992" acc_prob="0.980">
            <gDNA_intron_boundary i_start="39297" i_stop="39185" i_length="113"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="39184" e_stop="38769" e_length="416"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41762" stop="41661"/>
              <exon start="41577" stop="41419"/>
              <exon start="40934" stop="40847"/>
              <exon start="40702" stop="40613"/>
              <exon start="39536" stop="39492"/>
              <exon start="39392" stop="39298"/>
              <exon start="39184" stop="38769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U324856" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAGAGAGACCCATTATTCAATGATGTACCAAGCTAGAACAAGGAAAAGGGTTTTTGGTATCCAAATACATCGTGGTCCTGATGGCAGTGCTTTTCAAAAATG : TGAAACATGTGGAGTCTCAGTGGCTATTGCGTTGGCTGACATGCATGAATGTGAACCCAGAAAAAATGTAAAGAAATTGAAATGCCAACCCAGGAGCAGAACCATTGTTAAGGGGAAGAGGCTTATTCACCAACCCAGATCGGCTTTTCGAATTTTCAT : GGAGGATTTTGTGAAGAAAAACATTGACGGAAATGAGTTTGAAGTTGATAACAGAGGTTTCGAGACGTGGAAAAACATGACACGTAAG : GAGAAGATTTTGTACTTCATGAAAGCCGAGATAATTAATCTTGCACATGTGAAACTTTTGCACAAAGAGGAGAATGATATGCTATGGAGG : GTGGATGACGAGGCAGATTCAGCTGATGTTGGCAAGTATGATGAG : AACTATGAAAACTATGATCATTATGATTCTGAATCTTCTTGGGATTTGATTGATTTTGGCCTGAAGTAGACAAGAGGTTTGACACCAGTGAGAGG : GAGGGTTTGTTCCCTTGAAGGGCTGGTGTAAAATCTTGAGGATTGAACATCATTTTGATTTTTGGAGGGGTTCCATGCTTTGGACTAACGGAACATTTATGTCAGTGGCTGGCATCTGTTTTTGTGCAGAAGCCTTGTCGATTCCTACCTTATTTAAGGCAAGTCAGGTTGGTTGGCTACTGCGCGTAGTATTTGTTACTATAGGAGTTAAGATATTGAACCTCGTAAACAATCCCACTCGATAATCTTCAGTGATGCATTTCTTGAGATCAGCCAGGAGCCTTGTGTAGGATGGTTTTTTGTGAAGTTTCTTGTTTGATTTGTAGGCTTCCTACTTGTGGAATAGGGCCTTTGTGTACAGTCTCAATGAAATGAGAAGTGCTGATTTTTGCCCAGCTATTTATGGGGATAGTTTA</gDNA_template>
            <first_frame> E  R  D  P  L  F  N  D  V  P  S  *  N  K  E  K  G  F  W  Y  P  N  T  S  W  S  *  W  Q  C  F  S  K  M  :  *  N  M  W  S  L  S  G  Y  C  V  G  *  H  A  *  M  *  T  Q  K  K  C  K  E  I  E  M  P  T  Q  E  Q  N  H  C  *  G  E  E  A  Y  S  P  T  Q  I  G  F  S  N  F  H  :  G  G  F  C  E  E  K  H  *  R  K  *  V  *  S  *  *  Q  R  F  R  D  V  E  K  H  D  T  *   : G  E  D  F  V  L  H  E  S  R  D  N  *  S  C  T  C  E  T  F  A  Q  R  G  E  *  Y  A  M  E   : G  G  *  R  G  R  F  S  *  C  W  Q  V  *  *   : E  L  *  K  L  *  S  L  *  F  *  I  F  L  G  F  D  *  F  W  P  E  V  D  K  R  F  D  T  S  E  R  :  E  G  L  F  P  *  R  A  G  V  K  S  *  G  L  N  I  I  L  I  F  G  G  V  P  C  F  G  L  T  E  H  L  C  Q  W  L  A  S  V  F  V  Q  K  P  C  R  F  L  P  Y  L  R  Q  V  R  L  V  G  Y  C  A  *  Y  L  L  L  *  E  L  R  Y  *  T  S  *  T  I  P  L  D  N  L  Q  *  C  I  S  *  D  Q  P  G  A  L  C  R  M  V  F  C  E  V  S  C  L  I  C  R  L  P  T  C  G  I  G  P  L  C  T  V  S  M  K  *  E  V  L  I  F  A  Q  L  F  M  G  I  V   </first_frame>
            <second_frame>  R  E  T  H  Y  S  M  M  Y  Q  A  R  T  R  K  R  V  F  G  I  Q  I  H  R  G  P  D  G  S  A  F  Q  K  C :   E  T  C  G  V  S  V  A  I  A  L  A  D  M  H  E  C  E  P  R  K  N  V  K  K  L  K  C  Q  P  R  S  R  T  I  V  K  G  K  R  L  I  H  Q  P  R  S  A  F  R  I  F  M :   E  D  F  V  K  K  N  I  D  G  N  E  F  E  V  D  N  R  G  F  E  T  W  K  N  M  T  R  K  :  E  K  I  L  Y  F  M  K  A  E  I  I  N  L  A  H  V  K  L  L  H  K  E  E  N  D  M  L  W  R  :  V  D  D  E  A  D  S  A  D  V  G  K  Y  D  E  :  N  Y  E  N  Y  D  H  Y  D  S  E  S  S  W  D  L  I  D  F  G  L  K  *  T  R  G  L  T  P  V  R  G :   R  V  C  S  L  E  G  L  V  *  N  L  E  D  *  T  S  F  *  F  L  E  G  F  H  A  L  D  *  R  N  I  Y  V  S  G  W  H  L  F  L  C  R  S  L  V  D  S  Y  L  I  *  G  K  S  G  W  L  A  T  A  R  S  I  C  Y  Y  R  S  *  D  I  E  P  R  K  Q  S  H  S  I  I  F  S  D  A  F  L  E  I  S  Q  E  P  C  V  G  W  F  F  V  K  F  L  V  *  F  V  G  F  L  L  V  E  *  G  L  C  V  Q  S  Q  *  N  E  K  C  *  F  L  P  S  Y  L  W  G  *  F  </second_frame>
            <third_frame>   E  R  P  I  I  Q  *  C  T  K  L  E  Q  G  K  G  F  L  V  S  K  Y  I  V  V  L  M  A  V  L  F  K  N   : V  K  H  V  E  S  Q  W  L  L  R  W  L  T  C  M  N  V  N  P  E  K  M  *  R  N  *  N  A  N  P  G  A  E  P  L  L  R  G  R  G  L  F  T  N  P  D  R  L  F  E  F  S   : W  R  I  L  *  R  K  T  L  T  E  M  S  L  K  L  I  T  E  V  S  R  R  G  K  T  *  H  V  R :   R  R  F  C  T  S  *  K  P  R  *  L  I  L  H  M  *  N  F  C  T  K  R  R  M  I  C  Y  G  G :   W  M  T  R  Q  I  Q  L  M  L  A  S  M  M  R :   T  M  K  T  M  I  I  M  I  L  N  L  L  G  I  *  L  I  L  A  *  S  R  Q  E  V  *  H  Q  *  E   : G  G  F  V  P  L  K  G  W  C  K  I  L  R  I  E  H  H  F  D  F  W  R  G  S  M  L  W  T  N  G  T  F  M  S  V  A  G  I  C  F  C  A  E  A  L  S  I  P  T  L  F  K  A  S  Q  V  G  W  L  L  R  V  V  F  V  T  I  G  V  K  I  L  N  L  V  N  N  P  T  R  *  S  S  V  M  H  F  L  R  S  A  R  S  L  V  *  D  G  F  L  *  S  F  L  F  D  L  *  A  S  Y  L  W  N  R  A  F  V  Y  S  L  N  E  M  R  S  A  D  F  C  P  A  I  Y  G  D  S  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0116O16.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41761" stop="41661"/>
                    <exon start="41577" stop="41419"/>
                    <exon start="40934" stop="40847"/>
                    <exon start="40702" stop="40613"/>
                    <exon start="39536" stop="39492"/>
                    <exon start="39392" stop="39324"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>549</number_coding_nucleotides>
                  <number_encoded_amino_acids>183</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RETHYSMMYQARTRKRVFGIQIHRGPDGSAFQKCETCGVSVAIALADMHECEPRKNVKKLKCQPRSRTIVKGKRLIHQPRSAFRIFMEDFVKKNIDGNEFEVDNRGFETWKNMTRKEKILYFMKAEIINLAHVKLLHKEENDMLWRVDDEADSADVGKYDENYENYDHYDSESSWDLIDFGLK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0116O16.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="39301" stop="39298"/>
                    <exon start="39184" stop="38940"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EGGFVPLKGWCKILRIEHHFDFWRGSMLWTNGTFMSVAGICFCAEALSIPTLFKASQVGWLLRVVFVTIGVKILNLVNNPTR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="46827" PGL_stop="46653"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46827" e_stop="46653"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.983">
            <gDNA_exon_boundary e_start="46827" e_stop="46653" e_length="175"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46827" stop="46653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U344471" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTCTTTTTCTTTTTTCTGAATTTTCTTTTTTTGTTTTCTGATCTTCTCCTCTCTTGCTGAATTTTCTTCCATGTGTTTTTGCTGAATTTTTTTCTTCTTCCTTTTTTTTTGTATGTATATATATAGTGTGTAAGAGTTTATGTGGGTGCGAGGGTGAATGGAGAGGATCATGGGA</gDNA_template>
            <first_frame> V  F  F  F  F  L  N  F  L  F  L  F  S  D  L  L  L  S  C  *  I  F  F  H  V  F  L  L  N  F  F  L  L  P  F  F  L  Y  V  Y  I  *  C  V  R  V  Y  V  G  A  R  V  N  G  E  D  H  G  </first_frame>
            <second_frame>  S  F  S  F  F  *  I  F  F  F  C  F  L  I  F  S  S  L  A  E  F  S  S  M  C  F  C  *  I  F  F  F  F  L  F  F  C  M  Y  I  Y  S  V  *  E  F  M  W  V  R  G  *  M  E  R  I  M  G </second_frame>
            <third_frame>   L  F  L  F  S  E  F  S  F  F  V  F  *  S  S  P  L  L  L  N  F  L  P  C  V  F  A  E  F  F  S  S  S  F  F  F  V  C  I  Y  I  V  C  K  S  L  C  G  C  E  G  E  W  R  G  S  W   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C06HBa0116O16.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="61640" PGL_stop="60574"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61640" e_stop="60574"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="61640" e_stop="60574" e_length="1067"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61640" stop="60574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U325071" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGAACGAACAAAGGCGAGTATTAGAATGGCTGAAATGAGATTACATGCAGCCAAAAAGATGGAAGAAGCAGCTAAAGCTGTGGAAGCAATTGCTTTTGCGGAACGAAAGGCTTTACTAAATGGAAAGAAGTCTTCAACTGTTGTTCAGCACACAACTGAGGGCATCACAATTTCATATGAAGAATATTATGCTCTTGCCCGAAAAGCACAGCAAGCTGAAGAGCTATGCAAAACAAAATTTGTAGACACAAACACTATGCACAGAACTAATGAAGCAAACCAATCTGAGGTGTCTATTACAAAGAAGATGGAGGAGACTACCAAAGAAATTAGACACAACCGGAGTACTCTAGAAGAGGCTTTGGACAACGAAGATGGTACTCAAAGAAGTCGTCTTATTGAACAAGATGGTTTCTACAGGGAGAGATCAGAACACACTCAATTGCATTACTCGGGGCATAATACCTCAGTCAAATCTAAGTTCAGAAACCCTCAGTCATCTCTCACTAGTCATGGGAACCCTCGGCTAGCTGATGACAACGAAGCAGACAATGTCAATGACAAGTCAGTCCCAGTCTTTCGATCATCAATATCAATTGGAGACATACTAAGTAGGAAGCTGATTTTGCGAGATGATCATATTGTCGTGGGTAAGCATATGGAAAGCCACACCGAAAGAAAGCACGTGTCGTTTAGCCAAATGTTGAGGGAACAGAGTGGGATCATATTGAATCCCACAAAAGCTATGAAAGAAGGGGATGTACACAAGCAGTTTATTACACATAAGAAGAAGTTTGGTTTCATCCAAGTACCACTTCCCAGACAGAATAAGAAAAAGACACAGCCTTTGAACATGAGATGATCTGCCCTTCCTCTTACATCAGTCTTATACTTGTTTACTCGGCTTGCACATCTTTTCGATTTTTTTTTGCAGTGTGTATTATCTGTTGTGTTTGTGATTTGTGATTACTGAGCGTTGCCGTTTTCTCTTCATGATTGGTGTAAAGCTCCTCTTGAAGCTAACGATCTTGTGCATTTTTATGGAAAAAACATTGAGACAGAAAAT</gDNA_template>
            <first_frame> L  N  E  Q  R  R  V  L  E  W  L  K  *  D  Y  M  Q  P  K  R  W  K  K  Q  L  K  L  W  K  Q  L  L  L  R  N  E  R  L  Y  *  M  E  R  S  L  Q  L  L  F  S  T  Q  L  R  A  S  Q  F  H  M  K  N  I  M  L  L  P  E  K  H  S  K  L  K  S  Y  A  K  Q  N  L  *  T  Q  T  L  C  T  E  L  M  K  Q  T  N  L  R  C  L  L  Q  R  R  W  R  R  L  P  K  K  L  D  T  T  G  V  L  *  K  R  L  W  T  T  K  M  V  L  K  E  V  V  L  L  N  K  M  V  S  T  G  R  D  Q  N  T  L  N  C  I  T  R  G  I  I  P  Q  S  N  L  S  S  E  T  L  S  H  L  S  L  V  M  G  T  L  G  *  L  M  T  T  K  Q  T  M  S  M  T  S  Q  S  Q  S  F  D  H  Q  Y  Q  L  E  T  Y  *  V  G  S  *  F  C  E  M  I  I  L  S  W  V  S  I  W  K  A  T  P  K  E  S  T  C  R  L  A  K  C  *  G  N  R  V  G  S  Y  *  I  P  Q  K  L  *  K  K  G  M  Y  T  S  S  L  L  H  I  R  R  S  L  V  S  S  K  Y  H  F  P  D  R  I  R  K  R  H  S  L  *  T  *  D  D  L  P  F  L  L  H  Q  S  Y  T  C  L  L  G  L  H  I  F  S  I  F  F  C  S  V  Y  Y  L  L  C  L  *  F  V  I  T  E  R  C  R  F  L  F  M  I  G  V  K  L  L  L  K  L  T  I  L  C  I  F  M  E  K  T  L  R  Q  K   </first_frame>
            <second_frame>  *  T  N  K  G  E  Y  *  N  G  *  N  E  I  T  C  S  Q  K  D  G  R  S  S  *  S  C  G  S  N  C  F  C  G  T  K  G  F  T  K  W  K  E  V  F  N  C  C  S  A  H  N  *  G  H  H  N  F  I  *  R  I  L  C  S  C  P  K  S  T  A  S  *  R  A  M  Q  N  K  I  C  R  H  K  H  Y  A  Q  N  *  *  S  K  P  I  *  G  V  Y  Y  K  E  D  G  G  D  Y  Q  R  N  *  T  Q  P  E  Y  S  R  R  G  F  G  Q  R  R  W  Y  S  K  K  S  S  Y  *  T  R  W  F  L  Q  G  E  I  R  T  H  S  I  A  L  L  G  A  *  Y  L  S  Q  I  *  V  Q  K  P  S  V  I  S  H  *  S  W  E  P  S  A  S  *  *  Q  R  S  R  Q  C  Q  *  Q  V  S  P  S  L  S  I  I  N  I  N  W  R  H  T  K  *  E  A  D  F  A  R  *  S  Y  C  R  G  *  A  Y  G  K  P  H  R  K  K  A  R  V  V  *  P  N  V  E  G  T  E  W  D  H  I  E  S  H  K  S  Y  E  R  R  G  C  T  Q  A  V  Y  Y  T  *  E  E  V  W  F  H  P  S  T  T  S  Q  T  E  *  E  K  D  T  A  F  E  H  E  M  I  C  P  S  S  Y  I  S  L  I  L  V  Y  S  A  C  T  S  F  R  F  F  F  A  V  C  I  I  C  C  V  C  D  L  *  L  L  S  V  A  V  F  S  S  *  L  V  *  S  S  S  *  S  *  R  S  C  A  F  L  W  K  K  H  *  D  R  K  </second_frame>
            <third_frame>   E  R  T  K  A  S  I  R  M  A  E  M  R  L  H  A  A  K  K  M  E  E  A  A  K  A  V  E  A  I  A  F  A  E  R  K  A  L  L  N  G  K  K  S  S  T  V  V  Q  H  T  T  E  G  I  T  I  S  Y  E  E  Y  Y  A  L  A  R  K  A  Q  Q  A  E  E  L  C  K  T  K  F  V  D  T  N  T  M  H  R  T  N  E  A  N  Q  S  E  V  S  I  T  K  K  M  E  E  T  T  K  E  I  R  H  N  R  S  T  L  E  E  A  L  D  N  E  D  G  T  Q  R  S  R  L  I  E  Q  D  G  F  Y  R  E  R  S  E  H  T  Q  L  H  Y  S  G  H  N  T  S  V  K  S  K  F  R  N  P  Q  S  S  L  T  S  H  G  N  P  R  L  A  D  D  N  E  A  D  N  V  N  D  K  S  V  P  V  F  R  S  S  I  S  I  G  D  I  L  S  R  K  L  I  L  R  D  D  H  I  V  V  G  K  H  M  E  S  H  T  E  R  K  H  V  S  F  S  Q  M  L  R  E  Q  S  G  I  I  L  N  P  T  K  A  M  K  E  G  D  V  H  K  Q  F  I  T  H  K  K  K  F  G  F  I  Q  V  P  L  P  R  Q  N  K  K  K  T  Q  P  L  N  M  R  *  S  A  L  P  L  T  S  V  L  Y  L  F  T  R  L  A  H  L  F  D  F  F  L  Q  C  V  L  S  V  V  F  V  I  C  D  Y  *  A  L  P  F  S  L  H  D  W  C  K  A  P  L  E  A  N  D  L  V  H  F  Y  G  K  N  I  E  T  E  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0116O16.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61638" stop="60778"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>858</number_coding_nucleotides>
                  <number_encoded_amino_acids>286</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ERTKASIRMAEMRLHAAKKMEEAAKAVEAIAFAERKALLNGKKSSTVVQHTTEGITISYEEYYALARKAQQAEELCKTKFVDTNTMHRTNEANQSEVSITKKMEETTKEIRHNRSTLEEALDNEDGTQRSRLIEQDGFYRERSEHTQLHYSGHNTSVKSKFRNPQSSLTSHGNPRLADDNEADNVNDKSVPVFRSSISIGDILSRKLILRDDHIVVGKHMESHTERKHVSFSQMLREQSGIILNPTKAMKEGDVHKQFITHKKKFGFIQVPLPRQNKKKTQPLNMR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="72351" PGL_stop="73003"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72351" e_stop="73003"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.960"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.960">
            <gDNA_exon_boundary e_start="72351" e_stop="73003" e_length="653"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72351" stop="73003"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U340496" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGATGCAAATGAAATCTGCAGTAAGAGCATATAGTCTTGCTATTAAAAAAGAATTTCTTTGTGATCAATCCAAAAGTAAAAGTTGGAAAGTTATTTGCAAGCGTCATGAGTTAGGGTGTGATTGGATGATTAGGTTTAGAGAGATTTCAAGCGGTATGTGGAAGACAGGAAAAATGATTGAACCGCATACTTGTCTTACAGATAACTATAAGGAGGATCATTTCAATTTGAATGATAACATGATTGCCACTTCATTAATACCATATGTTATGCAAAATCCAGACATAAATATTAAGATGATCCGTGAAATTATCAAAGGAAAACATCACTATACTCCTAGTTACAGAAAAGCACAAAAAGATCGAAGAAAAGCATTTCGAATGGTTTATGGTGATTTTGAAAGTTCATTTAAGGCATTACCTCGATACATGGCTGCACTACAATTATTCAATCCAGGCACTATTATTGAGTGGGAGCATCATTCTACAACAATACAAGGTGAGCAAATTTTTAAATTTCTTTTTTGGGCTTTTAAACAGAGCATTGATGGTTTCAAAAGTTGTAGGCCGGTCATTTCTATCGACGGCACACATCTTTATGGTTTGTATGATATCAAATTGTTAATTGCGGTTGGAATTGATGCGAATGGAAAT</gDNA_template>
            <first_frame> R  C  K  *  N  L  Q  *  E  H  I  V  L  L  L  K  K  N  F  F  V  I  N  P  K  V  K  V  G  K  L  F  A  S  V  M  S  *  G  V  I  G  *  L  G  L  E  R  F  Q  A  V  C  G  R  Q  E  K  *  L  N  R  I  L  V  L  Q  I  T  I  R  R  I  I  S  I  *  M  I  T  *  L  P  L  H  *  Y  H  M  L  C  K  I  Q  T  *  I  L  R  *  S  V  K  L  S  K  E  N  I  T  I  L  L  V  T  E  K  H  K  K  I  E  E  K  H  F  E  W  F  M  V  I  L  K  V  H  L  R  H  Y  L  D  T  W  L  H  Y  N  Y  S  I  Q  A  L  L  L  S  G  S  I  I  L  Q  Q  Y  K  V  S  K  F  L  N  F  F  F  G  L  L  N  R  A  L  M  V  S  K  V  V  G  R  S  F  L  S  T  A  H  I  F  M  V  C  M  I  S  N  C  *  L  R  L  E  L  M  R  M  E   </first_frame>
            <second_frame>  D  A  N  E  I  C  S  K  S  I  *  S  C  Y  *  K  R  I  S  L  *  S  I  Q  K  *  K  L  E  S  Y  L  Q  A  S  *  V  R  V  *  L  D  D  *  V  *  R  D  F  K  R  Y  V  E  D  R  K  N  D  *  T  A  Y  L  S  Y  R  *  L  *  G  G  S  F  Q  F  E  *  *  H  D  C  H  F  I  N  T  I  C  Y  A  K  S  R  H  K  Y  *  D  D  P  *  N  Y  Q  R  K  T  S  L  Y  S  *  L  Q  K  S  T  K  R  S  K  K  S  I  S  N  G  L  W  *  F  *  K  F  I  *  G  I  T  S  I  H  G  C  T  T  I  I  Q  S  R  H  Y  Y  *  V  G  A  S  F  Y  N  N  T  R  *  A  N  F  *  I  S  F  L  G  F  *  T  E  H  *  W  F  Q  K  L  *  A  G  H  F  Y  R  R  H  T  S  L  W  F  V  *  Y  Q  I  V  N  C  G  W  N  *  C  E  W  K  </second_frame>
            <third_frame>   M  Q  M  K  S  A  V  R  A  Y  S  L  A  I  K  K  E  F  L  C  D  Q  S  K  S  K  S  W  K  V  I  C  K  R  H  E  L  G  C  D  W  M  I  R  F  R  E  I  S  S  G  M  W  K  T  G  K  M  I  E  P  H  T  C  L  T  D  N  Y  K  E  D  H  F  N  L  N  D  N  M  I  A  T  S  L  I  P  Y  V  M  Q  N  P  D  I  N  I  K  M  I  R  E  I  I  K  G  K  H  H  Y  T  P  S  Y  R  K  A  Q  K  D  R  R  K  A  F  R  M  V  Y  G  D  F  E  S  S  F  K  A  L  P  R  Y  M  A  A  L  Q  L  F  N  P  G  T  I  I  E  W  E  H  H  S  T  T  I  Q  G  E  Q  I  F  K  F  L  F  W  A  F  K  Q  S  I  D  G  F  K  S  C  R  P  V  I  S  I  D  G  T  H  L  Y  G  L  Y  D  I  K  L  L  I  A  V  G  I  D  A  N  G  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0116O16.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72353" stop="73003"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>651</number_coding_nucleotides>
                  <number_encoded_amino_acids>217</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MQMKSAVRAYSLAIKKEFLCDQSKSKSWKVICKRHELGCDWMIRFREISSGMWKTGKMIEPHTCLTDNYKEDHFNLNDNMIATSLIPYVMQNPDINIKMIREIIKGKHHYTPSYRKAQKDRRKAFRMVYGDFESSFKALPRYMAALQLFNPGTIIEWEHHSTTIQGEQIFKFLFWAFKQSIDGFKSCRPVISIDGTHLYGLYDIKLLIAVGIDANGN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="77432" PGL_stop="74637"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="77432" e_stop="75609"/>
            <exon e_start="75527" e_stop="74996"/>
            <exon e_start="74945" e_stop="74637"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.957" acc_prob="1.000" e_score="0.985"/>
          <exon-intron don_prob="0.561" acc_prob="0.000" e_score="0.988"/>
          <exon-only e_score="0.887"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="77432" e_stop="75609" e_length="1824"/>
          </exon>
          <intron i_serial="1" don_prob="0.957" acc_prob="1.000">
            <gDNA_intron_boundary i_start="75608" i_stop="75528" i_length="81"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="75527" e_stop="74996" e_length="532"/>
          </exon>
          <intron i_serial="2" don_prob="0.561" acc_prob="0.000">
            <gDNA_intron_boundary i_start="74995" i_stop="74946" i_length="50"/>
          </intron>
          <exon e_serial="3" e_score="0.887">
            <gDNA_exon_boundary e_start="74945" e_stop="74637" e_length="309"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77432" stop="76624"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U327844" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76690" stop="75609"/>
              <exon start="75527" stop="75384"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U319654" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75509" stop="74996"/>
              <exon start="74945" stop="74637"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U319653" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCTACTTTCAATCTTCCACAATCTTAAAATTCTTGTTATTCTTCAAATTTTCTAAAGTTTTTAAAAGCATTTTCTTTATAAGGTGAGTTTAAATTTATTTTATTTTTAATTTATTTTAATTAATTTTATACTTTTATATGATATTGTTGATATATTCAATCGTTTGATACTTATATTAATGTTAATTTTTATTTTTATTTTTTGTGTATAGATATGGATCCATCAAATTTATACGTACATCCTGGTCCAGTAGAGCATGATGTATTAAAAATTCAAGTTCATCATCGTTCCGAAGGAATTTGGAATGGTAGCATAAAAGAAGAGAGATGTTGCTTATATACGCGTCGTGGTGATATTGAATTTTGGCAACATTTAAAATATCATCCATTACATTCTCGCATCCTTCAATATTTTGAAAATTGTAGATTTAAAGGAATTCTTGATGTTGGATGTGTGCCGTATGACTCCGGATTAATTTCTGCTTTAATTGAAAGGTGGCGTCCGGAAACTCATACTTTTCACATGCGAACTGGCGAGGCTACCATAACTTTACAAGATATTGAAATTTTATTCGGAATGGTAGTAGATGGTAGTCCTATAATTTTAAATGGAGCTGATTCTTTAGGGATTATAGGTAGACAAGAAATGATTTTTCAATTAACAGGATGGTTACCCGATACTAGTTGTTTTTCTGGTGTTAGTAGATTGTCAACATATAAATTGATTGAGTATATCGAAGGTTTGGAAGTTATTAACGATAACTCAACTGAGCATGAAGTTCAACAAAGATTTAGATTATATTTATTATGGTTATGTGGTGGATCAATATTTCCGGATAAATCTAATAATAAGATTAATTTGGACATTTTGATTGACATGAGAAATTTAGATTTAATGTCAACTCAAGCATGGGGATCGGCCGCATTATCATATTTGTATAATTGTTTATGCCGTGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGCAGGTATACATATTTTTTGATTAAATATTTTTTATATACTAGTAATATGCACTTTTAAATTTAAGTGCATTATAAGTAATGGTGAATTTATTTATTGTAGATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCATTGCCAAAGCCTCTAAGAACCAATCAATTTGAGGCTTTAACTGCACTTGCACATAAATGGACGCGACGTAGAAATCATCAAAATGAGGCACGAACTGTAATCGGTGTGATTAGGGATGTACTTGATAATCTAACTGATGAACAGGTATTTAATATTATTAGTATCTTATACTTTTCATATTTTATTTTATTTTAAATAAGAATATATTTTTTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTATAGTTTATTTGGCAGCCTTATTCGGAAGATGTTATTAATGGATTGCCTGAGTGGTGTCGGTCAGGACAACGTGTCTGGATGGCACAGGTGCCACTGATTTATGGAATTTATCGTGAGTGGCACATGGTTGATCATGTTGTGAGACAGTTCGGTTATTTACAACATATTACTGGACCGTGTACCCAATTTTTCGAATATCATTTTAAGCGTGATAAACGATCAAAAATAAAACAAGAAGATATAGATGCATTTAACTAACACAATATTTATGGGAACAACGTCAAAATCGTATATTTCGACCTCCATTTGTAAGTGGTCAAACAGATTACTTCCGTTGGTACATGAGGCATACCCGCATGGTCATTGGAAATCCACAACATGTTGTACAAAAAGGGTATCAACACATGGCAGGAAGACATGAGGCATTA : GCTAGGGGTCATGAAATGCAGTATCGTCGAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGAAATGAGACAATATGCAGCGGAAGTCGCTCGTATTTCAATGGAGTCAATGAATGCGGCCTTTCAGGGAACGCGATTGAGCTTTGATCATGATTACAATCCTCCCACTCAATACGATGAACCACCACCAGTACAAGTATCTCGCCGATCACGACAAACAACACCGAGAGAGGGTGCTCGTCGAGGTAGAAGGACCACTAGTGAAACAGCTGATTTTTCTGCAGGGCCCTCTAACACTAATGTGGCGACTCCCGAGCCTTATTATCCCACATTTGATTTTTCTGTAAGGGCCTCTAACACTAATCCGAATTTTTCTAGTCAGCAAACAGTTGATTTTGTAACTCCGCAGGTTCCAATATCTGGGTTTGCACAATTTAGTGGTTCTCAATATGGTTTTCAACATGGTATGCGTGAATTTCCGATACATAATTCTCCATTTGGTGGAAGATTGAATTTTTCGAATGTAA : TTTTATTGCATGTTTATTTGATTATATTATGTTATATTTAGTTCTTAATAGACAAAATCCACCTCGGAGAACATCTAGGCTACACAAATCAACTAGATGTGGAACAGGCAGACACTATCAAAATGAGGAAGATTTTGAAAATGAAGATGAAAATGAAGATGAGAATGAAGATGTAGAAGATTCGGATTCAGAAGAATAATTTTTTTTATGAACCTTTATTCTAAAAGGCTGAAGATTCGAATTTTGAAATATGTAAATTTTGTTGTTTCGTGCAAGTTTGAACAAAGTAATGAGATTATGTTTGAACAA</gDNA_template>
            <first_frame> I  Y  F  Q  S  S  T  I  L  K  F  L  L  F  F  K  F  S  K  V  F  K  S  I  F  F  I  R  *  V  *  I  Y  F  I  F  N  L  F  *  L  I  L  Y  F  Y  M  I  L  L  I  Y  S  I  V  *  Y  L  Y  *  C  *  F  L  F  L  F  F  V  Y  R  Y  G  S  I  K  F  I  R  T  S  W  S  S  R  A  *  C  I  K  N  S  S  S  S  S  F  R  R  N  L  E  W  *  H  K  R  R  E  M  L  L  I  Y  A  S  W  *  Y  *  I  L  A  T  F  K  I  S  S  I  T  F  S  H  P  S  I  F  *  K  L  *  I  *  R  N  S  *  C  W  M  C  A  V  *  L  R  I  N  F  C  F  N  *  K  V  A  S  G  N  S  Y  F  S  H  A  N  W  R  G  Y  H  N  F  T  R  Y  *  N  F  I  R  N  G  S  R  W  *  S  Y  N  F  K  W  S  *  F  F  R  D  Y  R  *  T  R  N  D  F  S  I  N  R  M  V  T  R  Y  *  L  F  F  W  C  *  *  I  V  N  I  *  I  D  *  V  Y  R  R  F  G  S  Y  *  R  *  L  N  *  A  *  S  S  T  K  I  *  I  I  F  I  M  V  M  W  W  I  N  I  S  G  *  I  *  *  *  D  *  F  G  H  F  D  *  H  E  K  F  R  F  N  V  N  S  S  M  G  I  G  R  I  I  I  F  V  *  L  F  M  P  C  V  N  E  K  I  K  *  S  L  W  I  S  L  F  S  A  G  I  H  I  F  *  L  N  I  F  Y  I  L  V  I  C  T  F  K  F  K  C  I  I  S  N  G  E  F  I  Y  C  R  F  G  H  G  K  E  L  F  P  C  N  H  C  Q  S  L  *  E  P  I  N  L  R  L  *  L  H  L  H  I  N  G  R  D  V  E  I  I  K  M  R  H  E  L  *  S  V  *  L  G  M  Y  L  I  I  *  L  M  N  R  Y  L  I  L  L  V  S  Y  T  F  H  I  L  F  Y  F  K  *  E  Y  I  F  F  C  Q  C  C  F  Y  N  Y  L  T  *  L  F  F  I  V  Y  L  A  A  L  F  G  R  C  Y  *  W  I  A  *  V  V  S  V  R  T  T  C  L  D  G  T  G  A  T  D  L  W  N  L  S  *  V  A  H  G  *  S  C  C  E  T  V  R  L  F  T  T  Y  Y  W  T  V  Y  P  I  F  R  I  S  F  *  A  *  *  T  I  K  N  K  T  R  R  Y  R  C  I  *  L  T  Q  Y  L  W  E  Q  R  Q  N  R  I  F  R  P  P  F  V  S  G  Q  T  D  Y  F  R  W  Y  M  R  H  T  R  M  V  I  G  N  P  Q  H  V  V  Q  K  G  Y  Q  H  M  A  G  R  H  E  A  L  :  A  R  G  H  E  M  Q  Y  R  R  A  R  M  I  E  N  D  E  N  Q  S  N  E  M  R  Q  Y  A  A  E  V  A  R  I  S  M  E  S  M  N  A  A  F  Q  G  T  R  L  S  F  D  H  D  Y  N  P  P  T  Q  Y  D  E  P  P  P  V  Q  V  S  R  R  S  R  Q  T  T  P  R  E  G  A  R  R  G  R  R  T  T  S  E  T  A  D  F  S  A  G  P  S  N  T  N  V  A  T  P  E  P  Y  Y  P  T  F  D  F  S  V  R  A  S  N  T  N  P  N  F  S  S  Q  Q  T  V  D  F  V  T  P  Q  V  P  I  S  G  F  A  Q  F  S  G  S  Q  Y  G  F  Q  H  G  M  R  E  F  P  I  H  N  S  P  F  G  G  R  L  N  F  S  N  V   : I  L  L  H  V  Y  L  I  I  L  C  Y  I  *  F  L  I  D  K  I  H  L  G  E  H  L  G  Y  T  N  Q  L  D  V  E  Q  A  D  T  I  K  M  R  K  I  L  K  M  K  M  K  M  K  M  R  M  K  M  *  K  I  R  I  Q  K  N  N  F  F  Y  E  P  L  F  *  K  A  E  D  S  N  F  E  I  C  K  F  C  C  F  V  Q  V  *  T  K  *  *  D  Y  V  *  T  </first_frame>
            <second_frame>  S  T  F  N  L  P  Q  S  *  N  S  C  Y  S  S  N  F  L  K  F  L  K  A  F  S  L  *  G  E  F  K  F  I  L  F  L  I  Y  F  N  *  F  Y  T  F  I  *  Y  C  *  Y  I  Q  S  F  D  T  Y  I  N  V  N  F  Y  F  Y  F  L  C  I  D  M  D  P  S  N  L  Y  V  H  P  G  P  V  E  H  D  V  L  K  I  Q  V  H  H  R  S  E  G  I  W  N  G  S  I  K  E  E  R  C  C  L  Y  T  R  R  G  D  I  E  F  W  Q  H  L  K  Y  H  P  L  H  S  R  I  L  Q  Y  F  E  N  C  R  F  K  G  I  L  D  V  G  C  V  P  Y  D  S  G  L  I  S  A  L  I  E  R  W  R  P  E  T  H  T  F  H  M  R  T  G  E  A  T  I  T  L  Q  D  I  E  I  L  F  G  M  V  V  D  G  S  P  I  I  L  N  G  A  D  S  L  G  I  I  G  R  Q  E  M  I  F  Q  L  T  G  W  L  P  D  T  S  C  F  S  G  V  S  R  L  S  T  Y  K  L  I  E  Y  I  E  G  L  E  V  I  N  D  N  S  T  E  H  E  V  Q  Q  R  F  R  L  Y  L  L  W  L  C  G  G  S  I  F  P  D  K  S  N  N  K  I  N  L  D  I  L  I  D  M  R  N  L  D  L  M  S  T  Q  A  W  G  S  A  A  L  S  Y  L  Y  N  C  L  C  R  A  S  M  K  K  S  N  E  V  C  G  F  L  S  L  V  Q  V  Y  I  F  F  D  *  I  F  F  I  Y  *  *  Y  A  L  L  N  L  S  A  L  *  V  M  V  N  L  F  I  V  D  L  G  M  G  K  N  Y  S  P  A  T  I  A  K  A  S  K  N  Q  S  I  *  G  F  N  C  T  C  T  *  M  D  A  T  *  K  S  S  K  *  G  T  N  C  N  R  C  D  *  G  C  T  *  *  S  N  *  *  T  G  I  *  Y  Y  *  Y  L  I  L  F  I  F  Y  F  I  L  N  K  N  I  F  F  S  A  N  V  V  F  I  I  I  L  L  N  Y  F  L  *  F  I  W  Q  P  Y  S  E  D  V  I  N  G  L  P  E  W  C  R  S  G  Q  R  V  W  M  A  Q  V  P  L  I  Y  G  I  Y  R  E  W  H  M  V  D  H  V  V  R  Q  F  G  Y  L  Q  H  I  T  G  P  C  T  Q  F  F  E  Y  H  F  K  R  D  K  R  S  K  I  K  Q  E  D  I  D  A  F  N  *  H  N  I  Y  G  N  N  V  K  I  V  Y  F  D  L  H  L  *  V  V  K  Q  I  T  S  V  G  T  *  G  I  P  A  W  S  L  E  I  H  N  M  L  Y  K  K  G  I  N  T  W  Q  E  D  M  R  H  * :   L  G  V  M  K  C  S  I  V  E  L  G  *  L  K  M  M  K  I  N  L  M  K  *  D  N  M  Q  R  K  S  L  V  F  Q  W  S  Q  *  M  R  P  F  R  E  R  D  *  A  L  I  M  I  T  I  L  P  L  N  T  M  N  H  H  Q  Y  K  Y  L  A  D  H  D  K  Q  H  R  E  R  V  L  V  E  V  E  G  P  L  V  K  Q  L  I  F  L  Q  G  P  L  T  L  M  W  R  L  P  S  L  I  I  P  H  L  I  F  L  *  G  P  L  T  L  I  R  I  F  L  V  S  K  Q  L  I  L  *  L  R  R  F  Q  Y  L  G  L  H  N  L  V  V  L  N  M  V  F  N  M  V  C  V  N  F  R  Y  I  I  L  H  L  V  E  D  *  I  F  R  M  *  :  F  Y  C  M  F  I  *  L  Y  Y  V  I  F  S  S  *  *  T  K  S  T  S  E  N  I  *  A  T  Q  I  N  *  M  W  N  R  Q  T  L  S  K  *  G  R  F  *  K  *  R  *  K  *  R  *  E  *  R  C  R  R  F  G  F  R  R  I  I  F  F  M  N  L  Y  S  K  R  L  K  I  R  I  L  K  Y  V  N  F  V  V  S  C  K  F  E  Q  S  N  E  I  M  F  E  Q </second_frame>
            <third_frame>   L  L  S  I  F  H  N  L  K  I  L  V  I  L  Q  I  F  *  S  F  *  K  H  F  L  Y  K  V  S  L  N  L  F  Y  F  *  F  I  L  I  N  F  I  L  L  Y  D  I  V  D  I  F  N  R  L  I  L  I  L  M  L  I  F  I  F  I  F  C  V  *  I  W  I  H  Q  I  Y  T  Y  I  L  V  Q  *  S  M  M  Y  *  K  F  K  F  I  I  V  P  K  E  F  G  M  V  A  *  K  K  R  D  V  A  Y  I  R  V  V  V  I  L  N  F  G  N  I  *  N  I  I  H  Y  I  L  A  S  F  N  I  L  K  I  V  D  L  K  E  F  L  M  L  D  V  C  R  M  T  P  D  *  F  L  L  *  L  K  G  G  V  R  K  L  I  L  F  T  C  E  L  A  R  L  P  *  L  Y  K  I  L  K  F  Y  S  E  W  *  *  M  V  V  L  *  F  *  M  E  L  I  L  *  G  L  *  V  D  K  K  *  F  F  N  *  Q  D  G  Y  P  I  L  V  V  F  L  V  L  V  D  C  Q  H  I  N  *  L  S  I  S  K  V  W  K  L  L  T  I  T  Q  L  S  M  K  F  N  K  D  L  D  Y  I  Y  Y  G  Y  V  V  D  Q  Y  F  R  I  N  L  I  I  R  L  I  W  T  F  *  L  T  *  E  I  *  I  *  C  Q  L  K  H  G  D  R  P  H  Y  H  I  C  I  I  V  Y  A  V  R  Q  *  K  N  Q  M  K  F  V  D  F  S  L  *  C  R  Y  T  Y  F  L  I  K  Y  F  L  Y  T  S  N  M  H  F  *  I  *  V  H  Y  K  *  W  *  I  Y  L  L  *  I  W  A  W  E  R  I  I  P  L  Q  P  L  P  K  P  L  R  T  N  Q  F  E  A  L  T  A  L  A  H  K  W  T  R  R  R  N  H  Q  N  E  A  R  T  V  I  G  V  I  R  D  V  L  D  N  L  T  D  E  Q  V  F  N  I  I  S  I  L  Y  F  S  Y  F  I  L  F  *  I  R  I  Y  F  F  L  P  M  L  F  L  *  L  S  Y  L  I  I  F  Y  S  L  F  G  S  L  I  R  K  M  L  L  M  D  C  L  S  G  V  G  Q  D  N  V  S  G  W  H  R  C  H  *  F  M  E  F  I  V  S  G  T  W  L  I  M  L  *  D  S  S  V  I  Y  N  I  L  L  D  R  V  P  N  F  S  N  I  I  L  S  V  I  N  D  Q  K  *  N  K  K  I  *  M  H  L  T  N  T  I  F  M  G  T  T  S  K  S  Y  I  S  T  S  I  C  K  W  S  N  R  L  L  P  L  V  H  E  A  Y  P  H  G  H  W  K  S  T  T  C  C  T  K  R  V  S  T  H  G  R  K  T  *  G  I   : S  *  G  S  *  N  A  V  S  S  S  S  D  D  *  K  *  *  K  S  I  *  *  N  E  T  I  C  S  G  S  R  S  Y  F  N  G  V  N  E  C  G  L  S  G  N  A  I  E  L  *  S  *  L  Q  S  S  H  S  I  R  *  T  T  T  S  T  S  I  S  P  I  T  T  N  N  T  E  R  G  C  S  S  R  *  K  D  H  *  *  N  S  *  F  F  C  R  A  L  *  H  *  C  G  D  S  R  A  L  L  S  H  I  *  F  F  C  K  G  L  *  H  *  S  E  F  F  *  S  A  N  S  *  F  C  N  S  A  G  S  N  I  W  V  C  T  I  *  W  F  S  I  W  F  S  T  W  Y  A  *  I  S  D  T  *  F  S  I  W  W  K  I  E  F  F  E  C  N :   F  I  A  C  L  F  D  Y  I  M  L  Y  L  V  L  N  R  Q  N  P  P  R  R  T  S  R  L  H  K  S  T  R  C  G  T  G  R  H  Y  Q  N  E  E  D  F  E  N  E  D  E  N  E  D  E  N  E  D  V  E  D  S  D  S  E  E  *  F  F  L  *  T  F  I  L  K  G  *  R  F  E  F  *  N  M  *  I  L  L  F  R  A  S  L  N  K  V  M  R  L  C  L  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0116O16.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77281" stop="76406"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>873</number_coding_nucleotides>
                  <number_encoded_amino_acids>291</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YIQSFDTYINVNFYFYFLCIDMDPSNLYVHPGPVEHDVLKIQVHHRSEGIWNGSIKEERCCLYTRRGDIEFWQHLKYHPLHSRILQYFENCRFKGILDVGCVPYDSGLISALIERWRPETHTFHMRTGEATITLQDIEILFGMVVDGSPIILNGADSLGIIGRQEMIFQLTGWLPDTSCFSGVSRLSTYKLIEYIEGLEVINDNSTEHEVQQRFRLYLLWLCGGSIFPDKSNNKINLDILIDMRNLDLMSTQAWGSAALSYLYNCLCRASMKKSNEVCGFLSLVQVYIFFD*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0116O16.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75782" stop="75609"/>
                    <exon start="75527" stop="74996"/>
                    <exon start="74945" stop="74905"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>744</number_coding_nucleotides>
                  <number_encoded_amino_acids>248</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LTQYLWEQRQNRIFRPPFVSGQTDYFRWYMRHTRMVIGNPQHVVQKGYQHMAGRHEALARGHEMQYRRARMIENDENQSNEMRQYAAEVARISMESMNAAFQGTRLSFDHDYNPPTQYDEPPPVQVSRRSRQTTPREGARRGRRTTSETADFSAGPSNTNVATPEPYYPTFDFSVRASNTNPNFSSQQTVDFVTPQVPISGFAQFSGSQYGFQHGMREFPIHNSPFGGRLNFSNVILLHVYLIILCYI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0116O16.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76033" stop="75779"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FIWQPYSEDVINGLPEWCRSGQRVWMAQVPLIYGIYREWHMVDHVVRQFGYLQHITGPCTQFFEYHFKRDKRSKIKQEDIDAFN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0116O16.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76329" stop="76099"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IWAWERIIPLQPLPKPLRTNQFEALTALAHKWTRRRNHQNEARTVIGVIRDVLDNLTDEQVFNIISILYFSYFILF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="100809" PGL_stop="101328"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="100809" e_stop="101328"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.925"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.925">
            <gDNA_exon_boundary e_start="100809" e_stop="101328" e_length="520"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100809" stop="101328"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334399" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCTATACGAGGTCATGGCAACTAAGAGTAAGATTTACTTTGTGATCGAACAGGCCAAAGGTGGCGAGCTTTTCAACAAACTGACAAAGGGCAGACTCAAGGAAGACGCTGCTAGAAAGTTGTTTCAGCAACTGATCAATGCAGTTGAATTTTGCCACAGCCGAGGTGTTTATCACCGTGATCTCAAACCAGAAAATCTCCTACTGGATGAGAATGGAAACCTAAAGGTCTCAGACTTTGGTTTGAGTGCATTAGCTGAGTCTAAGCGACAAGACGGGTTACTTTACACAACCTGTGGTACACCAGCATATGTTGCTCCTGAGGTGATCGGTAGAAAAGGATATGAGGGTGCCAAAGCTGACATCTGGTCTTGTGGAGTGATTTTATTTGTCTTGTTGGCTGGTTATCTTCCATTCTATGACTCAAATCTTATTTATCTGTATAGGAAGATATGCAAGGCGGAGTACAAATGTCCTAATTGGTTCCCTCTAGAAGTGCGTAAACTTCTCTCTAGGATCTTC</gDNA_template>
            <first_frame> A  I  R  G  H  G  N  *  E  *  D  L  L  C  D  R  T  G  Q  R  W  R  A  F  Q  Q  T  D  K  G  Q  T  Q  G  R  R  C  *  K  V  V  S  A  T  D  Q  C  S  *  I  L  P  Q  P  R  C  L  S  P  *  S  Q  T  R  K  S  P  T  G  *  E  W  K  P  K  G  L  R  L  W  F  E  C  I  S  *  V  *  A  T  R  R  V  T  L  H  N  L  W  Y  T  S  I  C  C  S  *  G  D  R  *  K  R  I  *  G  C  Q  S  *  H  L  V  L  W  S  D  F  I  C  L  V  G  W  L  S  S  I  L  *  L  K  S  Y  L  S  V  *  E  D  M  Q  G  G  V  Q  M  S  *  L  V  P  S  R  S  A  *  T  S  L  *  D  L  </first_frame>
            <second_frame>  L  Y  E  V  M  A  T  K  S  K  I  Y  F  V  I  E  Q  A  K  G  G  E  L  F  N  K  L  T  K  G  R  L  K  E  D  A  A  R  K  L  F  Q  Q  L  I  N  A  V  E  F  C  H  S  R  G  V  Y  H  R  D  L  K  P  E  N  L  L  L  D  E  N  G  N  L  K  V  S  D  F  G  L  S  A  L  A  E  S  K  R  Q  D  G  L  L  Y  T  T  C  G  T  P  A  Y  V  A  P  E  V  I  G  R  K  G  Y  E  G  A  K  A  D  I  W  S  C  G  V  I  L  F  V  L  L  A  G  Y  L  P  F  Y  D  S  N  L  I  Y  L  Y  R  K  I  C  K  A  E  Y  K  C  P  N  W  F  P  L  E  V  R  K  L  L  S  R  I  F </second_frame>
            <third_frame>   Y  T  R  S  W  Q  L  R  V  R  F  T  L  *  S  N  R  P  K  V  A  S  F  S  T  N  *  Q  R  A  D  S  R  K  T  L  L  E  S  C  F  S  N  *  S  M  Q  L  N  F  A  T  A  E  V  F  I  T  V  I  S  N  Q  K  I  S  Y  W  M  R  M  E  T  *  R  S  Q  T  L  V  *  V  H  *  L  S  L  S  D  K  T  G  Y  F  T  Q  P  V  V  H  Q  H  M  L  L  L  R  *  S  V  E  K  D  M  R  V  P  K  L  T  S  G  L  V  E  *  F  Y  L  S  C  W  L  V  I  F  H  S  M  T  Q  I  L  F  I  C  I  G  R  Y  A  R  R  S  T  N  V  L  I  G  S  L  *  K  C  V  N  F  S  L  G  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C06HBa0116O16.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100810" stop="101328"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>519</number_coding_nucleotides>
                  <number_encoded_amino_acids>173</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LYEVMATKSKIYFVIEQAKGGELFNKLTKGRLKEDAARKLFQQLINAVEFCHSRGVYHRDLKPENLLLDENGNLKVSDFGLSALAESKRQDGLLYTTCGTPAYVAPEVIGRKGYEGAKADIWSCGVILFVLLAGYLPFYDSNLIYLYRKICKAEYKCPNWFPLEVRKLLSRIF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 70 chains have been computed
$ 
$ memory statistics:
$ 41128 bytes spliced alignments in total
$ 19 spliced alignments have been stored
$ 2164 bytes was the average size of a spliced alignment
$ 19072 bytes predicted gene locations in total
$ 12 predicted gene locations have been stored
$ 1589 bytes was the average size of a predicted gene location
$ 2 megabytes was the average size of the backtrace matrix
$ 88 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 14:35:05
-->
